BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017092
(377 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359486529|ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 440
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 277/374 (74%), Positives = 315/374 (84%), Gaps = 12/374 (3%)
Query: 1 MEAMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKK 60
ME MDA IS+ + G + + A+VES RVDDIF KVDKLE+RVNE+EQFYL ASKK
Sbjct: 52 MEPMDASISDTRNMETGKNQGNAAQVESLKSRVDDIFTKVDKLEQRVNEVEQFYLTASKK 111
Query: 61 QGSNSKGSSTLKDKEK--ERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQH 118
Q + SKGSS +KDK+K ERHV S++KQQQ+ASRRE AA KRM+EL+RQFGTILR ITQH
Sbjct: 112 QLNVSKGSSIVKDKDKDKERHVASVKKQQQDASRREAAAAKRMQELMRQFGTILRQITQH 171
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFK 175
KWAWPFMQPVDV+GLGL DYYEVI+KPMDFSTIK +MEAK+ YKNVREIC DVRLVFK
Sbjct: 172 KWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREICADVRLVFK 231
Query: 176 NAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAH 235
NAMKYNDER DVHVMAKTLL KFEEKWLQLLPKV EE+KRREEEEAEAQLDM LAQ+AAH
Sbjct: 232 NAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDMHLAQEAAH 291
Query: 236 AKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVA 295
AKMARD SNEL+E+D+HLD++RE++VQKCRKTSTEEKRKLGAAL+RLS EDL KALEIVA
Sbjct: 292 AKMARDISNELFEIDMHLDDIREIIVQKCRKTSTEEKRKLGAALSRLSAEDLSKALEIVA 351
Query: 296 QSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNN-------KNNNN 348
QSN FQATAEEV LD+DAQ ESTLWRLKFFVKDAL+ QG ++ + NN+
Sbjct: 352 QSNPSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEIQGKSSASMGGNNTATTTNNNHP 411
Query: 349 SATNNNKRKREICD 362
+ NN+KRK+EICD
Sbjct: 412 TTNNNSKRKKEICD 425
>gi|255577689|ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223530823|gb|EEF32687.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 391
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/395 (73%), Positives = 326/395 (82%), Gaps = 22/395 (5%)
Query: 1 MEAMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKK 60
MEA+ + I +F + GN E++ + RVD++F KVDKLE+RVNE+E FYLN +KK
Sbjct: 1 MEAITSSIPDFGSYDFGNS----VEIDGYKHRVDELFHKVDKLEQRVNEVELFYLNVNKK 56
Query: 61 QGSNSKGSS------TLKDKE-KERH-VPSIRKQQQEASRREKAAEKRMEELIRQFGTIL 112
Q S G +KD KERH VPSIRKQQQ+AS+RE AA KRM+EL+RQFGTIL
Sbjct: 57 QQQQSGGGGNSKGSSIVKDNNNKERHSVPSIRKQQQDASKREAAASKRMQELMRQFGTIL 116
Query: 113 RNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTD 169
R ITQHKWAWPFMQPVDVKGLGL DYYEVIDKPMDFSTIK QME K+ YKNVREIC D
Sbjct: 117 RQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMETKDGTGYKNVREICAD 176
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQL 229
VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE EEAEAQLDMQL
Sbjct: 177 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREMEEAEAQLDMQL 236
Query: 230 AQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGK 289
AQ+A HAKMAR+ SNELYE+D HLDELR+M+VQKCRK STEEKRKLGAALTRLSPEDL K
Sbjct: 237 AQEAVHAKMARELSNELYEIDTHLDELRDMVVQKCRKISTEEKRKLGAALTRLSPEDLTK 296
Query: 290 ALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGN-------NNNNDN 342
ALEIVAQ+N GFQATAEEV+LD+DAQ+ESTLWRLKFFVKDAL+ QG NNNN+N
Sbjct: 297 ALEIVAQNNPGFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKNAASAGGNNNNNN 356
Query: 343 NKNNNNSATNNNKRKREICDAIAKTAKKKKQKASA 377
+ N+ +NNKRK+EICDAIAKTAKK+ +KASA
Sbjct: 357 SNTTTNNNNSNNKRKKEICDAIAKTAKKRNKKASA 391
>gi|297742702|emb|CBI35336.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/365 (74%), Positives = 308/365 (84%), Gaps = 6/365 (1%)
Query: 2 EAMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQ 61
E MDA I+N V G + + +VE F VDDIF KVDKLE+RVNE+E FYL ASK+Q
Sbjct: 43 EPMDASITNVRNVEIGKHKGNTDQVEGFKSCVDDIFTKVDKLEQRVNEVELFYLTASKRQ 102
Query: 62 GSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA 121
+ KGSS LKDKE RHV S +KQQQ+ASRRE AA KRM+EL+RQFGTILR I QHKWA
Sbjct: 103 LNGYKGSSVLKDKE--RHVASAKKQQQDASRREAAAVKRMQELMRQFGTILRQIMQHKWA 160
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAM 178
PF+ PVDV+GLGL DYYEVIDKPMDFSTIK QMEAK+ YKNVREIC DVRLVFKNAM
Sbjct: 161 GPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAM 220
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM 238
KYNDER DVHVMAKTLL KFEEKWLQLLPKV EEEKRREEEEAEAQLDMQLAQ+AAHAKM
Sbjct: 221 KYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKM 280
Query: 239 ARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSN 298
AR+ SNELY++D+HL+E+REM+++KCRK STEEKRKLGAAL+RLS EDL KALEIVAQ+N
Sbjct: 281 AREISNELYDIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIVAQNN 340
Query: 299 TGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNN-NNDNNKNNNNSATNNNKRK 357
FQATAEEV+LD+DAQ+ESTLWRLKFFVKDAL+ QG ++ + +N N +ATNNNKRK
Sbjct: 341 PSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKGDNTNTTTTATNNNKRK 400
Query: 358 REICD 362
+EICD
Sbjct: 401 KEICD 405
>gi|359484096|ref|XP_003633062.1| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 377
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/363 (74%), Positives = 307/363 (84%), Gaps = 6/363 (1%)
Query: 4 MDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGS 63
MDA I+N V G + + +VE F VDDIF KVDKLE+RVNE+E FYL ASK+Q +
Sbjct: 1 MDASITNVRNVEIGKHKGNTDQVEGFKSCVDDIFTKVDKLEQRVNEVELFYLTASKRQLN 60
Query: 64 NSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWP 123
KGSS LKDKE RHV S +KQQQ+ASRRE AA KRM+EL+RQFGTILR I QHKWA P
Sbjct: 61 GYKGSSVLKDKE--RHVASAKKQQQDASRREAAAVKRMQELMRQFGTILRQIMQHKWAGP 118
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKY 180
F+ PVDV+GLGL DYYEVIDKPMDFSTIK QMEAK+ YKNVREIC DVRLVFKNAMKY
Sbjct: 119 FLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKY 178
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMAR 240
NDER DVHVMAKTLL KFEEKWLQLLPKV EEEKRREEEEAEAQLDMQLAQ+AAHAKMAR
Sbjct: 179 NDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKMAR 238
Query: 241 DTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTG 300
+ SNELY++D+HL+E+REM+++KCRK STEEKRKLGAAL+RLS EDL KALEIVAQ+N
Sbjct: 239 EISNELYDIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIVAQNNPS 298
Query: 301 FQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNN-NNDNNKNNNNSATNNNKRKRE 359
FQATAEEV+LD+DAQ+ESTLWRLKFFVKDAL+ QG ++ + +N N +ATNNNKRK+E
Sbjct: 299 FQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKGDNTNTTTTATNNNKRKKE 358
Query: 360 ICD 362
ICD
Sbjct: 359 ICD 361
>gi|147779795|emb|CAN62295.1| hypothetical protein VITISV_019973 [Vitis vinifera]
Length = 377
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/363 (74%), Positives = 306/363 (84%), Gaps = 6/363 (1%)
Query: 4 MDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGS 63
MDA I+N V G + + +VE F VDDIF KVDKLE+RVNE+E FYL ASK+Q +
Sbjct: 1 MDASITNVRNVEIGKHKGNTDQVEGFKSCVDDIFTKVDKLEQRVNEVELFYLTASKRQLN 60
Query: 64 NSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWP 123
KGSS LKDKE RHV S +KQQQ+ASRRE AA KRM+EL+RQFGTILR I QHKWA P
Sbjct: 61 GYKGSSVLKDKE--RHVASAKKQQQDASRREAAAAKRMQELMRQFGTILRQIMQHKWAGP 118
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKY 180
F+ PVDV+GLGL DYYEVIDKPMDFSTIK QMEAK+ YKNVREIC DVRLVFKNAMKY
Sbjct: 119 FLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKY 178
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMAR 240
NDER DVHVMAKTLL KFEEKWLQLLPKV EEEKRREEEEAEAQLDMQLAQ+AAHAKMAR
Sbjct: 179 NDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKMAR 238
Query: 241 DTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTG 300
+ SNELY +D+HL+E+REM+++KCRK STEEKRKLGAAL+RLS EDL KALEIVAQ+N
Sbjct: 239 EISNELYXIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIVAQNNPS 298
Query: 301 FQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNN-NNDNNKNNNNSATNNNKRKRE 359
FQATAEEV+LD+DAQ+ESTLWRLKFFVKDAL+ QG ++ + +N N +ATNNNKRK+E
Sbjct: 299 FQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKGDNTNTTTTATNNNKRKKE 358
Query: 360 ICD 362
ICD
Sbjct: 359 ICD 361
>gi|356565711|ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
Length = 738
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/368 (72%), Positives = 303/368 (82%), Gaps = 9/368 (2%)
Query: 1 MEAMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKK 60
ME A IS N + E+E F RVD+I KVDKLE++V++IE FY + +K
Sbjct: 367 METFGASISEARDAATANSNGE-NEIEGFKQRVDEIISKVDKLEQKVHDIENFYSSMNKN 425
Query: 61 QGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKW 120
Q S KG+S KDK+KE+HVPSI+KQQQ+ASRRE AA KRM++L+RQFGTILR ITQHKW
Sbjct: 426 QTSTPKGNSAAKDKDKEKHVPSIKKQQQDASRREAAASKRMQDLMRQFGTILRQITQHKW 485
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNA 177
AWPFMQPVD++GLGL DYYEVIDKPMDFSTIK QMEAK+ YK+VREIC DVRLVFKNA
Sbjct: 486 AWPFMQPVDIEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKHVREICADVRLVFKNA 545
Query: 178 MKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAK 237
MKYNDERSDVHVMAKTLL+KFEEKWLQLLPKVTEEE RREEEEAEAQL +Q+AQ+AA AK
Sbjct: 546 MKYNDERSDVHVMAKTLLSKFEEKWLQLLPKVTEEETRREEEEAEAQLALQVAQEAAQAK 605
Query: 238 MARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQS 297
MARD SNELYEVDV L+ELREM+V++ RK STEEKRKLG ALTRLSPEDL KALEIVAQ+
Sbjct: 606 MARDLSNELYEVDVILEELREMVVKRFRKMSTEEKRKLGDALTRLSPEDLSKALEIVAQN 665
Query: 298 NTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRK 357
N FQATAEEV+LDMDAQSESTLWRLKFFVK+AL+ QG N+ + N NNKRK
Sbjct: 666 NPSFQATAEEVDLDMDAQSESTLWRLKFFVKEALEVQGKNSGSMGGNEN-----QNNKRK 720
Query: 358 REICDAIA 365
RE+CDAIA
Sbjct: 721 RELCDAIA 728
>gi|224098028|ref|XP_002311109.1| global transcription factor group [Populus trichocarpa]
gi|222850929|gb|EEE88476.1| global transcription factor group [Populus trichocarpa]
Length = 370
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 281/390 (72%), Positives = 315/390 (80%), Gaps = 33/390 (8%)
Query: 1 MEAMDAPISNFTAVHAGN-P--ESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFY--- 54
MEA+ I V +GN P SD AE E F VD+I QKVDKLE+RVNE+EQFY
Sbjct: 1 MEAISPSI-----VDSGNLPIRNSD-AEAEGFKHSVDEILQKVDKLEQRVNEVEQFYSKN 54
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
+ ++ GS+ GSST+KDK+KERH+P+ A KRM+EL+RQFGTILR
Sbjct: 55 TSKKQQSGSSKGGSSTVKDKDKERHIPT--------------AAKRMQELMRQFGTILRQ 100
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVR 171
ITQHKWAWPFMQPVDVKGLGL DYYEVIDKPMDFSTIK QMEAK+ YK+VREIC DVR
Sbjct: 101 ITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKSVREICADVR 160
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQ 231
LVFKNAMKYNDERSDVHVMAKTLL KFEEKWLQ LPKVTEEEKRREEEEAEAQLDMQLAQ
Sbjct: 161 LVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQFLPKVTEEEKRREEEEAEAQLDMQLAQ 220
Query: 232 DAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKAL 291
+AAHAKMARD NELYEVD+HL+ELREM+VQKCRK STEEKRKLGAALTRLSPEDL KAL
Sbjct: 221 EAAHAKMARDLGNELYEVDMHLEELREMVVQKCRKMSTEEKRKLGAALTRLSPEDLTKAL 280
Query: 292 EIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNK----NNN 347
EIVAQ+N GFQATAEEV+LD+DAQSE+TLWRLKFFVKDAL+ QG + + + +
Sbjct: 281 EIVAQNNPGFQATAEEVDLDIDAQSETTLWRLKFFVKDALEVQGKSAASAGGRNNTTTPS 340
Query: 348 NSATNNNKRKREICDAIAKTAKKKKQKASA 377
N+ NNNKRKREICDAIAKTAKK+ +K S+
Sbjct: 341 NNNNNNNKRKREICDAIAKTAKKRSKKPSS 370
>gi|449452116|ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
gi|449485919|ref|XP_004157310.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
Length = 378
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/350 (76%), Positives = 306/350 (87%), Gaps = 8/350 (2%)
Query: 25 EVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIR 84
EV+ F +VD+IF KVD+LE+ VNEIEQFYL KKQ + +KGSS +KDK+KERHVPSI+
Sbjct: 18 EVDGFRHQVDEIFLKVDRLEQNVNEIEQFYLTLKKKQPNGNKGSSIVKDKDKERHVPSIK 77
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDK 144
KQQQEA+RRE AA KRM+EL+RQFGTILR I+QHKWAWPFMQPVDV+GLGL DYYEVIDK
Sbjct: 78 KQQQEAARREAAATKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDK 137
Query: 145 PMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
PMDFSTIK QMEAK+ YKNVREIC+DVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK
Sbjct: 138 PMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 197
Query: 202 WLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLV 261
WLQLLPKVTEEEKRRE+EEAEA LDMQLAQ+AA AKMARD SNE+YEVD+ L+ELRE++V
Sbjct: 198 WLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDMQLEELRELVV 257
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLW 321
Q CRK STEEKRKLGAALT+LSPED+ KALEIVA++N FQATAEEV+LD+DAQSESTLW
Sbjct: 258 QNCRKISTEEKRKLGAALTKLSPEDISKALEIVAENNPSFQATAEEVDLDIDAQSESTLW 317
Query: 322 RLKFFVKDALK-----SQGNNNNNDNNKNNNNSATNNNKRKREICDAIAK 366
RLKFFVKDAL+ S N+ N N+N+ +NNKRK+EICDAIA+
Sbjct: 318 RLKFFVKDALEVHAKSSASTGGGNNQNHTNSNNINSNNKRKKEICDAIAR 367
>gi|296086052|emb|CBI31493.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/369 (70%), Positives = 293/369 (79%), Gaps = 32/369 (8%)
Query: 4 MDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGS 63
MDA IS+ + G + + A+VES RVDDIF KVDKLE+RVNE+EQFYL ASKKQ +
Sbjct: 1 MDASISDTRNMETGKNQGNAAQVESLKSRVDDIFTKVDKLEQRVNEVEQFYLTASKKQLN 60
Query: 64 NSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWP 123
SK +ASRRE AA KRM+EL+RQFGTILR ITQHKWAWP
Sbjct: 61 VSK----------------------DASRREAAAAKRMQELMRQFGTILRQITQHKWAWP 98
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKY 180
FMQPVDV+GLGL DYYEVI+KPMDFSTIK +MEAK+ YKNVREIC DVRLVFKNAMKY
Sbjct: 99 FMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREICADVRLVFKNAMKY 158
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMAR 240
NDER DVHVMAKTLL KFEEKWLQLLPKV EE+KRREEEEAEAQLDM LAQ+AAHAKMAR
Sbjct: 159 NDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDMHLAQEAAHAKMAR 218
Query: 241 DTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTG 300
D SNEL+E+D+HLD++RE++VQKCRKTSTEEKRKLGAAL+RLS EDL KALEIVAQSN
Sbjct: 219 DISNELFEIDMHLDDIREIIVQKCRKTSTEEKRKLGAALSRLSAEDLSKALEIVAQSNPS 278
Query: 301 FQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNN-------KNNNNSATNN 353
FQATAEEV LD+DAQ ESTLWRLKFFVKDAL+ QG ++ + NN+ + NN
Sbjct: 279 FQATAEEVHLDIDAQRESTLWRLKFFVKDALEIQGKSSASMGGNNTATTTNNNHPTTNNN 338
Query: 354 NKRKREICD 362
+KRK+EICD
Sbjct: 339 SKRKKEICD 347
>gi|224109720|ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
gi|222864329|gb|EEF01460.1| global transcription factor group [Populus trichocarpa]
Length = 318
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/314 (79%), Positives = 275/314 (87%), Gaps = 6/314 (1%)
Query: 24 AEVESFTLRVDDIFQKVDKLEERVNEIEQFYLN---ASKKQGSNSKGSSTLKDKEKERHV 80
A+ E F VD+IFQKVDKLE+R+N +EQFYL+ + S GSS +KDK+KERHV
Sbjct: 4 ADTEGFKHSVDEIFQKVDKLEQRMNGVEQFYLDISKKQQSGSSKGGGSSIVKDKDKERHV 63
Query: 81 PSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYE 140
SIRKQQQ+AS+RE AA KRM+EL+RQFGTILR ITQHKWAWPFMQPVDVKGL L DYYE
Sbjct: 64 TSIRKQQQDASKREAAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHDYYE 123
Query: 141 VIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAK 197
VIDKPMDFSTIK QMEAK+ YKNVREI DVRLVFKNAMKYNDERSDVHVMAKTLL K
Sbjct: 124 VIDKPMDFSTIKNQMEAKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGK 183
Query: 198 FEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELR 257
FEEKWLQLLPKVTEEEKRRE+EE EA+LDMQLAQ+AAHAKMARD SNELYEVD+HL+ELR
Sbjct: 184 FEEKWLQLLPKVTEEEKRREDEEVEAKLDMQLAQEAAHAKMARDLSNELYEVDMHLEELR 243
Query: 258 EMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSE 317
+++VQKCRK STEEKRKLG ALTRLSPEDL KALEIVA+SN GFQATAEEV+LD+DAQ+E
Sbjct: 244 DIVVQKCRKMSTEEKRKLGVALTRLSPEDLTKALEIVARSNPGFQATAEEVDLDIDAQTE 303
Query: 318 STLWRLKFFVKDAL 331
STLWRLKF VKD L
Sbjct: 304 STLWRLKFLVKDVL 317
>gi|147833163|emb|CAN77592.1| hypothetical protein VITISV_020474 [Vitis vinifera]
Length = 346
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/330 (71%), Positives = 267/330 (80%), Gaps = 22/330 (6%)
Query: 42 KLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEK--ERHVPSIRKQQQEASRREKAAEK 99
+LE+RVNE+EQFYL ASKKQ + SKGSS +KDK+K ERHV S++KQQQ+ASRRE AA K
Sbjct: 14 QLEQRVNEVEQFYLTASKKQLNVSKGSSIVKDKDKDKERHVASVKKQQQDASRREAAAAK 73
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
RM+EL+RQFGTILR ITQHKWAWPFMQPVDV+GLGL DYYE Q +
Sbjct: 74 RMQELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYE-------------QRMVPD 120
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE 219
+ IC DVRLVFKNAMKYNDER DVHVMAKTLL KFEEKWLQLLPKV EE+KRREEE
Sbjct: 121 IRMSGRICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEE 180
Query: 220 EAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAAL 279
EAEAQLDM LAQ+AAHAKMARD SNELYE+D+HLD++REM+VQKCRKTSTEEKRKLGAAL
Sbjct: 181 EAEAQLDMHLAQEAAHAKMARDISNELYEIDMHLDDIREMIVQKCRKTSTEEKRKLGAAL 240
Query: 280 TRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNN 339
+RLS EDL KALEIVAQSN FQATAEEV LD+DAQ ESTLWRLKFFVKDAL+ QG ++
Sbjct: 241 SRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEIQGKSSA 300
Query: 340 NDNN-------KNNNNSATNNNKRKREICD 362
+ NN+ + NN KRK+EICD
Sbjct: 301 SMGGNNTATTTNNNHPTTNNNXKRKKEICD 330
>gi|255583928|ref|XP_002532712.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223527558|gb|EEF29679.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 401
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/380 (56%), Positives = 270/380 (71%), Gaps = 25/380 (6%)
Query: 21 SDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHV 80
SDV+E+E F +D++F KV +LE+ VN +EQFY+ A Q N K SS +KDK K++++
Sbjct: 22 SDVSELERFNRSIDELFSKVHELEQGVNLVEQFYMTAENSQPDNPKSSSIMKDKVKKKYL 81
Query: 81 PSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYE 140
+I K+QQ AS+ E AAEKRM++LI QF I ITQHKWAWPFM+PVDV L L+DYYE
Sbjct: 82 TNIEKEQQNASQSEAAAEKRMQQLIHQFAGIFYQITQHKWAWPFMEPVDVVRLCLNDYYE 141
Query: 141 V----IDKPMDFSTIKKQMEAKEYKNVREICTDVRLV--FKNAMKYNDERSDVHVMAKTL 194
V I K + + + ++ IC L+ FKNAMKYNDER DVHVMA+TL
Sbjct: 142 VKLNAISK--SYQLEQPTFTVSYHSSLIVICHFFPLIAGFKNAMKYNDERDDVHVMARTL 199
Query: 195 LAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLD 254
L KFEEKWLQLLPKV EEEKRRE+ + AQ ++LAQ+ +HA MAR+ +NEL +VD+ L+
Sbjct: 200 LEKFEEKWLQLLPKVAEEEKRREKVKVAAQSAIELAQEVSHANMARNLNNELSDVDMQLE 259
Query: 255 ELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDA 314
+LR ++VQKCR+TS EEK+KLGAALTRLSPE+L +ALEIVA N FQATA+ V+LDMD
Sbjct: 260 KLRNIVVQKCRRTSVEEKKKLGAALTRLSPENLTRALEIVADDNPSFQATAQVVDLDMDT 319
Query: 315 QSESTLWRLKFFVKDALKSQGNN------NNNDNNKNN---NNSAT--------NNNKRK 357
QSESTLWRL+ FVKDALK G N +NND NK+N NN + NNNKR+
Sbjct: 320 QSESTLWRLRVFVKDALKDMGTNAMGMGGSNNDENKDNIKINNKKSKNTAATATNNNKRR 379
Query: 358 REICDAIAKTAKKKKQKASA 377
REICDAI KT+ KK +K S
Sbjct: 380 REICDAITKTSAKKARKTSV 399
>gi|255641563|gb|ACU21055.1| unknown [Glycine max]
Length = 363
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/352 (57%), Positives = 266/352 (75%), Gaps = 4/352 (1%)
Query: 26 VESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRK 85
+E F + V+ I V+KLE++V E+EQFY + QG+NSKG S K+K +E+H+ +K
Sbjct: 12 LEPFRVSVNQILTTVNKLEKQVTEVEQFYESTDNVQGNNSKGGSLAKEKGREKHITGTKK 71
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKP 145
Q+AS E ++ KRM+EL+RQF TILR ITQHKWAWPFM PVDV+GLGL DYYE+IDKP
Sbjct: 72 PLQDASHTEASSAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKP 131
Query: 146 MDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
MDF TIK +MEAK+ Y NVREI DVRL+FKNAMKYN+E++DVHVMAKTLL KFEEKW
Sbjct: 132 MDFGTIKSKMEAKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKW 191
Query: 203 LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQ 262
LQLLPKV EEEKR+ EEEA+AQLD+QLA + +A A+D S EL E+D+HL L+EM++Q
Sbjct: 192 LQLLPKVAEEEKRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLKSLKEMVIQ 251
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
+CRK ST+EK+ L +AL +LS E+L +AL+I+A++N FQ ++ E+V LD+DAQS+ TLW
Sbjct: 252 QCRKLSTQEKKMLMSALGKLSLENLYRALDIIAETNPMFQPSSTEDVVLDLDAQSDYTLW 311
Query: 322 RLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQ 373
RLK FVKD+L+ Q N N+N NK++R+ D+ KT KKK+
Sbjct: 312 RLKAFVKDSLEEQVKVNAGAGINPNDNPDDKKNKKRRDSGDSSGKTNPKKKK 363
>gi|356526669|ref|XP_003531939.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 367
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/355 (57%), Positives = 268/355 (75%), Gaps = 4/355 (1%)
Query: 26 VESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRK 85
+E F + V+ I V+KLE++V E+EQFY + QG+NSKG S K+K +E+H+ +K
Sbjct: 12 LEPFRVSVNQILTTVNKLEKQVTEVEQFYESTDNVQGNNSKGGSLAKEKGREKHITGTKK 71
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKP 145
Q+AS E ++ KRM+EL+RQF TILR ITQHKWAWPFM PVDV+GLGL DYYE+IDKP
Sbjct: 72 PLQDASHTEASSAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKP 131
Query: 146 MDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
MDF TIK +MEAK+ Y NVREI DVRL+FKNAMKYN+E++DVHVMAKTLL KFEEKW
Sbjct: 132 MDFGTIKSKMEAKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKW 191
Query: 203 LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQ 262
LQLLPKV EEEKR+ EEEA+AQLD+QLA + +A A+D S EL E+D+HL L+EM++Q
Sbjct: 192 LQLLPKVAEEEKRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLKSLKEMVIQ 251
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
+CRK ST+EK+ L +AL +LS E+L +AL+I+A++N FQ ++ E+V LD+DAQS+ TLW
Sbjct: 252 QCRKLSTQEKKMLMSALGKLSLENLYRALDIIAETNPMFQPSSTEDVVLDLDAQSDYTLW 311
Query: 322 RLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQKAS 376
RLK FVKD+L+ Q N N+N NK++R+ D+ KT K+K+ ++
Sbjct: 312 RLKAFVKDSLEEQVKVNAGAGINPNDNPDDKKNKKRRDSGDSSGKTNPKRKKLST 366
>gi|30686240|ref|NP_181036.2| Transcription factor GTE6 [Arabidopsis thaliana]
gi|75148956|sp|Q84XV2.1|GTE1_ARATH RecName: Full=Transcription factor GTE1; AltName:
Full=Bromodomain-containing protein GTE1; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1;
AltName: Full=Protein IMBIBITION-INDUCIBLE 1
gi|27803868|gb|AAO22056.1| IMB1 [Arabidopsis thaliana]
gi|110741364|dbj|BAF02232.1| RING3 protein-like [Arabidopsis thaliana]
gi|111074406|gb|ABH04576.1| At2g34900 [Arabidopsis thaliana]
gi|330253943|gb|AEC09037.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/386 (53%), Positives = 268/386 (69%), Gaps = 45/386 (11%)
Query: 13 AVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFY--------LNASKK---- 60
AV GN ES E+E+F VD+I +V++LE++V E+E FY N SK
Sbjct: 23 AVFNGNGES---ELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGAAQTNTSKSNSGG 79
Query: 61 ------QGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
Q +NSKG+S K+K K +HV S +L+RQF T+ R
Sbjct: 80 KKIAISQPNNSKGNSAGKEKSKGKHVSS-------------------PDLMRQFATMFRQ 120
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
I QHKWAWPF++PVDVKGLGL DYY+VI+KPMD TIKK+ME+ EY NVREI DVRLVF
Sbjct: 121 IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVF 180
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAA 234
KNAM+YN+E+ DV+VMA++LL KFEEKWL ++PK+ EEEK++ +EEAE + QL +AA
Sbjct: 181 KNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAA 240
Query: 235 HAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIV 294
A+MARD SNELYE+D+ L++LRE +VQ+CRK ST+EK+ L AAL RLSPEDL KAL++V
Sbjct: 241 QAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMV 300
Query: 295 AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSAT--- 351
++SN F A A EVELD+D Q++ TLWRLK FV++ALK+ ++ N +NNNN+ T
Sbjct: 301 SESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGGTNAQNNNNTGTGEI 360
Query: 352 --NNNKRKREICDAIAKTAKKKKQKA 375
NN KR+REI DAI K + K+ +KA
Sbjct: 361 NKNNAKRRREISDAINKASIKRAKKA 386
>gi|62321808|dbj|BAD95432.1| RING3 protein-like [Arabidopsis thaliana]
Length = 386
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/386 (52%), Positives = 267/386 (69%), Gaps = 45/386 (11%)
Query: 13 AVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFY--------LNASKK---- 60
AV GN ES E+E+F VD+I +V++LE++V E+E FY N SK
Sbjct: 23 AVFNGNGES---ELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGAAQTNTSKSSSGG 79
Query: 61 ------QGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
Q +NSKG+S K+K K +HV S +L+RQF T+ R
Sbjct: 80 KKIAISQPNNSKGNSAGKEKSKGKHVSS-------------------PDLMRQFATMFRQ 120
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
I QHKWAWPF++PVDVKGLGL DYY+VI+KPMD TIKK+ME+ EY NVREI DVRLVF
Sbjct: 121 IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVF 180
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAA 234
KNAM+YN+E+ DV+VMA++LL KFEEKWL ++PK+ EEEK++ +EEAE + QL +AA
Sbjct: 181 KNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAA 240
Query: 235 HAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIV 294
A+MARD SNELYE+D+ L++LRE +VQ+CRK ST+EK+ L AAL RLSPEDL KAL++V
Sbjct: 241 QAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMV 300
Query: 295 AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSAT--- 351
++SN F A A EV LD+D Q++ TLWRLK FV++ALK+ ++ N +NNNN+ T
Sbjct: 301 SESNPSFPAGAPEVGLDIDVQTDVTLWRLKVFVQEALKAANKSSGGTNAQNNNNTGTGEI 360
Query: 352 --NNNKRKREICDAIAKTAKKKKQKA 375
NN KR+REI DAI K + K+ +KA
Sbjct: 361 NKNNAKRRREISDAINKASIKRAKKA 386
>gi|297826963|ref|XP_002881364.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327203|gb|EFH57623.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/374 (52%), Positives = 258/374 (68%), Gaps = 42/374 (11%)
Query: 25 EVESFTLRVDDIFQKVDKLEERVNEIEQFY--------LNASKK----------QGSNSK 66
E+E F VD+I +V++LE++V E+E FY N SK Q +NSK
Sbjct: 32 ELEDFGTCVDEITDRVNQLEQKVVEVEHFYSSKDGAAQTNTSKSNSGGKKVAISQPNNSK 91
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
+S K+K K +HV S +L+RQF T+ R I QHKWAWPF++
Sbjct: 92 CNSAGKEKSKGKHVSS-------------------PDLMRQFATMFRQIAQHKWAWPFLE 132
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSD 186
PVDVKGLGL DYY+VI+KPMD TIKK+ME+ EY NVREI DVRLVFKNAM+YN+E+ D
Sbjct: 133 PVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKED 192
Query: 187 VHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNEL 246
V+VMA++LL KFEEKWL ++PK+ EEEK++ +EEAE + QL +AA A+MARD SNEL
Sbjct: 193 VYVMAESLLEKFEEKWLLIMPKLVEEEKKQADEEAEKHANKQLTLEAAQAEMARDLSNEL 252
Query: 247 YEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAE 306
YE+D+ L+ LRE +VQ+CRK ST+EK+ L AAL RLSPEDL KAL++V++SN F A A
Sbjct: 253 YEIDLQLERLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAP 312
Query: 307 EVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSAT-----NNNKRKREIC 361
EVELD+D Q++ TLWRLK FV++ALK+ + N +NNNN+ T NN KR+REI
Sbjct: 313 EVELDIDVQTDVTLWRLKVFVQEALKAANKGSGGTNAQNNNNTGTGEINKNNAKRRREIS 372
Query: 362 DAIAKTAKKKKQKA 375
DAI K + K+ +KA
Sbjct: 373 DAINKASTKRAKKA 386
>gi|3033386|gb|AAC12830.1| putative RING3 protein [Arabidopsis thaliana]
Length = 400
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/400 (51%), Positives = 268/400 (67%), Gaps = 59/400 (14%)
Query: 13 AVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFY--------LNASKK---- 60
AV GN ES E+E+F VD+I +V++LE++V E+E FY N SK
Sbjct: 23 AVFNGNGES---ELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGAAQTNTSKSNSGG 79
Query: 61 ------QGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
Q +NSKG+S K+K K +HV S +L+RQF T+ R
Sbjct: 80 KKIAISQPNNSKGNSAGKEKSKGKHVSS-------------------PDLMRQFATMFRQ 120
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
I QHKWAWPF++PVDVKGLGL DYY+VI+KPMD TIKK+ME+ EY NVREI DVRLVF
Sbjct: 121 IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVF 180
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAA 234
KNAM+YN+E+ DV+VMA++LL KFEEKWL ++PK+ EEEK++ +EEAE + QL +AA
Sbjct: 181 KNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAA 240
Query: 235 HAKMARDTSNELYEVDVHLDELREMLVQKC--------------RKTSTEEKRKLGAALT 280
A+MARD SNELYE+D+ L++LRE +VQ+C RK ST+EK+ L AAL
Sbjct: 241 QAEMARDLSNELYEIDLQLEKLRESVVQRCRVRNRVFGVVLEINRKLSTQEKKGLSAALG 300
Query: 281 RLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNN 340
RLSPEDL KAL++V++SN F A A EVELD+D Q++ TLWRLK FV++ALK+ ++
Sbjct: 301 RLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGG 360
Query: 341 DNNKNNNNSAT-----NNNKRKREICDAIAKTAKKKKQKA 375
N +NNNN+ T NN KR+REI DAI K + K+ +KA
Sbjct: 361 TNAQNNNNTGTGEINKNNAKRRREISDAINKASIKRAKKA 400
>gi|357517357|ref|XP_003628967.1| Global transcription factor group [Medicago truncatula]
gi|355522989|gb|AET03443.1| Global transcription factor group [Medicago truncatula]
Length = 365
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/363 (53%), Positives = 265/363 (73%), Gaps = 9/363 (2%)
Query: 19 PESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKER 78
P ++ +E F VD+ +VD L+++V E+E +Y ++ QG++S+G S +K+K +E+
Sbjct: 8 PSANADRLEGFRNSVDEFRTQVDNLQKQVIEVEHYYESSGIFQGNSSRGGSVVKEKGREK 67
Query: 79 HVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDY 138
+ + Q+A R E AA KRM+EL+RQF TILR ITQHKWAWPF++PVDV+GLGL DY
Sbjct: 68 TLAGTKTPLQDALRTETAAGKRMQELMRQFSTILRQITQHKWAWPFLEPVDVEGLGLHDY 127
Query: 139 YEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
YE+IDKPMDF TIK +MEAK+ YKNVREI DVRL+FKNAMKYN+E+ DVHVMAKTL+
Sbjct: 128 YEIIDKPMDFGTIKNKMEAKDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLM 187
Query: 196 AKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDE 255
KFE+KWL LLPKV EEEKR+ EEEA+ Q+D+ LAQ+ +A MA+D SNEL EV + L E
Sbjct: 188 EKFEDKWLLLLPKVAEEEKRQIEEEAQVQMDIHLAQETTYADMAKDLSNELNEVGIRLME 247
Query: 256 LREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQ 315
RE ++Q CRK ST EK+ LG A+ +LSPE+L +AL++VA+ N F++TA+EV LD++AQ
Sbjct: 248 FREKVIQNCRKLSTGEKKALGKAIAKLSPENLQRALDLVAEINPSFESTADEVVLDINAQ 307
Query: 316 SESTLWRLKFFVKDALKS-QGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQK 374
S+ T+WRL FVK AL+ QG NND + +S +++RE D AK K ++
Sbjct: 308 SDYTVWRLYHFVKGALEGQQGTAVNNDTEEKRYSS-----RKRREFSDDHAKNPSKSRKL 362
Query: 375 ASA 377
+++
Sbjct: 363 STS 365
>gi|55296460|dbj|BAD68656.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
gi|55297001|dbj|BAD68476.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
Length = 360
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 249/350 (71%), Gaps = 35/350 (10%)
Query: 25 EVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIR 84
EV++F +V+D+ K D+LE RVNE+ FY KK GS +
Sbjct: 37 EVDAFRRQVEDLVSKTDQLERRVNEVVGFY--DGKKHGSGGR------------------ 76
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDK 144
+A R++ + K M +L+RQFGTI+R IT H+WA PF++PVDV GL LDDYY++I K
Sbjct: 77 ----KAGRKDSSLSKGMPDLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIITK 132
Query: 145 PMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
PMDFSTI+K+ME K+ Y NVREI +DVRL+F NAMKYNDER DVH+MAK+LL KFEEK
Sbjct: 133 PMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEEK 192
Query: 202 WLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLV 261
WLQLLPKV EE+++++EE+ + ++ + A AK+A+DT NEL E++ L+ELR+M+V
Sbjct: 193 WLQLLPKVENEERKQKDEESNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEELRQMVV 252
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLW 321
QKCRK +T EKRKLGA L LSPE+L KALE+VAQ N F+A +E+ELDMDAQSE+TLW
Sbjct: 253 QKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELELDMDAQSETTLW 312
Query: 322 RLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKK 371
RLKFFV++AL+ Q N + ++ N KRKREIC+A+A+TA K+
Sbjct: 313 RLKFFVREALERQANVASGRTDE--------NAKRKREICNALARTASKR 354
>gi|125553971|gb|EAY99576.1| hypothetical protein OsI_21551 [Oryza sativa Indica Group]
gi|125595985|gb|EAZ35765.1| hypothetical protein OsJ_20055 [Oryza sativa Japonica Group]
Length = 344
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/351 (53%), Positives = 249/351 (70%), Gaps = 35/351 (9%)
Query: 24 AEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSI 83
EV++F +V+D+ K D+LE RVNE+ FY KK GS +
Sbjct: 20 TEVDAFRRQVEDLVSKTDQLERRVNEVVGFY--DGKKHGSGGR----------------- 60
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
+A R++ + K M +L+RQFGTI+R IT H+WA PF++PVDV GL LDDYY++I
Sbjct: 61 -----KAGRKDSSLSKGMPDLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIIT 115
Query: 144 KPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
KPMDFSTI+K+ME K+ Y NVREI +DVRL+F NAMKYNDER DVH+MAK+LL KFEE
Sbjct: 116 KPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEE 175
Query: 201 KWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREML 260
KWLQLLPKV EE+++++EE+ + ++ + A AK+A+DT NEL E++ L+ELR+M+
Sbjct: 176 KWLQLLPKVENEERKQKDEESNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEELRQMV 235
Query: 261 VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTL 320
VQKCRK +T EKRKLGA L LSPE+L KALE+VAQ N F+A +E+ELDMDAQSE+TL
Sbjct: 236 VQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELELDMDAQSETTL 295
Query: 321 WRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKK 371
WRLKFFV++AL+ Q N + ++ N KRKREIC+A+A+TA K+
Sbjct: 296 WRLKFFVREALERQANVASGRTDE--------NAKRKREICNALARTASKR 338
>gi|42571057|ref|NP_973602.1| Transcription factor GTE6 [Arabidopsis thaliana]
gi|330253942|gb|AEC09036.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 276
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 169/276 (61%), Positives = 218/276 (78%), Gaps = 5/276 (1%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
+RQF T+ R I QHKWAWPF++PVDVKGLGL DYY+VI+KPMD TIKK+ME+ EY NVR
Sbjct: 1 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVR 60
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
EI DVRLVFKNAM+YN+E+ DV+VMA++LL KFEEKWL ++PK+ EEEK++ +EEAE
Sbjct: 61 EIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKH 120
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSP 284
+ QL +AA A+MARD SNELYE+D+ L++LRE +VQ+CRK ST+EK+ L AAL RLSP
Sbjct: 121 ANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSP 180
Query: 285 EDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNK 344
EDL KAL++V++SN F A A EVELD+D Q++ TLWRLK FV++ALK+ ++ N +
Sbjct: 181 EDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGGTNAQ 240
Query: 345 NNNNSAT-----NNNKRKREICDAIAKTAKKKKQKA 375
NNNN+ T NN KR+REI DAI K + K+ +KA
Sbjct: 241 NNNNTGTGEINKNNAKRRREISDAINKASIKRAKKA 276
>gi|294462729|gb|ADE76909.1| unknown [Picea sitchensis]
Length = 377
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 192/349 (55%), Positives = 250/349 (71%), Gaps = 20/349 (5%)
Query: 33 VDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASR 92
VD + KV++LE++VNE+ +F++++SK + +SK L+D+E+E+ + RKQQ EASR
Sbjct: 39 VDYMTSKVEQLEQKVNEVARFHISSSKDKIQHSKSGLVLRDREREKINLNHRKQQ-EASR 97
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
RE KRM EL+RQF TILR ITQH+WAWPFM PVDVKGLGL DY++VI KPMDF TI+
Sbjct: 98 REAGCSKRMAELMRQFSTILRQITQHRWAWPFMTPVDVKGLGLHDYHDVIKKPMDFGTIR 157
Query: 153 KQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
++M+AK+ YKNV +IC DVRLVFKNA+ YND++SDVHVMAKTL KFEEKW L PKV
Sbjct: 158 RKMDAKDATGYKNVCDICEDVRLVFKNAVTYNDDQSDVHVMAKTLSQKFEEKWKTLWPKV 217
Query: 210 TEEEKRREEEEAEA----QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCR 265
EEE RR++EEA+A +D +L+ + K+ EL E++ HL++LR+ L KCR
Sbjct: 218 NEEEARRKKEEADANSREMVDSRLSGETDLEKLG----GELDELNEHLEKLRQELAPKCR 273
Query: 266 KTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKF 325
S EEKR+LG +L +LSPEDL KAL+I+AQ N F T +EVELD+DAQ STLWRL++
Sbjct: 274 MMSVEEKRQLGESLGKLSPEDLTKALQIIAQKNPSFIPTEDEVELDIDAQDASTLWRLQY 333
Query: 326 FVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQK 374
FVK L Q K + A KRK+EICDAIAK A+K+ +K
Sbjct: 334 FVKAVLSVQA--------KTSIAKAQAKTKRKKEICDAIAKNARKRIRK 374
>gi|357118940|ref|XP_003561205.1| PREDICTED: transcription factor GTE1-like [Brachypodium distachyon]
Length = 343
Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 237/362 (65%), Gaps = 30/362 (8%)
Query: 16 AGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKE 75
AG + + E ++F +V+DI K D LE++VNE+ +FY G G S
Sbjct: 6 AGEEKPALVEADAFRRQVEDIASKADVLEKKVNEVVRFYDGKKHGSGGRKAGGSGRYAAN 65
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGL 135
H K M EL+RQFG I+R +T H WA PF++PVDV GL L
Sbjct: 66 GGSHC------------------KGMSELMRQFGGIIRTVTNHDWAEPFLKPVDVVGLQL 107
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
DDYY++I KPMDFSTI+ +ME K+ Y NVREI +DVRL+F NAMKYNDE DVH+MAK
Sbjct: 108 DDYYKIITKPMDFSTIRNKMEGKDGTKYNNVREIYSDVRLIFANAMKYNDEHHDVHIMAK 167
Query: 193 TLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVH 252
LL +FEEKWL LLPKV EE++ +EE + + +AA AK+A+DT +EL E++
Sbjct: 168 LLLERFEEKWLHLLPKVENEERKIKEEPNDVP-STNTSPEAAIAKLAKDTDDELNEINKQ 226
Query: 253 LDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDM 312
L++LR+M+VQ+CRK +T+EKRKLGA L L+P+DL KALE+VAQ N FQ + EEV+LDM
Sbjct: 227 LEDLRKMVVQRCRKMTTDEKRKLGAGLCHLTPDDLSKALEMVAQDNPSFQISGEEVDLDM 286
Query: 313 DAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKK 372
DAQ+E+TLWRLKFFV++AL+ Q K + N KRKREIC+A+AKT K+
Sbjct: 287 DAQTETTLWRLKFFVREALERQA--------KAAPDKTDENAKRKREICNALAKTNSKRI 338
Query: 373 QK 374
+K
Sbjct: 339 KK 340
>gi|326490245|dbj|BAJ84786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/352 (52%), Positives = 239/352 (67%), Gaps = 26/352 (7%)
Query: 23 VAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPS 82
V+EV+SF +VDD+ K D LE RVNE+ FY KK GS + R + S
Sbjct: 21 VSEVDSFRRQVDDLASKTDVLERRVNEVVGFY--DGKKHGSAGR-----------RAIGS 67
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVI 142
R A+ + K M +L+RQ I+R IT H+W+ PF+QPVDV GL LDDYY++I
Sbjct: 68 SR---YAANGARDSNCKGMPDLMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYYKII 124
Query: 143 DKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
KPMDFSTI+ +ME K+ YK+VREI +DVRL+F NAM YNDE DVH+MAK LL KFE
Sbjct: 125 TKPMDFSTIQNKMEGKDGTKYKSVREIYSDVRLIFTNAMTYNDELHDVHIMAKLLLEKFE 184
Query: 200 EKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREM 259
EKWLQLLPKV EE++++ E +A +DA A++A+DT +EL E++ L+ELR M
Sbjct: 185 EKWLQLLPKVENEERKQQMETNDAPTTDTSPEDAI-AQLAKDTDDELNEINKQLEELRNM 243
Query: 260 LVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSEST 319
+VQ+C+K +T+EKRKLGA L L+PED KALE+VAQ N FQ TAEE++LDMDAQSE+T
Sbjct: 244 VVQRCKKMTTDEKRKLGAGLCHLTPEDFSKALELVAQDNPDFQTTAEELDLDMDAQSETT 303
Query: 320 LWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKK 371
LWRLKFFV++AL+ Q N + N KRKR+I +A+AKTA K+
Sbjct: 304 LWRLKFFVREALERQANPAAAPGKTD------ENAKRKRDIYNALAKTASKR 349
>gi|357497929|ref|XP_003619253.1| Global transcription factor group [Medicago truncatula]
gi|355494268|gb|AES75471.1| Global transcription factor group [Medicago truncatula]
Length = 478
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 190/302 (62%), Positives = 227/302 (75%), Gaps = 31/302 (10%)
Query: 42 KLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRM 101
+LE++ +E + F+ + +KKQ SK +STLKDK+KE+HVPSI+K QQ+ASRRE AA+KRM
Sbjct: 6 QLEQKGHETDSFFSSTNKKQTDTSKNNSTLKDKDKEKHVPSIKKLQQDASRREAAAQKRM 65
Query: 102 EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE-- 159
++LIRQFG ILR I IDKPMDF+TIK Q+EA +
Sbjct: 66 QDLIRQFGPILRRI--------------------------IDKPMDFNTIKNQIEANDGT 99
Query: 160 -YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREE 218
YK+V E C DVRLVFKNAMKYNDERSDVHVMAKTL KFEEKWLQ LP+V EEE RREE
Sbjct: 100 GYKHVWEACADVRLVFKNAMKYNDERSDVHVMAKTLREKFEEKWLQFLPRVAEEETRREE 159
Query: 219 EEAEAQLDMQLAQDAAHAKMARDTSNELY--EVDVHLDELREMLVQKCRKTSTEEKRKLG 276
EEAEA+L MQ AQ+AAHAKMA+ SNEL EVD+HL+ELREM+V+KCRK STEEKR LG
Sbjct: 160 EEAEARLAMQFAQEAAHAKMAKHLSNELMLDEVDLHLEELREMVVKKCRKMSTEEKRNLG 219
Query: 277 AALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGN 336
ALT+LSP+DL +AL IV Q+N FQA A E +LD+DAQS+STLWRL FFV DAL+ Q
Sbjct: 220 IALTKLSPDDLRRALNIVTQTNPSFQANAVEADLDIDAQSQSTLWRLNFFVMDALEVQSQ 279
Query: 337 NN 338
N+
Sbjct: 280 NS 281
>gi|242091894|ref|XP_002436437.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
gi|241914660|gb|EER87804.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
Length = 346
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/354 (49%), Positives = 240/354 (67%), Gaps = 33/354 (9%)
Query: 24 AEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSI 83
+E ++F +VDD+ K D LE+RV E+ FY +
Sbjct: 21 SEADAFRRQVDDLVSKTDVLEKRVKEVVDFY----------------------DGKKHGS 58
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
++ R A + M +L+RQFG +L+ IT HK AWPF++PVDV L + DY+++I
Sbjct: 59 GGRKGGGGGRHGAYSRGMPDLMRQFGVLLKEITSHKDAWPFLKPVDVVTLHIPDYHKIIT 118
Query: 144 KPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
+PMDFSTI+K+ME K+ Y NVREIC+DVRL+F NAMKYND+++ VH+MAK+LL KFEE
Sbjct: 119 QPMDFSTIQKKMERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVVHLMAKSLLEKFEE 178
Query: 201 KWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREML 260
KWL LPKV EEKR++EEE++ +++ A AK+A+DT +EL +++ L+ELR+M+
Sbjct: 179 KWLHFLPKVESEEKRQKEEESKGVAATNTSREVAIAKLAKDTDDELNQINRKLEELRKMV 238
Query: 261 VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTL 320
V +CRK +T+EKRKLGA + LSP+DL KALEIVAQ N FQ AEEV+LDMDAQSE+TL
Sbjct: 239 VHRCRKMTTDEKRKLGAGICHLSPDDLNKALEIVAQDNPSFQTKAEEVDLDMDAQSETTL 298
Query: 321 WRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQK 374
WRLKFFV++AL+ Q N + ++ N KRKREIC+A+AKTA K+ +K
Sbjct: 299 WRLKFFVREALERQANVASGKMDE--------NAKRKREICNALAKTASKRIKK 344
>gi|194696466|gb|ACF82317.1| unknown [Zea mays]
gi|413942791|gb|AFW75440.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 241/365 (66%), Gaps = 34/365 (9%)
Query: 13 AVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLK 72
A AG P +E ++F +VDD+ K D LE RV E+ FY
Sbjct: 11 AAEAG-PHEVESEADAFRRQVDDLVSKTDVLERRVKEVADFY------------------ 51
Query: 73 DKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKG 132
+ ++ R A+ + M +L+RQFG +L+ IT HK AWPF++PVDV
Sbjct: 52 ----DGKKHGSGGRKGGGGGRYGASSRGMPDLMRQFGVLLKEITSHKDAWPFLEPVDVVT 107
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHV 189
L L DY+ +I +PMDFSTI+K+ME K+ Y NVREIC+DVRL+F NAMKYND+++ +H+
Sbjct: 108 LQLPDYHNIITQPMDFSTIQKKMERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVIHL 167
Query: 190 MAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEV 249
MAK+LL KFEEKWL LPKV EEKR++EEE++ +++ A K+A+DT +EL ++
Sbjct: 168 MAKSLLEKFEEKWLHFLPKVESEEKRQKEEESKGVAATNTSREVAIVKLAKDTDDELNQI 227
Query: 250 DVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVE 309
+ L+ELR+M+V +CRK +T+EKRKLGA + LSP+DL KALEIVAQ N FQ AEEV+
Sbjct: 228 NKKLEELRKMVVHRCRKMTTDEKRKLGAGICHLSPDDLSKALEIVAQDNPSFQTKAEEVD 287
Query: 310 LDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAK 369
LDMDAQSE+TLWRLKFFV++AL+ Q N + ++ N KRKREIC+A+AKT
Sbjct: 288 LDMDAQSETTLWRLKFFVREALERQANVASGKMDE--------NAKRKREICNALAKTTS 339
Query: 370 KKKQK 374
++ +K
Sbjct: 340 RRIKK 344
>gi|195655085|gb|ACG47010.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 176/365 (48%), Positives = 241/365 (66%), Gaps = 34/365 (9%)
Query: 13 AVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLK 72
A AG P +E ++F +VDD+ K D LE RV E+ FY
Sbjct: 11 AAEAG-PHEVESEADAFRRQVDDLVSKTDVLERRVKEVADFY------------------ 51
Query: 73 DKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKG 132
+ ++ R A+ + M +L+RQFG +L+ IT HK AWPF++PVDV
Sbjct: 52 ----DGKKHGSGGRKGGGGGRYGASSRGMPDLMRQFGVLLKEITSHKDAWPFLEPVDVVT 107
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHV 189
L L DY+ +I +PMDFSTI+K+ME K+ Y NVREIC+DVRL+F NAMKYND+++ +H+
Sbjct: 108 LQLPDYHNIITQPMDFSTIQKKMERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVIHL 167
Query: 190 MAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEV 249
MAK+LL KFEEKWL LPKV EEKR++EEE++ +++ A K+A+DT +EL ++
Sbjct: 168 MAKSLLEKFEEKWLHFLPKVESEEKRQKEEESKGVAATNTSREVAIVKLAKDTDDELNQI 227
Query: 250 DVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVE 309
+ L+ELR+M+V +CRK +T+EKRKLGA + LSP+DL KALEIVAQ N FQ AEEV+
Sbjct: 228 NRKLEELRKMVVHRCRKMTTDEKRKLGAVICHLSPDDLSKALEIVAQDNPSFQTKAEEVD 287
Query: 310 LDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAK 369
LDMDAQSE+TLWRLKFFV++AL+ Q N + ++ N KRKREIC+A+AKT
Sbjct: 288 LDMDAQSETTLWRLKFFVREALERQANVASGKMDE--------NAKRKREICNALAKTTS 339
Query: 370 KKKQK 374
++ +K
Sbjct: 340 RRIKK 344
>gi|297819940|ref|XP_002877853.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
gi|297323691|gb|EFH54112.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
Length = 371
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 228/331 (68%), Gaps = 8/331 (2%)
Query: 4 MDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGS 63
M + V G + + E RVD++ Q VD LE ++ E+E+FY S S
Sbjct: 1 MADSVPELGHVAGGGLQVFSVDAECIKQRVDEVLQWVDSLEHKLKEVEEFY---SSIGVS 57
Query: 64 NSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWP 123
NS S KD +K RHV IRK QQEA+RRE A KRM++L+RQFGTI R ITQHK AWP
Sbjct: 58 NS--GSIGKDTDKGRHVVGIRKIQQEAARREAVAAKRMQDLMRQFGTIFRQITQHKCAWP 115
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKY 180
FM PV+V+GLGL DY+EVIDKPMDFSTIK QMEAK+ YK+V ++ D+RLVF+NAM Y
Sbjct: 116 FMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVLQVYADMRLVFENAMNY 175
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMAR 240
N+E SDV+ MAK LL KFEEKW LPKV EEEK REEEE +A + LA++A+H K R
Sbjct: 176 NEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAATEALLAKEASHIKTTR 235
Query: 241 DTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTG 300
D NE+ + L++L +V++CRK + EEKR +G AL +LSP+DL K L IVAQ++
Sbjct: 236 DLGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVLGIVAQADPS 295
Query: 301 FQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
FQ AEEV ++MD E TLWRLKFFVKDAL
Sbjct: 296 FQPRAEEVSIEMDILDEPTLWRLKFFVKDAL 326
>gi|15231174|ref|NP_190796.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|75172388|sp|Q9FT54.1|GTE6_ARATH RecName: Full=Transcription factor GTE6; AltName:
Full=Bromodomain-containing protein GTE6; AltName:
Full=Protein GENERAL TRANSCRIPTION FACTOR GROUP E6;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E6
gi|10045561|emb|CAC07919.1| putative protein [Arabidopsis thaliana]
gi|332645404|gb|AEE78925.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 369
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/321 (57%), Positives = 226/321 (70%), Gaps = 8/321 (2%)
Query: 14 VHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKD 73
V G + + E RVD++ Q VD LE ++ E+E+FY S SNS S KD
Sbjct: 9 VAGGGLQGFSVDAECIKQRVDEVLQWVDSLEHKLKEVEEFY---SSIGVSNS--GSIGKD 63
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
EK RHV IRK QQEA+RRE A KRM++L+RQFGTI R ITQHK AWPFM PV+V+GL
Sbjct: 64 TEKGRHVVGIRKIQQEAARREAVAAKRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGL 123
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
GL DY+EVIDKPMDFSTIK QMEAK+ YK+V +I D+RLVF+NAM YN+E SDV+ M
Sbjct: 124 GLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSM 183
Query: 191 AKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVD 250
AK LL KFEEKW LPKV EEEK REEEE +A + LA++A+H K R+ NE+ +
Sbjct: 184 AKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEALLAKEASHIKTTRELGNEICHAN 243
Query: 251 VHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVEL 310
L++L +V++CRK + EEKR +G AL +LSP+DL K L IVAQ+N FQ AEEV +
Sbjct: 244 DELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSI 303
Query: 311 DMDAQSESTLWRLKFFVKDAL 331
+MD E TLWRLKFFVKDAL
Sbjct: 304 EMDILDEPTLWRLKFFVKDAL 324
>gi|326495086|dbj|BAJ85639.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/274 (57%), Positives = 200/274 (72%), Gaps = 11/274 (4%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE- 159
M +L+RQ I+R IT H+W+ PF+QPVDV GL LDDY+++I KPMDFSTI+ +ME K+
Sbjct: 1 MPDLMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYHKIITKPMDFSTIQNKMEGKDG 60
Query: 160 --YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
YK+VREI +DVRL+F NAM YNDE DVH+MAK LL KFEEKWLQLLPKV EE++
Sbjct: 61 TKYKSVREIYSDVRLIFNNAMTYNDEHHDVHIMAKLLLDKFEEKWLQLLPKVENEERKHV 120
Query: 218 EEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGA 277
E D + + A AK+A+DT +EL E++ L+ELR M+VQ+C+K +T+EKRKLGA
Sbjct: 121 EPNDAPTTDT--SPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGA 178
Query: 278 ALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNN 337
L L+PEDL KALE+VAQ N FQ TAEEV LDMDAQSE+TLWRLKFFV++AL+ Q N
Sbjct: 179 GLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALERQANT 238
Query: 338 NNNDNNKNNNNSATNNNKRKREICDAIAKTAKKK 371
+ N KRKR+I +A+AKTA K+
Sbjct: 239 AAAPGKTD------ENAKRKRDIYNALAKTASKR 266
>gi|334185931|ref|NP_001190072.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|332645405|gb|AEE78926.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/299 (58%), Positives = 216/299 (72%), Gaps = 8/299 (2%)
Query: 36 IFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREK 95
+ + + LE ++ E+E+FY S SNS S KD EK RHV IRK QQEA+RRE
Sbjct: 48 VLHRYELLEHKLKEVEEFY---SSIGVSNS--GSIGKDTEKGRHVVGIRKIQQEAARREA 102
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A KRM++L+RQFGTI R ITQHK AWPFM PV+V+GLGL DY+EVIDKPMDFSTIK QM
Sbjct: 103 VAAKRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQM 162
Query: 156 EAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
EAK+ YK+V +I D+RLVF+NAM YN+E SDV+ MAK LL KFEEKW LPKV EE
Sbjct: 163 EAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEE 222
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEK 272
EK REEEE +A + LA++A+H K R+ NE+ + L++L +V++CRK + EEK
Sbjct: 223 EKIREEEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEK 282
Query: 273 RKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
R +G AL +LSP+DL K L IVAQ+N FQ AEEV ++MD E TLWRLKFFVKDAL
Sbjct: 283 RNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDAL 341
>gi|356532581|ref|XP_003534850.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 578
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 226/332 (68%), Gaps = 18/332 (5%)
Query: 36 IFQKVD---KLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASR 92
+F++V LEE+V E++++Y + Q +N+K DK +E+HV ++ +Q S
Sbjct: 255 VFERVQMCASLEEQVAEVQKYY-STINDQVNNAK------DKSQEKHVIGTKRSRQGGSS 307
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
+E + M+E++ QF TI ITQH+WAWPFM PVDV+GLGL DYY++I+KPMDF TIK
Sbjct: 308 KEANSSNTMKEVMHQFSTIFHQITQHRWAWPFMDPVDVEGLGLSDYYQIIEKPMDFGTIK 367
Query: 153 KQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
++M+AK+ YKNVR+I +DV LVFKNAMKYNDE++D+H+MAKTL KFE+KWLQLLPKV
Sbjct: 368 RKMDAKDGSGYKNVRQIYSDVTLVFKNAMKYNDEKTDIHIMAKTLREKFEKKWLQLLPKV 427
Query: 210 TEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTST 269
+ E E+EEA A L +LA++AA+A M +D + L +VD L L+EM+++KCRK ST
Sbjct: 428 AQAES--EKEEARALLKAKLAEEAAYANMTKDIRHALCDVDEQLKNLKEMVIKKCRKLST 485
Query: 270 EEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKD 329
EK L L RL+ ++L KA+ I+ + + FQ A +V+LD+D QS+ LW+L FVK+
Sbjct: 486 HEKLALKKNLNRLNGDNLLKAMAIIHEIDPTFQHDAPQVDLDLDCQSDFILWKLNMFVKE 545
Query: 330 ALKSQGNNNNND---NNKNNNNSATNNNKRKR 358
AL+ Q D N+ N N NKR++
Sbjct: 546 ALEDQDKAVAEDMAVNHNVNTQDQKNTNKRRK 577
>gi|356558209|ref|XP_003547400.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 349
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/347 (46%), Positives = 226/347 (65%), Gaps = 24/347 (6%)
Query: 16 AGNPESDVAE--VESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKD 73
P +V E + SF + + KV KLEE+V E+++FY + + + KD
Sbjct: 7 VSTPSPNVIEEDLNSFWQSIYENSNKVQKLEEQVAEVQKFYSTINDQ-------VNDAKD 59
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
K +E+HV ++ QQ S RE + M+E++ QF I IT +WAWPFM+PVDV+GL
Sbjct: 60 KGREKHVIGTKRSQQGGSSREANSSNTMKEVMHQFSIIFHQITHQRWAWPFMEPVDVEGL 119
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
GL DYY++I+KPMDF TIK++M AK+ YKNVREI +DVRLVF+NAMKYN E++DVH+M
Sbjct: 120 GLHDYYQIIEKPMDFGTIKRKMNAKDGSGYKNVREIYSDVRLVFENAMKYNGEKNDVHIM 179
Query: 191 AKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVD 250
AKTLL KFE+KWLQLLPKV + E RE+EEA L+ + AQ+A +AKM +D + L +VD
Sbjct: 180 AKTLLEKFEKKWLQLLPKVAQAE--REKEEARVLLEAKRAQEATYAKMTKDIRHALCDVD 237
Query: 251 VHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVEL 310
L L+EM+++KCRK ST EK L L+RL+ +L KA+ I+ + + FQ A +V+L
Sbjct: 238 EQLKNLKEMVIKKCRKLSTHEKLALKKNLSRLNGGNLLKAMSIIHEIDPTFQHDAPQVDL 297
Query: 311 DMDAQSESTLWRLKFFVKDALKSQ----------GNNNNNDNNKNNN 347
D+D QS+ LW+L F K+AL+ Q +N N ++ KN N
Sbjct: 298 DLDRQSDFILWKLNLFTKEALEDQDKAAAEEMAVNHNVNTEDQKNTN 344
>gi|224057894|ref|XP_002299377.1| global transcription factor group [Populus trichocarpa]
gi|222846635|gb|EEE84182.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/224 (68%), Positives = 185/224 (82%), Gaps = 3/224 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREIC 167
I I QHKWAWPF++PVDV+GL L DYYEVI+KPMDF TIK +MEAK+ YKNVREI
Sbjct: 1 IAHQIAQHKWAWPFLEPVDVEGLCLHDYYEVIEKPMDFRTIKNRMEAKDGTGYKNVREIY 60
Query: 168 TDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDM 227
DVRLVFKNAMKYNDER DVHVMA+TLL KFEEKWLQLLPKV EEEKRRE+E+ Q+
Sbjct: 61 ADVRLVFKNAMKYNDERDDVHVMARTLLEKFEEKWLQLLPKVAEEEKRREKEQTATQVAT 120
Query: 228 QLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDL 287
+LA+++++A MA+D SNEL+ VD+ L+ +REM+V+ RK STEEK+KLG ALT+LS +DL
Sbjct: 121 KLAEESSYANMAQDLSNELHGVDMQLERIREMVVRNSRKISTEEKKKLGTALTQLSHQDL 180
Query: 288 GKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
+ALEIVA+ N FQATA+EV LDMD QS+ TLWRLK FV+DAL
Sbjct: 181 IRALEIVAEHNPSFQATAQEVNLDMDTQSDVTLWRLKVFVQDAL 224
>gi|388497474|gb|AFK36803.1| unknown [Lotus japonicus]
Length = 236
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/241 (62%), Positives = 189/241 (78%), Gaps = 17/241 (7%)
Query: 146 MDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
MDFSTIK +MEA++ YKNVREI DVRL+FKNAMKYN+E+ DVHVMAKTLL KFEEKW
Sbjct: 1 MDFSTIKSKMEAEDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLLEKFEEKW 60
Query: 203 LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQ 262
LQLLPKV EEEKR EEEA AQLD+QLAQ+ +A +ARD S ELY+VD+ L +L+EM++Q
Sbjct: 61 LQLLPKVAEEEKRLLEEEALAQLDIQLAQEKTYANLARDLSVELYQVDMKLKDLKEMVIQ 120
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWR 322
KCRK S +EKR LG+ALT+LS ++L +ALEIVA++N FQ++ EEV+LD+DAQS+ TLWR
Sbjct: 121 KCRKLSPQEKRILGSALTKLSHQNLNRALEIVAENNPIFQSSGEEVDLDIDAQSDYTLWR 180
Query: 323 LKFFVKDALKSQGN-------NNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQKA 375
LK FVKDAL++QG N+N DN K +N+KR+RE+ D++A T KK +K
Sbjct: 181 LKVFVKDALEAQGKVAGGVAVNDNLDNKK-------SNSKRRRELIDSLANTNIKKTRKL 233
Query: 376 S 376
S
Sbjct: 234 S 234
>gi|388498404|gb|AFK37268.1| unknown [Lotus japonicus]
Length = 236
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 187/234 (79%), Gaps = 3/234 (1%)
Query: 146 MDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
MDFSTIK +MEA++ YKNVREI DVRL+FKNAMKYN+E+ DVHVMAKTLL KFEEKW
Sbjct: 1 MDFSTIKSKMEAEDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLLEKFEEKW 60
Query: 203 LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQ 262
LQLLPKV EEEKR EEEA A+LD+QLAQ+ +A +ARD S ELY+VD+ L +L+EM++Q
Sbjct: 61 LQLLPKVAEEEKRLLEEEALARLDIQLAQEKTYANLARDLSVELYQVDMKLKDLKEMVIQ 120
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWR 322
KCRK S +EKR LG+ALT+LS ++L +ALEIVA++N FQ++ EEV+LD+DAQS+ TLWR
Sbjct: 121 KCRKLSPQEKRILGSALTKLSHQNLNRALEIVAENNPIFQSSGEEVDLDIDAQSDYTLWR 180
Query: 323 LKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQKAS 376
LK FVKDAL++QG +N ++ NN+KR+RE+ D++A T KK +K S
Sbjct: 181 LKVFVKDALEAQGKVAGGVAVNDNLDNKKNNSKRRRELIDSLANTNIKKTRKLS 234
>gi|212276108|ref|NP_001130765.1| hypothetical protein [Zea mays]
gi|194690058|gb|ACF79113.1| unknown [Zea mays]
gi|413942792|gb|AFW75441.1| hypothetical protein ZEAMMB73_593209 [Zea mays]
Length = 226
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/232 (56%), Positives = 176/232 (75%), Gaps = 11/232 (4%)
Query: 146 MDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
MDFSTI+K+ME K+ Y NVREIC+DVRL+F NAMKYND+++ +H+MAK+LL KFEEKW
Sbjct: 1 MDFSTIQKKMERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKW 60
Query: 203 LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQ 262
L LPKV EEKR++EEE++ +++ A K+A+DT +EL +++ L+ELR+M+V
Sbjct: 61 LHFLPKVESEEKRQKEEESKGVAATNTSREVAIVKLAKDTDDELNQINKKLEELRKMVVH 120
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWR 322
+CRK +T+EKRKLGA + LSP+DL KALEIVAQ N FQ AEEV+LDMDAQSE+TLWR
Sbjct: 121 RCRKMTTDEKRKLGAGICHLSPDDLSKALEIVAQDNPSFQTKAEEVDLDMDAQSETTLWR 180
Query: 323 LKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQK 374
LKFFV++AL+ Q N + ++ N KRKREIC+A+AKT ++ +K
Sbjct: 181 LKFFVREALERQANVASGKMDE--------NAKRKREICNALAKTTSRRIKK 224
>gi|168002796|ref|XP_001754099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694653|gb|EDQ81000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 215/363 (59%), Gaps = 21/363 (5%)
Query: 12 TAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQ--FYLNASKKQGSNSKGSS 69
+ V A E++V+E L+ Q+V L +V EIE+ + K S SKG S
Sbjct: 132 STVEANEVETEVSEAARNLLK-----QQVQTLTAKVEEIERKIALVTQEKNAESKSKGES 186
Query: 70 TLKDKEKERHVPSIRKQQQ---EASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
K++++ ++ K+QQ + +R + A KR +EL+ Q I R I+QHKWAWPF++
Sbjct: 187 GTGLKDRDKGCGTLNKKQQYLLDNNRGDVARSKRNQELMNQIRGIWRQISQHKWAWPFLK 246
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDE 183
PVDV+GLGL DY +VI+KPMD TIK +M+AK+ Y++V+E+C D+RLVF NAM YN E
Sbjct: 247 PVDVEGLGLHDYNDVIEKPMDLGTIKNKMDAKDTSGYQHVQEVCDDMRLVFSNAMTYNPE 306
Query: 184 RSDVHVMAKTLLAKFEEKWLQLL-PKVTEEEKRREEEEAEAQL---DMQLAQDAAHAKMA 239
SDVHVM+KTL KFEEKW L+ PK+ EE + ++E+ E QL MQ+ ++ K+
Sbjct: 307 GSDVHVMSKTLSDKFEEKWKALIEPKLHFEESKTQQEDNEVQLKEAGMQVVEEIDTKKLT 366
Query: 240 RDTSNELYEVDVHLDELREMLVQKC-RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSN 298
+L E+D L++L+ C R S EEKR LG L +L PE+L ++I+AQ N
Sbjct: 367 EQYLLQLEELDKQLEDLKRQAAPTCSRAMSIEEKRHLGQNLGKLPPENLSHVIQIIAQRN 426
Query: 299 TGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSAT---NNNK 355
F ++EVE+D+DAQ +TLWRL+ +V+ L G N+ S N N
Sbjct: 427 PSFNINSDEVEVDIDAQDPATLWRLQRYVQAVLSGSGARQTTARNQPTKRSCGYVQNKNS 486
Query: 356 RKR 358
KR
Sbjct: 487 SKR 489
>gi|357490537|ref|XP_003615556.1| Bromodomain-containing protein [Medicago truncatula]
gi|355516891|gb|AES98514.1| Bromodomain-containing protein [Medicago truncatula]
Length = 322
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 199/326 (61%), Gaps = 34/326 (10%)
Query: 39 KVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAE 98
+V+KL ++VN++EQFY + +Q K K R P ++ A +R A+E
Sbjct: 28 QVNKLGKQVNDVEQFYQSTDVQQNDC---------KYKGREKPPTGSKK--ALKR--ASE 74
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
E+ F I + KWAWPF+ PVDV+GLGL DYY++I+KPMDFSTIK +MEAK
Sbjct: 75 DMQAEMSDAFS--FSQIAKDKWAWPFLDPVDVEGLGLYDYYQIIEKPMDFSTIKIRMEAK 132
Query: 159 E---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR 215
+ YKNVREI DVRL+FKNAMKYNDE++DVHVMAKTLL KFE
Sbjct: 133 DGSGYKNVREIYADVRLIFKNAMKYNDEKNDVHVMAKTLLEKFENDL------------- 179
Query: 216 REEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKL 275
+EEA +L+ +LAQ+A +A M R+ S EL +VD+ L L+ + +CRK S EK L
Sbjct: 180 -SKEEAHEELNKRLAQEATYANMTRELSTELSKVDMALRSLKTTAISQCRKLSHPEKLIL 238
Query: 276 GAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQG 335
A T+LSP+++ KALEIV +SN F+ + V LD+D+QS+ TL+RL FVK+ L+ Q
Sbjct: 239 ANAFTKLSPDNIVKALEIVKESNPNFKDRIDMVTLDLDSQSDYTLFRLHMFVKNTLEVQ- 297
Query: 336 NNNNNDNNKNNNNSATNNNKRKREIC 361
+ N +N NN +KR I
Sbjct: 298 -EGTSVINHEDNIEEMKNNAKKRRIV 322
>gi|302794995|ref|XP_002979261.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
gi|300153029|gb|EFJ19669.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
Length = 700
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 201/326 (61%), Gaps = 29/326 (8%)
Query: 31 LRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQ-E 89
++V ++ KV+ +E +V++I L + + T+ D ++E+ V +I+KQ+ E
Sbjct: 105 VQVTEMNSKVEDMERQVSDI----LRMRRASLKDRPVGITVTDDDREKAVAAIKKQRALE 160
Query: 90 ASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFS 149
+RRE KR ++ +R F ILR +TQHKWAWPFMQPVDV+GL L DYY+VI +PMDF
Sbjct: 161 NARREALHTKRAQDHLRIFSNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFR 220
Query: 150 TIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-LQL 205
TI+++MEAK+ Y++V+EI DVRLVF NAM YN+ +DV+VMAKTL KFEEK+ L
Sbjct: 221 TIREKMEAKDGSGYRSVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVL 280
Query: 206 LPKVTEEEKRREEEEAEAQLDMQLAQDAAHA----KMARDTSNELYEVDVHLDEL----- 256
PK+ EE +R++E E ++ AA +MA + +L ++ L+E+
Sbjct: 281 EPKLLEEGAKRKQEMVELEVHEGEEAKAAEEVALDRMAHEICKKLNNLEDELEEIKINAT 340
Query: 257 ---REML--------VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATA 305
R+ML ++ CR S EEKR+LG +L RL P L + ++I+A++N F A
Sbjct: 341 SKYRQMLDGFSSYSYLRVCRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAV 400
Query: 306 EEVELDMDAQSESTLWRLKFFVKDAL 331
EVE+D+DA TLW+L +V+ L
Sbjct: 401 AEVEVDIDALDTGTLWQLHCYVQMVL 426
>gi|167999165|ref|XP_001752288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696683|gb|EDQ83021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/258 (44%), Positives = 161/258 (62%), Gaps = 19/258 (7%)
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YKNVREICTDVR 171
I+QHKWAWPFM+PVDVKGLGL DYY+VI+KPMD TIK +++ K+ Y++V+E+C DVR
Sbjct: 2 ISQHKWAWPFMKPVDVKGLGLHDYYDVIEKPMDLGTIKNKLDVKDGLGYQHVQEVCDDVR 61
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLD---MQ 228
LVF NAM YN E SDV+VM+KTL KFEEKW L+ +EE +R +++E Q + +
Sbjct: 62 LVFSNAMTYNPEGSDVYVMSKTLSDKFEEKWKTLIEPKLQEELKRSHDDSEVQANEGGVP 121
Query: 229 LAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKT-----STEEKRKLGAALTRLS 283
+ ++ K+ E Y + V LD ++ + KCRK S EEKR LG +L RL
Sbjct: 122 VVEEIDTEKVI-----EQYALQVSLDCSQDCALSKCRKIMTRAMSVEEKRHLGQSLGRLP 176
Query: 284 PEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQG---NNNNN 340
P++L ++I+AQ N F ++EVE+D+DAQ +TLWRL+ +V+ L +
Sbjct: 177 PDNLSHVIQIIAQKNPSFNINSDEVEVDIDAQDPATLWRLQRYVQAVLSGSAARQATPRS 236
Query: 341 DNNKNNNNSATNNNKRKR 358
K N +S N KR
Sbjct: 237 QATKRNGSSLLKKNSSKR 254
>gi|168062324|ref|XP_001783131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665381|gb|EDQ52068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 157/245 (64%), Gaps = 17/245 (6%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE---YK 161
+RQ +ILR I+ HKWAWPFM+PVDVKGLGL DYYEVI+KPMD TIK +M+AK+ Y+
Sbjct: 1 MRQVLSILRQISSHKWAWPFMKPVDVKGLGLHDYYEVIEKPMDLGTIKNKMDAKDASGYQ 60
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL-PKVTEEEKRREEEE 220
+V+E+ DVRLVF NAMKYN E SDV+VM+KTL KFEEKW L+ PK+ E
Sbjct: 61 HVQEVYQDVRLVFSNAMKYNPEGSDVYVMSKTLSEKFEEKWKTLVEPKLHE--------- 111
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKC-RKTSTEEKRKLGAAL 279
E + + H MA ++ L E+D L++L++ K R S EE+R LG +L
Sbjct: 112 -EVDIFSGIVDHDLHFLMA--STFFLEELDKQLEDLKQQATPKLSRAMSVEERRHLGQSL 168
Query: 280 TRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNN 339
RL P++L ++I+AQ N F ++EVE+D+DAQ +TLWRL+ +V+ L G
Sbjct: 169 GRLPPDNLSHVIQIIAQKNPSFNMNSDEVEVDIDAQDPATLWRLQRYVQAVLSGSGGRQA 228
Query: 340 NDNNK 344
N+
Sbjct: 229 TPRNQ 233
>gi|302813758|ref|XP_002988564.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
gi|300143671|gb|EFJ10360.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
Length = 293
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 181/299 (60%), Gaps = 33/299 (11%)
Query: 39 KVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQ-EASRREKAA 97
KV+ +E +V++I L + + T+ D ++E+ V +I+KQ+ E +RRE
Sbjct: 4 KVEDMERQVSDI----LRMRRASLKDRPVGITVTDDDREKAVAAIKKQRALENARREALH 59
Query: 98 EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA 157
KR ++ +R F ILR +TQHKWAWPFMQPVDV+GL L DYY+VI +PMDF TI+++MEA
Sbjct: 60 MKRAQDHLRIFSNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEA 119
Query: 158 KE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-LQLLPKVTEEE 213
K+ Y++V+EI DVRLVF NAM YN+ +DV+VMAKTL KFEEK+ L PK+ EE
Sbjct: 120 KDGSGYRSVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEER 179
Query: 214 KRR----------EEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVH-LDELREML-- 260
K R EA++ L + + + +EL E+ + + R+ML
Sbjct: 180 KLRLIGWLTRSAKRYTSCEARVPSHLERSQLN-----NLEDELEEIKISATSKYRQMLDG 234
Query: 261 ------VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMD 313
++ CR S EEKR+LG +L RL P L + ++I+A++N F A EVE+D+D
Sbjct: 235 FSSYSYLRVCRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVAEVEVDID 293
>gi|168003377|ref|XP_001754389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694491|gb|EDQ80839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 148/284 (52%), Gaps = 20/284 (7%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K+G KG+ +D R+Q+ EA+R KRM E+++Q T+LR +
Sbjct: 218 AKAKRGVGEKGTLDGRDP---------RRQKVEAAR-----GKRMGEMLKQCMTLLRKLM 263
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
HK W F +PVD + LGL DY+ +I KPMD TIKK++ K+Y + E D+RL F N
Sbjct: 264 THKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHLKQYASPLEFGEDIRLTFSN 323
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN DV+VMA+ L FEE W + KV EE +R +EE D +++
Sbjct: 324 AMTYNPVGHDVYVMAELLKNMFEEWWKNMGRKVEEERRRCGKEEEMLANDEDSVEESGEV 383
Query: 237 KMA-RD----TSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKAL 291
+ RD T + + R V K R + EEKRKL L RL + L + +
Sbjct: 384 RRGERDVVSLTRGKASSRMGSQPKPRPEEVGK-RAMTFEEKRKLSVNLERLPGDKLERIV 442
Query: 292 EIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQG 335
+I+ + N +E+E+D+D+ TLW L FV + +KS+G
Sbjct: 443 QIIKKRNPDLGQNEDEIEVDIDSFDNDTLWELDRFVTNYMKSRG 486
>gi|115466274|ref|NP_001056736.1| Os06g0138000 [Oryza sativa Japonica Group]
gi|113594776|dbj|BAF18650.1| Os06g0138000, partial [Oryza sativa Japonica Group]
Length = 124
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 95/126 (75%), Gaps = 8/126 (6%)
Query: 246 LYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATA 305
L E++ L+ELR+M+VQKCRK +T EKRKLGA L LSPE+L KALE+VAQ N F+A
Sbjct: 1 LIEINKQLEELRQMVVQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKG 60
Query: 306 EEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIA 365
+E+ELDMDAQSE+TLWRLKFFV++AL+ Q N + ++ N KRKREIC+A+A
Sbjct: 61 DELELDMDAQSETTLWRLKFFVREALERQANVASGRTDE--------NAKRKREICNALA 112
Query: 366 KTAKKK 371
+TA K+
Sbjct: 113 RTASKR 118
>gi|302143389|emb|CBI21950.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 133/280 (47%), Gaps = 37/280 (13%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
M + + G +L + +HK W F PVDVKGLGL DY+ +I PMD T+K ++ Y
Sbjct: 283 MNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWY 342
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL--------LPKVTEE 212
K+ RE DVRL F NAM YN + DVHVMA+ L FE+KW + P +
Sbjct: 343 KSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEKLPAPPPMLPSH 402
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKC--RKTSTE 270
E RR + +E+ M A D M Y V L++ + R + E
Sbjct: 403 EMRRVLDRSES---MTYAVDPKIKPMN-------YTPLVRTPSLKKPKAKDPNKRDMTFE 452
Query: 271 EKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
EK+KL L L E L + I+ ++N+ +E+E+D+D+ TLW L +V +
Sbjct: 453 EKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELDRYVTNY 512
Query: 331 LKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKK 370
KS + NKRK E+ A A+ A+K
Sbjct: 513 KKS-----------------LSKNKRKAELAQARAEAARK 535
>gi|222617974|gb|EEE54106.1| hypothetical protein OsJ_00865 [Oryza sativa Japonica Group]
Length = 508
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 122/251 (48%), Gaps = 10/251 (3%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A K + + G +L + +HK +W F PVD LGL DY+ +I KPMD T+K ++
Sbjct: 134 ARRKLYAPVFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRL 193
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW---------LQLL 206
A YK+ RE DVRL F+NAM+YN + DVH MA+ LL FEEKW L
Sbjct: 194 AAGHYKSPREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEVAQLSPQ 253
Query: 207 PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRK 266
P R+ +E + ++ + HA T + L + + K R+
Sbjct: 254 PPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKPKAREPNK-RE 312
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ EK++L L L PE L ++I+ + N +E+E+D+D+ TLW L F
Sbjct: 313 MTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRF 372
Query: 327 VKDALKSQGNN 337
V + KS N
Sbjct: 373 VTNYKKSISKN 383
>gi|168024468|ref|XP_001764758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684052|gb|EDQ70457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
R + + + E A KR+ ++++Q T+LR + HK W F +PVD + LGL DY+ +I
Sbjct: 57 RGKGKPLQKVEAARGKRVADMLKQCTTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIK 116
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
KPMD TIKK++ K Y + E D+RL F NAM YN DV+VMA+ L + FEE W
Sbjct: 117 KPMDLGTIKKKLHGKGYPSPVEFAEDIRLTFANAMTYNPVGHDVYVMAELLKSIFEEWWK 176
Query: 204 QLLPKVTEEEKRR---------EEEEAEAQLDMQLAQ-DAAHAKMARDTSNELYEVDVHL 253
+ K+ EE++R +E+ E +++ + D + + +S +
Sbjct: 177 NMSRKMEEEKRRAEKEEEMLLNDEDSVEETGEVRRGERDLSSLTRGKTSSRMASQPKPRP 236
Query: 254 DELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMD 313
DE+ + R + EEKRKL L RL + L + ++I+ + N +E+E+D+D
Sbjct: 237 DEVGK------RAMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNPDLGQNEDEIEVDID 290
Query: 314 AQSESTLWRLKFFVKDALKSQG 335
+ TLW L FV + +KS+G
Sbjct: 291 SFDNDTLWELDRFVTNYMKSRG 312
>gi|218187737|gb|EEC70164.1| hypothetical protein OsI_00884 [Oryza sativa Indica Group]
Length = 512
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ + G +L + +HK +W F PVD LGL DY+ +I KPMD T+K ++ A YK+
Sbjct: 92 VFKSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSP 151
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW---------LQLLPKVTEEEK 214
RE DVRL F+NAM+YN + DVH MA+ LL FEEKW L P
Sbjct: 152 REFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEVAQLSPQPPTPSSAA 211
Query: 215 RREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRK 274
R+ +E + ++ + HA T + L + + K R+ + EK++
Sbjct: 212 PRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKPKAREPNK-REMTFWEKQR 270
Query: 275 LGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQ 334
L L L PE L ++I+ + N +E+E+D+D+ TLW L FV + KS
Sbjct: 271 LSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRFVTNYKKSI 330
Query: 335 GNN 337
N
Sbjct: 331 SKN 333
>gi|15221424|ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName: Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity to a Ring3 protein from Homo sapiens gi|133157
and contains a bromodomain PF|00439. EST gb|F14211 comes
from this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor group E4 [Arabidopsis thaliana]
Length = 766
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 116/253 (45%), Gaps = 35/253 (13%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ + +L + +HK W F PVDVKGLGL DYY +I+ PMD TIK + YK+
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
RE DVRL F NAM YN E DVH+MA TLL FEE+W V E + RE
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERW-----AVIEADYNREMRFVTG 535
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL----------------------REMLV 261
+M L +++ V +D R +
Sbjct: 536 -YEMNLPTPTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPAL 594
Query: 262 QKC-------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDA 314
+K R + EEK+KL L L P+ L ++IV + NT + EE+E+D+D+
Sbjct: 595 KKPKANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDS 654
Query: 315 QSESTLWRLKFFV 327
TLW L FV
Sbjct: 655 VDPETLWELDRFV 667
>gi|357127683|ref|XP_003565508.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 494
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
+K S +A K + + G +L + +HK W F PVD LGL DY+ +I
Sbjct: 106 KKAPPNPSGSAEARRKLYAPVFKSCGLLLTRLMKHKHGWVFNVPVDASALGLHDYHTIIT 165
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW- 202
KPMD T+K ++ YK+ RE T+VRL F+NAMKYN + DV+ MA+ LL FEEKW
Sbjct: 166 KPMDLGTVKSRLAEGHYKSPREFATEVRLTFQNAMKYNPKGQDVYFMAEQLLNMFEEKWP 225
Query: 203 --------LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLD 254
L P ++ E + ++ + AHA T H
Sbjct: 226 DIEAEIAQLSPQPPTPSSAAPKKPREIDNGRVLERSDSTAHAAGLEATPKP------HPG 279
Query: 255 ELREMLVQKC-------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEE 307
R +++K R+ + EK+KL L L PE L ++I+ + N+ +E
Sbjct: 280 TGRPPVLKKPKAREPNKREMTFWEKQKLSNDLQDLPPEKLDNVVQIIKKRNSSLNQHDDE 339
Query: 308 VELDMDAQSESTLWRLKFFVKDALKSQGNN 337
+E+D+D+ TLW L FV + KS N
Sbjct: 340 IEVDIDSFDVETLWELDRFVTNYKKSMTKN 369
>gi|297843426|ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335436|gb|EFH65853.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 116/253 (45%), Gaps = 35/253 (13%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ + +L + +HK W F PVDVKGLGL DYY +I+ PMD TIK + YK+
Sbjct: 421 VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMKNLYKSP 480
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
RE DVRL F NAM YN E DVH+MA TLL FEE+W V E + RE
Sbjct: 481 REFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERW-----AVIEADYNREMRFVTG 535
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL----------------------REMLV 261
+M L +++ V +D R +
Sbjct: 536 -YEMNLPTHTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGSTPTSATPSGRTPAL 594
Query: 262 QKC-------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDA 314
+K R + EEK+KL L L P+ L ++IV + NT + EE+E+D+D+
Sbjct: 595 KKPKANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDS 654
Query: 315 QSESTLWRLKFFV 327
TLW L FV
Sbjct: 655 VDPETLWELDRFV 667
>gi|225446551|ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 654
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 135/297 (45%), Gaps = 50/297 (16%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
M + + G +L + +HK W F PVDVKGLGL DY+ +I PMD T+K ++ Y
Sbjct: 304 MNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWY 363
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
K+ RE DVRL F NAM YN + DVHVMA+ L FE+KW V E E RE
Sbjct: 364 KSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKW-----AVIEAEYSRELRL 418
Query: 221 AEAQLDMQLAQDAAH---AKMARDTSNEL-----------YEVDVHLDELREMLVQKC-- 264
+ +M L + A S+E+ Y VD + + + +
Sbjct: 419 G-YEYEMGLPTPTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPS 477
Query: 265 -----------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMD 313
R + EEK+KL L L E L + I+ ++N+ +E+E+D+D
Sbjct: 478 LKKPKAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDID 537
Query: 314 AQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKK 370
+ TLW L +V + KS + NKRK E+ A A+ A+K
Sbjct: 538 SVDAETLWELDRYVTNYKKS-----------------LSKNKRKAELAQARAEAARK 577
>gi|147820894|emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
Length = 660
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 50/301 (16%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
M + + G +L + +HK W F PVDVKGLGL DY+ +I PMD T+K ++ Y
Sbjct: 304 MNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWY 363
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
K+ RE DVRL F NAM YN + DVHVMA+ L FE+KW V E E RE
Sbjct: 364 KSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKW-----AVIEAEYSRELRL 418
Query: 221 AEAQLDMQLAQDAAH---AKMARDTSNEL-----------YEVDVHLDELREMLVQKC-- 264
+ +M L + A S+E+ Y VD + + + +
Sbjct: 419 G-YEYEMGLPTPTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPS 477
Query: 265 -----------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMD 313
R + EEK+KL L L E L + I+ ++N+ +E+E+D+D
Sbjct: 478 LKKPKAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDID 537
Query: 314 AQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQ 373
+ TLW L +V + KS + NKRK E+ A A+ A+K ++
Sbjct: 538 SVDAETLWELDRYVTNYKKS-----------------LSKNKRKAELAQARAEAARKIQE 580
Query: 374 K 374
+
Sbjct: 581 R 581
>gi|413947734|gb|AFW80383.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
gi|413947735|gb|AFW80384.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
Length = 490
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 10/247 (4%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A K + + +L+ + +HK +W F PVD LGL DY+ +I KPMD T+K ++
Sbjct: 121 ARRKLYAPVFKTCSALLQRLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKL 180
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---------L 206
A +Y++ RE DVRL F+NAM YN + DVH MA+ LL FEEKWL++
Sbjct: 181 AAGQYRSPREFAGDVRLTFRNAMTYNPKGQDVHFMAEQLLNMFEEKWLEIEAELAQLSPQ 240
Query: 207 PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRK 266
P R+ +E + ++ + HA + + + + + + + R
Sbjct: 241 PPTPSSAAPRKPKEIDNSRALERSDSTVHA-AGMEATPKTHNGRPPVSKKPKAREPNKRD 299
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ EK++L L L PE L ++I+ + N+ +E+E+D+D+ TLW L F
Sbjct: 300 MTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRF 359
Query: 327 VKDALKS 333
V + KS
Sbjct: 360 VTNYRKS 366
>gi|242055997|ref|XP_002457144.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
gi|241929119|gb|EES02264.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
Length = 482
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 20/256 (7%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A K + + +L+ + +HK +W F +PVD LGL DY+ +I KPMD T+K ++
Sbjct: 129 ARRKLYAPVFKTCSVLLQRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL 188
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW---------LQLL 206
A +YK+ RE DVRL F+NAM YN + DVH MA+ LL FEEKW L
Sbjct: 189 GAGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEVAQLSPQ 248
Query: 207 PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRK 266
P R+ +E + ++ + HA T H + K R+
Sbjct: 249 PPTPSSAAPRKPKEIDNSRVLERSDSTVHAAAMEATPK------THTGRPPVLKKPKARE 302
Query: 267 TSTE-----EKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLW 321
+ EK++L L L PE L ++I+ + N +E+E+D+D+ TLW
Sbjct: 303 PNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLW 362
Query: 322 RLKFFVKDALKSQGNN 337
L FV + KS N
Sbjct: 363 ELDRFVTNYRKSITKN 378
>gi|414875721|tpg|DAA52852.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 490
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 22/254 (8%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A K + + +L + +HK +W F +PVD LGL DY+ +I KPMD T+K ++
Sbjct: 119 ARRKLYAPVFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL 178
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-------LQLLPK 208
A +YK+ RE DVRL F+NAM YN + DVH MA+ LL FEEKW QL P+
Sbjct: 179 GAGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEIAQLSPQ 238
Query: 209 V----TEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKC 264
+ K+ + +E + ++ + HA T H + + K
Sbjct: 239 PPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPK------THTGRPQVLKKPKA 292
Query: 265 RKTSTE-----EKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSEST 319
R+ + EK++L L L PE L ++I+ + N +E+E+D+D+ T
Sbjct: 293 REPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVET 352
Query: 320 LWRLKFFVKDALKS 333
LW L FV + KS
Sbjct: 353 LWELDRFVTNYRKS 366
>gi|449444709|ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449516325|ref|XP_004165197.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 667
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 126/272 (46%), Gaps = 45/272 (16%)
Query: 103 ELIRQFGT----------ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
E+ FGT +L + +HK+ W F PVDV+GLGL DYY +I PMD T+K
Sbjct: 318 EIAHSFGTGSKFFKSCSSLLEKLIKHKYGWVFDAPVDVQGLGLHDYYTIIKHPMDLGTVK 377
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
++ YK+ +E DVRL F+NAM YN + DV+VMA LL+ FE++W+ + E
Sbjct: 378 SRLNKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVYVMADQLLSIFEDRWV-----IIEA 432
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMAR--------------DTSNELYEVDVHLDELRE 258
+ R E LD A ++ AR + + Y +D L
Sbjct: 433 DYNR---EMRFGLDYGAALSTPTSRKARLPPPPPLDMKRILERSESTTYRLDSKNRPLSA 489
Query: 259 MLVQKC-------------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATA 305
+ R + EEK+KL + L L E L L+I+ + N+
Sbjct: 490 TPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSSNLQNLPSEKLDAILQIIKKRNSNIFQDD 549
Query: 306 EEVELDMDAQSESTLWRLKFFVKDALKSQGNN 337
EE+E+D+D+ TLW L FV + KS N
Sbjct: 550 EEIEVDIDSVDAETLWELDRFVTNYKKSLSKN 581
>gi|225461616|ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 597
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 126/270 (46%), Gaps = 44/270 (16%)
Query: 98 EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA 157
+K + + + +L + +HK W F PVDVKGLGL DYY +I PMDF T+K ++
Sbjct: 249 DKYVAQAFKNCSNLLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRLSK 308
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
YK+ RE DVRL +NAM YN + DVH MA+ LL FEEKW +
Sbjct: 309 NWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAI------------ 356
Query: 218 EEEAEAQLDMQLAQDAA---------------HAKMAR--DTSNEL-YEVDVHLD----- 254
EA+ + DA H+ R D S + +D +L
Sbjct: 357 --EADLYWRFGMGHDAGTPTPTSRKAPYLHHHHSPEMRTVDRSGSMAMPIDSNLKPGNFA 414
Query: 255 ELREMLVQKC-------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEE 307
+R + +K R + EEK+KL + L L E L ++I+ + N+ +E
Sbjct: 415 HMRMPVPKKPKAKDPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNSAVSQQDDE 474
Query: 308 VELDMDAQSESTLWRLKFFVKDALKSQGNN 337
+E+D+D+ TLW L +V + KS N
Sbjct: 475 IEVDIDSVDAETLWELDRYVTNYKKSLSKN 504
>gi|302823131|ref|XP_002993220.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
gi|300138990|gb|EFJ05740.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
Length = 702
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 134/255 (52%), Gaps = 17/255 (6%)
Query: 92 RREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
R E A KRM ++++Q GT+L+ + HK AW F +PVD LGL DY++VI +PMD TI
Sbjct: 101 RVELARMKRMGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTI 160
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
KK++E Y+ E DV+L F NAM YN DV +MA L F+E+W + K+ E
Sbjct: 161 KKKLEGGHYRTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKLEE 220
Query: 212 EE-KRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL-------REMLVQK 263
E+ K R E+E A ++AQ + + ++ L ++ L L R
Sbjct: 221 EQTKCRVEDEVFA----EIAQGNPNPAL-QNLKQSLLSIEDQLSSLKKPAGAPRGSKKSG 275
Query: 264 CRKTSTEEKRKLGAALTRLSPEDLG-KALEIV---AQSNTGFQATAEEVELDMDAQSEST 319
R+ + EEK +LG L ++ ++ G KA EIV + N + + +E+D+D T
Sbjct: 276 KRQMTYEEKTELGKNLEKVLEQNPGDKADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDT 335
Query: 320 LWRLKFFVKDALKSQ 334
LW L V +K +
Sbjct: 336 LWELHKMVASCMKPK 350
>gi|302764766|ref|XP_002965804.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
gi|300166618|gb|EFJ33224.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
Length = 706
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 134/255 (52%), Gaps = 17/255 (6%)
Query: 92 RREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
R E A KRM ++++Q GT+L+ + HK AW F +PVD LGL DY++VI +PMD TI
Sbjct: 101 RVELARMKRMGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTI 160
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
KK++E Y+ E DV+L F NAM YN DV +MA L F+E+W + K+ E
Sbjct: 161 KKKLEGGHYRTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKLEE 220
Query: 212 EE-KRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL-------REMLVQK 263
E+ K R E+E A ++AQ + + ++ L ++ L L R
Sbjct: 221 EQTKCRVEDEVFA----EIAQGNPNPAL-QNLKQSLLSIEDQLSSLKKPAGAPRGSKKSG 275
Query: 264 CRKTSTEEKRKLGAALTRLSPEDLG-KALEIV---AQSNTGFQATAEEVELDMDAQSEST 319
R+ + EEK +LG L ++ ++ G KA EIV + N + + +E+D+D T
Sbjct: 276 KRQMTYEEKTELGKNLEKVLEQNPGDKADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDT 335
Query: 320 LWRLKFFVKDALKSQ 334
LW L V +K +
Sbjct: 336 LWELHKMVASCMKPK 350
>gi|449459556|ref|XP_004147512.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
gi|449511376|ref|XP_004163939.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
Length = 533
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 128/255 (50%), Gaps = 31/255 (12%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++ IL + +HK W F +PVDV G+GL DYY+++ +PMD ++K ++ Y++
Sbjct: 165 LLKACSQILTKLMKHKHGWIFNKPVDVVGMGLHDYYDIVKRPMDLGSVKVKLGKDAYESP 224
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR----REEE 219
+ +DVRL FKNAM YN + DVH MA+ LL +FEE + + + EE++R +EE
Sbjct: 225 YDFASDVRLTFKNAMTYNPKGHDVHAMAEQLLVRFEELFRPVAEALEEEDRRFCGYQEEL 284
Query: 220 EAEA-------------QLDMQLAQDAAHAKMARDTSN-ELYEVDVHL-DELREMLVQKC 264
A + + Q+ + K +SN + + V LR V+
Sbjct: 285 PASSWNHSEAERTVKKDNIQKQVVKKTEPMKAPSSSSNPPMMQSPVKTPSPLRAPPVKPL 344
Query: 265 ------------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDM 312
R+ + EEK KLG L L PE + + ++I+ + N + +E+ELD+
Sbjct: 345 KQPKPRAKDPNKREMTLEEKHKLGIGLQSLPPEKMEQVVQIIKKRNGHLKQDGDEIELDI 404
Query: 313 DAQSESTLWRLKFFV 327
+A TLW L V
Sbjct: 405 EAVDTETLWELDRLV 419
>gi|226495673|ref|NP_001142282.1| uncharacterized protein LOC100274451 [Zea mays]
gi|194707994|gb|ACF88081.1| unknown [Zea mays]
Length = 350
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 10/226 (4%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+HK +W F PVD LGL DY+ +I KPMD T+K ++ A +Y++ RE DVRL F+N
Sbjct: 2 KHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQYRSPREFAGDVRLTFRN 61
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQL---------LPKVTEEEKRREEEEAEAQLDM 227
AM YN + DVH MA+ LL FEEKWL++ P R+ +E + +
Sbjct: 62 AMTYNPKGQDVHFMAEQLLNMFEEKWLEIEAELAQLSPQPPTPSSAAPRKPKEIDNSRAL 121
Query: 228 QLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDL 287
+ + HA + + + + + + + R + EK++L L L PE L
Sbjct: 122 ERSDSTVHA-AGMEATPKTHNGRPPVSKKPKAREPNKRDMTFWEKQRLSNNLQDLPPEKL 180
Query: 288 GKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKS 333
++I+ + N+ +E+E+D+D+ TLW L FV + KS
Sbjct: 181 DNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFVTNYRKS 226
>gi|255568313|ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535590|gb|EEF37258.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 742
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 41/264 (15%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ + +L + +HK+ W F PVDVKGLGL DY+ +I PMD T+K ++ YK+
Sbjct: 399 IFKNCSALLEKLMKHKYGWVFKSPVDVKGLGLHDYFTIIKHPMDLGTVKTRLNKNWYKSP 458
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL-----------------L 206
E DVRL F NAM+YN + DVHVMA+ LL FE++W+ + +
Sbjct: 459 EEFAEDVRLTFHNAMRYNPKGQDVHVMAEILLKLFEDRWVVIKSEFDREMRFVVGCGIGI 518
Query: 207 PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKC-- 264
P T R+ LDM+ D R S +D + +
Sbjct: 519 PTPTS----RKAPLPPPPLDMRRILD-------RSDSMRYQPIDPRSKPISTTPSGRTPA 567
Query: 265 -----------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMD 313
R + +EK+KL L L E L ++I+ + N+ +E+E+D+D
Sbjct: 568 PKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLSQHDDEIEVDID 627
Query: 314 AQSESTLWRLKFFVKDALKSQGNN 337
+ TLW L FV + KS N
Sbjct: 628 SVDAETLWELDRFVTNYKKSLSKN 651
>gi|357141014|ref|XP_003572045.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 629
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 15/244 (6%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
+E+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TIK Q+
Sbjct: 275 SEQRLYSHAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKAQL 334
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV--TEEE 213
+Y+N +E DVRL F NAM YN + DVH MA+ LL FE +W ++ +V
Sbjct: 335 TRGQYRNPKEFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIQAEVEYLASC 394
Query: 214 KRREEEEAEAQLDMQLAQ--DAAHAKMARDT-SNELYEVDVHLDELREMLVQKC------ 264
++ +D++L + D+ MA D+ S L + +R ++K
Sbjct: 395 PPLPKKFPPPPIDLRLLERSDSLKHHMALDSKSRPLSHTPTY--SVRTPSLKKPKAKDLD 452
Query: 265 -RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRL 323
R + +EKRKL L L PE L ++I+ N + +E+E+++D+ TLW L
Sbjct: 453 KRDMTIDEKRKLSNNLQNLPPEKLDIVVQIIKNKNLSVRQHDDEIEVEIDSMDAETLWEL 512
Query: 324 KFFV 327
FV
Sbjct: 513 DRFV 516
>gi|302142921|emb|CBI20216.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 121/257 (47%), Gaps = 44/257 (17%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +HK W F PVDVKGLGL DYY +I PMDF T+K ++ YK+ RE DV
Sbjct: 132 LLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRLSKNWYKSPREFAEDV 191
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
RL +NAM YN + DVH MA+ LL FEEKW + EA+ +
Sbjct: 192 RLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAI--------------EADLYWRFGMG 237
Query: 231 QDAA---------------HAKMAR--DTSNEL-YEVDVHLD-----ELREMLVQKC--- 264
DA H+ R D S + +D +L +R + +K
Sbjct: 238 HDAGTPTPTSRKAPYLHHHHSPEMRTVDRSGSMAMPIDSNLKPGNFAHMRMPVPKKPKAK 297
Query: 265 ----RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTL 320
R + EEK+KL + L L E L ++I+ + N+ +E+E+D+D+ TL
Sbjct: 298 DPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNSAVSQQDDEIEVDIDSVDAETL 357
Query: 321 WRLKFFVKDALKSQGNN 337
W L +V + KS N
Sbjct: 358 WELDRYVTNYKKSLSKN 374
>gi|326496376|dbj|BAJ94650.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 662
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 10/241 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TIK Q+
Sbjct: 315 AEQRLYSHAFKKSSSLLCRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKGQL 374
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV--TEEE 213
Y++ +E DVRL F NAM YN + DVH MA+ LL FE +W ++ +V
Sbjct: 375 TRGHYRDPKEFANDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVDYLASC 434
Query: 214 KRREEEEAEAQLDMQLAQ--DAAHAKMARDTSNELY---EVDVHLDELREMLVQKC--RK 266
++ +D++L + D+ MA D+ + + V L++ + R
Sbjct: 435 PPLPKKFPPPPIDLRLLERSDSLKPHMALDSKSRPISHTPISVRTPSLKKPKAKDLDKRD 494
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ +EKRKL L L PE L ++I+ N + +E+E+++D+ TLW L F
Sbjct: 495 MTIDEKRKLSNNLQNLPPEKLDIVVQIIKNKNLSVRQHEDEIEVEIDSMDAETLWELDRF 554
Query: 327 V 327
V
Sbjct: 555 V 555
>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
Length = 844
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 121/233 (51%), Gaps = 24/233 (10%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
++Q +L+ + HK+ WPF QPVD L + DY++VI PMD TIK+Q+++ Y+
Sbjct: 141 LKQCQVLLKTLMTHKFGWPFNQPVDPIALNIPDYFDVIKHPMDLGTIKEQLDSGSYETEE 200
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
E DVRLVF N YN SD+ VMA TL + F EK+ L K+ EE R E E
Sbjct: 201 EFAEDVRLVFTNTFTYNQPGSDIVVMASTLSSLFNEKFEILKAKI-EERGRDAPEGVEET 259
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDEL---------REMLVQKCRKTSTEEKRKL 275
L K RD+ + V L+ + R + R + EEK+KL
Sbjct: 260 L-----------KELRDS---MSSVQRELERIKKTPNGRAGRAGAAEDQRPMTFEEKKKL 305
Query: 276 GAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVK 328
A+ L ++LG ++I+ + ++ EE+E+D+DA + +TL L+ +V+
Sbjct: 306 SHAINNLPSDNLGMVVKIIHERMPQLTSSGEEIEIDIDALNPATLRHLERYVR 358
>gi|414875719|tpg|DAA52850.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
gi|414875720|tpg|DAA52851.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 948
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 125/258 (48%), Gaps = 22/258 (8%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A K + + +L + +HK +W F +PVD LGL DY+ +I KPMD T+K ++
Sbjct: 119 ARRKLYAPVFKTCAALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL 178
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-------LQLLPK 208
A +YK+ RE DVRL F+NAM YN + DVH MA+ LL FEEKW QL P+
Sbjct: 179 GAGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEIEAEIAQLSPQ 238
Query: 209 V----TEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKC 264
+ K+ + +E + ++ + HA T H + + K
Sbjct: 239 PPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPK------THTGRPQVLKKPKA 292
Query: 265 RKTSTE-----EKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSEST 319
R+ + EK++L L L PE L ++I+ + N +E+E+D+D+ T
Sbjct: 293 REPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVET 352
Query: 320 LWRLKFFVKDALKSQGNN 337
LW L FV + KS N
Sbjct: 353 LWELDRFVTNYRKSITKN 370
>gi|218190413|gb|EEC72840.1| hypothetical protein OsI_06575 [Oryza sativa Indica Group]
Length = 420
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 119/242 (49%), Gaps = 11/242 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TIK ++
Sbjct: 71 AEQRLYSHAFKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRL 130
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV--TEEE 213
+Y+N RE DVRL F NAM YN + DVH MA+ LL FE +W ++ +V
Sbjct: 131 THGQYRNPREFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEVQWPEIEAEVQYLASC 190
Query: 214 KRREEEEAEAQLDMQLA--QDAAHAKMARDT-SNELYEVDVHLDELREM-----LVQKCR 265
+ +D++ D+ MA D+ S L + M R
Sbjct: 191 PPLPNKFPPPPIDVRFLDRSDSVKHHMALDSKSRPLSHTPTYSARTPSMKKPKAKDPDKR 250
Query: 266 KTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKF 325
+ +EKRKL L L PE L ++I+ N + +E+E+++D+ TLW L
Sbjct: 251 DMTIDEKRKLSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDR 310
Query: 326 FV 327
FV
Sbjct: 311 FV 312
>gi|326489531|dbj|BAK01746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 131/272 (48%), Gaps = 18/272 (6%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
+K S +A K + R +L + +HK W F PVD LGL DY+ +I
Sbjct: 106 KKAPPNPSGSAEARRKLYAPVFRSCAVVLARLMKHKHGWVFNVPVDASALGLHDYHTIIT 165
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW- 202
KPMD T+K ++ A YK+ RE T+VRL F+NAM+YN + DV+ MA+ LL FEEKW
Sbjct: 166 KPMDLGTVKSRLAAGHYKSPREFATEVRLTFQNAMRYNPKGQDVYFMAEQLLNMFEEKWP 225
Query: 203 ------LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDV----H 252
QL P+ +++ + + + + D A A D++ ++
Sbjct: 226 EIEAEIAQLSPQPPTPSSAPPKKQKQREREREREMDNARALERSDSTAHAAALEAPPKPQ 285
Query: 253 LDELREMLVQKC-------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATA 305
R +++K R+ + EK++L L L E L ++I+ + N+
Sbjct: 286 AGTARPPVLKKPKARDPNKREMTFWEKQRLSNDLQDLPAEKLDNVVQIIKKRNSSLNQHD 345
Query: 306 EEVELDMDAQSESTLWRLKFFVKDALKSQGNN 337
+E+E+D+D+ TLW L FV + KS N
Sbjct: 346 DEIEVDIDSFDVETLWELDRFVTNYKKSITKN 377
>gi|384247311|gb|EIE20798.1| hypothetical protein COCSUDRAFT_43706 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 87 QQEASRREKAAEK-RMEEL---------IRQFGTILRNITQHKWAWPFMQPVDVKGLGLD 136
QQE + A++ RM +L +Q ++L++I HKWAWPF PVD+
Sbjct: 62 QQEPPKEPTPADRERMAQLQKLRLADIVSKQCMSVLKSILAHKWAWPFADPVDLARYA-- 119
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DY V+ PMD +K+++E +Y E D RLVF NA YN +DV+VMA TLLA
Sbjct: 120 DYLNVVKSPMDLKWVKRKVEGGQYATPAEFAADFRLVFANAHTYNPPGTDVYVMASTLLA 179
Query: 197 KFEEKWLQ-LLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDE 255
+FE+KW ++PK+ E E +EA + + ++A+A+ E + H +
Sbjct: 180 RFEDKWNSVVVPKLIEAEVASRSDEAAVRERL---SESANARAGEALRGEAARLKGHFET 236
Query: 256 L-------REMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIV-AQSNTGFQATAEE 307
L + + C+ S KR+L + RLS E +A+ I+ A+ EE
Sbjct: 237 LEARIAESKSLAAAACQPMSISAKRQLLEQMARLSGEQYEQAIAIILARYPGAANNVGEE 296
Query: 308 VELDMDAQSESTLWRLKFFVKDAL 331
+ LD+ TL +L+ F L
Sbjct: 297 LNLDLSVADALTLRQLQHFCHVCL 320
>gi|224116690|ref|XP_002317367.1| global transcription factor group [Populus trichocarpa]
gi|222860432|gb|EEE97979.1| global transcription factor group [Populus trichocarpa]
Length = 347
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 39/272 (14%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L+++ G +L + +H++ W F PVDVK L L DY+++I PMD T+K ++ YK+
Sbjct: 76 LVKECGELLGKLMKHQYGWVFNVPVDVKMLKLHDYFKIIKHPMDLGTVKSRLSKNWYKSP 135
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+E DVRL F NAMKYN++ DVH MA TLL FEE W K +R E +A
Sbjct: 136 KEFAEDVRLTFNNAMKYNEKGQDVHTMADTLLKIFEENWANF--KAETNFDKRGEMGYDA 193
Query: 224 QLDMQLAQDAA--HAKM----------------------------ARDTSNELYEVDVH- 252
L ++ A+ HA D+ EL ++
Sbjct: 194 SLQTPASKRASGPHASSPACGSASACAPSPAPFQQTMPLETRTLGGTDSLTELGHPNMKA 253
Query: 253 LDELREMLVQKCR------KTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAE 306
D+ R + +K + K + EEK+KL +L L E L ++I+ + N G +
Sbjct: 254 ADQGRASVSKKPKKDTDKSKMTYEEKQKLSISLQSLPSEKLESVVQIIRKRNPGLFQQED 313
Query: 307 EVELDMDAQSESTLWRLKFFVKDALKSQGNNN 338
E+E+D+D+ TLW L V + KS N+
Sbjct: 314 EIEVDIDSFDNETLWELHSNVTNYRKSISKND 345
>gi|125581496|gb|EAZ22427.1| hypothetical protein OsJ_06088 [Oryza sativa Japonica Group]
Length = 656
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 11/242 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TIK ++
Sbjct: 307 AEQRLYSHAFKKSMSLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRL 366
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV--TEEE 213
+Y+N RE DVRL F NAM YN + DVH MA+ LL FE +W ++ +V
Sbjct: 367 THGQYRNPREFADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASC 426
Query: 214 KRREEEEAEAQLDMQLA--QDAAHAKMARDT-SNELYEVDVHLDELREM-----LVQKCR 265
+ +D++ D+ M D+ S L + M R
Sbjct: 427 PPLPNKFPPPPIDVRFLDRSDSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKR 486
Query: 266 KTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKF 325
+ +EKRKL L L PE L ++I+ N + +E+E+++D+ TLW L
Sbjct: 487 DMTIDEKRKLSNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDR 546
Query: 326 FV 327
FV
Sbjct: 547 FV 548
>gi|297598920|ref|NP_001046443.2| Os02g0250300 [Oryza sativa Japonica Group]
gi|255670765|dbj|BAF08357.2| Os02g0250300 [Oryza sativa Japonica Group]
Length = 600
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 10/228 (4%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++L + +HK+ W F +PVD LGL DY+ +I PMD TIK ++ +Y+N RE D
Sbjct: 321 SLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADD 380
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV--TEEEKRREEEEAEAQLDM 227
VRL F NAM YN + DVH MA+ LL FE +W ++ +V + +D+
Sbjct: 381 VRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPPPPIDV 440
Query: 228 QLA--QDAAHAKMARDT-SNELYEVDVHLDELREM-----LVQKCRKTSTEEKRKLGAAL 279
+ D+ M D+ S L + M R + +EKRKL L
Sbjct: 441 RFLDRSDSVKHHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNNL 500
Query: 280 TRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
L PE L ++I+ N + +E+E+++D+ TLW L FV
Sbjct: 501 QNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFV 548
>gi|356549487|ref|XP_003543125.1| PREDICTED: uncharacterized protein LOC100802622 [Glycine max]
Length = 531
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 159/371 (42%), Gaps = 58/371 (15%)
Query: 25 EVESFTLRVDDIFQKVDKLEERVNEIE---QFYLNASKKQGSNSKGSSTLKDKEKERHVP 81
E+ F R+ +++ KL ++ E LN K+ S K S +R +P
Sbjct: 81 ELNDFKNRLVSELEQIQKLRNQIGSSEFQPGQSLNGHPKKPSGKKISGN------KRPLP 134
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
S +++ K + + L++ +L+ + +HK W F PVDV GL L DY ++
Sbjct: 135 S------NSAKDLKRSHSEVGNLMKCCSQVLQKLIKHKHGWVFKAPVDVVGLKLHDYCDI 188
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I +PMD T+K + Y + +DVRL F NA+ YN + DV+ MA+ LLA+FEE
Sbjct: 189 IKQPMDLGTVKSNLSKNVYATPADFASDVRLTFNNALAYNPKGHDVYTMAEQLLARFEEL 248
Query: 202 WLQLLPKVTEE--EKRREEEEAEAQ-----------------LDMQLAQDAAHAKMARDT 242
+ + K R EEE +A +L ++ A +
Sbjct: 249 YRPVHEKFEGSIVHDRESEEELQASSWSQVEPERVKKKENPIPPAKLHKEPPPQHPASSS 308
Query: 243 SNELYEVDVHL-DELREMLVQKC------------RKTSTEEKRKLGAALTRLSPEDLGK 289
+ L + V +R V+ R S EEK KLG L L PE + +
Sbjct: 309 NPPLVQSPVRTPSPMRAPPVKPLKQPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQ 368
Query: 290 ALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV-----------KDALKSQGNNN 338
++I+ + N + +E+ELD++A TLW L V + AL +NN
Sbjct: 369 VVQIIRRRNGHLKQDGDEIELDIEAVDTETLWELDRLVTNYKKMVSKIKRQALMGNIDNN 428
Query: 339 NNDNNKNNNNS 349
NND N N
Sbjct: 429 NNDVQSNKGNG 439
>gi|296088086|emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 48/334 (14%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
R ++ R K + L++ G L + +HK +W F PVDV G+GL DY+++I
Sbjct: 162 RPPPFDSGRGPKRSAAENASLMKLCGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIK 221
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
+PMD T+K ++ Y + + DVRL F NA+ YN + DVHVMA+ LLA+FE+ +
Sbjct: 222 RPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFK 281
Query: 204 QLLPKVTEEEKRREEEEAEAQLD---------------------------MQLAQDAAHA 236
+ K+ EE++R +E +L MQ+ A +
Sbjct: 282 PVYNKL-EEDERDQERIIVGELQGSSWNHIPTPERLKKPSPKPVAKKPERMQVPIPATGS 340
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKC--------------RKTSTEEKRKLGAALTRL 282
+ + ++ + + R+ S EEK KLG L L
Sbjct: 341 SNPPSVQSVPTPSPMRAPPVKPLATRPSSGKQPKPKAKDPNKREMSLEEKHKLGLGLQSL 400
Query: 283 SPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKD------ALKSQGN 336
E + + ++I+++ N +E+ELD++A TLW L V + +K Q
Sbjct: 401 PQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELDRLVTNWKKMVSKIKRQAL 460
Query: 337 NNNNDNNKNNNNSATNNNKRKREICDAIAKTAKK 370
NN+ N ++ N + + + A+AK KK
Sbjct: 461 MVNNNTAATEVNRSSMNERTEPSLAPAMAKKPKK 494
>gi|356542179|ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
Length = 901
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 121/254 (47%), Gaps = 25/254 (9%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
+L++ +L + +HK W F PVDV+GLGL DY+ +I PMD T+K ++ YK+
Sbjct: 561 KLLKSCSALLEKLMKHKHGWVFNAPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYKS 620
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK-------- 214
+E DVRL F NAM YN + DVH+MA+ LL FEE+W + E +
Sbjct: 621 PKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLNIFEERWAIIESNYYREIRYGLDYGAP 680
Query: 215 ----RREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKC------ 264
R+ +DM+ D + ++ + ++ R +K
Sbjct: 681 SPVSRKAPPFRPPPIDMRRILDRS------ESMTQPPKIMGITPSSRTPAPKKPKAKDPH 734
Query: 265 -RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRL 323
R + EEK+KL L L E L ++I+ + N+ +E+E+D+D+ TLW L
Sbjct: 735 KRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVDIDSVDTETLWEL 794
Query: 324 KFFVKDALKSQGNN 337
FV + KS N
Sbjct: 795 DRFVTNYKKSLSKN 808
>gi|413936534|gb|AFW71085.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 667
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TI+ ++
Sbjct: 317 AERRLYSHAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRL 376
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVT--EEE 213
+Y+N +E DVRL F NAM YN + DVH MA+ L FE +W ++ +V
Sbjct: 377 SRGQYRNPKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASC 436
Query: 214 KRREEEEAEAQLDMQLAQ--DAAHAKMARDTSNELYEVDVHLDELREMLVQKC-----RK 266
++ +D+ + D+ MA DT++ M + R
Sbjct: 437 PPLPKKFPPPPIDLHFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRD 496
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ +EKRKL L L PE L ++++ N +E+E+++D+ TLW L F
Sbjct: 497 MTIDEKRKLSENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRF 556
Query: 327 V 327
V
Sbjct: 557 V 557
>gi|242061170|ref|XP_002451874.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
gi|241931705|gb|EES04850.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
Length = 654
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 10/241 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TI+ ++
Sbjct: 352 AERRLYSHAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRL 411
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVT--EEE 213
+Y+N +E DVRL F NAM YN + DVH MA+ L FE +W ++ +V
Sbjct: 412 SHGQYRNPKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASC 471
Query: 214 KRREEEEAEAQLDMQLAQ--DAAHAKMARDTSNELYEVDVHLDELREMLVQKC-----RK 266
++ +D++ + D+ MA DT++ M + R
Sbjct: 472 PPLPKKFPPPPIDLRFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRD 531
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ +EKRKL L L PE L ++++ N +E+E+++D+ TLW L F
Sbjct: 532 MTIDEKRKLSENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRF 591
Query: 327 V 327
V
Sbjct: 592 V 592
>gi|413936535|gb|AFW71086.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 671
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 10/241 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TI+ ++
Sbjct: 317 AERRLYSHAFKKSSSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRL 376
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVT--EEE 213
+Y+N +E DVRL F NAM YN + DVH MA+ L FE +W ++ +V
Sbjct: 377 SRGQYRNPKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASC 436
Query: 214 KRREEEEAEAQLDMQLAQ--DAAHAKMARDTSNELYEVDVHLDELREMLVQKC-----RK 266
++ +D+ + D+ MA DT++ M + R
Sbjct: 437 PPLPKKFPPPPIDLHFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRD 496
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ +EKRKL L L PE L ++++ N +E+E+++D+ TLW L F
Sbjct: 497 MTIDEKRKLSENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRF 556
Query: 327 V 327
V
Sbjct: 557 V 557
>gi|224146489|ref|XP_002326024.1| global transcription factor group [Populus trichocarpa]
gi|222862899|gb|EEF00406.1| global transcription factor group [Populus trichocarpa]
Length = 393
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 120/257 (46%), Gaps = 33/257 (12%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
++ + +L + +HK W F PVDVKGLGL DY+ +I PMD T+K ++ YK+
Sbjct: 74 KIFKNCSALLDKLMKHKHGWVFNTPVDVKGLGLHDYFIIIKHPMDLGTVKSRLTKNWYKS 133
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL----------------- 205
E DVRL F NAMKYN + DVHVMA+ LL FE KW +
Sbjct: 134 PEEFAEDVRLTFHNAMKYNPKGQDVHVMAEQLLDIFETKWAVIKSDYDHEMRFSSSYEVG 193
Query: 206 LPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMAR--DTSNELYEVDVHLDELREMLVQK 263
+P T R+ LDM D + + DT + + L L+ K
Sbjct: 194 IPTPTS---RKAPPFVPPPLDMWRILDRSESMTYPIIDTPDP--------NPLPLHLLAK 242
Query: 264 ---CRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTL 320
R + +EK+KL L L E L ++I+ + ++ +E+E+D+D+ TL
Sbjct: 243 DPNKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRSSALSQHDDEIEVDIDSVDVETL 302
Query: 321 WRLKFFVKDALKSQGNN 337
W L FV + KS N
Sbjct: 303 WELDRFVTNYKKSLSKN 319
>gi|413925979|gb|AFW65911.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
gi|413925980|gb|AFW65912.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 665
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 10/243 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TI+ ++
Sbjct: 311 AERRLYSHAFKKSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRL 370
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVT--EEE 213
+Y+N +E DVRL F NAM YN + DVH MA+ LL FE +W ++ +V
Sbjct: 371 SRGQYRNPKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASC 430
Query: 214 KRREEEEAEAQLDMQLAQ--DAAHAKMARDTSNELYEVDVHLDELREMLVQKC-----RK 266
++ +D++ + D+ +A DT++ M + R
Sbjct: 431 PPLPKKFPPPPIDLRFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRD 490
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ +EKRKL L L P L ++++ N + +E+E+++D+ TLW L F
Sbjct: 491 MTIDEKRKLSENLQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRF 550
Query: 327 VKD 329
V +
Sbjct: 551 VSN 553
>gi|413925981|gb|AFW65913.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 670
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 10/243 (4%)
Query: 97 AEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AE+R+ ++ ++L + +HK+ W F +PVD LGL DY+ +I PMD TI+ ++
Sbjct: 311 AERRLYSHAFKKSSSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRL 370
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVT--EEE 213
+Y+N +E DVRL F NAM YN + DVH MA+ LL FE +W ++ +V
Sbjct: 371 SRGQYRNPKEFAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASC 430
Query: 214 KRREEEEAEAQLDMQLAQ--DAAHAKMARDTSNELYEVDVHLDELREMLVQKC-----RK 266
++ +D++ + D+ +A DT++ M + R
Sbjct: 431 PPLPKKFPPPPIDLRFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRD 490
Query: 267 TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
+ +EKRKL L L P L ++++ N + +E+E+++D+ TLW L F
Sbjct: 491 MTIDEKRKLSENLQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRF 550
Query: 327 VKD 329
V +
Sbjct: 551 VSN 553
>gi|356515098|ref|XP_003526238.1| PREDICTED: uncharacterized protein LOC100780669 [Glycine max]
Length = 971
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 116/254 (45%), Gaps = 23/254 (9%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ ++L + +HK W F PVDV+ LGL DY+ +I PMD T+K ++ YK+
Sbjct: 628 FFKSCSSLLEKLMRHKHGWVFNSPVDVETLGLHDYFTIITHPMDLGTVKTRLNKNWYKSP 687
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK----RREEE 219
+E DVRL F+NAM YN + DVH+MA+ L FE++W + E + R
Sbjct: 688 KEFAEDVRLTFRNAMTYNPQGQDVHIMAELLSKIFEDRWAIIESDYNREMRYGFDYRAAP 747
Query: 220 EAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTST---------- 269
A + L ++ +A D L D R M + +T
Sbjct: 748 PAPSPLSRRV---SAFTPPPLDMRRILDRSDSMTQTPRLMSITPSSRTPAPKKPKAKDPH 804
Query: 270 ------EEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRL 323
EEK+KL L L E L ++I+ + N+ +E+E+D+D+ TLW L
Sbjct: 805 KRDMTFEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWEL 864
Query: 324 KFFVKDALKSQGNN 337
FV + KS N
Sbjct: 865 DRFVTNYKKSLSKN 878
>gi|449438275|ref|XP_004136914.1| PREDICTED: uncharacterized protein LOC101209352 [Cucumis sativus]
gi|449521741|ref|XP_004167888.1| PREDICTED: uncharacterized protein LOC101228592 [Cucumis sativus]
Length = 539
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 171/379 (45%), Gaps = 57/379 (15%)
Query: 35 DIFQKVDKLEERVNEIEQFYLNASKKQGSN-SKGSSTLKDKEKERHV-------PSIRKQ 86
D+F+ +L + E+EQ S+ + N S G + LK K + + PS K
Sbjct: 101 DLFELRKRL---LGELEQVRRIKSRIESGNISSGPNYLKKSSKTKGLNKRPKVLPSFGKD 157
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPM 146
Q + E + L++ IL + + K+ F +PVDV GLGL DYY++I PM
Sbjct: 158 LQVPNSFE------VGNLMKTCAQILNKLMKQKYGLIFNKPVDVVGLGLHDYYDIIKHPM 211
Query: 147 DFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
D T+K + Y + + DVRL F NAM+YN + +VH++A+ L KFEE +L +
Sbjct: 212 DLGTVKSTLSKNLYDSPLDFAEDVRLTFNNAMRYNPKGHEVHILAEQWLVKFEEMFLPVS 271
Query: 207 --------PKVTEEEKRREE----EEAE-------AQLDMQLAQDAAHAKMARDTSNELY 247
P EEE + EE E +++ ++ K S
Sbjct: 272 RKLGALKQPDPYEEELQSSSWNHVEEVENVNFNSNGNKPVEVVVPSSLTKPPSVQSPVRT 331
Query: 248 EVDVHLDELREMLVQKC-------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTG 300
V +++ + K R S EEK +LG L L PE + + ++IV + +
Sbjct: 332 PSPVRAPQVKPVKQPKPKAKDPNKRDMSLEEKHRLGIGLQGLPPEKMDQVIQIVKKRSGH 391
Query: 301 FQATAEEVELDMDAQSESTLWRLKFFVKD------ALKSQG---NNNNNDNNKNNNNSAT 351
+ +E+ELD++A TLW L V + +K Q +N N D+NK NN ++
Sbjct: 392 LRQDGDEIELDIEAVDTETLWELDRLVTNWKKMMSKVKRQALINDNTNADSNKENNEISS 451
Query: 352 NNNKRKREICDAIAKTAKK 370
N E+ + + AKK
Sbjct: 452 VN-----EMMNEVKTEAKK 465
>gi|356546972|ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 640
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 29/255 (11%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++ ++L + +HK W F PVDV+GLGL DY+ +I PMD T+K ++ Y++
Sbjct: 301 LLKSCSSLLEKLMKHKHGWVFDTPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYRSP 360
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+E DVRL F NAM YN + DVH+MA+ L FEE+W + E RE
Sbjct: 361 KEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEERW-----AIIESNYNREMTYG-- 413
Query: 224 QLDMQLAQDAAH-AKMARDTSNELYEVDVHLDELRE----MLVQKCRKT----------- 267
LD + A R ++ + + + + M + +T
Sbjct: 414 -LDYGAPSPVSRKAPPFRPPPIDMRRILDRSESMTQPPKIMGITPSSRTPAPKKPKAKDP 472
Query: 268 -----STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWR 322
+ EEK+KL L L E L ++I+ + N+ +E+E+D+D+ TLW
Sbjct: 473 HKRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVDIDSVDTETLWE 532
Query: 323 LKFFVKDALKSQGNN 337
L FV + KS N
Sbjct: 533 LDRFVTNYKKSLSKN 547
>gi|356554838|ref|XP_003545749.1| PREDICTED: transcription factor GTE11-like [Glycine max]
Length = 536
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 136/316 (43%), Gaps = 42/316 (13%)
Query: 48 NEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQ 107
N IE L + + K S K +R +PS + S E + L++
Sbjct: 104 NRIESGDLQPGQSFNGHPKKPSNKKVSGNKRPLPSNSATDLKRSHSEVGS------LMKG 157
Query: 108 FGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREIC 167
+L+ + +HK W F PVDV GL L DYY+VI +PMD T+K + +Y +
Sbjct: 158 CSQVLQKLMKHKHGWIFNAPVDVVGLQLTDYYDVIKQPMDLGTVKSNLSMNKYTTPSDFA 217
Query: 168 TDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV---------TEEE----- 213
+DVRL F NA+ YN + DV+ +A+ LL +FEE + L K +EEE
Sbjct: 218 SDVRLTFNNALAYNPKGHDVYTVAELLLTRFEELYRPLHEKFEGSVGHDRESEEELQASS 277
Query: 214 ---------KRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHL-DELREMLVQK 263
K++E + Q A ++ L + V +R V+
Sbjct: 278 WSHVEPERVKKKENPTPPPPPPPEKLQQEPPQPPASSSNPPLLQSPVRTPSPMRAPPVKP 337
Query: 264 C------------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELD 311
R S EEK KLG L L PE + + ++I+ + N + +E+ELD
Sbjct: 338 LKQPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELD 397
Query: 312 MDAQSESTLWRLKFFV 327
++A TLW L V
Sbjct: 398 IEAVDTETLWELDRLV 413
>gi|449439059|ref|XP_004137305.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449483310|ref|XP_004156552.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 538
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 22/253 (8%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
++ +++ +L + +HK+ W F PVD K LGL DY+++I KPMD TIK ++
Sbjct: 227 KIGPVLKSCSNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRLNKNW 286
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW----------------- 202
YK+ RE DVRL F NA+ YN + DVH+MA+ L FEEKW
Sbjct: 287 YKSPREFAEDVRLTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQNVGKGFQVDD 346
Query: 203 LQLLPKVTEEEKRREEEEAEAQLDMQ-LAQDAAHAKMARDTSNELYEVDV-HLDELREML 260
+LP T R+ A ++ + ++ + K ++ + DV D+ +
Sbjct: 347 GSVLPTPTS---RKSPALATRPVESRTFSRSDSTTKHFLTSNPKQPPTDVAPPDKKPKAK 403
Query: 261 VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTL 320
+ R + EEK+KL L L + L ++I+ + N G +E+ELD+ + TL
Sbjct: 404 NHEIRDMTYEEKQKLSIDLQDLPSDKLNNVVKIIKKRNQGLFQNDDEIELDIGSVDSETL 463
Query: 321 WRLKFFVKDALKS 333
W L+ FV + KS
Sbjct: 464 WELERFVANYKKS 476
>gi|356545057|ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 115/251 (45%), Gaps = 17/251 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ ++L + +HK W F PVDV+ LGL DY+ +I PMD T+K ++ YK+
Sbjct: 531 FFKSCSSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKSRLNKNWYKSP 590
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+E DVRL F+NAM YN DVH+MA+ L FE++W + E + + A A
Sbjct: 591 KEFAEDVRLTFRNAMTYNPPGQDVHIMAEQLSKIFEDRWAIIESDYNREMRYGFDYGAVA 650
Query: 224 QLDMQLAQD-AAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTST------------- 269
L++ +A D L + R M + +T
Sbjct: 651 PALSPLSRRVSAFTPPPLDMRRILNRSESMTQTPRLMSITPSSRTPAPKKPKAKDPHKRD 710
Query: 270 ---EEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFF 326
EEK+KL L L E L ++I+ + N+ +E+E+D+D+ TLW L F
Sbjct: 711 MTFEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELDRF 770
Query: 327 VKDALKSQGNN 337
V + KS N
Sbjct: 771 VTNYKKSLSKN 781
>gi|145347731|ref|XP_001418315.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578544|gb|ABO96608.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 610
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 158/323 (48%), Gaps = 42/323 (13%)
Query: 26 VESFTLRVDDIFQKVDKLE-------ERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKER 78
V + R D+ ++ D+L VNEI+ A +K S S+G S ++ K
Sbjct: 209 VNNLGKRATDLVERRDELSLIAQTANASVNEID-----AKRKVSSVSRGVSAIRQKL--- 260
Query: 79 HVPSIRKQQQEA--SRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLD 136
+ + QQ + R + +E + +Q + +R + HKW +PF PVD LGL
Sbjct: 261 ---ACKPDQQHGFNTLRYRCL---LEIVHKQCLSAVRQLMAHKWGFPFSAPVDPDALGLP 314
Query: 137 DYYEVIDKPMDFSTIKKQME-AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
Y E+I +PMD TIKK +E +Y E+ DVRL F NAMK+N+E +DVH MA LL
Sbjct: 315 TYREIITEPMDLGTIKKLIENGGKYVMAEEVDADVRLTFANAMKFNNEGTDVHTMACGLL 374
Query: 196 AKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNE---------L 246
++E KW + ++ + E E DM +A++ A + A S E L
Sbjct: 375 DEWEPKWEAIKQRIADVEACVLVER-----DMAVAKNEAAQRRADVVSKEKECAKASEAL 429
Query: 247 YEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDL-GKALEIVAQSNTGFQATA 305
V + L E+ ++ R E++ L + L R PE L A +I+A + TG+ A A
Sbjct: 430 DLVSMQLREVETQVLALMRPLQREDRLDLASDL-RCLPESLRSGAKDIIAANTTGWSAQA 488
Query: 306 EEVELDMDAQSESTLWRLKFFVK 328
+E D+DA +E TL L + K
Sbjct: 489 -HLE-DIDAHNEITLHLLARYTK 509
>gi|47210026|emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 28/261 (10%)
Query: 97 AEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
KR E+L R ++R + K +AWPF +PVDV LGL DYY++I PMD STIKK
Sbjct: 738 PPKRQEQL-RFCARLVREMLSRKHASYAWPFYKPVDVTSLGLHDYYDIIKHPMDLSTIKK 796
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+M++++Y++ +E DVRL+F N KYN DV MA+ L FE ++ + +P EE
Sbjct: 797 KMDSRQYRDAQEFAADVRLMFSNCYKYNPPDHDVVSMARNLQDVFEMRFAK-MPDDPEEA 855
Query: 214 KRREEEEA---EAQLDMQLAQDAAHAKMARDTS-------------------NELYEVDV 251
+ A Q+ A + + E V
Sbjct: 856 VPVPTPSSALLPAPSTRQVPPPAVSDDSSSSSESECSSADSEKERQQRLAQLQEQTAVVS 915
Query: 252 HLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQAT-AEEVEL 310
D + ++CR S EEKR+L + +L + LG+ + I+ +++ +E+E+
Sbjct: 916 SPDAFGSVSTERCRPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKSSNPDEIEI 975
Query: 311 DMDAQSESTLWRLKFFVKDAL 331
D + STL L+ +V L
Sbjct: 976 DFETLKPSTLRELEKYVSSCL 996
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+++ +H +AWPF PVD L L DYY++I PMD TIK+++E Y N +E D
Sbjct: 467 VLKSLWKHHFAWPFQAPVDAVKLNLPDYYKIIKTPMDMGTIKRRLENNYYWNAQECIHDF 526
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ +LQ + ++ +EEK
Sbjct: 527 NTMFTNCYIYNKPGDDIVLMAEAL----EKVFLQKITEMPQEEK 566
>gi|255567054|ref|XP_002524509.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223536183|gb|EEF37836.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 553
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 42/294 (14%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRM-----EELIRQFGTILRNITQHKWAWPFMQPV 128
KEK +I+K+ + ++ +K E + E+ ++ +L + +H++ W F +PV
Sbjct: 177 KEKVLGSENIKKKLKTSNEPKKGGEGNIMGRCNREVFKKCEDLLEKLMKHQYGWVFNKPV 236
Query: 129 DVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVH 188
DVK L L DY+++I PMD T+K +++ YK+ +E DV+L F NAMKYND+ D H
Sbjct: 237 DVKKLKLHDYFKIIKHPMDLGTVKSRLKKNWYKSPKEFAEDVKLTFNNAMKYNDKGQDAH 296
Query: 189 VMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQL---------------------DM 227
+MA LL FEE W + P+ E R + +A L
Sbjct: 297 IMADVLLKLFEEHWAIIEPEFINNE--RVDMGYDAGLPRPAPNRASAPPAPAPSPVLASA 354
Query: 228 QLAQDAAHAK-------MARDTSNELYEVDVHLDELREMLVQKC-------RKTSTEEKR 273
L + + +K M + ++ + ++ E R + +K R+ + EEK+
Sbjct: 355 PLRKMPSESKILDRSESMTKPMNSSMKAANMATHEGRLPMSKKPKEIDPQRREMTFEEKQ 414
Query: 274 KLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
+L A L + + L ++I+ + N G +E+E+D+D+ TLW L V
Sbjct: 415 RLSADLLDMPSDKLDSVVQIIRKRNPGLCQQDDEIEVDIDSFDSETLWELDRLV 468
>gi|112292667|gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 128/300 (42%), Gaps = 45/300 (15%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
K + +++Q G IL + +HK W F PVDV G+GL DY ++I PMD T+K +
Sbjct: 31 KMLSSMMKQCGQILTKLMRHKHGWIFNVPVDVVGMGLHDYNQIIKHPMDLGTVKLNIGKN 90
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE------------------ 200
Y + + +DVRL F NA+ YN + DV+ MA+ LL +FEE
Sbjct: 91 LYSSPLDFASDVRLTFNNALSYNPKGHDVYAMAEQLLVRFEEMFEPAYKKFEDAQQRKIS 150
Query: 201 -------KWLQLLPKVTEEEKRREEEEAEA---------QLDMQLAQDAAHAKMARDTSN 244
W +P + E R+ + A + + Q A + TS
Sbjct: 151 AGEIRRSSWSHQIP-MPESIPNRDPLSSSAATRPGGFAHPMPLSTPQPQAFPQALASTSA 209
Query: 245 ELYEVDVHLDELREMLVQKC---------RKTSTEEKRKLGAALTRLSPEDLGKALEIVA 295
+ +R V++ R+ S EEK KLG +L L E + + ++I+
Sbjct: 210 PAPAPKPFM-AMRSATVKQPKPKAKDPNKREMSFEEKHKLGLSLQSLPQEKMEQVVQIIR 268
Query: 296 QSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNK 355
+ N +E+ELD++ TLW L FV + K NN N+A NK
Sbjct: 269 KRNGHLAQDGDEIELDIEVVDTETLWELDRFVYNCKKLMSKIKRQALVSNNQNTAEEGNK 328
>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
Length = 605
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYY 139
VPSI Q ++S + KAA + +IR G I+R + HK W F +PVD G+ DY+
Sbjct: 38 VPSISTCQHQSSYKVKAASMKSSRMIRLCGNIVRKLIDHKGGWLFKEPVDPVLYGIPDYF 97
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+VI PMD T+K ++ K+Y ++ E DVRL F NAMKYN +DVH +AK L F+
Sbjct: 98 DVIHNPMDLGTVKNKLTKKQYVSIEEFAADVRLTFSNAMKYNPPENDVHKVAKELNGIFD 157
Query: 200 EKW 202
+W
Sbjct: 158 SEW 160
>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
Length = 781
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 30/274 (10%)
Query: 77 ERHVPSIRKQQQEASRREKAAEK----RMEE------------LIRQFGTILRNITQHKW 120
E VP +KQ + R +A++ R E ++Q +L+ + H +
Sbjct: 162 EASVPPAKKQLVPSGRNGPSAKRSSSGRFESAKPAAVSASSTASLKQCEQLLQRLMSHTF 221
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
W F PVDV L + DY+ VI PMD T+K ++ A EY + + DVRL F NAM Y
Sbjct: 222 GWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKSKLTAGEYTHPLDFAADVRLTFSNAMTY 281
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQL---LPKVTEEEKRREEEEAEAQLDMQLAQDAAHAK 237
N +DVH MAKTL FE +W + P TEE++ + A + A+ A
Sbjct: 282 NPPANDVHTMAKTLSKFFEVRWKTIEKKFPTTTEEQR----QVPSATTVPKEAESALPVP 337
Query: 238 MARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQS 297
+ T + DV + +++ + +EK KL L L E + + +
Sbjct: 338 PPKKTKFPTNDPDVQPTSVVKVM-------TDQEKHKLSVELEALLGELPESIINFLKEH 390
Query: 298 NTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
++ QA +E+E+D+DA S+ TL+ L+ + D +
Sbjct: 391 SSNSQAGEDEIEIDIDALSDDTLFALRKLLDDYM 424
>gi|449465695|ref|XP_004150563.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 629
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++L + +HK W F PVDV+GL L DY+ +I PMD T+K ++ YK+ +E D
Sbjct: 307 SLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNKNWYKSPKEFAED 366
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEA-------- 221
VRL F+NAM YN + DVH+MA+ LL FE++W+ + +E + E A
Sbjct: 367 VRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEMRLGMEYGAPLPSSNSV 426
Query: 222 -----EAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL------REMLVQKC------ 264
LDM+ K+ R + + + D + R ++K
Sbjct: 427 RGHPRPVPLDMR--------KILRRSDSLINPADSRTQPMSVTPSARTPSLKKPKAKDVF 478
Query: 265 -RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRL 323
R + EK+KL L L E L L+I+ + N +E+E+D+D+ TLW L
Sbjct: 479 KRDMTYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEIEVDIDSVDTETLWEL 538
Query: 324 KFFVKDALKSQGNN 337
V + KS N
Sbjct: 539 DRLVMNYRKSLSKN 552
>gi|449526541|ref|XP_004170272.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE4-like
[Cucumis sativus]
Length = 629
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 114/252 (45%), Gaps = 30/252 (11%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++L + +HK W F PVDV+GL L DY+ +I PMD T+K ++ YK+ +E D
Sbjct: 307 SLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNKNWYKSPKEFAED 366
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQL 229
VRL F+NAM YN + DVH+MA+ LL FE++W V E +E + L
Sbjct: 367 VRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRW------VVIESNYYQEMRLGMEYGGPL 420
Query: 230 AQDAAHAKMARDTSNELYEVDVHLDEL--------REMLVQKCRKTST------------ 269
+ R ++ ++ D L + M V +T +
Sbjct: 421 PSSNSVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSARTPSLKKPKAKDVFKR 480
Query: 270 ----EEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKF 325
EK+KL L L E L L+I+ + N +E+E+D+D+ TLW L
Sbjct: 481 DMTYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEIEVDIDSVDTETLWELDR 540
Query: 326 FVKDALKSQGNN 337
V + KS N
Sbjct: 541 LVMNYRKSLSKN 552
>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
Length = 1321
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 14/253 (5%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
R Q+ RR + + + ++ +L + +H A PF+ PVD LG+ DY+ I
Sbjct: 627 RAQRSSKGRRRILMDVVLSPVFKRCSDLLDELMEHPQAGPFLVPVDPYALGILDYFNFIK 686
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
+PMDF TIK + Y + E DVRLVF NA YN + VH+MAKTL FEEK+
Sbjct: 687 RPMDFGTIKNSIVGGVYHTIDEFAEDVRLVFSNAKAYNPPANLVHIMAKTLEDLFEEKF- 745
Query: 204 QLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLV-- 261
P+V EE +E + + + + +D+ + S+
Sbjct: 746 ---PQVIEEPDESDETQDKVNVS-NVNKDSRRKPSSSSPSSSHSSSKRRSSTSSSRSSSS 801
Query: 262 ------QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNT-GFQATAEEVELDMDA 314
+K + + EEK KLG+ +T+L E L K L+I+ +N+ EEVE+D++
Sbjct: 802 RSSSNRKKLPEITMEEKTKLGSEITQLPVEYLPKILQIIHNTNSLPDHDPNEEVEIDLNN 861
Query: 315 QSESTLWRLKFFV 327
+ TL RL FV
Sbjct: 862 FDDDTLRRLNRFV 874
>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
Length = 577
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 63 SNSKGSSTLKDKEKERH-----VPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S S S T D E +H V SI + ++S KAA + +IR G I+R +
Sbjct: 15 SESGDSDTDSDVEGSKHSQKSGVTSISTCEHQSSYNLKAASMKSSRMIRLCGNIVRKLID 74
Query: 118 HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNA 177
HK W F +PVD G+ DY++VI PMD TIK ++ K+Y ++ E DVRL F NA
Sbjct: 75 HKCGWLFKEPVDPDLYGIPDYFDVIRSPMDLGTIKNKLTKKKYVSIEEFAADVRLTFSNA 134
Query: 178 MKYNDERSDVHVMAKTLLAKFEEKW 202
MKYN +DVH+ AK L F+ +W
Sbjct: 135 MKYNPPGNDVHIFAKELNEMFDSEW 159
>gi|413941779|gb|AFW74428.1| hypothetical protein ZEAMMB73_413666 [Zea mays]
Length = 757
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 45/263 (17%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
+Q +L++I H WA PF+ PVD+ L + DY++++ +PMD TI+K+++A Y R
Sbjct: 170 FKQCANLLKSIMSHVWAGPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKKLKAGMYSTPR 229
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL----------PKVTEEEK 214
E DVRL F NAM YN +DVH+MAKTL FE +W +L+ P+ E+
Sbjct: 230 EFAADVRLTFSNAMNYNPVNNDVHLMAKTLSKNFETRW-KLIEKKLPKPDDKPQPVEKPP 288
Query: 215 RREEEE-------AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKT 267
RE E A + D+ + + + +D E Y D +L K RKT
Sbjct: 289 VREPTEKNSTKGVAVEKEDITKKKPSKKSVPKQDIFQEGYSAD------NPVLQPKKRKT 342
Query: 268 S---------------------TEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAE 306
S +E+K + A L +E + A E
Sbjct: 343 SPLIQDASLVEDVVPTGKRMMTSEQKYDISARLQSFGAFIPDHVVEFIRSRVDDCDADEE 402
Query: 307 EVELDMDAQSESTLWRLKFFVKD 329
E+ELD+D + TL+ L+ + D
Sbjct: 403 EMELDIDVLGDDTLFELQQLLDD 425
>gi|356554832|ref|XP_003545746.1| PREDICTED: uncharacterized protein LOC100819363 [Glycine max]
Length = 529
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 140/325 (43%), Gaps = 39/325 (12%)
Query: 36 IFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREK 95
+ +++++ + N+IE + + K S+ K +R PS + + S E
Sbjct: 86 LVSELEQIRKLRNQIESSEFQPGQSLNGHPKKPSSKKVSGNKRPWPSNSAKDLKRSHSEA 145
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
L++ +L+ + +HK W F PVD+ GL L DY ++I +PMD T+K +
Sbjct: 146 G------NLMKCCSQVLQKLMKHKHGWVFNAPVDIVGLKLHDYCDIIKQPMDLGTVKSNL 199
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV--TEEE 213
Y + +DVRL F NA+ YN + DV+ MA+ LLA+FEE + + K +
Sbjct: 200 SKNVYATPADFASDVRLTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSISH 259
Query: 214 KRREEEEAEAQ------------------LDMQLAQDAAHAKMARDTSNELYEVDVHL-D 254
R EEE +A Q A ++ L + V
Sbjct: 260 DRESEEELQASSWSHVEPERVKKKEKPPPPPPAKLQQEPPLPPASSSNPPLLQSPVRTPS 319
Query: 255 ELREMLVQKC------------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ 302
+R V+ R S EEK KLG L L PE + + ++I+ + N +
Sbjct: 320 PMRVPPVKPLKQPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLK 379
Query: 303 ATAEEVELDMDAQSESTLWRLKFFV 327
+E+ELD++A TLW L V
Sbjct: 380 QDGDEIELDIEAVDTETLWELDRLV 404
>gi|224056335|ref|XP_002298808.1| global transcription factor group [Populus trichocarpa]
gi|222846066|gb|EEE83613.1| global transcription factor group [Populus trichocarpa]
Length = 474
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 40/265 (15%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
+L++ IL + +HK + F PVDV G+ L DY+++I PMD T+K ++ Y++
Sbjct: 172 QLMKNCSQILSKLMKHKLGYIFNSPVDVVGMQLHDYHDIIKSPMDLGTVKSKLTKNLYES 231
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE---------- 212
R+ DVRL F NAMKYN + +V+++A+ L +FE+ + + KV E+
Sbjct: 232 PRDFAADVRLTFNNAMKYNPKGHEVYMLAEQFLTRFEDFYRPIKEKVGEDFDEEENDQVQ 291
Query: 213 -------EKRREEEEAEAQLDMQLAQDAAHA-KMARDTSNELYEVDVHLDE--------- 255
+ R E E Q+D Q A + + + + L++
Sbjct: 292 EVQASSWDHIRREPERVNQIDDDFMQVTAKSDPIGHQMHQQPLQQPTGLNQNPNLVRTPS 351
Query: 256 -LREMLVQKC------------RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ 302
+R V+ R+ S EEK KLG L L E + + ++I+ + N +
Sbjct: 352 PMRMPQVKPVKQPKPKAKDPNKREMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRNGHLR 411
Query: 303 ATAEEVELDMDAQSESTLWRLKFFV 327
+E+ELD++A TLW L FV
Sbjct: 412 QEGDEIELDIEAVDTETLWELDRFV 436
>gi|356508786|ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 781
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 15/224 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + H++ W F PVDV L + DY+ VI PMD T+KK++ + EY N + DV
Sbjct: 214 VLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNPMDFAADV 273
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
RL F+NAM YN +DVH+MA+TL FE +W + K+ + E ++ +++
Sbjct: 274 RLTFENAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPAIDSVASEPSRPTHVETEIS 333
Query: 231 QDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDL 287
K + T N + +V + ++ ++ + EEK+KL L + P+ +
Sbjct: 334 DRVPPTKKKKITPN---DTNVKPEPVKRIM-------TVEEKQKLSLELETMIGELPDSI 383
Query: 288 GKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
L QS Q +E+E+D+DA S+ TL++L+ + D +
Sbjct: 384 SDFLR--EQSYNEGQINDDEIEIDIDALSDDTLFKLRKLLDDYM 425
>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1172
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 14/219 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ +PF+ PVD L + DY+ I PMDF TI+ + Y+ E D
Sbjct: 538 ILDFLMNHQMGYPFLVPVDPIALNILDYFTYIKHPMDFGTIRNSLLDGVYEAPDEFAADC 597
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
RLVF NA YN + VH+MAKTL FE+K+ + L + E + EE E +L M++
Sbjct: 598 RLVFSNARLYNPPANQVHIMAKTLEDLFEKKYAKALAEPPSPEIQPEESEKIKRLTMEMK 657
Query: 231 QDAAHA-KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGK 289
KM ++++ R + R + +EK LGAA+ L P +L K
Sbjct: 658 TMTKELEKMKKESTG----------GGRGRYREAARPMTLDEKTHLGAAINALHPSNLPK 707
Query: 290 ALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFV 327
++++ S+T Q TA EE+E+D++ TL RL+ FV
Sbjct: 708 LIQVI--SHTLDQNTAQEEIEIDLEKLDTGTLRRLEQFV 744
>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
Length = 491
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 36/248 (14%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L+ + H++AW F PVDV L L DY+ +I PMD T+K ++ + Y +
Sbjct: 136 LMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSGAYSSP 195
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LPK-----VTEEEKR 215
+ DVRL F NAM YN +DVHVMA L + F+ +W + LPK + + +
Sbjct: 196 LDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKKLPKTDGHSLPTKSRP 255
Query: 216 REEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKL 275
RE+ E + ++ + A+ + ++L D EEK L
Sbjct: 256 REDVETVKNVPLKKMKVASRPQEVTPIPSKLVMTD-------------------EEKLSL 296
Query: 276 GAALTRLSPEDLGK-ALEIV----AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
G L L LG+ L I+ QS+ G + +E E+D+D S+ TL++L+ + D
Sbjct: 297 GRELESL----LGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDTLFKLRKLLDDH 352
Query: 331 LKSQGNNN 338
+ + NN
Sbjct: 353 FQEKQKNN 360
>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
Length = 750
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 36/248 (14%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L+ + H++AW F PVDV L L DY+ +I PMD T+K ++ + Y +
Sbjct: 185 LMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSGAYSSP 244
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LPK-----VTEEEKR 215
+ DVRL F NAM YN +DVHVMA L + F+ +W + LPK + + +
Sbjct: 245 LDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKKLPKTDGHSLPTKSRP 304
Query: 216 REEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKL 275
RE+ E + ++ + A+ + ++L D EEK L
Sbjct: 305 REDVETVKNVPLKKMKVASRPQEVTPIPSKLVMTD-------------------EEKLSL 345
Query: 276 GAALTRLSPEDLGK-ALEIV----AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
G L L LG+ L I+ QS+ G + +E E+D+D S+ TL++L+ + D
Sbjct: 346 GRELESL----LGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDTLFKLRKLLDDH 401
Query: 331 LKSQGNNN 338
+ + NN
Sbjct: 402 FQEKQKNN 409
>gi|295828222|gb|ADG37780.1| AT1G06230-like protein [Neslia paniculata]
Length = 210
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +HK W F PVDVKGLGL DY+ +I+ PMD TIK + YK+ RE DV
Sbjct: 109 LLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDV 168
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
RL F NAM YN DVHVMA+TLL FEE+W V E + RE
Sbjct: 169 RLTFHNAMTYNPAGQDVHVMAETLLQIFEERW-----AVIEADYNRE 210
>gi|356516581|ref|XP_003526972.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 786
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 11/229 (4%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++ +L + H++AW F PVDV L + DY+ VI PMD T+KK++ + EY N
Sbjct: 209 LMKSCENVLNRLMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGEYSNP 268
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+ DVRL F NAM YN +DVH+MA+TL FE +W + K+ + E
Sbjct: 269 MDFAADVRLTFDNAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPVIDCVASEPSRPT 328
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+++ +++ K + T N + V + ++ R + EEK+KL L +
Sbjct: 329 RVETEISDRVPPTKKKKITPN---DSSVKPEPVK-------RIVTVEEKQKLSLELETMI 378
Query: 284 PEDLGKALEIV-AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
E ++ + QS Q +E+E+D+D S+ TL++L+ + D +
Sbjct: 379 GELPDSIVDFLREQSYNEGQTNDDEIEIDIDTLSDDTLFKLRKLLDDYM 427
>gi|295828214|gb|ADG37776.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828218|gb|ADG37778.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +HK W F PVDVKGLGL DY+ +I+ PMD TIK + YK+ RE DV
Sbjct: 109 LLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNXYKSPREFADDV 168
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
RL F NAM YN DVH+MA+TLL FEE+W V E + RE
Sbjct: 169 RLTFHNAMTYNPAGQDVHLMAETLLQIFEERW-----AVIEADYNRE 210
>gi|217074676|gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 171/393 (43%), Gaps = 68/393 (17%)
Query: 36 IFQKVDKLEERVNEIE--QFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRR 93
+ ++D++ + IE +F + G +K S + K +R P A +
Sbjct: 82 LVSELDQIRQHKTRIESGEFKPRLNHNGGGPNKKSGSKKFSGNKRPFP--------AEKE 133
Query: 94 EKAAEKRMEELIRQFGTILRNITQHK--W---AWPFMQPVDVKGLGLDDYYEVIDKPMDF 148
K ++ + + ++ G IL + ++K W W F PV+ L L DY+++I PMD
Sbjct: 134 LKKSKSEIGDAMKACGQILTKLMKNKSGWIFNTWIFNTPVNATALNLHDYFDIIKHPMDL 193
Query: 149 STIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
T+K ++ Y E DV+L FKNA+ YN + DV+ A LL KFEE + + K
Sbjct: 194 GTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEK 253
Query: 209 VTEE--------------EKRREEEEAE------------AQLDMQLAQDAAHAKMARDT 242
E+ E RE E+ + A+ L + A+ + +
Sbjct: 254 FDEKSFDDELQASSWNHVEPEREREKVKKKDNPIPIPPPVAKRQESLPEPASTSNQPSTS 313
Query: 243 SNELYEVDVHL-DELREMLVQKC------------RKTSTEEKRKLGAALTRLSPEDLGK 289
+ +L + V + +R + V+ R+ + EEK KLG L L PE + +
Sbjct: 314 NPQLAQSPVRIPSPMRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQ 373
Query: 290 ALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKD------ALKSQG--NNNNND 341
++I+ + N + +E+ELDM+A TLW L V + +K Q +NNN
Sbjct: 374 VVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVP 433
Query: 342 NNKNNNNSATNNNKRKREICDAIAKTAKKKKQK 374
+NK N RE DA + KK++K
Sbjct: 434 SNKGNGELPD------REKVDATPPSEGKKQKK 460
>gi|357476127|ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing protein [Medicago truncatula]
Length = 533
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 170/390 (43%), Gaps = 67/390 (17%)
Query: 37 FQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKA 96
++ +L+ R+ E +F + G +K S + K +R P A + K
Sbjct: 86 LDQIRQLKTRI-ESGEFKPRLNHNGGGPNKKSGSKKFSGNKRPFP--------AEKELKK 136
Query: 97 AEKRMEELIRQFGTILRNITQHK--W---AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
++ + + ++ G IL + ++K W W F PV+ L L DY+++I PMD T+
Sbjct: 137 SKSEIGDAMKACGQILTKLMKNKSGWIFNTWIFNTPVNATALNLHDYFDIIKHPMDLGTV 196
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
K ++ Y E DV+L FKNA+ YN + DV+ A LL KFEE + + K E
Sbjct: 197 KSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDE 256
Query: 212 E--------------EKRREEEEAE------------AQLDMQLAQDAAHAKMARDTSNE 245
+ E RE E+ + A+ L + A+ + ++ +
Sbjct: 257 KSFDDELQASSWNHVEPEREREKVKKKDNPIPIPPPVAKRQESLPEPASTSNQPSTSNPQ 316
Query: 246 LYEVDVHL-DELREMLVQKC------------RKTSTEEKRKLGAALTRLSPEDLGKALE 292
L + V + +R + V+ R+ + EEK KLG L L PE + + ++
Sbjct: 317 LAQSPVRIPSPMRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQ 376
Query: 293 IVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKD------ALKSQG--NNNNNDNNK 344
I+ + N + +E+ELDM+A TLW L V + +K Q +NNN +NK
Sbjct: 377 IIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNK 436
Query: 345 NNNNSATNNNKRKREICDAIAKTAKKKKQK 374
N RE DA + KK++K
Sbjct: 437 GNGELPD------REKVDATPPSEGKKQKK 460
>gi|327488240|sp|Q9LXA7.2|GTE2_ARATH RecName: Full=Transcription factor GTE2; AltName:
Full=Bromodomain-containing protein GTE2; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E2
Length = 581
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 71/103 (68%)
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+EK ++ ++ G IL + +HKW+W F+ PVDV GLGL DY+ ++DKPMD T+K +E
Sbjct: 167 SEKVLKSMMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLE 226
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
Y++ + +DVRL F NAM YN + DV++MA+ LL++F+
Sbjct: 227 KGLYRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFD 269
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ + +EK KLG L L PE LG+ ++I+ + +E+ELD++A TLW L
Sbjct: 397 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 456
Query: 325 FFV 327
FV
Sbjct: 457 RFV 459
>gi|295828216|gb|ADG37777.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +HK W F PVDVKGLGL DY+ +I+ PMD TIK + YK+ RE DV
Sbjct: 109 LLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDV 168
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
RL F NAM YN DVH+MA+TLL FEE+W V E + RE
Sbjct: 169 RLTFHNAMTYNPAGQDVHLMAETLLQIFEERW-----AVIEADYNRE 210
>gi|295828210|gb|ADG37774.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828220|gb|ADG37779.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +HK W F PVDVKGLGL DY+ +I+ PMD TIK + YK+ RE DV
Sbjct: 109 LLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDV 168
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
RL F NAM YN DVH+MA+TLL FEE+W V E + RE
Sbjct: 169 RLTFHNAMTYNPAGQDVHLMAETLLQIFEERW-----AVIEADYNRE 210
>gi|15238195|ref|NP_196617.1| global transcription factor group E2 [Arabidopsis thaliana]
gi|7671448|emb|CAB89388.1| bromodomain protein-like [Arabidopsis thaliana]
gi|332004179|gb|AED91562.1| global transcription factor group E2 [Arabidopsis thaliana]
Length = 678
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 71/103 (68%)
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+EK ++ ++ G IL + +HKW+W F+ PVDV GLGL DY+ ++DKPMD T+K +E
Sbjct: 242 SEKVLKSMMTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLE 301
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
Y++ + +DVRL F NAM YN + DV++MA+ LL++F+
Sbjct: 302 KGLYRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFD 344
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ + +EK KLG L L PE LG+ ++I+ + +E+ELD++A TLW L
Sbjct: 472 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 531
Query: 325 FFV 327
FV
Sbjct: 532 RFV 534
>gi|345288391|gb|AEN80687.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288393|gb|AEN80688.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288395|gb|AEN80689.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288397|gb|AEN80690.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288399|gb|AEN80691.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288401|gb|AEN80692.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288403|gb|AEN80693.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288405|gb|AEN80694.1| AT1G06230-like protein, partial [Capsella rubella]
Length = 197
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +HK W F PVDVKGLGL DY+ +I+ PMD TIK + YK+ RE DV
Sbjct: 105 LLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNMYKSPREFADDV 164
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RL F NAM YN DVH+MA+TLL FEE+W
Sbjct: 165 RLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 196
>gi|413921385|gb|AFW61317.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 770
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 120/270 (44%), Gaps = 51/270 (18%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
+Q +L+++ H WA PF+ PVD+ L + DY++++ +PMD TI+K+M+A Y
Sbjct: 173 FKQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPP 232
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
E DVRL F NAM YN +DVH+MAKTL FE +W +L+ E+K + +E Q
Sbjct: 233 EFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRW-KLI-----EKKLPKPDEKPPQ 286
Query: 225 LDMQLAQDAAHAKMARDT-SNELYEVDVHLDEL-----------------------REML 260
D + Q + + T N V + ++L +L
Sbjct: 287 PDEKPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVPKQYIFRGEDSADSPVL 346
Query: 261 VQKCRKTS---------------------TEEKRKLGAALTRLSPEDLGKALEIVAQSNT 299
K RKTS +E+K L A L +E++
Sbjct: 347 QPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYGAFIPDHVVELIRSHAD 406
Query: 300 GFQATAEEVELDMDAQSESTLWRLKFFVKD 329
A EE+ELDMDA + TL+ L + D
Sbjct: 407 YCDANEEELELDMDALGDDTLFELLRLLDD 436
>gi|295828212|gb|ADG37775.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +HK W F PVDVKGLGL DY+ +I+ PMD TIK + YK+ RE DV
Sbjct: 109 LLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNIYKSPREFADDV 168
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
RL F NAM YN DVH+MA+TLL FEE+W V E + RE
Sbjct: 169 RLTFHNAMTYNPAGQDVHLMAETLLQIFEERW-----AVIEADYNRE 210
>gi|359491054|ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
[Vitis vinifera]
Length = 770
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 20/227 (8%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L + H++ W F PVDV L + DY+ VI PMD TIK +M + EY +
Sbjct: 211 LMKQCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYLSP 270
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LPKVTEEEKRREEEE 220
+ DVRL F NAM YN +DVH MA+TL FE +W + LP + E
Sbjct: 271 FDFAADVRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPVTIDVESL--PSR 328
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALT 280
++A L+++ A +K + + +++ + ++ R + EE+ LG L
Sbjct: 329 SDAHLEIETADRMPPSKKKKVAPTD-HKIKMEPNK---------RIMTKEERHNLGTELE 378
Query: 281 RL---SPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
L P+D+ L+ QS QA+ +E+E+D+DA S+ TL+ L+
Sbjct: 379 TLLGELPDDIVDFLK--EQSFNENQASEDEIEIDIDALSDDTLFTLR 423
>gi|413921384|gb|AFW61316.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 558
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 120/270 (44%), Gaps = 51/270 (18%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
+Q +L+++ H WA PF+ PVD+ L + DY++++ +PMD TI+K+M+A Y
Sbjct: 173 FKQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRMKAGMYSTPP 232
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
E DVRL F NAM YN +DVH+MAKTL FE +W +L+ E+K + +E Q
Sbjct: 233 EFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRW-KLI-----EKKLPKPDEKPPQ 286
Query: 225 LDMQLAQDAAHAKMARDT-SNELYEVDVHLDEL-----------------------REML 260
D + Q + + T N V + ++L +L
Sbjct: 287 PDEKPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVPKQYIFRGEDSADSPVL 346
Query: 261 VQKCRKTS---------------------TEEKRKLGAALTRLSPEDLGKALEIVAQSNT 299
K RKTS +E+K L A L +E++
Sbjct: 347 QPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYGAFIPDHVVELIRSHAD 406
Query: 300 GFQATAEEVELDMDAQSESTLWRLKFFVKD 329
A EE+ELDMDA + TL+ L + D
Sbjct: 407 YCDANEEELELDMDALGDDTLFELLRLLDD 436
>gi|297842055|ref|XP_002888909.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
gi|297334750|gb|EFH65168.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 132/291 (45%), Gaps = 42/291 (14%)
Query: 69 STLKDKEKERHVPSIRKQQQEASRR---EKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
S +K E + VP+ + + ++ A +K ++++ +L + +HK W F
Sbjct: 76 SLIKRLEPQAPVPNKKLKTANGGKKSGVHGAGDKGTVQILKSCNNLLTKLMKHKSGWVFN 135
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PVD LGL DY+ +++KPMD T+K ++ YK+ E DVRL F NAM YN
Sbjct: 136 TPVDAVRLGLHDYHTIVEKPMDLGTVKTRLSKSWYKSPLEFAEDVRLTFNNAMLYNPVGH 195
Query: 186 DVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSN- 244
DVH MA+ LL FEEKW P T+ +++ +D+ HA ++ +T N
Sbjct: 196 DVHHMAEFLLNLFEEKW---APLETQYGLLNRKQQPVRDIDL-------HAPVSTNTHNI 245
Query: 245 -----------------ELYEVDVHLDELREMLVQKC-----------RKTSTEEKRKLG 276
L + + ++ ++ R + +EKR+L
Sbjct: 246 EPFPLPPPPPPTVVENRTLERAESITNPVKPAVLPVVPEKPVEEASADRDLTFDEKRRLS 305
Query: 277 AALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
L L + L ++I+ +SN +E+ELD+D+ TLW L FV
Sbjct: 306 EDLQDLPYDKLEAVVQIIKKSNPELSQQDDEIELDIDSLDLETLWELYRFV 356
>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 759
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 20/234 (8%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L + H++AW F PVDV+ L + DY+ VI PMD T+K ++ Y +
Sbjct: 207 LMKQCETLLSRLMLHQYAWVFNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKITTGAYSSP 266
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LPKVTEEEKRREEEE 220
DVRL F NAMKYN +DVH MA+TL FE +W + LP E
Sbjct: 267 LAFAADVRLTFSNAMKYNPPGNDVHFMAETLSKYFEVRWKAIEKKLPVTIGAEPV--APR 324
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVD--VHLDELREMLVQKCRKTSTEEKRKLGAA 278
A ++ + D AK + + ++D V L+ R+++ S EEK KL
Sbjct: 325 AGIHVETETKIDPTPAKKKK-----IAQIDSMVKLEPFRQVM-------SNEEKLKLSTE 372
Query: 279 LTRLSPEDLGKALEIVAQ-SNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
L L E ++ + + S+ Q E+E+D+D S+ TL+ L+ + D L
Sbjct: 373 LEALLSELPETIIDFLKEHSHNDDQNGEVEIEIDIDTLSDDTLFELRKLLDDYL 426
>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1155
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 134/283 (47%), Gaps = 29/283 (10%)
Query: 65 SKGSSTLKDKEKERHVPSIRKQQQEASRRE--KAAEKRMEELIRQFGTILRNITQHKWAW 122
S S+ + + + S R Q+ RR E + +++ IL ++ H+ ++
Sbjct: 411 SAPSTPITKPQTTPLITSERAQRSTKGRRRVGPPTENSLTGAMKRCFDILETLSNHQHSY 470
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF+ PVD LG+ DY++V+ PMDF TI+ + + Y+ + E D RLVF NA YN
Sbjct: 471 PFLAPVDPVALGILDYFDVVKHPMDFGTIRNLLLSGVYQEMEEFAIDCRLVFSNAKDYNP 530
Query: 183 ERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDT 242
+ VH+MA TL FE K+ +L Q L ++ R
Sbjct: 531 PNNPVHIMAITLEDIFERKYSKL------------------QNTPNLETAEEVSEEER-- 570
Query: 243 SNELYEVDVHLDELREMLVQKCRKT-----STEEKRKLGAALTRLSPEDLGKALEIVAQS 297
+L E + H+ + E + ++ RK + EEK +LG ++ L PE L + IV S
Sbjct: 571 IKKLTEENKHMQKELEKMKRESRKPKQPQMTLEEKTQLGTNISFLPPERLRDLISIV--S 628
Query: 298 NTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNN 340
+T +E+ +D++ STL +++ FV L+ Q + N+
Sbjct: 629 HTLPNTAQDEIVIDLEKLDNSTLRKMEQFVFSCLREQEDYGND 671
>gi|308800642|ref|XP_003075102.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
gi|116061656|emb|CAL52374.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
Length = 1086
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 124/234 (52%), Gaps = 9/234 (3%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME-AKE 159
+E + +Q T +R + HKW +PF PVD L L Y E+I +PMD T+K +E +
Sbjct: 131 LEVVHKQCLTSVRQLIAHKWGFPFAAPVDPDALDLPTYREIIKEPMDLGTVKNLIENGGK 190
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK----R 215
Y E+ DVRL F NAMK+N E +DVH MAK LL ++E +W + ++ + E
Sbjct: 191 YVKAEEVDADVRLTFANAMKFNAEGTDVHAMAKELLVEWETRWATIQQRIADVEACCVIE 250
Query: 216 REEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKL 275
R+ EA+ + + A + K S + V++ L E++ ++ R +++ L
Sbjct: 251 RKAAEAKNEAASRRADVVSKEKECSKASEAIDLVNIQLGEVQNQVLALMRPLERDDRLNL 310
Query: 276 GAALTRLSPEDL-GKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVK 328
+ L L PE L A EI+A + TG++ A +E D+DA ++ T+ L + K
Sbjct: 311 ASELRSL-PEGLRVGAREIIAANTTGWKPAA-HLE-DVDAHNDLTIHLLARYTK 361
>gi|428176256|gb|EKX45141.1| hypothetical protein GUITHDRAFT_108789 [Guillardia theta CCMP2712]
Length = 220
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 32/223 (14%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
+++ G IL+ ++ H +W F +PVD + LGL DY+ VI +PMD T+K +E N +
Sbjct: 14 VKKCGNILKQLSAHPNSWVFNEPVDAEKLGLPDYHIVIKRPMDLGTVKSNLEKGVLANPQ 73
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
+ DV LVF+NAM YN E DVHVMAKTL FE KW Q
Sbjct: 74 QFKDDVLLVFRNAMTYNPEGHDVHVMAKTLKVLFEGKWSQ-----------------NEG 116
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSP 284
+ M +A A + T ++ D LD + + EEKR+L A++ +L
Sbjct: 117 IIMDAYNNAGSA--SESTKSKAGSEDSSLDNV---------PMTYEEKRELSASMNKLPG 165
Query: 285 EDLGKALEIVAQSNTGFQATA----EEVELDMDAQSESTLWRL 323
+ L + + + N+ + +E+E+D+D +TL +L
Sbjct: 166 KRLASVVSFIHEKNSKILMQSGDDPDELEVDIDKLDNATLRQL 208
>gi|15219397|ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName: Full=Transcription factor GTE3, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE3; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
Flags: Precursor
gi|5903104|gb|AAD55662.1|AC008017_35 Highly similar to non intermediate filament IFA binding protein
[Arabidopsis thaliana]
gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical protein; 61711-63380 [Arabidopsis thaliana]
gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis thaliana]
gi|332197298|gb|AEE35419.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
Length = 461
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 46/268 (17%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AA+K ++++ +L + +HK W F PVDV LGL DY+ +I +PMD T+K ++
Sbjct: 111 AADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRL 170
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR 215
YK+ E DVRL F NAM YN DV+ MA+ LL FEEKW +P T+ E
Sbjct: 171 SKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKW---VPLETQYELL 227
Query: 216 REEEEAEAQLDMQLAQDAAHAKMARDTSN-ELYEVDVH---------------------- 252
+++ +D HA ++ +T N E +
Sbjct: 228 IRKQQPVRDIDF-------HAPVSTNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAE 280
Query: 253 ----------LDELREMLVQKC---RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNT 299
L + E LV++ R + +EKR+L L L + L ++I+ +
Sbjct: 281 SMTNPVKPAVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTP 340
Query: 300 GFQATAEEVELDMDAQSESTLWRLKFFV 327
+E+ELD+D+ TLW L FV
Sbjct: 341 ELSQQDDEIELDIDSLDLETLWELFRFV 368
>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
Full=Bromodomain-containing protein GTE8; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 813
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 34/244 (13%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+LR + H +W F PVDV L + DY I PMD T+KK + + Y +
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-----------LQLLPKVTEE 212
E DVRL F NAM YN DVH+M L FE +W +Q LP VT E
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLE 295
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTE-E 271
+E +A + + A+ KMA +RE + + + TE E
Sbjct: 296 PN----DERKAAISVPPAK---KRKMA--------------SPVRESVPEPVKPLMTEVE 334
Query: 272 KRKLGAALTRLSPEDLGKALEIVAQSNT-GFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
+ +LG L L E ++ + + N+ G + +E+E+D+D S+ L L+ + +
Sbjct: 335 RHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEY 394
Query: 331 LKSQ 334
++++
Sbjct: 395 IQNK 398
>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
Length = 818
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 34/244 (13%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+LR + H +W F PVDV L + DY I PMD T+KK + + Y +
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-----------LQLLPKVTEE 212
E DVRL F NAM YN DVH+M L FE +W +Q LP VT E
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLE 295
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTE-E 271
+E +A + + A+ KMA +RE + + + TE E
Sbjct: 296 PN----DERKAAISVPPAK---KRKMA--------------SPVRESVPEPVKPLMTEVE 334
Query: 272 KRKLGAALTRLSPEDLGKALEIVAQSNT-GFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
+ +LG L L E ++ + + N+ G + +E+E+D+D S+ L L+ + +
Sbjct: 335 RHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEY 394
Query: 331 LKSQ 334
++++
Sbjct: 395 IQNK 398
>gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 46/268 (17%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AA+K ++++ +L + +HK W F PVDV LGL DY+ +I +PMD T+K ++
Sbjct: 111 AADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLETVKTRL 170
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR 215
YK+ E DVRL F NAM YN DV+ MA+ LL FEEKW +P T+ E
Sbjct: 171 SKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKW---VPLETQYELL 227
Query: 216 REEEEAEAQLDMQLAQDAAHAKMARDTSN-ELYEVDVH---------------------- 252
+++ +D HA ++ +T N E +
Sbjct: 228 IRKQQPVRDIDF-------HAPVSTNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAE 280
Query: 253 ----------LDELREMLVQKC---RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNT 299
L + E LV++ R + +EKR+L L L + L ++I+ +
Sbjct: 281 SMTNPVKPAVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTP 340
Query: 300 GFQATAEEVELDMDAQSESTLWRLKFFV 327
+E+ELD+D+ TLW L FV
Sbjct: 341 ELSQQDDEIELDIDSLDLETLWELFRFV 368
>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 764
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 34/244 (13%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+LR + H +W F PVDV L + DY I PMD T+KK + + Y +
Sbjct: 127 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 186
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-----------LQLLPKVTEE 212
E DVRL F NAM YN DVH+M L FE +W +Q LP VT E
Sbjct: 187 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLE 246
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTE-E 271
+E +A + + A+ KMA +RE + + + TE E
Sbjct: 247 PN----DERKAAISVPPAK---KRKMA--------------SPVRESVPEPVKPLMTEVE 285
Query: 272 KRKLGAALTRLSPEDLGKALEIVAQSNT-GFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
+ +LG L L E ++ + + N+ G + +E+E+D+D S+ L L+ + +
Sbjct: 286 RHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEY 345
Query: 331 LKSQ 334
++++
Sbjct: 346 IQNK 349
>gi|1588281|prf||2208296A RING3 protein
Length = 509
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 17/222 (7%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+++I PMD ST+K++ME ++Y++ +E DVRL+F N K
Sbjct: 203 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYK 262
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLD--------MQLAQ 231
YN DV MA+ L FE ++ ++ E E+ R E A L + +
Sbjct: 263 YNPPDHDVVAMARKLQDVFEFRYAKM---PDEPEQLRAVHEQLAALSQGPISKPKRKREK 319
Query: 232 DAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKAL 291
K T+ +E E R S +EKR+L + +L E LG+ +
Sbjct: 320 KEKKKKRKAKTAPPALPTGYDSEEEEE-----SRPMSYDEKRQLSLDINKLPGEKLGRVV 374
Query: 292 EIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFFVKDALK 332
I+ + + EE+E+D + STL L+ +V L+
Sbjct: 375 HIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLR 416
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|42407711|dbj|BAD08859.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
gi|125602058|gb|EAZ41383.1| hypothetical protein OsJ_25901 [Oryza sativa Japonica Group]
Length = 791
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 65/100 (65%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
E +Q G +L+N+ +H+WA PF+ PVDV L + DY+++I KPMD TI+K++ A Y
Sbjct: 161 EAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYST 220
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+ DVRL F NA+ YN +DV++M KTL FE +W
Sbjct: 221 PWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRW 260
>gi|125560007|gb|EAZ05455.1| hypothetical protein OsI_27669 [Oryza sativa Indica Group]
Length = 791
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 65/100 (65%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
E +Q G +L+N+ +H+WA PF+ PVDV L + DY+++I KPMD TI+K++ A Y
Sbjct: 161 EAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYST 220
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+ DVRL F NA+ YN +DV++M KTL FE +W
Sbjct: 221 PWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRW 260
>gi|120577456|gb|AAI30180.1| Brd2-a protein [Xenopus laevis]
Length = 518
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S Q S +K S L +E R + +K ++ + + + + ++ E ++ IL+ +
Sbjct: 277 SPIQASETKPSKILARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLS 336
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV LGL DYY++I PMD STIKK+M+++E+K+ +E +RL+F
Sbjct: 337 KKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQEFAAAIRLMF 396
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN DV MA+ L FE + ++
Sbjct: 397 SNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H+++WPF QPVD LGL DY+++I +PMD T+KK++E Y + E D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA++L E+ +LQ + ++ +EE+
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSL----EKMFLQKVAQMPQEEQ 165
>gi|224103835|ref|XP_002313212.1| global transcription factor group [Populus trichocarpa]
gi|222849620|gb|EEE87167.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 16/224 (7%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++ IL + + K + F PVDV GL L DY+++I PMD T+K + Y++
Sbjct: 1 LMKNCSQILSKLMKQKLGYIFNTPVDVVGLQLHDYHDIIKNPMDLGTVKTNLSKNLYESP 60
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
R+ DVRL F NAMKYN + +V+++A+ L +F++ + + +E+++
Sbjct: 61 RDFAADVRLTFNNAMKYNPKGHEVYILAEQFLTRFQDLYRPI----------KEKQQQPT 110
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
++ + M L + + + R+ + EEK KLG L L
Sbjct: 111 GMNQNPNSVRTPSPMRVPQVKPLKQPKPKAKDPNK------REMNLEEKHKLGVGLQSLP 164
Query: 284 PEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
E + + ++I+ + N + +E+ELD++A TLW L FV
Sbjct: 165 QEKMEQVVQIIRKRNGHLRQEGDEIELDIEAVDTETLWELDRFV 208
>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
Length = 549
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 14/231 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L+ + H++ W F PVDV L + DY+ VI+ PMD T+K ++ + Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN +DV+VMA TL FE +W L K++ + E +A
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDA 256
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRL 282
+ + AK + T+ VD E +V ++ T+E R KLG L L
Sbjct: 257 HKEKHIVIPVPMAKKRKTTA-----VDC------ENVVDPAKRVMTDEDRLKLGKDLESL 305
Query: 283 SPEDLGKALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFVKDALK 332
+ E + + + N+ +E+E+D++ S+ L++L+ + + L+
Sbjct: 306 T-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|302848828|ref|XP_002955945.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
gi|300258671|gb|EFJ42905.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
Length = 569
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 22/259 (8%)
Query: 100 RMEELI-RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
R+ E++ + T L++ITQHKWA+PF PVD DY ++I PMDFSTIK + +
Sbjct: 81 RLAEVVQKHCSTALKSITQHKWAFPFNNPVDTARF--PDYPKIISSPMDFSTIKARQDGG 138
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL-PKVTEEEKRRE 217
Y++ ++ +DV LVF NA +YN SD ++MA+TL EEK+ +++ P++ E E
Sbjct: 139 YYRDPKDWWSDVMLVFSNAKRYNAPGSDCYLMAQTLQEVSEEKYDKVIAPRLAEAEAVTL 198
Query: 218 EEEAE-----AQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEK 272
EE A+L Q +A A+ A N + E+ + E + + C + EEK
Sbjct: 199 REEVHLKKKRAELVNQQISEAMDAQCAV-LFNLMAELHAAIREAKSLASSLCEPLTLEEK 257
Query: 273 RKLGAALTRLSPEDLGKALEIVAQSNTGFQATAE------------EVELDMDAQSESTL 320
+ L A + L L + VA + +T E +V+L++ L
Sbjct: 258 QALAATIQGLPTAQLEAIVAFVASRHPPSVSTCEVQPGAAGGVPSRKVQLNLGRYDPLLL 317
Query: 321 WRLKFFVKDALKSQGNNNN 339
+L+ V ++ N N
Sbjct: 318 RQLQHLVSTCTAARQQNQN 336
>gi|297734375|emb|CBI15622.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 106/227 (46%), Gaps = 50/227 (22%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L + H++ W F PVDV L + DY+ VI PMD TIK +M + EY +
Sbjct: 160 LMKQCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGEYLSP 219
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LPKVTEEEKRREEEE 220
+ DVRL F NAM YN +DVH MA+TL FE +W + LPKV + + + E
Sbjct: 220 FDFAADVRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPKVAPTDHKIKMEP 279
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALT 280
+ R + EE+ LG L
Sbjct: 280 NK------------------------------------------RIMTKEERHNLGTELE 297
Query: 281 RL---SPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
L P+D+ L+ QS QA+ +E+E+D+DA S+ TL+ L+
Sbjct: 298 TLLGELPDDIVDFLK--EQSFNENQASEDEIEIDIDALSDDTLFTLR 342
>gi|17064912|gb|AAL32610.1| Unknown protein [Arabidopsis thaliana]
gi|20259928|gb|AAM13311.1| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 34/244 (13%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+LR + H +W F PVDV L + DY I PMD T+KK + + Y +
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-----------LQLLPKVTEE 212
E DVRL F +AM YN DVH+M L FE +W +Q LP VT E
Sbjct: 236 HEFAADVRLTFTDAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLE 295
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTE-E 271
+E +A + + A+ KMA +RE + + + TE E
Sbjct: 296 PN----DERKAAISVPPAK---KRKMA--------------SPVRESVPEPVKPLMTEVE 334
Query: 272 KRKLGAALTRLSPEDLGKALEIVAQSNT-GFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
+ +LG L L E ++ + + N+ G + +E+E+D+D S+ L L+ + +
Sbjct: 335 RHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEY 394
Query: 331 LKSQ 334
++++
Sbjct: 395 IQNK 398
>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L+ + H +W F PVDV L + DY +I PMD T+KK + + Y +
Sbjct: 176 LMKQCDTLLKKLWSHPHSWVFQAPVDVVKLNIPDYLTIIKHPMDLGTVKKNLASGVYSSP 235
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW-----------LQLLPKVTEE 212
E DVRL F NAM YN DVH+M L FE +W +Q LP +T E
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIEKKLPACSMQTLPAITLE 295
Query: 213 EKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTST-EE 271
+E +A + + A+ KMA +RE + + + T EE
Sbjct: 296 PN----DERKAAISVPPAK---KRKMA--------------SPVRESVPEPVKPLMTAEE 334
Query: 272 KRKLGAALTRLSPEDLGKALEIV-AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDA 330
+ +LG L L E ++ + S+ G + +E+E+D+D S+ L L+ + +
Sbjct: 335 RHRLGRQLESLLDELPAHIIDFLKKHSSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEY 394
Query: 331 LKSQGNNNNN 340
++++ +N
Sbjct: 395 IQNKETKQSN 404
>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
Length = 411
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
+L+ G +L + +H++ W F +PVD K L L DYY++I PMD T+K ++ YK+
Sbjct: 30 DLVIGCGELLGKLMKHQYGWVFNEPVDAKKLKLHDYYKIIKHPMDLGTVKSRLSKNWYKS 89
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+E DVRL F NAMKYN++ DVH MA LL FEE W
Sbjct: 90 PKEFAEDVRLTFNNAMKYNEKGQDVHAMADKLLKIFEENW 129
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 270 EEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKD 329
EEK+KL L L E L ++I+ + N G +E+E+D+D+ TLW L +V +
Sbjct: 256 EEKQKLSIHLQSLPSEKLESVVQIIRKRNPGLFQQEDEIEVDIDSFDNETLWELHGYVTN 315
Query: 330 ALKSQGNN 337
KS G N
Sbjct: 316 YQKSMGKN 323
>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
Length = 703
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 14/231 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L+ + H++ W F PVDV L + DY+ VI+ PMD T+K ++ + Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN +DV+VMA TL FE +W L K++ + E +A
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDA 256
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRL 282
+ + AK + T+ VD E +V ++ T+E R KLG L L
Sbjct: 257 HKEKHIVIPVPMAKKRKTTA-----VDC------ENVVDPAKRVMTDEDRLKLGKDLESL 305
Query: 283 SPEDLGKALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFVKDALK 332
+ E + + + N+ +E+E+D++ S+ L++L+ + + L+
Sbjct: 306 T-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
AltName: Full=Bromodomain-containing protein GTE9;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E9
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 688
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 14/231 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L+ + H++ W F PVDV L + DY+ VI+ PMD T+K ++ + Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN +DV+VMA TL FE +W L K++ + E +A
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDA 256
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRL 282
+ + AK + T+ VD E +V ++ T+E R KLG L L
Sbjct: 257 HKEKHIVIPVPMAKKRKTTA-----VDC------ENVVDPAKRVMTDEDRLKLGKDLESL 305
Query: 283 SPEDLGKALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFVKDALK 332
+ E + + + N+ +E+E+D++ S+ L++L+ + + L+
Sbjct: 306 T-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|359488601|ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
Length = 739
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 120/231 (51%), Gaps = 12/231 (5%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L+ + H+ W F +PVD+ L + DY+ +I PMD TIK ++ + Y +
Sbjct: 174 LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSP 233
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+ DVRL F NA +N +DVH MA TL FE +W + K+ + + +
Sbjct: 234 LDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGT 293
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+M+ A+ +K + TS H + ++E VQK + +EKR LG L L
Sbjct: 294 HGEMKTAKPMPPSKKRKVTS-------THHEVIQEP-VQKV--MTADEKRNLGRDLEDLL 343
Query: 284 PEDLGKALEIVAQSNTGFQATAE--EVELDMDAQSESTLWRLKFFVKDALK 332
E + ++ + ++ + T E E+E+D++A S+ TL+ L+ + D L+
Sbjct: 344 GEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTLRKLLDDYLQ 394
>gi|54311476|gb|AAH84758.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 525
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S Q S +K + L +E R + +K ++ + + + + ++ E ++ IL+ +
Sbjct: 277 SPIQASETKPAKILARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLS 336
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV LGL DYY++I PMD STIKK+M+++E+K+ +E +RL+F
Sbjct: 337 KKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQEFAAAIRLMF 396
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN DV MA+ L FE + ++
Sbjct: 397 SNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H+++WPF QPVD LGL DY+++I +PMD T+KK++E Y + E D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA++L E+ +LQ + ++ +EE+
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSL----EKMFLQKVAQMPQEEQ 165
>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 689
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 14/231 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L+ + H++ W F PVDV L + DY+ VI+ PMD T+K ++ + Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN +DV+VMA TL FE +W L K++ + E +A
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDA 256
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRL 282
+ + AK + T+ VD E +V ++ T+E R KLG L L
Sbjct: 257 HKEKHIVIPVPMAKKRKTTA-----VDC------ENVVDPAKRVMTDEDRLKLGKDLESL 305
Query: 283 SPEDLGKALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFVKDALK 332
+ E + + + N+ +E+E+D++ S+ L++L+ + + L+
Sbjct: 306 T-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|27696271|gb|AAH43784.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 539
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S Q S +K L +E R + +K ++ + + + + ++ E ++ IL+ +
Sbjct: 297 SPIQASETKPGKILARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLS 356
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV LGL DYY++I PMD STIKK+M+++E+K+ +E +RL+F
Sbjct: 357 KKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQEFAAAIRLMF 416
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN DV MA+ L FE + ++
Sbjct: 417 SNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 447
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H+++WPF QPVD LGL DY+++I +PMD T+KK++E Y + E D
Sbjct: 86 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 145
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA++L E+ +LQ + ++ +EE+
Sbjct: 146 NTMFTNCYIYNKPTDDIVLMAQSL----EKMFLQKVAQMPQEEQ 185
>gi|296090258|emb|CBI40077.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 16/238 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L+ + H+ W F +PVD+ L + DY+ +I PMD TIK ++ + Y +
Sbjct: 151 LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIASGAYSSP 210
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+ DVRL F NA +N +DVH MA TL FE +W + K+ + + +
Sbjct: 211 LDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGT 270
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+M+ A+ +K + TS H + ++E VQK + +EKR LG L L
Sbjct: 271 HGEMKTAKPMPPSKKRKVTS-------THHEVIQEP-VQKV--MTADEKRNLGRDLEDLL 320
Query: 284 PEDLGKALEIVAQSNTGFQATAE--EVELDMDAQSESTLWRLKFFVKDAL----KSQG 335
E + ++ + ++ + T E E+E+D++A S+ TL+ L+ + D L KS G
Sbjct: 321 GEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTLRKLLDDYLQEKQKSHG 378
>gi|161611729|gb|AAI55902.1| Brd2-a protein [Xenopus laevis]
Length = 517
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S Q S +K L +E R + +K ++ + + + + ++ E ++ IL+ +
Sbjct: 277 SPIQASETKPGKILARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLS 336
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV LGL DYY++I PMD STIKK+M+++E+K+ +E +RL+F
Sbjct: 337 KKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQEFAAAIRLMF 396
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN DV MA+ L FE + ++
Sbjct: 397 SNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H+++WPF QPVD LGL DY+++I +PMD T+KK++E Y + E D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA++L E+ +LQ + ++ +EE+
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSL----EKMFLQKVAQMPQEEQ 165
>gi|76780317|gb|AAI06310.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 517
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S Q S +K L +E R + +K ++ + + + + ++ E ++ IL+ +
Sbjct: 277 SPIQASETKPGKILARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLS 336
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV LGL DYY++I PMD STIKK+M+++E+K+ +E +RL+F
Sbjct: 337 KKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSREFKDAQEFAAAIRLMF 396
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN DV MA+ L FE + ++
Sbjct: 397 SNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H+++WPF QPVD LGL DY+++I +PMD T+KK++E Y + E D
Sbjct: 66 VVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRLENNYYWSALECMQDF 125
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA++L E+ +LQ + ++ +EE+
Sbjct: 126 NTMFTNCYIYNKPTDDIVLMAQSL----EKMFLQKVAQMPQEEQ 165
>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
Length = 613
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 67 GSSTLKDKE-----KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA 121
GS T D E K+ V SI + ++S KAA + +IR G I+R + HK
Sbjct: 20 GSDTDSDVEGSKPSKKSGVTSISTCEHQSSYNLKAASMKSSRMIRLCGNIVRKLIDHKGG 79
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
W F PVD + DY++VI PMD T+K ++ K+Y ++ E DVRL F NAMKYN
Sbjct: 80 WLFKDPVDPDLYKIPDYFDVIRNPMDLGTVKNKLTKKKYVSIEEFAADVRLTFSNAMKYN 139
Query: 182 DERSDVHVMAKTLLAKFEEKW 202
+DVH A+ L F+ +W
Sbjct: 140 PPGNDVHAFARELNEIFDSEW 160
>gi|303285596|ref|XP_003062088.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226456499|gb|EEH53800.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 476
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 115/207 (55%), Gaps = 5/207 (2%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AA++++E + +Q ++ + HKW++PF++PVD LGL++Y++++ +PMD T++ +
Sbjct: 56 AAKRKLEIVSKQCLASVKQVMSHKWSFPFVKPVDAAALGLENYHDIVKQPMDLGTVRANI 115
Query: 156 E-AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE--E 212
E Y E+ DV L F NAM YN ++DVHVMA TL +E +W + KV E E
Sbjct: 116 EKGGVYAACEEVNRDVELTFANAMLYNGAQTDVHVMAATLKQFWEPRWAVIQEKVAEVDE 175
Query: 213 EKRREEEEAEAQ-LDMQLAQDAAHAKM-ARDTSNELYEVDVHLDELREMLVQKCRKTSTE 270
E+E AE + +M Q A +M +L ++ L++L+ V+ R
Sbjct: 176 SMTAEKESAEKKSAEMHARQTLAAEEMRCAGLMADLDQLKRSLEDLKRTSVRITRPMDER 235
Query: 271 EKRKLGAALTRLSPEDLGKALEIVAQS 297
EK++L + +L +A +++A++
Sbjct: 236 EKKRLANTMMKLPRRYREEARDVIAET 262
>gi|226530258|ref|NP_001151218.1| bromodomain containing protein [Zea mays]
gi|195645110|gb|ACG42023.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
++ G IL + + K + F PV+V+ LGL DY+ VI +PMD T+K+ + A Y + +
Sbjct: 107 KRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDD 166
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE-EAEAQ 224
DVRL F NA++YN +VH A LLA FE + + L + EE KR E A+
Sbjct: 167 FAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPRPVAAE 226
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSP 284
L A + AK N V + + RE R+ S EEK L L L
Sbjct: 227 LPPPPAVEPVEAKAKTRAGN----VRMRKPKARE---PNKREMSLEEKNMLRLGLVSLPE 279
Query: 285 EDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
E + L+IV + N + +E+ELD+D T W L FV
Sbjct: 280 EKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFV 322
>gi|357476121|ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing protein [Medicago truncatula]
Length = 518
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 162/374 (43%), Gaps = 55/374 (14%)
Query: 37 FQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKA 96
+++ +L+ R+ E + +S G ++K S+ K +R P A + K
Sbjct: 90 LEQIRQLQTRI-ESGELKSRSSHNGGGSAKKSANKKFSGNKRPFP--------AEKELKR 140
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ G IL+ + + K W F PVD L L DY+++I PMD T+K ++
Sbjct: 141 SKSEVGSAMKACGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLA 200
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE---- 212
Y E DV+L FKNA+ YN + DV+ A LL KFEE + + K E+
Sbjct: 201 KNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDD 260
Query: 213 ----------EKRREEEEAEAQLD-----------MQLAQDAAHAKMARDTSNE--LYEV 249
E RE E + + + +L + A TSN L +
Sbjct: 261 ELQASSWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQS 320
Query: 250 DVHL-DELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEV 308
V R + V+ ++ +T LG L PE + + ++I+ + N + +E+
Sbjct: 321 PVRTPSPTRALPVKPLKQPNTS--WDLGCRF--LPPEKMEQVVQIIRKRNGHLEQDGDEI 376
Query: 309 ELDMDAQSESTLWRLKFFVKD------ALKSQG--NNNNNDNNKNNNNSATNNNKRKREI 360
ELDM+A TLW L V + +K Q +NNN +NK N RE
Sbjct: 377 ELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNGELP------DREK 430
Query: 361 CDAIAKTAKKKKQK 374
DA + KK++K
Sbjct: 431 VDATPPSEGKKQKK 444
>gi|357474555|ref|XP_003607562.1| Bromodomain-containing factor [Medicago truncatula]
gi|355508617|gb|AES89759.1| Bromodomain-containing factor [Medicago truncatula]
Length = 980
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ ++L + +H++AW F PVDV GLGL DY+ +I PMD T+K ++ YK+
Sbjct: 655 FFKSCSSLLEKLMKHQYAWVFNTPVDVDGLGLHDYFTIITNPMDLGTVKTRLNKNWYKSP 714
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+E DVRL F NAM YN + DVH MA+ L FE++W
Sbjct: 715 KEFAEDVRLTFHNAMTYNPKGQDVHAMAEQLSKIFEDRW 753
>gi|413919577|gb|AFW59509.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
++ G IL + + K + F PV+V+ LGL DY+ VI +PMD T+K+ + A Y + +
Sbjct: 107 KRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYASHDD 166
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE-EAEAQ 224
DVRL F NA++YN +VH A LLA FE + + L + EE KR E A+
Sbjct: 167 FAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPRPVAAE 226
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSP 284
L A + AK N V + + RE R+ S EEK L L L
Sbjct: 227 LPPPPAVEPVEAKAKTRAGN----VRMRKPKARE---PNKREMSLEEKNMLRLGLVSLPE 279
Query: 285 EDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
E + L+IV + N + +E+ELD+D T W L FV
Sbjct: 280 EKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFV 322
>gi|297789895|ref|XP_002862870.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
gi|297308629|gb|EFH39129.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%)
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+EK + ++ G IL + +HKWAW F PVDV GLGL DY++V+ KPMD T+K ++
Sbjct: 162 SEKLLAGMLNTCGQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLD 221
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
Y + + TDVRL F NAM YN + DV+ MA LL F+
Sbjct: 222 KGFYVSPIDFATDVRLTFNNAMTYNPKGQDVYFMADKLLDHFD 264
>gi|297797597|ref|XP_002866683.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
gi|297312518|gb|EFH42942.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query: 79 HVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDY 138
+V +++ Q A+ + +EK + ++ G IL + +HKWAW F PVDV GLGL DY
Sbjct: 145 NVSGLKRGNQFATS-DPESEKLLAGMLNTCGQILVKLMKHKWAWVFNTPVDVVGLGLHDY 203
Query: 139 YEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKF 198
++V+ KPMD T+K ++ Y + + TDVRL F NAM YN + DV+ MA LL F
Sbjct: 204 HQVVKKPMDLGTVKLNLDKGFYVSPIDFATDVRLTFNNAMTYNPKGQDVYFMADKLLDHF 263
Query: 199 E 199
+
Sbjct: 264 D 264
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEK KLG L L PE LG+ ++I+ + N +E+ELD++A TLW L
Sbjct: 393 RLMTMEEKSKLGMNLQDLPPEKLGQLVQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 452
Query: 325 FFV 327
FV
Sbjct: 453 RFV 455
>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
Length = 709
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 110/231 (47%), Gaps = 20/231 (8%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L + H++ W F PVDV L + DY+ +I PMD T+K ++ + EY +
Sbjct: 165 LMKQCEALLNRLMAHQFGWIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKIVSGEYSSP 224
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LPKVTEEEKRRE--- 217
DVRL F NAMKYN +DVH MA+TL FE +W + LP T E
Sbjct: 225 LGFAADVRLTFSNAMKYNPPGNDVHSMAETLRKYFEVRWKVIEKKLPVTTGVESMPSRID 284
Query: 218 ---EEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRK 274
E E ++ + A K + T + + V + +R R S EK+K
Sbjct: 285 VHIERETTVHIERETTTSAPPLKKKKITPS---DNKVKPEPVR-------RVMSNAEKQK 334
Query: 275 LGAALTRLSPEDLGKALEIVAQ-SNTGFQATAEEVELDMDAQSESTLWRLK 324
L L L E +E + + S Q +E+E+D+DA + TL+ L+
Sbjct: 335 LSMELEALLGELPESIIEFLKEHSGNAGQTGEDEIEIDIDALGDDTLFNLR 385
>gi|359475584|ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
R ++ R K + L++ G L + +HK +W F PVDV G+GL DY+++I
Sbjct: 150 RPPPFDSGRGPKRSAAENASLMKLCGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIK 209
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
+PMD T+K ++ Y + + DVRL F NA+ YN + DVHVMA+ LLA+FE+ +
Sbjct: 210 RPMDLGTVKSKIAKNLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFK 269
Query: 204 QLLPKVTEEEKRRE 217
+ K+ E+E+ +E
Sbjct: 270 PVYNKLEEDERDQE 283
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ S EEK KLG L L E + + ++I+++ N +E+ELD++A TLW L
Sbjct: 387 REMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELD 446
Query: 325 FFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKK 370
V + K + NNN+++ N + + + A+AK KK
Sbjct: 447 RLVTN-WKKMVSKIKRQALMVNNNTSSMNERTEPSLAPAMAKKPKK 491
>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
Length = 847
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Query: 88 QEASRREKAAEKRMEELIRQFGTI--LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKP 145
Q + + K K E++ +G + L + ++AWPF +PVDV+GLGL DYY+VI+ P
Sbjct: 354 QSPAMKHKYKGKLNEQMKFCYGIVKELLSKRHSEYAWPFYKPVDVEGLGLHDYYDVIEVP 413
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD T+++++E +EY + E DVRL+F N +YN +V MAKT+ FE+++ QL
Sbjct: 414 MDLGTVRRKLECREYGSPSEFAADVRLIFSNCYRYNPPDHEVVKMAKTISEIFEQRFAQL 473
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+LR + +HK +WPF +PVD L L DY+++I +PMD TI+K++ Y + ++ D
Sbjct: 109 VLRAVLRHKHSWPFSKPVDAAKLNLVDYHDIIKRPMDLGTIEKRLRNCYYYSSQQSMQDF 168
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN SD+ VMA+ L F EK +
Sbjct: 169 MTMFTNCYTYNPPGSDIVVMAQALEKVFLEKIAHM 203
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 264 CRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWR 322
C+ T+ +EKR+L + +L + LG+ ++I+ + + +E+E+D + +TL
Sbjct: 677 CKPTTYDEKRQLSLDINKLPGDKLGRVVQIIQAREPALRLSNLDEIEIDFETLKPATLRE 736
Query: 323 LKFFVKDALK 332
L+ +V LK
Sbjct: 737 LEAYVASCLK 746
>gi|195999880|ref|XP_002109808.1| hypothetical protein TRIADDRAFT_20501 [Trichoplax adhaerens]
gi|190587932|gb|EDV27974.1| hypothetical protein TRIADDRAFT_20501, partial [Trichoplax
adhaerens]
Length = 470
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PV+ + LGL DYYE+I PMD T+K + E EYK + E DVRL+F N K
Sbjct: 170 YAWPFYEPVNAEKLGLTDYYEIIKHPMDLGTVKDKFEKLEYKAINEFAADVRLIFTNCYK 229
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMA 239
YN D+ MA+ L FE K+ Q+ + T + + ++ ++ + Q +
Sbjct: 230 YNPSDHDIVNMARRLQDVFEFKYAQIPDESTNTKGKASKKSSQGTSKPKPKQPVKKKQRK 289
Query: 240 RDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNT 299
+ + + + + V + +EKR+L + +L + LG+ + I+
Sbjct: 290 KTPPPKKRKKSYNSE------VLDVEPMTYDEKRQLSLDINKLPGDKLGRVVHIIQSREP 343
Query: 300 GF-QATAEEVELDMDAQSESTLWRLKFFVKDALKSQ 334
++ EE+E+D + STL L+ +V+ LK Q
Sbjct: 344 ALRESNPEEIEIDFETLKPSTLRELERYVQSTLKRQ 379
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
+R T++ + +H++AWPF QPVD L L DY+++I KPMD TIK+++E K Y + +
Sbjct: 7 LRFLKTVIDGLWKHRYAWPFRQPVDPVKLQLPDYFKIIKKPMDLGTIKRKLEGKMYHSAK 66
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
E D+ F N YN D+ +M + L +++K Q+ +V
Sbjct: 67 ECMDDILRTFTNCYTYNKTSDDIVLMCEELEKVYKKKLAQMPAQV 111
>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 565
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 59/99 (59%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q TIL+++ H ++W F +PVD L + DY+ +I PMD TIK ++E Y E
Sbjct: 82 QCATILKSLMSHTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNIYSGTEEF 141
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
DVRL F NAMKYN +DVH+MAK L F+ KW L
Sbjct: 142 AADVRLTFSNAMKYNPPSNDVHLMAKELSKIFDRKWKDL 180
>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 566
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 59/96 (61%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q TIL+++ H ++W F++PVD L + DY+ +I PMD TIK ++E Y E
Sbjct: 82 QCATILKSLMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNIYSGTEEF 141
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAMKYN +DVH+MAK L F+ KW
Sbjct: 142 ADDVRLTFSNAMKYNPPGNDVHMMAKELSKIFDRKW 177
>gi|159491100|ref|XP_001703511.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158280435|gb|EDP06193.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 429
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 100 RMEELIRQFGT-ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
R+ E++++ + L+ I QHKWA+PF PVD DY +V+ PMDFST++ + EA
Sbjct: 84 RLVEIVQKHCSQALKAIMQHKWAFPFNTPVDTSRF--VDYLKVVATPMDFSTVRNRTEAG 141
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL-PKVTEEEKRRE 217
Y++ ++ +DV LVF NA +YN SD H+MA+TL EEK+ +L+ P++ EE +
Sbjct: 142 YYRDPKDWWSDVMLVFSNAKRYNAPGSDCHLMAQTLQEVSEEKYEKLIAPRLAEEAAVTQ 201
Query: 218 EEEAE-----AQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEK 272
EE A+L DA A+ + E+ + E + M C + EEK
Sbjct: 202 REELHLRKRRAELANGQVADAMDAQCGM-LFGLMAELHAAIREAKSMAASLCEPLTLEEK 260
Query: 273 RKLGAALTRLSPEDLGKALEIVA 295
+ L A + L L + VA
Sbjct: 261 QALAATIQGLPTAQLESIVAFVA 283
>gi|396080310|ref|NP_001257500.1| bromodomain-containing protein 2 isoform 2 [Danio rerio]
gi|94732369|emb|CAK04960.1| bromodomain-containing 2 [Danio rerio]
gi|190337777|gb|AAI63905.1| Bromodomain-containing 2a [Danio rerio]
gi|190339055|gb|AAI63902.1| Bromodomain-containing 2a [Danio rerio]
Length = 832
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAW 122
+G S K + +P + Q Q RR K +++ +R TIL+ + K +AW
Sbjct: 351 RGGSGRPIKPPRKDLPDSQNQHQPV-RRGKLSQQ-----LRYCSTILKELLSKKHTAYAW 404
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF +PVDV LGL DYY++I PMD STIK++M+ +EY++ + DVRL+F N KYN
Sbjct: 405 PFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNP 464
Query: 183 ERSDVHVMAKTLLAKFEEKWLQL 205
DV MA+ L FE ++ ++
Sbjct: 465 PDHDVVAMARRLQDVFEFRFAKM 487
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H +AWPF +PVD L L DYY +I +PMD TIKK++E Y++ E D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
+F N YN D+ +MA++L F +K Q +P+V EE
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|396080308|ref|NP_571275.2| bromodomain-containing protein 2 isoform 1 [Danio rerio]
gi|157280793|gb|ABV29329.1| bromodomain-containing protein 2a [Danio rerio]
Length = 836
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAW 122
+G S K + +P + Q Q RR K +++ +R TIL+ + K +AW
Sbjct: 351 RGGSGRPIKPPRKDLPDSQNQHQPV-RRGKLSQQ-----LRYCSTILKELLSKKHTAYAW 404
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF +PVDV LGL DYY++I PMD STIK++M+ +EY++ + DVRL+F N KYN
Sbjct: 405 PFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNP 464
Query: 183 ERSDVHVMAKTLLAKFEEKWLQL 205
DV MA+ L FE ++ ++
Sbjct: 465 PDHDVVAMARRLQDVFEFRFAKM 487
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H +AWPF +PVD L L DYY +I +PMD TIKK++E Y++ E D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
+F N YN D+ +MA++L F +K Q +P+V EE
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|157280791|gb|ABV29328.1| bromodomain-containing protein 2a [Danio rerio]
Length = 838
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAW 122
+G S K + +P + Q Q RR K +++ +R TIL+ + K +AW
Sbjct: 353 RGGSGRPIKPPRKDLPDSQNQHQPV-RRGKLSQQ-----LRYCSTILKELLSKKHTAYAW 406
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF +PVDV LGL DYY++I PMD STIK++M+ +EY++ + DVRL+F N KYN
Sbjct: 407 PFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNP 466
Query: 183 ERSDVHVMAKTLLAKFEEKWLQL 205
DV MA+ L FE ++ ++
Sbjct: 467 PDHDVVAMARRLQDVFEFRFAKM 489
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H +AWPF +PVD L L DYY +I +PMD TIKK++E Y++ E D
Sbjct: 84 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 143
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
+F N YN D+ +MA++L F +K Q +P+V EE
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|24210305|emb|CAD54663.1| bromodomain containing 2 [Danio rerio]
Length = 806
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAW 122
+G S K + +P + Q Q R ++ + +R TIL+ + K +AW
Sbjct: 342 RGGSGRPIKPPRKDLPDSQNQHQPVRR------GKLSQQLRYCSTILKELLSKKHTAYAW 395
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF +PVDV LGL DYY++I PMD STIK++M+ +EY++ + DVRL+F N KYN
Sbjct: 396 PFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNP 455
Query: 183 ERSDVHVMAKTLLAKFEEKWLQL 205
DV MA+ L FE ++ ++
Sbjct: 456 PDHDVVAMARRLQDVFEFRFAKM 478
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H +AWPF +PVD L L DYY +I +PMD TIKK++E Y++ E D
Sbjct: 73 LVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDF 132
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
+F N YN D+ +MA++L F +K Q +P+V EE
Sbjct: 133 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 173
>gi|255536997|ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223549464|gb|EEF50952.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 718
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+++Q T+L + H++ W F +PVDV L + DYY +I PMD TIK + + Y +
Sbjct: 105 VMKQCETLLSRLMSHQYGWVFKEPVDVVKLNIPDYYTIIKHPMDLGTIKSNICSGLYSSP 164
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F+NAM+YN + SDVH+MA TL FE +W + K+ + + ++
Sbjct: 165 LEFLADVRLTFRNAMEYNPKGSDVHIMADTLSKFFEVRWKAIEKKLPKIDTHGLPSKSGP 224
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRL 282
+ D+Q+ + + K R S+ +E+ + V R + +EK+KLG L L
Sbjct: 225 REDLQITEISPIKK--RKISSYQHEI---------VAVPVRRVMTDDEKQKLGKELESL 272
>gi|28278510|gb|AAH45866.1| Brd2a protein [Danio rerio]
Length = 586
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAW 122
+G S K + +P + Q Q RR K +++ +R TIL+ + K +AW
Sbjct: 353 RGGSGRPIKPPRKDLPDSQNQHQPV-RRGKLSQQ-----LRYCSTILKELLSKKHTAYAW 406
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF +PVDV LGL DYY++I PMD STIK++M+ +EY++ + DVRL+F N KYN
Sbjct: 407 PFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHREYRDALQFAADVRLMFSNCYKYNP 466
Query: 183 ERSDVHVMAKTLLAKFEEKWLQL 205
DV MA+ L FE ++ ++
Sbjct: 467 PDHDVVAMARRLQDVFEFRFAKM 489
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++R + +H +AWPF +PVD L L DYY +I +PMD TIKK++E Y++ E D+
Sbjct: 84 LVRMLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDL 143
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
+F N YN D+ +MA++L F +K Q +P+V EE
Sbjct: 144 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|224121914|ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
gi|222859377|gb|EEE96924.1| global transcription factor group [Populus trichocarpa]
Length = 613
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L + H++ W F PVDV + + DY+ +I PMD T+K ++ + EY +
Sbjct: 94 LMKQCETLLNRLMTHQFGWIFNTPVDVVKMNIPDYFTIIKHPMDLGTVKSRIISGEYSSP 153
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL---LP------KVTEEEK 214
DVRL F NAMKYN +D H MA+TL FE +W + +P V
Sbjct: 154 LGFAADVRLTFANAMKYNPPGNDFHFMAETLSKFFEVRWKVIEKKIPVTADVEPVPSRAD 213
Query: 215 RREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRK 274
R E E A ++ + D K + T ++ ++++ ++K + EE++K
Sbjct: 214 VRMEMETTAHIEKETTTDTPPLKKKKITPSD--------NKVKPGPIRKV--MTNEERQK 263
Query: 275 LGAALTRLSPEDLGKALEIVAQ-SNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
L L L E +E + + S Q +E+E+D+DA + L+ L+ + + L
Sbjct: 264 LSMELEALLAELPENIIEFLKEHSGNAGQTGEDEIEIDIDALGDDILFNLRKLLDNYL 321
>gi|198282051|ref|NP_001128282.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
gi|197245764|gb|AAI68574.1| brd2 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S Q S +K + +E R + +K ++ + + + + ++ E ++ IL+ +
Sbjct: 277 SPLQASETKPAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLS 336
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV LGL DYY++I PMD STIKK+M+ +E+K+ +E VRL+F
Sbjct: 337 KKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFKDAQEFAAAVRLMF 396
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN DV MA+ L FE ++ ++
Sbjct: 397 SNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 427
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++++ +H+++WPF QPVD LGL DY+++I +PMD TIKK++E Y + E D
Sbjct: 65 VVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQD 124
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 125 FNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|115530796|emb|CAL49346.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
Length = 529
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S Q S +K + +E R + +K ++ + + + + ++ E ++ IL+ +
Sbjct: 297 SPLQASETKPAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLS 356
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV LGL DYY++I PMD STIKK+M+ +E+K+ +E VRL+F
Sbjct: 357 KKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNREFKDAQEFAAAVRLMF 416
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN DV MA+ L FE ++ ++
Sbjct: 417 SNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 447
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++++ +H+++WPF QPVD LGL DY+++I +PMD TIKK++E Y + E D
Sbjct: 85 VVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRLENNYYWSALECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA++L E+ +LQ + ++ +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQSL----EKMFLQKVAQMPQEEQ 185
>gi|119624070|gb|EAX03665.1| bromodomain containing 2, isoform CRA_c [Homo sapiens]
Length = 552
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 20/232 (8%)
Query: 105 IRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
++ IL+ + K +AWPF +PVD LGL DY+++I PMD ST+K++ME ++Y+
Sbjct: 244 LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYR 303
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEA 221
+ +E DVRL+F N KYN DV MA+ L + + L L + + +R+ E+
Sbjct: 304 DAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQLRAVHEQLAALSQGPISKPKRKREKK 363
Query: 222 EAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTR 281
E + + + D+ E ++ R S +EKR+L + +
Sbjct: 364 EKKKKRKAEKPPPALPTGYDSEEE----------------EESRPMSYDEKRQLSLDINK 407
Query: 282 LSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFFVKDALK 332
L E LG+ + I+ + + EE+E+D + STL L+ +V L+
Sbjct: 408 LPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLR 459
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|391337779|ref|XP_003743242.1| PREDICTED: bromodomain testis-specific protein-like [Metaseiulus
occidentalis]
Length = 802
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + K E+++ K +M E ++ +I++ + K +AWPF VDV
Sbjct: 365 RESGRPIKKPVKDIPESAQHSKVKRGKMTEKLKYCNSIIKELFAKKHSAYAWPFYTAVDV 424
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
+GLGL DYY++I +PMD TIK +ME +EY+N + C DVRLVF N KYN +V M
Sbjct: 425 EGLGLHDYYDIITQPMDLGTIKTKMERREYRNPDDFCNDVRLVFMNCYKYNPADHEVVKM 484
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE K ++
Sbjct: 485 ARKLQDVFEMKLTKM 499
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H +AWPF QPVD L L DY+++I PMD TIKK++E Y + +E D
Sbjct: 79 VMKAVWKHNFAWPFQQPVDTIKLNLPDYFKIIKVPMDLGTIKKRLENCYYYDAQECINDF 138
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
++F N YN DV +MA++L E+ +L L ++ +EE
Sbjct: 139 NVLFSNCYIYNKPGEDVVLMAQSL----EKLFLSKLAEMPQEE 177
>gi|358340347|dbj|GAA29956.2| bromodomain-containing protein 3 [Clonorchis sinensis]
Length = 1466
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 46/290 (15%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYY 139
++K + E S R + ++Q IL I+ +++ F++PVD + +GL DY+
Sbjct: 1096 VKKLKPEYSERHTDKSVHLSAALKQCSNILSEISSYRYKELNHFFIKPVDARSMGLHDYH 1155
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++ KPMD T+K ++++ +Y + DVRL+F N KYN E SDV + K L FE
Sbjct: 1156 NIVKKPMDLHTVKVKLDSGQYHTRSDFAEDVRLIFTNCYKYNGESSDVGKIGKVLSGIFE 1215
Query: 200 ----------EKWLQLLPKVTEEEKR-------------REEEEAEA---QLDMQLAQDA 233
E QL+ +E +R R E + L+ Q +
Sbjct: 1216 DFLSKVPADNEDLDQLIQNSIKEHQRLTVQFQQCNDELQRSTAELSSILNTLNSQAKRAL 1275
Query: 234 AHAKMARDTSNEL----------YEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
H+ + S E+ YE+D +E+ E VQ + +EKR+L + +L
Sbjct: 1276 HHSTVPVPNSTEVSGYPQSIMCGYEID---EEMPERNVQL---MTYDEKRQLSLDINKLP 1329
Query: 284 PEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFFVKDALK 332
E LG+ ++I+ Q + +E+ELD + +TL L+ +VK L+
Sbjct: 1330 GEKLGQVIQIIQQHEPSHRDCNPDEIELDFETLQHTTLRELEQYVKAVLR 1379
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 70 TLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQ 126
+L D ++R I+K +++ R A R+ E ++ IL++I+ ++ F++
Sbjct: 144 SLDDPSRDRR--QIKKPKRDYEERSVAKRLRLSEALKACSNILKDISSQRYRDLNHLFLK 201
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSD 186
PVD + +GL DY++V+ K MD ST+K ++E +Y + E D+RL+F N KYN E SD
Sbjct: 202 PVDAEAMGLHDYHDVVKKAMDLSTVKTKLETGQYHSKYEFADDIRLMFNNCYKYNGEDSD 261
Query: 187 VHVMAKTLLAKFEEKWLQL 205
V + K L A FEE + ++
Sbjct: 262 VAKVGKLLQAIFEESFAKV 280
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ + + K+ WPF + VD + L L DY +++ PMD TIK+++ K Y + E D+
Sbjct: 920 VINRLLKEKYVWPFTRLVDHERLNLPDYPKIVKHPMDLGTIKQRLNLKFYHSSVECFDDL 979
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL 194
+F+N +N D+ MA L
Sbjct: 980 FTMFRNCYIFNKPGDDIVGMAVKL 1003
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 258 EMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQS 316
EM R + +EKR+L + +L E LG+ ++I+ Q + +E+E+D +
Sbjct: 424 EMSENNVRPMTYDEKRQLSIDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQ 483
Query: 317 ESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNNKRKREIC 361
+TL L+ +VK L+ + + + K N+AT + RE C
Sbjct: 484 HTTLRELEKYVKSVLQ-KAKSGSRKYVKKGPNTATPG--KSREEC 525
>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 740
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++ +L+ + H++ W F PVDV L L DY+ +I PMD T+K ++ A EY
Sbjct: 177 LMKDCELLLKRLMSHQYGWVFKTPVDVVKLKLPDYFSIIKHPMDLGTVKSKIAAGEYAGP 236
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN +DVHVMA TL FE +W + K+ RR++ +
Sbjct: 237 IEFADDVRLTFSNAMIYNPRGNDVHVMADTLSKYFELRWKAIEKKLP----RRDDVPFPS 292
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKT-STEEKRKLGAALTRL 282
+ D + + ++ + + +++ +K S +EK LG L L
Sbjct: 293 KPDTYVIKTTRPMPPSKKRK-------ISTLPCQPVVMPPAKKVMSDQEKHNLGIELESL 345
Query: 283 SPEDLGKALEIVAQ-SNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
E ++ + + + G + +E+E+D+D + TL+ L+ + D L
Sbjct: 346 LGEMPMHIIDFLKENCSNGEECGEDELEIDIDDLKDDTLFALRKLLDDFL 395
>gi|412993064|emb|CCO16597.1| bromodomain containing 2 [Bathycoccus prasinos]
Length = 1076
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME-AKEYKNVR 164
RQ +R + H W PF PVD LGL +Y+ +I PMD TIKK +E +Y+ +
Sbjct: 505 RQCLAAVRQVMSHDWGGPFRMPVDAVALGLANYHTIITNPMDLGTIKKFIEDGGKYELAK 564
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK---------R 215
E+ DV L F NAMK+N E +DVHVMAKTLLA + K+ ++ + E E+
Sbjct: 565 EVHEDVELTFNNAMKFNAEGTDVHVMAKTLLALWHTKYEGIVAREKEVEEGLLLDRDACI 624
Query: 216 REEEEAEAQLDMQLAQDAAHAKM--ARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR 273
+ A ++L+ Q Q M N+L ++ EL+ +++ K + +EK
Sbjct: 625 AKAAAAASKLEYQTIQSECQTIMQALGLAQNQLSDL-----ELKSIVLFK--PMTADEKS 677
Query: 274 KLGAALTRLSPEDLGKALEIVAQSNT 299
LG L L+ ED KA +I++ T
Sbjct: 678 ALGDILKSLTAEDSEKARQILSDGPT 703
>gi|302834497|ref|XP_002948811.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
gi|300266002|gb|EFJ50191.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
Length = 767
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 120/266 (45%), Gaps = 20/266 (7%)
Query: 98 EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA 157
+K+++++ R G +L + + K A F++PVD G+ DY++ I PMD TIK ++
Sbjct: 91 DKKIQDIWRMCGAVLDFLMKKKNAIVFLRPVDPVKDGVPDYFKFICHPMDLGTIKTRLRE 150
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
++Y + RE DVRLV++N YN + V +M L +E KW +L ++R
Sbjct: 151 RKYSDPREFAADVRLVWRNCATYNAVGTPVRIMGDQLSEDWERKWAEL------NVEQRW 204
Query: 218 EEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGA 277
+ + + D A AR + V V D R +T EKRKL
Sbjct: 205 DALVATRDPQTIPLDQRIASSARQLLQRVNSVHVLPD------ADPSRTMTTVEKRKLSI 258
Query: 278 ALTRLSPEDLGKALEIVAQSNTGFQA-TAEEVELDMDAQSESTLWRLKFFVKDALKSQGN 336
AL+ L L L I+A++ EE+ELD+D TLWRL+ + N
Sbjct: 259 ALSELQGNQLADVLNIIAENLKDINPDDEEEIELDVDQLDNQTLWRLREYCD-------N 311
Query: 337 NNNNDNNKNNNNSATNNNKRKREICD 362
NN + K S R + D
Sbjct: 312 ANNKHSAKPTAPSKAGGGGASRSVHD 337
>gi|348513555|ref|XP_003444307.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 810
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 96 AAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
A + R+ E +R IL+ + + +AWPF PVD LGL DY+++I PMD STIK
Sbjct: 256 AKKVRLSEQLRCCNDILKELLSKRHSAYAWPFYVPVDAAALGLHDYHDIITHPMDLSTIK 315
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
K+M+ +EY N +E DVRL+F N KYN ++V MA+ L FE ++L+L
Sbjct: 316 KKMDQREYGNAKEFAADVRLMFSNCYKYNPPSNEVVHMARKLQEVFEARYLKL 368
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H+++WPF QPVD L L DYY +I PMD TIKK+++ Y + D
Sbjct: 38 VVLQALWRHQYSWPFHQPVDAVALCLPDYYTIITNPMDLGTIKKRLKNSYYWQAVDCIDD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ MAKTL E+ +LQ L K+ +EE
Sbjct: 98 FNTMFTNCYVYNQPGDDIVFMAKTL----EKLFLQKLSKMPQEE 137
>gi|327290160|ref|XP_003229792.1| PREDICTED: bromodomain-containing protein 2-like [Anolis
carolinensis]
Length = 794
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 48 NEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQ 107
E + A K + +E R + RK ++ + + + ++ E ++
Sbjct: 299 GESSPLGVGAPSPLAEGGKAAKIPARRESGRPIKPPRKDLPDSQQHQTSKRGKLSEQLKY 358
Query: 108 FGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
IL+ + K +AWPF +PVD LGL DY+E+I PMD STIK++ME ++Y++ +
Sbjct: 359 CNGILKELVSKKHAAYAWPFYKPVDASALGLHDYHEIIKYPMDLSTIKRKMENRDYRDAQ 418
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
E +DVRL+F N KYN DV MA+ L FE + ++
Sbjct: 419 EFASDVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 459
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y + E D
Sbjct: 82 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWSSAECMQD 141
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+TL F +K Q+
Sbjct: 142 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQM 177
>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 739
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 122/232 (52%), Gaps = 18/232 (7%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L+ + H++ F +PVD+ + DY+ +I PMD T+K ++ + EY ++
Sbjct: 170 LMKQCETLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCEYTSL 229
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+ DVRL F NAM YN +DVHVMA+TL FE +W + + ++ E +
Sbjct: 230 MDFAADVRLTFSNAMSYNPPGNDVHVMAETLSKYFETRWKPIEKILAIDDVPSEPSKPTT 289
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLG----AAL 279
++ D K + T N +V + ++ ++ + EEK+KL A++
Sbjct: 290 CIEKSEIVDPP-VKKKKITPN---GTNVKPEPIKRIM-------TGEEKQKLSMELDASV 338
Query: 280 TRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
L PE++ L+ QS Q +E+E+D+DA S+ TL++L+ + D +
Sbjct: 339 VEL-PENIIDFLK--EQSYNASQINDDEIEIDIDALSDDTLFKLRKLLDDFM 387
>gi|218199690|gb|EEC82117.1| hypothetical protein OsI_26141 [Oryza sativa Indica Group]
Length = 484
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ G+IL+ + HK W F PVD G+ DY++VI PMD T+K+++ +K+Y N E
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAMKYN +DVH +A L F+ +W
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDSEW 159
>gi|444732332|gb|ELW72633.1| Bromodomain testis-specific protein [Tupaia chinensis]
Length = 556
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 30/251 (11%)
Query: 103 ELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+ +E
Sbjct: 225 EQLRHCNEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQE 284
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR---- 215
YK+ E DVRL+F N KYN +V MA+ L K + LQ+L +V + +
Sbjct: 285 YKDAYEFAADVRLMFMNCYKYNPPDHEVVSMARMLQLKAVHQQLQVLSQVPFRKLKKKNE 344
Query: 216 -------------REEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQ 262
R++ + M+L ++ + + +++ + D + M
Sbjct: 345 KSKREKKKAKVTNRDDNPRKKAKQMKL-KEKPQSNQPKKRKQQVFALKSDEDNAKPM--- 400
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
+ +EKRKL + +L + LG+ + I+ + + +E+E+D + STL
Sbjct: 401 -----NYDEKRKLSLDINKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFETLKASTLR 455
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 456 ELEKYVAACLR 466
>gi|405967643|gb|EKC32780.1| Bromodomain testis-specific protein [Crassostrea gigas]
Length = 1173
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
+ + +AWPF +PVD LGL DY+++I KPMD TIKK+ME++EYK + DVRL+F
Sbjct: 361 VGEKAYAWPFYKPVDADVLGLHDYHDIIKKPMDLGTIKKKMESREYKTAAQFAEDVRLIF 420
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
N +YN SDV VMA+ L FE K+ +P+ TE
Sbjct: 421 TNCYRYNPTDSDVVVMARKLQDVFEVKY-ATMPEETE 456
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ + +H++AWPF +PVD+K L L DYY++I +PMD TIK+++E Y + E D
Sbjct: 84 TVLKAVWRHQYAWPFHKPVDIKLLNLPDYYDIIKQPMDLGTIKERLETNFYYSATECIQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+F N YN+ + D+ +MA+ L F +K Q+ P
Sbjct: 144 FNQMFTNCYIYNNPKEDIVLMAQVLEKLFLQKVAQMPP 181
>gi|354487577|ref|XP_003505948.1| PREDICTED: bromodomain-containing protein 2-like [Cricetulus
griseus]
gi|344253000|gb|EGW09104.1| Bromodomain-containing protein 2 [Cricetulus griseus]
Length = 752
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 78/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV VMA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVVMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|242065686|ref|XP_002454132.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
gi|241933963|gb|EES07108.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
Length = 711
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
+KK + +G + + K R +P+ + + E A K+ E IL+ +
Sbjct: 132 AKKPQKSQRGVTNVIRGAKGRFLPTKPRPEPTTVLSEAAVFKQCE-------AILKKLMT 184
Query: 118 HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNA 177
K++ F PVDV L + DY++++ PMD T++K++E+ Y + + DVRL F NA
Sbjct: 185 QKYSHIFNVPVDVDKLQIPDYFDIVKTPMDLGTVQKKLESGSYTSPSDFAADVRLTFNNA 244
Query: 178 MKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAK 237
M YN + VH MA L FE +W + E++ A A + + D A +K
Sbjct: 245 MAYNPKGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADSK 293
Query: 238 MARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEIV 294
R + + DV + +R+ +K + T+ EE+ G +L +S P + + L+
Sbjct: 294 --RRKTPPVDRSDVSTEGVRQTEPEKPKMTA-EEREAFGNSLASISDELPPHIFELLQQC 350
Query: 295 AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNKN 345
SNT E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 351 IDSNTDMPGDG-EIEIDIQAVSDDMLFELKKHVDKYLQEREQSQQVKSEPSENEAVNVSG 409
Query: 346 NNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 410 LSHSSTNPCKGGEPI 424
>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
impatiens]
Length = 1486
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 77 ERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGL 133
+ ++P I Q+ +++++ E ++ IL+ + K +AWPF +PVD + L
Sbjct: 384 QANMPLIGAMAQQPQHTTGKSKEKLSEALKSCNEILKELFSKKHSGYAWPFYKPVDAELL 443
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
GL DY+++I KPMD T+K +M+ +EYK +E +DVRL+F N KYN DV MA+
Sbjct: 444 GLHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARK 503
Query: 194 LLAKFEEKWLQL 205
L FE ++ ++
Sbjct: 504 LQDVFEMRYAKI 515
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN DV VMA+ L +A+ ++ ++L P V + K ++
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELEPPVPKGPKGKK 191
>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
niloticus]
Length = 1432
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFST 150
E KR E+L R ++R + K +AWPF +PVD K LGL DY+E+I PMD ST
Sbjct: 425 ESGTPKRQEQL-RWCARLVREMLSKKHVAYAWPFYKPVDAKALGLHDYHEIIKHPMDLST 483
Query: 151 IKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
IKK+++ ++Y++ +E DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 484 IKKKLDNRQYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEMRFAKM 538
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H +AWPF PVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 89 VLKTLWKHNFAWPFQAPVDAIKLNLPDYYKIIKSPMDMGTIKKRLENNYYWNAQECIQDF 148
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 149 NTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKITEMPQEE 187
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 258 EMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQS 316
+M +C+ S EEKR+L + +L + LG+ + I+ + + +E+E+D +
Sbjct: 697 DMSADRCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLK 756
Query: 317 ESTLWRLKFFVKDALK 332
STL L+ +V L+
Sbjct: 757 PSTLRELEKYVSSCLR 772
>gi|324500947|gb|ADY40429.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 976
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+ WPF++PVDV+GL L DYY+++ +PMD TI+++MEAK+Y + E+ D+ LV +N K
Sbjct: 191 FTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQYASPEEMREDLLLVCENCFK 250
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN VH KTL FEEKW Q+
Sbjct: 251 YNPPSDPVHQHGKTLQKYFEEKWRQM 276
>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
rotundata]
Length = 1489
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 77 ERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGL 133
+ ++P I Q+ +++++ E ++ IL+ + K +AWPF +PVD + L
Sbjct: 384 QANMPLIGAMAQQPQHTTGKSKEKLSEALKSCNEILKELFSKKHSGYAWPFYKPVDAELL 443
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
GL DY+++I KPMD T+K +M+ +EYK +E +DVRL+F N KYN DV MA+
Sbjct: 444 GLHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARK 503
Query: 194 LLAKFEEKWLQL 205
L FE ++ ++
Sbjct: 504 LQDVFEMRYAKI 515
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+F N YN DV VMA+ L +A+ ++ ++L P V + K ++ A
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELEPPVPKGPKGKKAGRVGA 197
Query: 224 QL 225
+
Sbjct: 198 PV 199
>gi|413937644|gb|AFW72195.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 494
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 35/316 (11%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K Q S G++ ++ K R +P+ + + E AA K+ E IL+ +
Sbjct: 129 AKKPQKSQRGGTNVIRGA-KGRFLPTKPRPETSTVLSEAAAFKQCE-------AILKKLM 180
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
K++ F PVD+ L + DY++++ PMD T+KK++E+ Y + + DVRL F N
Sbjct: 181 TQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNN 240
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN VH MA L FE +W + E++ A A + + D A +
Sbjct: 241 AMAYNPRGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADS 289
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEI 293
K R + + DV ++ R+ + K + EE+ G L +S P + + L+
Sbjct: 290 K--RRKTPPVDRSDVSMECARQTEPET-PKMTAEEREAFGNCLASISDELPPHIFELLQQ 346
Query: 294 VAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNK 344
SN E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 347 CIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVS 405
Query: 345 NNNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 406 GLSHSSTNPCKGGEPI 421
>gi|449433591|ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
gi|449523269|ref|XP_004168646.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
Length = 569
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 65 SKGSSTLKDKEKERH-VPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWP 123
SK S T+ DK + + S R+++Q+ R +Q +IL+ + H++ W
Sbjct: 77 SKSSITIADKRRATEDIESPREKKQKLDR----------GTTQQCSSILKTLMTHRFGWV 126
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F QPVD L + DY+ +I PMD T+K ++E Y+ E D+RL F NAM YN
Sbjct: 127 FNQPVDPVALKIPDYFSIITDPMDLGTVKSKLERNLYQASEEFAADIRLTFSNAMLYNPS 186
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPK 208
+ VH MAK LL FE+KW +LPK
Sbjct: 187 GNHVHKMAKELLENFEKKW--ILPK 209
>gi|115472285|ref|NP_001059741.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|33146482|dbj|BAC79591.1| putative RING3 protein [Oryza sativa Japonica Group]
gi|113611277|dbj|BAF21655.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|215717115|dbj|BAG95478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ G+IL+ + HK W F PVD G+ DY++VI PMD T+K+++ +K+Y N E
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 122
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAMKYN +DVH +A L F+ +W
Sbjct: 123 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEW 159
>gi|410903440|ref|XP_003965201.1| PREDICTED: bromodomain-containing protein 2-like [Takifugu
rubripes]
Length = 546
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 47/316 (14%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
S GS S S + K V + K+ E K E + E ++ IL+ +
Sbjct: 198 GGSPTAGSGSSPSQNQRSLRKSGRVNNQPKKTVEEKEPPKP-EHGLSERLKFCNVILKEM 256
Query: 116 TQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
K +AWPF +PVD L L+DY+++I PMD ST+K++++ EY N DV+L
Sbjct: 257 LSKKHAAYAWPFYEPVDAVALQLNDYHDIIKHPMDLSTVKRKLDRGEYPNADSFAADVQL 316
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQD 232
+F N KYN +V AK L FE+ + K+ +E + + A L ++
Sbjct: 317 IFSNCYKYNPSHLEVVAHAKKLQGVFEKSFA----KIPDEPTGTGQAQTAAFGKSDLTEE 372
Query: 233 AAHAKMARDTSNELYEVDVHLDELREMLV------------------------------- 261
A ++A + ++ V HL + E+ V
Sbjct: 373 GA-TRLA-ELQEQVKAVPDHLAAISEVPVNKRKRKDDESKTDRQTRGSPTSDPGSPCKLK 430
Query: 262 -----QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQAT-AEEVELDMDAQ 315
KC + EEK +L + RL + LG+ ++I+ T +E+E+D +
Sbjct: 431 TWDPDNKCLPLTYEEKHQLSLDINRLPGKKLGRVVQIIQTLEPSMCETNPDEIEIDFEVL 490
Query: 316 SESTLWRLKFFVKDAL 331
STL RL+ +VK L
Sbjct: 491 KPSTLRRLQQYVKKCL 506
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
+R +L +++++ +H +AWPF +PVD GLGL DY+++I PMD TIKK++E
Sbjct: 27 RRTNQLQYMQNIVVKSLWRHHYAWPFYEPVDAVGLGLADYHKIITSPMDLGTIKKRLENN 86
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTE 211
Y E D +F N YN D+ +MA TL +A+ ++ +++LP V +
Sbjct: 87 YYWTASECLQDFNTMFTNCYIYNKPTDDIVLMALTLEKIFLQKVAQMPQEEVEVLPYVAK 146
Query: 212 EEKRR 216
+ ++
Sbjct: 147 GKGKK 151
>gi|222637108|gb|EEE67240.1| hypothetical protein OsJ_24385 [Oryza sativa Japonica Group]
Length = 536
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ G+IL+ + HK W F PVD G+ DY++VI PMD T+K+++ +K+Y N E
Sbjct: 115 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYE 174
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAMKYN +DVH +A L F+ +W
Sbjct: 175 FAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEW 211
>gi|387014800|gb|AFJ49519.1| bromodomain-containing protein 2-like [Crotalus adamanteus]
Length = 715
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + RK ++ + + + ++ E ++ IL+ + + +AWPF +PVD
Sbjct: 324 RESGRPIKPPRKDLPDSQQHQTSKRGKLSEQLKYCNGILKELVSKRHAAYAWPFYKPVDA 383
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD S+IK++ME +EY++ +E +DVRL+F N KYN DV M
Sbjct: 384 SALGLHDYHEIIKHPMDLSSIKRKMENREYRDAQEFASDVRLMFSNCYKYNPPDHDVVAM 443
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 444 ARKLQDVFEFSYAKM 458
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y + E D
Sbjct: 86 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENGYYWSSGECMQD 145
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + ++ +EE+
Sbjct: 146 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVAQMPQEEQ 186
>gi|413937645|gb|AFW72196.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 488
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 35/316 (11%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K Q S G++ ++ K R +P+ + + E AA K+ E IL+ +
Sbjct: 129 AKKPQKSQRGGTNVIRGA-KGRFLPTKPRPETSTVLSEAAAFKQCE-------AILKKLM 180
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
K++ F PVD+ L + DY++++ PMD T+KK++E+ Y + + DVRL F N
Sbjct: 181 TQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNN 240
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN VH MA L FE +W + E++ A A + + D A +
Sbjct: 241 AMAYNPRGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADS 289
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEI 293
K R + + DV ++ R+ + + T+ EE+ G L +S P + + L+
Sbjct: 290 K--RRKTPPVDRSDVSMECARQTEPETPKMTA-EEREAFGNCLASISDELPPHIFELLQQ 346
Query: 294 VAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNK 344
SN E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 347 CIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVS 405
Query: 345 NNNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 406 GLSHSSTNPCKGGEPI 421
>gi|224060209|ref|XP_002300086.1| global transcription factor group [Populus trichocarpa]
gi|222847344|gb|EEE84891.1| global transcription factor group [Populus trichocarpa]
Length = 630
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 61/99 (61%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q T+L+ + H++ W F PVD+ L + DYY VI PMD TIK ++ + Y +
Sbjct: 115 LMKQCETLLKRLMSHQYGWVFNSPVDIVKLNIPDYYTVIKNPMDLGTIKSKISSGAYSSP 174
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
E DVRL FKNAM YN + SD ++MA TL FE +W
Sbjct: 175 LEFMADVRLTFKNAMVYNPQGSDAYIMADTLNKFFEMRW 213
>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
Length = 1514
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 77/127 (60%), Gaps = 6/127 (4%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDY 138
++ +Q Q A + K +++ E ++ IL+ + K +AWPF +PVD + LGL DY
Sbjct: 382 AMAQQPQHAGGKSK---EKLSEPLKCCNDILKELFSKKHSGYAWPFYKPVDAELLGLHDY 438
Query: 139 YEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKF 198
+E+I KPMD T+K +M+ +EYK +E +DVRL+F N KYN DV MA+ L F
Sbjct: 439 HEIIKKPMDLGTVKSKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIF 498
Query: 199 EEKWLQL 205
E ++ ++
Sbjct: 499 EMRYAKI 505
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I++PMD TIKK++E Y + +E D
Sbjct: 70 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIERPMDLGTIKKRLENTYYWSGKECIQDF 129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+ L F K Q+
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 164
>gi|324500843|gb|ADY40384.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 1194
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+ WPF++PVDV+GL L DYY+++ +PMD TI+++MEAK+Y + E+ D+ LV +N K
Sbjct: 393 FTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQYASPEEMREDLLLVCENCFK 452
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN VH KTL FEEKW Q+
Sbjct: 453 YNPPSDPVHQHGKTLQKYFEEKWRQM 478
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ +HK AWPF +PVD L L DY++VI +PMD +TI+K++ Y + ++ D
Sbjct: 126 VLKPAMRHKHAWPFTKPVDAVRLSLPDYHKVIKRPMDMNTIEKRLRNVYYYSAKDCMQDF 185
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+F N K+N DV +M K + + EK ++LLP
Sbjct: 186 EAIFANCYKFNQNEDDVSLMCKNIENLYREK-IKLLP 221
>gi|219888341|gb|ACL54545.1| unknown [Zea mays]
gi|413937646|gb|AFW72197.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 538
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 35/316 (11%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K Q S G++ ++ K R +P+ + + E AA K+ E IL+ +
Sbjct: 129 AKKPQKSQRGGTNVIRGA-KGRFLPTKPRPETSTVLSEAAAFKQCE-------AILKKLM 180
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
K++ F PVD+ L + DY++++ PMD T+KK++E+ Y + + DVRL F N
Sbjct: 181 TQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNN 240
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN VH MA L FE +W + E++ A A + + D A +
Sbjct: 241 AMAYNPRGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADS 289
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEI 293
K R + + DV ++ R+ + + T+ EE+ G L +S P + + L+
Sbjct: 290 K--RRKTPPVDRSDVSMECARQTEPETPKMTA-EEREAFGNCLASISDELPPHIFELLQQ 346
Query: 294 VAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNK 344
SN E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 347 CIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVS 405
Query: 345 NNNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 406 GLSHSSTNPCKGGEPI 421
>gi|413937648|gb|AFW72199.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 728
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 35/316 (11%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K Q S G++ ++ K R +P+ + + E AA K+ E IL+ +
Sbjct: 145 AKKPQKSQRGGTNVIRGA-KGRFLPTKPRPETSTVLSEAAAFKQCE-------AILKKLM 196
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
K++ F PVD+ L + DY++++ PMD T+KK++E+ Y + + DVRL F N
Sbjct: 197 TQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNN 256
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN VH MA L FE +W + E++ A A + + D A +
Sbjct: 257 AMAYNPRGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADS 305
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEI 293
K R + + DV ++ R+ + + T+ EE+ G L +S P + + L+
Sbjct: 306 K--RRKTPPVDRSDVSMECARQTEPETPKMTA-EEREAFGNCLASISDELPPHIFELLQQ 362
Query: 294 VAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNK 344
SN E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 363 CIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVS 421
Query: 345 NNNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 422 GLSHSSTNPCKGGEPI 437
>gi|42568797|ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName: Full=Transcription factor GTE7; AltName:
Full=Bromodomain-containing protein GTE7; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis thaliana]
gi|110742049|dbj|BAE98957.1| hypothetical protein [Arabidopsis thaliana]
gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis thaliana]
gi|332010696|gb|AED98079.1| global transcription factor group E7 [Arabidopsis thaliana]
Length = 590
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%)
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+EK + ++ IL + +HKWAW F PVDV GLGL DY++V+ KPMD T+K ++
Sbjct: 162 SEKLLAGMLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLD 221
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
Y + + TDVRL F NAM YN + DV+ MA LL F+
Sbjct: 222 KGFYVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 264
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEK KLG L L PE LG+ L+I+ + N +E+ELD++A TLW L
Sbjct: 402 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 461
Query: 325 FFV 327
FV
Sbjct: 462 RFV 464
>gi|330414421|gb|AEC13624.1| bromodomain containing protein 2 [Ginglymostoma cirratum]
gi|339895692|dbj|BAK52515.1| bromodomain containing 2 [Ginglymostoma cirratum]
Length = 783
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Query: 65 SKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WA 121
SK + +E R + +K ++ + + + + ++ E ++ IL+ + K +A
Sbjct: 317 SKAAKIPVRRESGRPIKPPKKDLPDSQQHQSSKKGKLSEQLKYCNGILKELLSKKHAAYA 376
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
WPF +PVD K LGL DY+++I PMD STIK++M+ +EY++ +E DVRL+F N KYN
Sbjct: 377 WPFYKPVDAKALGLHDYHDIIKHPMDLSTIKRKMDEREYQDAQEFAADVRLMFSNCYKYN 436
Query: 182 DERSDVHVMAKTLLAKFEEKWLQL 205
DV MA+ L FE ++ ++
Sbjct: 437 PPDHDVVAMARKLQDVFEFRFAKM 460
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I +PMD TIKK++E Y + E D
Sbjct: 95 VLMKALWKHQFAWPFYQPVDAVKLSLPDYHKIIKQPMDMGTIKKRLENNYYWSASECMQD 154
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+TL F +K Q+
Sbjct: 155 FNTMFTNCYIYNKPTDDIVLMAQTLEKLFLQKVAQM 190
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 264 CRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWR 322
CR + +EKR+L + +L + LG+ + I+ + + +E+E+D + STL
Sbjct: 621 CRPMTYDEKRQLSLDINKLPGDKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRE 680
Query: 323 LKFFVKDALK 332
L+ +V L+
Sbjct: 681 LERYVMSCLR 690
>gi|8978291|dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
Length = 643
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 67/115 (58%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDK 144
K+ + + +EK + ++ IL + +HKWAW F PVDV GLGL DY++V+ K
Sbjct: 205 KRSNQFGPSDPESEKLLAGMLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKK 264
Query: 145 PMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
PMD T+K ++ Y + + TDVRL F NAM YN + DV+ MA LL F+
Sbjct: 265 PMDLGTVKLNLDKGFYVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 319
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEK KLG L L PE LG+ L+I+ + N +E+ELD++A TLW L
Sbjct: 457 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 516
Query: 325 FFV 327
FV
Sbjct: 517 RFV 519
>gi|395832116|ref|XP_003789122.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 680
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 215 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 269
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 270 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 329
Query: 202 WLQL 205
+ ++
Sbjct: 330 YAKM 333
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIK+++E Y E D +F N YN D+ +MA+TL E+ +LQ
Sbjct: 1 MDMGTIKRRLENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQK 56
Query: 206 LPKVTEEEK 214
+ + +EE+
Sbjct: 57 VASMPQEEQ 65
>gi|441594234|ref|XP_004092963.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Nomascus leucogenys]
Length = 682
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 215 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 269
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 270 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 329
Query: 202 WLQL 205
+ ++
Sbjct: 330 YAKM 333
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIK+++E Y E D +F N YN D+ +MA+TL E+ +LQ
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQK 56
Query: 206 LPKVTEEEK 214
+ + +EE+
Sbjct: 57 VASMPQEEQ 65
>gi|297850172|ref|XP_002892967.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
gi|297338809|gb|EFH69226.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
AEK ++ + ++L + +HK AW F PVD +GLGL DY+ ++ +PMD T+K ++
Sbjct: 124 GAEKGTVQIFKNCNSLLTKLMKHKCAWVFHVPVDAEGLGLHDYHNIVKEPMDLGTVKTKL 183
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
YK+ + DVRL F NA+ YN DVH A+ LL FE+KW+ +
Sbjct: 184 GKNLYKSPLDFAEDVRLTFNNAILYNPVGHDVHRFAELLLNMFEDKWVSI 233
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEKR+L L L + L ++I+ +SN +E+ELD+D+ +TLW L
Sbjct: 323 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQQDDEIELDIDSLDINTLWELY 382
Query: 325 FFV 327
FV
Sbjct: 383 RFV 385
>gi|403261526|ref|XP_003923169.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 215 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 269
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 270 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 329
Query: 202 WLQL 205
+ ++
Sbjct: 330 YAKM 333
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIK+++E Y E D +F N YN D+ +MA+TL E+ +LQ
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQK 56
Query: 206 LPKVTEEEK 214
+ + +EE+
Sbjct: 57 VASMPQEEQ 65
>gi|348505480|ref|XP_003440289.1| PREDICTED: bromodomain-containing protein 3-like [Oreochromis
niloticus]
Length = 513
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 57/370 (15%)
Query: 11 FTAVHAGNPESDVAEVESFTLRVDDIF-QKVDKLEERVNEIEQFYLNASKKQGSNSKGSS 69
FT + N +D ++ L ++ I+ QKV ++ + EI +A+K +G K SS
Sbjct: 103 FTNCYIYNKPTD--DIVLMALALEKIYLQKVAQMPQSEVEIVP---HAAKGKG---KKSS 154
Query: 70 TLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQ 126
T + ++K + +E S ++ + E ++ IL+ + K +AWPF +
Sbjct: 155 TPESRKKRESSSRAKSDFEEESSQQNTEPCGLSEQLKYCNHILKEMLSKKHSAYAWPFYK 214
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSD 186
PVD + L L DY+++I PMD ST+KK+M+A EY++ + DVRL+F N KYN D
Sbjct: 215 PVDAEALQLHDYHDIIKYPMDLSTVKKKMDAGEYQDAQAFAADVRLIFSNCYKYNPAHHD 274
Query: 187 VHVMAKTLLAKFEEKWLQLL----------------PKVTEEEKRR----EEEEAEAQLD 226
V + A+ L FE+++ ++ P+ EE R +E+ QL
Sbjct: 275 VVIKARKLQGIFEQRFAKMPDEHVEVTSQAGGSLEKPESAEERTTRLAELQEQVGADQLK 334
Query: 227 MQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTST----------------- 269
Q AA ++ + E D + + + V R TS
Sbjct: 335 AVHGQLAALSEAPVSKPKKKKENDKKDNSRQNVGVMNSRCTSNSCARYSWKGSNEWESED 394
Query: 270 -------EEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQAT-AEEVELDMDAQSESTLW 321
+EK +L + RL LG + I+ T +E+E+D + STL
Sbjct: 395 ESLPMTYDEKHQLSLDINRLPGMKLGHVVHIIQSREPSVCNTNPDEIEIDFETLKPSTLR 454
Query: 322 RLKFFVKDAL 331
L+ +VK L
Sbjct: 455 ALEQYVKSCL 464
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
+R +L +++++ +H++AWPF QPVD LGL DY+++I PMD TIKK++E
Sbjct: 28 RRTNQLQYMQNIVIKSLWRHQFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENN 87
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKV-- 209
Y + E D +F N YN D+ +MA L +A+ + ++++P
Sbjct: 88 YYWSASECLQDFNTMFTNCYIYNKPTDDIVLMALALEKIYLQKVAQMPQSEVEIVPHAAK 147
Query: 210 -------TEEEKRREEEEAEAQLDMQ 228
T E +++ E + A+ D +
Sbjct: 148 GKGKKSSTPESRKKRESSSRAKSDFE 173
>gi|410958888|ref|XP_003986045.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Felis catus]
Length = 684
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 215 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 269
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 270 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 329
Query: 202 WLQL 205
+ ++
Sbjct: 330 YAKM 333
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIK+++E Y E D +F N YN D+ +MA+TL E+ +LQ
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQK 56
Query: 206 LPKVTEEEK 214
+ + +EE+
Sbjct: 57 VASMPQEEQ 65
>gi|426352679|ref|XP_004043837.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Gorilla
gorilla gorilla]
gi|52545711|emb|CAH56208.1| hypothetical protein [Homo sapiens]
gi|119624067|gb|EAX03662.1| bromodomain containing 2, isoform CRA_a [Homo sapiens]
Length = 681
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 215 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 269
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 270 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 329
Query: 202 WLQL 205
+ ++
Sbjct: 330 YAKM 333
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIK+++E Y E D +F N YN D+ +MA+TL E+ +LQ
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQK 56
Query: 206 LPKVTEEEK 214
+ + +EE+
Sbjct: 57 VASMPQEEQ 65
>gi|297661253|ref|XP_002809177.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Pongo
abelii]
Length = 681
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 215 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 269
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 270 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 329
Query: 202 WLQL 205
+ ++
Sbjct: 330 YAKM 333
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIK+++E Y E D +F N YN D+ +MA+TL E+ +LQ
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQK 56
Query: 206 LPKVTEEEK 214
+ + +EE+
Sbjct: 57 VASMPQEEQ 65
>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
Length = 1492
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Query: 77 ERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGL 133
+ ++P + Q+ +++++ E ++ IL+ + K +AWPF +PVD + L
Sbjct: 384 QPNMPLMGAMAQQPQHTTGKSKEKLSEALKSCNEILKELFSKKHSGYAWPFYKPVDAELL 443
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
GL DY+++I KPMD T+K +M+ +EYK +E +DVRL+F N KYN DV MA+
Sbjct: 444 GLHDYHDIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARK 503
Query: 194 LLAKFEEKWLQL 205
L FE ++ ++
Sbjct: 504 LQDVFEMRYAKI 515
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+ L F K Q+
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|332823728|ref|XP_001167922.2| PREDICTED: bromodomain-containing protein 2 isoform 7 [Pan
troglodytes]
Length = 680
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 215 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 269
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 270 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 329
Query: 202 WLQL 205
+ ++
Sbjct: 330 YAKM 333
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIK+++E Y E D +F N YN D+ +MA+TL E+ +LQ
Sbjct: 1 MDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQK 56
Query: 206 LPKVTEEEK 214
+ + +EE+
Sbjct: 57 VASMPQEEQ 65
>gi|355561582|gb|EHH18214.1| hypothetical protein EGK_14770 [Macaca mulatta]
Length = 862
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 395 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 449
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 450 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 509
Query: 202 WLQL 205
+ ++
Sbjct: 510 YAKM 513
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E E D
Sbjct: 145 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENSYCWAASECMED 204
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+ +F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 205 LNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 245
>gi|306922427|ref|NP_001105214.2| LOC542112 [Zea mays]
Length = 696
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 35/316 (11%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K Q S G++ ++ K R +P+ + + E AA K+ E IL+ +
Sbjct: 129 AKKPQKSQRGGTNVIRGA-KGRFLPTKPRPETSTVLSEAAAFKQCE-------AILKKLM 180
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
K++ F PVD+ L + DY++++ PMD T+KK++E+ Y + + DVRL F N
Sbjct: 181 TQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNN 240
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN VH MA L FE +W + E++ A A + + D A +
Sbjct: 241 AMAYNPRGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADS 289
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEI 293
K R + + DV ++ R+ + + T+ EE+ G L +S P + + L+
Sbjct: 290 K--RRKTPPVDRSDVSMECARQTEPETPKMTA-EEREAFGNCLASISDELPPHIFELLQQ 346
Query: 294 VAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNK 344
SN E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 347 CIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVS 405
Query: 345 NNNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 406 GLSHSSTNPCKGGEPI 421
>gi|29569106|gb|AAO84020.1| global transcription factor group E [Zea mays]
Length = 696
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 35/316 (11%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K Q S G++ ++ K R +P+ + + E AA K+ E IL+ +
Sbjct: 129 AKKPQKSQRGGTNVIRGA-KGRFLPTKPRPETSTVLSEAAAFKQCE-------AILKKLM 180
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
K++ F PVD+ L + DY++++ PMD T+KK++E+ Y + + DVRL F N
Sbjct: 181 TQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNN 240
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN VH MA L FE +W + E++ A A + + D A +
Sbjct: 241 AMAYNPRGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADS 289
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEI 293
K R + + DV ++ R+ + + T+ EE+ G L +S P + + L+
Sbjct: 290 K--RRKTPPVDRSDVSMECARQTEPETPKMTA-EEREAFGNCLASISDELPPHIFELLQQ 346
Query: 294 VAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNK 344
SN E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 347 CIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVS 405
Query: 345 NNNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 406 GLSHSSTNPCKGGEPI 421
>gi|356560519|ref|XP_003548539.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 744
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++ +L+ + H++AW F PVDV L L DY+ +I +PMD T+K ++ A EY
Sbjct: 180 LMKDCELLLKRLMSHQYAWVFKTPVDVVKLNLPDYFTIIKRPMDLGTVKSKLAAGEYAGP 239
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
E DV+L F NAM YN +DVH+MA TL FE +W
Sbjct: 240 LEFADDVKLTFSNAMNYNPSGNDVHLMADTLNKYFELRW 278
>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
impatiens]
Length = 1452
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYY 139
I+K Q + +++++ E ++ IL+ + K +AWPF +PVD + LGL DY+
Sbjct: 360 IKKPQHTTGK----SKEKLSEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYH 415
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++I KPMD T+K +M+ +EYK +E +DVRL+F N KYN DV MA+ L FE
Sbjct: 416 DIIKKPMDLGTVKTKMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFE 475
Query: 200 EKWLQL 205
++ ++
Sbjct: 476 MRYAKI 481
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 70 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN DV VMA+ L +A+ ++ ++L P V + K ++
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELEPPVPKGPKGKK 183
>gi|413937647|gb|AFW72198.1| global transcription factor group E [Zea mays]
Length = 696
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 35/316 (11%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNIT 116
A K Q S G++ ++ K R +P+ + + E AA K+ E IL+ +
Sbjct: 129 AKKPQKSQRGGTNVIRGA-KGRFLPTKPRPETSTVLSEAAAFKQCE-------AILKKLM 180
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
K++ F PVD+ L + DY++++ PMD T+KK++E+ Y + + DVRL F N
Sbjct: 181 TQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLESGSYTSPSDFAADVRLTFNN 240
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
AM YN VH MA L FE +W + E++ A A + + D A +
Sbjct: 241 AMAYNPRGHAVHDMAIQLNKMFESRWRPI-----------EKKLASAATEKHVEVDRADS 289
Query: 237 KMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEI 293
K R + + DV ++ R+ + + T+ EE+ G L +S P + + L+
Sbjct: 290 K--RRKTPPVDRSDVSMECARQTEPETPKMTA-EEREAFGNCLASISDELPPHIFELLQQ 346
Query: 294 VAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL---------KSQGNNNNNDNNK 344
SN E+E+D+ A S+ L+ LK V L KS+ + N N
Sbjct: 347 CIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQEKEQSQQVKSEPSENEAVNVS 405
Query: 345 NNNNSATNNNKRKREI 360
++S+TN K I
Sbjct: 406 GLSHSSTNPCKGGEPI 421
>gi|395533918|ref|XP_003768996.1| PREDICTED: bromodomain-containing protein 2-like [Sarcophilus
harrisii]
Length = 800
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 6/155 (3%)
Query: 57 ASKKQGSNSKGSSTLKDKEKE--RHVPSIRKQQQEASRREKAAEK-RMEELIRQFGTILR 113
AS G ++ L +E R + RK ++ ++ ++++K ++ E ++ IL+
Sbjct: 300 ASPPGGGPEPKAARLPPTRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILK 359
Query: 114 NITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+ K +AWPF +PVD LGL DY+++I PMD ST+K++ME ++Y++ +E DV
Sbjct: 360 ELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADV 419
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
RL+F N KYN DV MA+ L FE ++ ++
Sbjct: 420 RLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 454
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWLASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+F N YN D+ +MA+TL F +K + L+P
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VALMP 181
>gi|149732108|ref|XP_001496282.1| PREDICTED: bromodomain-containing protein 2-like [Equus caballus]
Length = 804
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|344298832|ref|XP_003421095.1| PREDICTED: bromodomain-containing protein 2 [Loxodonta africana]
Length = 798
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|296197845|ref|XP_002746465.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 800
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|297661247|ref|XP_002809174.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pongo
abelii]
gi|297661249|ref|XP_002809175.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 801
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|440909604|gb|ELR59493.1| Bromodomain-containing protein 2 [Bos grunniens mutus]
Length = 810
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|403261524|ref|XP_003923168.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 800
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|60360108|dbj|BAD90273.1| mKIAA4005 protein [Mus musculus]
Length = 818
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 354 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 408
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 409 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 468
Query: 202 WLQL 205
+ ++
Sbjct: 469 YAKM 472
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 104 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 163
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 164 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 204
>gi|351703550|gb|EHB06469.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 798
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENTYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|301757117|ref|XP_002914388.1| PREDICTED: bromodomain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 803
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|71067345|ref|NP_034368.2| bromodomain-containing protein 2 [Mus musculus]
gi|326368244|ref|NP_001191902.1| bromodomain-containing protein 2 [Mus musculus]
gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Female sterile homeotic-related protein 1; AltName:
Full=Fsrg-1; AltName: Full=Protein RING3
gi|2995270|emb|CAA15819.1| MMRING3.1.2 [Mus musculus]
gi|3041763|dbj|BAA25416.1| Ring3 [Mus musculus]
gi|3811391|gb|AAC69907.1| RING3 [Mus musculus]
gi|74186521|dbj|BAE34749.1| unnamed protein product [Mus musculus]
gi|74214328|dbj|BAE40404.1| unnamed protein product [Mus musculus]
gi|123233747|emb|CAM17898.1| bromodomain containing 2 [Mus musculus]
gi|148678305|gb|EDL10252.1| bromodomain containing 2 [Mus musculus]
gi|187954015|gb|AAI38657.1| Bromodomain containing 2 [Mus musculus]
gi|223459952|gb|AAI38656.1| Bromodomain containing 2 [Mus musculus]
Length = 798
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|178057339|ref|NP_001116557.1| bromodomain-containing protein 2 [Sus scrofa]
gi|147223324|emb|CAN13285.1| bromodomain containing 2 [Sus scrofa]
Length = 803
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|126309678|ref|XP_001369391.1| PREDICTED: bromodomain-containing protein 2-like [Monodelphis
domestica]
Length = 801
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 89/155 (57%), Gaps = 6/155 (3%)
Query: 57 ASKKQGSNSKGSSTLKDKEKE--RHVPSIRKQQQEASRREKAAEK-RMEELIRQFGTILR 113
AS G ++ L +E R + RK ++ ++ ++++K ++ E ++ IL+
Sbjct: 300 ASPPGGGPEPKAARLPPTRRESGRPIKPPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILK 359
Query: 114 NITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+ K +AWPF +PVD LGL DY+++I PMD ST+K++ME ++Y++ +E DV
Sbjct: 360 ELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADV 419
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
RL+F N KYN DV MA+ L FE ++ ++
Sbjct: 420 RLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 454
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWLASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+F N YN D+ +MA+TL F +K + L+P
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VALMP 181
>gi|4826806|ref|NP_005095.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|164419758|ref|NP_001106653.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|426352675|ref|XP_004043835.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426352677|ref|XP_004043836.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Gorilla
gorilla gorilla]
gi|12230989|sp|P25440.2|BRD2_HUMAN RecName: Full=Bromodomain-containing protein 2; AltName:
Full=O27.1.1; AltName: Full=Really interesting new gene
3 protein
gi|577293|dbj|BAA07641.1| KIAA9001 [Homo sapiens]
gi|2980663|emb|CAA43996.1| FSH [Homo sapiens]
gi|52545950|emb|CAH56171.1| hypothetical protein [Homo sapiens]
gi|119624068|gb|EAX03663.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624069|gb|EAX03664.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624071|gb|EAX03666.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|168277492|dbj|BAG10724.1| bromodomain-containing protein 2 [synthetic construct]
Length = 801
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|114052340|ref|NP_001039331.1| bromodomain-containing protein 2 [Bos taurus]
gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Bromodomain-containing protein 2
gi|63169167|gb|AAY34703.1| bromodomain containing 2 [Bos taurus]
gi|296474561|tpg|DAA16676.1| TPA: bromodomain-containing protein 2 [Bos taurus]
Length = 803
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|114326383|ref|NP_001041552.1| bromodomain-containing protein 2 [Canis lupus familiaris]
gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromodomain-containing protein 2
gi|55956582|emb|CAI11405.1| bromodomain-containing protein 2 [Canis lupus familiaris]
Length = 803
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|3273701|gb|AAC24810.1| female sterile homeotic-related protein Frg-1 [Mus musculus]
Length = 798
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|380815348|gb|AFE79548.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|380815350|gb|AFE79549.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420527|gb|AFH33477.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420529|gb|AFH33478.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948624|gb|AFI37917.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948626|gb|AFI37918.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 802
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus musculus]
gi|62945214|dbj|BAD97682.1| bromodomain-containing Brd2 protein [Mus musculus]
Length = 752
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|426250128|ref|XP_004018790.1| PREDICTED: bromodomain-containing protein 2 [Ovis aries]
Length = 803
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|397474356|ref|XP_003808648.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Pan paniscus]
Length = 800
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomain-containing protein 2 isoform 10 [Pan
troglodytes]
gi|114606774|ref|XP_001168036.1| PREDICTED: bromodomain-containing protein 2 isoform 11 [Pan
troglodytes]
gi|410213772|gb|JAA04105.1| bromodomain containing 2 [Pan troglodytes]
gi|410213774|gb|JAA04106.1| bromodomain containing 2 [Pan troglodytes]
gi|410267650|gb|JAA21791.1| bromodomain containing 2 [Pan troglodytes]
gi|410267652|gb|JAA21792.1| bromodomain containing 2 [Pan troglodytes]
gi|410303978|gb|JAA30589.1| bromodomain containing 2 [Pan troglodytes]
gi|410303980|gb|JAA30590.1| bromodomain containing 2 [Pan troglodytes]
gi|410354717|gb|JAA43962.1| bromodomain containing 2 [Pan troglodytes]
gi|410354719|gb|JAA43963.1| bromodomain containing 2 [Pan troglodytes]
Length = 800
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|109070687|ref|XP_001115845.1| PREDICTED: hypothetical protein LOC717893 isoform 7 [Macaca
mulatta]
gi|109070689|ref|XP_001115854.1| PREDICTED: hypothetical protein LOC717893 isoform 8 [Macaca
mulatta]
Length = 802
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|395832114|ref|XP_003789121.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 791
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 326 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 380
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 381 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 440
Query: 202 WLQL 205
+ ++
Sbjct: 441 YAKM 444
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 76 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENSYYWAASECMQD 135
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 136 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 176
>gi|431916886|gb|ELK16646.1| Bromodomain-containing protein 2 [Pteropus alecto]
Length = 833
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 366 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 420
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 421 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 480
Query: 202 WLQL 205
+ ++
Sbjct: 481 YAKM 484
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 116 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 175
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 176 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 216
>gi|47059183|ref|NP_997660.1| bromodomain-containing protein 2 [Rattus norvegicus]
gi|392355205|ref|XP_003751971.1| PREDICTED: bromodomain-containing protein 2-like [Rattus
norvegicus]
gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Protein RING3
gi|46237556|emb|CAE83937.1| bromodomain-containing 2 [Rattus norvegicus]
gi|149043366|gb|EDL96817.1| bromodomain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|410958884|ref|XP_003986043.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Felis catus]
gi|410958886|ref|XP_003986044.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Felis catus]
Length = 804
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
Length = 690
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 14/235 (5%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++Q +L+ + H++ W F PVDV L + DY+ VI PMD T+K ++ + Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIKHPMDLGTVKNKLTSGTYSCP 196
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN +DV VMA TL FE +W L K++ + E ++A
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVFVMADTLRKFFEVRWKTLEKKLSGIKVHTEPSNSDA 256
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRL 282
+ + AK R TS VD E + + ++ T+E R KLG L L
Sbjct: 257 HEEKHIVIPVPMAK-KRKTS----AVDC------ENVSEPVKRVMTDEDRLKLGKDLESL 305
Query: 283 SPEDLGKALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFVKDALKSQGN 336
+ E + + + N+ +E+E+D++ S L++L+ + + L+ N
Sbjct: 306 T-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSHHALFQLRDLLDEHLRESQN 359
>gi|52545923|emb|CAH56179.1| hypothetical protein [Homo sapiens]
Length = 754
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|313747419|ref|NP_001186385.1| bromodomain-containing protein 2 isoform 3 [Homo sapiens]
gi|426352681|ref|XP_004043838.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Gorilla
gorilla gorilla]
gi|182769|gb|AAA68890.1| putative [Homo sapiens]
Length = 754
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|417404705|gb|JAA49093.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 799
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|297661251|ref|XP_002809176.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Pongo
abelii]
Length = 754
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|114606788|ref|XP_001167666.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pan
troglodytes]
Length = 753
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|297290567|ref|XP_001115810.2| PREDICTED: hypothetical protein LOC717893 isoform 2 [Macaca
mulatta]
Length = 755
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|402866610|ref|XP_003897472.1| PREDICTED: bromodomain-containing protein 2 [Papio anubis]
Length = 804
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|1370115|emb|CAA65450.1| kinase [Homo sapiens]
Length = 754
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
Length = 1541
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 77 ERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGL 133
+ ++P + Q+ S ++++ E ++ IL+ + K +AWPF +PVD + L
Sbjct: 408 QANMPLMGAMAQQPSHTGVKGKEKLSEALKSCNDILKELFAKKHSSYAWPFYKPVDAELL 467
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
GL DY+E+I KPMD T+K +M+ ++YK E +DVRL+F N KYN DV MA+
Sbjct: 468 GLHDYHEIIKKPMDLGTVKAKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARK 527
Query: 194 LLAKFEEKWLQL 205
L FE ++ ++
Sbjct: 528 LQDIFEMRYAKV 539
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I KPMD TIKK++E Y + +E D
Sbjct: 101 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 160
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN DV VMA+ L +A+ ++ ++L P V + K ++
Sbjct: 161 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQMPKEEVELDPPVPKGPKGKK 214
>gi|348576418|ref|XP_003473984.1| PREDICTED: bromodomain-containing protein 2 [Cavia porcellus]
Length = 802
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENTYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|325190099|emb|CCA24581.1| histone acetyltransferase putative [Albugo laibachii Nc14]
Length = 2117
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 76/125 (60%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
M +L ++ +L+ + +HK+ W F PVD L + DY+ I +PMD TIKK+++ Y
Sbjct: 1090 MPQLKKRLEVLLKGMMEHKFGWVFSSPVDTVALEIPDYFRTIRRPMDLGTIKKKLDLGFY 1149
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
K+++ +DVRL F NA YN E SDVH +AK +L F ++ +L + E+E+ + +E
Sbjct: 1150 KHIQHFASDVRLTFNNAKLYNSEGSDVHNLAKDMLNDFNVEFRKLEIDINEQERLQRLKE 1209
Query: 221 AEAQL 225
A +L
Sbjct: 1210 AACRL 1214
>gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa]
Length = 756
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|291396003|ref|XP_002714557.1| PREDICTED: bromodomain containing 2 [Oryctolagus cuniculus]
Length = 802
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|444519083|gb|ELV12566.1| Bromodomain-containing protein 2 [Tupaia chinensis]
Length = 743
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 275 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 329
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 330 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 389
Query: 202 WLQL 205
+ ++
Sbjct: 390 YAKM 393
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 88 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 147
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 148 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 188
>gi|145347283|ref|XP_001418103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578331|gb|ABO96396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 859
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 57 ASKKQGS--NSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
SKK+GS N G L+D R V + R Q++ E+A + R +E+IR+ +L
Sbjct: 227 GSKKKGSAANLAGVKKLRDG---RAVTTQRLQKE--YEVEQARDARRKEMIRRCREVLIA 281
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
+HK+ F+ PVD K G+ DY+++I PMD T+K +++ K Y N E C D+RL+F
Sbjct: 282 SKKHKYHKIFLVPVDPKKHGVPDYFDIIKNPMDMGTVKTKLDTKAYLNPAEFCADMRLIF 341
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
N + YN SD VM +T+ FE WL
Sbjct: 342 SNGLLYNGTASDAGVMTETVRQLFETAWL 370
>gi|313747417|ref|NP_001186384.1| bromodomain-containing protein 2 isoform 2 [Homo sapiens]
gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapiens]
Length = 836
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 477
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 19/259 (7%)
Query: 81 PSIRKQQQE----ASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLD 136
P +R +Q SR + ++++ T+L + HK WPF PVD L +
Sbjct: 134 PPVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWSHKSGWPFRTPVDPVMLNIP 193
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DY+ VI PMD TI+ ++ EY + + DVRL F N++ YN + H MA+ +
Sbjct: 194 DYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISK 253
Query: 197 KFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL 256
FE W + K+ + + A L+ ++ + A + N+ ++L
Sbjct: 254 YFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMND--------NKL 305
Query: 257 REMLVQKCRKTSTE-EKRKLGAALTRLSPEDLGKALE--IVAQSNTGFQATAEEVELDMD 313
R V+ + T+ EK+KLG L L ED + + + QS + Q+ E+E+D++
Sbjct: 306 R---VEPAKLVMTDGEKKKLGQDLMALE-EDFPQKIADLLREQSGSDGQSGEGEIEIDIE 361
Query: 314 AQSESTLWRLKFFVKDALK 332
A S+ L+ ++ + D L+
Sbjct: 362 ALSDEILFMVRKLLDDYLR 380
>gi|195130189|ref|XP_002009535.1| GI15407 [Drosophila mojavensis]
gi|193907985|gb|EDW06852.1| GI15407 [Drosophila mojavensis]
Length = 2056
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 36 IFQKVDKLEERVNEIEQFYLNASKKQG-------SNSKGSSTLKDKEKERHVPSIRKQQQ 88
+ +K D N E Y K SN +GS VP +
Sbjct: 432 VKRKADTTTPTANAFESPYAQMDAKAAKIATRRESNRQGSGYPMSPLGVAGVPGLVAGGA 491
Query: 89 EASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
+++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KP
Sbjct: 492 IGGVAGAKSKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKP 551
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD T+K++M+ +EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 552 MDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 611
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
Y + +E D +F N YN DV VMA+TL F +K ++ +PK
Sbjct: 95 YWSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus]
Length = 549
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|55725298|emb|CAH89514.1| hypothetical protein [Pongo abelii]
Length = 546
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|33417197|gb|AAH55508.1| Brd2b protein [Danio rerio]
gi|159155579|gb|AAI54432.1| Brd2b protein [Danio rerio]
Length = 558
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 81/135 (60%), Gaps = 10/135 (7%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDY 138
S+R Q SRR K +++ +R +L+ + K +AWPF +PVD LGL DY
Sbjct: 324 SVRPHQ--PSRRGKLSKQ-----LRYCSGVLKELLSKKHVAYAWPFYKPVDASALGLHDY 376
Query: 139 YEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKF 198
+++I PMD STIK++M+ +EY+ ++ DVRL+F N KYN DV MA+ L F
Sbjct: 377 HDIIKHPMDLSTIKRKMDEREYREAQQFSADVRLMFSNCYKYNPPDHDVVSMARKLQDVF 436
Query: 199 EEKWLQLLPKVTEEE 213
E ++ ++ +V++EE
Sbjct: 437 EFRFAKMPDEVSDEE 451
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H +AWPF +PVD L L DY+++I +PMD TIKK++E Y+ E D
Sbjct: 59 VLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQD 118
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 119 FNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQM 154
>gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taurus]
Length = 558
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 335 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 389
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 390 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 449
Query: 202 WLQL 205
+ ++
Sbjct: 450 YAKM 453
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 85 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 144
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 145 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 185
>gi|67972378|dbj|BAE02531.1| unnamed protein product [Macaca fascicularis]
Length = 776
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|226493082|ref|NP_001142377.1| hypothetical protein [Zea mays]
gi|194708534|gb|ACF88351.1| unknown [Zea mays]
gi|414585390|tpg|DAA35961.1| TPA: hypothetical protein ZEAMMB73_681303 [Zea mays]
Length = 451
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
E+ ++ G IL + + K + F PV+V+ LGL DY+ VI +PMD T+K+ + A Y +
Sbjct: 108 EVRKRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVKEGLAAGRYAS 167
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK-RREEEEA 221
+ DVRL F NA++YN +VH A LLA FE + + L E+ K
Sbjct: 168 HDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALACFEEDCKRPEPPRPV 227
Query: 222 EAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTR 281
+L A + AK+ N V + + RE R+ S EEK L L
Sbjct: 228 PPELTPPPAAEPVEAKVKPRAGN----VRMRKPKARE---PNKREMSLEEKNMLRVGLES 280
Query: 282 LSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
L E + L+IV + N + +E+ELD+D T W L FV
Sbjct: 281 LPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFV 326
>gi|432094627|gb|ELK26133.1| Bromodomain-containing protein 2 [Myotis davidii]
Length = 881
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 419 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 473
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 474 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 533
Query: 202 WLQL 205
+ ++
Sbjct: 534 YAKM 537
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 169 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 228
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 229 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 269
>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
Length = 729
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 266 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 325
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 326 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 385
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 386 ARKLQDVFEFSYAKM 400
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|47209011|emb|CAF91369.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 37/252 (14%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD + L L DY+++I PMD ST+K++M+ EY + DVRL+F N +
Sbjct: 279 YAWPFYEPVDAEALQLHDYHDIIKYPMDLSTVKRKMDGGEYPDADSFAADVRLIFSNCYR 338
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL---------LPKVTEEEKRREEEEAEAQLDMQLA 230
YN + +V AK L FE+ + ++ P + R +E A ++Q
Sbjct: 339 YNPAQLEVVAQAKKLQGVFEKSFAKIPDEPANPGQAPAAASGKSDRTDERAAPLAEVQEQ 398
Query: 231 QDAAHAKMARDTSNELYEVDVH----LDELREMLVQ-----------------------K 263
A K A D + EV + D+ + Q K
Sbjct: 399 AGADQDKAAPDRLAAVSEVPPNKRKKKDDQNNIDRQNRGSPTFDSGNLWKKLKSWDPEAK 458
Query: 264 CRKTSTEEKRKLGAALTRLSPEDLGKALEIV-AQSNTGFQATAEEVELDMDAQSESTLWR 322
C + EEK +L + RL + LG ++I+ + +A +E+E+D + STL +
Sbjct: 459 CLPLTYEEKHQLSLDINRLPGKKLGCVVQIIQTLEPSTCEANPDEIEIDFEVLKPSTLRQ 518
Query: 323 LKFFVKDALKSQ 334
L+ +VK L Q
Sbjct: 519 LQQYVKHCLHQQ 530
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
+R +L +++++ +H +AWPF +PVD LGL DY+++I PMD TIKK++E
Sbjct: 28 RRTNQLQFMQNVVVKSLWRHHYAWPFYEPVDAVALGLSDYHKIITSPMDLGTIKKRLENN 87
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
Y E D +F N YN D+ +MA TL E+ +LQ + ++ +EE
Sbjct: 88 YYWTASECLQDFNTMFTNCYIYNKPTDDIVLMALTL----EKIFLQKVGQMPQEE 138
>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
terrestris]
Length = 497
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Query: 97 AEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
+++++ E ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K
Sbjct: 8 SKEKLSEALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKT 67
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+M+ +EYK +E +DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 68 KMDNREYKTAQEFASDVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 119
>gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus musculus]
Length = 503
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
Length = 779
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 316 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 375
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 376 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 435
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 436 ARKLQDVFEFSYAKM 450
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 50 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 109
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 170 KIFLQKVAQMPP 181
>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
Length = 779
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 316 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 375
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 376 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 435
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 436 ARKLQDVFEFSYAKM 450
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 50 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 109
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 170 KIFLQKVAQMPP 181
>gi|351697075|gb|EHA99993.1| Bromodomain testis-specific protein [Heterocephalus glaber]
Length = 832
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF PVDV LGL +YY+++ PMD TIKK+M+
Sbjct: 221 KITEQLKHCNEILKEMLSKKHFSYAWPFHSPVDVNALGLHNYYDIVKNPMDLGTIKKKMD 280
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN D+ MAKTL FE
Sbjct: 281 NQEYKDAYEFAADVRLMFMNCYKYNSPDHDIVAMAKTLQDVFE 323
>gi|123233748|emb|CAM17899.1| bromodomain containing 2 [Mus musculus]
Length = 473
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 184
>gi|74190894|dbj|BAE28228.1| unnamed protein product [Mus musculus]
Length = 473
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 334 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 388
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 389 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 448
Query: 202 WLQL 205
+ ++
Sbjct: 449 YAKM 452
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 84 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+TL F +K
Sbjct: 144 FNTMFTNCYIYNKPTDDIVLMAQTLKKIFLQK 175
>gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus]
gi|2780779|dbj|BAA24379.1| Ring3 [Mus musculus]
Length = 503
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 288 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 342
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+K++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 343 IKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 402
Query: 202 WLQL 205
+ ++
Sbjct: 403 YAKM 406
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 38 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 98 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 138
>gi|432855679|ref|XP_004068304.1| PREDICTED: bromodomain testis-specific protein-like [Oryzias
latipes]
Length = 969
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E +R IL+ + + +AWPF PVD LGL DY+++I +PMD STIKK+M+
Sbjct: 254 RLTEKLRDCNNILKEMLSKRHCAYAWPFYTPVDAIALGLQDYHDIIKQPMDLSTIKKKMD 313
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY N E DVRL+F N +YN V MA+ L FE +++++
Sbjct: 314 HQEYTNATEFAADVRLMFSNCYRYNPPSHGVVYMARKLQEVFEARYMKM 362
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H+++WPF QPVD L + DYY++I PMD T+ ++++ + Y E D
Sbjct: 39 VVIKALWRHQYSWPFRQPVDAVALCIPDYYKLIKHPMDLGTVMQRLKNRYYWEANECIKD 98
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQL 229
+ +F N YN D+ MA+TL E+ +LQ + ++ +EE + E + + +
Sbjct: 99 ISTMFNNCYVYNRPGDDIVFMAQTL----EKIFLQKVSQMPKEEVIATLPKDEPEKEEPV 154
Query: 230 AQDAAHAKMARDTSNELYEVDVHLDELREMLVQ--------KCRKTSTEEKRKLGAALTR 281
Q +++A + L VHL+ + Q KC K + A L+R
Sbjct: 155 KQRPVVSEIALQEATVLSN-GVHLNTPTRLCAQTDSTLNIKKCLKKKMVSGTPVTATLSR 213
Query: 282 ---LSPEDLGKALEIVAQSNTGFQATAEEVELDM 312
+ E+ ++ +++++ +G + LDM
Sbjct: 214 GDEFAAEEHSASIPLISRTGSGRPVKPPKKNLDM 247
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRL 323
+ + +EK++L + + L + LG+ L I+ + Q + E+V +D D STL L
Sbjct: 497 KPVTYQEKKQLKSDINMLPGDKLGELLNIIKSRESYLQESNLEDVVIDFDMVKPSTLTVL 556
Query: 324 KFFVKDALKSQGNNNNN 340
+ FV + LK +G + N+
Sbjct: 557 QRFVAECLKKRGKSGNS 573
>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 270 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 329
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 330 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 389
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 390 ARKLQDVFEFSYAKM 404
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
Length = 735
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 270 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 329
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 330 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 389
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 390 ARKLQDVFEFSYAKM 404
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 270 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 329
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 330 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 389
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 390 ARKLQDVFEFSYAKM 404
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKLPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 270 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 329
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 330 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 389
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 390 ARKLQDVFEFSYAKM 404
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 270 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 329
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 330 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 389
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 390 ARKLQDVFEFSYAKM 404
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|7512236|pir||T28145 RING3 kinase - chicken
gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 270 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 329
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 330 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 389
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 390 ARKLQDVFEFSYAKM 404
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|224013522|ref|XP_002296425.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968777|gb|EED87121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1718
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 67/104 (64%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
ILR + H+ W F PVD LGLDDY++VI KPMD TI ++++ Y + +DV
Sbjct: 838 ILRELQIHEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLDNGSYHAFDDFKSDV 897
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
RL F+NAMKYNDE S VH MAK L KF+ + +L+ ++ +E +
Sbjct: 898 RLTFENAMKYNDENSVVHEMAKELKKKFDTDYKKLMKQLEKEHR 941
>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
Length = 733
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 270 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 329
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 330 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 389
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 390 ARKLQDVFEFSYAKM 404
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 4 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 63
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 64 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 123
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 124 KIFLQKVAQMPP 135
>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
Length = 1351
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 103 ELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
E +R +I+R + K +AWPF +PVDV+ LGL DY E+I PMD TIK +ME ++
Sbjct: 370 EQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRD 429
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
YK +E +DVRL+F N KYN +V +MA+ L FE ++ ++
Sbjct: 430 YKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 475
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF PVDV L L DY+++I PMD TIKK++E Y N +E D
Sbjct: 70 VLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQECIQDF 129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMPQEE 168
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 261 VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSEST 319
Q+CR S EEKR+L + +L E LG+ + I+ + + +E+E+D + ST
Sbjct: 630 TQRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPST 689
Query: 320 LWRLKFFVKDALK 332
L L+ +V L+
Sbjct: 690 LRELERYVTSCLR 702
>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
Length = 779
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
+E R + +K ++ + + + + ++ E ++ IL+ + K +AWPF +PVD
Sbjct: 316 RESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYAWPFYKPVDA 375
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
LGL DY+E+I PMD STIK++ME ++Y + +E DVRL+F N KYN DV M
Sbjct: 376 SALGLHDYHEIIKHPMDLSTIKRKMENRDYHDAQEFAADVRLMFSNCYKYNPPDHDVVAM 435
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE + ++
Sbjct: 436 ARKLQDVFEFSYAKM 450
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 50 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 109
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 110 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 169
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 170 KIFLQKVAQMPP 181
>gi|345488357|ref|XP_001603224.2| PREDICTED: hypothetical protein LOC100119446 isoform 1 [Nasonia
vitripennis]
Length = 1549
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYY 139
I+K Q +S+ + ++ E ++ IL+ + K +AWPF +PVD + LGL DY+
Sbjct: 372 IKKPQHTSSKLKD----KLSEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYH 427
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++I KPMD T+K +M+ +EY E DVRL+F N KYN DV MAK L FE
Sbjct: 428 DIIKKPMDLGTVKVKMDKREYNTASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFE 487
Query: 200 EKWLQL 205
++ ++
Sbjct: 488 MRYAKI 493
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I MD TIKK++E Y + +E D+
Sbjct: 70 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+TL F K Q+
Sbjct: 130 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 164
>gi|198469092|ref|XP_002134216.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
gi|198146712|gb|EDY72843.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
Length = 1981
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLD 136
VP + AS +++++ + ++ IL+ + K +AWPF +PVD + LGL
Sbjct: 462 VPGLLAAGVVASVAAAKSKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLH 521
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DY+++I KPMD T+K++M+ +EYK+ E DVRL+F N KYN DV M + L
Sbjct: 522 DYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQD 581
Query: 197 KFEEKWLQL 205
FE ++ +
Sbjct: 582 VFEMRYANI 590
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ I +H +AWPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 45 TVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+F N YN DV VMA+TL E+ +LQ + + +EE E A+
Sbjct: 105 FNTMFNNCYVYNKPGEDVVVMAQTL----EKVFLQKIETMPKEELELEPATAKG 154
>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 741
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L++ +L+ + H++AW F PVDV L L DY+ +I +PMD T+K ++ + EY
Sbjct: 177 LMKDCELLLKRLMNHQYAWVFNTPVDVVKLNLPDYFTIIKRPMDLGTVKNKLASGEYAGP 236
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
E DV+L F NAM YN +DVH+MA TL FE +W
Sbjct: 237 LEFADDVKLTFSNAMDYNPSGNDVHLMADTLNKYFELRW 275
>gi|345488359|ref|XP_003425887.1| PREDICTED: hypothetical protein LOC100119446 isoform 3 [Nasonia
vitripennis]
Length = 1549
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYY 139
I+K Q +S+ + ++ E ++ IL+ + K +AWPF +PVD + LGL DY+
Sbjct: 378 IKKPQHTSSKLKD----KLSEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYH 433
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++I KPMD T+K +M+ +EY E DVRL+F N KYN DV MAK L FE
Sbjct: 434 DIIKKPMDLGTVKVKMDKREYNTASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFE 493
Query: 200 EKWLQL 205
++ ++
Sbjct: 494 MRYAKI 499
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I MD TIKK++E Y + +E D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+TL F K Q+
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 170
>gi|345488355|ref|XP_003425886.1| PREDICTED: hypothetical protein LOC100119446 isoform 2 [Nasonia
vitripennis]
gi|345488361|ref|XP_003425888.1| PREDICTED: hypothetical protein LOC100119446 isoform 4 [Nasonia
vitripennis]
Length = 1555
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYY 139
I+K Q +S+ + ++ E ++ IL+ + K +AWPF +PVD + LGL DY+
Sbjct: 378 IKKPQHTSSKLKD----KLSEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLGLHDYH 433
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++I KPMD T+K +M+ +EY E DVRL+F N KYN DV MAK L FE
Sbjct: 434 DIIKKPMDLGTVKVKMDKREYNTASEFAADVRLIFTNCYKYNPPDHDVVAMAKKLQDVFE 493
Query: 200 EKWLQL 205
++ ++
Sbjct: 494 MRYAKI 499
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I MD TIKK++E Y + +E D+
Sbjct: 76 VLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRLENTYYWSGKECVQDL 135
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+TL F K Q+
Sbjct: 136 NTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 170
>gi|170582857|ref|XP_001896320.1| Bromodomain containing protein [Brugia malayi]
gi|158596511|gb|EDP34844.1| Bromodomain containing protein [Brugia malayi]
Length = 1009
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+ WPF++PVDV+GL L+DYY+++ PMD TI+++++AK+Y E+ DV L+ +N K
Sbjct: 236 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYATPEELRADVILICENCYK 295
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMA 239
YN +H + L FE+KW Q+ EE +EE A + + +HA
Sbjct: 296 YNPTSDPIHQHGRALQKYFEDKWRQM-----PEEPSAIDEETTAVVATSIPAPISHAPAH 350
Query: 240 RDTS 243
TS
Sbjct: 351 AVTS 354
>gi|328703281|ref|XP_001944541.2| PREDICTED: hypothetical protein LOC100164694 [Acyrthosiphon pisum]
Length = 1162
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+++I KPMD T+K +++ +EYKN ++ DV L+F N K
Sbjct: 361 YAWPFYKPVDAAWLGLHDYHDIIKKPMDLGTVKTKLDNREYKNSKDFAADVNLIFSNCYK 420
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLLP 207
YN + DV MAK L A FE K ++ P
Sbjct: 421 YNPKDHDVVAMAKKLQAVFEAKMSKVPP 448
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H+ AWPF QPVD L L DY++VI PMD T+KK++E Y E D
Sbjct: 79 TVMKALWKHQHAWPFYQPVDASKLNLPDYHKVIKTPMDLGTVKKRLENNYYWCADECIQD 138
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
+ +F N YN DV +MA+TL F K Q++
Sbjct: 139 INAMFSNCYTYNKPGEDVVLMAQTLEKIFLAKMGQMV 175
>gi|348541135|ref|XP_003458042.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 821
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 57 ASKKQGSNSKGSSTLKDKEKERHVP-SIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
+K G N +G S K ++ +P SI RR K + + +R +L+ +
Sbjct: 349 GTKGAGGNRRGVSGRPIKPPKKDLPDSILP---PPVRRSKLSPQ-----MRYCSGVLKEL 400
Query: 116 TQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
K +AWPF +PVD LGL DY+++I +PMD STIK++M+ +EY+ + DVRL
Sbjct: 401 LSKKHAAYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDGREYREAHQFSADVRL 460
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFE 199
+F N KYN DV MA+ L FE
Sbjct: 461 MFSNCYKYNPPDHDVVAMARKLQDVFE 487
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H +AWPF +PVD L L DY+++I PMD TIKK++E Y++ E D
Sbjct: 86 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 145
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 146 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 181
>gi|125549798|gb|EAY95620.1| hypothetical protein OsI_17475 [Oryza sativa Indica Group]
Length = 456
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 140/332 (42%), Gaps = 53/332 (15%)
Query: 3 AMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQG 62
A P S++ A+ G +A E+ LR D + ++ ++ + I+ + K+ G
Sbjct: 49 ATRPPPSSYVALRPGA----MAHREARALR-DRLAGELGQVRALIARIDTWQQGQVKRHG 103
Query: 63 SNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAW 122
S R +P+ + + A R KR E+++ + LR + W
Sbjct: 104 S------------PRRDLPTPPAKLRAAMR------KRCEQILAK----LRKDKRSIW-- 139
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
F PV+V LGL DY+ VI PMD T++ + A Y + + DVRL F NA++YN
Sbjct: 140 -FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNP 198
Query: 183 ERSDVHVMAKTLLAKFEE------KWL-QLLPKVTEEEKRREEEEAEAQLDMQLAQDAAH 235
+VH A LLA FE+ W Q L + E A +Q+ AA+
Sbjct: 199 AGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQVKPRAAN 258
Query: 236 AKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVA 295
KM + + E + D+ L EEK L L L E + L+IV
Sbjct: 259 VKMRKPKAREPNKRDMTL----------------EEKNLLRVGLESLPEEKMHNVLQIVR 302
Query: 296 QSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
+ N + E+ELD+D T W L FV
Sbjct: 303 KRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
>gi|300121324|emb|CBK21704.2| unnamed protein product [Blastocystis hominis]
Length = 304
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L+ + HKWA PF+ PVD LGL DY++V+ PMDFSTI Q+E E ++ E + V
Sbjct: 8 LKKLMMHKWAGPFLHPVDPVALGLSDYFDVVKHPMDFSTILSQIENHELRSKDEFASKVN 67
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKF 198
LVF NA+ YN + SDVH+MA L + F
Sbjct: 68 LVFDNALLYNSKGSDVHIMASELQSLF 94
>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
Length = 1469
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 99 KRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
KR E+L R +L+ + K +AWPF +PVD K LGL DY+++I PMD STIKK++
Sbjct: 429 KRQEQL-RFCARLLKEMLSKKHVAYAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKKKL 487
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+ ++Y++ +E DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 488 DNRQYRDAQEFAADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEMRFAKM 537
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H +AWPF PVD LGL DYY++I PMD TIKK++E Y N +E D
Sbjct: 49 VLKTLWKHHFAWPFQAPVDAVKLGLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 108
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 109 NTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKITEMPQEE 147
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
+C+ S EEKR+L + +L + LG+ + I+ + + +E+E+D + STL
Sbjct: 735 RCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLKPSTLR 794
Query: 322 RLKFFVKDAL 331
L+ +V L
Sbjct: 795 ELEKYVSSCL 804
>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A+EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 362 SQQHPASEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 421
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 422 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 481
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 86 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 142
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 143 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 184
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 630 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 689
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 690 ELERYVTSCLR 700
>gi|242077236|ref|XP_002448554.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
gi|241939737|gb|EES12882.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
Length = 458
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
++ G IL + + K + F PV+V+ LGL DY+ VI +PMD T+K+ + A Y + +
Sbjct: 117 KRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHTVIKRPMDLGTVKEGLAAGRYASHDD 176
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQL 225
DVRL F NA++YN +VH A LLA FE + + L EE+ R E +
Sbjct: 177 FAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALANF--EEECRSLEPPPRPV 234
Query: 226 DMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPE 285
++L A + V + + RE R+ S EEK L L L E
Sbjct: 235 AVELPPPPAAEPVEAKVKPRAGNVRMRKPKARE---PNKREMSLEEKNMLRIGLESLPEE 291
Query: 286 DLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
+ L+IV + N + +E+ELD+D T W L FV
Sbjct: 292 KMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFV 333
>gi|115460642|ref|NP_001053921.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|38344165|emb|CAE03496.2| OSJNBa0053K19.4 [Oryza sativa Japonica Group]
gi|38345713|emb|CAD41835.2| OSJNBb0085C12.15 [Oryza sativa Japonica Group]
gi|113565492|dbj|BAF15835.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|215695153|dbj|BAG90344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 140/332 (42%), Gaps = 53/332 (15%)
Query: 3 AMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQG 62
A P S++ A+ G +A E+ LR D + ++ ++ + I+ + K+ G
Sbjct: 49 ATRPPPSSYVALRPGA----MAHREARALR-DRLAGELGQVRALIARIDTWQQGQVKRHG 103
Query: 63 SNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAW 122
S R +P+ + + A R KR E+++ + LR + W
Sbjct: 104 S------------PRRDLPTPPAKLRAAMR------KRCEQILAK----LRKDKRSIW-- 139
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
F PV+V LGL DY+ VI PMD T++ + A Y + + DVRL F NA++YN
Sbjct: 140 -FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYNP 198
Query: 183 ERSDVHVMAKTLLAKFEE------KWL-QLLPKVTEEEKRREEEEAEAQLDMQLAQDAAH 235
+VH A LLA FE+ W Q L + E A +Q+ AA+
Sbjct: 199 AGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQVKPRAAN 258
Query: 236 AKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVA 295
KM + + E + D+ L EEK L L L E + L+IV
Sbjct: 259 VKMRKPKAREPNKRDMTL----------------EEKNLLRVGLESLPEEKMHNVLQIVR 302
Query: 296 QSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
+ N + E+ELD+D T W L FV
Sbjct: 303 KRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 1364
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|397609097|gb|EJK60217.1| hypothetical protein THAOC_19472 [Thalassiosira oceanica]
Length = 1735
Score = 98.6 bits (244), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/110 (44%), Positives = 72/110 (65%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
EL + G IL+++ H+ W F PV+ LGLDDY+++I KPMD TI K++E Y +
Sbjct: 856 ELKSKCGEILKSLQNHENGWVFSTPVNPVELGLDDYFDIIKKPMDLGTIGKKLEQGSYHS 915
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
E +DVRL F+NAMKYN+E++ VH MAK KF+E + ++L + +E
Sbjct: 916 FDEFKSDVRLTFENAMKYNEEQTVVHEMAKGFKKKFDEDYKKMLKSLDKE 965
>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
Length = 1300
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Pan paniscus]
Length = 1362
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Protein HUNK1
gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
Length = 1362
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
abelii]
Length = 1363
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
gorilla]
Length = 1362
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
Length = 1346
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
Length = 1366
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|213405871|ref|XP_002173707.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001754|gb|EEB07414.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 596
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 5/152 (3%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEAS--RREKAAEKRMEELIRQFGTILRNI 115
+K++GS + +ST + + ++ H P++ + K+ +++ +R TI++ +
Sbjct: 179 TKRRGSTASSTSTAETRSRKLHSPAVSVPAPPVAVVNDTKSQRRKLSSQMRFCSTIIKEL 238
Query: 116 TQHKW---AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
+ ++ A+PF QPVD DY+++I PMD ST++K++ EY+ + D+RL
Sbjct: 239 HKRQYSTFAYPFYQPVDPVACDCPDYFDIIKHPMDLSTVQKKLNNGEYETPSDFEADIRL 298
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
+F N YN + VH M + L A F+EKWL
Sbjct: 299 IFNNCYTYNPVGTPVHEMGRKLEAVFDEKWLH 330
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
I+R + + K + PF PVD + DY +I PMD TI+K++ Y + +E D+
Sbjct: 72 IVRQLKRTKDSIPFRAPVDPVKQNIPDYPTIIKHPMDLGTIEKRLTGHIYNSAQEFIDDM 131
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL------LPKVTEEEKRR 216
RL+F N YN S V VM K + FE + QL LP T++ KRR
Sbjct: 132 RLMFSNCFTYNGTTSPVGVMGKNIETIFERQLKQLPSSNADLPP-TKKTKRR 182
>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
Length = 617
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 234 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 293
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 294 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 353
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 501 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 560
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 561 ELERYVTSCLR 571
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD TIKK++E Y N +E D +F N YN D+ +MA+ L F +K +L
Sbjct: 1 MDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINEL 60
>gi|355673420|gb|AER95166.1| bromodomain containing 2 [Mustela putorius furo]
Length = 613
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 85 KQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEV 141
+QQ ++S++ K +E+ ++ IL+ + K +AWPF +PVD LGL DY+++
Sbjct: 343 QQQHQSSKKGKLSEQ-----LKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDI 397
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD ST+ ++ME ++Y++ +E DVRL+F N KYN DV MA+ L FE +
Sbjct: 398 IKHPMDLSTVXRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFR 457
Query: 202 WLQL 205
+ ++
Sbjct: 458 YAKM 461
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 93 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 152
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 153 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 193
>gi|242009661|ref|XP_002425601.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
gi|212509494|gb|EEB12863.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
Length = 803
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 96 AAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
++++++ E ++ IL+ + K +AWPF +PVD + LGL DY+E+I KPMD T+K
Sbjct: 344 SSKEKLSESLKSCNEILKELFSRKHAGYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVK 403
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+M+ ++Y+ E DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 404 TKMDNRQYRTASEFAADVRLIFTNCYKYNPSTHDVVAMARKLQDVFEMRYAKI 456
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + HK+AWP ++PVD K L L DY+ +I +PMD +TIKK++E Y N +E D
Sbjct: 64 VIKAVCAHKYAWPLLEPVDAKKLNLPDYHRIIKQPMDLTTIKKRLENNYYWNAKECIQDF 123
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
+F N YN + DV VMA+ + F K + LPK
Sbjct: 124 NTMFTNCYVYNQPQEDVVVMAQIVEKLFLTK-ISTLPK 160
>gi|395822025|ref|XP_003784325.1| PREDICTED: bromodomain testis-specific protein [Otolemur garnettii]
Length = 928
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
Query: 63 SNSKGSSTLKDKEKERHVP---SIRKQQQEASRREKAAEK--RMEELIRQFGTILRNITQ 117
+NS+ S L +K+ R P +++K S+++ K ++ E +R IL+ +
Sbjct: 229 ANSESSPILTEKQSARMPPIKENVQKNVLPDSQQQYNVGKSVKVTEQLRHCSEILKEMLA 288
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF PVDV LGL +YY+++ PMD TIK +M+ +EYK+ E DVRL+F
Sbjct: 289 KKHFSYAWPFYNPVDVNALGLHNYYDIVKHPMDLGTIKGKMDNQEYKDAYEFAADVRLMF 348
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFE 199
N KYN +V MAK L FE
Sbjct: 349 MNCYKYNPPDHEVVTMAKMLQDVFE 373
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 37 VVLKALWKHSFSWPFQHPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+ +F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 97 LNTMFSNCYLYNKPGDDIVLMAQAL----EKLFIQKLSQMPQEEQ 137
>gi|254566451|ref|XP_002490336.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|238030132|emb|CAY68055.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|328350730|emb|CCA37130.1| Bromodomain-containing factor 1 [Komagataella pastoris CBS 7435]
Length = 640
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 162/368 (44%), Gaps = 55/368 (14%)
Query: 26 VESFTLRVDDI--FQKVDKLEERVNE-----IEQFYLNASKKQGSNSKGSSTLKDKEKER 78
VE F L VD+ F D R+ + E+ LN K ++ +S+ + + KE
Sbjct: 195 VEDFNLMVDNCRKFNGEDTPITRMAKNIQASFEKHMLNMPPKNLPDNGVASSKRKRNKE- 253
Query: 79 HVPSIRKQQQEASR--RE-------------KAAEKRMEELIRQFGTILRNITQHK---W 120
VP IR+ R RE + +K+ + +R +++ + K +
Sbjct: 254 -VPEIRRDSIRDGRPKREIHPPKPKDIPYDIRPRKKKYVQELRFCNQVMKELMSKKHQNY 312
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
++PF+QPVD L Y++++ +PMD TI+ ++ EY+N + +VRLVF N K+
Sbjct: 313 SFPFLQPVDPVALDCPTYFDIVKEPMDLGTIQAKLANSEYENADQFEREVRLVFTNCYKF 372
Query: 181 NDERSDVHVMAKTLLAKFEEKW-----LQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAH 235
N E S V+VM T+ F ++W P+V + E+E + ++D L + A
Sbjct: 373 NPEGSPVNVMGHTMENVFNKEWEKKPAPAPSPQVLSDYDSEAEDEGDIEIDESLLTNPAI 432
Query: 236 --------------AKMARDTSNELYEVDV-----HLDELREMLVQKCRKTSTEEKRKLG 276
KM R +E+ V + ++ + + E K++L
Sbjct: 433 EYLETQIERMRADVEKMKRQLYDEVMSVAIKNRKKSKRSKKKSSISYPTHITYEMKKELS 492
Query: 277 AALTRLSPEDLGKALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFV---KDALK 332
+ LS L K + I+ ++ Q + EE+ELD+D +TL +L FV + A
Sbjct: 493 EKINYLSETKLAKVISIIQETLPELQKSGQEEIELDIDQLDSATLLKLYNFVVKKEKAFS 552
Query: 333 SQGNNNNN 340
G+N N
Sbjct: 553 DSGSNTKN 560
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ I + K A PF+ PVD + LG+ YY I +PMD STI++++ Y++ I D
Sbjct: 140 IKAIKRLKDAKPFLLPVDTEKLGIPLYYNYIKRPMDLSTIERKISVSAYESPDIIVEDFN 199
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK------VTEEEKRREEEEAEAQL 225
L+ N K+N E + + MAK + A FE+ L + PK V +++R +E E +
Sbjct: 200 LMVDNCRKFNGEDTPITRMAKNIQASFEKHMLNMPPKNLPDNGVASSKRKRNKEVPEIRR 259
Query: 226 D 226
D
Sbjct: 260 D 260
>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
Length = 721
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
Length = 1559
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
QQ K EK + E ++ IL+ + K +AWPF +PVD + LGL DY+++I
Sbjct: 435 QQPPHAGVKGKEK-LSEALKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHDIIK 493
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
KPMD T+K +M+ ++YK E +DVRL+F N KYN DV MA+ L FE ++
Sbjct: 494 KPMDLGTVKTKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYA 553
Query: 204 QL 205
++
Sbjct: 554 KV 555
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I KPMD TIKK++E Y + +E D
Sbjct: 116 VLKPVWKHQFAWPFQQPVDAKKLSLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 175
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+ L F K Q+
Sbjct: 176 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 210
>gi|357149985|ref|XP_003575300.1| PREDICTED: transcription factor GTE9-like [Brachypodium distachyon]
Length = 705
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 29/266 (10%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+++Q IL+ + K++ F PVDV+ L + DY +++ PMD TIKK++++ Y +
Sbjct: 163 VLKQCEAILKKLMTQKYSHIFNVPVDVEKLNIPDYNDIVKHPMDLGTIKKKLDSGSYTSP 222
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
DVRL F NA+ YN VH MA L FE +W K E++ A A
Sbjct: 223 SSFAADVRLTFNNAITYNPRGHAVHDMAIQLNKIFESRW-----------KTVEKKLASA 271
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
D + D A +K R + + D+ ++ +R + K T EEK G L LS
Sbjct: 272 TADPHVEVDRADSK--RRKTPPVDCSDLSMECVRPTEIVKPTMT-FEEKESFGNCLASLS 328
Query: 284 --PEDLGKALEIVAQ----SNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL------ 331
PE G ++++ Q SNT E+E+D+ A S+ L LK V L
Sbjct: 329 EDPELPGYIIDLLQQCIDSSNTDHLGDG-EIEIDIHALSDDILLELKKQVGKYLQERDNQ 387
Query: 332 --KSQGNNNNNDNNKNNNNSATNNNK 355
KS+ + N N ++S+TN K
Sbjct: 388 PTKSEPSENEAVNVSGLSHSSTNPCK 413
>gi|395530391|ref|XP_003767279.1| PREDICTED: bromodomain testis-specific protein [Sarcophilus
harrisii]
Length = 840
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVDV LGL +YY+V+ PMD TIKK+M+
Sbjct: 208 KLTEQLKYCNEILKEMFAKKHVAYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMD 267
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN +V MA+TL FE ++ ++
Sbjct: 268 NQEYKDAHEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFEMQFAKI 316
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DYY +I KPMD STIKK++E K Y E D++ +F N YN D+ +MA+ L
Sbjct: 3 DYYSIIKKPMDLSTIKKRLEHKYYVKSSECIEDLKTMFANCYLYNKPGDDIVLMAQALEK 62
Query: 197 KFEEKWLQLLP 207
F +K Q+ P
Sbjct: 63 LFTQKMSQMPP 73
>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
Length = 877
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
QQ K EK + E ++ IL+ + K +AWPF +PVD + LGL DY+E+I
Sbjct: 376 QQPPHAGVKGKEK-LSEALKSCNDILKELFAKKHSPYAWPFYKPVDAELLGLHDYHEIIK 434
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
KPMD T+K +M+ ++YK E +DVRL+F N KYN DV MA+ L FE ++
Sbjct: 435 KPMDLGTVKTKMDNRQYKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYA 494
Query: 204 QL 205
++
Sbjct: 495 KV 496
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I KPMD TIKK++E Y + +E D
Sbjct: 60 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRLENSYYWSGKECIQDF 119
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+ L F K Q+
Sbjct: 120 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 154
>gi|255554567|ref|XP_002518322.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223542542|gb|EEF44082.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 634
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 68/98 (69%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
+L+++ G +L + +HK+ + F +PVDV+ + L DY+E+I KPMD T+KK++ + EY++
Sbjct: 232 QLMKKCGQMLTKLMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVKKKLGSNEYES 291
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
+ DVRL F NAMKYN + +V+ A+ L++FEE
Sbjct: 292 PIDFAADVRLTFNNAMKYNPKGHEVYTFAEQFLSRFEE 329
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ S EEK KLG L L E + + ++I+ + N + +E+ELD++A TLW L
Sbjct: 458 REMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRNGHLRQDGDEIELDIEAVDTETLWELD 517
Query: 325 FFV 327
FV
Sbjct: 518 RFV 520
>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
Length = 572
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+ E +R +I+R + K +AWPF +PVDV+ LGL DY E+I PMD TIK +ME
Sbjct: 367 KTSEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKME 426
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++YK +E +DVRL+F N KYN +V +MA+ L FE ++ ++
Sbjct: 427 NRDYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 475
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEAS--------RREKAAEKRMEELIR 106
L A+ G +G+ L +H P++ + Q R +++ +L
Sbjct: 11 LRATSGMGDGIEGAQMLG-----QHQPALPQPQATVMNNPDPPEITRPNQPKRQTNQLQY 65
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
+L+ + +H++AWPF PVDV L L DY+++I PMD TIKK++E Y N +E
Sbjct: 66 LLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQEC 125
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
D +F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 126 IQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMPQEE 168
>gi|18394534|ref|NP_564037.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|75151921|sp|Q8H1D7.1|GTE5_ARATH RecName: Full=Transcription factor GTE5, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE5; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E5;
Flags: Precursor
gi|23297757|gb|AAN13019.1| unknown protein [Arabidopsis thaliana]
gi|332191516|gb|AEE29637.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 487
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A+K ++ + ++L + +HK AW F PVD KGLGL DY+ ++ +PMD T+K ++
Sbjct: 124 GADKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKL 183
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
YK+ + DVRL F NA+ YN DV+ A+ LL FE+KW+ +
Sbjct: 184 GKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 233
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEKR+L L L + L ++I+ +SN +E+ELD+D+ +TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 325 FFV 327
FV
Sbjct: 388 RFV 390
>gi|301112310|ref|XP_002905234.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262095564|gb|EEY53616.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 2294
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 109 GTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICT 168
GT LR + +HK+ W F PVD L + +Y++++ KPMD T+KK++E YK+ E
Sbjct: 1301 GT-LRGMMEHKFGWVFNTPVDPVALNIPNYFKIVRKPMDLGTVKKKLELGIYKHTEEFAY 1359
Query: 169 DVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQL 225
DVR F+NAM+YN E DV+ +AK +LA F + +++ ++ +E E+E+ +L
Sbjct: 1360 DVRTTFQNAMQYNSEDQDVYSLAKDMLADFNSEMRKVVAEIDVDETAAREKESSCRL 1416
>gi|195457098|ref|XP_002075425.1| GK15212 [Drosophila willistoni]
gi|194171510|gb|EDW86411.1| GK15212 [Drosophila willistoni]
Length = 2114
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 97 AEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
+++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K+
Sbjct: 519 SKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKR 578
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+M+ +EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 579 KMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 630
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 79 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 135
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE 219
Y + +E D +F N YN DV VMA+TL E+ +LQ + + +EE E
Sbjct: 136 YWSAKEAILDFNTMFNNCYVYNKPGEDVVVMAQTL----EKVFLQKIESMPKEELELEPV 191
Query: 220 EAEA 223
A+
Sbjct: 192 TAKG 195
>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
Length = 559
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+ E +R +I+R + K +AWPF +PVDV+ LGL DY E+I PMD TIK +ME
Sbjct: 367 KTSEQLRYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKME 426
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++YK +E +DVRL+F N KYN +V +MA+ L FE ++ ++
Sbjct: 427 NRDYKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 475
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEAS--------RREKAAEKRMEELIR 106
L A+ G +G+ L +H P++ + Q R +++ +L
Sbjct: 11 LRATSGMGDGIEGAQMLG-----QHQPALPQPQATVMNNPDPPEITRPNQPKRQTNQLQY 65
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
+L+ + +H++AWPF PVDV L L DY+++I PMD TIKK++E Y N +E
Sbjct: 66 LLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENHYYWNAQEC 125
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
D +F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 126 IQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMPQEE 168
>gi|334321601|ref|XP_001377106.2| PREDICTED: bromodomain testis-specific protein [Monodelphis
domestica]
Length = 1066
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV LGL +YY+V+ PMD TIKK+M+ +EYK+ E DVRL+F N K
Sbjct: 292 YAWPFYKPVDVTALGLHNYYDVVKSPMDLGTIKKKMDNQEYKDAHEFAADVRLMFMNCYK 351
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+TL FE ++ ++
Sbjct: 352 YNPPDHEVVTMARTLQDVFEMQFAKI 377
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I KPMD STIKK++E K Y E D
Sbjct: 37 VVLKALWRHSFSWPFQQPVDAAKLKLPDYYSIIKKPMDLSTIKKRLEHKYYVKSSECVED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++ +F N YN D+ +MA+ L F +K Q+
Sbjct: 97 LKTMFTNCYLYNKPGDDIVLMAQALEKLFMQKMSQM 132
>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
Length = 731
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 349 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 408
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 409 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 73 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 129
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 130 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 171
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 617 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 676
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 677 ELERYVTSCLR 687
>gi|194897170|ref|XP_001978604.1| GG17589 [Drosophila erecta]
gi|190650253|gb|EDV47531.1| GG17589 [Drosophila erecta]
Length = 2024
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 473 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 532
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 533 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 581
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE 219
Y + +E D +F N YN DV VMA+TL E+ +LQ + + +EE E
Sbjct: 95 YWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTL----EKVFLQKIESMPKEELELEPV 150
Query: 220 EAEA 223
A+
Sbjct: 151 TAKG 154
>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 722
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
Length = 722
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|24640482|ref|NP_511078.2| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
gi|68067442|sp|P13709.2|FSH_DROME RecName: Full=Homeotic protein female sterile; AltName:
Full=Fragile-chorion membrane protein
gi|22831925|gb|AAF46312.3| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
Length = 2038
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 476 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 535
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 536 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE 219
Y + +E D +F N YN DV VMA+TL E+ +LQ + + +EE E
Sbjct: 95 YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTL----EKVFLQKIESMPKEELELEPV 150
Query: 220 EAEA 223
A+
Sbjct: 151 TAKG 154
>gi|195480258|ref|XP_002101200.1| GE17489 [Drosophila yakuba]
gi|194188724|gb|EDX02308.1| GE17489 [Drosophila yakuba]
Length = 2036
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 475 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 534
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 535 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 583
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE 219
Y + +E D +F N YN DV VMA+TL E+ +LQ + + +EE E
Sbjct: 95 YWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTL----EKVFLQKIESMPKEELELEPV 150
Query: 220 EAEA 223
A+
Sbjct: 151 TAKG 154
>gi|292614925|ref|XP_002662470.1| PREDICTED: bromodomain-containing protein 2 [Danio rerio]
Length = 979
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
Q + RR K +E+ ++ IL+ + K +AWPF +PVD + LGL DY+E+I
Sbjct: 260 QHQVGRRTKLSER-----LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIH 314
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+PMD STIKK+MEA+EY + + D+RL+F N KYN +V MA+ L FE ++
Sbjct: 315 QPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRF 373
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++R + +H ++WPF QPVD L L DYY +I PMD +TI+K++E Y E D
Sbjct: 40 VVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVED 99
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F EK
Sbjct: 100 FNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEK 131
>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
Length = 1373
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|449674634|ref|XP_002169264.2| PREDICTED: bromodomain-containing protein 4-like [Hydra
magnipapillata]
Length = 1019
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T++R I +H++AWPF +PVD L + DYYE+ +PMDF TIKK++E +Y +E +
Sbjct: 25 TVMRQIQRHQFAWPFAKPVDAVKLKIPDYYEITKRPMDFGTIKKKLEHNDYTCAKECIEE 84
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+LVF N YN D+ +MA+ L F+EK L ++P
Sbjct: 85 FKLVFTNCYGYNKPGEDIVIMAEVLEKFFDEK-LSMMP 121
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PV + LGL DY+++I KPMD T+K +M+ +EY + + TDVRL+F N K
Sbjct: 320 YAWPFYKPVQAEALGLHDYFDIIKKPMDLGTVKFKMDCREYSSPSDFATDVRLIFTNCYK 379
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN DV MA+ L FE K+ ++
Sbjct: 380 YNPPDHDVVKMARKLQDVFEYKFAKM 405
>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
Length = 794
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|157453|gb|AAA28540.1| 7.6 kb fsh membrane protein [Drosophila melanogaster]
Length = 2038
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 476 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 535
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 536 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE 219
Y + +E D +F N YN DV VMA+TL E+ +LQ + + +EE E
Sbjct: 95 YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTL----EKVFLQKIESMPKEELELEPV 150
Query: 220 EAEA 223
A+
Sbjct: 151 TAKG 154
>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
Length = 723
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPAPEKNSKISEQLKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|442615454|ref|NP_001259321.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
gi|440216522|gb|AGB95166.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
Length = 2046
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 476 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 535
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 536 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 7/124 (5%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEE 219
Y + +E D +F N YN DV VMA+TL E+ +LQ + + +EE E
Sbjct: 95 YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTL----EKVFLQKIESMPKEELELEPV 150
Query: 220 EAEA 223
A+
Sbjct: 151 TAKG 154
>gi|426023907|sp|F1QW93.2|BRDT_DANRE RecName: Full=Bromodomain testis-specific protein
Length = 918
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
Q + RR K +E+ ++ IL+ + K +AWPF +PVD + LGL DY+E+I
Sbjct: 260 QHQVGRRTKLSER-----LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIH 314
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+PMD STIKK+MEA+EY + + D+RL+F N KYN +V MA+ L FE ++
Sbjct: 315 QPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRF 373
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++R + +H ++WPF QPVD L L DYY +I PMD +TI+K++E Y E D
Sbjct: 40 VVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVED 99
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F EK
Sbjct: 100 FNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEK 131
>gi|9665057|gb|AAF97259.1|AC034106_2 Contains similarity to female sterile homeotic-related protein
Frg-1 from Mus musculus gb|AF045462 and contains a
bromodomain PF|00439 [Arabidopsis thaliana]
Length = 440
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A+K ++ + ++L + +HK AW F PVD KGLGL DY+ ++ +PMD T+K ++
Sbjct: 124 GADKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKL 183
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
YK+ + DVRL F NA+ YN DV+ A+ LL FE+KW+ +
Sbjct: 184 GKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 233
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEKR+L L L + L ++I+ +SN +E+ELD+D+ +TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 325 FFV 327
FV
Sbjct: 388 RFV 390
>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
Length = 721
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPAPEKNSKISEQLKCCSVILKEMFTKKHASYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
Length = 548
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
Length = 550
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
Length = 549
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
Length = 548
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
mulatta]
Length = 553
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
Length = 497
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY E+I PMD TIK +ME +EYK +E DVRL+F N K
Sbjct: 114 YAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENREYKEPQEFAADVRLMFSNCYK 173
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V +MA+ L FE ++ ++
Sbjct: 174 YNPPDHEVVIMARKLQDVFEMRFAKM 199
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTL 320
Q+CR S EEKR+L + +L E LG+ + I+ + + + +E+E+D + STL
Sbjct: 316 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSRESSLKNSNPDEIEIDFETLKPSTL 375
Query: 321 WRLKFFVKDALKSQGN 336
L+ + + QG
Sbjct: 376 RELERYQQQHPSLQGT 391
>gi|15810439|gb|AAL07107.1| unknown protein [Arabidopsis thaliana]
Length = 487
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A+K ++ + ++L + +HK AW F PVD KGLGL DY+ ++ +PMD T+K ++
Sbjct: 124 GADKGTVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKIKL 183
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
YK+ + DVRL F NA+ YN DV+ A+ LL FE+KW+ +
Sbjct: 184 GKSLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 233
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEKR+L L L + L ++I+ +SN +E+ELD+D+ +TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 325 FFV 327
FV
Sbjct: 388 RFV 390
>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
pulchellus]
Length = 852
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
QQ +S+ +K ++ E ++ +IL+ + K +AWPF +PVD + LGL DY+E+I
Sbjct: 367 QQHSSKPKKG---KLTEQMKYCNSILKELFAKKHAGYAWPFYKPVDAELLGLHDYHEIIK 423
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
PMD T+K++M+ +EYK+ E DVRL+F N KYN +V MA+ L FE ++
Sbjct: 424 HPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYA 483
Query: 204 QL 205
++
Sbjct: 484 KM 485
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 11/125 (8%)
Query: 90 ASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFS 149
ASRR++ + ++ L++ +++ + +H++AWPF QPVD L L DY+ +I PMD
Sbjct: 53 ASRRQRTTNQ-LQHLLK---VVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLG 108
Query: 150 TIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
TIKK++E Y + +E D + +F N YN DV +MA+ L F L K+
Sbjct: 109 TIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLF-------LTKI 161
Query: 210 TEEEK 214
TE K
Sbjct: 162 TEMPK 166
>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
Length = 1368
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 431
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 432 YNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
Length = 1368
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 431
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 432 YNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|195355783|ref|XP_002044367.1| GM11218 [Drosophila sechellia]
gi|194130685|gb|EDW52728.1| GM11218 [Drosophila sechellia]
Length = 1272
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 478 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 537
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 538 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 586
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
Y + +E D +F N YN DV VMA+TL F +K ++ +PK
Sbjct: 95 YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|299116970|emb|CBN75074.1| hypothetical protein Esi_0066_0081 [Ectocarpus siliculosus]
Length = 1147
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Query: 105 IRQFGTILRNI--TQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
+R+ T+L N+ + K W F +PVD GL L +Y +I +PMD T+K ++E+ EYKN
Sbjct: 698 LRRCVTVLNNLRAIRGKSEW-FNEPVDYVGLNLPEYTTIIKRPMDLGTVKSKLESGEYKN 756
Query: 163 VREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRR 216
E +VRLVF NA YN DE SDVH+ A+ LL F+ K +L P + + +R
Sbjct: 757 TVEFAHEVRLVFSNACHYNSDETSDVHIAARHLLHVFDAKMEELGPGLDDPPSKR 811
>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
Length = 1364
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 431
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 432 YNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTL 320
+KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 605 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 664
Query: 321 WRLKFFVKDALK 332
L+ +V L+
Sbjct: 665 RELERYVTSCLR 676
>gi|357166043|ref|XP_003580578.1| PREDICTED: transcription factor GTE7-like [Brachypodium distachyon]
Length = 458
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 106/250 (42%), Gaps = 22/250 (8%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + + K + F PV+V+ LGL DY+ VI PMD T++ ++ AK Y + DV
Sbjct: 131 ILARLQKDKRSIWFNAPVEVERLGLHDYHAVIKSPMDLGTVRARLAAKAYPSHDAFAADV 190
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
RL F NA++YN DVH+ A LLA FE+ + + EE KR
Sbjct: 191 RLTFSNALRYNPAGHDVHIFAGDLLASFEKMYRAAVSWFEEECKRLAPPPPMPVAAELPP 250
Query: 231 QDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKA 290
+ + + + REM S +EK L L L E +
Sbjct: 251 PPVVVPAQVKPRAARMRKPKAREPNKREM--------SLDEKNMLREGLESLPEEKMHNV 302
Query: 291 LEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKN----- 345
L+IV + N +E+ELD+D T W L FV NN N NK+
Sbjct: 303 LQIVRKRNVNPALLGDEIELDIDEMDIETQWELDRFV--------NNFNKALNKSRRAAM 354
Query: 346 -NNNSATNNN 354
N + A NN
Sbjct: 355 MNGDGAVVNN 364
>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
Length = 1230
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 431
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 432 YNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
Full=Bromodomain-containing protein GTE10; AltName:
Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
TRANSCRIPTION FACTOR GROUP E10
gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 1061
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 19/259 (7%)
Query: 81 PSIRKQQQE----ASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLD 136
P +R +Q SR + ++++ T+L + HK WPF PVD L +
Sbjct: 134 PPVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWSHKSGWPFRTPVDPVMLNIP 193
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DY+ VI PMD TI+ ++ EY + + DVRL F N++ YN + H MA+ +
Sbjct: 194 DYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISK 253
Query: 197 KFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL 256
FE W + K+ + + A L+ ++ + A + N+ ++L
Sbjct: 254 YFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVAPMRKKEAAMND--------NKL 305
Query: 257 REMLVQKCRKTSTE-EKRKLGAALTRLSPEDLGKALE--IVAQSNTGFQATAEEVELDMD 313
R V+ + T+ EK+KLG L L ED + + + QS + Q+ E+E+D++
Sbjct: 306 R---VEPAKLVMTDGEKKKLGQDLMALE-EDFPQKIADLLREQSGSDGQSGEGEIEIDIE 361
Query: 314 AQSESTLWRLKFFVKDALK 332
A S+ L+ ++ + D L+
Sbjct: 362 ALSDEILFMVRKLLDDYLR 380
>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
Length = 1362
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 97 AEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
AEK + E +R I+R + K +AWPF +PVDV+ LGL DY E+I PMD TI
Sbjct: 361 AEKDSKTSEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTI 420
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
K +ME +YKN ++ +DVRL+F N KYN +V +MA+ L FE ++ ++
Sbjct: 421 KVKMENCDYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ + +H++AWPF PVDV L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 68 TVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQD 127
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 128 FNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMPQEE 167
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 261 VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSEST 319
Q+CR S EEKR+L + +L E LG+ + I+ + + +E+E+D + ST
Sbjct: 629 TQRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPST 688
Query: 320 LWRLKFFVKDALK 332
L L+ +V L+
Sbjct: 689 LRELERYVTSCLR 701
>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
Length = 1368
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 431
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 432 YNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KCR S +EKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
Length = 1366
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 97 AEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
AEK + E +R I+R + K +AWPF +PVDV+ LGL DY E+I PMD TI
Sbjct: 361 AEKDSKTSEQLRYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTI 420
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
K +ME +YKN ++ +DVRL+F N KYN +V +MA+ L FE ++ ++
Sbjct: 421 KVKMENCDYKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ + +H++AWPF PVDV L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 68 TVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENHFYWNAQECIQD 127
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 128 FNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMPQEE 167
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 261 VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSEST 319
Q+CR S EEKR+L + +L E LG+ + I+ + + +E+E+D + ST
Sbjct: 629 TQRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPST 688
Query: 320 LWRLKFFVKDALK 332
L L+ +V L+
Sbjct: 689 LRELERYVTSCLR 701
>gi|397567839|gb|EJK45812.1| hypothetical protein THAOC_35556, partial [Thalassiosira oceanica]
Length = 1238
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 77/118 (65%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQ 154
+A E+R+ EL + IL+++ H+ W F PV+ LG+DDY+++I KPMD TI ++
Sbjct: 727 RAEERRLLELRSRCSEILKSLQNHEHGWVFATPVNPVELGIDDYFDIIKKPMDLGTIGEK 786
Query: 155 MEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
++ + Y + + DV+L F+NAMKYN+E++ VH MAK L KF+ + ++L + E+
Sbjct: 787 LDQELYHSFEDFRADVQLTFENAMKYNEEQTVVHDMAKALKKKFDLDYNKMLMSLDED 844
>gi|348511137|ref|XP_003443101.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 819
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
Q + SR+ K + + +R +L+++ K +AWPF PVD LGL DY+++I
Sbjct: 360 QPQPSRKGKLSPQ-----LRYCSGLLKDMLSKKHAAYAWPFYTPVDAAALGLHDYHDIIK 414
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
PMD STIK++M+ +EY++ ++ +DVRL+F N KYN DV MA+ L FE ++
Sbjct: 415 CPMDLSTIKRKMDCREYRDAQQFASDVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRFA 474
Query: 204 QL 205
++
Sbjct: 475 KM 476
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++++ +H +AWPF +PVD L L DY+++I +PMD TIKK++E Y++ E D
Sbjct: 81 TLMKSLWRHHFAWPFQEPVDAYKLNLPDYHKIIKQPMDMGTIKKRLENNFYRSASECIQD 140
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 141 FNTMFTNCYIYNKPTDDIVLMAQSLEKIFLQKVAQM 176
>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 1260
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 431
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 432 YNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|224473811|gb|ACN49152.1| bromodomain containing 2 [Oryzias dancena]
Length = 826
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ +R +L+ + K +AWPF +PVD LGL DY+E+I +PMD STIK++M+
Sbjct: 387 KLSPQLRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMD 446
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++EY++ ++ DVRL+F N KYN DV MA+ L FE
Sbjct: 447 SREYRDAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 489
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+++ +H +AWPF +PVD L L DY+++I PMD TIKK++E Y++ E D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 144
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 179
>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
Length = 1183
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 369 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 428
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 429 YNPPDHEVVAMARKLQDVFEMRFAKM 454
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 70 VLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDF 129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 130 NTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 603 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 662
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 663 ELERYVTSCLR 673
>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
Length = 1225
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 91 SRREKAAEK---RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDK 144
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I
Sbjct: 348 SQQHPAPEKSNNKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKH 407
Query: 145 PMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
PMD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ +
Sbjct: 408 PMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAK 467
Query: 205 L 205
+
Sbjct: 468 M 468
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 96 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 152
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 153 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 194
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 616 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 675
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 676 ELERYVTSCLR 686
>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
Length = 1225
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 370 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 429
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 430 YNPPDHEVVAMARKLQDVFEMRFAKM 455
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 604 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 663
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 664 ELERYVTSCLR 674
>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
isoform 1 [Canis lupus familiaris]
Length = 1360
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 431
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 432 YNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|393911119|gb|EJD76176.1| bromodomain containing protein [Loa loa]
Length = 1163
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+ WPF++PVDV+GL L+DYY+++ PMD TI+++++AK+Y E+ DV LV +N K
Sbjct: 378 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYATPEELRADVILVCENCYK 437
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLL--PKVTEE 212
YN +H + L FE+KW Q+ P V +E
Sbjct: 438 YNPTSDPIHQHGRALQKYFEDKWHQMPEEPAVVDE 472
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ +HK AWPFM+PVD LGL DY++VI +PMD +TI+K++ Y + ++ D
Sbjct: 122 VLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQDF 181
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+F N K+N DV +M K + + EK ++LLP
Sbjct: 182 ESIFSNCYKFNQNEDDVSLMCKNVENLYREK-MKLLP 217
>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
Length = 915
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|350597125|ref|XP_003484360.1| PREDICTED: bromodomain-containing protein 3 [Sus scrofa]
Length = 726
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 RLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPASGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|312085274|ref|XP_003144613.1| hypothetical protein LOAG_09036 [Loa loa]
Length = 1022
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+ WPF++PVDV+GL L+DYY+++ PMD TI+++++AK+Y E+ DV LV +N K
Sbjct: 237 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYATPEELRADVILVCENCYK 296
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLL--PKVTEE 212
YN +H + L FE+KW Q+ P V +E
Sbjct: 297 YNPTSDPIHQHGRALQKYFEDKWHQMPEEPAVVDE 331
>gi|412988890|emb|CCO15481.1| bromodomain-containing protein [Bathycoccus prasinos]
Length = 947
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 5/177 (2%)
Query: 54 YLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILR 113
Y N + K S S GS + ++ + R+ +EA + E +KR LI+ +L
Sbjct: 276 YANRTVKPASMSLGSDRSHKRMRDGRIIKNRRMLREA-QIEDERQKRRNVLIKSCRDVLN 334
Query: 114 NITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLV 173
++ ++K+ W F QPVD LG+ DYYE++ PMD +K++++ K+Y + D+RL+
Sbjct: 335 HVKRNKFHWIFTQPVDAVKLGIPDYYEIVKNPMDLGKVKEKLDGKKYTWPTDFADDMRLI 394
Query: 174 FKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
F N YN +D M +T+ FEE W+ K E+K +EE+ + D+++A
Sbjct: 395 FDNCALYNGTTTDAGQMGETVRGAFEEGWV----KYNVEQKMSDEEDIRTKEDIEIA 447
>gi|213983065|ref|NP_001135690.1| bromodomain containing 4 [Xenopus (Silurana) tropicalis]
gi|197245689|gb|AAI68637.1| Unknown (protein for MGC:186343) [Xenopus (Silurana) tropicalis]
Length = 1364
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVI 142
Q Q EK + + E +R I+R + K +AWPF +PVDV LGL DY E+I
Sbjct: 362 QPQPTPTAEK--DSKTSEQLRYCAGIIREMFSKKHQAYAWPFYKPVDVDALGLHDYREII 419
Query: 143 DKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
PMD TIK +M+ +YK+ +E +DVRL+F N KYN +V +MA+ L FE ++
Sbjct: 420 KHPMDLGTIKVKMDNWDYKDAKEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRY 479
Query: 203 LQL 205
++
Sbjct: 480 AKM 482
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
R A+++ +L T+L+ + +H++AWPF PVDV L L DY+++I PMD TIK
Sbjct: 54 RPSQAKRQTNQLQYLLKTVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKNPMDMGTIK 113
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
K++E Y N +E D +F N YN D+ +MA+ L E+ +LQ + ++ +E
Sbjct: 114 KRLENHYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMPQE 169
Query: 213 E 213
E
Sbjct: 170 E 170
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 261 VQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSEST 319
Q+CR S EEKR+L + +L E LG+ + I+ + + +E+E+D + ST
Sbjct: 637 TQRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPST 696
Query: 320 LWRLKFFVKDALK 332
L L+ +V L+
Sbjct: 697 LRELERYVTSCLR 709
>gi|389608036|dbj|BAM17618.1| putative RING3 protein [Oryza sativa Japonica Group]
Length = 456
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 139/332 (41%), Gaps = 53/332 (15%)
Query: 3 AMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQG 62
A P S++ A+ G +A E+ LR D + ++ ++ + I+ + K+ G
Sbjct: 49 ATRPPPSSYVALRPGA----MAHREARALR-DRLAGELGQVRALIARIDTWQQGQVKRHG 103
Query: 63 SNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAW 122
S R +P+ + + A R KR E+++ + LR + W
Sbjct: 104 S------------PRRDLPTPPAKLRAAMR------KRCEQILAK----LRKDKRSIW-- 139
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
F PV+V LGL DY+ VI PMD T++ + A Y + + DVRL F NA++YN
Sbjct: 140 -FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNP 198
Query: 183 ERSDVHVMAKTLLAKFEE------KWL-QLLPKVTEEEKRREEEEAEAQLDMQLAQDAAH 235
+VH A LLA FE+ W Q L + E A Q+ A +
Sbjct: 199 AGHEVHTFAGDLLASFEKMYKACMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGN 258
Query: 236 AKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVA 295
KM + + E + REM + EEK L L L E + L+IV
Sbjct: 259 VKMRKPKAREPNK--------REM--------TLEEKNLLRVGLESLPEEKMHNVLQIVR 302
Query: 296 QSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
+ N + E+ELD+D T W L FV
Sbjct: 303 KRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
>gi|389608049|dbj|BAM17630.1| putative RING3 protein [Oryza sativa Indica Group]
Length = 456
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 140/332 (42%), Gaps = 53/332 (15%)
Query: 3 AMDAPISNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQG 62
A P S++ A+ G +A E+ LR D + ++ ++ + I+ + K+ G
Sbjct: 49 ATRPPPSSYVALRPGA----MAHREARALR-DRLAGELGQVRALIARIDTWQQGQVKRHG 103
Query: 63 SNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAW 122
S R +P+ + + A R KR E+++ + LR + W
Sbjct: 104 S------------PRRDLPTPPAKLRAAMR------KRCEQILAK----LRKDKRSIW-- 139
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
F PV+V LGL DY+ VI PMD T++ + A Y + + DVRL F NA++YN
Sbjct: 140 -FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNP 198
Query: 183 ERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK-------RREEEEAEAQLDMQLAQDAAH 235
+VH A LLA FE+ + + +E K E A Q+ A +
Sbjct: 199 AGHEVHTFAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGN 258
Query: 236 AKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVA 295
KM + + E + REM + EEK L L L E + L+IV
Sbjct: 259 VKMRKPKAREPNK--------REM--------TLEEKNLLRVGLESLPEEKMHNVLQIVR 302
Query: 296 QSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
+ N + E+ELD+D T W L FV
Sbjct: 303 KRNGNPELVGGEIELDIDEMDVETQWELDRFV 334
>gi|224473804|gb|ACN49148.1| bromodomain containing 2 [Oryzias dancena]
Length = 610
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ +R +L+ + K +AWPF +PVD LGL DY+E+I +PMD STIK++M+
Sbjct: 387 KLSPQLRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMD 446
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++EY++ ++ DVRL+F N KYN DV MA+ L FE
Sbjct: 447 SREYRDAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 489
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+++ +H +AWPF +PVD L L DY+++I PMD TIKK++E Y++ E D
Sbjct: 85 VLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 144
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 145 NAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 179
>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
Length = 885
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
QQ +S+ +K ++ E ++ +IL+ + K +AWPF +PVD LGL DY+E+I
Sbjct: 382 QQHSSKPKKG---KLTEQMKYCNSILKELFAKKHAGYAWPFYKPVDADLLGLHDYHEIIK 438
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
PMD T+K++M+ +EYK+ E DVRL+F N KYN +V MA+ L FE ++
Sbjct: 439 HPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYA 498
Query: 204 QL 205
++
Sbjct: 499 KM 500
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +++ I +H++AWPF QPVD L L DY+ +ID PMD TIKK++E
Sbjct: 38 QLQYLLR---VVMKAIWKHQFAWPFQQPVDTVRLNLPDYHRIIDHPMDLGTIKKRLENYY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL 194
Y + E D +F N YN DV +MA+ L
Sbjct: 95 YASASECIQDFNTMFTNCYVYNKPGEDVVLMAQAL 129
>gi|116309747|emb|CAH66790.1| H0215F08.1 [Oryza sativa Indica Group]
gi|116309918|emb|CAH66952.1| B0809H07.7 [Oryza sativa Indica Group]
Length = 456
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 114/265 (43%), Gaps = 30/265 (11%)
Query: 70 TLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVD 129
T + + +RH R ++ A KR E+++ + LR + W F PV+
Sbjct: 93 TWQQGQVKRHGSPRRDLPTPPAKLRAAMRKRCEQILAK----LRKDKRSIW---FNAPVE 145
Query: 130 VKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHV 189
V LGL DY+ VI PMD T++ + A Y + + DVRL F NA++YN +VH
Sbjct: 146 VDRLGLHDYHAVIKCPMDLGTVRANLAAGRYSSHDDFAADVRLTFSNALRYNPAGHEVHT 205
Query: 190 MAKTLLAKFEEKWLQLLPKVTEEEK-------RREEEEAEAQLDMQLAQDAAHAKMARDT 242
A LLA FE+ + + +E K E A Q+ A + KM +
Sbjct: 206 FAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQVKPRAGNVKMRKPK 265
Query: 243 SNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ 302
+ E + REM + EEK L L L E + L+IV + N +
Sbjct: 266 AREPNK--------REM--------TLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPE 309
Query: 303 ATAEEVELDMDAQSESTLWRLKFFV 327
E+ELD+D T W L FV
Sbjct: 310 LVGGEIELDIDEMDVETQWELDRFV 334
>gi|80971731|gb|ABB52829.1| BRD2 [Oncorhynchus mykiss]
Length = 812
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
Q +A RR K +++ +R ++L+++ K +AWPF +PVD LGL DY+++I
Sbjct: 338 QPKAPRRAKLSQQ-----LRYCNSVLKDLLSKKHAAYAWPFYKPVDASALGLHDYHDIIK 392
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
PMD S IK++M+++EY++ ++ DVRL+F N KYN DV MA+ L FE ++
Sbjct: 393 CPMDLSNIKRRMDSREYRDSQQFSADVRLMFSNCYKYNPPDHDVVGMARKLQDVFEFRFA 452
Query: 204 QL 205
++
Sbjct: 453 KM 454
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H +AWPF +PVD L L DY+++I +PMD TIKK++E Y++ E D
Sbjct: 60 MIKSLWRHHFAWPFHEPVDAFRLNLPDYHKIIKQPMDMGTIKKRLENNYYRSASECMQDF 119
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 120 NTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQM 154
>gi|442615456|ref|NP_001259322.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
gi|440216523|gb|AGB95167.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
Length = 1105
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 471 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 530
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 531 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 579
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
Y + +E D +F N YN DV VMA+TL F +K ++ +PK
Sbjct: 95 YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|63100516|gb|AAH95028.1| Wu:fi25h02 protein, partial [Danio rerio]
Length = 600
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
Q + RR K +E+ ++ IL+ + K +AWPF +PVD + LGL DY+E+I
Sbjct: 260 QHQVGRRTKLSER-----LKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIH 314
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+PMD STIKK+MEA+EY + + D+RL+F N KYN +V MA+ L FE ++
Sbjct: 315 QPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRF 373
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++R + +H ++WPF QPVD L L DYY +I PMD +TI+K++E Y E D
Sbjct: 40 VVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVED 99
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F EK
Sbjct: 100 FNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEK 131
>gi|442615458|ref|NP_001259323.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
gi|440216524|gb|AGB95168.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
Length = 1115
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 481 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 540
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 541 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 589
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
Y + +E D +F N YN DV VMA+TL F +K ++ +PK
Sbjct: 95 YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
Length = 520
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 55/94 (58%)
Query: 109 GTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICT 168
TIL+ + H ++W F PVD L + DY+ VI PMD TIK +++ Y + E
Sbjct: 84 ATILKCLISHPYSWVFKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDKNIYYSKEEFAA 143
Query: 169 DVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAM YN +DVH+MAK L FE KW
Sbjct: 144 DVRLTFSNAMTYNPPSNDVHLMAKELNKLFERKW 177
>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
Length = 1400
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
Length = 1403
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|24640484|ref|NP_727228.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45554398|ref|NP_996368.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|45554406|ref|NP_996369.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45554416|ref|NP_996370.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|281360582|ref|NP_001162699.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
gi|157455|gb|AAA28541.1| 5.9 kb fsh membrane protein [Drosophila melanogaster]
gi|22831926|gb|AAN09226.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45446848|gb|AAS65277.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|45446849|gb|AAS65278.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45446850|gb|AAS65279.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|51092171|gb|AAT94499.1| LD26482p [Drosophila melanogaster]
gi|220945958|gb|ACL85522.1| fs(1)h-PA [synthetic construct]
gi|272506027|gb|ACZ95234.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
Length = 1110
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+
Sbjct: 476 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMD 535
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 536 NREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
Y + +E D +F N YN DV VMA+TL F +K ++ +PK
Sbjct: 95 YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
Length = 1401
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 340 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 399
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 400 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 608 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 667
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 668 ELERYVTSCLR 678
>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Mitotic chromosome-associated protein; Short=MCAP
gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
Length = 1400
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
Length = 1400
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|432888948|ref|XP_004075102.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 460
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 48/236 (20%)
Query: 101 MEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA 157
+ E ++ IL+ + K +AWPF +PVD + LGL DY+++I PMD ST+KK+M+A
Sbjct: 226 LSEQLKYCSDILKEMLSKKHSMYAWPFYKPVDAEALGLHDYHDIIKYPMDLSTVKKKMDA 285
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
+Y++ + DVRL+F N KYN + V MA+ L FE+K+ K+ EE+ +
Sbjct: 286 GDYQDAEQFSADVRLIFSNCYKYNPPQHSVVGMARKLQGVFEQKFA----KMPEEQLQTV 341
Query: 218 EEEAEAQLDMQLAQDAAH-AKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLG 276
++ L QD + KM+++ R+ T+ K+
Sbjct: 342 HQQLS-----NLTQDPFNKPKMSKEQE---------------------REPETQHKK--- 372
Query: 277 AALTRLSPEDLGKALEIV-AQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
LG+ + I+ Q + + +E+E+D + STL L+ +V+ L
Sbjct: 373 ----------LGRVVHILKTQEPSMSSSNPDEIEIDFEVLKPSTLRELERYVRSCL 418
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
+R +L +++++ +H +AWPF QPVD LGL DY+++I PMD TIKK++E
Sbjct: 73 RRTNQLKYMHNVVIKSLWRHPFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLENN 132
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
Y + E D +F N YN D+ +MA L F K + L+P+
Sbjct: 133 YYWSASECMEDFNTMFTNCYIYNKPTDDIVLMALPLEKIFLNK-VSLMPR 181
>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
africana]
Length = 965
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A +K ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPDKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 398 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWRHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
+C+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 RCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|440904692|gb|ELR55166.1| Bromodomain-containing protein 3, partial [Bos grunniens mutus]
Length = 613
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 236 RLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 295
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 296 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 344
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL-- 194
DY+++I PMD TIKK++E Y + E D +F N YN D+ +MA+ L
Sbjct: 1 DYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEK 60
Query: 195 -----LAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
+A+ ++ ++LLP + + R+ ++ Q+A
Sbjct: 61 IFLQKVAQMPQEEVELLPPAPKGKGRKPASGTQSAGSQQVA 101
>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
carolinensis]
Length = 1344
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFST 150
EK++ ++ E ++ I++ + K +AWPF +PVDV+ LGL DY ++I PMD ST
Sbjct: 345 EKSSSNKVSEQLKYCSGIIKEMFAKKHAAYAWPFYKPVDVEALGLHDYRDIIKHPMDLST 404
Query: 151 IKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
IK ++E ++Y++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 405 IKSKLENRDYRDAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 99 KRME-ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA 157
KRM +L +L+ + +H+++WPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 57 KRMTNQLQYLLKVVLKTLWKHQFSWPFQQPVDAVKLQLPDYYKIIKTPMDMGTIKKRLEN 116
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
Y N +E D +F N YN D+ +MA+ L E+ +LQ + ++T+EE
Sbjct: 117 NYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 168
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTL 320
+KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 608 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKASTL 667
Query: 321 WRLKFFVKDALK 332
L+ +V L+
Sbjct: 668 RELERYVTSCLR 679
>gi|195565677|ref|XP_002106425.1| GD16134 [Drosophila simulans]
gi|194203801|gb|EDX17377.1| GD16134 [Drosophila simulans]
Length = 1038
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 98 EKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQ 154
++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++
Sbjct: 450 QEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRK 509
Query: 155 MEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
M+ +EYK+ E DVRL+F N KYN DV M + L FE ++ +
Sbjct: 510 MDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 560
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ I +H ++WPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 45 TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
+F N YN DV VMA+TL F +K ++ +PK
Sbjct: 105 FNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
Length = 1379
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++E +EY++ +E DVRL+F N K
Sbjct: 393 YAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLETREYRDAQEFAADVRLMFSNCYK 452
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 453 YNPPDHEVVAMARKLQDVFEMRFAKM 478
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAHECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
+F N YN D+ +MA+ L F +K +L P+ TE
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISELPPEETE 170
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 627 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 686
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 687 ELERYVTSCLR 697
>gi|194211115|ref|XP_001493233.2| PREDICTED: bromodomain testis-specific protein-like isoform 2
[Equus caballus]
Length = 928
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ KPMD TIK +M+
Sbjct: 267 KVTEQLRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDVVKKPMDLGTIKGKMD 326
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N +YN +V MA+ L FE
Sbjct: 327 NQEYKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFE 369
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TI+K++E K Y E D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLQLPDYYTIIKNPMDLNTIQKRLEHKYYVKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|134105429|pdb|2OUO|A Chain A, Crystal Structure Of The Bromo Domain 2 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|340707485|pdb|2YEM|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|340707486|pdb|2YEM|B Chain B, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
Length = 130
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 8 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 67
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 68 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 127
>gi|410967748|ref|XP_003990377.1| PREDICTED: bromodomain testis-specific protein [Felis catus]
Length = 939
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 63 SNSKGSSTLKDKEKERHVP-------SIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
++ + S TL +K+ + P ++ Q+ + K+ E + E +R IL+ +
Sbjct: 226 ASGESSPTLAEKKSVKMPPMKENVLKTVLPDSQQLCKVIKSVE--VTEQLRHCSEILKEM 283
Query: 116 TQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
K +AWPF PVDV LGL +YY+++ PMD TIK +M+ +EYK+ E DVRL
Sbjct: 284 LAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDAYEFAADVRL 343
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFE 199
+F N KYN +V MA+TL FE
Sbjct: 344 MFMNCYKYNPPDHEVVTMARTLQDVFE 370
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 37 VVLKALWRHNFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYMKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++F N YN D+ +MA+ L F +K Q+
Sbjct: 97 FNIMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|395759239|pdb|2LSP|B Chain B, Solution Structures Of Brd4 Second Bromodomain With
Nf-Kb-K310ac Peptide
Length = 128
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 6 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 65
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 66 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 125
>gi|255084403|ref|XP_002508776.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226524053|gb|ACO70034.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 852
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
R + L+++ L ++ +HK+AW F +PVD L + DY+++I PMDF TIK++++ K
Sbjct: 249 RHKALMKECRECLSSVRKHKYAWAFNKPVDPIALHIPDYFDIIKNPMDFGTIKEKLDKKS 308
Query: 160 -----YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL--QLLPKVTEE 212
Y +E D+RLVF N YN SD +M TL +FE+ WL + K+ EE
Sbjct: 309 QQNGAYSGPQEFADDMRLVFDNCALYNTPDSDAGLMGSTLQQEFEKAWLAQNVDAKIAEE 368
Query: 213 EKRREEEEA--EAQLDMQLAQDA-AHAKMARDTSNELYEVDVHLDELR 257
E R +E+A + D + ++ A ++ + + +L EV L+EL+
Sbjct: 369 EAVRAQEDAVIASTSDEPVEEEVLAESQQVSEVNRQLAEVQRQLEELK 416
>gi|291398522|ref|XP_002715912.1| PREDICTED: Bromodomain testis-specific protein-like [Oryctolagus
cuniculus]
Length = 953
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK +M+
Sbjct: 265 KVTEQLRHCSEILKEMLAKKHLPYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMD 324
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+ +YK+ E DVRL+F N KYN +V MA+TL FE
Sbjct: 325 SHQYKDACEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFE 367
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKSPMDLNTIKKRLENKYYVKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+TL F +K Q+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQTLEKLFMQKLSQM 132
>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
Length = 551
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 348 SQQHPVPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 407
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 408 MDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 79 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 138
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 139 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 170
>gi|432910838|ref|XP_004078550.1| PREDICTED: bromodomain-containing protein 2-like [Oryzias latipes]
Length = 830
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
Query: 78 RHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLG 134
R + +K +A + + + + ++ +R +L+++ K +AWPF PVD LG
Sbjct: 359 RPIKPPKKDLPDAVQPQLSKKGKLSPPLRYCSGLLKDMLSKKHAAYAWPFYTPVDAAALG 418
Query: 135 LDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL 194
L DY+++I PMD STIK++M+ +EY++ ++ +DVRL+F N KYN DV MA+ L
Sbjct: 419 LHDYHDIIKCPMDLSTIKRKMDCREYRDAQQFASDVRLMFSNCYKYNPPDHDVVGMARKL 478
Query: 195 LAKFE 199
FE
Sbjct: 479 QDVFE 483
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 60/96 (62%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H++AWPF +PVD L L DYY++I +PMD TIKK++E Y++ E D
Sbjct: 95 TLMKCLWRHEFAWPFHEPVDAYRLKLPDYYKIIKQPMDMGTIKKRLENSFYRSASECIQD 154
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN + D+ +MA++L F +K Q+
Sbjct: 155 FNTMFTNCYIYNKPKDDIVLMAQSLEKIFLQKVAQM 190
>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
Length = 720
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I PMD STIK ++E
Sbjct: 349 KVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLE 408
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
A+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 409 AREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|146147391|gb|ABQ01994.1| bromodomain containing 2 [Salmo salar]
gi|148362147|gb|ABQ59670.1| BRD2 [Salmo salar]
Length = 815
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
A K + +G S K ++ +P Q + RR K ++ +R IL+ +
Sbjct: 336 TAGTKAPAGRRGVSGRPIKPPKKDLPD--SVQLQPVRRGKLGQQ-----LRYCNGILKEL 388
Query: 116 TQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
K +AWPF +PVD LGL DY+++I +PMD STIK++M+++EY++ ++ DVR+
Sbjct: 389 LSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQQFAGDVRI 448
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFE 199
++ N KYN DV MA+ L FE
Sbjct: 449 MYSNCYKYNPPDHDVVAMARKLQDVFE 475
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H +AWPF +PVD L L DY+++I +PMD TIK+++E Y++ E D
Sbjct: 88 MMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|185134173|ref|NP_001117185.1| bromodomain containing 2 [Salmo salar]
gi|148362162|gb|ABQ59684.1| BRD2 [Salmo salar]
Length = 815
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 10/147 (6%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
A K + +G S K ++ +P Q + RR K ++ +R IL+ +
Sbjct: 336 TAGTKAPAGRRGVSGRPIKPPKKDLPD--SVQLQPVRRGKLGQQ-----LRYCNGILKEL 388
Query: 116 TQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
K +AWPF +PVD LGL DY+++I +PMD STIK++M+++EY++ ++ DVR+
Sbjct: 389 LSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSREYRDAQQFAGDVRI 448
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFE 199
++ N KYN DV MA+ L FE
Sbjct: 449 MYSNCYKYNPPDHDVVAMARKLQDVFE 475
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H +AWPF +PVD L L DY+++I +PMD TIK+++E Y++ E D
Sbjct: 88 MMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
Length = 734
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 350 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 409
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 410 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 469
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 73 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 129
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 130 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 171
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 618 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 677
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 678 ELERYVTSCLR 688
>gi|296482055|tpg|DAA24170.1| TPA: bromodomain containing protein 3 [Bos taurus]
Length = 722
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 RLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPASGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGSQQVA 172
>gi|116003963|ref|NP_001070341.1| bromodomain-containing protein 3 [Bos taurus]
gi|115305162|gb|AAI23579.1| Bromodomain containing 3 [Bos taurus]
Length = 722
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 RLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPASGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGSQQVA 172
>gi|170036200|ref|XP_001845953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878751|gb|EDS42134.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 848
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVI 142
Q A++ ++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I
Sbjct: 391 QGSAAAQNPPKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDII 450
Query: 143 DKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
KPMD T+K++M+ +EYK+ E DVRL+F N KYN DV M + L FE
Sbjct: 451 KKPMDLGTVKRKMDNREYKSANEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 507
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H+++WPF QPVD K L L DY+++I +PMD T+KK++E Y +E D
Sbjct: 67 TVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTVKKRLENNYYWTSKEAIQD 126
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
++F N YN DV VMA+TL F K + L+PK
Sbjct: 127 FNIMFSNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK 164
>gi|291230216|ref|XP_002735064.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Saccoglossus kowalevskii]
Length = 597
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 6 API--SNFTAVHAGNPESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGS 63
AP+ SN + VH P+ VA+V+ R D + + E ++N +
Sbjct: 60 APVMQSN-SVVHP--PQQPVAKVKKGVKRKADTTTPTAAIIQVPPEEPVLHINEPRPAKI 116
Query: 64 NSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---W 120
++ S K K ++ +P +A++ K ++++ ++ I++ + K +
Sbjct: 117 PTRRESGRKIKPPKKDLP-------DAAQHSKGKKEKLSVQLKYCNGIIKELYSKKHSGY 169
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
AWPF +PVD LGL DY+++I PMD T+K+++E ++Y N +I DVR +F N KY
Sbjct: 170 AWPFYKPVDANLLGLHDYHDIIKYPMDLGTVKRKLETRDYTNANDIAADVRAIFTNCYKY 229
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQL 205
N DV MA+ L FE K+ ++
Sbjct: 230 NPPDHDVVAMARKLQDVFEMKFAKM 254
>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
Length = 723
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
Length = 723
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
Length = 723
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|162287117|ref|NP_001104751.1| bromodomain-containing protein 4 [Danio rerio]
gi|159507457|gb|ABW97742.1| bromodomain 4 [Danio rerio]
Length = 1444
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 99 KRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
+ +E +R I++++ K +AWPF +PVDV LGL DY+++I PMD STIK ++
Sbjct: 358 PKQQEQLRYCSGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMDLSTIKDKL 417
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
E ++Y+ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 418 ETRQYREAQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
R K +++ L++ +L+++ +H++AWPF PVD L L DYY++I PMD TIK
Sbjct: 40 RPKRQTNQLQYLLK---VVLKSLWKHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIK 96
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL 194
K++E+ Y + +E D +F N YN D+ +MA+ L
Sbjct: 97 KRLESAFYTSAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 138
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTL 320
+KC+ S EEKR+L + +L + LG+ + I+ + + +E+E+D + STL
Sbjct: 653 EKCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 712
Query: 321 WRLKFFVKDALK 332
L+ +V L+
Sbjct: 713 RELERYVSSCLR 724
>gi|308198663|pdb|3ONI|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd2
In Complex With The Inhibitor Jq1
Length = 114
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVD LGL DY+++I PMD ST+K++ME
Sbjct: 4 KLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKME 63
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++Y++ +E DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 64 NRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 112
>gi|125591685|gb|EAZ32035.1| hypothetical protein OsJ_16213 [Oryza sativa Japonica Group]
Length = 337
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 104/236 (44%), Gaps = 30/236 (12%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
KR E+++ + LR + W F PV+V LGL DY+ VI PMD T++ + A
Sbjct: 3 KRCEQILAK----LRKDKRSIW---FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAG 55
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE------KWL-QLLPKVTE 211
Y + + DVRL F NA++YN +VH A LLA FE+ W Q L +
Sbjct: 56 RYPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEP 115
Query: 212 EEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEE 271
E A +Q+ AA+ KM + + E + D+ L EE
Sbjct: 116 PMPVPPPELPPATAPVQVKPRAANVKMRKPKAREPNKRDMTL----------------EE 159
Query: 272 KRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
K L L L E + L+IV + N + E+ELD+D T W L FV
Sbjct: 160 KNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
>gi|347968595|ref|XP_312107.4| AGAP002807-PA [Anopheles gambiae str. PEST]
gi|333467931|gb|EAA07774.4| AGAP002807-PA [Anopheles gambiae str. PEST]
Length = 870
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVI 142
Q +S+ ++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I
Sbjct: 389 QGSSSSQYPPKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDII 448
Query: 143 DKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
KPMD T+K++M+ +EYK+ E DVRL+F N KYN DV M + L FE
Sbjct: 449 KKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 505
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H+++WPF QPVD K L L DY+++I +PMD TIKK++E Y +E D
Sbjct: 43 TVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKECIQD 102
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
+F N YN DV VMA+TL F K + L+PK
Sbjct: 103 FNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK 140
>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
Length = 1443
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV LGL DY+++I PMD STIK ++E ++Y++ +E DVRL+F N K
Sbjct: 375 YAWPFYKPVDVDALGLHDYHDIIKHPMDLSTIKAKLENRQYRDPQEFAADVRLMFSNCYK 434
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 435 YNPPDHEVVAMARKLQDVFEMRFAKM 460
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
R K +++ L++ +++ + +H ++WPF PVD L L DYY +I PMD TIK
Sbjct: 34 RPKRQTNQLQYLLK---VVVKALWKHHFSWPFQAPVDAIKLNLPDYYTIIHTPMDLGTIK 90
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
K++E Y N +E D +F N YN D+ +MA+ L E+ +LQ + ++ +E
Sbjct: 91 KRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKVFLQKVSEMPQE 146
Query: 213 E 213
E
Sbjct: 147 E 147
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 238 MARDTSNELYEVDVHLDELREMLV-QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQ 296
M + + L V +EL ++ +KC+ + EEKR+L + +L + LG+ + I+
Sbjct: 608 MKSNHPSSLQPVPSLEEELGSLVTGEKCKPMTYEEKRQLSLDINKLPGDKLGRVVHIIQS 667
Query: 297 SNTGFQ-ATAEEVELDMDAQSESTLWRLKFFVKDAL 331
+ + +E+E+D + STL L+ +V L
Sbjct: 668 REPSLKNSNPDEIEIDFETLKPSTLRELERYVSTCL 703
>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
Length = 566
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
anatinus]
Length = 719
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S K G + S +K +K+ VP QQ A + K +E+ ++ I++ +
Sbjct: 314 SAKLGPRRESSRPVKPPKKD--VPD--SQQHVAEKSNKISEQ-----LKYCSGIIKEMFA 364
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV+ LGL DY ++I PMD STIK ++E +EY++ +E DVRL+F
Sbjct: 365 KKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMF 424
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN +V MA+ L FE ++ ++
Sbjct: 425 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 455
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TI+K++E Y N E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIRKRLENNYYWNAHECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K +L
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEL 164
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
Length = 557
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
Length = 545
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
Length = 582
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 339 SQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD STIK ++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|170587322|ref|XP_001898426.1| Bromodomain containing protein [Brugia malayi]
gi|158594150|gb|EDP32738.1| Bromodomain containing protein [Brugia malayi]
Length = 960
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+ WPF++PVDV+GL L+DYY+++ PMD TI+++++AK+Y E+ DV LV +N K
Sbjct: 420 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQYATPEELRADVILVCENCYK 479
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +H + L FE+KW Q+
Sbjct: 480 YNPTSDPIHQHGRALQKYFEDKWRQM 505
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ +HK AWPFM+PVD LGL DY++VI +PMD +TI+K++ Y + ++
Sbjct: 122 VLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSAKDCMQVS 181
Query: 171 RLVF 174
R +F
Sbjct: 182 RPLF 185
>gi|20302741|gb|AAM18869.1|AF391288_5 unknown [Branchiostoma floridae]
Length = 664
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+E+I PMD T+KK+M+ +EYK+ +E +D+R++F N +
Sbjct: 380 YAWPFYEPVDADLLGLHDYHEIIKHPMDLGTVKKKMDTREYKSAQEFASDMRMIFSNCYR 439
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN DV MA+ L FE K+ ++
Sbjct: 440 YNPPEHDVVQMARKLQDVFEMKYAKM 465
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Query: 81 PSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ----HKWAWPFMQPVDVKGLGLD 136
PSI + + K A K+ + Q +L+ + + H +AWPF +PVD L +
Sbjct: 14 PSIMYAEGYETSESKQAPKKPGRMTNQLQYLLKVVMKAVWKHNFAWPFHEPVDWVKLNIP 73
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DY ++I PMD TIKK++E Y + +E D L+F N YN DV++MA+TL
Sbjct: 74 DYPKIIKTPMDLGTIKKRLETNYYYSAKECIQDFNLMFTNCYVYNKPGEDVYLMAQTLEK 133
Query: 197 KFEEKWLQLLPKVTE 211
F +K Q+ P+ E
Sbjct: 134 LFLQKVAQMPPEEVE 148
>gi|348686369|gb|EGZ26184.1| hypothetical protein PHYSODRAFT_483048 [Phytophthora sojae]
Length = 2258
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 74/122 (60%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L ++ IL+ + HK+ W F PVD L + +Y+++I KPMD T+KK++EA YK+
Sbjct: 1268 LKKKLEVILKGMMDHKFGWVFNTPVDPVALNIPNYFKIIRKPMDLGTVKKKLEAGIYKHT 1327
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E +VR F+NAM+YN E DV+ +AK +L+ F + ++ ++ +EK +E+
Sbjct: 1328 DEFANEVRTTFENAMQYNSEDQDVYSLAKDMLSDFNGEMRKVAAEIDVDEKAARAKESSC 1387
Query: 224 QL 225
+L
Sbjct: 1388 RL 1389
>gi|321456065|gb|EFX67182.1| hypothetical protein DAPPUDRAFT_302185 [Daphnia pulex]
Length = 754
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+++I KPMD T+K +M+ +EY++ E +DVR++F N K
Sbjct: 371 YAWPFYKPVDAGLLGLHDYHDIIKKPMDLGTVKAKMDGREYRSAAEFASDVRMIFTNCYK 430
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN DV MA+ L FE ++ ++
Sbjct: 431 YNPPDHDVVAMARKLQDVFEMRYAKI 456
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
+ I++F +++ + +H +AWPF QPVD K LGL DY+++I PMD T+KK++E Y +
Sbjct: 82 QYIQKF--VMKAVWKHSFAWPFHQPVDAKKLGLPDYFKIIKYPMDLGTVKKRLENNYYWS 139
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+E D +F N YN DV +MA+TL F K Q+
Sbjct: 140 AKECIQDFNTMFTNCYVYNKPGEDVVLMAQTLEKLFLTKVAQM 182
>gi|357627183|gb|EHJ76955.1| putative bromodomain containing 3 [Danaus plexippus]
Length = 1323
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K M+
Sbjct: 377 KLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKHNMD 436
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+ YK E DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 437 HRAYKTAAEFAADVRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 485
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
Query: 88 QEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMD 147
+EA RR+ +++ L + +++ + +HK+AWPF QPVD K L L DY+++I KPMD
Sbjct: 51 EEAPRRQGRMTNQLQFLQK---NVIKAVWKHKFAWPFHQPVDAKKLNLPDYHKIIKKPMD 107
Query: 148 FSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
TIKK++E+ Y + +E D +F N YN DV VMA+TL E+ +L +
Sbjct: 108 LGTIKKRLESNYYYSAQECIQDFNTMFTNCYVYNKPGEDVVVMAQTL----EKLFLNRIA 163
Query: 208 KVTEEEKRRE 217
++ +EEK E
Sbjct: 164 QMDKEEKEIE 173
>gi|431897072|gb|ELK06336.1| Bromodomain testis-specific protein, partial [Pteropus alecto]
Length = 931
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 275 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMD 334
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN +V MA+ L FE
Sbjct: 335 NQEYKDAYEFAADVRLMFVNCYKYNPPDHEVVAMARMLQDVFE 377
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I KPMD STIKK++E K Y E D
Sbjct: 44 VVLKALWKHSFSWPFQQPVDAMKLKLPDYYTIIKKPMDLSTIKKRLEHKYYVQASECIED 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++F N YN D+ +MA+ L F +K Q+
Sbjct: 104 FNMMFSNCYLYNKTGDDIVLMAQALEKLFRQKLSQM 139
>gi|148725667|emb|CAN87975.1| novel protein (zgc:77289) [Danio rerio]
Length = 729
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ TIL+ + K +AWPF +PVD + L L DY+E+I +PMD ST+KK+M+
Sbjct: 290 KLNDHLKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMD 349
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + DVRL+F N KYN +V MA+ L FE K+ ++
Sbjct: 350 SREYPDAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF PVD L L DY++VI PMD TIKK++E Y E D
Sbjct: 41 VVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPPPKGKARK 154
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 268 STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFF 326
S +EKR+L + RL E LG+ + I+ + + +E+E+D + STL L+ +
Sbjct: 576 SYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELERY 635
Query: 327 VKDALK 332
VK L+
Sbjct: 636 VKSCLQ 641
>gi|390466206|ref|XP_003733541.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Callithrix jacchus]
Length = 932
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 267 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 326
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ E DVRL+F N KYN +V MA+ L FE +
Sbjct: 327 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 372
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
IL+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VILKDLWKHDFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L EE ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EELFMQKLSQMPQEEQ 138
>gi|340381558|ref|XP_003389288.1| PREDICTED: bromodomain-containing protein 2-like [Amphimedon
queenslandica]
Length = 1057
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
AWPF PVDVKGLGL DY ++I +PMD +T+KK++E +EY++ + D+RL+F N KY
Sbjct: 475 AWPFYNPVDVKGLGLHDYLDIIKQPMDLTTLKKKLEDREYEDPSQFAADMRLIFTNCYKY 534
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQL 205
N DV MA+ + FE K+ ++
Sbjct: 535 NPPEHDVVKMARKVQDIFEFKFARM 559
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQ 154
K R ++ + R I +H +AWPF +PVD L + DY+ +I +PMD + IKKQ
Sbjct: 188 KGGGNRSTNQLQYLKNVHRIIWRHHYAWPFHKPVDPVALNIPDYFNIIKRPMDLTLIKKQ 247
Query: 155 MEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
++ Y + +E D + +F N YN DV M + L F++K
Sbjct: 248 LDHNGYSSAKECIQDFKTMFNNCYTYNKPTDDVVFMCQALERLFDQK 294
>gi|432882591|ref|XP_004074106.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 823
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ +R +L+ + K +AWPF +PVD LGL DY+E+I PMD STIK++M+
Sbjct: 387 KLSPQLRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMD 446
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EY+ ++ DVRL+F N KYN DV MA+ L FE
Sbjct: 447 GREYREAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 489
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H +AWPF +PVD L L DY+++I PMD TI+K++E Y++ E D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 179
>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
pulchellus]
Length = 1295
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD + LGL DY+E+I PMD T+K++M+ +EYK+ E DVRL+F N K
Sbjct: 400 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYK 459
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 460 YNPPDHEVVAMARKLQDVFEMRYAKM 485
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 90 ASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFS 149
ASRR++ + ++ L++ +++ + +H++AWPF QPVD L L DY+ +I PMD
Sbjct: 53 ASRRQRTTNQ-LQHLLK---VVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLG 108
Query: 150 TIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL 194
TIKK++E Y + +E D + +F N YN DV +MA+ L
Sbjct: 109 TIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQAL 153
>gi|18157527|dbj|BAB83842.1| RING3 [Oryzias latipes]
Length = 814
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ +R +L+ + K +AWPF +PVD LGL DY+E+I PMD STIK++M+
Sbjct: 378 KLSPQLRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMD 437
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EY+ ++ DVRL+F N KYN DV MA+ L FE
Sbjct: 438 GREYREAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 480
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H +AWPF +PVD L L DY+++I PMD TI+K++E Y++ E D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRLENNYYRSASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 179
>gi|148725668|emb|CAN87976.1| novel protein (zgc:77289) [Danio rerio]
Length = 664
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ TIL+ + K +AWPF +PVD + L L DY+E+I +PMD ST+KK+M+
Sbjct: 290 KLNDHLKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMD 349
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + DVRL+F N KYN +V MA+ L FE K+ ++
Sbjct: 350 SREYPDAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF PVD L L DY++VI PMD TIKK++E Y E D
Sbjct: 41 VVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPPPKGKARK 154
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 268 STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFF 326
S +EKR+L + RL E LG+ + I+ + + +E+E+D + STL L+ +
Sbjct: 553 SYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELERY 612
Query: 327 VKDALK 332
VK L+
Sbjct: 613 VKSCLQ 618
>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
Length = 1354
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++E +EY++ +E DVRL+F N K
Sbjct: 387 YAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMFSNCYK 446
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 447 YNPADHEVVAMARKLQDVFEMRFAKM 472
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 87 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 146
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++T+EE
Sbjct: 147 FNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 186
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTL 320
+KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 621 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 680
Query: 321 WRLKFFVKDALK 332
L+ +V L+
Sbjct: 681 RELERYVTSCLR 692
>gi|62122590|dbj|BAD93258.1| RING3 [Oryzias latipes]
Length = 814
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ +R +L+ + K +AWPF +PVD LGL DY+E+I PMD STIK++M+
Sbjct: 378 KLSPQLRYCSGVLKELLSKKHAAYAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMD 437
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EY+ ++ DVRL+F N KYN DV MA+ L FE
Sbjct: 438 GREYREAQQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 480
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H +AWPF +PVD L L DY+++I PMD TIKK++E Y++ E D
Sbjct: 84 VVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 143
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 144 FNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 179
>gi|403284014|ref|XP_003933383.1| PREDICTED: bromodomain testis-specific protein [Saimiri boliviensis
boliviensis]
Length = 1132
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 453 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 512
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ E DVRL+F N KYN +V MA+ L FE +
Sbjct: 513 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 558
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
IL+++ +H +WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 220 VILKDLWKHDLSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 279
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L EE ++Q L ++ +EE
Sbjct: 280 FNTMFSNCYLYNKPGDDIVLMAQAL----EELFMQKLSQMPQEE 319
>gi|157834826|pdb|2DVV|A Chain A, Crystal Structure Of The Second Bromodomain Of The Human
Brd2 Protein
gi|162329881|pdb|2E3K|A Chain A, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329882|pdb|2E3K|B Chain B, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329883|pdb|2E3K|C Chain C, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329884|pdb|2E3K|D Chain D, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
Length = 112
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
ME+L + IL+ + K +AWPF +PVD LGL DY+++I PMD ST+K++ME
Sbjct: 3 HMEQL-KHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKME 61
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++Y++ +E DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 62 NRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 110
>gi|338797768|ref|NP_001229739.1| bromodomain testis-specific protein isoform d [Homo sapiens]
gi|119593515|gb|EAW73109.1| bromodomain, testis-specific, isoform CRA_b [Homo sapiens]
Length = 874
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 195 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 254
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 255 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 300
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD +TIKK++E K Y E D +F N YN D+ +MA+ L E+ ++Q
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQK 56
Query: 206 LPKVTEEEK 214
L ++ +EE+
Sbjct: 57 LSQMPQEEQ 65
>gi|417404059|gb|JAA48805.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 707
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 289 KLSEHLRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 348
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 349 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 397
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQL 229
+F N YN + +A+ ++ ++LLP + + R+ A++ Q+
Sbjct: 105 FNTMFTNCYIYNKK-----------VAQMPQEEVELLPPAPKGKGRKPAAGAQSAGTQQV 153
Query: 230 A 230
A
Sbjct: 154 A 154
>gi|351702676|gb|EHB05595.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 722
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 266 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 325
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 326 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 374
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 4 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 63
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 64 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 117
>gi|21594631|gb|AAH31536.1| Bromodomain containing 3 [Mus musculus]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
>gi|165972331|ref|NP_001107045.1| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|165972333|ref|NP_075825.3| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|47115837|sp|Q8K2F0.2|BRD3_MOUSE RecName: Full=Bromodomain-containing protein 3; AltName:
Full=Bromodomain-containing FSH-like protein FSRG2
gi|74141421|dbj|BAE35988.1| unnamed protein product [Mus musculus]
gi|74195657|dbj|BAE39636.1| unnamed protein product [Mus musculus]
gi|74204674|dbj|BAE35406.1| unnamed protein product [Mus musculus]
gi|148676422|gb|EDL08369.1| bromodomain containing 3, isoform CRA_d [Mus musculus]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
>gi|417404197|gb|JAA48868.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 725
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 KLSEHLRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|262189359|gb|ACY30377.1| BRD2 [Salmo salar]
Length = 824
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + +R IL+ + K +AWPF +PVD LGL DY+++I +PMD STIK++M+
Sbjct: 377 KLSQQLRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMD 436
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++EY++ ++ DVR+++ N KYN DV MA+ L FE
Sbjct: 437 SREYRDAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFE 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H +AWPF +PVD L L DY+++I +PMD TIK+++E Y++ E D
Sbjct: 88 MMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|194225997|ref|XP_001917930.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 3
[Equus caballus]
Length = 728
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 KLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|165972335|ref|NP_001107046.1| bromodomain-containing protein 3 isoform 1 [Mus musculus]
gi|62485072|dbj|BAD91008.2| Orfx [Mus musculus]
gi|148676418|gb|EDL08365.1| bromodomain containing 3, isoform CRA_a [Mus musculus]
Length = 743
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
>gi|348574826|ref|XP_003473191.1| PREDICTED: bromodomain-containing protein 3-like [Cavia porcellus]
Length = 725
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWRHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENTYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|148362124|gb|ABQ59651.1| BRD2 [Salmo salar]
gi|148362144|gb|ABQ59668.1| BRD2 [Salmo salar]
Length = 824
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + +R IL+ + K +AWPF +PVD LGL DY+++I +PMD STIK++M+
Sbjct: 377 KLSQQLRYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMD 436
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++EY++ ++ DVR+++ N KYN DV MA+ L FE
Sbjct: 437 SREYRDAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFE 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++++ +H +AWPF +PVD L L DY+++I +PMD TIK+++E Y++ E D
Sbjct: 88 MMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNYYRSASECMQDF 147
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 148 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|148676419|gb|EDL08366.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
gi|148676420|gb|EDL08367.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
Length = 731
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 311 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 370
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 371 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 49 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 108
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 109 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 168
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 169 NAGSQQVA 176
>gi|354501565|ref|XP_003512861.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Cricetulus
griseus]
Length = 744
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 165 NAGTQQVA 172
>gi|443691011|gb|ELT92995.1| hypothetical protein CAPTEDRAFT_169335 [Capitella teleta]
Length = 1173
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 59/86 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+E+I +PMD +I++++E +EY++ E +VRL+F N +
Sbjct: 343 YAWPFYKPVDADLLGLHDYHEMIKRPMDLGSIRQKLETREYESPAEFAEEVRLIFTNCYR 402
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN SDV +MAK L FE ++ ++
Sbjct: 403 YNPPESDVVMMAKKLQDVFEMRYARM 428
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H+++WPF PVD L L DYY++I PMD TIKK++E + Y +E D
Sbjct: 54 VLKALWKHQFSWPFHTPVDAVKLNLHDYYKIIKHPMDMGTIKKRLENQYYHRAQECIQDW 113
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
+F N YN D+ VM + + +F K + P+ E
Sbjct: 114 NQMFTNCYTYNKAGEDITVMCQAVEKQFVLKLSGMPPEEVE 154
>gi|189241564|ref|XP_967957.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1321
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVD + L L DY+++I KPMD T+K++M+
Sbjct: 359 KLTEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMD 418
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY++ +E DVRL+F N KYN DV MA+ L FE K+ ++
Sbjct: 419 NREYRSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 467
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ + +H++AWPF QPVD K L L DY+++I +PMD TIKK+++ Y + +E D
Sbjct: 45 TVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL 194
+F N YN DV VMA+TL
Sbjct: 105 FNTMFTNCYVYNKPGEDVVVMAQTL 129
>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 21/265 (7%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ +Q IL+ + K + F PVD L + DY+++I KPMD TI+ ++++ Y +
Sbjct: 167 IFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSP 226
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN VH A L FE +W + EK+ EA
Sbjct: 227 SEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTI-------EKKLASIATEA 279
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+++ A D S E + +R K K + EEK G L LS
Sbjct: 280 HVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLS 338
Query: 284 --PEDLGKALEIVAQS--NTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL-------- 331
PE ++++ Q N Q E+E+D+ A S+ L+ LK V L
Sbjct: 339 EDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQEREQSQQ 398
Query: 332 -KSQGNNNNNDNNKNNNNSATNNNK 355
KS+ + N N ++S+TN K
Sbjct: 399 AKSEPSENEAANVSGLSHSSTNPCK 423
>gi|167515986|ref|XP_001742334.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778958|gb|EDQ92572.1| predicted protein [Monosiga brevicollis MX1]
Length = 497
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 80 VPSIRKQQQEASRREK----AAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKG 132
+P+ R+Q R K AA R+ +R I++++ K +AWPF +PVD+
Sbjct: 218 LPTHRRQSSRVIRAPKDGLLAASSRLPAHMRVCYDIIKDLFGKKHQAYAWPFYEPVDIVK 277
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
L + DYY+VI +PMD T++ ++E EY+ + DVRLVF N YN SDV MAK
Sbjct: 278 LNIPDYYDVIKQPMDLGTVRTKLEEGEYETRDDFAHDVRLVFANCYTYNPPGSDVVKMAK 337
Query: 193 TLLAKFEEKW 202
+ FE +W
Sbjct: 338 STSEVFELQW 347
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQF----GTI 111
+ QGS + G T PS+ R + Q I
Sbjct: 44 GTASPQGSATPGPGT----------PSVIMAPGTPDSGSAGGTPRTGRMTNQLQYISKVI 93
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L + +H AWPF +PVD K LGL Y E+I PMD TI+ ++ KEY + RE D+
Sbjct: 94 LPTLNKHPSAWPFKKPVDWKKLGLLSYPEIIANPMDLGTIRNKLRKKEYFSGRECLDDIE 153
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
LV+ N +N DV++M++ L E + Q+L + E E + A+A+
Sbjct: 154 LVWHNCQTFNRPSDDVYIMSQAL----ESDYKQMLANLPEPEVPLDRPSAKAK 202
>gi|354501563|ref|XP_003512860.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Cricetulus
griseus]
gi|344252302|gb|EGW08406.1| Bromodomain-containing protein 3 [Cricetulus griseus]
Length = 727
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 165 NAGTQQVA 172
>gi|302564433|ref|NP_001181047.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|355567354|gb|EHH23695.1| hypothetical protein EGK_07225 [Macaca mulatta]
gi|383421773|gb|AFH34100.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|384949538|gb|AFI38374.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|387542198|gb|AFJ71726.1| bromodomain-containing protein 3 [Macaca mulatta]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPSAGVQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|397503778|ref|XP_003822496.1| PREDICTED: bromodomain-containing protein 3 [Pan paniscus]
Length = 728
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|159164570|pdb|2G4A|A Chain A, Solution Structure Of A Bromodomain From Ring3 Protein
Length = 116
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 103 ELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
E ++ IL+ + K +AWPF +PVD LGL DY+++I PMD ST+K++ME ++
Sbjct: 1 EQLKHCNVILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD 60
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
Y++ +E DVRL+F N KYN DV MA+ L FE ++ ++
Sbjct: 61 YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 106
>gi|355752948|gb|EHH56994.1| hypothetical protein EGM_06545 [Macaca fascicularis]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPSAGVQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|114627431|ref|XP_001170358.1| PREDICTED: bromodomain-containing protein 3 isoform 8 [Pan
troglodytes]
gi|410223876|gb|JAA09157.1| bromodomain containing 3 [Pan troglodytes]
gi|410253994|gb|JAA14964.1| bromodomain containing 3 [Pan troglodytes]
gi|410301574|gb|JAA29387.1| bromodomain containing 3 [Pan troglodytes]
gi|410339465|gb|JAA38679.1| bromodomain containing 3 [Pan troglodytes]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|149039214|gb|EDL93434.1| bromodomain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197246453|gb|AAI68949.1| Brd3 protein [Rattus norvegicus]
Length = 742
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 158
>gi|426363503|ref|XP_004048879.1| PREDICTED: bromodomain-containing protein 3 [Gorilla gorilla
gorilla]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
Length = 114
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 60/87 (68%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N K
Sbjct: 21 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYK 80
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLL 206
YN +V MA+ L FE ++ ++L
Sbjct: 81 YNPPDHEVVAMARKLQDVFEMRFAKML 107
>gi|11067749|ref|NP_031397.1| bromodomain-containing protein 3 [Homo sapiens]
gi|12643726|sp|Q15059.1|BRD3_HUMAN RecName: Full=Bromodomain-containing protein 3; AltName:
Full=RING3-like protein
gi|46241518|gb|AAS82952.1| endothelial differentiation inhibitory protein D18 [Homo sapiens]
gi|119608519|gb|EAW88113.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|119608521|gb|EAW88115.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|168274318|dbj|BAG09579.1| bromodomain-containing protein 3 [synthetic construct]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|8575733|gb|AAF78072.1| bromodomain-containing FSH-like protein FSRG2 [Mus musculus]
gi|46241516|gb|AAS82951.1| endothelial differentiation inhibitory protein D18 [Mus musculus]
Length = 726
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
>gi|392332962|ref|XP_003752750.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
gi|149028625|gb|EDL83966.1| bromodomain, testis-specific [Rattus norvegicus]
Length = 947
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKG 132
KE V S+ Q+ R K ++ E ++ IL+ + K +AWPF PVDV
Sbjct: 245 KENTVKSVLPDSQQQHRVLKTV--KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDVDA 302
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
LGL +YY+++ PMD TIK +M+ +EYK+ E DVRL+F N KYN +V MA+
Sbjct: 303 LGLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMAR 362
Query: 193 TLLAKFE 199
L FE
Sbjct: 363 MLQDVFE 369
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I+ PMD STIKK++E + Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ VMA+ L E+ ++Q L ++ +EE+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQAL----EKLFMQKLSQMPQEEQ 137
>gi|40788944|dbj|BAA05393.2| KIAA0043 [Homo sapiens]
Length = 731
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 312 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 371
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 372 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 420
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 50 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 109
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 110 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 169
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 170 SAGTQQVA 177
>gi|392352984|ref|XP_003751370.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKG 132
KE V S+ Q+ R K ++ E ++ IL+ + K +AWPF PVDV
Sbjct: 245 KENTVKSVLPDSQQQHRVLKTV--KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDVDA 302
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
LGL +YY+++ PMD TIK +M+ +EYK+ E DVRL+F N KYN +V MA+
Sbjct: 303 LGLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMAR 362
Query: 193 TLLAKFE 199
L FE
Sbjct: 363 MLQDVFE 369
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I+ PMD STIKK++E + Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ VMA+ L E+ ++Q L ++ +EE+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQAL----EKLFMQKLSQMPQEEQ 137
>gi|47086635|ref|NP_997867.1| bromodomain-containing protein 3 [Danio rerio]
gi|41944567|gb|AAH65949.1| Bromodomain containing 3b [Danio rerio]
Length = 664
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ TIL+ + K +AWPF +PVD + L L DY+E+I +PMD ST+KK+M+
Sbjct: 290 KLNDHLKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMD 349
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE K+ ++
Sbjct: 350 SREYPDAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF PVD L L DY++VI PMD TIKK++E Y E D
Sbjct: 41 VVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPPPKGKARK 154
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 268 STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFF 326
S +EKR+L + RL E LG+ + I+ + + +E+E+D + STL L+ +
Sbjct: 553 SYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELERY 612
Query: 327 VKDALK 332
VK L+
Sbjct: 613 VKSCLQ 618
>gi|73967596|ref|XP_858014.1| PREDICTED: bromodomain-containing protein 3 isoform 3 [Canis lupus
familiaris]
Length = 728
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 KLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 158
>gi|297685659|ref|XP_002820401.1| PREDICTED: bromodomain-containing protein 3 [Pongo abelii]
Length = 726
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|332255339|ref|XP_003276790.1| PREDICTED: bromodomain-containing protein 3 [Nomascus leucogenys]
Length = 726
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 STGTQQVA 172
>gi|440906896|gb|ELR57110.1| Bromodomain testis-specific protein [Bos grunniens mutus]
Length = 964
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 96 AAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
A ++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK
Sbjct: 263 AKNAKVTEQLRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIK 322
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+M+ +EYK+ E DVRL+F N KYN +V MA+ L FE
Sbjct: 323 AKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFE 369
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|402896155|ref|XP_003911172.1| PREDICTED: bromodomain-containing protein 3 [Papio anubis]
Length = 726
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPSAGVQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|157819431|ref|NP_001102045.1| bromodomain-containing protein 3 [Rattus norvegicus]
gi|149039215|gb|EDL93435.1| bromodomain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 725
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 158
>gi|426020760|sp|D4A7T3.1|BRDT_RAT RecName: Full=Bromodomain testis-specific protein
Length = 952
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKG 132
KE V S+ Q+ R K ++ E ++ IL+ + K +AWPF PVDV
Sbjct: 245 KENTVKSVLPDSQQQHRVLKTV--KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDVDA 302
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
LGL +YY+++ PMD TIK +M+ +EYK+ E DVRL+F N KYN +V MA+
Sbjct: 303 LGLHNYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEVVTMAR 362
Query: 193 TLLAKFE 199
L FE
Sbjct: 363 MLQDVFE 369
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I+ PMD STIKK++E + Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ VMA+ L E+ ++Q L ++ +EE+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQAL----EKLFMQKLSQMPQEEQ 137
>gi|221046272|dbj|BAH14813.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 281
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 282 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 327
>gi|338797761|ref|NP_001229737.1| bromodomain testis-specific protein isoform c [Homo sapiens]
gi|338797763|ref|NP_001229736.1| bromodomain testis-specific protein isoform c [Homo sapiens]
Length = 901
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 281
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 282 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 327
>gi|221044240|dbj|BAH13797.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 281
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 282 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 327
>gi|33355659|gb|AAQ16198.1| testis-specific BRDT protein [Homo sapiens]
Length = 960
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 281 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 340
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 341 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 386
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 51 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 110
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 111 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 151
>gi|221044398|dbj|BAH13876.1| unnamed protein product [Homo sapiens]
Length = 951
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 272 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 331
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 332 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 377
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+N+ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKNLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|403301507|ref|XP_003941429.1| PREDICTED: bromodomain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 726
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP V + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 STGTQQVA 172
>gi|301770655|ref|XP_002920742.1| PREDICTED: bromodomain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 728
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 KLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP V + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRKPAAGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|46399198|ref|NP_001717.2| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|46399200|ref|NP_997072.1| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|338797755|ref|NP_001229734.1| bromodomain testis-specific protein isoform b [Homo sapiens]
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|338797757|ref|NP_001229735.1| bromodomain testis-specific protein isoform a [Homo sapiens]
Length = 951
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 272 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 331
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 332 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 377
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|119593512|gb|EAW73106.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593513|gb|EAW73107.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593514|gb|EAW73108.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593516|gb|EAW73110.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593517|gb|EAW73111.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|208965898|dbj|BAG72963.1| bromodomain, testis-specific [synthetic construct]
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|226694198|sp|Q58F21.4|BRDT_HUMAN RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Cancer/testis antigen 9; Short=CT9; AltName:
Full=RING3-like protein
gi|108752098|gb|AAI11928.1| BRDT protein [synthetic construct]
gi|110645559|gb|AAI18499.1| BRDT protein [synthetic construct]
Length = 947
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|281349316|gb|EFB24900.1| hypothetical protein PANDA_009517 [Ailuropoda melanoleuca]
Length = 696
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 307 KLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP V + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRKPAAGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|395844316|ref|XP_003794908.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 726
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 158
>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Meleagris gallopavo]
Length = 697
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S K G + S +K +K+ VP ++ E S ++ E ++ I++ +
Sbjct: 239 STKLGPRRESSRPVKPPKKD--VPDSQQHMVEKS-------SKVSEQLKYCSGIIKEMFA 289
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF +PVDV+ LGL DY ++I PMD STIK ++E +EY++ +E DVRL+F
Sbjct: 290 KKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENREYRDAQEFAADVRLMF 349
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N KYN +V MA+ L FE ++ ++
Sbjct: 350 SNCYKYNPADHEVVAMARKLQDVFEMRFAKM 380
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++T+EE
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 168
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTL 320
+KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 529 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 588
Query: 321 WRLKFFVKDALK 332
L+ +V L+
Sbjct: 589 RELERYVTSCLR 600
>gi|426218805|ref|XP_004003627.1| PREDICTED: bromodomain testis-specific protein [Ovis aries]
Length = 969
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK +M+
Sbjct: 302 KVTEQLRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMD 361
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN +V MA+ L FE
Sbjct: 362 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFE 404
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 72 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHKYYVKASECIED 131
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 132 FNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 167
>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 714
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 21/265 (7%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ +Q IL+ + K + F PVD L + DY+++I KPMD TI+ ++++ Y +
Sbjct: 167 IFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSP 226
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN VH A L FE +W + EK+ EA
Sbjct: 227 SEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTI-------EKKLASIATEA 279
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+++ A D S E + +R K K + EEK G L LS
Sbjct: 280 HVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLS 338
Query: 284 --PEDLGKALEIVAQS--NTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL-------- 331
PE ++++ Q N Q E+E+D+ A S+ L+ LK V L
Sbjct: 339 EDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQEREQSQQ 398
Query: 332 -KSQGNNNNNDNNKNNNNSATNNNK 355
KS+ + N N ++S+TN K
Sbjct: 399 AKSEPSENEAANVSGLSHSSTNPCK 423
>gi|395844318|ref|XP_003794909.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 743
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGTP 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|410033225|ref|XP_003949509.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 797
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 195 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 254
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 255 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 300
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD +TIKK++E K Y E D +F N YN D+ +MA+ L E+ ++Q
Sbjct: 1 MDLNTIKKRLENKYYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQK 56
Query: 206 LPKVTEEEK 214
L ++ +EE+
Sbjct: 57 LSQMPQEEQ 65
>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
Length = 714
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 21/265 (7%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ +Q IL+ + K + F PVD L + DY+++I KPMD TI+ ++++ Y +
Sbjct: 167 IFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSP 226
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN VH A L FE +W + EK+ EA
Sbjct: 227 SEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTI-------EKKLASIATEA 279
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+++ A D S E + +R K K + EEK G L LS
Sbjct: 280 HVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLS 338
Query: 284 --PEDLGKALEIVAQS--NTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL-------- 331
PE ++++ Q N Q E+E+D+ A S+ L+ LK V L
Sbjct: 339 EDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQEREQSQQ 398
Query: 332 -KSQGNNNNNDNNKNNNNSATNNNK 355
KS+ + N N ++S+TN K
Sbjct: 399 AKSEPSENEAANVSGLSHSSTNPCK 423
>gi|2554915|gb|AAB87862.1| BRDT [Homo sapiens]
Length = 947
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYSFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|270001347|gb|EEZ97794.1| hypothetical protein TcasGA2_TC030708 [Tribolium castaneum]
Length = 815
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVD + L L DY+++I KPMD T+K++M+
Sbjct: 352 KLTEALKSCNEILKELFSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMD 411
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY++ +E DVRL+F N KYN DV MA+ L FE K+ ++
Sbjct: 412 NREYRSAQEFAADVRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 460
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ + +H++AWPF QPVD K L L DY+++I +PMD TIKK+++ Y + +E D
Sbjct: 45 TVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRLDNNYYWSGKECIQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL 194
+F N YN DV VMA+TL
Sbjct: 105 FNTMFTNCYVYNKPGEDVVVMAQTL 129
>gi|73959570|ref|XP_867048.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Canis
lupus familiaris]
Length = 668
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK +M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHLSYAWPFYNPVDVHALGLHNYYDIVKNPMDLGTIKGKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN +V MA+ L FE
Sbjct: 328 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFE 370
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHKYYVRASECIEDF 97
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++F N YN D+ +MA+ L F +K Q+
Sbjct: 98 NIMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|120431736|ref|NP_473395.2| bromodomain testis-specific protein isoform A [Mus musculus]
gi|425906068|sp|Q91Y44.3|BRDT_MOUSE RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Bromodomain-containing female sterile homeotic-like
protein; AltName: Full=RING3-like protein
gi|148688221|gb|EDL20168.1| bromodomain, testis-specific [Mus musculus]
Length = 956
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF PVD LGL +YY+V+ PMD TIK +M+
Sbjct: 267 KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMD 326
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN +V MA+TL FE
Sbjct: 327 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFE 369
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y+ E D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ VMA+ L F +K Q+
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
>gi|13957951|gb|AAK50736.1| bromodomain-containing female sterile homeotic-like protein [Mus
musculus]
Length = 956
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF PVD LGL +YY+V+ PMD TIK +M+
Sbjct: 267 KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMD 326
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN +V MA+TL FE
Sbjct: 327 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFE 369
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y+ E D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ VMA+ L F +K Q+
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
>gi|402855238|ref|XP_003892238.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Papio
anubis]
gi|402855240|ref|XP_003892239.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Papio
anubis]
Length = 899
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 282 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 327
>gi|147826573|emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
Length = 588
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q +IL+ + H W F QPVD L + DY+ +I KPMD TIK ++E Y E
Sbjct: 73 QCTSILKXLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNXYLATEEF 132
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAM YN ++VH MAK L F +W
Sbjct: 133 AADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 168
>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
Length = 714
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 21/265 (7%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ +Q IL+ + K + F PVD L + DY+++I KPMD TI+ ++++ Y +
Sbjct: 167 IFKQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSP 226
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
E DVRL F NAM YN VH A L FE +W + EK+ EA
Sbjct: 227 SEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTI-------EKKLASIATEA 279
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+++ A D S E + +R K K + EEK G L LS
Sbjct: 280 HVEVDRADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLS 338
Query: 284 --PEDLGKALEIVAQS--NTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL-------- 331
PE ++++ Q N Q E+E+D+ A S+ L+ LK V L
Sbjct: 339 EDPEVPSHIIDLLQQCIDNNTDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQEREQSQQ 398
Query: 332 -KSQGNNNNNDNNKNNNNSATNNNK 355
KS+ + N N ++S+TN K
Sbjct: 399 AKSEPSENEAANVSGLSHSSTNPCK 423
>gi|156230233|gb|AAI51887.1| Brd3b protein [Danio rerio]
Length = 500
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
QQ +++ K + + ++ TIL+ + K +AWPF +PVD + L L DY+E+I
Sbjct: 282 QQPGNKKSK-----LNDHLKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIK 336
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
+PMD ST+KK+M+++EY + + DVRL+F N KYN +V MA+ L FE K+
Sbjct: 337 QPMDLSTVKKKMDSREYPDAQNFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFA 396
Query: 204 QL 205
++
Sbjct: 397 KM 398
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF PVD L L DY++VI PMD TIKK++E Y E D
Sbjct: 41 VVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPPPKGKARKP 155
>gi|344309215|ref|XP_003423272.1| PREDICTED: bromodomain-containing protein 3 [Loxodonta africana]
Length = 727
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 306 KLSEHLRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQSFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGTQ 163
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 164 STGTQQVA 171
>gi|116309916|emb|CAH66950.1| B0809H07.5 [Oryza sativa Indica Group]
Length = 337
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + + K + F PV+V LGL DY+ VI PMD T++ + A Y + + D+
Sbjct: 8 ILVKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADI 67
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEE------KWL-QLLPKVTEEEKRREEEEAEA 223
RL F NA++YN +VH A LLA FE+ W Q L + E A
Sbjct: 68 RLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPA 127
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+ Q+ A + KM + + E R+ + EEK L L L
Sbjct: 128 KAPAQVKPRAGNVKMRKPKARE----------------PNKREMTLEEKNLLRVGLESLP 171
Query: 284 PEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
E + L+IV + N + E+ELD+D T W+L FV
Sbjct: 172 EEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWKLDRFV 215
>gi|355745448|gb|EHH50073.1| hypothetical protein EGM_00839, partial [Macaca fascicularis]
Length = 957
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 279 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 338
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 339 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 384
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 49 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 108
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 109 FNTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQM 144
>gi|426330336|ref|XP_004026173.1| PREDICTED: bromodomain testis-specific protein [Gorilla gorilla
gorilla]
Length = 883
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVD+ LGL +YY+++ PMD TIK++M+
Sbjct: 205 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDINALGLHNYYDIVKNPMDLGTIKEKMD 264
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 265 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 310
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DYY +I PMD +TIKK++E K Y E D +F N YN D+ +MA+ L
Sbjct: 2 DYYTIIKNPMDLNTIKKRLENKYYGKASECIEDFNTMFSNCYLYNKPGDDIVLMAQAL-- 59
Query: 197 KFEEKWLQLLPKVTEEEK 214
E+ ++Q L ++ +EE+
Sbjct: 60 --EKLFMQKLSQMPQEEQ 75
>gi|431898968|gb|ELK07338.1| Bromodomain-containing protein 3 [Pteropus alecto]
Length = 756
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 337 KLSEHLRHCESILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 396
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 397 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 445
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 37/158 (23%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLD------------------------------DYY 139
+++ + +H++AWPF QPVD L L DY+
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPVSARPTPLLQLPGGAAPTLAEVLPEMWLVRDYH 104
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL----- 194
++I PMD TIKK++E Y + E D +F N YN D+ +MA+ L
Sbjct: 105 KIIKNPMDMGTIKKRLENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFL 164
Query: 195 --LAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
+A+ ++ ++LLP + + R+ ++ Q+A
Sbjct: 165 QKVAQMPQEEVELLPPAPKGKGRKPAAGTQSAGTQQVA 202
>gi|425906067|sp|Q4R8Y1.3|BRDT_MACFA RecName: Full=Bromodomain testis-specific protein
Length = 947
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQM 133
>gi|397473969|ref|XP_003808466.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
paniscus]
gi|397473971|ref|XP_003808467.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Pan
paniscus]
Length = 901
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 282 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 327
>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 873
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD + LGL DY+E+I PMD T+K++M+ +EYK+ E DVRL+F N K
Sbjct: 419 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNREYKSPEEFAGDVRLIFTNCYK 478
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 479 YNPPDHEVVAMARKLQDVFEMRYAKM 504
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 11/125 (8%)
Query: 90 ASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFS 149
ASRR++ +++ L++ +++ + +H++AWPF QPVD L L DY+ +I PMD
Sbjct: 53 ASRRQRTTN-QLQHLLK---VVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLG 108
Query: 150 TIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
TIKK++E Y + +E D + +F N YN DV +MA+ L F L K+
Sbjct: 109 TIKKRLEHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLF-------LTKI 161
Query: 210 TEEEK 214
TE K
Sbjct: 162 TEMPK 166
>gi|313212448|emb|CBY36425.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 134/322 (41%), Gaps = 57/322 (17%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
L+A+ ++ S + + +R SI A + +K M R ILR
Sbjct: 191 LSAAPQKNGQSAPTVRTRPNPPKRKTESISSFDGPAKKSSMPKKKEM----RVCAAILRE 246
Query: 115 ITQ---HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
+ Q ++AWPF PVDVKGL L DYY+VI +PMD S +K ++ Y + E D+
Sbjct: 247 LHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNIDNDMYNDKNEFIADIM 306
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV------TEE------------- 212
L+F+N YN +V MA L FE K + +EE
Sbjct: 307 LIFENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEESDFGDSDSDDERG 366
Query: 213 -------EKRREEEEAEAQL-DMQ-----------LAQDAAHAKMA--RDTSNELYEVDV 251
+K RE +E A L D+Q D K RD +Y+ D
Sbjct: 367 RKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAGKKGGNRDGEGAIYDFDS 426
Query: 252 HLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGF-QATAEEVEL 310
D +EM + +EKR+L + RL + LG+ + I+ + + +E+E+
Sbjct: 427 DEDH-KEM--------TYDEKRQLSLDINRLPSDKLGRVVTIIQNREAHYREHNPDEIEI 477
Query: 311 DMDAQSESTLWRLKFFVKDALK 332
D D +TL L +V LK
Sbjct: 478 DFDTLKTATLRELDTYVSFCLK 499
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
I + HK+AWPF +PVD L L DY+ +I PMD ST+KK++ + +Y++ ++ D
Sbjct: 20 IFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYSGQYESAKQCIADY 79
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL--LAKFEEKWLQLLPKVTEEEKRR 216
L+F+N YN D+ +M K + L + K + + V E++KR+
Sbjct: 80 DLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQKRK 127
>gi|402855232|ref|XP_003892235.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Papio
anubis]
gi|402855234|ref|XP_003892236.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Papio
anubis]
gi|402855236|ref|XP_003892237.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Papio
anubis]
Length = 945
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|345311855|ref|XP_001520339.2| PREDICTED: bromodomain testis-specific protein-like, partial
[Ornithorhynchus anatinus]
Length = 431
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVDV LGL +YY+V+ PMD TIKK+M
Sbjct: 273 KLTEQLKHCNEILKELFSKKHLSYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMN 332
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+ YK+ E DVRL+F N KYN ++ MA+TL FE ++ ++
Sbjct: 333 NQNYKDAHEFAADVRLMFMNCYKYNPPDHEIVGMARTLQDVFEMQFAKI 381
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ I +H ++WPF QPVD L L DYY +I PMD STIKK++E K Y E D
Sbjct: 36 VVIKAIWKHSFSWPFQQPVDAVKLRLPDYYRIIKNPMDLSTIKKRLEYKYYVKASECVED 95
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 96 FNTMFTNCYLYNKPGDDIVLMAQAL----EKVFLQKVAQMPQEE 135
>gi|355558166|gb|EHH14946.1| hypothetical protein EGK_00962, partial [Macaca mulatta]
Length = 897
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 275 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 334
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 335 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 380
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 45 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 105 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 145
>gi|332809506|ref|XP_003339041.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
gi|332809508|ref|XP_003308259.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
troglodytes]
Length = 824
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 282 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 327
>gi|297279234|ref|XP_001100884.2| PREDICTED: bromodomain testis-specific protein-like [Macaca
mulatta]
Length = 983
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 304 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 363
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 364 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 409
>gi|313226820|emb|CBY21965.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 134/322 (41%), Gaps = 57/322 (17%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
L+A+ ++ S + + +R SI A + +K M R ILR
Sbjct: 191 LSAAPQKNGQSAPTVRTRPNPPKRKTESISSFDGPAKKSSMPKKKEM----RVCAAILRE 246
Query: 115 ITQ---HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
+ Q ++AWPF PVDVKGL L DYY+VI +PMD S +K ++ Y + E D+
Sbjct: 247 LHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNIDNDMYNDKNEFIADIM 306
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV------TEE------------- 212
L+F+N YN +V MA L FE K + +EE
Sbjct: 307 LIFENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEESDFGDSDSDDERG 366
Query: 213 -------EKRREEEEAEAQL-DMQ-----------LAQDAAHAKMA--RDTSNELYEVDV 251
+K RE +E A L D+Q D K RD +Y+ D
Sbjct: 367 RKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAGKKGGNRDGEGAIYDFDS 426
Query: 252 HLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGF-QATAEEVEL 310
D +EM + +EKR+L + RL + LG+ + I+ + + +E+E+
Sbjct: 427 DEDH-KEM--------TYDEKRQLSLDINRLPSDKLGRVVTIIQNREAHYREHNPDEIEI 477
Query: 311 DMDAQSESTLWRLKFFVKDALK 332
D D +TL L +V LK
Sbjct: 478 DFDTLKTATLRELDTYVSFCLK 499
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
I + HK+AWPF +PVD L L DY+ +I PMD ST+KK++ +Y++ ++ D
Sbjct: 20 IFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYGGQYESAKQCIADY 79
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL--LAKFEEKWLQLLPKVTEEEKRR 216
L+F+N YN D+ +M K + L + K + + V E++KR+
Sbjct: 80 DLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQKRK 127
>gi|195060207|ref|XP_001995768.1| GH17935 [Drosophila grimshawi]
gi|193896554|gb|EDV95420.1| GH17935 [Drosophila grimshawi]
Length = 1220
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
AWPF +PVD + LGL DY+++I KPMD T+K++M+ +E+K+ E DVRL+F N KY
Sbjct: 534 AWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREFKSAPEFAADVRLIFTNCYKY 593
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQL 205
N DV M + L FE ++ +
Sbjct: 594 NPPDHDVVAMGRKLQDVFEMRYANI 618
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H ++WPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 45 TVMKFLWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWSAKEAVND 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+ +F N YN DV VMA L E+ +LQ + + +EE E A+
Sbjct: 105 INTMFTNCSVYNKPGEDVVVMAHAL----EKVYLQKIEGMPKEEVELEPVTAKG 154
>gi|343962325|dbj|BAK62750.1| bromodomain testis-specific protein [Pan troglodytes]
Length = 947
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|57282320|emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
ME ++++ +L + +HK W F PVD K +GL DY+++I +PMD T+K + Y
Sbjct: 190 MENMMKECRQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQIIKRPMDLGTVKSNLINNFY 249
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
E DVRL F NA+ YN + VH A+ LLA+FE+
Sbjct: 250 PTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 289
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ S EEK KLG L L E + + ++I+ + N +E+ELD++A TLW L
Sbjct: 417 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 476
Query: 325 FFV 327
FV
Sbjct: 477 RFV 479
>gi|397473963|ref|XP_003808463.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
paniscus]
gi|397473965|ref|XP_003808464.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
paniscus]
gi|397473967|ref|XP_003808465.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Pan
paniscus]
Length = 947
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|357144539|ref|XP_003573328.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 777
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L ++ +LRN+ +H++ F PVD L + DY++++ PMD TI+K++ + Y
Sbjct: 156 LFKKCQDLLRNLMRHRYGQTFSIPVDPVKLNIPDYFDIVKHPMDLGTIQKKLNSGSYPTP 215
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEA 221
E DVRL F NA+ YN + VH MAKT+ + FE +W K E++ R EEE
Sbjct: 216 WEFAADVRLTFSNAILYNPHNNVVHQMAKTMSSHFEPRW-----KPIEKKLPRPEEEP 268
>gi|332809502|ref|XP_524767.3| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
troglodytes]
gi|332809504|ref|XP_003308258.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
troglodytes]
gi|410033223|ref|XP_003949508.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 870
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYMKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|57282318|emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
ME ++++ +L + +HK W F PVD + LGL DY ++I +PMD T+K + Y
Sbjct: 189 MENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDLGTVKSNLSNNLY 248
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
E DVRL F NA+ YN + VHV A+ LL +FE+
Sbjct: 249 PTPFEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFED 288
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ S EEK KLG L L E + + ++I+ + N +E+ELD++A TLW L
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475
Query: 325 FFV 327
FV
Sbjct: 476 RFV 478
>gi|359483574|ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
Length = 588
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 61 QGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKW 120
G+ +G+ + D VP ++Q+ + S Q +IL+ + H
Sbjct: 45 HGTKKRGTPGITD------VPKAKRQKMDRS------------TTLQCTSILKKLMTHPA 86
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
W F QPVD L + DY+ +I KPMD TIK ++E Y E DVRL F NAM Y
Sbjct: 87 GWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEFAADVRLTFANAMLY 146
Query: 181 NDERSDVHVMAKTLLAKFEEKW 202
N ++VH MAK L F +W
Sbjct: 147 NPPSNNVHQMAKKLNDLFNTRW 168
>gi|390352946|ref|XP_003728004.1| PREDICTED: uncharacterized protein LOC100892105 [Strongylocentrotus
purpuratus]
Length = 1350
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 108 FGTI--LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
+G I L + +AWPF +PVD LGL DY+E+I PMD T+K ++E ++YKN +
Sbjct: 364 YGVIKELMSKKHSAYAWPFFKPVDADVLGLHDYHEIIKTPMDMGTVKVKLENRDYKNAND 423
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+VRL+F N KYN DV MA+ L FE K+ ++
Sbjct: 424 FAANVRLIFTNCYKYNPPDHDVVGMARKLQNVFEVKFAKM 463
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H++AWPF PVD L L DY+++I PMD TIKK++E+ Y + +E +D
Sbjct: 47 VMKALWKHQFAWPFHHPVDPTKLALLDYFKIIKTPMDLGTIKKRLESIYYHSAKECISDF 106
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKV 209
L+F N YN DV +MA+ L +A+ ++ ++L P V
Sbjct: 107 NLMFTNCYVYNKPGEDVVLMAQALEKLFLTKVAQMPQEEIELAPPV 152
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 264 CRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWR 322
+ S +EKR+L + +L + LGK + I+ + +T +E+E+D + STL
Sbjct: 663 AKPMSYDEKRQLSLDINKLPGDKLGKVVHIIQSREPSLKDSTPDEIEIDFETLKPSTLRE 722
Query: 323 LKFFVKDALKSQGNNNNNDNNKNNNNSATNNNK----RKREICDAIAKTAKKKKQK 374
L+ +V L+ + N K+ ++ K R +E+ K A KK Q+
Sbjct: 723 LEKYVMQCLRKRPKAYNKGQTKSKQDAQKEKQKELEDRLKELGGPFPKKATKKAQQ 778
>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
Length = 564
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 45 ERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRME-- 102
+R+ I L +++ S S G + K++ V + +++ E +KR +
Sbjct: 19 QRIQAIPGKKLLGAEQSCSASMGENHGSQMTKQKSVAPVSRKRGPPEMIECQQQKRQKMD 78
Query: 103 -ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
+ +Q ++L+++ H W F +PVD L + DY+ VI PMD T+K ++ Y
Sbjct: 79 RSVTQQCSSLLKSLMAHPAGWVFNKPVDPVALKIPDYFTVISNPMDLGTVKSKLGKNFYA 138
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++ E D+RL F NAM YN ++VH MA+ L FE W L
Sbjct: 139 SINEFAADIRLTFSNAMLYNPPSNNVHRMAEELNGIFETGWKAL 182
>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
Length = 1846
Score = 92.8 bits (229), Expect = 3e-16, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPV 128
+E R V +K + S++ A EK ++ E ++ IL+ + K +AWPF +PV
Sbjct: 322 RESSRPVKPPKKDVPD-SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPV 380
Query: 129 DVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVH 188
DV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N KYN +V
Sbjct: 381 DVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVV 440
Query: 189 VMAKTLLAKFEEKWLQLLPKVTEE 212
MA+ L FE ++ + +P EE
Sbjct: 441 AMARKLQDVFEMRFAK-MPDEPEE 463
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
+ K +++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIK
Sbjct: 55 KPKRQTNQLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIK 111
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
K++E Y N +E D +F N YN D+ +MA+ L F +K +L + TE
Sbjct: 112 KRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETE 170
Score = 42.0 bits (97), Expect = 0.45, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALKSQ 334
L+ +V L+ +
Sbjct: 666 ELERYVTSCLRKK 678
>gi|115475161|ref|NP_001061177.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|40253661|dbj|BAD05604.1| putative RNA-binding protein Virp1a [Oryza sativa Japonica Group]
gi|113623146|dbj|BAF23091.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|215678743|dbj|BAG95180.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765310|dbj|BAG87007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767863|dbj|BAH00092.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640052|gb|EEE68184.1| hypothetical protein OsJ_26323 [Oryza sativa Japonica Group]
Length = 481
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 96/223 (43%), Gaps = 6/223 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + + K + F PVDV+ L L DY+ +I PMD T+K+ + Y + TDV
Sbjct: 144 ILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDV 203
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
RL F NA++YN VH A LLA FE + + L +E +R E A
Sbjct: 204 RLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQP 263
Query: 231 QDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKA 290
+ E + R+ S EEK KL + L E +G
Sbjct: 264 PVPMPMQAPPRIGGGGRRPKPKAREPNK------REMSDEEKHKLRVEIGNLPEEKMGNV 317
Query: 291 LEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKS 333
L+IV + NT E VELD D TLW L FV + K+
Sbjct: 318 LQIVQKRNTDPALMGEVVELDFDEMDVETLWELDRFVVNCKKA 360
>gi|33416361|gb|AAH55533.1| Brd3b protein [Danio rerio]
Length = 499
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
Query: 87 QQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVID 143
QQ +++ K + + ++ TIL+ + K +AWPF +PVD + L L DY+E+I
Sbjct: 282 QQPGNKKSK-----LNDHLKYCDTILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIK 336
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
+PMD ST+KK+M+++EY + + D+RL+F N KYN +V MA+ L FE K+
Sbjct: 337 QPMDLSTVKKKMDSREYPDAQNFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFA 396
Query: 204 QL 205
++
Sbjct: 397 KM 398
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF PVD L L DY++VI PMD TIKK++E Y E D
Sbjct: 41 VVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPPPKGKARKP 155
>gi|297740594|emb|CBI30776.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 53/96 (55%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q +IL+ + H W F QPVD L + DY+ +I KPMD TIK ++E Y E
Sbjct: 58 QCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNMYLATEEF 117
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAM YN ++VH MAK L F +W
Sbjct: 118 AADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 153
>gi|410919159|ref|XP_003973052.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 590
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNIT---QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ ++ +L+ + + AWPF PVDV LGL DY+++I +PMD STI+K+M+
Sbjct: 267 RLSAALKCCSGVLKEMLSKRHYACAWPFYSPVDVVALGLHDYHDIIKQPMDLSTIRKKMD 326
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
EY E DVRL+F N KYN +V MA+ L FE +++++
Sbjct: 327 QGEYAQPAEFAADVRLMFSNCYKYNPPSHEVVHMARKLQEVFEARYVKV 375
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H ++WPF +PVD LGL DYY VI PMD STI +++ K Y E D
Sbjct: 61 VVIKALWRHHFSWPFQRPVDAVALGLPDYYTVITNPMDLSTIMMRLKNKYYWQALECIQD 120
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
+ +F N YN + MA+TL +EK L L+PK E K R+ E
Sbjct: 121 LNTMFSNCYVYNQPGDGIVFMAQTLEKLCQEK-LTLMPKPECEAKGRKMSE 170
>gi|21594670|gb|AAH32124.1| BRD3 protein [Homo sapiens]
gi|119608520|gb|EAW88114.1| bromodomain containing 3, isoform CRA_b [Homo sapiens]
Length = 556
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
Length = 120
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 96 AAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
A ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I PMD STIK
Sbjct: 2 AMGSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIK 61
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++E++EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 62 SKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 114
>gi|57282316|emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
ME ++++ +L + +HK W F PVD + LGL DY+++I +PMD T+K + Y
Sbjct: 189 MENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPMDLGTVKSNLSNCFY 248
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
E DVRL F NA+ YN + VH A+ LLA+FE+
Sbjct: 249 PTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 288
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ S EEK KLG L L E + + ++I+ + N +E+ELD++A TLW L
Sbjct: 414 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 473
Query: 325 FFV 327
FV
Sbjct: 474 RFV 476
>gi|116283260|gb|AAH05281.1| BRDT protein [Homo sapiens]
Length = 465
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I MD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNSMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|26332152|dbj|BAC29806.1| unnamed protein product [Mus musculus]
Length = 511
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
>gi|116283313|gb|AAH04832.1| Brd3 protein [Mus musculus]
Length = 501
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
>gi|28839607|gb|AAH47900.1| BRDT protein, partial [Homo sapiens]
Length = 463
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|38541875|gb|AAH62700.1| BRDT protein, partial [Homo sapiens]
Length = 464
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TI K++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIIKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|388581469|gb|EIM21777.1| Bromodomain-containing protein [Wallemia sebi CBS 633.66]
Length = 596
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 32/302 (10%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKA---AEKRMEELIRQFGTIL 112
+ S+ +G+ + T + + +E H P++ + S+R K + +R IL
Sbjct: 201 STSRGRGAPRRSQETGRPR-REVHHPAMTQNDPNRSKRRKTTAYGRNGTADQMRHCAYIL 259
Query: 113 RNI---TQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+ + +A PF PVD LGL DY +V+ +PMD ST+ +++ +Y+ + D
Sbjct: 260 KELHKKVHSSYASPFYDPVDYIALGLPDYPQVVQQPMDLSTVGQKLNLGDYEGPSDFFGD 319
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP-----KVTEEEKRREEEEAEAQ 224
++L+F N KYN + VH + A F+EKW QL P +++++E + + Q
Sbjct: 320 MKLMFGNCYKYNPPGTPVHEAGRQTEAVFDEKWTQLPPLSTPLEISDDENSDAVKALQRQ 379
Query: 225 L-DMQLA----QDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEE-------- 271
+ DMQ + + R ++ V + R+ S +E
Sbjct: 380 IEDMQKSLTDIKKKGTGAPERVSTGGGGSGRGGKRGSTGGQVGRPRRKSYDEDDENYQIP 439
Query: 272 ------KRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKF 325
K++L + +L + L KA++I+ ++ ++E+ELD+D TL +L
Sbjct: 440 EITFDMKKELAGKIQQLEGDQLDKAIKIIYET-LDLDNNSDEIELDIDVLPVKTLQKLYM 498
Query: 326 FV 327
FV
Sbjct: 499 FV 500
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFST----IKKQMEAKE--YKNV 163
++++ + + K A PF+ PVD +G+ Y EVI +P D T ++K ++A+E Y N
Sbjct: 90 SLVKQLKKMKAAVPFLSPVDYISMGIPHYPEVISEPSDLGTVDRKVQKTIKAEEGGYYNF 149
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVT 210
+ TDVR +F+N +N V M K + F +K L+ +P T
Sbjct: 150 NDWETDVRRIFRNTEWFNGHEHPVSKMGKQVEESF-DKQLKKMPPST 195
>gi|366999172|ref|XP_003684322.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
gi|357522618|emb|CCE61888.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
Length = 690
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 67/333 (20%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFST 150
EK K++++ +R I++ +T K+A +PF++PVD + + Y++ + PMD ST
Sbjct: 314 EKPKSKKLQQAMRFCQGIVKELTSKKYASFNYPFLEPVDPVAMNIPTYFDYVKDPMDLST 373
Query: 151 IKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV- 209
+ K++ EYK++ E +DV+LVF N +N + + V++M L F KW+ P
Sbjct: 374 VTKKLNNWEYKSLEEFESDVKLVFHNCYAFNPDGTIVNMMGHRLEEIFNAKWVD-RPIFE 432
Query: 210 ---TEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTS-----NELYEVDVHLDELREMLV 261
T+EE REE A D + ++ + + +L + V L +L++ +
Sbjct: 433 DYDTDEEIEREEYSASDVEDSEESESEIDESSITNPAIQYIEEQLARMKVELQQLKKQEL 492
Query: 262 QKCRK------------------------------------TSTEEKRKLGAALTRLSPE 285
K RK + E K+ + + LSP
Sbjct: 493 DKIRKERRLARGTKKPRGKRGRNKSRGSSGSRSGKKKFKTVVTYEMKKIITEKINDLSPS 552
Query: 286 DLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRL--KFF-VKDALKSQGNNNNNDN 342
L KA+ I+ +S +EVELD+D S STL L FF V D
Sbjct: 553 KLEKAVNIIKKSMPDL-GEDDEVELDLDTLSNSTLLTLYNTFFRVYDT------------ 599
Query: 343 NKNNNNSATNNNKRKREICDAIAKTAKKKKQKA 375
NN SA N + + +KKK+ KA
Sbjct: 600 --TNNGSARNAVGSPMSPSNGLGGHSKKKRSKA 630
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + + K A PF+ PVD L + YY I +PMD TI+K++ Y + +I D
Sbjct: 169 IKAVKRLKDAKPFLLPVDPVALNIPHYYNKIQRPMDLMTIEKKLTVDAYDSPEKITEDFN 228
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE----EKRREEEEA 221
L+ +N + +N S + MA+ + A +E+ L + K +E KR+++E+A
Sbjct: 229 LMVQNCIVFNGPTSGIAQMARNIQAAYEKHMLNMPSKDSEPLKQTRKRKQDEDA 282
>gi|62020593|gb|AAH17582.1| BRDT protein, partial [Homo sapiens]
Length = 462
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+V+ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|47216871|emb|CAG11678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 834
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ +R +L+ + K +AWPF +PVD LGL DY+++I +PMD STIK++M+
Sbjct: 400 KLSPQLRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMD 459
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EY + ++ DVRL+F N KYN DV MA+ L FE
Sbjct: 460 NREYLDSQQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 502
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+++ +H +AWPF +PVD L L DY+++I PMD TIKK++E Y++ E D
Sbjct: 59 LLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQDF 118
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 119 NTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 153
>gi|26345416|dbj|BAC36359.1| unnamed protein product [Mus musculus]
Length = 505
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 365
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
>gi|410926019|ref|XP_003976476.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 820
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ +R +L+ + K +AWPF +PVD LGL DY+++I +PMD STIK++M+
Sbjct: 386 KLSPQLRYCNGVLKELLSKKHAGYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMD 445
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EY + ++ DVRL+F N KYN DV MA+ L FE
Sbjct: 446 NREYLDSQQFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 488
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H +AWPF +PVD L L DY+++I PMD TIKK++E Y++ E D
Sbjct: 87 VLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLENNYYRSASECMQD 146
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 147 FNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|125591682|gb|EAZ32032.1| hypothetical protein OsJ_16210 [Oryza sativa Japonica Group]
Length = 515
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + + K + F PV+V LGL DY+ VI PMD T++ + A Y + + D+
Sbjct: 8 ILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADI 67
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEE------KWL-QLLPKVTEEEKRREEEEAEA 223
RL F NA++YN +VH A LLA FE+ W Q L + E A
Sbjct: 68 RLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPA 127
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+ Q+ A + KM + + E R+ + EEK L L L
Sbjct: 128 KAPAQVKPRAGNVKMRKTKARE----------------PNKREMTLEEKNLLRVGLESLP 171
Query: 284 PEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
E + L+IV + N + E+ELD+D T W L FV
Sbjct: 172 EEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
Length = 1416
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+++I PMD STIK ++E ++Y+ +E DVRL+F N K
Sbjct: 389 YAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKAKLENRQYREPQEFAADVRLMFSNCYK 448
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 449 YNPPDHEVVAMARKLQDVFEMRFAKM 474
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF PVD L L DYY +I PMD TIKK++E Y N +E D
Sbjct: 57 VLKTLWKHQFAWPFQAPVDAVKLNLPDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQDF 116
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
+F N YN D+ +MA+ L E+ +LQ KVTE
Sbjct: 117 NTMFTNCYIYNKPGDDIVLMAEAL----EKVFLQ---KVTE 150
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 264 CRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWR 322
C+ + EEKR+L + +L + LG+ + I+ + + +E+E+D + STL
Sbjct: 650 CKPMTYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLKPSTLRE 709
Query: 323 LKFFVKDAL 331
L+ +V L
Sbjct: 710 LERYVSSCL 718
>gi|183396808|ref|NP_001116861.1| bromodomain containing 3a [Danio rerio]
Length = 683
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E ++ IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 291 RLSEQLKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 350
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 351 SREYQDAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I PMD TIKK++E+ Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQEEVELLPPAPKGKGRK 154
>gi|38344163|emb|CAE03494.2| OSJNBa0053K19.2 [Oryza sativa Japonica Group]
gi|38345711|emb|CAD41833.2| OSJNBb0085C12.13 [Oryza sativa Japonica Group]
Length = 299
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 99/224 (44%), Gaps = 23/224 (10%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + + K + F PV+V LGL DY+ VI PMD T++ + A Y + + D+
Sbjct: 8 ILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADI 67
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEE------KWL-QLLPKVTEEEKRREEEEAEA 223
RL F NA++YN +VH A LLA FE+ W Q L + E A
Sbjct: 68 RLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPA 127
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+ Q+ A + KM + + E + REM + EEK L L L
Sbjct: 128 KAPAQVKPRAGNVKMRKTKAREPNK--------REM--------TLEEKNLLRVGLESLP 171
Query: 284 PEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
E + L+IV + N + E+ELD+D T W L FV
Sbjct: 172 EEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
Length = 1161
Score = 92.0 bits (227), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPV 128
+E R V +K + S++ A EK ++ E ++ IL+ + K +AWPF +PV
Sbjct: 322 RESSRPVKPPKKDVPD-SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPV 380
Query: 129 DVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVH 188
DV+ LGL DY ++I PMD STIK ++EA+EY++ +E DVRL+F N KYN +V
Sbjct: 381 DVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVV 440
Query: 189 VMAKTLLAKFEEKWLQLLPKVTEE 212
MA+ L FE ++ + +P EE
Sbjct: 441 AMARKLQDVFEMRFAK-MPDEPEE 463
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
+ K +++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIK
Sbjct: 55 KPKRQTNQLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIK 111
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
K++E Y N +E D +F N YN D+ +MA+ L F +K +L + TE
Sbjct: 112 KRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETE 170
>gi|326426578|gb|EGD72148.1| CBP-A protein [Salpingoeca sp. ATCC 50818]
Length = 2186
Score = 92.0 bits (227), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 9/119 (7%)
Query: 86 QQQEASRREKAAEKRM---------EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLD 136
Q+ +ASR + ++ EEL+ F + I H+ + PF++PVD L
Sbjct: 956 QKAQASRTPTGSAHKLVPKPKKWDREELLHHFWPLHEKIRSHEDSHPFLEPVDTVALNCS 1015
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DYY++I +PMD TI K+++A +YK+ E C D+RL+F+NA YN E+S V MAKTL
Sbjct: 1016 DYYDIIKQPMDLGTIGKKLKAGDYKDPWEYCDDMRLMFRNAFTYNGEKSIVGKMAKTLF 1074
>gi|67967916|dbj|BAE00440.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARRLQDVFETHF 373
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYVKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|384499194|gb|EIE89685.1| hypothetical protein RO3G_14396 [Rhizopus delemar RA 99-880]
Length = 446
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 67/111 (60%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
I+ G I+RN+ +H+ A PF+QPVD L + DY ++I PMD +T+ K++ + +Y +V
Sbjct: 6 IKYCGAIMRNLKKHRDATPFLQPVDYIQLNIPDYPKIIHHPMDLATVDKKLNSGQYSSVD 65
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR 215
+ DVRLVF N K+N + + ++ + + + FE+ Q+ P T E R
Sbjct: 66 QWICDVRLVFNNCFKFNGPEATISMLCQNVESAFEKSLRQMPPSKTSEPSR 116
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 9/159 (5%)
Query: 56 NASKKQGSNSKGSSTL--KDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILR 113
+A KKQ +NSK + L +D +R + K+ E R + + ++ + L+
Sbjct: 128 SAKKKQKTNSKETFALISEDIRPKRKAQAPTKEYPEIKRNPRKNDAQL----KFCAQALK 183
Query: 114 NITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+ + K+ +PF+ PVDV L + DY ++I PMD STI+K++ EY ++ D+
Sbjct: 184 ELKKSKYRDINYPFLHPVDVVALNIPDYVDIIKHPMDLSTIEKKLNDGEYVEPKDFEEDI 243
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
+L+F N YN +H M + L F+EKW Q PK
Sbjct: 244 KLMFNNCYLYNPPSLPIHKMGRQLEKVFDEKWAQKPPKT 282
>gi|441637323|ref|XP_004090057.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 872
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 195 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 254
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EY++ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 255 NQEYEDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 300
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD +TIKK++E K Y E D +F N YN D+ +MA+ L E+ ++Q
Sbjct: 1 MDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQK 56
Query: 206 LPKVTEEEK 214
L ++ +EE+
Sbjct: 57 LSQMPQEEQ 65
>gi|156914867|gb|AAI52645.1| Brd3b protein [Danio rerio]
gi|163916192|gb|AAI57602.1| LOC100135304 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 110 TILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
TIL+ + K +AWPF +PVD + L L DY+E+I +PMD ST+KK+M+++EY + +
Sbjct: 300 TILKEMLSKKHAAYAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSREYPDAQNF 359
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
D+RL+F N KYN +V MA+ L FE K+ ++
Sbjct: 360 AADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF PVD L L DY++VI PMD TIKK++E Y E D
Sbjct: 41 VVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRLENNYYWTAGECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPPPKGKARKP 155
>gi|380792435|gb|AFE68093.1| bromodomain-containing protein 3, partial [Macaca mulatta]
Length = 508
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 367 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPSAGVQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
distachyon]
Length = 574
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ +L + H W F +PVD G+ DY++VI PMD T+KK++ K Y + E
Sbjct: 64 RQCKNVLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNKNYPSTDE 123
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRL F NAMKYN + VH +A+ L F+ +W
Sbjct: 124 FAADVRLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEW 160
>gi|156356469|ref|XP_001623945.1| predicted protein [Nematostella vectensis]
gi|156210690|gb|EDO31845.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRN 114
L SK ++ ST K+ R +P E + +K + E ++ TIL++
Sbjct: 244 LPTSKPAKVPARRESTRTVKKPNRDLP-------EGPSLSRGKKKPLTEQLKYCSTILKD 296
Query: 115 I---TQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
+ + +AWPF +PVD + LGL DY+++I +PMD + IK ++E + Y + E D+R
Sbjct: 297 MFSKKHYAYAWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENRAYDSPSEFAADIR 356
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L+F N +YN DV MA+ L FE K+ ++
Sbjct: 357 LMFSNCYRYNPPDHDVVKMARQLQDVFEMKFAKM 390
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ + +H AWPF +PVD L L DY+ +I KPMD TIKK++E EY +E D
Sbjct: 25 TVLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENNEYPCAQECIED 84
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
RL+ N YN D+ +M +++ F +K + P
Sbjct: 85 FRLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMMPP 122
>gi|296191127|ref|XP_002743521.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 1364
Score = 91.7 bits (226), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
Query: 78 RHVPSIRKQQQEASRREKAAEK-RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGL 133
R + +K ++ + A +K ++ E +R +ILR + K +AWPF +PVD + L
Sbjct: 925 RPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEAL 984
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
L DY+++I PMD ST+K++M+ +EY + + DVRL+F N KYN +V MA+
Sbjct: 985 ELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARK 1044
Query: 194 LLAKFEEKWLQL 205
L FE ++ ++
Sbjct: 1045 LQDVFEMRFAKM 1056
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
++ +L +++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E
Sbjct: 675 RKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENN 734
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTE 211
Y + E D +F N YN D+ +MA+ L +A+ ++ ++LLP +
Sbjct: 735 YYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPK 794
Query: 212 EEKRREEEEAEAQLDMQLA 230
+ R+ A++ Q+A
Sbjct: 795 GKGRKPAAGAQSTGTQQVA 813
Score = 39.7 bits (91), Expect = 2.5, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 268 STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFF 326
S +EKR+L + RL E LG+ + I+ + + +E+E+D + +TL L+ +
Sbjct: 1211 SYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELERY 1270
Query: 327 VKDALKSQGNNNNNDNNKNNNNSATNNNKRKREICDAIAKTAKKKKQKASA 377
VK L+ + + + K K K E+ K +K+ Q S
Sbjct: 1271 VKSCLQKKQRKPFSASGKK------QAAKSKEELAQEKKKELEKRLQDVSG 1315
>gi|157126758|ref|XP_001654739.1| hypothetical protein AaeL_AAEL002090 [Aedes aegypti]
gi|108882525|gb|EAT46750.1| AAEL002090-PA, partial [Aedes aegypti]
Length = 506
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 105 IRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
+R IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K++M+ +EYK
Sbjct: 322 MRSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNREYK 381
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+ E DVRL+F N KYN DV M + L FE
Sbjct: 382 SANEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 419
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H+++WPF QPVD K L L DY+++I +PMD TIKK++E Y +E D
Sbjct: 23 TVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKESIQD 82
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
++F N YN DV VMA+ L F K + L+PK
Sbjct: 83 FNIMFSNCYVYNKPGEDVVVMAQALEKLFLTK-VSLMPK 120
>gi|390352956|ref|XP_003728006.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD GL DY+E+I PMD TIK ++E ++YKN + DVRL+F+N K
Sbjct: 440 YAWPFFKPVDADVFGLHDYHEIIKTPMDMGTIKVKLENRDYKNANDFAADVRLIFRNCYK 499
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +DV MA+ L FE K+ ++
Sbjct: 500 YNPRDNDVVKMARKLENVFEVKFAKI 525
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF PVD L L DYY++I PMD TIKK++E+ Y + +E +D
Sbjct: 208 VVLKALWKHQFAWPFHHPVDPTKLALPDYYKIIKTPMDLGTIKKRLESIYYHSAKECISD 267
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKV 209
+LVF N ++ DV +MA+ L +A+ ++ ++L P V
Sbjct: 268 FKLVFTNCYLHDKPGEDVVLMAQALEKLFLTKVAQMPQEEIELAPPV 314
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL-- 194
DY ++I PMD TIKK++E+ Y + +E +D LVF N +N DV MA+ L
Sbjct: 1 DYLKIIKTPMDLGTIKKRLESIYYHSAKECISDFNLVFTNCYLHNKPGEDVVFMAQALEK 60
Query: 195 -----LAKFEEKWLQLLPKV 209
+A+ ++ ++L P V
Sbjct: 61 LFLTKVAQMPQEEIELAPPV 80
>gi|10441758|gb|AAG17179.1|AF191032_1 RING3, partial [Myxine glutinosa]
Length = 732
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPV 128
+E R V + RK+ ++ +++ +M + +R TIL+ I K +AWPF + V
Sbjct: 377 RESSRPVKAPRKEVPDSPALPPVSKRVRQMSDQLRHCQTILKEIFTKKHAAYAWPFYKAV 436
Query: 129 DVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVH 188
D LGL DY+++I PMD +TIK++ E +EY N+ E D+RL+F N KYN +V
Sbjct: 437 DAFALGLHDYHDIIKIPMDLTTIKEKFERREYTNLHEFADDMRLMFSNCYKYNPPDHEVV 496
Query: 189 VMAKTLLAKFEEKW 202
MA+ L FE ++
Sbjct: 497 AMARKLQDVFEMRF 510
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF PVD L L DYY++I P+D TIKK++E+ Y E D
Sbjct: 41 VVMKVLWKHQFAWPFHHPVDAAKLNLPDYYQIIKNPLDMLTIKKRLESNYYWTAVECIQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+T+ F +K
Sbjct: 101 FSTMFTNCYIYNRPNDDIVLMAQTVEKAFLQK 132
>gi|148676421|gb|EDL08368.1| bromodomain containing 3, isoform CRA_c [Mus musculus]
Length = 516
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 311 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 370
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 371 SREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 49 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 108
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 109 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 168
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 169 NAGSQQVA 176
>gi|332221880|ref|XP_003260091.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Nomascus
leucogenys]
gi|441637320|ref|XP_004090056.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 899
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EY++ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 282 NQEYEDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 327
>gi|33416865|gb|AAH55543.1| Brd3a protein [Danio rerio]
Length = 515
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E ++ IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 290 RLSEQLKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 349
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 350 SREYQDAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 398
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 7/115 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I PMD TIKK++E+ Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN D+ +MA+ L +A ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQEEVELLPPAPKGKGRKP 155
>gi|327288352|ref|XP_003228892.1| PREDICTED: bromodomain-containing protein 3-like [Anolis
carolinensis]
Length = 734
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 311 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 370
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 371 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP V + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKARK 154
>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1056
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + H+ W F PVD LGL DY+E+I KPMD TI+K++E+ Y ++ + TD+
Sbjct: 182 VLKGLMAHQHGWVFNGPVDPVELGLVDYFEIIKKPMDLGTIQKRLESSAYHSIDDFKTDI 241
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV-TEEEKRREEEEA 221
L F+NAM YN++ S V+ MAK L K E +L+ ++ TE+ +RR+ E A
Sbjct: 242 FLTFENAMVYNEDGSVVYDMAKQLKVKAESDMKRLVAQLETEDLERRQNERA 293
>gi|126297864|ref|XP_001365890.1| PREDICTED: bromodomain-containing protein 3 [Monodelphis domestica]
Length = 724
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 303 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 362
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 363 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 160
Query: 223 AQLDMQLA 230
+ Q A
Sbjct: 161 STGAQQAA 168
>gi|332221876|ref|XP_003260089.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Nomascus
leucogenys]
gi|332221878|ref|XP_003260090.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Nomascus
leucogenys]
gi|441637315|ref|XP_004090055.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 945
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EY++ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 328 NQEYEDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 373
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 38 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ ++Q L ++ +EE+
Sbjct: 98 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEEQ 138
>gi|326925069|ref|XP_003208744.1| PREDICTED: bromodomain testis-specific protein-like [Meleagris
gallopavo]
Length = 824
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++R + +H ++WPF QPVD L L DYY +I KPMD STIKK++E Y E D
Sbjct: 38 VVMRAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKAAECIDD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK---VTEEEKRREEEEAEAQ 224
+ +F N YN D+ MA+ L F +K Q+ P+ + ++ KR+E+ E Q
Sbjct: 98 FKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPPEEILIPDKGKRKEKLSEEPQ 155
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF++ DV L + + P D TIKK+M+ EY++++E TDVRL+F N K
Sbjct: 302 YAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNFEYRDIQEFATDVRLMFMNCYK 361
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQ---------LLPKVTEE 212
+N +V MAK L FE + + LLP+ T E
Sbjct: 362 HNSPDHEVVAMAKKLQDVFETHFAKIPDEPATSVLLPQHTRE 403
>gi|449269062|gb|EMC79871.1| Bromodomain-containing protein 3 [Columba livia]
Length = 724
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 305 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 364
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 365 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 413
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQD 100
Query: 170 VRLVFKNA--MKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N + + D+ +MA+ L +A+ ++ ++LLP V + + R+
Sbjct: 101 FNTMFTNCLYLSFLQPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRK 156
>gi|345306075|ref|XP_001505872.2| PREDICTED: bromodomain-containing protein 3 [Ornithorhynchus
anatinus]
Length = 724
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 303 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 362
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 363 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 154
>gi|449478032|ref|XP_002199360.2| PREDICTED: bromodomain-containing protein 3 [Taeniopygia guttata]
Length = 722
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 303 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 362
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 363 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E + + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYFWSSSECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
V ++ YN D+ +MA+ L +A+ ++ ++LLP V + + R+
Sbjct: 101 FNTVLQSCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRK 154
>gi|297723469|ref|NP_001174098.1| Os04g0622700 [Oryza sativa Japonica Group]
gi|255675790|dbj|BAH92826.1| Os04g0622700 [Oryza sativa Japonica Group]
Length = 355
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + + K + F PV+V LGL DY+ VI PMD T++ + A Y + + D+
Sbjct: 8 ILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADI 67
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEE------KWL-QLLPKVTEEEKRREEEEAEA 223
RL F NA++YN +VH A LLA FE+ W Q L + E A
Sbjct: 68 RLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPA 127
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLS 283
+ Q+ A + KM + + E R+ + EEK L L L
Sbjct: 128 KAPAQVKPRAGNVKMRKTKARE----------------PNKREMTLEEKNLLRVGLESLP 171
Query: 284 PEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
E + L+IV + N + E+ELD+D T W L FV
Sbjct: 172 EEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFV 215
>gi|440293863|gb|ELP86910.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 358
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
I K + + RR + E + IL+ + A PF+ PVD L DYY V
Sbjct: 131 PIHKPEHISGRRPLSHE------VLPCKDILKTLKNLPEANPFLSPVDPIAQNLPDYYIV 184
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I +PMD TI K++ Y ++ + DVRL FKNAMKYN R+ VHV AKTLL F++K
Sbjct: 185 ITEPMDLGTITKKLRMGVYDHIDDFAADVRLTFKNAMKYNPPRNMVHVFAKTLLKYFDDK 244
Query: 202 WLQL 205
+L
Sbjct: 245 IKEL 248
>gi|395506368|ref|XP_003757505.1| PREDICTED: bromodomain-containing protein 3 [Sarcophilus harrisii]
Length = 724
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 303 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 362
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 363 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 154
>gi|330812863|ref|XP_003291336.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
gi|325078478|gb|EGC32127.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
Length = 564
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 18/237 (7%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
TIL I + K ++ F +PVD + + DY+++I PMD STI +++ ++Y +++ D
Sbjct: 332 TILSQIFKKKISYAFQRPVDPELENIPDYFDIIKNPMDISTIDSKLDNEKYGTIKDFAAD 391
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQL 229
VRL+F+NA+ YN E S V+ AK LL F+ +++ P EK +
Sbjct: 392 VRLMFENALTYNAEISPVYKYAKQLLTYFDNSFIKNYP----NEKIPTYKSLNPAPAAAP 447
Query: 230 AQDAAHAKMARDTSNELYEVDVHLDE------------LREMLVQKCRKTSTEEKRKLGA 277
AQ + + A + + D+ + E + +K S +E++ L
Sbjct: 448 AQPNSSSGSANTPNKRKLDSDIKVKEETSTATTSSSTNDSKSSSPPAKKYSDDERKNLME 507
Query: 278 ALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQ 334
+ LS ED+ L I+ QS + E +E+DM + L +++ F+ + K Q
Sbjct: 508 KINELSAEDVQTVLSIIDQS--AINQSDESLEIDMYKIDDKNLRQVEQFLNECFKKQ 562
>gi|326930474|ref|XP_003211372.1| PREDICTED: bromodomain-containing protein 3-like [Meleagris
gallopavo]
Length = 720
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 303 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 362
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 363 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP V + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRK 154
>gi|195429272|ref|XP_002062687.1| GK19581 [Drosophila willistoni]
gi|194158772|gb|EDW73673.1| GK19581 [Drosophila willistoni]
Length = 293
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 110 TILRNI---TQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
+L+N+ T K AW F +PVD + LGLDDY E++ +PMDF TIK++++A +YK+ E
Sbjct: 21 VLLKNLMSPTYKKLAWIFYEPVDPQTLGLDDYLEIVKEPMDFGTIKQRLDADDYKDAMEF 80
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
DVRL+F NA Y + + MAK L FE+ + +LL
Sbjct: 81 AKDVRLIFFNAYLYTNSDHVCYKMAKELQLIFEKMFTELL 120
>gi|118099425|ref|XP_425330.2| PREDICTED: bromodomain-containing protein 3 [Gallus gallus]
Length = 722
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 303 KLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 362
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 363 SREYQDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEHNYYWSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP V + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRK 154
>gi|395730261|ref|XP_002810633.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Pongo abelii]
Length = 1038
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF PVDV LGL +YY+++ PMD TIK++M+
Sbjct: 339 KVTEQLKHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 398
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+EYK+ + DVRL+F N KYN +V MA+ L FE +
Sbjct: 399 NQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 444
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 110 VVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 169
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ ++Q L ++ +EE+
Sbjct: 170 FNTMFSNCYLYNKPGDDIVLMAQTL----EKLFMQKLSQMPQEEQ 210
>gi|256079712|ref|XP_002576129.1| bromodomain-containing protein 3 brd3 [Schistosoma mansoni]
gi|353230012|emb|CCD76183.1| putative bromodomain-containing protein 3, brd3 [Schistosoma
mansoni]
Length = 692
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYY 139
I+K ++E R R+ E ++ IL++I+ ++ F++PVDV LGL DYY
Sbjct: 238 IKKPKREYEERNVGKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 297
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+V+ K MD STIK ++E+ +Y + DVRL+F N KYN E S+V + K L A F+
Sbjct: 298 DVVKKAMDLSTIKTKLESGQYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQAIFD 357
Query: 200 EKWLQL 205
E + ++
Sbjct: 358 ENFAKV 363
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ + + K WPF +PVD + L L DY ++I PMD TIK+++ K Y + E D+
Sbjct: 45 VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDL 104
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL 194
+F+N +N DV MA L
Sbjct: 105 FTMFRNCYIFNKPGDDVVAMAMKL 128
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 258 EMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQS 316
EM R + +EKR+L + +L E LG+ ++I+ Q + +E+E+D +
Sbjct: 521 EMSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQ 580
Query: 317 ESTLWRLKFFVKDALK 332
+TL L+ +VK L+
Sbjct: 581 HTTLRELEKYVKSVLQ 596
>gi|384486789|gb|EIE78969.1| hypothetical protein RO3G_03674 [Rhizopus delemar RA 99-880]
Length = 489
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGL 135
+E HVPS + A+ K M+ ++ + + +H ++PF+ PVD L +
Sbjct: 168 REIHVPS----KDYPETFTTASSKVMKYCLQTVKELKKQKYKH-LSFPFLYPVDPVALNI 222
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY ++ PMD STI+ ++ EY + D++L+F N YN ++ +AK L
Sbjct: 223 PDYPTIVKHPMDLSTIETKLNRNEYDSPDAFAADIKLMFDNCYLYNPPHLPIYDLAKQLQ 282
Query: 196 AKFEEKWLQLLPKVTEEE---KRR--------EEEEAEAQLDMQLA-------------- 230
A F+EKW Q +V EE+ KRR +E+ A+L+ +A
Sbjct: 283 AIFDEKWAQRPTEVIEEQPAKKRRISKVNRANQEDVTIAELERHIATISQQIESIKSSSS 342
Query: 231 ------QDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTST-EEKRKLGAALTRLS 283
+ + ++T + + + REM + T E+KR+L ++ L+
Sbjct: 343 KKSPKKRTTRPSPAKKETGTPPKKKKKRMTKYREMSSDEEDSGFTFEQKRQLSESINNLT 402
Query: 284 PEDLGKALEIVAQSNTGFQATA-EEVELDMDAQSESTLWRLKFFVK 328
+ L + ++I+ S + EE+ELD+D+ +TL RL +VK
Sbjct: 403 GDQLNEVVDIIRSSMPNLDSVGEEEIELDIDSLDINTLTRLNDYVK 448
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
++ I+RN+ +H+ A PF+ PVD L + DY +VI +P+D + I +++ EY V
Sbjct: 38 MKYCAAIMRNLKKHRDAAPFLNPVDYIKLNVPDYPQVIKRPIDLTLIDQKLNQNEYVTVD 97
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
+ DVRLVF N KYN + + V+ + + + FE+ Q+ P + E ++ E
Sbjct: 98 DFVADVRLVFNNCFKYNGPEAMISVLCQNVESAFEKGLRQMPPSLDELSSPISQQAPEDL 157
Query: 225 LD 226
+D
Sbjct: 158 MD 159
>gi|218200605|gb|EEC83032.1| hypothetical protein OsI_28113 [Oryza sativa Indica Group]
Length = 481
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 95/223 (42%), Gaps = 6/223 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + + K + F PVDV+ L L DY+ +I PMD T+K+ + Y + DV
Sbjct: 144 ILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFAADV 203
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
RL F NA++YN VH A LLA FE + + L +E +R E A
Sbjct: 204 RLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQP 263
Query: 231 QDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKA 290
+ E + R+ S EEK KL + L E +G
Sbjct: 264 PVPMPMQAPPRIGGGGRRPKPKAREPNK------REMSDEEKHKLRVEIGNLPEEKMGNV 317
Query: 291 LEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKS 333
L+IV + NT E VELD D TLW L FV + K+
Sbjct: 318 LQIVQKRNTDPALMGEVVELDFDEMDVETLWELDRFVVNCKKA 360
>gi|195167198|ref|XP_002024421.1| GL14811 [Drosophila persimilis]
gi|194107794|gb|EDW29837.1| GL14811 [Drosophila persimilis]
Length = 678
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ I +H +AWPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 45 TVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIHD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
+F N YN DV VMA+TL F +K ++ +PK
Sbjct: 105 FNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IETMPK 142
>gi|223993693|ref|XP_002286530.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977845|gb|EED96171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
Query: 98 EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA 157
E+ M +L+ QF A PF +PVD K LGL DY V+ KPMD +KK++
Sbjct: 5 EQAMSKLVSQF-------YAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNE 57
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
+YK++ + DVRL++KN M YN + SD +++A+T+ KFEEK+ +L+ + E
Sbjct: 58 SKYKSIHDAADDVRLIWKNCMTYNADGSDFYLLAQTMAKKFEEKFAKLVEQFGE 111
>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q +LR + +H+ W F +PVD L + DY+ VI KPMD T+K ++ Y N E
Sbjct: 65 QCLVLLRFLMEHRVGWLFEEPVDPVKLEIPDYFSVIRKPMDLGTVKSKLLKNVYSNADEF 124
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK----------VTEEEKRR 216
DVRL F NAM+YN ++VH +AK + FE +W +LL K VTE KR+
Sbjct: 125 AADVRLTFANAMRYNPPGNEVHTIAKEIKEIFEVRW-KLLKKKMVSKLSGVEVTEGSKRQ 183
Query: 217 EEE 219
E
Sbjct: 184 PVE 186
>gi|196014713|ref|XP_002117215.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
gi|190580180|gb|EDV20265.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
Length = 1478
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
KEKE P +R + ++ + + R+ +++ +++++ +H+ +WPF+QPVD +
Sbjct: 1329 KEKENQNPVLRAGAKRSASFSEGS--RLSTELKKCHELIKDLEEHRDSWPFLQPVDKNKV 1386
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
DYYE++ PMDF TIKK++ + YK+ RE TDVRLVF N +YN+ RS
Sbjct: 1387 P--DYYEIVKNPMDFQTIKKKLSSIRYKDPREFATDVRLVFINCAEYNNPRS 1436
>gi|347968593|ref|XP_003436250.1| AGAP002807-PB [Anopheles gambiae str. PEST]
gi|333467932|gb|EGK96763.1| AGAP002807-PB [Anopheles gambiae str. PEST]
Length = 1778
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVI 142
Q +S+ ++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I
Sbjct: 389 QGSSSSQYPPKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDII 448
Query: 143 DKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
KPMD T+K++M+ +EYK+ E DVRL+F N KYN DV M + L FE +
Sbjct: 449 KKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMR 507
Score = 85.1 bits (209), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 9/115 (7%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H+++WPF QPVD K L L DY+++I +PMD TIKK++E Y +E D
Sbjct: 43 TVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWTSKECIQD 102
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
+F N YN DV VMA+TL F K + L+PK +E E E Q
Sbjct: 103 FNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK--------DETEMEVQ 148
>gi|444519215|gb|ELV12653.1| Guanine nucleotide exchange factor VAV2 [Tupaia chinensis]
Length = 1580
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 8/121 (6%)
Query: 88 QEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDK 144
Q A +R K + E +R +IL+ + K +AWPF +PVD + L L DY+++I
Sbjct: 253 QHAGKRGK-----LSEHLRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKH 307
Query: 145 PMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
PMD ST+K++M+++EY + + D+RL+F N KYN +V MA+ L FE ++ +
Sbjct: 308 PMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAK 367
Query: 205 L 205
+
Sbjct: 368 M 368
>gi|194763657|ref|XP_001963949.1| GF20989 [Drosophila ananassae]
gi|190618874|gb|EDV34398.1| GF20989 [Drosophila ananassae]
Length = 907
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ LI+ T+++ I +H ++WPF QPVD K L L DY+++I PMD TIKK++E
Sbjct: 38 QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKHPMDMGTIKKRLENNY 94
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
Y + +E D +F N YN DV VMA+TL F +K ++L+PK
Sbjct: 95 YWSAKEAIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IELMPK 142
>gi|413921105|gb|AFW61037.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 429
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F PVDV+GL L DY +I PMD T+K+ + A Y + DVRL F NA++YN
Sbjct: 158 FNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEAFAGDVRLTFNNALRYNPP 217
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTS 243
VH A LLA FE + + V+ E++R++ E Q D+ +
Sbjct: 218 DHHVHRYAGNLLASFEGMYKE---AVSWFEQQRQQLEPPMQPDLPPPPQLPVVSVPVQAP 274
Query: 244 NELYEVDVHL-DELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ 302
+ + RE R+ EEK+KL + L E + L+IV + N+
Sbjct: 275 PRMGGGGRRPKPKARE---PNKREMDEEEKQKLRVEIENLPEEKMLNVLQIVQKRNSDPA 331
Query: 303 ATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNN 354
T E VELD D TLW L FV + K+ + N + +A N +
Sbjct: 332 FTGEVVELDFDELDMETLWELDRFVVNWRKALKKSQRNSMVNGDAAAAVNGD 383
>gi|363736907|ref|XP_003641771.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Gallus gallus]
Length = 995
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H ++WPF QPVD L L DYY +I KPMD STIKK++E Y E D
Sbjct: 38 VVMKAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKSAECIDD 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK---VTEEEKRREEEEAEAQ 224
+ +F N YN D+ MA+ L F +K Q+ P+ + ++ KR+E+ E Q
Sbjct: 98 FKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPPEEILIPDKGKRKEKLSEETQ 155
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+A PF++ DV L + + P D TIKK+M+ EY++++E TDVRL+F N K
Sbjct: 302 YARPFLRSADVVSFSLGEKKGITKCPTDLGTIKKKMDNFEYRDIQEFATDVRLMFMNCYK 361
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQ---------LLPKVTEE 212
N +V MAK L FE + + LLP+ T E
Sbjct: 362 RNSPDHEVVAMAKKLQDVFETHFAKIPDEPATSILLPQHTRE 403
>gi|226493721|ref|NP_001146156.1| uncharacterized protein LOC100279725 [Zea mays]
gi|219885991|gb|ACL53370.1| unknown [Zea mays]
gi|413921106|gb|AFW61038.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 484
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 106/237 (44%), Gaps = 8/237 (3%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K W F PVDV+GL L DY +I PMD T+K+ + A Y + DVRL F NA+
Sbjct: 154 KSVW-FNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRYPSHEAFAGDVRLTFNNAL 212
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM 238
+YN VH A LLA FE + + V+ E++R++ E Q D+ +
Sbjct: 213 RYNPPDHHVHRYAGNLLASFEGMYKE---AVSWFEQQRQQLEPPMQPDLPPPPQLPVVSV 269
Query: 239 ARDTSNELYEVDVHL-DELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQS 297
+ + RE R+ EEK+KL + L E + L+IV +
Sbjct: 270 PVQAPPRMGGGGRRPKPKARE---PNKREMDEEEKQKLRVEIENLPEEKMLNVLQIVQKR 326
Query: 298 NTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQGNNNNNDNNKNNNNSATNNN 354
N+ T E VELD D TLW L FV + K+ + N + +A N +
Sbjct: 327 NSDPAFTGEVVELDFDELDMETLWELDRFVVNWRKALKKSQRNSMVNGDAAAAVNGD 383
>gi|148235897|ref|NP_001090595.1| bromodomain containing 3 [Xenopus laevis]
gi|120537384|gb|AAI29055.1| LOC100036838 protein [Xenopus laevis]
Length = 783
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R+ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD S++K++M+
Sbjct: 348 RLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKNPMDLSSVKRKMD 407
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 408 GREYADAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 456
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E+ Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDCVKLSLPDYHKIIKNPMDMGTIKKRLESNYYWSANECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP V + + R+
Sbjct: 101 FNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGKGRK 154
>gi|63100514|gb|AAH95027.1| Brd3a protein [Danio rerio]
Length = 513
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
R E ++ IL+ + K +AWPF +PVD + L L DY+++I PMD ST+KK+M+
Sbjct: 291 RRSEQLKYCDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 350
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
++EY++ + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 351 SREYQDAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++ + +H++AWPF QPVD LGL DY+++I PMD TIKK++E+ Y + E D
Sbjct: 41 VVVETLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRLESVYYYSASECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN D+ +MA+ L +A ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVALMPQEEVELLPPAPKGKGRKP 155
>gi|379642603|ref|NP_001243832.1| bromodomain containing 3 [Xenopus (Silurana) tropicalis]
Length = 795
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD S++K++M+
Sbjct: 359 KLNEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMD 418
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
A+EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 419 AREYADAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 41 VVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQD 100
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRR 216
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 101 FNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRK 154
>gi|159475920|ref|XP_001696062.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158275233|gb|EDP01011.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 798
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 15/232 (6%)
Query: 98 EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA 157
+K+++++ R G+ + + + K A F +PVD G+ DY + I PMD TIK ++
Sbjct: 88 DKKIQDIWRLCGSTVDYLLKKKNAQVFGRPVDPVRDGVPDYLKFILHPMDLGTIKAKLRE 147
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
+ Y + RE D+RLV+ N YN + V L FE KW E+R +
Sbjct: 148 RRYNDPREFAADMRLVWSNCRTYNQIGTSVRQWGDQLSDDFERKWADY-----NCEQRWD 202
Query: 218 EEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREML-VQKCRKTSTEEKRKLG 276
D+ +D + + R ++ ++ ++ ++ M R ++ EKRKL
Sbjct: 203 --------DLMATRDPQNVSLDRRIASSARQLLQRVNSVQLMQEADPTRAMTSVEKRKLS 254
Query: 277 AALTRLSPEDLGKALEIVAQSNTGFQA-TAEEVELDMDAQSESTLWRLKFFV 327
AL+ L + L L I+A++ EE+ELD+D +TLWRL+ +
Sbjct: 255 IALSELQGDQLADVLNIIAENLKDVNPDDDEEIELDVDQLDNTTLWRLREYC 306
>gi|255580043|ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 536
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 53 FYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRME-ELIRQFGTI 111
F N K S + + +K +ER +I+++ E + +++M+ +I Q ++
Sbjct: 32 FAHNVEKNYRSRACDTENMKQNPRERS--AIKRRPTEMVEGQSKKKRKMDRSVIHQCASL 89
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++++ H W F +PVD L + DY+ +I PMD T+K ++E +Y E DVR
Sbjct: 90 VKSLMDHPCGWVFKEPVDPDKLHIPDYFSIITNPMDLGTVKSKLENNQYFESEEFAADVR 149
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L F NA+ YN + VH MA+ L FE +W L
Sbjct: 150 LTFSNALLYNTPPNYVHNMAEKLKKIFETRWKAL 183
>gi|344251852|gb|EGW07956.1| Bromodomain testis-specific protein [Cricetulus griseus]
Length = 565
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF PVD LGL +YY+++ PMD TIK +M+ +EYK+ E DVRL+F N K
Sbjct: 9 YAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYK 68
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE + ++
Sbjct: 69 YNPPDHEVVSMARMLQDVFEMHFAKI 94
>gi|194388908|dbj|BAG61471.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD + L L DY+++I PMD ST+K++M+ +EY + + DVRL+F N K
Sbjct: 9 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYK 68
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 69 YNPPDHEVVAMARKLQDVFEMRFAKM 94
>gi|323447957|gb|EGB03862.1| hypothetical protein AURANDRAFT_55416 [Aureococcus anophagefferens]
Length = 628
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
F +L+++ Q ++PFM PVD + LGL DY++V+ PMD T+++++ Y N +++
Sbjct: 316 HFVNLLKHVVQQPSSYPFMAPVDAEALGLADYHDVVKAPMDLGTVERRLGGGSYANPQKL 375
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
DVRL F NA KYN VH A L FE+K LL
Sbjct: 376 VDDVRLTFANAQKYNPPAHPVHEAATHLGCVFEKKLQNLL 415
>gi|290985307|ref|XP_002675367.1| bromodomain-containing protein [Naegleria gruberi]
gi|284088963|gb|EFC42623.1| bromodomain-containing protein [Naegleria gruberi]
Length = 718
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 41/276 (14%)
Query: 102 EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
E + ++ ++ + +HKW+WPF PVD L + DY++VI PMD T++K++ EY
Sbjct: 181 ESIQKKLQKLMGIVKKHKWSWPFNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNEYM 240
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE-----EKRR 216
+V + DVR+++ N YN SD++ MAK + F EK+++ + +V+ + ++
Sbjct: 241 DVYQFLDDVRVIWSNCYLYNPVDSDIYKMAKEVEKYFNEKYVKTVGEVSYDTTTTVQEEV 300
Query: 217 EEEEAEAQLDMQLAQDAAHAKMARDTSN---------ELYEVDVHLDELREMLVQKCRKT 267
A++ A + +K + + E + +LD + E +++ T
Sbjct: 301 TSPSAQSSTITTPASTPSTSKNKKSNGTTSSTKGRKKKTSETETNLDLMIETPIKEQVTT 360
Query: 268 --------------------------STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGF 301
S +K++L + L + L + + I+
Sbjct: 361 PSTTSKSKASSTKKTTTNKKTKPKTMSYNQKKELSTNIGSLEGDKLAEVVRIIQSKAPSA 420
Query: 302 QATAE-EVELDMDAQSESTLWRLKFFVKDALKSQGN 336
+ +E E+E+D+D ++TL+ L+ FV+ L + N
Sbjct: 421 SSKSETEIEIDLDKLDDATLFELEAFVEKNLPKEKN 456
>gi|413917010|gb|AFW56942.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 487
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+E + R+ IL + + K + F PVDV+GL L DY +I PMD T+K+ + A Y
Sbjct: 137 VEAMRRRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRY 196
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
+ DVRL F NA++YN VH A LLA FE + + V+ E++R++ E
Sbjct: 197 PSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKE---AVSWFEQQRQQLE 253
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALT 280
QLD+ ++ L + + K R+ EEK+KL +
Sbjct: 254 PPMQLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNK-REMDEEEKQKLRVEIE 312
Query: 281 RLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV---KDAL-KSQGN 336
L + + L+IV + N + E VELD D TLW L FV + AL KSQ N
Sbjct: 313 NLPEDKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKKSQRN 372
Query: 337 NNNNDNNKNNNNSATN 352
+ N + N A +
Sbjct: 373 SRMNGDAAVMNADAID 388
>gi|413917011|gb|AFW56943.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 493
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 8/256 (3%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+E + R+ IL + + K + F PVDV+GL L DY +I PMD T+K+ + A Y
Sbjct: 137 VEAMRRRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTAGRY 196
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
+ DVRL F NA++YN VH A LLA FE + + V+ E++R++ E
Sbjct: 197 PSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKE---AVSWFEQQRQQLE 253
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALT 280
QLD+ ++ L + + K R+ EEK+KL +
Sbjct: 254 PPMQLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNK-REMDEEEKQKLRVEIE 312
Query: 281 RLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV---KDAL-KSQGN 336
L + + L+IV + N + E VELD D TLW L FV + AL KSQ N
Sbjct: 313 NLPEDKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKKSQRN 372
Query: 337 NNNNDNNKNNNNSATN 352
+ N + N A +
Sbjct: 373 SRMNGDAAVMNADAID 388
>gi|159164343|pdb|2E7N|A Chain A, Solution Structure Of The Second Bromodomain From Human
Bromodomain-Containing Protein 3
Length = 117
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 9 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 68
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 69 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 117
>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
Length = 678
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 103 ELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
E ++ IL+ + K +AWPF +PVD + L L DY+++I PMD STI+K+M+ E
Sbjct: 306 EQMKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGE 365
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
Y + + TDVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 366 YSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 411
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H++AWPF QPVD L L DY++VI PMD TIKK++E Y + E D
Sbjct: 43 VVKTLWKHQFAWPFYQPVDAIKLCLHDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDF 102
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 103 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
>gi|384493798|gb|EIE84289.1| hypothetical protein RO3G_08999 [Rhizopus delemar RA 99-880]
Length = 569
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 52/254 (20%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+PF+ PVDV GL + DY +++ PMD STI+K++ EY + D+RL+F N YN
Sbjct: 254 YPFLHPVDVVGLNIPDYVDIVKHPMDLSTIEKKLNDGEYAEPEDFENDIRLMFNNCYLYN 313
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPKV-------------------------TEEEKRR 216
VH M + L F++KW Q PK ++K
Sbjct: 314 PPSLPVHKMGRQLEKAFDDKWAQRPPKTEPTPLVDDAPEEEFDEVVEEDDSEDERDQKIA 373
Query: 217 EEEEAEAQLDMQLAQDAAH-----AKMARDTSNELYEVDVHLDELREMLV-QKCRKTST- 269
E E A + Q+A + A+ R TSN V+ + E + +K R+TST
Sbjct: 374 ELERHIATISQQIASIKSQKRKKGAEKPRRTSN----VNKTIKEKKPSAPKEKRRRTSTT 429
Query: 270 ---------------EEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATA-EEVELDMD 313
++K+ L + L+ + L ++I+ S EE+ LD+D
Sbjct: 430 NKKKEKKEELPEFTFDQKKDLSERINNLTGDRLNTVVDIIRSSMPNLDGQGQEEIVLDID 489
Query: 314 AQSESTLWRLKFFV 327
+ STL RL FV
Sbjct: 490 SLDRSTLHRLHEFV 503
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 64/103 (62%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
I+ G I+RN+ +H+ A PF+QPVD L + DY ++I PMD +T+ K++ + +Y +V
Sbjct: 58 IKYCGAIMRNLKKHRDAAPFLQPVDYVKLNIPDYPKIIRHPMDLATVDKKLNSGQYDSVD 117
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+ DVRLVF N K+N + V ++ + + + FE+ Q+ P
Sbjct: 118 QWIYDVRLVFNNCFKFNGPEAMVSMLCQNVESAFEKSLRQMPP 160
>gi|259090114|pdb|2WP1|A Chain A, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
gi|259090115|pdb|2WP1|B Chain B, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
Length = 126
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF PVD LGL +YY+V+ PMD TIK +M+
Sbjct: 11 KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMD 70
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN +V MA+TL FE
Sbjct: 71 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFE 113
>gi|195148234|ref|XP_002015079.1| GL19519 [Drosophila persimilis]
gi|194107032|gb|EDW29075.1| GL19519 [Drosophila persimilis]
Length = 486
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 69 STLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFM 125
ST+++ ++E ++ + + SR K +K++ E ++ IL + K +AWPF
Sbjct: 81 STMQNVKQEPGPSALLPKVKFESRLVKP-KKKLSEALKSCNEILMVLFSKKHSAYAWPFY 139
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
+PVD + LGL DYY +I PMD T+K++++ + YK+ D+RL+F N KYN
Sbjct: 140 EPVDAQNLGLYDYYNIIKTPMDLGTVKQKLDNRVYKSASAFAADMRLIFSNCYKYNPVHH 199
Query: 186 DVHVMAKTLLAKFEEKWLQL 205
D+ +M + L FE ++++
Sbjct: 200 DIVIMCEKLQLAFEMLYVKV 219
>gi|354480438|ref|XP_003502414.1| PREDICTED: bromodomain testis-specific protein-like [Cricetulus
griseus]
Length = 839
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF PVD LGL +YY+++ PMD TIK +M+
Sbjct: 267 KVTEQLKYCSEILKEMLAKKHLSYAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMD 326
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+EYK+ E DVRL+F N KYN +V MA+ L FE
Sbjct: 327 NQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVSMARMLQDVFE 369
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYVKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+ L E+ +LQ L ++ +EE+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFLQKLSQMPQEEQ 137
>gi|312373441|gb|EFR21184.1| hypothetical protein AND_17422 [Anopheles darlingi]
Length = 1442
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVI 142
Q +S+ ++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I
Sbjct: 7 QGTTSSQYPPKNKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDII 66
Query: 143 DKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
KPMD T+K++M+ +EYK+ E DVRL+F N KYN DV M + L FE +
Sbjct: 67 KKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMR 125
>gi|320170819|gb|EFW47718.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1698
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L+N +++PF++PVDV+GLGL DYY+ I PMD ST++ Q+E EY ++ D+R
Sbjct: 305 LQNREYRYFSFPFLEPVDVEGLGLVDYYDTITHPMDLSTLQTQLENGEYTDLSTAVRDLR 364
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
L+F N +YN +V MA L E+K L LLP
Sbjct: 365 LIFANCYRYNGSDHEVSRMAHRLEQVLEQK-LALLP 399
>gi|312373442|gb|EFR21185.1| hypothetical protein AND_17423 [Anopheles darlingi]
Length = 401
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++ + +H+++WPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 75 TVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNYYWSAKECIKD 134
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
+F N YN DV VMA+TL F K + L+PK
Sbjct: 135 FNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK 172
>gi|198474627|ref|XP_002132733.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
gi|198138474|gb|EDY70135.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
Length = 485
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 97 AEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
+K++ E ++ IL + K +AWPF +PVD + LGL DYY +I PMD T+K+
Sbjct: 108 PKKKLSEALKSCNEILMVLFSKKHSAYAWPFYEPVDAQNLGLYDYYNIIKTPMDLGTVKQ 167
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+++ + YK+ D+RL+F N KYN D+ +M + L FE ++++
Sbjct: 168 KLDNRVYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLYVKV 219
>gi|226485709|emb|CAX75274.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 612
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYY 139
I+K ++E R + R+ E ++ IL++I+ ++ F++PVDV LGL DYY
Sbjct: 159 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 218
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+V+ K MD STI+ ++E+ +Y + DVRL+F N KYN E S+V + K L F+
Sbjct: 219 DVVKKAMDLSTIRTKLESGQYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFD 278
Query: 200 EKWLQL 205
E + ++
Sbjct: 279 ENFAKV 284
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 258 EMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQS 316
EM R + +EKR+L + +L E LG+ ++I+ Q + +E+E+D +
Sbjct: 441 EMSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQ 500
Query: 317 ESTLWRLKFFVKDALK 332
+TL L+ +VK L+
Sbjct: 501 HTTLRELEKYVKSVLQ 516
>gi|308804515|ref|XP_003079570.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
gi|116058025|emb|CAL54228.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
Length = 446
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 62 GSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA 121
+N G LKD P K+ Q E+ E R +E++R+ +L +H++
Sbjct: 23 AANGVGYKKLKDGR-----PVTTKRLQREYEIEQDREARRKEMVRRCREVLNLTKKHRYH 77
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
F+ PVD G+ DY +++ PMD T+K++++ ++Y + C D+RL+F N YN
Sbjct: 78 KIFLFPVDPVRQGIPDYPQIVKNPMDLGTVKRKLDERKYVGPEDFCADMRLIFSNCALYN 137
Query: 182 DERSDVHVMAKTLLAKFEEKWLQ 204
+SD +M +T+ FE WLQ
Sbjct: 138 GSQSDAGIMGETVHQGFEAAWLQ 160
>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 570
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+I Q ++++++ H W F +PVD + L + DY+ VI PMD T+K ++E +Y
Sbjct: 82 VIHQCTSLVKSLMNHPCGWVFKEPVDPEKLEIPDYFSVITNPMDLGTVKSKLENNQYFGA 141
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
E DVRL F NA+ YN + VH MA+ L FE +W L
Sbjct: 142 EEFAADVRLTFSNALLYNPPLNYVHKMAEKLKKIFETRWKAL 183
>gi|226485707|emb|CAX75273.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYY 139
I+K ++E R + R+ E ++ IL++I+ ++ F++PVDV LGL DYY
Sbjct: 232 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 291
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+V+ K MD STI+ ++E+ +Y + DVRL+F N KYN E S+V + K L F+
Sbjct: 292 DVVKKAMDLSTIRTKLESGQYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFD 351
Query: 200 EKWLQL 205
E + ++
Sbjct: 352 ENFAKV 357
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ + + K WPF +PVD + L L DY ++I PMD TIK+++ K Y + E D+
Sbjct: 39 VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDL 98
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL--LAKFEEKWL-----QLLPKVTEEEKRREEEEAEA 223
+F+N +N DV MA L +A+ K++ +L P+ T + R +
Sbjct: 99 FTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTPETELCPQKTPKSTRPIATPMQI 158
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVD 250
M+ AA + VD
Sbjct: 159 HPPMESIHPAASVNHTEGLNGSAVSVD 185
>gi|226485705|emb|CAX75272.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYY 139
I+K ++E R + R+ E ++ IL++I+ ++ F++PVDV LGL DYY
Sbjct: 232 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 291
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+V+ K MD STI+ ++E+ +Y + DVRL+F N KYN E S+V + K L F+
Sbjct: 292 DVVKKAMDLSTIRTKLESGQYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFD 351
Query: 200 EKWLQL 205
E + ++
Sbjct: 352 ENFAKV 357
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ + + K WPF +PVD + L L DY ++I PMD TIK+++ K Y + E D+
Sbjct: 39 VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDL 98
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL--LAKFEEKWL-----QLLPKVTEEEKRREEEEAEA 223
+F+N +N DV MA L +A+ K++ +L P+ T + R +
Sbjct: 99 FTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTPETELCPQKTPKSTRPIATPMQI 158
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVD 250
M+ AA + VD
Sbjct: 159 HPPMESIHPAASVNHTEGLNGSAVSVD 185
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 258 EMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQS 316
EM R + +EKR+L + +L E LG+ ++I+ Q + +E+E+D +
Sbjct: 514 EMSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQ 573
Query: 317 ESTLWRLKFFVKDALK 332
+TL L+ +VK L+
Sbjct: 574 HTTLRELEKYVKSVLQ 589
>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
Length = 567
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 83 IRKQQQEASRREKAAEKRMEE------------LIRQFGTILRNITQHKWAWPFMQPVDV 130
I KQ+ S K +M E + +Q +L+++ H W F +PVD
Sbjct: 53 IVKQKSSVSGSRKRGPPKMIECKQQKRLKMDRAVTQQCSALLKSLMVHPAGWVFNKPVDP 112
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
L + DY+ +I PMD T+K ++ Y +++E D+RL F NAM YN ++VH M
Sbjct: 113 VALNIPDYFSIISIPMDLGTVKSKLGKNCYASIKEFADDIRLTFSNAMLYNPPTNNVHKM 172
Query: 191 AKTLLAKFEEKWLQL 205
A+ L FE W L
Sbjct: 173 AEELNGIFETSWKAL 187
>gi|218188757|gb|EEC71184.1| hypothetical protein OsI_03067 [Oryza sativa Indica Group]
Length = 264
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 75 EKERHVPSIRKQQQEASRREKAA-EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
E++ H+P ++ A+ A + + + + G +L + +H+ W F +PVD + L
Sbjct: 22 ERKHHLPELQPPAVAAASPGVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARAL 81
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
L DYY I PMD T+++++E + Y + DVRL F NAM YN V+ A
Sbjct: 82 RLVDYYLRISDPMDLGTVRRRLERRCYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAE 141
Query: 194 LLAKFEEKWLQLL---PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTS----NEL 246
L FE W +L P+ + E++R +L + A RD N +
Sbjct: 142 LSEIFEAGWPSVLAAPPRPPDAERKRRLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGM 201
Query: 247 YEVDVH------LDELREMLVQKCRKTSTEEKRKLGA 277
EVD+ LDEL M+ + + K K GA
Sbjct: 202 MEVDLDRADSATLDELDRMVAEHGAALAGVVKVKQGA 238
>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
Length = 701
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVD + L L DY+++I PMD STI+K+M+
Sbjct: 292 KLGEQMKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMD 351
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
EY + TDVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 352 KGEYNEPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 400
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H++AWPF QPVD L L DY++VI PMD TIKK++E Y + E D
Sbjct: 43 VVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASEAMQDF 102
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 103 NTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ IL+ + K +AWPF +PVD + L L DY+++I PMD STI+K+M+
Sbjct: 282 QLGEQMKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMD 341
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
EY + TDVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 342 KGEYSEPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 390
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY++VI PMD TIKK++E Y + D
Sbjct: 26 VVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRLENNYYWSASGAMQD 85
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEA 221
+F N YN D+ +MA+ L +A+ ++ + LLP + + + ++ A
Sbjct: 86 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVALLPPAPKGKNKSKQPSA 144
>gi|226485711|emb|CAX75275.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 694
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 83 IRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYY 139
I+K ++E R + R+ E ++ IL++I+ ++ F++PVDV LGL DYY
Sbjct: 232 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 291
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+V+ K MD STI+ ++E+ +Y + DVRL+F N KYN E S+V + K L F+
Sbjct: 292 DVVKKAMDLSTIRTKLESGQYHTKYDFADDVRLMFNNCYKYNGEDSEVARVGKQLQTIFD 351
Query: 200 EKWLQL 205
E + ++
Sbjct: 352 ENFAKV 357
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ + + K WPF +PVD + L L DY ++I PMD TIK+++ K Y + E D+
Sbjct: 39 VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLKFYHSSSECLDDL 98
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL--LAKFEEKWL-----QLLPKVTEEEKRREEEEAEA 223
+F+N +N DV MA L +A+ K++ +L P+ T + R +
Sbjct: 99 FTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTPETELCPQKTPKSTRPIATPMQI 158
Query: 224 QLDMQLAQDAAHAKMARDTSNELYEVD 250
M+ AA + VD
Sbjct: 159 HPPMESIHPAASVNHTEGLNGSAVSVD 185
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 258 EMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQS 316
EM R + +EKR+L + +L E LG+ ++I+ Q + +E+E+D +
Sbjct: 514 EMSENNVRPMTYDEKRQLSLDINKLPGEKLGRVVQIIQQREPSHRDCNPDEIEIDFETLQ 573
Query: 317 ESTLWRLKFFVKDALK 332
+TL L+ +VK L+
Sbjct: 574 HTTLRELEKYVKSVLQ 589
>gi|350539095|ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186134|emb|CAC33449.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186138|emb|CAC33451.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%)
Query: 102 EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
E ++++ IL + +HK W F PVD + LGL DY+++I +PMD T+K + Y
Sbjct: 190 ESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLGTVKSNLAKNFYP 249
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREE 218
+ E DVRL F NA+ YN + V+ A+ LL +FE+ + L K+ + E R +
Sbjct: 250 SPFEFAADVRLTFNNALLYNPKTDQVNAFAEQLLGRFEDMFRPLQDKMNKLEGGRRD 306
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ + EEK KLG L L E + + ++I+ + N +E+ELD++A TLW L
Sbjct: 407 REMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 466
Query: 325 FFV 327
FV
Sbjct: 467 RFV 469
>gi|395854578|ref|XP_003799760.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Otolemur garnettii]
Length = 773
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 63 SNSKGSSTLKDKEKERHVPSIRKQQQEA---SRREKAAEK--RMEELIRQFGTILRNITQ 117
+NS+ S TL +K+ R +P I++ Q S+++ K ++ E +R IL+ +
Sbjct: 157 ANSESSPTLTEKQSAR-MPPIKENAQNVLPDSQQQYNVGKSVKVTEQLRHCSEILKEMLA 215
Query: 118 HK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
K +AWPF VDV LGL +Y +++ PMD TIK +M+ +EYK+ E DVRL+
Sbjct: 216 KKHFSYAWPFYNSVDVNALGLHNYXDIVKHPMDLGTIKWKMDNQEYKDAYEFAADVRLML 275
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFE 199
N KYN +V M K L FE
Sbjct: 276 MNCYKYNPPDHEVVTMTKMLQDVFE 300
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD +TIKK +E K Y E D+ +F N YN D+ +MA+TL F +Q
Sbjct: 1 MDLNTIKKHLENKYYVKASECIEDLNTMFSNCYLYNKPXDDIVLMAQTLKKLF----IQK 56
Query: 206 LPKVTEEEK 214
L ++ +EEK
Sbjct: 57 LSQMPQEEK 65
>gi|89267975|emb|CAJ81450.1| bromodomain, testis-specific [Xenopus (Silurana) tropicalis]
Length = 438
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E ++ +IL+ + K +AWPF +PVD + L L DY+++I PMD S++K++M+
Sbjct: 316 KLNEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMD 375
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
A+EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 376 AREYADAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 424
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 113 RNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
+ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 1 KTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDFNT 60
Query: 173 VFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREE 218
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 61 MFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPP 113
>gi|348690450|gb|EGZ30264.1| hypothetical protein PHYSODRAFT_310264 [Phytophthora sojae]
Length = 1333
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+IL+ + + + PF+ PVD LG+ DY+ VI +PMD TI+ +E Y
Sbjct: 338 SILKGLMSNPKSAPFLVPVDPVALGIPDYFHVIKEPMDLGTIRSNLETGFYDTPSAFAEH 397
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
VRLVF+NAM YN S VH+ A+ L+ FE ++ L
Sbjct: 398 VRLVFRNAMLYNAAHSQVHIYARKLMDDFERRFKSL 433
>gi|30694987|ref|NP_199467.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|327488241|sp|Q9LS28.2|GTE12_ARATH RecName: Full=Transcription factor GTE12; AltName:
Full=Bromodomain-containing protein GTE12; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12
gi|26451383|dbj|BAC42791.1| unknown protein [Arabidopsis thaliana]
gi|332008014|gb|AED95397.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 494
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q +LR + +H+ W F +PVD + + DY+ VI KPMD T+K ++ Y N E
Sbjct: 72 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEF 131
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
DVRL F NAM YN ++VH +AK + FE +W L+ K
Sbjct: 132 AADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 173
>gi|195397557|ref|XP_002057395.1| GJ16365 [Drosophila virilis]
gi|194147162|gb|EDW62881.1| GJ16365 [Drosophila virilis]
Length = 429
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 81 PSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYE 140
P + Q+ R +++ LI+ T+++ I +H ++WPF QPVD K L L DY++
Sbjct: 23 PPVVPPQERPGRNTN----QLQYLIK---TVMKVIWKHHFSWPFQQPVDAKKLNLPDYHK 75
Query: 141 VIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
+I +PMD TIKK++E Y + +E D +F N YN DV VMA+TL F +
Sbjct: 76 IIKQPMDMGTIKKRLENNYYWSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQ 135
Query: 201 KWLQLLPK 208
K ++ +PK
Sbjct: 136 K-IESMPK 142
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 97 AEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
+++++ + ++ IL+ + K +AWPF +PVD + LGL DY+++I KPMD T+K+
Sbjct: 338 SKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKR 397
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
+M+ +EYK+ E + ++ RS
Sbjct: 398 KMDNREYKSAPEFAARCSINIHQLLQIQSARS 429
>gi|8885596|dbj|BAA97526.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%)
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q +LR + +H+ W F +PVD + + DY+ VI KPMD T+K ++ Y N E
Sbjct: 84 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEF 143
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
DVRL F NAM YN ++VH +AK + FE +W L+ K
Sbjct: 144 AADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 185
>gi|167395679|ref|XP_001741703.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165893699|gb|EDR21839.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 481
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 52/81 (64%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
A PF+ PVD L DYY VI PMD STI K+ Y+++ + DVRLVFKNAMKY
Sbjct: 284 ANPFLTPVDPIAQNLPDYYVVIRHPMDLSTITKKFRYGIYEHIDDFANDVRLVFKNAMKY 343
Query: 181 NDERSDVHVMAKTLLAKFEEK 201
N R+ +H+ A TLL F+++
Sbjct: 344 NPPRNTIHIFASTLLRYFDDQ 364
>gi|67483926|ref|XP_657183.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474427|gb|EAL51797.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704936|gb|EMD45090.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 485
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL ++ A PF+ PVD L DYY VI PMD +TI K+ Y+++ + DV
Sbjct: 278 ILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFANDV 337
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
RLVFKNAMKYN R+ +H+ A TLL F+++
Sbjct: 338 RLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ 368
>gi|407044057|gb|EKE42339.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 485
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL ++ A PF+ PVD L DYY VI PMD +TI K+ Y+++ + DV
Sbjct: 278 ILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKFRYGIYEHIDDFANDV 337
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
RLVFKNAMKYN R+ +H+ A TLL F+++
Sbjct: 338 RLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ 368
>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
SI + S KA + R IL + H W F +PVD G+ DY++V
Sbjct: 59 SISSSENRPSSNNKAGSMNASK-TRVCRNILGKLMDHPGGWLFHKPVDPDLFGIPDYFDV 117
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD T+KK++ K Y + + DVRL F NAM YN + VH +A+ L F +
Sbjct: 118 IRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSE 177
Query: 202 WLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM 238
W + E K + QL M++ + AH +
Sbjct: 178 W------TSYERKWIDRNLKPVQLPMKVIK--AHVAV 206
>gi|326936108|ref|XP_003214100.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 601
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQF----GTILRNITQHKWAWPFMQPVDVKGLGL 135
VP+++ Q E + K+ + Q +++ + +H++AWPF QPVD LGL
Sbjct: 31 VPALQTPQANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGL 90
Query: 136 DDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DY+++I +PMD TIK+++E Y E D +F N YN D+ +MA+TL
Sbjct: 91 PDYHKIIKQPMDMGTIKRRLENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 150
Query: 196 AKFEEKWLQLLP 207
F +K Q+ P
Sbjct: 151 KIFLQKVAQMPP 162
>gi|57282322|emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%)
Query: 102 EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
E ++++ +L + +HK W F PVD + LGL DY+++I +P D T K + Y
Sbjct: 190 ENMMKECTQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDLGTXKSNLSNNFYP 249
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
E DVRL F NA+ YN + VH A+ LLA+FE+
Sbjct: 250 TPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 288
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R+ S EEK KLG L L E + + ++I+ + N +E+ELD++A TLW L
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475
Query: 325 FFV 327
FV
Sbjct: 476 RFV 478
>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1603
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L+ + H+ AW F PVD LGL DY+EVI KPMD TI+K++E Y+ + + V
Sbjct: 582 LKTLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLENGVYQRLDDFKEHVL 641
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV-TEEEKRREEEEA 221
L F NAM YN E S V+ MA + KF+ +++L+ ++ EE+ +R+ EA
Sbjct: 642 LTFDNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQLNAEEDVKRKNGEA 692
>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H W F +PVD G+ DY++VI PMD T+KK++ K Y + + DV
Sbjct: 87 ILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADV 146
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RL F NAM YN + VH +A+ L F +W
Sbjct: 147 RLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEW 178
>gi|301118949|ref|XP_002907202.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105714|gb|EEY63766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 786
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 56/93 (60%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+IL+ + + A PFM PVD LG+ DY+ VI +PMD TI+ +E+ Y + +
Sbjct: 282 SILKGLMANPKAAPFMAPVDPVALGIPDYFHVIKEPMDLGTIRNNLESGFYDSPSDFAEH 341
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
VRL F+NA YN S VH+ A+ L+ FE+++
Sbjct: 342 VRLTFRNATLYNAAHSQVHIYARKLVDDFEKRF 374
>gi|357476123|ref|XP_003608347.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509402|gb|AES90544.1| Bromodomain-containing protein [Medicago truncatula]
Length = 390
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 37 FQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKA 96
+++ +L+ R+ E + +S G ++K S+ K +R P A + K
Sbjct: 90 LEQIRQLQTRI-ESGELKSRSSHNGGGSAKKSANKKFSGNKRPFP--------AEKELKR 140
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ + ++ G IL+ + + K W F PVD L L DY+++I PMD T+K ++
Sbjct: 141 SKSEVGSAMKACGQILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLA 200
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
Y E DV+L FKNA+ YN + DV+ A LL KFEE
Sbjct: 201 KNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEE 244
>gi|213406251|ref|XP_002173897.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001944|gb|EEB07604.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 726
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 117 QHK-WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFK 175
QH+ +A+PF QPVD G DY++VI PMD T++ ++ EY N+++ DV LVFK
Sbjct: 409 QHETYAYPFYQPVDPVAFGCPDYFKVIKHPMDLGTMQNKLNHNEYANIKDFEADVNLVFK 468
Query: 176 NAMKYNDERSDVHVMAKTLLAKFEEKW 202
N ++N + V++M K L F KW
Sbjct: 469 NCYRFNPPGTPVYLMGKKLETVFRSKW 495
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+LR + + + + PF PVD + DY +I PMD ST+++++ +EY + + D+
Sbjct: 248 MLRQLRRCRDSIPFRVPVDPVKQNIPDYPLIIKHPMDLSTMQRKLTNREYDSAQSFIDDM 307
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L+F N YN S V VM K L A F ++ QL
Sbjct: 308 NLMFDNCFLYNGTESPVGVMGKNLQATFTKQLKQL 342
>gi|325187425|emb|CCA21963.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 950
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
++++ +I++ + + A PF+ PVD LG+ DY++VI +PMD TI++ +E+ Y +
Sbjct: 402 MLKKCHSIIKRLMANSKAGPFLTPVDPVALGIPDYFKVIKEPMDLGTIRQNLESGFYSDA 461
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKF 198
+ VRLVF NAM YN S VH+ A+ L+ F
Sbjct: 462 SILIEHVRLVFSNAMLYNAAHSQVHIFAQKLMDDF 496
>gi|58865638|ref|NP_001012031.1| bromodomain testis-specific protein [Rattus norvegicus]
gi|50927337|gb|AAH78999.1| Brdt protein [Rattus norvegicus]
gi|165971045|gb|AAI58631.1| Brdt protein [Rattus norvegicus]
Length = 326
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I+ PMD STIKK++E + Y+ E D
Sbjct: 37 VVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENRYYEKASECVGD 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ VMA+ L E+ ++Q L ++ +EE+
Sbjct: 97 FNTMFSNCYLYNKPGDDIVVMAQAL----EKLFMQKLSQMPQEEQ 137
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKG 132
KE V S+ Q+ R K ++ E ++ IL+ + K +AWPF PVDV
Sbjct: 245 KENTVKSVLPDSQQQHRVLKTV--KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDVDA 302
Query: 133 LGLDDYYEVIDKPMDFSTIK 152
LGL +YY+++ PMD TIK
Sbjct: 303 LGLHNYYDIVKNPMDLGTIK 322
>gi|134105292|pdb|2OO1|A Chain A, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105293|pdb|2OO1|B Chain B, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105294|pdb|2OO1|C Chain C, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105295|pdb|2OO1|D Chain D, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|340708300|pdb|3S92|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 113
Score = 86.3 bits (212), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K++M+
Sbjct: 4 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 63
Query: 157 AKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+EY + + DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 64 GREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 112
>gi|358055176|dbj|GAA98945.1| hypothetical protein E5Q_05633 [Mixia osmundae IAM 14324]
Length = 754
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 30/262 (11%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
++ K ++E ++ I+R++ +H+++ +PF+ PVD + L + DY V+ PMD T+K
Sbjct: 430 SSSKSIQEGLKFCKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMK 489
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW---LQLLPKV 209
++++A Y + E D RLV +N K+N + VH M + L A FE +W P+
Sbjct: 490 RRLDAGYYNHASEFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRDKPASRPET 549
Query: 210 --------TEEEKRREEEEAEAQL-DMQ-----LAQDA-AHAKMARDTSNELYEVDVHLD 254
++ EKR + E Q+ D+Q L + A AK +R + + +
Sbjct: 550 EEPDSDYESDPEKRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYSK 609
Query: 255 ELREMLVQKCRKT--------STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQAT-A 305
+ QK + + + E KR+L +T L +A++I+ + +
Sbjct: 610 SGKPKTGQKGKASDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDES 669
Query: 306 EEVELDMDAQSESTLWRLKFFV 327
+E+ELD+DA TL +L FV
Sbjct: 670 KEIELDIDALDPQTLLKLYQFV 691
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
+RN+ +++ A F PVD LG+ Y+ I PMD ST++K + A EY +V E ++V+
Sbjct: 231 VRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEEFRSEVK 290
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
LVF N +N E S + +MA+ L F + L+ P + +
Sbjct: 291 LVFDNCCAFNREESPIGLMARRLEGAFNKTMLKCPPALPAPQP 333
>gi|358055177|dbj|GAA98946.1| hypothetical protein E5Q_05634 [Mixia osmundae IAM 14324]
Length = 750
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 30/262 (11%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
++ K ++E ++ I+R++ +H+++ +PF+ PVD + L + DY V+ PMD T+K
Sbjct: 426 SSSKSIQEGLKFCKDIIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMK 485
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW---LQLLPKV 209
++++A Y + E D RLV +N K+N + VH M + L A FE +W P+
Sbjct: 486 RRLDAGYYNHASEFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRDKPASRPET 545
Query: 210 --------TEEEKRREEEEAEAQL-DMQ-----LAQDA-AHAKMARDTSNELYEVDVHLD 254
++ EKR + E Q+ D+Q L + A AK +R + + +
Sbjct: 546 EEPDSDYESDPEKRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYSK 605
Query: 255 ELREMLVQKCRKT--------STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQAT-A 305
+ QK + + + E KR+L +T L +A++I+ + +
Sbjct: 606 SGKPKTGQKGKASDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDES 665
Query: 306 EEVELDMDAQSESTLWRLKFFV 327
+E+ELD+DA TL +L FV
Sbjct: 666 KEIELDIDALDPQTLLKLYQFV 687
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
+RN+ +++ A F PVD LG+ Y+ I PMD ST++K + A EY +V E ++V+
Sbjct: 227 VRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANEYASVEEFRSEVK 286
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
LVF N +N E S + +MA+ L F + L+ P + +
Sbjct: 287 LVFDNCCAFNREESPIGLMARRLEGAFNKTMLKCPPALPAPQP 329
>gi|198425802|ref|XP_002127242.1| PREDICTED: similar to bromodomain-containing protein 2 [Ciona
intestinalis]
Length = 1083
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
++WPF + VD LGL DYY++I PMD T++K+ME++EY+ E D+RL+ N K
Sbjct: 377 FSWPFYKSVDADLLGLHDYYDMIKNPMDLGTMRKKMESREYRTPDEFAYDMRLIVTNCYK 436
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN DV MAK L FE K+ ++
Sbjct: 437 YNPPDHDVVAMAKKLSDVFEMKFAKM 462
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 56/91 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ ++ +H +AWPF PVD LGL DY+++I PMD + IKK++E +Y + +E D
Sbjct: 46 VMTSLWKHHFAWPFHVPVDPVKLGLPDYFDIIKHPMDMALIKKKLETNQYYSAKECLQDF 105
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
L+F N YN DV +MA+TL F +K
Sbjct: 106 NLMFSNCYIYNKPTDDVVLMAQTLEKNFLQK 136
>gi|195063000|ref|XP_001996295.1| GH22416 [Drosophila grimshawi]
gi|193899790|gb|EDV98656.1| GH22416 [Drosophila grimshawi]
Length = 291
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++++ H +A+PF QPV+ K L L DY+++I +PMD +TIKK++ Y + E D
Sbjct: 35 TVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANNYYWSATEAAAD 94
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+ L+F N YN DV +MAK L E +LQ + + +EE
Sbjct: 95 INLIFTNCSLYNKPTEDVIIMAKVL----ESVFLQAIKDMPKEE 134
>gi|355671954|gb|AER94962.1| bromodomain adjacent to zinc finger domain, 2B [Mustela putorius
furo]
Length = 950
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + S+ +QE+S K ++ + + IL + H+ AWPF+
Sbjct: 811 RGSKDLKKRKMEENT-SVNLSKQESSTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 869
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF N +N++ S
Sbjct: 870 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFAVDVRLVFDNCETFNEDDS 927
Query: 186 DVHVMAKTLLAKFEEKWLQLL 206
D+ ++ FE+KW +
Sbjct: 928 DIGRAGHSMRKYFEKKWTDIF 948
>gi|340721599|ref|XP_003399205.1| PREDICTED: bromodomain-containing protein 2-like [Bombus
terrestris]
Length = 388
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + +H++AWPF QPVD K L L DY+++I +PMD TIKK++E Y + +E D
Sbjct: 78 VLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENTYYWSGKECIQDF 137
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN DV VMA+ L F K Q+
Sbjct: 138 NTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|313232668|emb|CBY19338.1| unnamed protein product [Oikopleura dioica]
Length = 814
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + +H+ +WPF +PVD L L DYYEV+ KPMD STIKK+ + +Y + E +D
Sbjct: 24 ILVKVQKHQHSWPFQKPVDPVALALPDYYEVVKKPMDLSTIKKKFDTYQYNSGAEALSDF 83
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
++F N YN DV +M + + + F++ L+ ++ + R E E ++++ L
Sbjct: 84 EVMFSNCYLYNKPTDDVTLMCQAVESAFKD----LVKRMNSDPTLRSELEVNLEINITLP 139
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F +PVD K L L DY ++I PMD T+++++ +Y + E+ D+ L+F N +YN
Sbjct: 245 FYEPVDYKKLKLPDYPKIITHPMDMGTVRQKLVDGKYSDPMEVQKDMELMFHNCYRYNPP 304
Query: 184 RSDVHVMAKTLLAKFEEKW 202
+ V AK L F + W
Sbjct: 305 SNSVVKAAKKLDTIFHKIW 323
>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
Length = 601
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 30/245 (12%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
++Q ++L+ + + W F PVDV L + DY+ +I PMD T+K ++ + Y +
Sbjct: 130 MKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 189
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
E DVRL F+NAM YN ++V+ A TL FE +W + K + + A
Sbjct: 190 EFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSSGTKSEPSNLATLAH 249
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRLS 283
D+ + + A + R L++ ++ T+E R KLG
Sbjct: 250 KDIAIPEPVAKKRKMNAVK-------------RNSLLEPAKRVMTDEDRVKLG------- 289
Query: 284 PEDLGKALEIVAQ--------SNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALKSQG 335
DLG E Q S+ ++ +E+E+D++ S L++L+ + L+
Sbjct: 290 -RDLGSLTEFPVQIINFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEFLRENQ 348
Query: 336 NNNNN 340
++N
Sbjct: 349 KKDSN 353
>gi|57282314|emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%)
Query: 102 EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
E ++++ IL + +HK W F PVD + LGL DY+++I +P+D T+K + Y
Sbjct: 190 ESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPIDLGTVKSNLAKNFYP 249
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREE 218
+ E DVRL F NA+ YN + V+ A+ LL +FE+ + L K+ + E R +
Sbjct: 250 SPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFRPLQDKMNKLEGGRRD 306
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 265 RKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLK 324
R + EEK KLG L L E + + ++I+ + N +E+ELD++A TLW L
Sbjct: 407 RVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 466
Query: 325 FFV 327
FV
Sbjct: 467 RFV 469
>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
972h-]
gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
Length = 578
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 105 IRQFGTILRNITQHKW---AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
+R T+L+ + + ++ A+PF QPVD DY++VI +PMD STI+ ++ EY
Sbjct: 257 MRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYS 316
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+ E +D+ L+F N YN + VHVM + L F+EKW
Sbjct: 317 TLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKW 357
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 58 SKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ 117
S+K+ S+ LK +EKE S+ K++ E + ++ + I+R + +
Sbjct: 47 SRKRDSSGATVGDLKQEEKE----SMPKKEPEPTVKKIRGSGMPPPQQKYCLAIVRQLKR 102
Query: 118 HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNA 177
K + PF PVD + DY ++ PMD TI+K++ + EY +E D+ L+F N
Sbjct: 103 TKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFSNC 162
Query: 178 MKYNDERSDVHVMAKTLLAKFEEKWLQL 205
YN S V M K L FE + QL
Sbjct: 163 FLYNGTESPVGSMGKALQEVFERQLKQL 190
>gi|326502374|dbj|BAJ95250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 22/230 (9%)
Query: 47 VNEIEQFYLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIR 106
V+ F +A+ + +GS L+ K R +P+ K + E S A +++
Sbjct: 108 VSRAPGFSSSAAPRAKKVQRGSHVLRG-AKGRFLPT--KPRPETSTVLPEAT-----ILK 159
Query: 107 QFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
Q IL+ + K++ F PVDV+ L + DY E+I PMD TIKK++++ Y + +
Sbjct: 160 QCEAILKKLMTQKFSHIFNVPVDVEKLNIPDYNEIIKHPMDLGTIKKKLDSGSYTSPSDF 219
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLD 226
DVRL F NA+ YN VH MA L FE +W K E++ A A +
Sbjct: 220 AADVRLTFNNAITYNPRGHAVHDMAIQLNKMFESRW-----------KTVEKKLASAAIK 268
Query: 227 MQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLG 276
+ D A +K R + + D+ +D +R + K K + EEK G
Sbjct: 269 PHVEVDRADSK--RRKTPPVDHSDLSIDCVRPTEIVKP-KMTFEEKESFG 315
>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
AltName: Full=Bromodomain-containing protein GTE11;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E11
gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
Length = 620
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 30/237 (12%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
++Q ++L+ + + W F PVDV L + DY+ +I PMD T+K ++ + Y +
Sbjct: 130 MKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 189
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
E DVRL F+NAM YN ++V+ A TL FE +W + K + + A
Sbjct: 190 EFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSSGTKSEPSNLATLAH 249
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRLS 283
D+ + + A + R L++ ++ T+E R KLG
Sbjct: 250 KDIAIPEPVAKKRKMNAVK-------------RNSLLEPAKRVMTDEDRVKLG------- 289
Query: 284 PEDLGKALEIVAQ--------SNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALK 332
DLG E Q S+ ++ +E+E+D++ S L++L+ + L+
Sbjct: 290 -RDLGSLTEFPVQIINFLRDHSSKEERSGDDEIEIDINDLSHDALFQLRDLFDEFLR 345
>gi|344231353|gb|EGV63235.1| Bromodomain-containing protein [Candida tenuis ATCC 10573]
Length = 503
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 97/184 (52%), Gaps = 15/184 (8%)
Query: 50 IEQFYLNASKKQGSNSKGSSTLKDK-EKERHVPSI----------RKQQQEASRREKAAE 98
E+ LN K+ + S+ S+ K + E + VPSI + +E + +
Sbjct: 119 FEKHMLNFPPKEANESELSTASKRRIESQSSVPSIASNRPKRNIHPPKPKELPYDNRPRK 178
Query: 99 KRMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
K+ +R IL+++ K + +PF+QPVD L + +Y ++I +PMD STI+ ++
Sbjct: 179 KKFAADLRFCNQILKDLISKKHFSYNFPFLQPVDAVALNIPNYSDIIKQPMDLSTIQSKL 238
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL-QLLPKVTEEEK 214
+Y+N E +DV L+F+N K+N E +DV +M L F++KW+ + +PK T +
Sbjct: 239 ANNQYENGDEFESDVTLMFENCYKFNPEGTDVSMMGHKLQDIFQKKWINRPIPKDTPQNS 298
Query: 215 RREE 218
E+
Sbjct: 299 DNED 302
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++N+ + K A PF++PVD+ L + YY + KPMD STI+K++ Y+ + D
Sbjct: 33 IKNVKRLKDAGPFLKPVDIIKLNIPFYYNFVPKPMDLSTIEKKLTVSAYEVPEQFIDDFN 92
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK------VTEEEKRREEEEA 221
L+ N +K+N E S + M K + A FE+ L PK ++ KRR E ++
Sbjct: 93 LMVSNCIKFNGENSPIAKMGKNIQAYFEKHMLNFPPKEANESELSTASKRRIESQS 148
>gi|195062991|ref|XP_001996293.1| GH22415 [Drosophila grimshawi]
gi|193899788|gb|EDV98654.1| GH22415 [Drosophila grimshawi]
Length = 309
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++++ H +A+PF QPV+ K L L DY+++I +PMD +TIKK++ Y + E D
Sbjct: 35 TVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANSYYWSATEAAAD 94
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+ L+F N YN DV +MAK L E +LQ + + +EE
Sbjct: 95 INLIFTNCSLYNKPTEDVIIMAKVL----ESVFLQAIKDMPKEE 134
>gi|357130613|ref|XP_003566942.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 215
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + QH AW F +PVDV LG+ DYY +I PMD T+ ++ Y + R DV
Sbjct: 40 LLDQLLQHDDAWVFDKPVDVYELGISDYYTMIPDPMDLGTVSSRLNRLRYADPRAFAEDV 99
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRR 216
RL F+NAM +NDE V+ A L FE W +L ++T + R
Sbjct: 100 RLTFRNAMTFNDEDDAVYKSAAELSRIFESGWASILVELTPPQLER 145
>gi|326434901|gb|EGD80471.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 905
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQH-KWAWPFMQPVDVKG 132
+ R +PS Q + RE K + EL + +H ++AWPF +PV
Sbjct: 324 RPPTRDLPSPANHPQTKALRE--CRKIISELFSK---------KHAEYAWPFYEPVKADE 372
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
LGL DY + +D PMD T+KK++E+ Y +V DVRLVF N KYN V MA
Sbjct: 373 LGLSDYRDFVDTPMDLGTVKKRIESGHYSDVDSFIADVRLVFSNCYKYNPSTDPVFGMAT 432
Query: 193 TLLAKFE 199
L FE
Sbjct: 433 KLHNVFE 439
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
W F QPVD K L + DY +I +PMD T+ K+++ + Y + +E D+ L+ N YN
Sbjct: 201 W-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSAQECIDDIHLMLNNCFVYN 259
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPK 208
+ VH+ A+ L F E+ L LP+
Sbjct: 260 PATNPVHIKARELETAF-ERCLHRLPQ 285
>gi|195063016|ref|XP_001996299.1| GH22418 [Drosophila grimshawi]
gi|193899794|gb|EDV98660.1| GH22418 [Drosophila grimshawi]
Length = 309
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+++++ H +A+PF QPV+ K L L DY+++I +PMD +TIKK++ Y + E D
Sbjct: 35 TVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANSYYWSATEAAAD 94
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+ L+F N YN DV +MAK L E +LQ + + +EE
Sbjct: 95 INLIFTNCSLYNKPTEDVIIMAKVL----ESVFLQAIKDMPKEE 134
>gi|448081188|ref|XP_004194827.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359376249|emb|CCE86831.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 645
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 57/86 (66%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ +++PF+ PVD L + +Y+E+I +PMD ST++ ++ +Y+N E DVRL+FKN
Sbjct: 335 HYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQYENGDEFERDVRLIFKN 394
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKW 202
+N E +DV++M L + F++KW
Sbjct: 395 CYTFNPEGTDVNMMGHRLESVFDKKW 420
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T ++ I + + A PF+ PVD L + YY I +PMD STI++++ Y++ ++ D
Sbjct: 162 TTIKAIKRLRDAGPFLHPVDTVKLNVPFYYNYIKRPMDLSTIERKLAVNAYEDPSQVVDD 221
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
L+ N +K+N E S + MAK A FE+ L + PKV
Sbjct: 222 FNLMVSNCIKFNGENSGISKMAKNTQAHFEKHMLNMPPKV 261
>gi|326434902|gb|EGD80472.1| hypothetical protein PTSG_13143 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PV LGL DY + +D PMD T+KK++E+ Y +V DVRLVF N K
Sbjct: 360 YAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGHYSDVDSFIADVRLVFSNCYK 419
Query: 180 YNDERSDVHVMAKTLLAKFE 199
YN V MA L FE
Sbjct: 420 YNPSTDPVFGMATKLHNVFE 439
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
W F QPVD K L + DY +I +PMD T+ K+++ + Y + +E D+ L+ N YN
Sbjct: 201 W-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERTYTSAQECIDDIHLMLNNCFVYN 259
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPK 208
+ VH+ A+ L F E+ L LP+
Sbjct: 260 PATNPVHIKARELETAF-ERCLHRLPQ 285
>gi|291243780|ref|XP_002741778.1| PREDICTED: bromodomain containing 2-like [Saccoglossus kowalevskii]
Length = 821
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H++AWPF PV+ LGL DY+++I PMD TIKK++E+ Y + ++ +D
Sbjct: 109 VMKAVWKHQFAWPFHAPVNPAELGLPDYFDIIKNPMDLGTIKKRLESNYYYSAKDCISDF 168
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L+F N YN DV +MA+ L F K Q+
Sbjct: 169 NLMFTNCYLYNKPGEDVVLMAQALEKLFLTKVAQM 203
>gi|348516624|ref|XP_003445838.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Oreochromis niloticus]
Length = 2378
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L + +H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y+N+ D
Sbjct: 2280 VLLAELERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQYQNLETFIID 2337
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
V LVF N K+N++ SD+ + FE++W +LL
Sbjct: 2338 VNLVFDNCEKFNEDNSDIGRAGHNMRKFFEKRWTELL 2374
>gi|66911387|gb|AAH97199.1| LOC100004566 protein [Danio rerio]
Length = 378
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
Query: 69 STLKDKEKERHVPSIRKQQQ---EASRREKAAEKRMEELIRQF--GTILRNITQHKWAWP 123
S L+ + E P+ Q + + R+ + + RM + QF +++ + +H +AWP
Sbjct: 217 SLLQSRRDELPAPNPHIAQSGPPQPAVRDPSRQGRMTNQL-QFLQKALVKTLWRHHFAWP 275
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F +PVD L L DYY +I +PMD TIKK++E Y++ E D +F N YN
Sbjct: 276 FHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNYYRSASECMQDFNTMFTNCYIYNKP 335
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
D+ +MA++L F +K Q +P+V EE
Sbjct: 336 TDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 363
>gi|224057449|ref|XP_002190567.1| PREDICTED: bromodomain testis-specific protein [Taeniopygia
guttata]
Length = 680
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
++R + +H ++WPF QPVD L L DYY +I KPMD TIKK++E Y E D
Sbjct: 38 VVMRAMWRHNFSWPFHQPVDAAALNLPDYYTIIKKPMDLGTIKKRLEHNYYTKAAECIED 97
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+ +F N YN D+ MA+ L F +K ++ P
Sbjct: 98 FKTMFWNCYMYNKSGDDIVFMAEELEKVFMQKIARMPP 135
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 105 IRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
++ IL+ + K +AWPF++P DV + P D TIKK+M+ EY
Sbjct: 285 LKHCNAILKELFSKKHAAYAWPFIKPEDVASASTGANQAIAKYPTDLGTIKKKMDNFEYN 344
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+++E TDVRL+F + K N ++ MA+ L FE
Sbjct: 345 DIQEFATDVRLMFMSCYKRNSSDHEIVAMARKLQDVFE 382
>gi|410968711|ref|XP_003990845.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Felis catus]
Length = 2171
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+G+ LK ++ E + SI +QE+S K ++ + + IL + H+ AWPF+
Sbjct: 2031 RGNKDLKKRKIEENT-SINLSKQESSTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 2089
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF N +N++ S
Sbjct: 2090 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFAVDVRLVFDNCETFNEDDS 2147
Query: 186 DVHVMAKTLLAKFEEKWLQLL 206
D+ ++ FE+KW +
Sbjct: 2148 DIGRAGHSMRKYFEKKWTDIF 2168
>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 904
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 54 YLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTIL- 112
YL A + + SKG +K + +P + K + R + +K++E++ G IL
Sbjct: 387 YLIAHFNEAAESKGFRKIKKEMIVDLLPELSKHKPAEYVR-RVPKKKVEKVDAMKGNILL 445
Query: 113 ------RNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
++ AWPF QPVD LG+ Y+++I +PMDF TI ++++ +Y+ + +
Sbjct: 446 ECKKIMTSLISDTDAWPFNQPVDPVALGIPTYFDIIKEPMDFGTINQKLKNGKYEVLAQF 505
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR 215
DV LVF NA+ +N+ SD+ AK L FE + +++ + EE++R
Sbjct: 506 ERDVHLVFANALLFNEPDSDIGYWAKKLRGLFERRLVRVHNMLKEEKER 554
>gi|444514374|gb|ELV10566.1| Bromodomain adjacent to zinc finger domain protein 2B [Tupaia
chinensis]
Length = 1028
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 109 GTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICT 168
G IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+
Sbjct: 930 GMILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFAL 987
Query: 169 DVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
DVRLVF N +N++ SD+ ++ FE+KW
Sbjct: 988 DVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 1021
>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 30/237 (12%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
++Q T+L+ + + W F PVD+ L + DY+ +I PMD T+K ++ + Y +
Sbjct: 127 MKQCETLLKRLMSQQHCWLFNTPVDMVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 186
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ 224
E DVRL F+NAM YN ++V+ A TL FE +W K + + A+
Sbjct: 187 EFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTFNKKSSGTKSEPSNLGTLAR 246
Query: 225 LDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKR-KLGAALTRLS 283
D+ + + A + ++ + L++ ++ T+E R KLG
Sbjct: 247 KDIAMPEPLAKKRKMNAVNH-------------DSLLEPAKRVMTDEDRVKLG------- 286
Query: 284 PEDLGKALEIVAQ--------SNTGFQATAEEVELDMDAQSESTLWRLKFFVKDALK 332
DLG E Q S+ ++ +E+E+D++ S L++L+ + L+
Sbjct: 287 -RDLGSLTEFPVQIINFLRDHSSKEGRSGDDEIEIDINDLSHDALFQLRDLFDEFLR 342
>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
protein DDB_G0293800
gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 806
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ + + K + F +PVD G+ DY++VI PMD TIK +++ Y +++ DV
Sbjct: 528 LINGMFKKKTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADV 587
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
RL+F+NA+ YN + S V AKTLL F++K+LQ P
Sbjct: 588 RLMFENALTYNADSSPVWKHAKTLLNAFDQKFLQNFP 624
>gi|296233153|ref|XP_002761896.1| PREDICTED: bromodomain-containing protein 4 [Callithrix jacchus]
Length = 985
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 91 SRREKAAEK--RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKP 145
S++ A EK ++ E ++ IL+ + K +AWPF +PVDV+ LGL DY ++I P
Sbjct: 338 SQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 397
Query: 146 MDFSTIK 152
MD STIK
Sbjct: 398 MDMSTIK 404
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 563 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 622
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 623 ELERYVTSCLR 633
>gi|47230592|emb|CAF99785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1679
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 72 KDKEKERHVPSIRKQQQEASRREKAAE--KRMEELIRQFGTILRNITQHKWAWPFMQPVD 129
K +E +P++ ++ + +R K A R L R +L + +H+ AWPF+ PV+
Sbjct: 1547 KAEESSPALPAVSQESPVSVKRAKTARDNNRDLGLCR---VLLAELERHQDAWPFLTPVN 1603
Query: 130 VKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHV 189
+K + Y +VI KPMDFSTI++++ + +Y+N+ DV LVF N ++N++ SD+
Sbjct: 1604 LKSV--PGYRKVIKKPMDFSTIREKLVSSQYQNLETFIIDVNLVFDNCERFNEDNSDIGR 1661
Query: 190 MAKTLLAKFEEKWLQLL 206
+ FE++W +LL
Sbjct: 1662 AGHNMRKFFEKRWTELL 1678
>gi|444524033|gb|ELV13688.1| Epoxide hydrolase 3 [Tupaia chinensis]
Length = 941
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
+++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E
Sbjct: 62 QLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKSPMDMGTIKKRLENNY 118
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 119 YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 150 TIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+K ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 204 PVKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 259
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 399 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 458
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 459 ELERYVTSCLR 469
>gi|345565069|gb|EGX48025.1| hypothetical protein AOL_s00081g352 [Arthrobotrys oligospora ATCC
24927]
Length = 890
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 110 TILRNI--TQH-KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
TI++ + QH A+PF PVD L + DY+++I KPMD S I++++ EY N E
Sbjct: 534 TIMKELWKKQHNSIAYPFYNPVDPVALEIPDYFKIIKKPMDMSEIQRKLNHNEYNNSNEF 593
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
D+RL+F N K+N S V+ K L A F+EKW Q
Sbjct: 594 EADIRLMFNNCYKFNPPSSPVYDCGKQLEAVFDEKWSQ 631
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L+NI + K A F+ PVD L L Y+E+I PM I+K++ A EY N E+ DV
Sbjct: 316 LKNIKRLKDAQAFLNPVDPVKLQLPTYFEIIKNPMSLFDIEKKLTANEYHNPAELKGDVH 375
Query: 172 LVFKNAMKYND-----ERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR 215
L+ +N++ +N +S +H+ K L A + +++ K + KR
Sbjct: 376 LMVQNSILFNGVEHAVTQSGIHIRDKYLHALEKMPPAEIISKSKPQPKR 424
>gi|261278845|pdb|3JVJ|A Chain A, Crystal Structure Of The Bromodomain 1 In Mouse Brd4
gi|261278846|pdb|3JVK|A Chain A, Crystal Structure Of Bromodomain 1 Of Mouse Brd4 In
Complex With Histone H3-K(Ac)14
gi|302566174|pdb|3MUK|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Propionylated
Histone H3- K(Prop)23
gi|302566176|pdb|3MUL|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Butyrylated
Histone H3- K(Buty)14
Length = 131
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 91 SRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFST 150
+ K +++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD T
Sbjct: 16 PNKPKRQTNQLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGT 72
Query: 151 IKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
IKK++E Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 73 IKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 123
>gi|410912905|ref|XP_003969929.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Takifugu rubripes]
Length = 2168
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y+N+ DV
Sbjct: 2071 LLAELERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQYQNLETFIIDV 2128
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
LVF N ++N++ SD+ + FE++W +LL
Sbjct: 2129 NLVFDNCERFNEDNSDIGRAGHNMRKFFEKRWTELL 2164
>gi|384493749|gb|EIE84240.1| hypothetical protein RO3G_08950 [Rhizopus delemar RA 99-880]
Length = 435
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 95 KAAEKRM---EELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDF 148
K E+R+ EE + G++++ + K A WPF +PVD G DYY++I +PMD
Sbjct: 142 KTPEERIDMSEEERKHIGSVIKEFKKPKHAHLTWPFERPVDAAAWGAADYYDIIKQPMDM 201
Query: 149 STIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
+TI+++ + +Y N E D +L+F+N KYN +VH++ K A F++ W
Sbjct: 202 ATIEEKWKQSKYANEDEFYNDYKLIFENCYKYNPPHHEVHLLGKKFEAAFDKYW 255
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
+++A E + R I + + +A PF+QPVD + DY+++I PMD STI+
Sbjct: 23 KDRAPEPMSPQDKRLVTGIFKKLWNCPFATPFLQPVDPVYFNIPDYFDIIKHPMDLSTIQ 82
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
K+++ +Y + E DV L+ N YN+ V A+ F+++ ++L E
Sbjct: 83 KKLD--DYHSKEEFIADVELMLNNCYLYNNPTDPVCDTAREFEKMFKKQLIKLRATPPAE 140
Query: 213 EKRREE 218
+K EE
Sbjct: 141 KKTPEE 146
>gi|297797327|ref|XP_002866548.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312383|gb|EFH42807.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 19/259 (7%)
Query: 81 PSIR----KQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLD 136
P +R + ++ SR + ++++ T+L + HK W F PVD L +
Sbjct: 143 PPVRNDKHRTKKGPSRLNVPTISTVASVMKECETLLNRLWSHKLGWAFRTPVDPVMLNIP 202
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DY+ VI PMD TI+ ++ EY + + DVRL F N++ YN + H MA+ +
Sbjct: 203 DYFTVIKHPMDLGTIRSRLRKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISK 262
Query: 197 KFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDEL 256
FE W + K+ + + A L+ ++ + A R+ S + E + ++
Sbjct: 263 YFETGWKSIEKKIPVTKPPVIPLTSSASLESEIPFEVAP---LRNKSAAMNESKLRVEPA 319
Query: 257 REMLVQKCRKTSTEEKRKLGAALTRLS---PEDLGKALEIVAQSNTGFQATAEEVELDMD 313
+ ++ + +EK+KL L L P+++ L QS + Q+ E+E+D++
Sbjct: 320 KLVM-------TDDEKKKLSQDLVALEEEFPQNISDLLR--EQSGSDGQSEEVEIEIDIE 370
Query: 314 AQSESTLWRLKFFVKDALK 332
S+ TL+ ++ + D L+
Sbjct: 371 TLSDETLFMVRKLLDDYLR 389
>gi|222618950|gb|EEE55082.1| hypothetical protein OsJ_02819 [Oryza sativa Japonica Group]
Length = 264
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 75 EKERHVPSIRKQQQEASRREKAA-EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
E++ H+P ++ A+ A + + + + G +L + +H+ W F +PVD + L
Sbjct: 22 ERKHHLPELQPPAVAAASPGVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARAL 81
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
L DYY I PMD T+++++E + Y + DVRL F NAM YN V+ A
Sbjct: 82 RLVDYYLRISDPMDLGTVRRRLERRRYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAE 141
Query: 194 LLAKFEEKWLQLL---PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTS----NEL 246
L FE W +L P+ + E++R +L + A RD N +
Sbjct: 142 LSEIFEAGWPSVLAAPPRPPDAERKRRLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGM 201
Query: 247 YEVDVH------LDELREMLVQKCRKTSTEEKRKLGA 277
EVD+ LDEL M+ + + K K GA
Sbjct: 202 MEVDLDRADSATLDELDRMVAEHGAALAGVVKVKQGA 238
>gi|296421346|ref|XP_002840226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636440|emb|CAZ84417.1| unnamed protein product [Tuber melanosporum]
Length = 825
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 57/311 (18%)
Query: 69 STLKDKEK-ERHVPSIR--KQQQEASRREKAAEKRMEELIRQFGTILRNITQ---HKWAW 122
ST D+ K E H P+ + RR+KAA + +R +L+ + + H A+
Sbjct: 427 STANDRPKREIHPPAPKDLPYSDVKPRRKKAASE-----LRFCDIVLKELHKKQYHDTAF 481
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF PVD L + DY+++I KPMD STI +++ +Y + + D+RL+F N K+N
Sbjct: 482 PFYVPVDPVALNIPDYFKIIKKPMDLSTISTKLKTNQYDSASDFEADIRLMFSNCYKFNP 541
Query: 183 ERSDVHVMAKTLLAKFEEKW----------------LQLLPKVTEEEKRREEEEAEAQ-- 224
VH K L F++KW + + P V +E++ +E+E Q
Sbjct: 542 SDQHVHKCGKALENIFDQKWAEKASYTRDNPGSHSPVSVSPPVEDEDEDMSGDESEDQEQ 601
Query: 225 ----LDMQL---------------------AQDAAHAKMARDTSNELYEVDVHLDELREM 259
L+ QL A +K L + R
Sbjct: 602 NIRLLEQQLEAMKDQISAMKNGQKKKKTPPATSTKRSKGGSSRKGSLVSTAPPANPSRPK 661
Query: 260 LV--QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATA-EEVELDMDAQS 316
+K + E+K +L + L + AL+++ ++ TA +E+ELD+D
Sbjct: 662 KGKEKKVPYITMEQKTELSERINFLPTGKMAYALKMIRENMPDLGNTADDEIELDIDELD 721
Query: 317 ESTLWRLKFFV 327
TL++L +V
Sbjct: 722 PQTLYKLHTYV 732
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
I+ ++R++ + K A PF PVD L + +Y+EVI PMD T++K++ KEY + R
Sbjct: 246 IKYLLVVIRSLRRTKDARPFTMPVDPIKLNVPNYFEVITNPMDLQTMEKKLNNKEYSSSR 305
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+ D L+ N + +N V + + A FE
Sbjct: 306 DFLADFNLILTNCVTFNGREHPVSENGRVMKAVFE 340
>gi|449802362|pdb|4DON|A Chain A, Brd4 Bromodomain 1 Complex With A Fragment
3,4-dihydro-3-methyl-2(1h)- Quinazolinon
Length = 145
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
+ K +++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIK
Sbjct: 34 KPKRQTNQLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIK 90
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
K++E Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 91 KRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 139
>gi|268576585|ref|XP_002643272.1| Hypothetical protein CBG08144 [Caenorhabditis briggsae]
Length = 414
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%)
Query: 116 TQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFK 175
+ + +PF PVD LGL DY+E+I KPMD ST+KK++ +EY N E D +L+
Sbjct: 137 SHSGYTFPFRTPVDTVALGLTDYHEIIKKPMDMSTMKKKIVGEEYDNAGEFKEDFKLMIN 196
Query: 176 NAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
N + YN++ V MA F KW ++ P
Sbjct: 197 NCLSYNNDGDPVSDMAIKFRKAFAAKWNKVFP 228
>gi|323448819|gb|EGB04713.1| hypothetical protein AURANDRAFT_17164, partial [Aureococcus
anophagefferens]
Length = 88
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 55/88 (62%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ + H+ +W FMQPVD L L DY+E+I PMD +IKK+ME YK + E DV
Sbjct: 1 VLKKLIDHECSWIFMQPVDPVELNLPDYFEIIKNPMDLGSIKKRMENNGYKLIAEFGADV 60
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKF 198
RL F NA+ YN SDV +A+ + + F
Sbjct: 61 RLTFDNAISYNGNGSDVCKVARDMKSTF 88
>gi|134105371|pdb|2OSS|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|308198555|pdb|3MXF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Jq1
gi|312208162|pdb|3P5O|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ibet Inhibitor
gi|340707484|pdb|2YEL|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|343197715|pdb|3SVF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Dihydro-Quinazolin Ligand
gi|343197716|pdb|3SVG|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-Dimethylisoxazol Ligand
gi|355333223|pdb|3ZYU|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|355333224|pdb|3ZYU|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|358009753|pdb|3U5J|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Alprazolam
gi|358009754|pdb|3U5K|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009755|pdb|3U5K|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009756|pdb|3U5K|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009757|pdb|3U5K|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009758|pdb|3U5L|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Benzo-Triazepine Ligand (Bzt-7)
gi|371927880|pdb|4A9L|A Chain A, N-Terminal Bromodomain Of Human Brd4 With 1,3-Dimethyl-6-(
Morpholine-4-Sulfonyl)-1,2,3,
4-Tetrahydroquinazolin-2-One
gi|372467090|pdb|3UVW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k5ack8ac)
gi|372467092|pdb|3UVY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k16ack20ac)
gi|374074443|pdb|3UVX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k12ack16ac)
gi|380259062|pdb|3UW9|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259063|pdb|3UW9|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259064|pdb|3UW9|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259065|pdb|3UW9|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|384482557|pdb|4E96|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Pfi-1
gi|404312911|pdb|4F3I|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ms417 Inhibitor
gi|409107327|pdb|4GPJ|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Isoxazolylbenzimidazole Ligand
gi|410563162|pdb|4HBV|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563164|pdb|4HBX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563165|pdb|4HBY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|449802776|pdb|4J0R|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
gi|449802777|pdb|4J0S|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
Length = 127
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 91 SRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFST 150
+ K +++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD T
Sbjct: 12 PNKPKRQTNQLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGT 68
Query: 151 IKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
IKK++E Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 69 IKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 119
>gi|353240913|emb|CCA72759.1| hypothetical protein PIIN_06697 [Piriformospora indica DSM 11827]
Length = 871
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 149/347 (42%), Gaps = 45/347 (12%)
Query: 26 VESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQG-----SNSKGSSTLKDKE----- 75
V LR+++ F K+ K +E++ ++K S + G +D
Sbjct: 428 VTQMALRMEEQFDKLMKNMPTADEVKPPAKPIARKPAPARRPSTAGGGFPRRDDSYVIAR 487
Query: 76 KERHVPSIRKQQQEASRRE---KAAEKRMEELIRQ--FGT-ILRNITQHKW---AWPFMQ 126
+R VP R+Q A R K KR + + Q F T ++ ++ + K+ A+PF +
Sbjct: 488 PKREVPPPREQYPVAPNRPVVKKRFPKRDDGTLEQLRFCTKLINDLYRPKYSSFAYPFYE 547
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSD 186
PVD L + Y +VI KPMD +T+ ++ EY N D +L+ KN +N +
Sbjct: 548 PVDYIKLEIPHYPKVIKKPMDMATMSSKLSNHEYPNATAFYNDFKLMIKNCFAFNPAGTP 607
Query: 187 VHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQ-----LDMQLAQDAAHAKMAR- 240
VH L A F+EKW L + + EE+E++A+ + M+ + H+ + +
Sbjct: 608 VHQAGVELNAVFDEKWQGLPNPYGDSDDGAEEDESDAERSNAVMMMEAQIQSLHSALEQL 667
Query: 241 -DTSNELYEVDVHLDELREMLVQKCRKT-------------------STEEKRKLGAALT 280
E ++ + + + K S E+K++L +
Sbjct: 668 KKPKKEKKPKNMGMPSMPKPPKAPSNKPPGAGGFKKKKKPTEDEDTLSFEQKKQLSETIQ 727
Query: 281 RLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
L L K LEI+ + + T+EE+ELD+D+ L RL FV
Sbjct: 728 TLDGNRLEKVLEIIDEVYPEIRETSEEIELDIDSLPSHVLNRLYNFV 774
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE--------YK 161
+I+R + + K A PF+ PVD L + Y ++I PMD ST++K++ + Y
Sbjct: 343 SIVRTLRKSKDAIPFLVPVDPVALNIPHYPQIITNPMDLSTVEKKLGGAKMDTAQYARYA 402
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
NV E D++L+ +N K+N V MA + +F +K ++ +P E
Sbjct: 403 NVDEFVADIKLIIENCAKFNGPEHPVTQMALRMEEQF-DKLMKNMPTADE 451
>gi|308489328|ref|XP_003106857.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
gi|308252745|gb|EFO96697.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
Length = 392
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
L+++F T + + +PF +PVD LGL DY+EVI KPMD ST+KK++ +EY+N
Sbjct: 125 LLKEF----EKTTHNAYTFPFRKPVDTVLLGLVDYHEVIKKPMDMSTMKKKLIGEEYENA 180
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEA 223
+ D +L+ +N + YN+E V +A F KW + P E++ EE EA
Sbjct: 181 EDFKKDFKLMIQNCLTYNNEGDPVSDLAIQFREAFAAKWKKEFP----EDEDTFVEEGEA 236
Query: 224 QLDMQL 229
Q D +
Sbjct: 237 QDDSTV 242
>gi|397640630|gb|EJK74224.1| hypothetical protein THAOC_04109 [Thalassiosira oceanica]
Length = 824
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 64/103 (62%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+I ++ ++R + +H+ W F VD LGL DY++VI+ PMD S ++K+++ YK+
Sbjct: 720 MIDKYFPLVRKMIEHENGWLFKDAVDPVELGLVDYFDVIETPMDLSLVEKKLKQGCYKSE 779
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
+DV+LVF NA+ +N E SDV V+AK +L F + L+
Sbjct: 780 AMFESDVKLVFNNAIVFNGEESDVGVIAKEMLGLFSSHFKNLI 822
>gi|431892496|gb|ELK02931.1| Bromodomain-containing protein 4 [Pteropus alecto]
Length = 1345
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H++AWPF QPVD L L DYY++I PMD TIKK++E Y N +E D
Sbjct: 69 VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQD 128
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F +K
Sbjct: 129 FNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++I PMD STIK ++EA+EY++ +E DVRL+F N KYN +V MA+ L FE
Sbjct: 392 DIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFE 451
Query: 200 EKWLQL 205
++ ++
Sbjct: 452 MRFAKM 457
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 263 KCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLW 321
KC+ S EEKR+L + +L E LG+ + I+ + + +E+E+D + STL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 322 RLKFFVKDALK 332
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|323449321|gb|EGB05210.1| hypothetical protein AURANDRAFT_38626 [Aureococcus anophagefferens]
Length = 873
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%)
Query: 125 MQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDER 184
MQPVD L L DY+++I PMD +IKK+ME YK++ E +DVRL F NA+ YN +
Sbjct: 1 MQPVDPVELNLPDYFDIIKNPMDLGSIKKRMENNCYKSISEFGSDVRLTFDNAISYNGDG 60
Query: 185 SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRR 216
SDV +A+ + A FE+ + ++ + EE+ R
Sbjct: 61 SDVCKVAREMKAVFEKLYHAMITSIEAEEEHR 92
>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 1578
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 72 KDKEKERH----VPSIRKQQQ----EASRREKAAEKRMEELIRQFGT---------ILRN 114
K K+K RH +P I+ + + R ++++ RM + +R +L
Sbjct: 691 KPKKKPRHSAPLIPQIKPRLPLNGGSSERAQRSSRGRMGKAMRDVVLTPVFKRCLDLLEE 750
Query: 115 ITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVF 174
+ +H+ + PF+ VD LG+ DY++VI PMD TIK + Y + + D RLVF
Sbjct: 751 LFEHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGGGYDTIDKFAEDCRLVF 810
Query: 175 KNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
NA YN + VH+MA++L FE+ + ++L
Sbjct: 811 SNAKTYNPSTNPVHIMAQSLEDVFEKGFPKVL 842
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 262 QKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNT-GFQATAEEVELDMDAQSESTL 320
+K K +TEEK KLGA +T+L + L L+I+ +N+ Q EV +D+ + L
Sbjct: 962 KKYPKVTTEEKTKLGAEITQLPVDLLPSILQIIHNTNSLPEQKPGSEVVIDLMKFDDDIL 1021
Query: 321 WRLKFFV 327
RL FV
Sbjct: 1022 RRLSKFV 1028
>gi|255071051|ref|XP_002507607.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226522882|gb|ACO68865.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 433
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQ------- 107
L+A +K + +K +K K R ++R +E SR + + + ++
Sbjct: 86 LSARRKTQNGAKKHEKMKPANKRRKQTALRDGDEEESRHGRGFDVDTQRIVSSSTPNKSL 145
Query: 108 --FGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY----- 160
F ILR + ++ +WPF +PVD + G+ DYYEVI PMDF TI + + +Y
Sbjct: 146 DPFPKILRKLMNNRLSWPFNEPVDAEYWGVQDYYEVIKTPMDFGTIATKYDIGDYNTENS 205
Query: 161 -KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+ TDVR VF NA YN V+ A+ L FE
Sbjct: 206 GHGALKFVTDVRQVFYNAWTYNQPGHQVYQYAQILARIFE 245
>gi|410563163|pdb|4HBW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazoline Ligand
Length = 127
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 91 SRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFST 150
+ K +++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD T
Sbjct: 12 PNKPKRETNQLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGT 68
Query: 151 IKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
IKK++E Y N +E D +F N YN D+ +MA+ L F +K
Sbjct: 69 IKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 119
>gi|68478269|ref|XP_716876.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
gi|68478390|ref|XP_716816.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438500|gb|EAK97830.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438562|gb|EAK97891.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
Length = 732
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 12/157 (7%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L + +Y E++ +PMD TI+ ++ EY+N + DVRLVFKN
Sbjct: 404 HYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYENADDFEKDVRLVFKN 463
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWL-QLLPK-------VTEEEKRREEEEAEAQLDMQ 228
+N E +DV++M L A F++KW + +P+ V++ E EEE+ +
Sbjct: 464 CYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNSDVSDREYSSEEEDNVEISEAM 523
Query: 229 LAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCR 265
L++ A M N++ + LDEL++ ++K R
Sbjct: 524 LSEIPAIQVM----ENQIIRMRKELDELKKEHLKKLR 556
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 60/97 (61%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + +++ A PF+ PVD L + YY I +PMD STI++++ K Y++V ++ D
Sbjct: 222 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEDVSQVVDDFN 281
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
L+ KN K+N E + + MA + A+FE+ +++ PK
Sbjct: 282 LMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPK 318
>gi|300176029|emb|CBK23340.2| unnamed protein product [Blastocystis hominis]
Length = 192
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 53/233 (22%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
M L+ Q IL Q+ + PF+QPV K GLDDY ++I +PMD T+ + +Y
Sbjct: 1 MASLLDQCKVILNEFLQNPDSKPFLQPVLWKEWGLDDYPKIIRQPMDLGTVNMHLTNGDY 60
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
K+V E D+RL+++N YN E SDV+ + K L FEE++ + EE+
Sbjct: 61 KDVYEFAYDMRLIWRNCCTYNQEISDVYKVGKKLSELFEERF-----------SKIEEQI 109
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALT 280
EA+ R+ S E+KR +L
Sbjct: 110 PEAE----------------------------------------REPSIEQKRLFVDSLF 129
Query: 281 RLSPEDLGKALEIVAQ-SNTGFQAT-AEEVELDMDAQSESTLWRLKFFVKDAL 331
+L P +L K L+I+ + + T + V++ +DA +T + +V+ L
Sbjct: 130 KLPPNELAKVLQIINERCESALDKTNPDLVDIIVDAIDIATFSVVNSYVQSCL 182
>gi|448531883|ref|XP_003870352.1| Bdf1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354706|emb|CCG24222.1| Bdf1 transcription factor [Candida orthopsilosis]
Length = 730
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 53/260 (20%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L L +Y+E++ +PMD TI+ ++ Y+N E D+RL+F+N
Sbjct: 394 HYNYNFPFLAPVDAVALNLPNYHEIVKEPMDLGTIQSKLTNNLYENADEFEKDIRLMFRN 453
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWL-QLLPKVTEEE---------KRREEEEAEAQLD 226
+N E +DV++M L A F++KW+ + +P+ T + EEE EA L
Sbjct: 454 CYAFNPEGTDVNMMGHRLEAIFDKKWVNKPVPEPTPQHSDASDYDFSSDEEEEITEAVLS 513
Query: 227 MQLAQDAAHAKMARDTSNELYEVDV-HLDELREM-------------------------- 259
A ++ R EL ++ HL +LRE
Sbjct: 514 EVPAIQFLENQLIR-MKEELDKMKAEHLKKLREQQAARRKRKKSQSGKRGSKSKRSREHS 572
Query: 260 -----------LVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAE-E 307
L + E K+++ A+ LS + L ++I+ Q T E E
Sbjct: 573 HTPLGHQNQIKLTPPQPVVTYEMKKQVSEAVPTLSDKKLNALIKIIQDD---VQITNEDE 629
Query: 308 VELDMDAQSESTLWRLKFFV 327
VELDMD +ST+ +L F+
Sbjct: 630 VELDMDQLGDSTVLKLYDFL 649
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ I + K A PF+ PVD L + YY I +PMD TI++++ A Y+ + ++ D
Sbjct: 213 IKAIKRLKDAVPFLAPVDTVKLNVPFYYNYIPRPMDLLTIERKINANAYEEISQVVDDFN 272
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
L+ N K+N E + + MA + A FE+ L + PK
Sbjct: 273 LMVDNCKKFNGEAAGISKMATNIQAHFEKHMLNVPPK 309
>gi|148922865|ref|NP_001092209.1| uncharacterized protein LOC561095 [Danio rerio]
gi|148744757|gb|AAI42905.1| Zgc:165617 protein [Danio rerio]
Length = 445
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + +H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y+N+ DV
Sbjct: 348 LLAELERHQDAWPFLNPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQYQNLETFIIDV 405
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
LVF N K+N++ SD+ + FE++W +LL
Sbjct: 406 NLVFDNCEKFNEDNSDIGRAGHNMRKFFEKRWTELL 441
>gi|345797221|ref|XP_856450.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Canis lupus familiaris]
Length = 2169
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2073 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFAVDV 2130
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
RLVF N +N++ SD+ ++ FE+KW +
Sbjct: 2131 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKWTDIF 2166
>gi|354544706|emb|CCE41432.1| hypothetical protein CPAR2_304210 [Candida parapsilosis]
Length = 748
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 53/260 (20%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L L +Y++++ +PMD TI+ ++ Y+N + DVRLVF+N
Sbjct: 404 HYNYNFPFLAPVDAVALNLPNYHDIVKEPMDLGTIQSKLTNNLYENADDFEKDVRLVFRN 463
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWL-QLLPKVTEEEKR---------REEEEAEAQLD 226
+N E +DV++M L A F++KW+ + +P+ T + EEE EA L
Sbjct: 464 CYAFNPEGTDVNMMGHRLEAIFDKKWVNKPVPEPTPQHSEASDDDFTSDEEEEITEAVLS 523
Query: 227 MQLAQDAAHAKMARDTSNELYEVDV-HLDELREM-------------------------- 259
A ++ R EL ++ HL +LRE
Sbjct: 524 EVPAIQFLENQLIR-MKEELEKMKADHLKKLREQQAARRKRKKAQSGKRGSKSKRSRERS 582
Query: 260 -----------LVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAE-E 307
L + E K+++ A+ LS + L ++I+ Q T E E
Sbjct: 583 HTPSGHQHQIKLTPPQPVVTYEMKKQVSEAVPTLSDKKLNALIKIIQDD---VQITNEDE 639
Query: 308 VELDMDAQSESTLWRLKFFV 327
VELDMD +ST+ +L F+
Sbjct: 640 VELDMDQLGDSTVLKLYDFL 659
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ I + K A PF+ PVD L + YY I +PMD STI++++ A Y+++ ++ D
Sbjct: 220 IKAIKRLKDAVPFLAPVDTVKLNVPFYYNYIPRPMDLSTIERKINANAYEDIAQVVDDFN 279
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
L+ +N K+N E + + MA + A FE+ L + PK
Sbjct: 280 LMVENCKKFNGEAAGISKMATNIQAHFEKHMLNVPPK 316
>gi|238882433|gb|EEQ46071.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 709
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 12/157 (7%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L + +Y E++ +PMD TI+ ++ EY+N + DVRLVFKN
Sbjct: 381 HYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNEYENADDFEKDVRLVFKN 440
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWL-QLLPK-------VTEEEKRREEEEAEAQLDMQ 228
+N E +DV++M L A F++KW + +P+ V++ E EEE+ +
Sbjct: 441 CYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNSDVSDREYSSEEEDNVEISEAM 500
Query: 229 LAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCR 265
L++ A M N++ + LDEL++ ++K R
Sbjct: 501 LSEIPAIQVM----ENQIIRMRKELDELKKEHLKKLR 533
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 60/97 (61%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + +++ A PF+ PVD L + YY I +PMD STI++++ K Y++V ++ D
Sbjct: 199 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYEDVSQVVDDFN 258
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
L+ KN K+N E + + MA + A+FE+ +++ PK
Sbjct: 259 LMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPK 295
>gi|62086391|dbj|BAD91553.1| bromodomain-containing protein [Mus musculus]
Length = 326
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y+ E D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ VMA+ L E+ ++Q L ++ +EE+
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQAL----EKLFMQKLSQMPQEEQ 137
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
++ E ++ IL+ + K +AWPF PVD LGL +YY+V+ PMD TIK
Sbjct: 267 KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|440789954|gb|ELR11245.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 119
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 54/84 (64%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L N+ +H++AWPF PVD LG+ DY +I +PMD +TI+ ++EA Y+ V DV
Sbjct: 9 LLTNLARHRYAWPFAHPVDYVALGVPDYPMIIQRPMDLATIRDKLEAGTYELVSAFLDDV 68
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL 194
+LV+ NA YN SDV +MA +
Sbjct: 69 QLVWSNAKVYNPPGSDVVIMADAM 92
>gi|327283518|ref|XP_003226488.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Anolis carolinensis]
Length = 2184
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2088 LLSELETHEDAWPFLLPVNLKHV--PGYRKVIKKPMDFSTIREKLNSGQYPNLEAFAVDV 2145
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
RLVF N +N++ SD+ + FE+KW ++
Sbjct: 2146 RLVFDNCETFNEDDSDIGRAGHNMRKHFEKKWTEIF 2181
>gi|291391605|ref|XP_002712247.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2B
[Oryctolagus cuniculus]
Length = 2168
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2072 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFAVDV 2129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2130 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2161
>gi|426221047|ref|XP_004004723.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Ovis aries]
Length = 2167
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+G LK ++ E + SI QQE+ K ++ + + IL + H+ AWPF+
Sbjct: 2027 RGVKDLKKRKMEENS-SINVPQQESFTSVKKPKREDSKDLALCSMILTEMETHEDAWPFL 2085
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF N +N++ S
Sbjct: 2086 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDS 2143
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2144 DIGRAGHSMRKYFEKKW 2160
>gi|120431733|ref|NP_001073342.1| bromodomain testis-specific protein isoform B [Mus musculus]
Length = 326
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y+ E D
Sbjct: 37 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 96
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ VMA+ L E+ ++Q L ++ +EE+
Sbjct: 97 FNTMFSNCYLYNKTGDDIVVMAQAL----EKLFMQKLSQMPQEEQ 137
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
++ E ++ IL+ + K +AWPF PVD LGL +YY+V+ PMD TIK
Sbjct: 267 KVTEQLKHCSEILKEMLAKKHLPYAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|22761009|dbj|BAC11417.1| unnamed protein product [Homo sapiens]
Length = 398
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 11 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 70
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 71 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 128
Query: 187 VHVMAKTLLAKFEEKWLQLL 206
++ M+ L A FEE +L
Sbjct: 129 IYSMSLRLSAFFEEHISSVL 148
>gi|326923162|ref|XP_003207809.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Meleagris gallopavo]
Length = 2126
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI+ ++ + +Y NV DV
Sbjct: 2030 ILSELETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLTSGQYPNVEAFSLDV 2087
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
RLVF N +N++ SD+ + FE+KW ++
Sbjct: 2088 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2123
>gi|401842077|gb|EJT44353.1| BDF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 634
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
N + + N +G+S + K + H P K + K K +++ R ILR +
Sbjct: 273 NDNNGESGNREGTSGGRPK-RTIHPPK-SKDLFDIYENSKPKSKTLQKKFRTCLKILRIL 330
Query: 116 TQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
K + +PF+QPVD L L +Y+E+I PMD TI + +YK V + DV L
Sbjct: 331 GSKKNSDINFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWKYKTVDQFINDVNL 390
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
VF N ++N E ++VH+M K L F WL+
Sbjct: 391 VFLNCFQFNPEGNEVHLMGKKLKELFSVHWLE 422
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF+ PVD L + Y+ + PMD S I K+++ Y +V ++ +D R + N +
Sbjct: 150 KDAKPFLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCL 209
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE-------EEKRREEEEAEAQLDMQLAQ 231
+N S V +MAK + FE K + P+V R++ E++++ L ++ +
Sbjct: 210 SFNGLESSVSLMAKRIQIYFERKLSAMPPRVLPASALKKTSRSRKKNEDSDSPLVIRRSV 269
Query: 232 DAAH 235
AA+
Sbjct: 270 SAAN 273
>gi|431894841|gb|ELK04634.1| Bromodomain adjacent to zinc finger domain protein 2B [Pteropus
alecto]
Length = 2135
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2039 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLESFALDV 2096
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2097 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2128
>gi|62945212|dbj|BAD97681.1| open reading frame X [Mus musculus]
Length = 387
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 44 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 103
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ A+
Sbjct: 104 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAAGAQ 163
Query: 223 AQLDMQLA 230
Q+A
Sbjct: 164 NAGSQQVA 171
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
++ E +R +ILR + K +AWPF +PVD + L L DY+++I PMD ST+K
Sbjct: 306 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
>gi|145353027|ref|XP_001420833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581068|gb|ABO99126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 904
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
R + R+ + + +I R++ HK A+ F++PVD + DY+EVI PMD TIK
Sbjct: 402 RGRPKGGRVATPLTRIKSIHRSLMVHKNAYIFLRPVDPVYWEIPDYFEVIKNPMDLGTIK 461
Query: 153 KQMEAKEY--KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
++++A Y KNV DVRLV+ NAM YN + + V MA+ + +FE +W
Sbjct: 462 ERIDAGYYDEKNVEAYAADVRLVWSNAMTYNKDDTPVFKMARIMSREFEYQW 513
>gi|45382753|ref|NP_990008.1| bromodomain adjacent to zinc finger domain protein 2B [Gallus gallus]
gi|22653663|sp|Q9DE13.1|BAZ2B_CHICK RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=Extracellular matrix protein F22
gi|11526817|gb|AAG36791.1|AF224275_1 extracellular matrix protein F22 [Gallus gallus]
Length = 2130
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI+ ++ + +Y NV DV
Sbjct: 2034 ILSELETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLTSGQYPNVEAFSLDV 2091
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
RLVF N +N++ SD+ + FE+KW ++
Sbjct: 2092 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2127
>gi|47201045|emb|CAF89147.1| unnamed protein product [Tetraodon nigroviridis]
Length = 378
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+++I +PMD STIK++M+ +EY + ++ DVRL+F N K
Sbjct: 268 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNREYLDSQQFAADVRLMFSNCYK 327
Query: 180 YNDE 183
YN
Sbjct: 328 YNPP 331
>gi|321456598|gb|EFX67701.1| hypothetical protein DAPPUDRAFT_261209 [Daphnia pulex]
Length = 200
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L + ++ AWPF +PVD K LGL DY++VI PMD T+ K++E Y + + D
Sbjct: 43 TVLPALWDYRHAWPFHEPVDTKKLGLIDYFQVIKFPMDLGTVMKRLENHYYWSALDCIRD 102
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQL 229
+ ++F N YND + D+ M + L F + L +PKV EE E Q+ Q
Sbjct: 103 INILFANCYTYNDPKEDLVWMGQQLEKIFRRQ-LARMPKVEMEENSTPGLATEKQIGPQA 161
Query: 230 AQDAAHAKMARDTS 243
+ A ++ T
Sbjct: 162 SATQADPDVSSTTG 175
>gi|329664076|ref|NP_001192347.1| bromodomain adjacent to zinc finger domain protein 2B [Bos taurus]
gi|296490606|tpg|DAA32719.1| TPA: bromodomain adjacent to zinc finger domain, 2B [Bos taurus]
Length = 2167
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2071 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2128
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2129 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2160
>gi|344268059|ref|XP_003405881.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Loxodonta africana]
Length = 2169
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2073 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2130
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2131 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2162
>gi|440898818|gb|ELR50241.1| Bromodomain adjacent to zinc finger domain protein 2B [Bos grunniens
mutus]
Length = 2166
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2070 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2127
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2128 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2159
>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 89
Score = 82.8 bits (203), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+ ++ H W F PVD LGL DY+EVI PMD T+KK++E Y+++ E+ D+
Sbjct: 2 LLKGLSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLENGLYRSINEVEVDI 61
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKF 198
L F NAM YN E S V MAK L KF
Sbjct: 62 NLTFDNAMLYNPEGSVVWSMAKELKDKF 89
>gi|156847379|ref|XP_001646574.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
gi|156117252|gb|EDO18716.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
Length = 605
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
K K++++ ++ T+++ + K+A +PF++PVD L L Y+E+I P+D TI
Sbjct: 213 KPKSKKLQQAMKFCQTVVKELANKKYASFNYPFLEPVDPVALNLPTYFEIIKNPIDLGTI 272
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
K++ EYK++ E TD++L+F N K+N E + V++M L + KW
Sbjct: 273 SKKLNNWEYKSMEEFETDIKLMFDNCFKFNPEGTIVNMMGHRLEEVYNSKW 323
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF+ PVD L + Y+ I +PMD STI++++ A Y+ +I +D L+ N + +N
Sbjct: 78 PFILPVDPAALNIPYYFNKITRPMDLSTIERKLNANAYETPEQISSDFNLMVDNCIVFNG 137
Query: 183 ERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK--RREEEEAEAQLDMQLAQ 231
S + MA+ + A FE+ L + K E K RR++ + + + ++ AQ
Sbjct: 138 PTSMIAQMARNIQAAFEKHMLNMPAKDEEPPKQQRRKKTDEDTPVVIRRAQ 188
>gi|301779808|ref|XP_002925321.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Ailuropoda melanoleuca]
Length = 2169
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2073 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFAVDV 2130
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
RLVF N +N++ SD+ + FE+KW +
Sbjct: 2131 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2166
>gi|428180935|gb|EKX49800.1| hypothetical protein GUITHDRAFT_67457 [Guillardia theta CCMP2712]
Length = 117
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 103 ELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN 162
E +++ IL+ + HK W F +PVD L + DY E+I KPMD T++ ++ N
Sbjct: 7 EWVKKCIGILKVLKNHKHGWVFSEPVDPVKLNIPDYLEIIKKPMDLGTVRTHLDNGTITN 66
Query: 163 VREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVT 210
E T+V L F NAM+YN DVH+MAKT L + + + LP VT
Sbjct: 67 PEEFKTNVVLTFDNAMRYNPSNHDVHIMAKT-LKEVRTRLVAKLPPVT 113
>gi|355561856|gb|EHH18488.1| hypothetical protein EGK_15100 [Macaca mulatta]
Length = 1465
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 92/165 (55%), Gaps = 18/165 (10%)
Query: 42 KLEERVNEIEQFYLNASK-----KQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKA 96
+LE R +E F + K ++ ++ G+ST K K+ H P R + + S +A
Sbjct: 908 RLENRFYRLEPFDVATIKGKLEEEKDADVPGTSTRKRKD---HQPRRRLRNRAQSYDIQA 964
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+K+ EEL L I Q + + PF QPVD+ L DY ++ID PMDF+T+++ +E
Sbjct: 965 WKKQCEEL-------LNLIFQCEDSEPFRQPVDL--LEYPDYRDIIDTPMDFATVRETLE 1015
Query: 157 AKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEE 200
A Y++ E+C DVRL+F N+ Y +RS ++ M+ L A FEE
Sbjct: 1016 AGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEE 1060
>gi|345328056|ref|XP_001512551.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Ornithorhynchus anatinus]
Length = 2183
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS K ++ E ++P +Q+ S +K ++L IL + H+ AWPF+
Sbjct: 2043 RGSKDPKKRKMEENIPVTLIKQESFSPLKKPKRDDSKDLAL-CSMILTEMETHEDAWPFL 2101
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF N +N++ S
Sbjct: 2102 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDS 2159
Query: 186 DVHVMAKTLLAKFEEKWLQLL 206
D+ + FE+KW +
Sbjct: 2160 DIGRAGHNMRKYFEKKWTDIF 2180
>gi|355748714|gb|EHH53197.1| hypothetical protein EGM_13785 [Macaca fascicularis]
Length = 1465
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 92/165 (55%), Gaps = 18/165 (10%)
Query: 42 KLEERVNEIEQFYLNASK-----KQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKA 96
+LE R +E F + K ++ ++ G+ST K K+ H P R + + S +A
Sbjct: 908 RLENRFYRLEPFDVATIKGKLEEEKDADVPGTSTRKRKD---HQPRRRLRNRAQSYDIQA 964
Query: 97 AEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
+K+ EEL L I Q + + PF QPVD+ L DY ++ID PMDF+T+++ +E
Sbjct: 965 WKKQCEEL-------LNLIFQCEDSEPFRQPVDL--LEYPDYRDIIDTPMDFATVRETLE 1015
Query: 157 AKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEE 200
A Y++ E+C DVRL+F N+ Y +RS ++ M+ L A FEE
Sbjct: 1016 AGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEE 1060
>gi|345328058|ref|XP_003431230.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Ornithorhynchus anatinus]
Length = 2128
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS K ++ E ++P +Q+ S +K ++L IL + H+ AWPF+
Sbjct: 1988 RGSKDPKKRKMEENIPVTLIKQESFSPLKKPKRDDSKDLAL-CSMILTEMETHEDAWPFL 2046
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF N +N++ S
Sbjct: 2047 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDS 2104
Query: 186 DVHVMAKTLLAKFEEKWLQLL 206
D+ + FE+KW +
Sbjct: 2105 DIGRAGHNMRKYFEKKWTDIF 2125
>gi|281337460|gb|EFB13044.1| hypothetical protein PANDA_014792 [Ailuropoda melanoleuca]
Length = 2122
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2026 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFAVDV 2083
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
RLVF N +N++ SD+ + FE+KW +
Sbjct: 2084 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2119
>gi|395846680|ref|XP_003796028.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Otolemur garnettii]
Length = 2146
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2050 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2107
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2108 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2139
>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1579
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD LGL DY+++I PMD STIK ++E ++Y+ +E DVRL+F N K
Sbjct: 458 YAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKVKLENRQYREPQEFAADVRLMFSNCYK 517
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL 205
YN +V MA+ L FE ++ ++
Sbjct: 518 YNPPDHEVVAMARKLQDVFEMRFAKM 543
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 39/153 (25%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL------------------- 133
R K +++ L++ +L+ + +H++AWPF PVD L
Sbjct: 36 RPKRQTNQLQFLLKM---VLKTLWKHQFAWPFHAPVDAVKLNLPVSVAPRDCSHLDIQYK 92
Query: 134 -------------GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
L DYY +I PMD TIKK++E Y N +E D +F N Y
Sbjct: 93 YYTQFCEVNCQMQSLQDYYTIIKTPMDMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIY 152
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
N D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 153 NKPGDDIVLMAEAL----EKVFLQKVTEMPQEE 181
>gi|301607445|ref|XP_002933311.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 2138
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 82 SIRKQQQEASRREKAAEKRMEEL--IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYY 139
S+ +QE+S K A EEL + IL + H+ AWPF+ PV++K + Y
Sbjct: 2011 SLSPSKQESSPSSKKARSAKEELKDLSLCSVILSEMESHEDAWPFLLPVNLKLV--PGYK 2068
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+VI KPMDF+TI+ ++ +Y + DVRLVF N +N++ S++ + FE
Sbjct: 2069 KVIKKPMDFATIRDKLSNGQYPSFEAFALDVRLVFNNCETFNEDESEIGRAGHKMRVHFE 2128
Query: 200 EKWLQLL 206
++W +L
Sbjct: 2129 KRWTELF 2135
>gi|301607447|ref|XP_002933312.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 2088
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
Query: 82 SIRKQQQEASRREKAAEKRMEEL--IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYY 139
S+ +QE+S K A EEL + IL + H+ AWPF+ PV++K + Y
Sbjct: 1961 SLSPSKQESSPSSKKARSAKEELKDLSLCSVILSEMESHEDAWPFLLPVNLKLV--PGYK 2018
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+VI KPMDF+TI+ ++ +Y + DVRLVF N +N++ S++ + FE
Sbjct: 2019 KVIKKPMDFATIRDKLSNGQYPSFEAFALDVRLVFNNCETFNEDESEIGRAGHKMRVHFE 2078
Query: 200 EKWLQLL 206
++W +L
Sbjct: 2079 KRWTELF 2085
>gi|66357154|ref|XP_625755.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein
with the following architecture:
chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum
Iowa II]
gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein
with the following architecture:
chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum
Iowa II]
Length = 2270
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K+ PF++PVD G DYY VI +PMDF+T++ ++ + Y +E +DV+ +F N
Sbjct: 434 KYGIPFLRPVDPNMDGASDYYSVISRPMDFTTVQTKLYLRIYSQPQEFWSDVQQIFTNCF 493
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQ--LLPKVTEEE--KRREEEEAEAQLDMQ 228
YN SD++V K L A F++ + + LL + T+E+ K++ EE + LD Q
Sbjct: 494 HYNSVDSDIYVQGKLLKALFDKLYGEWALLSRQTQEDLVKQKSEESPKEWLDDQ 547
>gi|7020972|dbj|BAA91336.1| unnamed protein product [Homo sapiens]
Length = 707
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 171 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 230
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 231 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 288
Query: 187 VHVMAKTLLAKFEEKWLQLL 206
++ M+ L A FEE +L
Sbjct: 289 IYSMSLRLSAFFEEHISSVL 308
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 70 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYMEHNTRTFNEP 127
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 128 GSPIVKSAK 136
>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
Length = 466
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+++ +H+++WPF QPVD L L DYY++I PMD STI+K++E Y + D
Sbjct: 40 VLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F EK
Sbjct: 100 NTMFTNCYIYNKPGDDIVLMAQELEKAFMEK 130
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF + DV L DY + + PMD TI+ +ME YK+ ++ +DVRL+F N K
Sbjct: 311 YAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYKDTQDFASDVRLMFMNCYK 368
Query: 180 YNDERSDVHVMAKTLLAKFE 199
YN ++V MA+ L FE
Sbjct: 369 YNPPDNEVVNMARKLQDVFE 388
>gi|449670051|ref|XP_002170910.2| PREDICTED: uncharacterized protein LOC100207323 [Hydra
magnipapillata]
Length = 637
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 11/136 (8%)
Query: 89 EASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDF 148
E +R K + + EL +Q IL + H+ AWPF+ PV+ K +YY+VI PMDF
Sbjct: 468 EEEQRHKIKQPKDMELCKQ---ILSEMDSHEHAWPFLVPVNNKQF--PEYYQVIKHPMDF 522
Query: 149 STIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP- 207
TI+ ++ +YKN + D RLVFKN +N++ S+V K + FE++WL+L
Sbjct: 523 QTIENKLRENQYKNREDFAKDTRLVFKNCNIFNEDFSEVGKAGKIMSRFFEKRWLELCSG 582
Query: 208 -----KVTEEEKRREE 218
+VT++EK E
Sbjct: 583 DKKQHQVTKKEKTSNE 598
>gi|324504882|gb|ADY42105.1| Homeotic protein female sterile [Ascaris suum]
Length = 696
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L +T+H+ AWPF+ PVD L + DY+ V+ +PMD +TI K+++ Y + E D
Sbjct: 100 VLDPLTRHQHAWPFISPVDAVKLNIPDYHNVVKRPMDLNTIGKRLQNSYYFSAEECMHDF 159
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+F N +YN + DV +M K + ++ EK L+LLP
Sbjct: 160 ETIFANCYEYNRKEDDVWLMCKNIENEYREK-LKLLP 195
>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
Length = 465
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L+++ +H+++WPF QPVD L L DYY++I PMD STI+K++E Y + D
Sbjct: 40 VLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDF 99
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ +MA+ L F EK
Sbjct: 100 NTMFTNCYIYNKPGDDIVLMAQELEKAFMEK 130
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF + DV L DY + + PMD TI+ +ME YK+ ++ +DVRL+F N K
Sbjct: 311 YAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKMENGLYKDTQDFASDVRLMFMNCYK 368
Query: 180 YNDERSDVHVMAKTLLAKFE 199
YN ++V MA+ L FE
Sbjct: 369 YNPPDNEVVNMARKLQDVFE 388
>gi|50413693|ref|XP_457302.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
gi|49652967|emb|CAG85306.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
Length = 639
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 115/242 (47%), Gaps = 33/242 (13%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L + +Y EV+ +PMD TI+ ++ +Y+N E DVRLVFKN
Sbjct: 329 HYNYNFPFLAPVDTVALNIPNYAEVVKEPMDLGTIQTKLANNQYENGDEFERDVRLVFKN 388
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWL-QLLPKVTEEEKRREEEEAEAQLDMQLAQDAAH 235
+N E +DV++M L + F++KW+ + +P+ T ++ E + ++ +
Sbjct: 389 CYAFNPEGTDVNMMGHRLESIFDKKWVNRPVPQPTPANSDLDDSSDEDDDEPEINESMLS 448
Query: 236 AKMA-RDTSNELYEVDVHLDELREMLVQKCRK---------------------------- 266
+ A + N+L + LDEL++ + K R+
Sbjct: 449 SVPAIQFLENQLIRMKQELDELKKQHLDKLREQRDAKRKRKRSKKSKSRKNSSVEHPNQP 508
Query: 267 -TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKF 325
+ E K+++ + L+ + L ++I+ + EEVELDMD + T+ +L
Sbjct: 509 TVTYEMKKQVSEMVPNLTDKKLQSLVKIIKDDVD--LSNEEEVELDMDQLEDRTVLKLYN 566
Query: 326 FV 327
F+
Sbjct: 567 FL 568
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + + + A PF+ PVD+ L + YY I +PMD STI++++ A Y+ I D
Sbjct: 156 VIKAVKRLRDAGPFVHPVDIVKLNIPFYYNYIPRPMDLSTIERKINANAYEEPSRIVEDF 215
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
L+ N K+N E+S + MAK + A FE+ L + PKV
Sbjct: 216 NLMVANCCKFNGEQSGISKMAKNVQAHFEKHMLNMPPKV 254
>gi|301608560|ref|XP_002933843.1| PREDICTED: bromodomain-containing protein 3 [Xenopus (Silurana)
tropicalis]
Length = 1013
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY++I PMD STI+K++E Y + D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ VM++ L F EK ++
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEM 134
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF + V L D + I PMD +TI+ +ME YK+ ++ +DVRL+F N+ K
Sbjct: 312 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYK 369
Query: 180 YNDERSDVHVMAKTLLAKFE 199
YN ++V MA+ + FE
Sbjct: 370 YNPPDNEVVNMARKMQDVFE 389
>gi|67604075|ref|XP_666591.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis TU502]
gi|54657614|gb|EAL36361.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis]
Length = 2267
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K+ PF++PVD G DYY VI +PMDF+T++ ++ + Y +E +DV+ +F N
Sbjct: 434 KYGIPFLRPVDPNMDGASDYYSVISRPMDFTTVQTKLYLRIYSQPQEFWSDVQQIFTNCF 493
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQ--LLPKVTEEE--KRREEEEAEAQLDMQ 228
YN SD++V K L A F++ + + LL + T+E+ K++ EE + LD Q
Sbjct: 494 HYNSVDSDIYVQGKLLKALFDKLYGEWALLSRQTQEDLVKQKSEESPKEWLDDQ 547
>gi|410979451|ref|XP_003996097.1| PREDICTED: bromodomain-containing protein 3 [Felis catus]
Length = 695
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENSYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREEEEAE 222
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+ +
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPAGGTQ 164
Query: 223 AQLDMQLA 230
+ Q+A
Sbjct: 165 SAGTQQVA 172
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
K+M+++EY + + D+RL+F N KYN +V MA+ L FE ++ ++
Sbjct: 331 KKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 383
>gi|402888433|ref|XP_003907566.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Papio anubis]
Length = 2131
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2035 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2092
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2093 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2124
>gi|417406892|gb|JAA50086.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2074
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 1934 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 1992
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 1993 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 2050
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2051 DIGRAGHSMRKYFEKKW 2067
>gi|241955217|ref|XP_002420329.1| bromodomain-containing transcription factor, putative; protein
involved in transcription initiation at TATA-containing
promoters, putative [Candida dubliniensis CD36]
gi|223643671|emb|CAX41404.1| bromodomain-containing transcription factor, putative [Candida
dubliniensis CD36]
Length = 721
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L + +Y E++ PMD TI+ ++ EY+N + DVRLVFKN
Sbjct: 391 HYNYNFPFLAPVDTVALNIPNYNEIVKHPMDLGTIQSKLANNEYENADDFEKDVRLVFKN 450
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKW 202
+N E +DV++M L A F++KW
Sbjct: 451 CYLFNPEGTDVNMMGHRLEAVFDKKW 476
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + +++ A PF+ PVD L + YY I +PMD STI++++ K Y+NV ++ D
Sbjct: 207 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLKAYENVSQVVDDFN 266
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
L+ KN K+N E + + MA + A+FE+ +++ PK
Sbjct: 267 LMVKNCKKFNGEAAGISKMAMNIQAQFEKLMVKVPPK 303
>gi|348585937|ref|XP_003478727.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 2 [Cavia porcellus]
Length = 2198
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+G+ LK ++ E + SI +QE+ K +++ + + IL + H+ AWPF+
Sbjct: 2058 RGNKELKKRKMEENT-SINVSKQESFTSVKKSKRDDSKDLTLCSMILNEMETHEDAWPFL 2116
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ +Y N+ DVRLVF N +N++ S
Sbjct: 2117 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSNGQYPNLETFAVDVRLVFDNCETFNEDDS 2174
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2175 DIGRAGHSMRKYFEKKW 2191
>gi|417406931|gb|JAA50104.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2206
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 2066 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 2124
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 2125 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 2182
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2183 DIGRAGHSMRKYFEKKW 2199
>gi|119631811|gb|EAX11406.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_c [Homo
sapiens]
Length = 2231
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2107 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2164
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2165 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2196
>gi|417406914|gb|JAA50097.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2143
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 2003 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 2061
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 2062 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 2119
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2120 DIGRAGHSMRKYFEKKW 2136
>gi|410348356|gb|JAA40782.1| bromodomain adjacent to zinc finger domain, 2B [Pan troglodytes]
Length = 2176
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ +Y N+ DV
Sbjct: 2080 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSGGQYPNLETFALDV 2137
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2138 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2169
>gi|402218827|gb|EJT98902.1| Bromodomain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 824
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKW---AWPFMQPVDVKGLGLD 136
VP +++ + RE+ + +E ++ ++L+++ + + A+PF PVD L +
Sbjct: 419 VPGKKRRSGKGKGRER--DDGTQEQLKFCASVLQHLFKKSYYSAAYPFYDPVDYVALNIP 476
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
DY ++I KPMD ST+KK++E+K Y+N +E D +L+ KN YN +S V + L
Sbjct: 477 DYPKIIKKPMDLSTMKKKLESKTYENAQEFHADFKLMIKNCRLYNPAQSPVREAGEELNR 536
Query: 197 KFEEKWLQLLP 207
F+EKW L P
Sbjct: 537 IFDEKWKGLPP 547
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 19/115 (16%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM---------------- 155
+R + +++ A PF++PVD GL + Y+ VI PMD T+++++
Sbjct: 226 IRQLKKNRDAAPFLKPVDTVGLNIPHYHNVIKHPMDLGTVEEKLALSNPAVKSKQSGSAT 285
Query: 156 ---EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+K Y E DVRL+ NA+K+N E V MAK LL F+++ ++ P
Sbjct: 286 ESDPSKRYWTADEFVADVRLIVDNAIKFNGEAHVVSQMAKRLLEIFDKQAERMPP 340
>gi|224056313|ref|XP_002187748.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Taeniopygia guttata]
Length = 2125
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI+ ++ + +Y N+ DV
Sbjct: 2029 ILSELETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLSSGQYPNLEAFSLDV 2086
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
RLVF N +N++ SD+ + FE+KW ++
Sbjct: 2087 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2122
>gi|417406900|gb|JAA50090.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2108
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 1968 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 2026
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 2027 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 2084
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2085 DIGRAGHSMRKYFEKKW 2101
>gi|365761633|gb|EHN03272.1| Bdf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
N + + N +G+S + K + H P K + K K +++ R ILR +
Sbjct: 268 NDNSGESGNREGTSGGRPK-RTIHPPK-SKDLFDIYENSKPKSKTLQKKFRTCLKILRIL 325
Query: 116 TQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRL 172
K + +PF+QPVD L L +Y+E+I PMD TI + +YK V + D+ L
Sbjct: 326 GSKKNSDINFPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWKYKTVDQFINDLNL 385
Query: 173 VFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
VF N ++N E ++VH+M K L F WL+
Sbjct: 386 VFLNCFQFNPEGNEVHLMGKKLKELFSVHWLE 417
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF+ PVD L + Y+ + PMD S I K+++ Y +V ++ +D R + N +
Sbjct: 145 KDAKPFLNPVDPIALNIPHYFNYVQTPMDLSLIGKKLQESTYHSVEQVKSDFRTMVNNCL 204
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE-------EEKRREEEEAEAQLDMQLAQ 231
+N S V +MAK + FE K + P+V R++ E++++ L ++ +
Sbjct: 205 SFNGLESSVSLMAKRIQIYFERKLSAMPPRVLPASALKKTSRSRKKNEDSDSPLVIRRSV 264
Query: 232 DAAH 235
AA+
Sbjct: 265 SAAN 268
>gi|417406918|gb|JAA50099.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2172
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 2032 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 2090
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 2091 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 2148
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2149 DIGRAGHSMRKYFEKKW 2165
>gi|397500603|ref|XP_003820998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
paniscus]
Length = 2168
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ +Y N+ DV
Sbjct: 2072 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSGGQYPNLETFALDV 2129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2130 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2161
>gi|332234004|ref|XP_003266198.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Nomascus leucogenys]
Length = 2167
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2071 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2128
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2129 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2160
>gi|348585935|ref|XP_003478726.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 1 [Cavia porcellus]
Length = 2170
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+G+ LK ++ E + SI +QE+ K +++ + + IL + H+ AWPF+
Sbjct: 2030 RGNKELKKRKMEENT-SINVSKQESFTSVKKSKRDDSKDLTLCSMILNEMETHEDAWPFL 2088
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ +Y N+ DVRLVF N +N++ S
Sbjct: 2089 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSNGQYPNLETFAVDVRLVFDNCETFNEDDS 2146
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2147 DIGRAGHSMRKYFEKKW 2163
>gi|94681063|ref|NP_038478.2| bromodomain adjacent to zinc finger domain protein 2B [Homo sapiens]
gi|229462995|sp|Q9UIF8.3|BAZ2B_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=hWALp4
gi|119631809|gb|EAX11404.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631810|gb|EAX11405.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631812|gb|EAX11407.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|162319380|gb|AAI56488.1| Bromodomain adjacent to zinc finger domain, 2B [synthetic construct]
Length = 2168
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2072 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2130 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2161
>gi|29421196|dbj|BAA96000.2| KIAA1476 protein [Homo sapiens]
Length = 2142
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2046 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2103
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2104 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2135
>gi|301113438|ref|XP_002998489.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111790|gb|EEY69842.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 910
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+ EL + +L+ + ++ W F PVD + DY+++I PMD TIKK++EA+ Y
Sbjct: 104 ITELKNRLMPLLQKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHY 163
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE-----EKR 215
+V DVRLVF+N + YN + ++ AK LLA F + L ++ ++ E+R
Sbjct: 164 NSVEAFAGDVRLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQLFKRCEQR 223
Query: 216 REE 218
REE
Sbjct: 224 REE 226
>gi|297264141|ref|XP_002808049.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B-like [Macaca mulatta]
Length = 2188
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2064 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2121
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2122 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2153
>gi|417406856|gb|JAA50069.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2011
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 1871 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 1929
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 1930 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 1987
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 1988 DIGRAGHSMRKYFEKKW 2004
>gi|126326221|ref|XP_001366439.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Monodelphis domestica]
Length = 2180
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2084 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYSNLETFALDV 2141
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2142 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2173
>gi|417414064|gb|JAA53334.1| Putative chromatin remodeling complex wstf-iswi large subunit,
partial [Desmodus rotundus]
Length = 2092
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 1952 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 2010
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 2011 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 2068
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2069 DIGRAGHSMRKYFEKKW 2085
>gi|410035848|ref|XP_525949.4| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
troglodytes]
Length = 2198
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ +Y N+ DV
Sbjct: 2102 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSGGQYPNLETFALDV 2159
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2160 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2191
>gi|417406880|gb|JAA50080.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2045
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 1905 RGSKDLKKRKMEENT-SINLSKQESFASVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 1963
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N DVRLVF N +N++ S
Sbjct: 1964 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYLNPESFALDVRLVFDNCETFNEDDS 2021
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2022 DIGRAGHSMRKYFEKKW 2038
>gi|403258938|ref|XP_003921998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Saimiri boliviensis boliviensis]
Length = 2170
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2074 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2131
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2132 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2163
>gi|390464478|ref|XP_002806959.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Callithrix jacchus]
Length = 2178
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 2082 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2139
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2140 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2171
>gi|6683500|dbj|BAA89212.1| bromodomain adjacent to zinc finger domain 2B [Homo sapiens]
Length = 1972
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 1876 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 1933
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 1934 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 1965
>gi|39644723|gb|AAH08909.2| PHIP protein, partial [Homo sapiens]
Length = 805
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 269 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 328
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 329 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 386
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 387 IYSMSLRLSAFFEE 400
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 168 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 225
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 226 GSPIVKSAK 234
>gi|348670161|gb|EGZ09983.1| hypothetical protein PHYSODRAFT_460736 [Phytophthora sojae]
Length = 924
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+ EL + +L + ++ W F PVD + DY+++I PMD TIKK++EA+ Y
Sbjct: 110 VAELKTRLMPLLTKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEHY 169
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE-----EKR 215
+V DVRLVF+N + YN + ++ AK LLA F + L ++ ++ E+R
Sbjct: 170 NSVEAFAGDVRLVFENCIAYNSSTNKFNIAAKQLLASFNKSLASLKNQLEKQLFKRCEQR 229
Query: 216 REE 218
REE
Sbjct: 230 REE 232
>gi|351711943|gb|EHB14862.1| Bromodomain adjacent to zinc finger domain protein 2B [Heterocephalus
glaber]
Length = 2168
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ +Y N+ DV
Sbjct: 2072 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSNGQYPNLETFAVDV 2129
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2130 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2161
>gi|14164429|dbj|BAB55682.1| P0047B08.5 [Oryza sativa Japonica Group]
Length = 370
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 75 EKERHVPSIRKQQQEASRREKAA-EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
E++ H+P ++ A+ A + + + + G +L + +H+ W F +PVD + L
Sbjct: 147 ERKHHLPELQPPAVAAASPGVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARAL 206
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
L DYY I PMD T+++++E + Y + DVRL F NAM YN V+ A
Sbjct: 207 RLVDYYLRISDPMDLGTVRRRLERRRYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAE 266
Query: 194 LLAKFEEKWLQLL---PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTS----NEL 246
L FE W +L P+ + E++R +L + A RD N +
Sbjct: 267 LSEIFEAGWPSVLAAPPRPPDAERKRRLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGM 326
Query: 247 YEVDV------HLDELREMLVQ 262
EVD+ LDEL M+ +
Sbjct: 327 MEVDLDRADSATLDELDRMVAE 348
>gi|259090118|pdb|2WP2|A Chain A, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide.
gi|259090119|pdb|2WP2|B Chain B, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide
Length = 120
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY +I PMD +TIKK++E K Y+ E D
Sbjct: 21 VVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIED 80
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ VMA+ L E+ ++Q L ++ +EE
Sbjct: 81 FNTMFSNCYLYNKTGDDIVVMAQAL----EKLFMQKLSQMPQEE 120
>gi|432110957|gb|ELK34430.1| Bromodomain testis-specific protein, partial [Myotis davidii]
Length = 842
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 12/110 (10%)
Query: 100 RMEELIRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMD-------FS 149
++ E +R IL+ + K +AWPF PVDV LGL +YY+++ PMD F+
Sbjct: 222 KVTEPLRHCSEILKELFAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGNPEFLFT 281
Query: 150 TIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+K M+ +EYK+ E DVRL+F N +YN +V MA+ L FE
Sbjct: 282 ILK--MDNQEYKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFE 329
>gi|255732041|ref|XP_002550944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131230|gb|EER30790.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 730
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L + +Y E++ +PMD TI+ ++ EY+N + DVRLVFKN
Sbjct: 392 HYNYNFPFLAPVDTVALNIPNYREIVKEPMDLGTIQTKLTNNEYENGDQFEKDVRLVFKN 451
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKW 202
+N E +DV++M L A F++KW
Sbjct: 452 CYAFNPEGTDVNMMGHRLEAVFDKKW 477
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 61/98 (62%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ I +++ A PF+ PVD L + YY I +PMD STI++++ K Y++V +I D
Sbjct: 216 VIKVIKRNREAVPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKINLKAYEDVSQIIDDF 275
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
L+ KN K+N E + + MA + A+FE+ +++ PK
Sbjct: 276 NLMVKNCKKFNGEAAGISKMASNIQAQFEKHMVKVPPK 313
>gi|426337492|ref|XP_004032738.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Gorilla gorilla gorilla]
Length = 2090
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 1994 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 2051
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 2052 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2083
>gi|395732421|ref|XP_002812584.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Pongo abelii]
Length = 2004
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DV
Sbjct: 1908 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDV 1965
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ + FE+KW
Sbjct: 1966 RLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 1997
>gi|365991080|ref|XP_003672369.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
gi|343771144|emb|CCD27126.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
Length = 733
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
K K++++ ++ +IL+ +T K A +PF++PVD L L YY+ + +PMD TI
Sbjct: 348 KPKSKKLQQAMKFCQSILKELTNKKHASFNYPFLEPVDPVALNLPTYYDYVKEPMDLGTI 407
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
K++ EY+ + + DVRLVFKN +N + + V++M L F KW
Sbjct: 408 SKKLNNWEYETMDQFGDDVRLVFKNCYAFNPDGTIVNMMGHRLEEVFNNKW 458
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + + K A PF++PVD+ L + YY + +PMD STI+K++ Y +I D
Sbjct: 192 IKAVKRLKDARPFLKPVDIVALNIPFYYNYVPRPMDLSTIEKKLNVNAYSEPEQITDDFN 251
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK--VTEEEKRREEEEAEAQLDMQL 229
L+ N++K+N + + MA+ + A FE+ L + K T K + A ++ +
Sbjct: 252 LMVNNSIKFNGPTAVISQMARNIQAAFEKHMLNMAAKDXFTPTTKPKGRGNANSKKAATI 311
Query: 230 AQDAA 234
QDA
Sbjct: 312 DQDAP 316
>gi|389751720|gb|EIM92793.1| Bromodomain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 25/152 (16%)
Query: 54 YLNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILR 113
Y +A KK +SKGS E+ +H K +++L R+
Sbjct: 407 YADAPKKARKSSKGSKGTNGAEQLKHC-----------------GKILDQLGRK------ 443
Query: 114 NITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLV 173
+ H PF QPVD LG+ DY ++I KPMD ST++ ++E+ +Y + D +L+
Sbjct: 444 --SHHTIVAPFAQPVDPISLGIPDYPKIIKKPMDLSTMRTKLESGQYASADRFRDDFKLM 501
Query: 174 FKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
N YN + S VH L FEEKW +
Sbjct: 502 ISNCFAYNSDTSPVHKAGVELQKLFEEKWGHM 533
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 107 QFGT-ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK------- 158
+F T +R + + K A PF PVD L + Y +VI +PMDFSTI++++ +
Sbjct: 225 KFATSTIRTLKKLKDAGPFKFPVDPLALNIPHYPQVIKEPMDFSTIERKLASSNPVKPDP 284
Query: 159 -----EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
Y N E TDVR +F+N + +N + + + A F+++ Q+
Sbjct: 285 DPTHARYYNAEEFITDVRRIFQNCLTFNGPDHAITQSGRRVEATFDKQIKQM 336
>gi|355750561|gb|EHH54888.1| hypothetical protein EGM_03990 [Macaca fascicularis]
Length = 2371
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+G+ LK ++ E + SI +QE+ K ++ + + IL + H+ AWPF+
Sbjct: 2226 RGNKDLKKRKMEENT-SINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFL 2284
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF N +N++ S
Sbjct: 2285 LPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDS 2342
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ + FE+KW
Sbjct: 2343 DIGRAGHNMRKYFEKKW 2359
>gi|426225993|ref|XP_004007141.1| PREDICTED: uncharacterized protein LOC101109872 [Ovis aries]
Length = 589
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 45 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 104
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRRE 217
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 105 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKP 159
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 149 STIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++K+M+++EY + + D+RL+F N KYN +V MA+ L FE
Sbjct: 330 CVLQKKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFE 380
>gi|170284622|gb|AAI61214.1| Unknown (protein for IMAGE:8889270) [Xenopus (Silurana) tropicalis]
Length = 356
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 42 VVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSANECMQDF 101
Query: 171 RLVFKNAMKYNDERSDVHVMAKTL-------LAKFEEKWLQLLPKVTEEEKRREE 218
+F N YN D+ +MA+ L +A+ ++ ++LLP + + R+
Sbjct: 102 NTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPAPKGKGRKPP 156
>gi|308810150|ref|XP_003082384.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
gi|116060852|emb|CAL57330.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAA--EKRMEELIRQFGTIL 112
L K GS + S D + E+ P +Q ++RR ++A + RM+ +I
Sbjct: 539 LRGKKPNGSGAVSSDENGDADNEQVEP-----RQTSARRGRSATPQSRMQ-------SIH 586
Query: 113 RNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKN-VREICTDVR 171
R I +K A+ F++PVD + DY++VI PMD TI ++E +EY+N DVR
Sbjct: 587 RIIMTNKNAYMFLKPVDPVYWEIPDYFDVIKNPMDLGTIMTKLEKREYENQPSAYAADVR 646
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
LV+ NAM YN E V+ MA+ + +FE +W
Sbjct: 647 LVWSNAMTYNKEEEPVYKMARIMSREFEYQW 677
>gi|119569104|gb|EAW48719.1| pleckstrin homology domain interacting protein, isoform CRA_c [Homo
sapiens]
Length = 845
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 309 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 368
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 369 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 426
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 427 IYSMSLRLSAFFEE 440
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 208 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 265
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 266 GSPIVKSAK 274
>gi|297597282|ref|NP_001043715.2| Os01g0648700 [Oryza sativa Japonica Group]
gi|55296880|dbj|BAD68333.1| PSTVd RNA-biding protein-like [Oryza sativa Japonica Group]
gi|255673505|dbj|BAF05629.2| Os01g0648700 [Oryza sativa Japonica Group]
Length = 238
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 75 EKERHVPSIRKQQQEASRREKAA-EKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
E++ H+P ++ A+ A + + + + G +L + +H+ W F +PVD + L
Sbjct: 22 ERKHHLPELQPPAVAAASPGVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARAL 81
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT 193
L DYY I PMD T+++++E + Y + DVRL F NAM YN V+ A
Sbjct: 82 RLVDYYLRISDPMDLGTVRRRLERRRYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAE 141
Query: 194 LLAKFEEKWLQLL---PKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTS----NEL 246
L FE W +L P+ + E++R +L + A RD N +
Sbjct: 142 LSEIFEAGWPSVLAAPPRPPDAERKRRLSGLLPRLPVGAQVTVAEIMKKRDGCLREVNGM 201
Query: 247 YEVDVH------LDELREMLVQ 262
EVD+ LDEL M+ +
Sbjct: 202 MEVDLDRADSATLDELDRMVAE 223
>gi|320166235|gb|EFW43134.1| hypothetical protein CAOG_08266 [Capsaspora owczarzaki ATCC 30864]
Length = 1162
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 81 PSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQ---HKWAWPFMQPVD-VKGLGLD 136
P+ Q+ S++E+A + ++ G L+ IT A PFM+PVD +K L+
Sbjct: 501 PNAFGGQRRMSKQERAVSALTTKQLKFCGDTLKFITSGSNQGLANPFMEPVDPIKHHALN 560
Query: 137 DYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLA 196
Y+E+I PMDF TI+++ K Y N + DVRLVF N + YN V MA+ L A
Sbjct: 561 -YHEIIKNPMDFGTIQRRFRQKYYTNALDFADDVRLVFSNCLLYNPPDHFVADMARKLSA 619
Query: 197 KFEEKWLQL 205
FE ++L L
Sbjct: 620 IFETRFLSL 628
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
KW F +PVD+ L Y EVI+ PMDFSTI+ ++ + Y + D+ LVF N
Sbjct: 391 KW---FHKPVDLNKL--PHYREVIETPMDFSTIRARINSGYYPDAEACRKDIELVFSNCF 445
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
KYN +V V + + A +E KV EE+K
Sbjct: 446 KYNAPGDNVTVAGEQVKAHYE--------KVLEEKK 473
>gi|51859384|gb|AAH81569.1| PHIP protein [Homo sapiens]
Length = 845
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 309 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 368
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 369 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 426
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 427 IYSMSLRLSAFFEE 440
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 208 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 265
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 266 GSPIVKSAK 274
>gi|395519612|ref|XP_003763937.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B,
partial [Sarcophilus harrisii]
Length = 1045
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 3/140 (2%)
Query: 63 SNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAW 122
S KG+ K ++ E +V SI +QE+ K ++ + + IL + H+ AW
Sbjct: 902 SQKKGNKDPKKRKMEENV-SINLLKQESFTSIKKPKRDDSKDLALCSMILTEMETHEDAW 960
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF N +N+
Sbjct: 961 PFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYSNLETFALDVRLVFDNCETFNE 1018
Query: 183 ERSDVHVMAKTLLAKFEEKW 202
+ SD+ + FE+KW
Sbjct: 1019 DDSDIGRAGHNMRKYFEKKW 1038
>gi|17551634|ref|NP_508124.1| Protein F13C5.2 [Caenorhabditis elegans]
gi|351061577|emb|CCD69431.1| Protein F13C5.2 [Caenorhabditis elegans]
Length = 374
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 110 TILRNI---TQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREI 166
+IL+ T + +PF +PVDV LGL DY+EVI KPMD STI+K++ +EY E
Sbjct: 124 SILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYDTAVEF 183
Query: 167 CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
D +L+ N + YN+E V A KF KW + P
Sbjct: 184 KEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKWKKEFP 224
>gi|426020769|sp|F7DRV9.1|BRDT_XENTR RecName: Full=Bromodomain testis-specific protein
Length = 933
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY++I PMD STI+K++E Y + D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ VM++ L F EK
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVFMEK 130
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF + V L D + I PMD +TI+ +ME YK+ ++ +DVRL+F N+ K
Sbjct: 302 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYK 359
Query: 180 YNDERSDVHVMAKTLLAKFE 199
YN ++V MA+ + FE
Sbjct: 360 YNPPDNEVVNMARKMQDVFE 379
>gi|327270741|ref|XP_003220147.1| PREDICTED: bromodomain testis-specific protein-like [Anolis
carolinensis]
Length = 900
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H ++WPF QPVD GL L DYY +I PMD +TI+K++E Y E +
Sbjct: 81 VVMKAMWRHSFSWPFHQPVDAAGLKLPDYYNIIKNPMDLTTIQKRLEHNYYTCAAECIEN 140
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL-----LPKVTEEEKRREEEEAEAQ 224
+ +F N YN D+ MA+ L F +K Q+ + + + +++R+ E Q
Sbjct: 141 FKTMFANCYLYNKPGDDIVFMAQELEKVFMQKIAQMPLEEKIIVINQGKRKRKTTEVAEQ 200
Query: 225 LDMQLAQ 231
D + Q
Sbjct: 201 SDASIPQ 207
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 117 QHK-WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFK 175
QH+ +AW F +P+DV GL+DY +V+ PMD TIKK+ME YK+ +E D+RL+F
Sbjct: 332 QHEAYAWLFYKPIDVTAPGLEDYNDVVKCPMDLGTIKKKMENNAYKDTQEFAADIRLMFM 391
Query: 176 NAMKYNDERSDVHVMAKTLLAKFE 199
N +Y+ +V MA+ L FE
Sbjct: 392 NCYRYSSPDQEVVTMARKLQDVFE 415
>gi|12007334|gb|AAG45145.1| IRS-1 PH domain binding protein PHIP variant 9 [Homo sapiens]
Length = 862
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 326 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 385
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 386 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 443
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 444 IYSMSLRLSAFFEE 457
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 225 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 282
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 283 GSPIVKSAK 291
>gi|426353811|ref|XP_004044374.1| PREDICTED: PH-interacting protein [Gorilla gorilla gorilla]
Length = 1810
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1274 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1333
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1334 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1391
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1392 IYSMSLRLSAFFEE 1405
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1173 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1230
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1231 GSPIVKSAK 1239
>gi|332824558|ref|XP_527628.3| PREDICTED: PH-interacting protein [Pan troglodytes]
Length = 1799
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1263 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1322
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1323 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1380
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1381 IYSMSLRLSAFFEE 1394
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1162 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1219
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1220 GSPIVKSAK 1228
>gi|403214547|emb|CCK69048.1| hypothetical protein KNAG_0B06180 [Kazachstania naganishii CBS
8797]
Length = 654
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKG 132
+E H P + ++R K+ K++++ ++ ++++ +T K+A +PF++PVD
Sbjct: 262 REIHPPKSKDIYPYENKRPKS--KKLQQAMKYCVSVVKELTNKKYASFNYPFLEPVDPVS 319
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
+ L Y++ + +PMD TI K++ EY+ + E D+RLVFKN +N + + V++M
Sbjct: 320 MNLPTYFDYVKEPMDLGTISKKLSNWEYQTMEEFEADIRLVFKNCYSFNPDGTIVNMMGH 379
Query: 193 TLLAKFEEKW 202
L F KW
Sbjct: 380 RLEEVFNSKW 389
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + + K A PF+QPVD L L Y+ I +PMD ST+++++ Y+ + D
Sbjct: 127 IKAVKRLKDAKPFLQPVDTVALNLPLYFNYIKRPMDLSTVERKLNLNAYETPESVTEDFN 186
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL----LPKVTEEEKRREEEEA 221
L+ N +K+N S + MA+ + A FE+ L + P + ++ K R++++
Sbjct: 187 LMVDNCVKFNGPASAIAQMARNIQASFEKHMLNMPAKDAPVIIQQNKSRKKKKG 240
>gi|392571704|gb|EIW64876.1| Bromodomain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 749
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 50/260 (19%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ A PF +PVD +G+ +Y +V+ KPMD +T+KK+++A EY + D RL+ KN
Sbjct: 419 HYTIAHPFYEPVDPVKMGIPEYPKVVKKPMDLATMKKKLDAGEYSTAEKFREDFRLMVKN 478
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHA 236
M +N + VH K L FEEKW L R E+++ + + + + A
Sbjct: 479 CMTFNPPGNPVHEAGKALQVLFEEKWKNL-------PSPRPYEDSDDEEEEEEGSEDERA 531
Query: 237 KMARDTSNELYEVDVHLDEL---------------------------------REMLVQK 263
+M D ++ + HL L + K
Sbjct: 532 RMIADMETQIENMKNHLASLKRPAKEKKEKKKEKPPKPTPPVASTSKPTPKQTKAPPAPK 591
Query: 264 CRKT----------STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMD 313
+KT + E+K+ L +++L L + ++I+ + + + EE+EL++D
Sbjct: 592 GKKTKKPVTDDDVLTFEQKKDLSDTISKLDGAKLERVIQIIHEGVPEIRDSTEEIELEID 651
Query: 314 AQSESTLWRLKFFVKDALKS 333
+ L +L FV LK
Sbjct: 652 QLPAAVLTKLYNFVIRPLKP 671
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA------------ 157
+ +R + + K + PF+ PVD LG+ Y +I PMDFS+I++++
Sbjct: 209 STVRTLKRMKDSGPFLNPVDPVALGIPHYPTIIKHPMDFSSIERKLTTSNPAKPDPNPAN 268
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
Y +V +I D+RL+F N + +N V M K + A F+++ Q+
Sbjct: 269 PRYGSVDDIVADIRLIFANCLTFNGPDHPVTQMGKRVEAVFDKQVKQM 316
>gi|50978459|emb|CAH10776.1| hypothetical protein [Homo sapiens]
Length = 917
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 381 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 440
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 441 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 498
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 499 IYSMSLRLSAFFEE 512
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 280 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 337
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 338 GSPIVKSAK 346
>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1359
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 109 GTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME---AKEYKNVRE 165
G +L + ++ W F PVD L L DY+E+I PMD T+ +++ A Y E
Sbjct: 420 GAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEE 479
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREE 218
DV+LVF NAMKYN S+V+ +A+ + +F + W L ++ EE R+E
Sbjct: 480 FAADVQLVFDNAMKYNGPESEVYPVAERMKKEFNKDWALALKRMEAEENGRKE 532
>gi|358366386|dbj|GAA83007.1| transcription regulator Bdf1 [Aspergillus kawachii IFO 4308]
Length = 835
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L + +A PF PVD L + Y+ +I KPMDFST++ ++ A +Y+N +E D+R
Sbjct: 490 LHKPKHYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQYENAKEFELDMR 549
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
L+ KN K+N ++ + L +F +KW Q
Sbjct: 550 LILKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 582
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
+ +PVD L + Y + I +PMD TI+K+++ Y+ + + D L+ +NA+ +N
Sbjct: 305 YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKLKNNNYRTAQAVIDDFNLMVQNALTFNGP 364
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRR 216
V + L F +K + LP+ E E+++
Sbjct: 365 DHLVAQEGQKLKITF-DKQMANLPRADEVEEKK 396
>gi|308153472|sp|Q8WWQ0.2|PHIP_HUMAN RecName: Full=PH-interacting protein; Short=PHIP; AltName: Full=IRS-1
PH domain-binding protein; AltName: Full=WD
repeat-containing protein 11
Length = 1821
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1285 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1344
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1345 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1402
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 IYSMSLRLSAFFEE 1416
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1242 GSPIVKSAK 1250
>gi|410262916|gb|JAA19424.1| pleckstrin homology domain interacting protein [Pan troglodytes]
gi|410305482|gb|JAA31341.1| pleckstrin homology domain interacting protein [Pan troglodytes]
Length = 1821
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1285 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1344
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1345 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1402
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 IYSMSLRLSAFFEE 1416
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1242 GSPIVKSAK 1250
>gi|397468397|ref|XP_003805873.1| PREDICTED: PH-interacting protein [Pan paniscus]
Length = 1802
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1266 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1325
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1326 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1383
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1384 IYSMSLRLSAFFEE 1397
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1165 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1222
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1223 GSPIVKSAK 1231
>gi|187952627|gb|AAI37489.1| Pleckstrin homology domain interacting protein [Homo sapiens]
Length = 1821
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1285 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1344
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1345 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1402
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 IYSMSLRLSAFFEE 1416
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1242 GSPIVKSAK 1250
>gi|34996489|ref|NP_060404.3| PH-interacting protein [Homo sapiens]
gi|17976800|emb|CAC83118.1| WD repeat domain 11 protein [Homo sapiens]
gi|118175870|gb|ABK76299.1| pleckstrin homology domain-interacting protein variant 1 [Homo
sapiens]
gi|119569103|gb|EAW48718.1| pleckstrin homology domain interacting protein, isoform CRA_b [Homo
sapiens]
Length = 1821
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1285 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1344
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1345 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1402
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 IYSMSLRLSAFFEE 1416
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1242 GSPIVKSAK 1250
>gi|317038280|ref|XP_001401977.2| transcription regulator BDF1 [Aspergillus niger CBS 513.88]
Length = 835
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L + +A PF PVD L + Y+ +I KPMDFST++ ++ A +Y+N +E D+R
Sbjct: 490 LHKPKHYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQYENAKEFELDMR 549
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
L+ KN K+N ++ + L +F +KW Q
Sbjct: 550 LILKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 582
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
+ +PVD L + Y + I +PMD TI+K+++ Y+ + + D L+ +NA+ +N
Sbjct: 305 YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKLKNNVYRTAQAVIDDFNLMVQNALTFNGP 364
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRR 216
V + L F +K + LP+ E E+++
Sbjct: 365 DHLVAQEGQKLKITF-DKQMANLPRADEVEEKK 396
>gi|328863827|gb|EGG12926.1| hypothetical protein MELLADRAFT_46486 [Melampsora larici-populina
98AG31]
Length = 339
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 111 ILRNITQ---HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREIC 167
+LR + + K+ WPF +PVD LG+ +Y +I KPMD STIK++++ EYK
Sbjct: 95 VLREVNKKAYEKFVWPFYEPVDPVKLGVPEYLTIIKKPMDLSTIKQKLDRGEYKAGAAFA 154
Query: 168 TDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
D RL+ N +N + V+ K L FE+KW
Sbjct: 155 ADFRLMLNNCFTFNPVGTPVYNFGKQLECLFEQKW 189
>gi|194222248|ref|XP_001916271.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Equus caballus]
Length = 2170
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y ++ DV
Sbjct: 2074 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYPSLEAFALDV 2131
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2132 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2163
>gi|260943750|ref|XP_002616173.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
gi|238849822|gb|EEQ39286.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
Length = 613
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 43/244 (17%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+PF+QPVD L + +Y++++ +PMD +I+ ++ +Y+N E DVRLVFKN +N
Sbjct: 304 FPFLQPVDPVALNIPNYFDIVKEPMDLGSIQTKLANNQYENGDEFEKDVRLVFKNCYLFN 363
Query: 182 DERSDVHVMAKTLLAKFEEKWL-QLLPKVTE-----EEKRREEEEAEAQLDMQLAQDAAH 235
E +DVH M + L F++KW + +P T E+ +++ E +++ + +
Sbjct: 364 PEGNDVHSMGQRLEQVFDKKWANKPVPAATPTHSENEDSSDYDDDDEPEINEAMLSNIPA 423
Query: 236 AKMARDTSNELYEVDVHLDELREMLVQKCRK----------------------------- 266
+ N+L + LDEL++ ++K R+
Sbjct: 424 IQF---LENQLVRMKKELDELKKQHLEKLREQRDAKRKKRKSKKAKKARSSSVAEAGVES 480
Query: 267 ---TSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRL 323
+ E K+++ + L+ + L ++I+ + + EEVELDMD + T+ +L
Sbjct: 481 QPVVTYEMKKQVSEIVPTLNDKKLQALIKII--KDDVVISDEEEVELDMDQLEDRTVLKL 538
Query: 324 KFFV 327
F+
Sbjct: 539 YNFL 542
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ I + + A PF+ PVDV L + YY I +PMD STI++++ Y++ ++ D
Sbjct: 127 IKAIKRLRDAGPFLHPVDVVKLNVPLYYNYIKRPMDLSTIERKLNLNAYEDPSQVVDDFN 186
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
L+ N +++N E S + MAK + A+FE+ L + PKV
Sbjct: 187 LMVSNCLRFNGENSGISRMAKNIQAQFEKHMLNIPPKV 224
>gi|240981154|ref|XP_002403633.1| bromodomain-containing protein, putative [Ixodes scapularis]
gi|215491405|gb|EEC01046.1| bromodomain-containing protein, putative [Ixodes scapularis]
Length = 988
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 55 LNASKKQGSNSKGSSTLKDKEKERHVPSIR------------KQQQEASRREKAAEKRME 102
+ A++K+G SK S KE + PS + K + + RREK + ++
Sbjct: 827 MKANRKKGRPSKESKDQAGKEAKEAPPSKKGEGAAPATASPSKAAKASERREKNKSQVLK 886
Query: 103 EL--IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+L RQ IL + QHK AWPF+ PV+ K Y + I KPMD ST++ +++A +Y
Sbjct: 887 DLAACRQ---ILDELEQHKDAWPFLLPVNTKQF--PSYRKFIKKPMDVSTMRSKLDANQY 941
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
K E D RL+F N +N++ S V + FE +W +L
Sbjct: 942 KGKDEFAVDARLIFDNCETFNEDDSPVGQAGHNMRTFFESRWEEL 986
>gi|165970446|gb|AAI58274.1| LOC100144959 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ + +H ++WPF QPVD L L DYY++I PMD STI+K++E Y + D
Sbjct: 39 VVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQD 98
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN D+ VM++ L F EK
Sbjct: 99 FNTMFTNCYIYNKPGDDIVVMSQELEKVFMEK 130
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF + V L D + I PMD +TI+ +ME YK+ ++ +D+RL+F N+ K
Sbjct: 312 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDIRLMFMNSYK 369
Query: 180 YNDERSDVHVMAKTLLAKFE 199
YN ++V MA+ + FE
Sbjct: 370 YNPPDNEVVNMARKMQDVFE 389
>gi|406602290|emb|CCH46128.1| Bromodomain-containing factor 1 [Wickerhamomyces ciferrii]
Length = 683
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 32/279 (11%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKG 132
+E H P + + R+K K + EL R +L+ +T K+ +PF++PVD
Sbjct: 336 REIHPPKPKDMPYDIRPRKK---KFVPEL-RFSQQVLKELTSKKYESFNYPFLEPVDPVA 391
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
L Y++ + +PMD ST++ ++ Y+N E D+RL+F+N +N E + V++M
Sbjct: 392 LNCPTYFDYVSEPMDLSTVQNKLNNNIYENADEFERDIRLIFQNCYSFNPEGTAVNMMGH 451
Query: 193 TLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVH 252
L A F+++W+ P ++ ++EE E + ++ + A + +L + +
Sbjct: 452 RLEAVFDKRWVD-RPVTPATPQQSDDEEEEESEEEEIDESAITNPAIQFLEQQLETMKLQ 510
Query: 253 LDELREMLVQKCRK-----------------------TSTEEKRK-LGAALTRLSPEDLG 288
L +L++ ++K R+ T T E +K L + LS L
Sbjct: 511 LAKLKKEELEKIRRERSKKKKSSKPKKRRRRTSDASFTVTYEMKKELSEKMGELSERKLN 570
Query: 289 KALEIVAQSNTGFQATAEEVELDMDAQSESTLWRLKFFV 327
+ L I+ ++ + EE+ELDMD +TL +L FV
Sbjct: 571 QVLSIIGEALNINSSNGEEIELDMDQLDNATLVKLYTFV 609
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L+ I + K A PF+ PVD L + YY I +PMD STI++++ A Y ++E D
Sbjct: 195 LKIIKRMKDAGPFLHPVDTVKLQIPLYYNFITRPMDLSTIERKLNANAYAELQEFIDDFN 254
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK 208
L+ N +++N S + M++ + A FE+ L PK
Sbjct: 255 LMVDNCVRFNGAESGIAQMSRNIQASFEKHMLNAPPK 291
>gi|344301621|gb|EGW31926.1| hypothetical protein SPAPADRAFT_61027 [Spathaspora passalidarum
NRRL Y-27907]
Length = 330
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ + +PF+ PVD L + +Y EV+ +PMD TI+ ++ +Y+N E DVRLVFKN
Sbjct: 5 HYNYNFPFLSPVDTVALNIPNYNEVVKEPMDLGTIQTKLANNQYENGDEFEHDVRLVFKN 64
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKW 202
+N E +DV++M L A F++KW
Sbjct: 65 CYLFNPEGTDVNMMGHRLEAVFDKKW 90
>gi|255072301|ref|XP_002499825.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226515087|gb|ACO61083.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 675
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 26/201 (12%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM-EA 157
+++E + RQ L+ + HKWA PF +PVD L L Y E++ +PMD T++ + +
Sbjct: 283 RKLEVVNRQCLAALKQLMAHKWAHPFNKPVDHVALNLPTYPEIVKRPMDLGTVEANIRKG 342
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERS-DVHVMAKTLLAKFEEKWLQLLPKVTE----- 211
Y E+ DV LVF NA + + DVHVMA L + ++W + + E
Sbjct: 343 GVYACAEEVHADVSLVFSNAKTFTPKPEMDVHVMAVALEEFWAQRWAAVADRAKEVEEGM 402
Query: 212 ------EEKRREEEEAEAQL---DMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQ 262
EK+ EE A +L +M+ A A EL + LD+L+
Sbjct: 403 TVEKECAEKKSEEMNARKRLASEEMRCAGLMA----------ELDRLRRQLDDLKRQTRS 452
Query: 263 KCRKTSTEEKRKLGAALTRLS 283
CR +T EK +L LT +
Sbjct: 453 ICRPMTTAEKDQLRRNLTNIP 473
>gi|119569102|gb|EAW48717.1| pleckstrin homology domain interacting protein, isoform CRA_a [Homo
sapiens]
Length = 1546
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
D+EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1010 DEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQP 1069
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1070 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1127
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1128 IYSMSLRLSAFFEE 1141
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 909 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 966
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 967 GSPIVKSAK 975
>gi|242058181|ref|XP_002458236.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
gi|241930211|gb|EES03356.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
Length = 225
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
W F PVD + LGL DYY V+ PMD T+ +++E + Y DVRL F+NAM Y
Sbjct: 76 GWVFDAPVDARALGLRDYYTVVADPMDLGTVLRRLERRRYVYPTAFADDVRLTFRNAMSY 135
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQL 205
NDE V+ A L FE +W +
Sbjct: 136 NDEGDPVYESAAELSGIFEARWASI 160
>gi|50285717|ref|XP_445287.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524591|emb|CAG58193.1| unnamed protein product [Candida glabrata]
Length = 643
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 47/311 (15%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
K K ++ ++ ++R + K+A +PF++PVD L Y++ + +PMD T+
Sbjct: 277 KPKSKSLQRAMKFCQGVVRELMSKKYASFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTV 336
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL--QLLPKV 209
K++ EY+N+ + D+RL+F+N +N + + V++M L F KW L V
Sbjct: 337 SKKLSNWEYENLDQAEHDIRLIFQNCYAFNPDGTIVNMMGHRLEDIFNTKWADRPLYSDV 396
Query: 210 -TEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREMLVQKCRK-- 266
+EE + ++E + D+++ + + + ++L + V L +L++ ++K RK
Sbjct: 397 ESEEAESAYDDEESDESDVEIDETSITNPAIQYLEDQLERMKVELQQLKKQELEKIRKER 456
Query: 267 ----------------------TSTEEKRKLGAALTR------------LSPEDLGKALE 292
+ K+KL + +T L L K +E
Sbjct: 457 RLARGPKKTRGRRGRKKGSTKAKTGRGKKKLKSVVTYDMKKIITENINDLPTAKLEKVIE 516
Query: 293 IVAQSNTGFQATAEEVELDMDAQSESTLWRL--KFFVKDALKSQGNNNNNDNNKNNNNSA 350
I+ +S EEVELD+D +T+ L FF + ++ N++ NDN + +
Sbjct: 517 IIKKSMPNI-GDDEEVELDLDTLDNNTILTLYNTFFRQ--FEAPANDSGNDNQSVSPTNG 573
Query: 351 TNNNKRKREIC 361
KR + +
Sbjct: 574 LGRRKRSKNLS 584
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + + K A PF+QPVD L + Y+ I +PMD TI++++ A Y+ +I D
Sbjct: 120 IKAVKRLKDARPFLQPVDPVALNIPLYFNFIKRPMDLQTIERKLNANAYETPEQITEDFN 179
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L+ +N+ K+N + + M + + A FE+ L +
Sbjct: 180 LMVENSAKFNGPTAVITQMGRNIQAAFEKHMLNM 213
>gi|326916293|ref|XP_003204443.1| PREDICTED: PH-interacting protein-like [Meleagris gallopavo]
Length = 1699
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVPSI----RKQQQEASR-REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ +VP RK Q R R +A ++ +Q +L I Q + + PF QP
Sbjct: 1154 EEEKDTNVPGTSTRKRKDHQPKRRLRNRAQSYDIQSWKKQCQELLNLIFQCEDSEPFRQP 1213
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1214 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1271
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1272 IYSMSLRLSAFFEE 1285
>gi|50553560|ref|XP_504191.1| YALI0E20537p [Yarrowia lipolytica]
gi|49650060|emb|CAG79786.1| YALI0E20537p [Yarrowia lipolytica CLIB122]
Length = 653
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Query: 105 IRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
+R +L+ +T K +++PF+ PVD L Y+++I +PMD ST++++M Y+
Sbjct: 311 LRFCNQVLKELTSKKHEEYSFPFLLPVDPVALNCPSYFKIIKEPMDLSTVQEKMNNNAYE 370
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
E +DVRL+FKN ++N + + V+ M K L A F++KW
Sbjct: 371 TADEFESDVRLIFKNCYRFNPDGTPVNKMGKRLEAIFDKKW 411
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%)
Query: 105 IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVR 164
++ + L+ + + K A PF+ PVD L + Y+EVI PMD T++K++ EY
Sbjct: 126 VKYAASSLKAVKRLKDAAPFIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGEYGTKE 185
Query: 165 EICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
++ DV+ + N + +N S + MAK+L FE
Sbjct: 186 DMIADVQRIVDNCLTFNGADSFISSMAKSLFTSFE 220
>gi|134074582|emb|CAK38875.1| unnamed protein product [Aspergillus niger]
Length = 793
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L + +A PF PVD L + Y+ +I KPMDFST++ ++ A +Y+N +E D+R
Sbjct: 448 LHKPKHYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQYENAKEFELDMR 507
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
L+ KN K+N ++ + L +F +KW Q
Sbjct: 508 LILKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 540
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+ +PVD L + Y + I +PMD TI+K+++ Y+ + + D L+ +NA+ +N
Sbjct: 305 YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKLKNNVYRTAQAVIDDFNLMVQNALTFN 362
>gi|332218105|ref|XP_003258199.1| PREDICTED: PH-interacting protein, partial [Nomascus leucogenys]
Length = 1803
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ EEL L I Q + + PF Q
Sbjct: 1276 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCEEL-------LNLIFQCEDSEPFRQ 1325
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1326 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1383
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1384 RIYSMSLRLSAFFEE 1398
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1166 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1223
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1224 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1274
>gi|449498095|ref|XP_002189784.2| PREDICTED: PH-interacting protein [Taeniopygia guttata]
Length = 1907
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Query: 73 DKEKERHVPSI----RKQQQEASR-REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ +VP RK Q R R +A ++ +Q +L I Q + + PF QP
Sbjct: 1373 EEEKDTNVPGTSTRKRKDHQPKRRLRNRAQSYDIQSWKKQCQELLNLIFQCEDSEPFRQP 1432
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1433 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1490
Query: 187 VHVMAKTLLAKFEEKWLQLL 206
++ M+ L A FEE +L
Sbjct: 1491 IYSMSLRLSAFFEEHISSIL 1510
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E++ Y+ + + +VR + N +N+
Sbjct: 1271 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLESRFYRRLSSLMWEVRYIEHNTRTFNEP 1328
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1329 GSPIVKSAK 1337
>gi|345327536|ref|XP_001510591.2| PREDICTED: PH-interacting protein-like [Ornithorhynchus anatinus]
Length = 1896
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 19 PESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKER 78
P S + + F V D+ K + N I + NA KK K S +++EK+
Sbjct: 1289 PGSPIVKSAKF---VTDLLLHFVKDQTCYNIIPVY--NAMKK-----KVLSDSEEEEKDA 1338
Query: 79 HVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
+P S RK++ RR +A ++ RQ +L I Q + + PF QPVD+ L
Sbjct: 1339 DIPGTSTRKRKDHQPRRRLRNRAQSYDVQAWKRQCQELLNLIFQCEDSEPFRQPVDL--L 1396
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAK 192
DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS ++ M+
Sbjct: 1397 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL 1456
Query: 193 TLLAKFEE 200
L A FEE
Sbjct: 1457 RLSAFFEE 1464
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E++ Y+ V + +VR + N +N+
Sbjct: 1232 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLESRFYRRVSSLMWEVRYIEHNTRTFNEP 1289
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1290 GSPIVKSAKFVTDLLLHFVKDQTCYNIIPVYNAMKKKVLSDSEEEEKDADI 1340
>gi|291396514|ref|XP_002714488.1| PREDICTED: pleckstrin homology domain interacting protein
[Oryctolagus cuniculus]
Length = 1837
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K KE H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1312 GTSTRKRKE---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1361
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1362 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1419
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1420 RIYSMSLRLSAFFEE 1434
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1202 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1259
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1260 GSPIVKSAKFVTDLLLHFIKDQTCYNMIPLYNSMKKKVLSDSEEEEKDADV 1310
>gi|397579592|gb|EJK51267.1| hypothetical protein THAOC_29580 [Thalassiosira oceanica]
Length = 2323
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
A PF PVD K LGL DY +I PMD T+K+++ +Y V ++ DVR ++KN KY
Sbjct: 31 AAPFRDPVDWKSLGLYDYPRIIRNPMDLGTVKRRLNEGKYSTVYDVAEDVRRIWKNCCKY 90
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQL 205
N E SD + + +++ KFEEK+ +L
Sbjct: 91 NPEDSDFNKLGRSMHEKFEEKYERL 115
>gi|149017671|gb|EDL76672.1| bromodomain and WD repeat domain containing 1 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 1139
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
S R++ RR + + + RQ +L I Q + + PF QPVD+ + DY ++
Sbjct: 176 SGRRRVHNWKRRSRGSSCIESDWRRQCKALLILIFQCEDSEPFRQPVDL--VEYPDYRDI 233
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEE 200
ID PMDF T+++ +EA Y + E C D+RL+F NA Y ++RS ++ M L A FEE
Sbjct: 234 IDTPMDFGTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEE 293
Query: 201 K 201
K
Sbjct: 294 K 294
>gi|363732003|ref|XP_003641045.1| PREDICTED: PH-interacting protein, partial [Gallus gallus]
Length = 1781
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Query: 73 DKEKERHVPSI----RKQQQEASR-REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ +VP RK Q R R +A ++ +Q +L I Q + + PF QP
Sbjct: 1248 EEEKDTNVPGTSTRKRKDHQPKRRLRNRAQSYDIQSWKKQCQELLNLIFQCEDSEPFRQP 1307
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1308 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1365
Query: 187 VHVMAKTLLAKFEEKWLQLL 206
++ M+ L A FEE +L
Sbjct: 1366 IYSMSLRLSAFFEEHISSIL 1385
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E++ Y+ + + +VR + N +N+
Sbjct: 1146 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLESRFYRRLSSLMWEVRYIEHNTRTFNEP 1203
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1204 GSPIVKSAK 1212
>gi|149017670|gb|EDL76671.1| bromodomain and WD repeat domain containing 1 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 1182
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ +L I Q + + PF QPVD+ + DY ++ID PMDF T+++ +EA Y + E
Sbjct: 200 RQCKALLILIFQCEDSEPFRQPVDL--VEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVE 257
Query: 166 ICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEEK 201
C D+RL+F NA Y ++RS ++ M L A FEEK
Sbjct: 258 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEK 294
>gi|348511394|ref|XP_003443229.1| PREDICTED: hypothetical protein LOC100690815 [Oreochromis niloticus]
Length = 3314
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
ILR++ HK AWPF++PVD DYY VI +PMDFST++ +++ + Y + E DV
Sbjct: 3206 ILRSLQSHKMAWPFLEPVDPHDA--PDYYRVIKEPMDFSTMETRLQKRHYHKLTEFVADV 3263
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN + + A+TL A F +K
Sbjct: 3264 TKIFDNCRYYNPNDTPFYQCAETLEAFFVQK 3294
>gi|297678536|ref|XP_002817124.1| PREDICTED: PH-interacting protein [Pongo abelii]
Length = 1821
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ EEL L I Q + + PF Q
Sbjct: 1294 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCEEL-------LNLIFQCEDSEPFRQ 1343
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1344 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1401
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1402 RIYSMSLRLSAFFEE 1416
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1242 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1292
>gi|296198629|ref|XP_002746795.1| PREDICTED: PH-interacting protein [Callithrix jacchus]
Length = 1821
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ EEL L I Q + + PF Q
Sbjct: 1294 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCEEL-------LNLIFQCEDSEPFRQ 1343
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1344 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1401
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1402 RIYSMSLRLSAFFEE 1416
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR--REEEEAEAQLDM 227
S + AK LL F ++ ++P +K+ + EE E DM
Sbjct: 1242 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDTDM 1292
>gi|380814166|gb|AFE78957.1| PH-interacting protein [Macaca mulatta]
gi|380814168|gb|AFE78958.1| PH-interacting protein [Macaca mulatta]
Length = 1821
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ EEL L I Q + + PF Q
Sbjct: 1294 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCEEL-------LNLIFQCEDSEPFRQ 1343
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1344 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1401
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1402 RIYSMSLRLSAFFEE 1416
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1242 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1292
>gi|297291203|ref|XP_002803853.1| PREDICTED: PH-interacting protein-like [Macaca mulatta]
Length = 1838
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ EEL L I Q + + PF Q
Sbjct: 1311 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCEEL-------LNLIFQCEDSEPFRQ 1360
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1361 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1418
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1419 RIYSMSLRLSAFFEE 1433
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1201 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1258
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1259 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1309
>gi|402867475|ref|XP_003897875.1| PREDICTED: PH-interacting protein [Papio anubis]
Length = 1821
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ EEL L I Q + + PF Q
Sbjct: 1294 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCEEL-------LNLIFQCEDSEPFRQ 1343
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1344 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1401
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1402 RIYSMSLRLSAFFEE 1416
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1242 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1292
>gi|449283574|gb|EMC90179.1| PH-interacting protein, partial [Columba livia]
Length = 1757
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Query: 73 DKEKERHVPSI----RKQQQEASR-REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ +VP RK Q R R +A ++ +Q +L I Q + + PF QP
Sbjct: 1225 EEEKDTNVPGTSTRKRKDHQPKRRLRNRAQSYDIQSWKKQCQELLNLIFQCEDSEPFRQP 1284
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1285 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1342
Query: 187 VHVMAKTLLAKFEEKWLQLL 206
++ M+ L A FEE +L
Sbjct: 1343 IYSMSLRLSAFFEEHISSIL 1362
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E++ Y+ + + +VR + N +N+
Sbjct: 1123 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLESRFYRRLSSLMWEVRYIEHNTRTFNEP 1180
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1181 GSPIVKSAK 1189
>gi|431838195|gb|ELK00127.1| PH-interacting protein, partial [Pteropus alecto]
Length = 1756
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 73 DKEKERHVPSI----RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPV 128
++EK+ VP RK Q R A+ ++ +Q +L I Q + + PF QPV
Sbjct: 1222 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSDIQAWKKQCQELLNLIFQCEDSEPFRQPV 1281
Query: 129 DVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDV 187
D+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS +
Sbjct: 1282 DL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRI 1339
Query: 188 HVMAKTLLAKFEE 200
+ M+ L A FEE
Sbjct: 1340 YSMSLRLSAFFEE 1352
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1121 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1178
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1179 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1229
>gi|157823119|ref|NP_001101730.1| bromodomain adjacent to zinc finger domain protein 2B [Rattus
norvegicus]
gi|149047773|gb|EDM00389.1| bromodomain adjacent to zinc finger domain, 2B (predicted) [Rattus
norvegicus]
Length = 2191
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E + S+ + E++ K +K + + IL + H+ AWPF+
Sbjct: 2051 RGSKDLKKRKMEENT-SLHLSKAESATSVKKPKKEECKDLALCSMILTEMETHEDAWPFL 2109
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ +Y N DVRLVF N +N++ S
Sbjct: 2110 LPVNLKLV--PGYRKVIKKPMDFSTIREKLNNGQYPNFETFALDVRLVFDNCETFNEDDS 2167
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2168 DIGRAGHSMRKYFEKKW 2184
>gi|340707459|pdb|2YDW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707460|pdb|2YDW|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707461|pdb|2YDW|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707481|pdb|2YEK|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707482|pdb|2YEK|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707483|pdb|2YEK|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|393715359|pdb|4AKN|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715360|pdb|4AKN|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715361|pdb|4AKN|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
Length = 153
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 39 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 98
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 99 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 139
>gi|371927839|pdb|4A9E|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927840|pdb|4A9E|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927841|pdb|4A9E|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927842|pdb|4A9F|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927843|pdb|4A9F|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927844|pdb|4A9F|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927869|pdb|4A9H|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927870|pdb|4A9H|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927871|pdb|4A9H|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927872|pdb|4A9I|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927873|pdb|4A9I|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927874|pdb|4A9I|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927875|pdb|4A9J|A Chain A, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927876|pdb|4A9J|B Chain B, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927877|pdb|4A9J|C Chain C, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|374977910|pdb|4A9M|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977911|pdb|4A9M|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977912|pdb|4A9M|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977913|pdb|4A9N|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977914|pdb|4A9N|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977915|pdb|4A9N|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977916|pdb|4A9O|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977917|pdb|4A9O|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977918|pdb|4A9O|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|383875671|pdb|4ALH|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875672|pdb|4ALH|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875673|pdb|4ALH|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|393715366|pdb|4ALG|A Chain A, N-Terminal Bromodomain Of Human Brd2 With Ibet-151
Length = 154
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD LGL DY+++I +PMD TIK+++E Y E D
Sbjct: 39 VVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQD 98
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
+F N YN D+ +MA+TL E+ +LQ + + +EE+
Sbjct: 99 FNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 139
>gi|403261999|ref|XP_003923385.1| PREDICTED: PH-interacting protein [Saimiri boliviensis boliviensis]
Length = 1785
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ EEL L I Q + + PF Q
Sbjct: 1258 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCEEL-------LNLIFQCEDSEPFRQ 1307
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1308 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFTNSKAYTPSKRS 1365
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1366 RIYSMSLRLSAFFEE 1380
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1148 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1205
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR--REEEEAEAQLDM 227
S + AK LL F ++ ++P +K+ + EE E DM
Sbjct: 1206 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDTDM 1256
>gi|189031512|gb|ACD74899.1| BDF2 [Pneumocystis carinii]
Length = 317
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 81 PSIRKQQQEASRREKAAEKRM-EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYY 139
PS R ++A EKA + M +E + +ILR + +++ A PF QPVD L + Y
Sbjct: 151 PSKRIHPEDA-FYEKAEQAEMTKEQYKYAISILRQLRRNRDARPFNQPVDPIKLNIPSYP 209
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+I PMDF TI K++ +K+Y+ V DV LVF N +N E S + +MA+ L F
Sbjct: 210 TIITHPMDFGTIDKKLSSKQYETVDXFKKDVELVFTNCFTFNGEESPISIMARNLKNIFG 269
Query: 200 EKWLQL 205
++ LQ+
Sbjct: 270 KQILQM 275
>gi|344245482|gb|EGW01586.1| Bromodomain adjacent to zinc finger domain protein 2B [Cricetulus
griseus]
Length = 1853
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ +Y N D
Sbjct: 1756 VILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQYTNFETFALD 1813
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
VRLVF N +N++ SD+ ++ FE+KW
Sbjct: 1814 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 1846
>gi|281207562|gb|EFA81745.1| PHD zinc finger-containing protein [Polysphondylium pallidum PN500]
Length = 730
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 79/132 (59%), Gaps = 14/132 (10%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+E+L G ++++ ++ KW F +PVD +G+ DY +VI +P DF TI+K + A ++
Sbjct: 425 LEKLKEIIGILMKD-SRSKW---FREPVDPIKMGIPDYNDVIKQPRDFGTIEKSLAAGKF 480
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
+ + D++LVFKNAM YN+E SDV+ +A+ L +++ + K + E E
Sbjct: 481 THFSMVHNDIKLVFKNAMTYNEEESDVYELAEELEKVYDDLF----------RKAQLESE 530
Query: 221 AEAQLDMQLAQD 232
AEAQL ++ +D
Sbjct: 531 AEAQLQAEIIKD 542
>gi|5262644|emb|CAB45759.1| hypothetical protein [Homo sapiens]
Length = 449
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Query: 56 NASKKQGSNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNI 115
+++ S +G+ LK ++ E + SI +QE+ K ++ + + IL +
Sbjct: 299 DSASTSSSLKRGNKDLKKRKMEENT-SINLSKQESFTSVKKPKRDDSKDLALCSMILTEM 357
Query: 116 TQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFK 175
H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y N+ DVRLVF
Sbjct: 358 ETHEDAWPFLLPVNLKLVP--GYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFD 415
Query: 176 NAMKYNDERSDVHVMAKTLLAKFEEKW 202
N +N++ SD+ + FE+KW
Sbjct: 416 NCETFNEDDSDIGRAGHNMRKYFEKKW 442
>gi|195123201|ref|XP_002006096.1| GI20845 [Drosophila mojavensis]
gi|193911164|gb|EDW10031.1| GI20845 [Drosophila mojavensis]
Length = 468
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + H ++ PFM+PVD + L + YY VI+ PMD TI K++E Y NV E+ D+
Sbjct: 43 LLEELPHHDFSLPFMEPVDTEALKVPSYYTVIEHPMDMGTIIKRVENNYYHNVNELVYDI 102
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLA 230
RLV N K+N S V+ + L F++ + LPK EE +E+AE L M
Sbjct: 103 RLVISNCFKFNMPGSLVYRNGQELEELFKQVY-DSLPK--GEEVPCSKEQAEKSLTMH-- 157
Query: 231 QDAAHAKMARDTSNELYEVDVH 252
Q + R+ +++L E D H
Sbjct: 158 QCRCRLRRVREETDDL-EQDAH 178
>gi|300701921|ref|XP_002995060.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
gi|239603745|gb|EEQ81389.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
Length = 368
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+E ++ G IL+ + +++ A+PF++PVD G+ DY I PMD ST+KK++++K Y
Sbjct: 9 LEHQMKYCGQILQKLKRNQNAFPFLEPVDPIKYGIPDYPLKIKYPMDLSTVKKKLDSKVY 68
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
+D++L+F N YN SDV+++ K L ++E LLP ++++R E
Sbjct: 69 NTPEMFDSDIKLMFNNCYTYNHPSSDVYLLGKKLEEYYDE-LFALLPMEISKKRKRPEMS 127
Query: 221 AE 222
E
Sbjct: 128 LE 129
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 12/104 (11%)
Query: 111 ILRNITQHKW---AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREIC 167
+L I + K+ WPF++PVD + L L YYE+I PMD +IK +++ K YK V E
Sbjct: 155 VLNEILKSKYKGFVWPFLEPVD-ENL-LPQYYEIIKNPMDLKSIKDKLDLKSYKGVDEFS 212
Query: 168 TDVRLVFKNAMKYNDERSDVHV-------MAKTLLAKFEEKWLQ 204
D+RL+ +N K+ND+ SDV+ + +LLA +E K L+
Sbjct: 213 NDLRLITENCHKFNDQGSDVYRCGTELNELVNSLLANYEPKDLK 256
>gi|354476573|ref|XP_003500499.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Cricetulus griseus]
Length = 2117
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 66 KGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFM 125
+GS LK ++ E ++ SI + E++ K +K + + IL + H+ AWPF+
Sbjct: 1977 RGSKDLKKRKMEENL-SINLSKIESATSVKKPKKDDSKDLALCSVILTEMETHEDAWPFL 2035
Query: 126 QPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERS 185
PV++K + Y +VI KPMDFSTI++++ +Y N DVRLVF N +N++ S
Sbjct: 2036 LPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQYTNFETFALDVRLVFDNCETFNEDDS 2093
Query: 186 DVHVMAKTLLAKFEEKW 202
D+ ++ FE+KW
Sbjct: 2094 DIGRAGHSMRKYFEKKW 2110
>gi|159795469|pdb|2RFJ|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795470|pdb|2RFJ|B Chain B, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795471|pdb|2RFJ|C Chain C, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|394986421|pdb|4FLP|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
gi|394986422|pdb|4FLP|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
Length = 119
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+++ +H ++WPF +PVD L L DYY +I PMD +TIKK++E K Y E D
Sbjct: 20 VVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIED 79
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ ++Q L ++ +EE
Sbjct: 80 FNTMFSNCYLYNKPGDDIVLMAQAL----EKLFMQKLSQMPQEE 119
>gi|412985439|emb|CCO18885.1| unnamed protein product [Bathycoccus prasinos]
Length = 1101
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 98 EKRMEELIRQFGTILRNITQ-HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQME 156
E R+ + ++ IL+ + K+++PF++ VD L + DY++VI PMDF TI K++E
Sbjct: 526 ETRVNAPLYKYKIILQKLMNDRKYSFPFLEKVDPVALNIPDYFDVISDPMDFGTIFKRLE 585
Query: 157 AKEYKNV------------REI-CTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
++ K V EI DVRLVF NA +YN + V+V A+ L FE +W
Sbjct: 586 PEDEKGVPIEPTYYTNESDPEIFANDVRLVFANAFRYNQPGTFVYVCAEKLAQIFEREWS 645
Query: 204 QLLP 207
Q P
Sbjct: 646 QKFP 649
>gi|428178605|gb|EKX47480.1| hypothetical protein GUITHDRAFT_50108, partial [Guillardia theta
CCMP2712]
Length = 90
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV-REICTD 169
+L ++ K AWPF +PVD K L L DY++++ +PMD STI+ +++ +EYK V E D
Sbjct: 2 VLDKVSNDKHAWPFEEPVDAKKLKLKDYHKIVKEPMDLSTIRSRLQGEEYKRVEEEFHRD 61
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKF 198
+ LVF NA+ +N E +H A+ L KF
Sbjct: 62 MHLVFDNALLFNHEGDPIHEYAEQLKMKF 90
>gi|148694505|gb|EDL26452.1| mCG15223, isoform CRA_c [Mus musculus]
Length = 1266
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 730 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 789
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 790 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 847
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 848 IYSMSLRLSAFFEE 861
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 600 EWGANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 656
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK---TLLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 657 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 716
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 717 YNSMKKKVLSDSEEEEKDADV 737
>gi|422294825|gb|EKU22125.1| bromodomain containing protein [Nannochloropsis gaditana CCMP526]
Length = 227
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F++PVD K LGL DY VI PMD TIK ++E+ Y ++ DVRLV+ N YN E
Sbjct: 25 FLEPVDWKTLGLTDYPLVISTPMDLGTIKGRLESGHYTKHAQVAEDVRLVWNNCKTYNQE 84
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTS 243
S ++ +A L KFEEK+ ++ TEE E+E L+ + M R TS
Sbjct: 85 GSYLYKIADKLAGKFEEKYSKI---KTEEPDGPEDENQPPSLE---DKRQFRENMYRITS 138
Query: 244 NELYEV 249
++L E+
Sbjct: 139 DQLGEI 144
>gi|160333520|ref|NP_001103994.1| bromodomain containing 2b [Danio rerio]
gi|157280795|gb|ABV29330.1| truncated bromodomain-containing protein 2b [Danio rerio]
Length = 276
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H +AWPF +PVD L L DY+++I +PMD TIKK++E Y+ E D
Sbjct: 81 VLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNYYRGASECLQD 140
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA++L F +K Q+
Sbjct: 141 FNTMFTNCYIYNKPADDIVLMAQSLEKVFLQKVAQM 176
>gi|149017672|gb|EDL76673.1| bromodomain and WD repeat domain containing 1 (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 886
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ +L I Q + + PF QPVD+ + DY ++ID PMDF T+++ +EA Y + E
Sbjct: 186 RQCKALLILIFQCEDSEPFRQPVDL--VEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVE 243
Query: 166 ICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEEK 201
C D+RL+F NA Y ++RS ++ M L A FEEK
Sbjct: 244 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEK 280
>gi|358338689|dbj|GAA31548.2| E1A/CREB-binding protein [Clonorchis sinensis]
Length = 2085
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 80 VPSIRKQQQEASRREKAAE---KR--MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLG 134
VP++ S KA E KR EEL+R F +L + K+A PF PVD L
Sbjct: 659 VPTLTSSASGLSLNVKADETNWKRWSREELLRSFLQLLEEVYNDKFAEPFRAPVDPVMLH 718
Query: 135 LDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTL 194
+ DY+EVI +PMD +TI+ +E YK+ E+ RL+F NA YN + S V+ M L
Sbjct: 719 IPDYFEVIKEPMDLTTIRNNLEDGNYKDPWEVVEHFRLMFNNAWLYNKKNSKVYKMCTKL 778
Query: 195 LAKFEEKWLQLL 206
F+ + Q++
Sbjct: 779 AELFQSRIDQVM 790
>gi|149019032|gb|EDL77673.1| similar to WD repeat domain 11 protein (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 1267
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 730 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWRKQCQELLNLIFQCEDSEPFRQP 789
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 790 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 847
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 848 IYSMSLRLSAFFEE 861
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 600 EWGANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 656
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK---TLLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 657 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 716
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 717 YNSMKKKVLSDSEEEEKDADV 737
>gi|444729685|gb|ELW70092.1| PH-interacting protein [Tupaia chinensis]
Length = 1175
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 648 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 697
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 698 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 755
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 756 RIYSMSLRLSAFFEE 770
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 538 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 595
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 596 GSPIVKSAK 604
>gi|194885054|ref|XP_001976378.1| GG20046 [Drosophila erecta]
gi|190659565|gb|EDV56778.1| GG20046 [Drosophila erecta]
Length = 257
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 86 QQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKP 145
+Q+ S E A K M + R F T +NI AW F +P+D + LGL DY+E++ +P
Sbjct: 4 KQETISSPEINACKVM--IKRMFSTTYKNI-----AWVFYEPLDAQLLGLHDYHEIVREP 56
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
MD ST++ ++ Y + DVRL+F N Y + + MAK L FEE + Q+
Sbjct: 57 MDLSTVRHRLNTGCYLTAADFAKDVRLIFYNTYLYTNPGHLCYHMAKQLQIIFEEMYAQV 116
Query: 206 LPKVTEEEKRR 216
KRR
Sbjct: 117 QLYTCSRTKRR 127
>gi|348585120|ref|XP_003478320.1| PREDICTED: PH-interacting protein-like [Cavia porcellus]
Length = 1798
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1259 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1318
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1319 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1376
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1377 IYSMSLRLSAFFEE 1390
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + ++R + N +N+
Sbjct: 1158 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEIRYIEHNTRTFNEP 1215
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1216 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1266
>gi|148694507|gb|EDL26454.1| mCG15223, isoform CRA_e [Mus musculus]
Length = 1498
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 962 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1021
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1022 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1079
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1080 IYSMSLRLSAFFEE 1093
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 832 EWGANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 888
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 889 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 948
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 949 YNSMKKKVLSDSEEEEKDADV 969
>gi|325193402|emb|CCA27731.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 2004
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%)
Query: 101 MEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEY 160
+ EL + +L + + + W F PVD + DY+++I PMD IKK++E + Y
Sbjct: 722 LTELKNRLMPLLTKLMESEHGWAFNSPVDPVQWNIPDYFDIIKCPMDLGAIKKRLENEHY 781
Query: 161 KNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEE 220
+V DVRLVF+N + YN + ++ AK LL +FE+ + ++ + RR E+
Sbjct: 782 NSVDAFAADVRLVFENCIAYNSSTNKFNIAAKQLLTQFEKNLTSIKSQLERQLCRRCEQR 841
Query: 221 AE 222
E
Sbjct: 842 RE 843
>gi|340501220|gb|EGR28026.1| hypothetical protein IMG5_184560 [Ichthyophthirius multifiliis]
Length = 288
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 68 SSTLKDKEKERHVPSIRKQQQEASRREK----------AAEKRMEELIRQFGTILRNITQ 117
+S + K+R + K Q + SRRE+ + M ++Q IL+ + +
Sbjct: 3 TSLNRSSNKKRQIKQTLKTQSQKSRREQLNSISVSTNSINNQGMSADMKQCMVILQRLKK 62
Query: 118 HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNA 177
++ A PF+ VD +YY++I +PMD S I+ ++ +Y+ + DV+ +++N+
Sbjct: 63 NENAIPFLYRVDTIQQNCPNYYQIITEPMDLSQIELNLKLNQYQTKSQFAADVKKIWRNS 122
Query: 178 MKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAK 237
YN + S ++ M + A FE+ L ++ RR Q + + +
Sbjct: 123 FIYNPKGSQIYYMTVKMSAFFEK----LFSQIENISPRRIN-----QYQNNYNKISQNIN 173
Query: 238 MARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQS 297
+ N L + + +D++ L + EK++LG + L+PEDL IV
Sbjct: 174 LLTKQVNGLAKTETKIDKMNIPL-------TMNEKKQLGTNIRNLAPEDLNGIWSIVQDD 226
Query: 298 NTGFQATAEEVELDMDAQSESTLWRLKFFVKDAL 331
N Q +E +E D+D +L+ +VK L
Sbjct: 227 N---QHNSEVIEFDIDTLPIKKARKLEQYVKQKL 257
>gi|149019031|gb|EDL77672.1| similar to WD repeat domain 11 protein (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149019033|gb|EDL77674.1| similar to WD repeat domain 11 protein (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 1417
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 880 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWRKQCQELLNLIFQCEDSEPFRQP 939
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 940 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 997
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 998 IYSMSLRLSAFFEE 1011
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 750 EWGANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 806
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK---TLLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 807 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 866
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 867 YNSMKKKVLSDSEEEEKDADV 887
>gi|392332283|ref|XP_003752531.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Rattus
norvegicus]
Length = 2395
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
S R++ RR + + + RQ +L I Q + + PF QPVD+ + DY ++
Sbjct: 1389 SGRRRVHNWKRRSRGSSCIESDWRRQCKALLILIFQCEDSEPFRQPVDL--VEYPDYRDI 1446
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEE 200
ID PMDF T+++ +EA Y + E C D+RL+F NA Y ++RS ++ M L A FEE
Sbjct: 1447 IDTPMDFGTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEE 1506
Query: 201 K 201
K
Sbjct: 1507 K 1507
>gi|357461403|ref|XP_003600983.1| Global transcription factor group [Medicago truncatula]
gi|355490031|gb|AES71234.1| Global transcription factor group [Medicago truncatula]
Length = 59
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 48/59 (81%), Gaps = 3/59 (5%)
Query: 146 MDFSTIKKQMEAKE---YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
M+F TIK++MEAK+ YKN+REI DVRL+FKNAMKYN+E + VHVMAKT L KFE K
Sbjct: 1 MEFITIKRKMEAKDGYVYKNIREIYVDVRLIFKNAMKYNNEINYVHVMAKTSLQKFENK 59
>gi|354489210|ref|XP_003506757.1| PREDICTED: PH-interacting protein [Cricetulus griseus]
Length = 1795
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1259 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1318
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1319 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1376
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1377 IYSMSLRLSAFFEE 1390
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1129 EWGANPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1185
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ V + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1186 RLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1245
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1246 YNSMKKKVLSDSEEEEKDADV 1266
>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
SI + S KA + R IL + H W F + VD G+ DY++V
Sbjct: 59 SISSSENRPSSNNKAGSMNASK-TRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDV 117
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
I PMD T+KK++ K Y + + DVRL F NAM YN VH +A+ L F +
Sbjct: 118 IRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLE 177
Query: 202 W 202
W
Sbjct: 178 W 178
>gi|400598119|gb|EJP65839.1| histone acetyltransferase [Beauveria bassiana ARSEF 2860]
Length = 467
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 80 VPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYY 139
+P+IR E A + R Q +L ++ H AWPF+ PV+ + DYY
Sbjct: 334 IPAIRASGWSPDMDELARQPRHGPNYNQLLHLLNDLQNHNSAWPFLVPVNRDDVA--DYY 391
Query: 140 EVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFE 199
+VI +PMDFST++ ++EA +Y E D LVF N KYN+E S + + T L KF
Sbjct: 392 DVIKEPMDFSTMESKLEADQYPTPEEFIKDATLVFGNCRKYNNE-STPYAKSATKLEKFM 450
Query: 200 EKWLQLLPKVTEEEKRR 216
+ L+ +P+ + E +
Sbjct: 451 WQQLKAVPEWSHLEPEK 467
>gi|344242097|gb|EGV98200.1| PH-interacting protein [Cricetulus griseus]
Length = 1039
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 578 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 627
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 628 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 685
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 686 RIYSMSLRLSAFFEE 700
>gi|12007336|gb|AAG45146.1| IRS-1 PH domain binding protein PHIP [Mus musculus]
Length = 862
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 326 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 385
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 386 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 443
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 444 IYSMSLRLSAFFEE 457
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+++
Sbjct: 198 GANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQRL 254
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPKVT 210
E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 255 ENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYN 314
Query: 211 EEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 315 SMKKKVLSDSEEEEKDADV 333
>gi|392885383|ref|NP_491384.3| Protein BET-1, isoform a [Caenorhabditis elegans]
gi|351060603|emb|CCD68309.1| Protein BET-1, isoform a [Caenorhabditis elegans]
Length = 853
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD + LGL DY+++I +PMD ++K +ME+ YK + DVRL+ +N
Sbjct: 281 FAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFL 340
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL-------------------LPKVTEEEKRREEEE 220
YN VH F+ +W +L PKV + +E +E
Sbjct: 341 YNPVGDPVHSFGLRFQEVFDRRWAELGDSSSRASSVAPQSAPIAPTPKVAKSSAPKEPKE 400
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELRE 258
+ + + +A+ AK S +L +++ L +RE
Sbjct: 401 SRKEHKKETTFEASGAK-----SEDLMQINNALSMIRE 433
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ +HK WPF +PVD L + Y+E + +PMD TI+ ++++ Y +E D
Sbjct: 50 TVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDD 109
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL 194
+ VF+N +N + DV +MA+ +
Sbjct: 110 IETVFQNCYTFNGKEDDVTIMAQNV 134
>gi|358413726|ref|XP_601481.4| PREDICTED: PH-interacting protein isoform 1 [Bos taurus]
Length = 1649
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1122 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1171
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1172 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1229
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1230 RIYSMSLRLSAFFEE 1244
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1011 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1068
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1069 GSPIVKSAK 1077
>gi|345778537|ref|XP_532211.3| PREDICTED: PH-interacting protein isoform 1 [Canis lupus familiaris]
Length = 1852
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1325 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1374
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1375 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1432
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1433 RIYSMSLRLSAFFEE 1447
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1215 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1272
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR--REEEEAEAQLDM 227
S + AK LL F ++ L+P +K+ + EE E +D+
Sbjct: 1273 GSPIVKSAKFVTDLLLHFIKDQTCYNLIPLYNSMKKKVLSDSEEEEKDVDV 1323
>gi|432098345|gb|ELK28145.1| Bromodomain adjacent to zinc finger domain protein 2B [Myotis
davidii]
Length = 2206
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ AWPF+ PV++K + Y +VI KPMDFSTI++++ + +Y + DV
Sbjct: 2110 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQYSSPEYFALDV 2167
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2168 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|224007327|ref|XP_002292623.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
gi|220971485|gb|EED89819.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
Length = 865
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%)
Query: 104 LIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNV 163
+ R+ ++R + H+ W F PVD LG+ DY++++ PMD + ++ ++E YK++
Sbjct: 50 ITRKCLPLVRKLYNHEHGWVFKDPVDPVELGIPDYFDIVQHPMDLALVETKLENGVYKDL 109
Query: 164 REICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
D +LVF+NA+ +N E++DV MAK LL F+E
Sbjct: 110 DSFERDTKLVFENAILFNGEKNDVGGMAKQLLFMFDE 146
>gi|350632424|gb|EHA20792.1| hypothetical protein ASPNIDRAFT_139507 [Aspergillus niger ATCC
1015]
Length = 531
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L + +A PF PVD L + Y+ +I KPMDFST++ ++ A +Y+N +E D+R
Sbjct: 274 LHKPKHYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQYENAKEFELDMR 333
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
L+ KN K+N ++ + L +F +KW Q
Sbjct: 334 LILKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 366
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
+ +PVD L + Y + I +PMD TI+K+++ Y+ + + D L+ +NA+ +N
Sbjct: 119 YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKLKNNVYRTAQAVIDDFNLMVQNALTFNGP 178
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTE-EEKRREEEEAEAQLDMQLA---QDAAHA 236
V + L F +K + LP+ E EEK+ ++ A+ ++L +D+A+A
Sbjct: 179 DHLVAQEGQKLKITF-DKQMANLPRADEVEEKKPKKSVAKPSTAIRLPLIRRDSANA 234
>gi|124487035|ref|NP_001074685.1| PH-interacting protein [Mus musculus]
gi|182888463|gb|AAI60290.1| Pleckstrin homology domain interacting protein [synthetic construct]
Length = 1821
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1285 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1344
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1345 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1402
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 IYSMSLRLSAFFEE 1416
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1155 EWGANPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1211
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1212 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1271
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1272 YNSMKKKVLSDSEEEEKDADV 1292
>gi|149019034|gb|EDL77675.1| similar to WD repeat domain 11 protein (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 863
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 326 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWRKQCQELLNLIFQCEDSEPFRQP 385
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 386 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 443
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 444 IYSMSLRLSAFFEE 457
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 196 EWGANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 252
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 253 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 312
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 313 YNSMKKKVLSDSEEEEKDADV 333
>gi|148694503|gb|EDL26450.1| mCG15223, isoform CRA_a [Mus musculus]
Length = 1778
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1242 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1301
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1302 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1359
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1360 IYSMSLRLSAFFEE 1373
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1112 EWGANPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1168
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1169 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1228
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1229 YNSMKKKVLSDSEEEEKDADV 1249
>gi|148694504|gb|EDL26451.1| mCG15223, isoform CRA_b [Mus musculus]
Length = 902
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 366 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 425
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 426 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 483
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 484 IYSMSLRLSAFFEE 497
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 236 EWGANPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 292
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 293 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 352
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 353 YNSMKKKVLSDSEEEEKDADV 373
>gi|417406756|gb|JAA50022.1| Hypothetical protein [Desmodus rotundus]
Length = 1819
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1294 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1343
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1344 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1401
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1402 RIYSMSLRLSAFFEE 1416
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1242 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1292
>gi|429242322|ref|NP_593620.3| bromodomain protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|391358177|sp|Q9HGP4.3|YK82_SCHPO RecName: Full=Bromodomain-containing protein C631.02
gi|347834104|emb|CAC05484.3| bromodomain protein (predicted) [Schizosaccharomyces pombe]
Length = 727
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 15/117 (12%)
Query: 92 RREKAAEKR-----MEELIRQFGTILRNITQHK-WAWPFMQPVDVKGLGLDDYYEVIDKP 145
RR+ AAE + ++EL+++ QH+ +A+PF +PV+ G DY++VI P
Sbjct: 387 RRKDAAEMKFCQSVLKELLKK---------QHEAYAYPFYKPVNPTACGCPDYFKVIKHP 437
Query: 146 MDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
MD T++ ++ EY +++ D+ L+FKN K+N + VH+M K L + F++ W
Sbjct: 438 MDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLW 494
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+LR + + + + PF PVD + DY +I P+D T++K+ + Y + + D+
Sbjct: 241 MLRQLRRGRDSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDM 300
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L+F N YN S V VM K L A FE + QL
Sbjct: 301 NLMFSNCFLYNGTESPVGVMGKNLQATFERQLKQL 335
>gi|426234361|ref|XP_004011164.1| PREDICTED: PH-interacting protein [Ovis aries]
Length = 1649
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1122 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1171
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1172 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1229
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1230 RIYSMSLRLSAFFEE 1244
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ + + +VR + N +N+
Sbjct: 1011 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRISSLMWEVRYIEHNTRTFNEP 1068
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1069 GSPIVKSAK 1077
>gi|392350226|ref|XP_003750599.1| PREDICTED: LOW QUALITY PROTEIN: PH-interacting protein [Rattus
norvegicus]
Length = 1773
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1236 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWRKQCQELLNLIFQCEDSEPFRQP 1295
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1296 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1353
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1354 IYSMSLRLSAFFEE 1367
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1106 EWGANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1162
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1163 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1222
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1223 YNSMKKKVLSDSEEEEKDADV 1243
>gi|392342157|ref|XP_003754519.1| PREDICTED: PH-interacting protein [Rattus norvegicus]
Length = 1784
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1247 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWRKQCQELLNLIFQCEDSEPFRQP 1306
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1307 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1364
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1365 IYSMSLRLSAFFEE 1378
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1117 EWGANPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1173
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1174 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1233
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1234 YNSMKKKVLSDSEEEEKDADV 1254
>gi|456753332|gb|JAA74146.1| pleckstrin homology domain interacting protein [Sus scrofa]
Length = 1821
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1295 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1344
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1345 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1402
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 RIYSMSLRLSAFFEE 1417
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1242 GSPIVKSAK 1250
>gi|159794742|pdb|2DWW|A Chain A, Crystal Structure Of Bromodomain-Containing Protein 4
Length = 114
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 54/83 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVDV+ LGL DY ++I P D STIK ++E++EY++ +E DVRL F N K
Sbjct: 27 YAWPFYKPVDVEALGLHDYCDIIKHPXDXSTIKSKLESREYRDAQEFGADVRLXFSNCYK 86
Query: 180 YNDERSDVHVMAKTLLAKFEEKW 202
YN +V A+ L FE ++
Sbjct: 87 YNPPDHEVVAXARKLQDVFEXRF 109
>gi|301788420|ref|XP_002929627.1| PREDICTED: PH-interacting protein-like, partial [Ailuropoda
melanoleuca]
Length = 1778
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1242 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1301
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1302 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1359
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1360 IYSMSLRLSAFFEE 1373
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1141 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1198
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ L+P +K+ EEEE +A +
Sbjct: 1199 GSPIVKSAKFVTDLLLHFIKDQTCYNLIPLYNSMKKKVLSDSEEEEKDADV 1249
>gi|281343857|gb|EFB19441.1| hypothetical protein PANDA_019859 [Ailuropoda melanoleuca]
Length = 1758
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1222 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1281
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1282 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1339
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1340 IYSMSLRLSAFFEE 1353
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1121 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1178
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ L+P +K+ EEEE +A +
Sbjct: 1179 GSPIVKSAKFVTDLLLHFIKDQTCYNLIPLYNSMKKKVLSDSEEEEKDADV 1229
>gi|350578407|ref|XP_003480360.1| PREDICTED: PH-interacting protein [Sus scrofa]
Length = 1749
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1222 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1271
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1272 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1329
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1330 RIYSMSLRLSAFFEE 1344
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1111 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1168
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1169 GSPIVKSAK 1177
>gi|149723002|ref|XP_001499092.1| PREDICTED: PH-interacting protein [Equus caballus]
Length = 1801
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1265 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1324
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1325 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1382
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1383 IYSMSLRLSAFFEE 1396
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1164 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1221
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1222 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1272
>gi|402592712|gb|EJW86639.1| bromodomain containing protein [Wuchereria bancrofti]
Length = 533
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 100 RMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKE 159
R+ +R F ++ + + + AWPF++PVD K + DYY++I +PMD TI +++ +
Sbjct: 418 RIRNTLRAFELLISDAMRQQIAWPFLKPVDAKAVP--DYYQIIKRPMDLRTIMNKLKQRL 475
Query: 160 YKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
Y ++ D RL+F+N YN+E S+++ A L EE++ ++L
Sbjct: 476 YDTPDQVIADARLIFENCRIYNEEESEIYKCANKLEQFMEERFSKIL 522
>gi|440905090|gb|ELR55520.1| PH-interacting protein, partial [Bos grunniens mutus]
Length = 1758
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1231 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1280
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1281 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1338
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1339 RIYSMSLRLSAFFEE 1353
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1120 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1177
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1178 GSPIVKSAK 1186
>gi|297478402|ref|XP_002690088.1| PREDICTED: PH-interacting protein [Bos taurus]
gi|296484265|tpg|DAA26380.1| TPA: bromodomain and WD repeat domain containing 1-like [Bos taurus]
Length = 1804
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1277 GTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1326
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1327 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1384
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1385 RIYSMSLRLSAFFEE 1399
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1166 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1223
Query: 184 RSDVHVMAK 192
S + AK
Sbjct: 1224 GSPIVKSAK 1232
>gi|32564850|ref|NP_871879.1| Protein BET-1, isoform b [Caenorhabditis elegans]
gi|351060598|emb|CCD68304.1| Protein BET-1, isoform b [Caenorhabditis elegans]
Length = 765
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AWPF +PVD + LGL DY+++I +PMD ++K +ME+ YK + DVRL+ +N
Sbjct: 281 FAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFL 340
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQL-------------------LPKVTEEEKRREEEE 220
YN VH F+ +W +L PKV + +E +E
Sbjct: 341 YNPVGDPVHSFGLRFQEVFDRRWAELGDSSSRASSVAPQSAPIAPTPKVAKSSAPKEPKE 400
Query: 221 AEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELRE 258
+ + + +A+ AK S +L +++ L +RE
Sbjct: 401 SRKEHKKETTFEASGAK-----SEDLMQINNALSMIRE 433
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ +HK WPF +PVD L + Y+E + +PMD TI+ ++++ Y +E D
Sbjct: 50 TVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDD 109
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL 194
+ VF+N +N + DV +MA+ +
Sbjct: 110 IETVFQNCYTFNGKEDDVTIMAQNV 134
>gi|410959575|ref|XP_003986381.1| PREDICTED: PH-interacting protein, partial [Felis catus]
Length = 1740
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1253 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1312
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1313 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1370
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1371 IYSMSLRLSAFFEE 1384
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1152 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1209
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ L+P +K+ EEEE +A +
Sbjct: 1210 GSPIVKSAKFVTDLLLHFIKDQTCYNLIPLYNSMKKKVLSDSEEEEKDADV 1260
>gi|157057180|ref|NP_660107.2| bromodomain and WD repeat-containing protein 1 isoform A [Mus
musculus]
gi|341940291|sp|Q921C3.2|BRWD1_MOUSE RecName: Full=Bromodomain and WD repeat-containing protein 1;
AltName: Full=WD repeat-containing protein 9
Length = 2304
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
S R++ RR +A+ + RQ +L I Q + + PF QPVD+ DY ++
Sbjct: 1298 SGRRKVHNWKRRSRASGCIESDWRRQCKALLILIFQCEDSEPFRQPVDLDEY--PDYRDI 1355
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEE 200
ID PMDF T+++ +EA Y + E C D+RL+F NA Y ++RS ++ M L A FEE
Sbjct: 1356 IDTPMDFGTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEE 1415
Query: 201 K 201
K
Sbjct: 1416 K 1416
>gi|14970591|emb|CAC44373.1| WDR9 protein, form A [Mus musculus]
Length = 2304
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
S R++ RR +A+ + RQ +L I Q + + PF QPVD+ DY ++
Sbjct: 1298 SGRRKVHNWKRRSRASGCIESDWRRQCKALLILIFQCEDSEPFRQPVDLDEY--PDYRDI 1355
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEE 200
ID PMDF T+++ +EA Y + E C D+RL+F NA Y ++RS ++ M L A FEE
Sbjct: 1356 IDTPMDFGTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEE 1415
Query: 201 K 201
K
Sbjct: 1416 K 1416
>gi|209882027|ref|XP_002142451.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
gi|209558057|gb|EEA08102.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
Length = 1877
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 6/113 (5%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K+ PF++PVD G DYY VI +PMDF+T++ ++ + Y +E +DV+ +F N
Sbjct: 168 KYGIPFLRPVDPNMDGASDYYAVIMRPMDFTTVQTKLYLRIYSQPQEFWSDVQQIFTNCF 227
Query: 179 KYNDERSDVHV---MAKTLLAKFEEKWLQLLPKVTEEE--KRREEEEAEAQLD 226
+YN SD+HV + K L K +W LL + T+E+ K++ EE +D
Sbjct: 228 QYNSVDSDIHVQGRLMKALFDKLYGEW-ALLSRQTQEDLVKQKSEESPSEWID 279
>gi|50303459|ref|XP_451671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640803|emb|CAH02064.1| KLLA0B03113p [Kluyveromyces lactis]
Length = 661
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 76 KERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKG 132
+E H P + S + K+ + +ME Q +L+ + K++ +PF++PVD
Sbjct: 255 REIHPPKTKDIYPYESNKPKSKKHQMEMKFCQ--QVLKELLSKKYSSFNYPFLEPVDPVA 312
Query: 133 LGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
L Y++ + +PMD T++K++ EY+ E DVRLVFKN +N E + V++M
Sbjct: 313 LNCPTYFDFVKEPMDLGTVQKKLNNWEYQTSEEFEHDVRLVFKNCYAFNPEGTIVNMMGH 372
Query: 193 TLLAKFEEKWLQLLPKVTEEEKRREEEEAE 222
L F KW P + EEE E E+E
Sbjct: 373 RLEDVFNSKWAD-RPVIPEEESADEGGESE 401
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T ++ + + K A PF +PVD L + Y+ I +PMD STI++++ Y+ ++ D
Sbjct: 125 TAVKAVKRLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLDAYETPEQVTDD 184
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L+ N +K+N +++ + MA+ + A FE+ L +
Sbjct: 185 FNLMVSNCIKFNGDKAVISQMARNIQASFEKHMLNM 220
>gi|148671748|gb|EDL03695.1| bromodomain and WD repeat domain containing 1, isoform CRA_b [Mus
musculus]
Length = 2269
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 82 SIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEV 141
S R++ RR +A+ + RQ +L I Q + + PF QPVD+ DY ++
Sbjct: 1263 SGRRKVHNWKRRSRASGCIESDWRRQCKALLILIFQCEDSEPFRQPVDLDEY--PDYRDI 1320
Query: 142 IDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEE 200
ID PMDF T+++ +EA Y + E C D+RL+F NA Y ++RS ++ M L A FEE
Sbjct: 1321 IDTPMDFGTVRETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEE 1380
Query: 201 K 201
K
Sbjct: 1381 K 1381
>gi|119194171|ref|XP_001247689.1| hypothetical protein CIMG_01460 [Coccidioides immitis RS]
gi|392863070|gb|EAS36227.2| transcription regulator BDF1 [Coccidioides immitis RS]
Length = 806
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L + +A PF QPVD L + Y+ +I KPMD STI+ +++ +Y+N +E+ DVR
Sbjct: 466 LHKPKHYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYENSKEMENDVR 525
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
L+FKN K+N + K L F+ KW Q
Sbjct: 526 LMFKNCYKFNIPGDPTYNAGKKLEEIFDYKWGQ 558
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F PVD L + +Y +I +PMD T++ ++++ YK V +I D +L+ N + +N
Sbjct: 277 FRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKIKSGAYKTVDQITADFKLMIDNCITFNGP 336
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
V V L + E+ L LP +E E
Sbjct: 337 EHVVTVEGMRLRDNW-ERHLTKLPSPSEVE 365
>gi|158297171|ref|XP_317442.4| AGAP008017-PA [Anopheles gambiae str. PEST]
gi|157015066|gb|EAA12387.4| AGAP008017-PA [Anopheles gambiae str. PEST]
Length = 2930
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
R + +E +++EK A KR+ + + TIL + H+ +WPF+ PV+ K Y +VI
Sbjct: 2806 RDEAKERAKQEKKATKRLLKELAVCKTILEEMELHEDSWPFLLPVNTKQF--PTYRKVIK 2863
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
PMD STIKK+++ YK+ + DVR +F N +N++ S V + + FE++W
Sbjct: 2864 SPMDLSTIKKRLQDLVYKSREDFIADVRQIFDNCEVFNEDDSPVGIAGHGMRKFFEQRWA 2923
Query: 204 QL 205
L
Sbjct: 2924 DL 2925
>gi|344264135|ref|XP_003404149.1| PREDICTED: PH-interacting protein [Loxodonta africana]
Length = 1763
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A +K+ +EL L I Q + + PF Q
Sbjct: 1234 GTSTRKKKD---HQPRRRLRNRAQSCDIQAWKKQCQEL-------LNLIFQCEDSEPFRQ 1283
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1284 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1341
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1342 RIYSMSLRLSAFFEE 1356
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E + R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1095 EWGSNPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1151
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1152 RLENRFYRRISSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1211
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1212 YNSMKKKVLSDSEEEEKDADV 1232
>gi|427795843|gb|JAA63373.1| Putative bromodomain adjacent to zinc finger domain protein 2b,
partial [Rhipicephalus pulchellus]
Length = 1933
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 85 KQQQEASRREKAAEKRMEEL--IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVI 142
K + RREK + +++L RQ IL + QHK AWPF+ PV+ K Y + I
Sbjct: 1814 KSSKSGERREKNKAQVLKDLAACRQ---ILEELEQHKDAWPFLVPVNTK--QFPSYRKFI 1868
Query: 143 DKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
KPMD ST++ ++E+ +YK E DVRL+F N +N++ S V + FE +W
Sbjct: 1869 KKPMDVSTMRSKLESNQYKCKDEFALDVRLIFDNCETFNEDDSPVGQAGHNMRNFFESRW 1928
Query: 203 LQL 205
+L
Sbjct: 1929 EEL 1931
>gi|303311489|ref|XP_003065756.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105418|gb|EER23611.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320039630|gb|EFW21564.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 806
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
L + +A PF QPVD L + Y+ +I KPMD STI+ +++ +Y+N +E+ DVR
Sbjct: 466 LHKPKHYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYENSKEMENDVR 525
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
L+FKN K+N + K L F+ KW Q
Sbjct: 526 LMFKNCYKFNIPGDPTYNAGKKLEEIFDYKWGQ 558
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F PVD L + +Y +I +PMD T++ ++++ YK V +I D +L+ N + +N
Sbjct: 277 FRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKIKSGAYKMVDQITADFKLMIDNCITFNGP 336
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
V V L + E+ L LP +E E
Sbjct: 337 EHVVTVEGMRLRDNW-ERHLTKLPSPSEVE 365
>gi|148695007|gb|EDL26954.1| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2193
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ +WPF+ PV++K + Y +VI KPMDFSTI++++ +Y N DV
Sbjct: 2097 ILTEMETHEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQYPNFETFALDV 2154
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2155 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2186
>gi|167526004|ref|XP_001747336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774171|gb|EDQ87803.1| predicted protein [Monosiga brevicollis MX1]
Length = 1632
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
R+++Q SR+ K E +EL F +L + A F++PVD L + DY+E+I
Sbjct: 589 RQKRQATSRQIK--EWPRDELKHHFSPVLERLKGMSAAECFLRPVDPIELNIPDYFEIIK 646
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 200
KPMD STI+ ++E YK+ E C D+RL+FKNA YN + V+ + + FE+
Sbjct: 647 KPMDLSTIEDKLEKGTYKDPWEFCDDMRLMFKNAWTYNPKNHVVYKFTNEVSSVFED 703
>gi|355711270|gb|AES03956.1| pleckstrin-like proteiny domain interacting protein [Mustela
putorius furo]
Length = 715
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 388 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 447
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 448 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 505
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 506 IYSMSLRLSAFFEE 519
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 287 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 344
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ L+P +K+ EEEE +A +
Sbjct: 345 GSPIVKSAKFVTDLLLHFIKDQTCYNLIPLYNSMKKKVLSDSEEEEKDADV 395
>gi|223462537|gb|AAI50815.1| Baz2b protein [Mus musculus]
Length = 2158
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ +WPF+ PV++K + Y +VI KPMDFSTI++++ +Y N DV
Sbjct: 2062 ILTEMETHEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQYPNFETFALDV 2119
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2120 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2151
>gi|62177117|ref|NP_001001182.2| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2123
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H+ +WPF+ PV++K + Y +VI KPMDFSTI++++ +Y N DV
Sbjct: 2027 ILTEMETHEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQYPNFETFALDV 2084
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
RLVF N +N++ SD+ ++ FE+KW
Sbjct: 2085 RLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2116
>gi|432090493|gb|ELK23917.1| PH-interacting protein [Myotis davidii]
Length = 1815
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 18/188 (9%)
Query: 19 PESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKER 78
P S + + F V D+ K ++ I Y + KK S+S+ ++EK+
Sbjct: 1237 PGSPIVKAAKF---VTDLLLHFIK-DQTCYNIIPLYNSMKKKVLSDSE------EEEKDA 1286
Query: 79 HVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGL 133
VP S RK++ RR +A ++ +Q +L I Q + + PF QPVD+ L
Sbjct: 1287 DVPGTSTRKRKDYQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQPVDL--L 1344
Query: 134 GLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAK 192
DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS ++ M+
Sbjct: 1345 EYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSL 1404
Query: 193 TLLAKFEE 200
L A FEE
Sbjct: 1405 RLSAFFEE 1412
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1180 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1237
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1238 GSPIVKAAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1288
>gi|119604878|gb|EAW84472.1| bromodomain containing 4, isoform CRA_c [Homo sapiens]
Length = 146
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 93 REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIK 152
+ K +++ L+R +L+ + +H++AWPF QPVD L L DYY++I PMD TIK
Sbjct: 55 KPKRQTNQLQYLLR---VVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIK 111
Query: 153 KQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDV 187
K++E Y N +E D +F N YN R +
Sbjct: 112 KRLENNYYWNAQECIQDFNTMFTNCYIYNKFRPQM 146
>gi|307103867|gb|EFN52124.1| hypothetical protein CHLNCDRAFT_27193 [Chlorella variabilis]
Length = 88
Score = 78.6 bits (192), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
+WPF PVD++ DY E + +PMDF TIK++++ Y++ E +DVRLVF NA Y
Sbjct: 1 SWPFNAPVDLRQY--PDYAETVSRPMDFGTIKRRIDVGLYRHPDEFLSDVRLVFDNARLY 58
Query: 181 NDERSDVHVMAKTL 194
N SDVHVMA TL
Sbjct: 59 NKPGSDVHVMANTL 72
>gi|260785490|ref|XP_002587794.1| hypothetical protein BRAFLDRAFT_126580 [Branchiostoma floridae]
gi|229272947|gb|EEN43805.1| hypothetical protein BRAFLDRAFT_126580 [Branchiostoma floridae]
Length = 3563
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
+ PF QPVD K LG+ DY++++ PMD STIK++++ +YK+ E C DV L+F NA Y
Sbjct: 2276 SLPFRQPVDPKLLGIPDYFDIVKHPMDLSTIKRKLDTGQYKDPWEYCDDVWLMFDNAWLY 2335
Query: 181 NDERSDVHVMAKTLLAKFEE 200
N + S V+ L FE+
Sbjct: 2336 NRKTSRVYKYCSKLAEVFEQ 2355
>gi|440632694|gb|ELR02613.1| hypothetical protein GMDG_05576 [Geomyces destructans 20631-21]
Length = 895
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF+ PVD LG+ +Y++++ PMD STI + + Y N ++ D+RL+FKN K+N
Sbjct: 549 PFLIPVDPVALGIPEYFKIVKSPMDLSTITDNLNSGHYANSKDFEADIRLMFKNCYKFNP 608
Query: 183 ERSDVHVMAKTLLAKFEEKW 202
+ V+VM + L A F +W
Sbjct: 609 PSTAVNVMGQELEAFFNSEW 628
>gi|395848313|ref|XP_003796796.1| PREDICTED: PH-interacting protein [Otolemur garnettii]
Length = 1783
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVPSI----RKQQQEASR-REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP RK Q R R +A ++ +Q +L I Q + + PF QP
Sbjct: 1247 EEEKDADVPGTSTRRRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1306
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1307 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSR 1364
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1365 IYSMSLRLSAFFEE 1378
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E + Y+ V + +VR + N +N+
Sbjct: 1146 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEP 1203
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1204 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEEEEKDADV 1254
>gi|169624656|ref|XP_001805733.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
gi|111055843|gb|EAT76963.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
Length = 906
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
Query: 68 SSTLKDKEK-ERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWA---WP 123
SS + D+ K E H PS A R+K K +EL + ++L + + K+A +P
Sbjct: 511 SSGMNDRPKREIHRPSKDLPYSSAKPRKK---KYAQEL-KFCESVLAELLKPKYAAVSYP 566
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD L + Y ++I KPMDF TI+K ++A Y++ ++ D LVF+N K+N E
Sbjct: 567 FVSPVDPVALNIPSYLKIIKKPMDFGTIEKNLKAGMYQSAKDFHADAHLVFQNCYKFNPE 626
Query: 184 RSDVHVMAKTLLAKFEEKW 202
V+ M L FE+ W
Sbjct: 627 GDAVNKMGHDLEDIFEKLW 645
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
+RN + K + F PVD L + Y E++ KPMD ST++ +++ +Y VRE D+
Sbjct: 350 IRNTKKIKVSLAFKDPVDHIALNIPTYPELVKKPMDLSTMENKLKENKYTYVREFMADLD 409
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKF 198
+ +N+ +N+++ V L A F
Sbjct: 410 QMIENSELFNNKQHPVTQAGYNLRAYF 436
>gi|384499244|gb|EIE89735.1| hypothetical protein RO3G_14446 [Rhizopus delemar RA 99-880]
Length = 570
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
WPF +PVD G DYY++I PMD STI+ + + EY N + D +L+F N KY
Sbjct: 173 TWPFERPVDAAAWGATDYYDIIQHPMDMSTIENKFKNAEYTNEDQFYDDYKLMFSNCYKY 232
Query: 181 NDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAK 237
N +VH++ K F++ W ++ K E +++ + + + +D K
Sbjct: 233 NPPHHEVHLLGKKFEEDFDKHWNKIHDKPKERAVKKQRVDQDVMITPPTTEDEVQVK 289
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
RK++++ S +KR+ L + +H A PF+QPVD + DY+++I
Sbjct: 22 RKEEEKFSEHMSVQDKRL------VTETLTKLMKHPCAGPFLQPVDPVFFNIPDYFDIIK 75
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKF 198
PMD STI Q + Y++ E DV L+ N YN+ V A+ L F
Sbjct: 76 HPMDLSTI--QTKLNNYQSKEEFIADVELMLDNCYLYNNATDPVCDQARELEKAF 128
>gi|255947958|ref|XP_002564746.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591763|emb|CAP98009.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 812
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ W PF PVD L + Y+ VI KPMD ST++ +++ +Y+N +E +DVRL+FKN
Sbjct: 479 HYNWVMPFYYPVDPVALNIPSYHSVIKKPMDLSTVQSKLKTGQYENAKEFESDVRLIFKN 538
Query: 177 AMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
++N +V + F KW Q
Sbjct: 539 CYRFNIPGDPTYVCGERAEEIFNGKWAQ 566
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
+ +PVD L + Y+ VI +PMD T++++++ +Y + + + D L+ N +N
Sbjct: 293 YKEPVDAVKLNIPQYHTVITQPMDLGTMERKLKNNQYSSPQAVADDFALMVNNTTIFNGP 352
Query: 184 RSDVHVMAKTLLAKFEEKWLQL 205
V L A F+++ L
Sbjct: 353 DHLVTQEGIKLKATFDKQMTNL 374
>gi|259145174|emb|CAY78438.1| Bdf2p [Saccharomyces cerevisiae EC1118]
Length = 638
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+PF+QPVD L L +Y++V+ PMD TI + +YK + + D+ LVF N ++N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFN 402
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM-AR 240
E ++VH M K L F WL+ + E E + EE + +
Sbjct: 403 PEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINEN 462
Query: 241 DTSN--------ELYEVDVHLDELREMLVQKCRKTSTEEKRK-LGAALTR---------- 281
D +N +L +++V L +L+ Q+ K S E KRK LG L R
Sbjct: 463 DITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDD 519
Query: 282 -----------LSPEDLGKALEIVAQSNTG---FQATAEEVELDMDAQSESTLWRL 323
LS ++ + I+ S + +E+E+D+D E+T+ R+
Sbjct: 520 LKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF++PVD L + Y+ + PMD S I+ +++ Y +V ++ +D + + N +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCL 212
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
+N S + MAK + FE+K + P+V
Sbjct: 213 NFNGPESSISSMAKRIQKYFEKKLSAMPPRV 243
>gi|190405078|gb|EDV08345.1| hypothetical protein SCRG_00567 [Saccharomyces cerevisiae RM11-1a]
Length = 643
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+PF+QPVD L L +Y++V+ PMD TI + +YK + + D+ LVF N ++N
Sbjct: 348 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFN 407
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM-AR 240
E ++VH M K L F WL+ + E E + EE + +
Sbjct: 408 PEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINEN 467
Query: 241 DTSN--------ELYEVDVHLDELREMLVQKCRKTSTEEKRK-LGAALTR---------- 281
D +N +L +++V L +L+ Q+ K S E KRK LG L R
Sbjct: 468 DITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDD 524
Query: 282 -----------LSPEDLGKALEIVAQSNTG---FQATAEEVELDMDAQSESTLWRL 323
LS ++ + I+ S + +E+E+D+D E+T+ R+
Sbjct: 525 LKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 580
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF++PVD L + Y+ + PMD S I+ +++ Y +V ++ +D + + N +
Sbjct: 158 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCL 217
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
+N S + MAK + FE+K + P+V
Sbjct: 218 NFNGPESSISSMAKRIQKYFEKKLSAMPPRV 248
>gi|6320132|ref|NP_010213.1| Bdf2p [Saccharomyces cerevisiae S288c]
gi|74583636|sp|Q07442.1|BDF2_YEAST RecName: Full=Bromodomain-containing factor 2
gi|1431082|emb|CAA98636.1| BDF2 [Saccharomyces cerevisiae]
gi|285810964|tpg|DAA11788.1| TPA: Bdf2p [Saccharomyces cerevisiae S288c]
gi|392300048|gb|EIW11139.1| Bdf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 638
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+PF+QPVD L L +Y++V+ PMD TI + +YK + + D+ LVF N ++N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFN 402
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM-AR 240
E ++VH M K L F WL+ + E E + EE + +
Sbjct: 403 PEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINEN 462
Query: 241 DTSN--------ELYEVDVHLDELREMLVQKCRKTSTEEKRK-LGAALTR---------- 281
D +N +L +++V L +L+ Q+ K S E KRK LG L R
Sbjct: 463 DITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDD 519
Query: 282 -----------LSPEDLGKALEIVAQSNTG---FQATAEEVELDMDAQSESTLWRL 323
LS ++ + I+ S + +E+E+D+D E+T+ R+
Sbjct: 520 LKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF++PVD L + Y+ + PMD S I+ +++ Y +V ++ +D + + N +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCL 212
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
+N S + MAK + FE+K + P+V
Sbjct: 213 NFNGPESSISSMAKRIQKYFEKKLSAMPPRV 243
>gi|427795587|gb|JAA63245.1| Putative bromodomain adjacent to zinc finger domain protein 2b,
partial [Rhipicephalus pulchellus]
Length = 1435
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 85 KQQQEASRREKAAEKRMEEL--IRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVI 142
K + RREK + +++L RQ IL + QHK AWPF+ PV+ K Y + I
Sbjct: 1316 KSSKSGERREKNKAQVLKDLAACRQ---ILEELEQHKDAWPFLVPVNTK--QFPSYRKFI 1370
Query: 143 DKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
KPMD ST++ ++E+ +YK E DVRL+F N +N++ S V + FE +W
Sbjct: 1371 KKPMDVSTMRSKLESNQYKCKDEFALDVRLIFDNCETFNEDDSPVGQAGHNMRNFFESRW 1430
Query: 203 LQL 205
+L
Sbjct: 1431 EEL 1433
>gi|170579184|ref|XP_001894716.1| Bromodomain containing protein [Brugia malayi]
gi|158598584|gb|EDP36451.1| Bromodomain containing protein [Brugia malayi]
Length = 1389
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQ 154
+ + R+ +R F ++ + + + AWPF++PVD K + DYY++I +PMD TI +
Sbjct: 1269 RETDNRIRNTLRAFELLISDAMRQQIAWPFLKPVDAKAV--PDYYQIIKRPMDLRTIMNK 1326
Query: 155 MEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLL 206
++ + Y ++ D RL+F+N YN+E S+++ A L EE++ ++L
Sbjct: 1327 LKQRLYDTPDQVIADARLIFENCRIYNEEESEIYKCANKLEQFMEERFSKIL 1378
>gi|349605116|gb|AEQ00459.1| Bromodomain and WD repeat-containing protein 1-like protein,
partial [Equus caballus]
Length = 615
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD+ + DY ++ID PMDF T+++ +EA Y + E C D+RL+F NA Y
Sbjct: 61 PFRQPVDL--VEYPDYRDIIDTPMDFGTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTP 118
Query: 182 DERSDVHVMAKTLLAKFEEK 201
++RS ++ M L A FEEK
Sbjct: 119 NKRSKIYSMTLRLSALFEEK 138
>gi|1749522|dbj|BAA13819.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 92 RREKAAEKRMEELIRQFGTILRNIT--QHK-WAWPFMQPVDVKGLGLDDYYEVIDKPMDF 148
RR+ AAE + + ++L+ + QH+ +A+PF +PV+ G DY++VI PMD
Sbjct: 35 RRKDAAEMKFCQ------SVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDL 88
Query: 149 STIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
T++ ++ EY +++ D+ L+FKN K+N + VH+M K L + F++ W
Sbjct: 89 GTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLW 142
>gi|327268468|ref|XP_003219019.1| PREDICTED: bromodomain and WD repeat-containing protein 1-like,
partial [Anolis carolinensis]
Length = 2533
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD+ DY E+ID PMD ST+K+ +EA Y E+C D+RL+F NA Y
Sbjct: 1345 PFRQPVDLNQY--QDYREIIDTPMDLSTVKETLEAGNYDTPVELCKDIRLIFSNAKAYTP 1402
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLL 206
++RS ++ M + A FEEK +LL
Sbjct: 1403 NKRSKIYSMTLRISALFEEKIRKLL 1427
>gi|74189540|dbj|BAE36779.1| unnamed protein product [Mus musculus]
Length = 714
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 63 SNSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAW 122
++ G+ST K K+ H P R + + S +A +K+ +EL L I Q + +
Sbjct: 546 ADVPGTSTRKRKD---HQPRRRLRNRAQSYDIQAWKKQCQEL-------LNLIFQCEDSE 595
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y
Sbjct: 596 PFRQPVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTP 653
Query: 182 DERSDVHVMAKTLLAKFEE 200
+RS ++ M+ L A FEE
Sbjct: 654 SKRSRIYSMSLRLSAFFEE 672
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 411 EWGANPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 467
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAK 192
++E + Y+ + +VR + N +N+ S + AK
Sbjct: 468 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAK 506
>gi|405959089|gb|EKC25157.1| Bromodomain adjacent to zinc finger domain protein 1A [Crassostrea
gigas]
Length = 1488
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
I+ ++ +H+ +WPF++PV+ K + DYY++I PMDFSTI+ +M + EY V E+ +DV
Sbjct: 1378 IVNDLVKHEDSWPFLKPVNKKLV--PDYYDIIAIPMDFSTIRNKMNSYEYVEVSELISDV 1435
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
R +F N +YN + + + TL FE++
Sbjct: 1436 RQIFSNCFEYNKKTTTEYKAGSTLSKMFEKR 1466
>gi|340374210|ref|XP_003385631.1| PREDICTED: hypothetical protein LOC100637162 [Amphimedon
queenslandica]
Length = 2504
Score = 78.2 bits (191), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
Query: 84 RKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVID 143
R++Q+ R + A+ + ++ Q ++L ++ + AWPF++PV+ K + DYY VI
Sbjct: 2385 RREQRRKPGRPRGAKDDL--ILCQ--SLLMDLEEQDDAWPFLEPVNRKKI--PDYYRVIK 2438
Query: 144 KPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWL 203
KPMDF T+K+++ +Y N + DVRL+F N YN++ S + + + FE++W
Sbjct: 2439 KPMDFHTVKQKLREGKYPNKESLALDVRLIFDNCAFYNEDNSQIGLAGHNMRQYFEKRWT 2498
Query: 204 QLL 206
+++
Sbjct: 2499 EMM 2501
>gi|323349464|gb|EGA83688.1| Bdf2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 633
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+PF+QPVD L L +Y++V+ PMD TI + +YK + + D+ LVF N ++N
Sbjct: 338 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFN 397
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM-AR 240
E ++VH M K L F WL+ + E E + EE + +
Sbjct: 398 PEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINEN 457
Query: 241 DTSN--------ELYEVDVHLDELREMLVQKCRKTSTEEKRK-LGAALTR---------- 281
D +N +L +++V L +L+ Q+ K S E KRK LG L R
Sbjct: 458 DITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDD 514
Query: 282 -----------LSPEDLGKALEIVAQSNTG---FQATAEEVELDMDAQSESTLWRL 323
LS ++ + I+ S + +E+E+D+D E+T+ R+
Sbjct: 515 LKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 570
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF++PVD L + Y+ + PMD S I+ +++ Y +V ++ +D + + N +
Sbjct: 148 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCL 207
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
+N S + MAK + FE+K + P+V
Sbjct: 208 NFNGPESSISSMAKRIQKYFEKKLSAMPPRV 238
>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 968
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 69 STLKDKEKERH-VPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWP---- 123
STL D +R VP+ R Q+ R +K K+ E ++ +L+ +T K+ WP
Sbjct: 575 STLADGRPKRAIVPTKRNQEFGGGRPKK---KKYELQLKFCDEVLKELTATKY-WPINQY 630
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F PVD L + Y+++I KPMD TI+ ++ Y+ ++ DVRLVFKN K+N E
Sbjct: 631 FTHPVDPVALNIPTYFQIIKKPMDLGTIRTKLNNNVYEKAKDFEEDVRLVFKNCYKFNPE 690
Query: 184 RSDVHVMAKTLLAKFEEKW 202
V+ L F +KW
Sbjct: 691 GDLVNSAGHQLEELFNKKW 709
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
++ N+ + + F PVD L + Y+EVI PMD TI ++++ EY +V +D
Sbjct: 412 VISNLKKSNASAAFRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRNEYTSVAAFISDF 471
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLD 226
L+ N +K+N V A+ + + F + ++ LPK + EE ++ ++A +L+
Sbjct: 472 ELIVDNCVKFNGPDHGVTQAARKMQSSFNSQ-MRNLPKASIEEPPKDNKKAAKKLE 526
>gi|198456597|ref|XP_001360386.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
gi|198135670|gb|EAL24961.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
Length = 265
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K AW F +P+D LGL DY++++ KPMD ++I+ +++A Y N E DVRL+F N
Sbjct: 39 KLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNADEFVRDVRLMFDNTY 98
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQL 205
Y H MAK L A FE + ++
Sbjct: 99 LYTTPDHLCHQMAKKLQAIFEAMFFEI 125
>gi|156633549|sp|Q8VDD9.2|PHIP_MOUSE RecName: Full=PH-interacting protein; Short=PHIP; AltName: Full=IRS-1
PH domain-binding protein; AltName: Full=Neuronal
differentiation-related protein; Short=NDRP; AltName:
Full=WD repeat-containing protein 11
Length = 1821
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1285 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1344
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N Y +RS
Sbjct: 1345 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNFKAYTPSKRSR 1402
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 IYSMSLRLSAFFEE 1416
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1155 EWGANPRDEECERIVGGINQLMTLDI-ASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1211
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1212 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1271
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1272 YNSMKKKVLSDSEEEEKDADV 1292
>gi|121707746|ref|XP_001271928.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
gi|119400076|gb|EAW10502.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
Length = 840
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 118 HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNA 177
+ WA PF PVD L + Y+ +I KPMD ST++ +++ +Y+N +E DVR +FKN
Sbjct: 499 YTWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLKTGQYENAKEFEVDVRQIFKNC 558
Query: 178 MKYNDERSDVHVMAKTLLAKFEEKWLQ 204
K+N ++ + FE KW Q
Sbjct: 559 FKFNIPGDPTYMAGQRFQEIFENKWAQ 585
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F +PVD + + Y ++I PMD TI+++++ EYK + + D L+ +NA+ +N
Sbjct: 308 FREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNEYKAAQAVVNDFHLMVQNAVTFNGP 367
Query: 184 RSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
V L FE++ + LPK E E
Sbjct: 368 DHLVSQEGMKLQGTFEKQMVN-LPKPDEVE 396
>gi|17976802|emb|CAC83119.1| WD repeat domain 11 protein [Mus musculus]
Length = 1779
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 73 DKEKERHVP--SIRKQQQEASRRE---KAAEKRMEELIRQFGTILRNITQHKWAWPFMQP 127
++EK+ VP S RK++ RR +A ++ +Q +L I Q + + PF QP
Sbjct: 1285 EEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQAWKKQCQELLNLIFQCEDSEPFRQP 1344
Query: 128 VDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSD 186
VD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N Y +RS
Sbjct: 1345 VDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNFKAYTPSKRSR 1402
Query: 187 VHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1403 IYSMSLRLSAFFEE 1416
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 94 EKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKK 153
E A R EE R G I + +T A F+ PVD++ + Y V+ P D STIK+
Sbjct: 1155 EWGANPRDEECERIVGGINQLMTL-DIASAFVAPVDLQAYPM--YCTVVAYPTDLSTIKQ 1211
Query: 154 QMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKT---LLAKF--EEKWLQLLPK 208
++E + Y+ + +VR + N +N+ S + AK LL F ++ ++P
Sbjct: 1212 RLENRFYRRFSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPL 1271
Query: 209 VTEEEKR----REEEEAEAQL 225
+K+ EEEE +A +
Sbjct: 1272 YNSMKKKVLSDSEEEEKDADV 1292
>gi|148671749|gb|EDL03696.1| bromodomain and WD repeat domain containing 1, isoform CRA_c [Mus
musculus]
Length = 2064
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 92 RREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
RR +A+ + RQ +L I Q + + PF QPVD+ DY ++ID PMDF T+
Sbjct: 1193 RRSRASGCIESDWRRQCKALLILIFQCEDSEPFRQPVDLDEY--PDYRDIIDTPMDFGTV 1250
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEEK 201
++ +EA Y + E C D+RL+F NA Y ++RS ++ M L A FEEK
Sbjct: 1251 RETLEAGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEK 1301
>gi|448085671|ref|XP_004195918.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359377340|emb|CCE85723.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 637
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T ++ I + + A PF+ PVD L + YY I +PMD STI++++ Y++ ++ D
Sbjct: 154 TTIKAIKRLRDAGPFLHPVDTVKLNVPLYYNYIKRPMDLSTIERKIAVNAYEDPSQVVDD 213
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
L+ N +K+N E S + MAK A FE+ L + PKV
Sbjct: 214 FNLMVSNCIKFNGENSGISKMAKNTQAHFEKHMLNIPPKV 253
>gi|354493298|ref|XP_003508779.1| PREDICTED: bromodomain and WD repeat-containing protein 1 [Cricetulus
griseus]
Length = 2307
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ +L I Q + + PF QPVD+ + DY ++ID PMDF T+++ +EA Y + E
Sbjct: 1281 RQCKALLILIFQCEDSEPFRQPVDL--VEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVE 1338
Query: 166 ICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEEK 201
C D+RL+F NA Y ++RS ++ M L A FEEK
Sbjct: 1339 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEK 1375
>gi|308498241|ref|XP_003111307.1| CRE-BET-1 protein [Caenorhabditis remanei]
gi|308240855|gb|EFO84807.1| CRE-BET-1 protein [Caenorhabditis remanei]
Length = 856
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 78 RHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDD 137
R VP ++K E + + K +L+ +F + N ++ WPF PV+ LGL D
Sbjct: 230 RDVPVVKK---EVHQPLHPSLKPCSKLLSEFFSKKYN----EFTWPFHDPVNAAELGLHD 282
Query: 138 YYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAK 197
Y+++I +PMD TIK+++E EYK + D+RL+ N YN VH K
Sbjct: 283 YHKIIKEPMDMKTIKRKLECGEYKEPADFERDIRLMLNNCFIYNPIGDPVHNFGKKFEEV 342
Query: 198 FEEKWLQL 205
F+++W ++
Sbjct: 343 FDKRWAEM 350
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
T+L+ +HK WPF +PVD L + Y+E + +PMD TI+ ++++ Y +E D
Sbjct: 50 TVLKEAAKHKHVWPFQKPVDAVTLCIPLYHERVLRPMDLKTIESRLKSTYYTCAQECIDD 109
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL 194
+ VF N +N + DV +MA+ +
Sbjct: 110 IETVFNNCYTFNGKEDDVTIMAQNV 134
>gi|344257246|gb|EGW13350.1| Bromodomain and WD repeat-containing protein 1 [Cricetulus griseus]
Length = 2173
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
RQ +L I Q + + PF QPVD+ + DY ++ID PMDF T+++ +EA Y + E
Sbjct: 1234 RQCKALLILIFQCEDSEPFRQPVDL--VEYPDYRDIIDTPMDFGTVRETLEAGNYDSPVE 1291
Query: 166 ICTDVRLVFKNAMKYN-DERSDVHVMAKTLLAKFEEK 201
C D+RL+F NA Y ++RS ++ M L A FEEK
Sbjct: 1292 FCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEK 1328
>gi|348508408|ref|XP_003441746.1| PREDICTED: bromodomain and WD repeat-containing protein 1
[Oreochromis niloticus]
Length = 2183
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD + DY+++ID PMDF T+K+ +E Y+N E+C D RL+F NA Y
Sbjct: 1319 PFRQPVDPQNY--PDYHDIIDTPMDFGTVKRTLEEDRYENPTELCKDTRLIFANAKAYTP 1376
Query: 182 DERSDVHVMAKTLLAKFEEK 201
++RS ++ M L A FEE+
Sbjct: 1377 NKRSKIYSMTLRLSAFFEER 1396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
A PF PVD+ + Y VI P D TI+ ++ + Y+ + + D R + NA +
Sbjct: 1186 AAPFSGPVDL--VQYPTYCTVIAYPTDLGTIRLRLINRFYRRLSALIWDARYIAHNARTF 1243
Query: 181 NDERSDVHVMAKTL---LAKF 198
N+ RS + AK + L KF
Sbjct: 1244 NEPRSKIAHSAKIITNVLQKF 1264
>gi|401840059|gb|EJT42981.1| BDF1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 695
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 129/301 (42%), Gaps = 60/301 (19%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
K KR+++ ++ IL+ + + A +PF++PVD + L Y++ + +PMD TI
Sbjct: 317 KPKSKRLQQAMKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTI 376
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTE 211
K++ EY+ + + DVRLVFKN K+N + + V++M L F KW P + E
Sbjct: 377 AKKLNDWEYQTMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKWAD-RPNLDE 435
Query: 212 ----EEKRR-------EEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVDVHLDELREML 260
E+ R E E +E+ +D + + A + +L + V L +L++
Sbjct: 436 YDSDEDSRNQGDYEDYESEYSESDIDETIITNPAIQYLEE----QLARMKVELQQLKKQE 491
Query: 261 VQKCRK---------------------------------------TSTEEKRKLGAALTR 281
++K RK + + KR + +
Sbjct: 492 LEKIRKERRLARGSKKRGKRSKGRSGSKSASSHGRRDKKNKLKTVVTYDMKRIITERIND 551
Query: 282 LSPEDLGKALEIVAQSNTGFQATAEEVELDMDAQSESTLWRL-KFFVKDALKSQGNNNNN 340
L L +A++I+ +S + +EVELD+D T+ L F + S G +N
Sbjct: 552 LPTSKLERAIDIIKKSMPNI-SEDDEVELDLDTLDNHTILTLYNTFFRQYESSSGTSNGL 610
Query: 341 D 341
D
Sbjct: 611 D 611
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF+QPVD L + Y+ + +PMD STI++++ Y+ +I D L+ N++
Sbjct: 177 KDARPFLQPVDPVKLDIPFYFNYVKRPMDLSTIERKLNVGAYEFPEQITEDFNLMVNNSI 236
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQL 205
++N + + MA+ + A FE+ L +
Sbjct: 237 RFNGPNAGISQMARNIQASFEKHMLNM 263
>gi|395534504|ref|XP_003769281.1| PREDICTED: PH-interacting protein [Sarcophilus harrisii]
Length = 1790
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S +A + +EL L I Q + + PF Q
Sbjct: 1262 GTSTRKRKD---HQPRRRLRNRAQSYDTQAWRNQCQEL-------LNLIFQCEDSEPFRQ 1311
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1312 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1369
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1370 RIYSMSLRLSAFFEE 1384
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E++ Y+ V + +VR + N +N+
Sbjct: 1152 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLESRFYRRVSSLMWEVRYIEHNTRTFNEP 1209
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1210 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNAMKKKVLSDSEEEEKDADV 1260
>gi|207346961|gb|EDZ73294.1| YDL070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 614
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 122 WPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN 181
+PF+QPVD L L +Y++V+ PMD TI + +YK + + D+ LVF N ++N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFN 402
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKM-AR 240
E ++VH M K L F WL+ + E E + EE + +
Sbjct: 403 PEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINEN 462
Query: 241 DTSN--------ELYEVDVHLDELREMLVQKCRKTSTEEKRK-LGAALTR---------- 281
D +N +L +++V L +L+ Q+ K S E KRK LG L R
Sbjct: 463 DITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDD 519
Query: 282 -----------LSPEDLGKALEIVAQSNTG---FQATAEEVELDMDAQSESTLWRL 323
LS ++ + I+ S + +E+E+D+D E+T+ R+
Sbjct: 520 LKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K A PF++PVD L + Y+ + PMD S I+ +++ Y +V ++ +D + + N +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCL 212
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
+N S + MAK + FE+K + P+V
Sbjct: 213 NFNGPESSISSMAKRIQKYFEKKLSAMPPRV 243
>gi|432876083|ref|XP_004072968.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 494
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY++VI PMD TIKK++E Y + E D
Sbjct: 42 VVVKTLWKHQFAWPFYQPVDAIKLCLWDYHKVIKNPMDMGTIKKRLENNYYWSASEAMQD 101
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
+F N YN D+ +MA+ L F +K Q+
Sbjct: 102 FNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 149 STIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
S + K+M+ EY + + TDVRL+F N KYN +V MA+ L FE ++ ++
Sbjct: 171 SILPKKMDKSEYSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 227
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 268 STEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQ-ATAEEVELDMDAQSESTLWRLKFF 326
S +EKR+L + RL E LG+ + I+ + + +E+E+D + STL L+ +
Sbjct: 383 SYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPSTLRELERY 442
Query: 327 VKDALK 332
VK L+
Sbjct: 443 VKSCLQ 448
>gi|326680215|ref|XP_002666866.2| PREDICTED: cat eye syndrome critical region protein 2 [Danio rerio]
Length = 936
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
+L + HK AWPFM+PVD +Y+E+I PMD STI++++ EY E DV
Sbjct: 410 VLEALKAHKDAWPFMEPVDESYA--PNYHEIIQTPMDLSTIERKLNDGEYLAKDEFVADV 467
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLP 207
+L+F N ++YN E S+ +MA++L F L+ P
Sbjct: 468 KLMFGNCLEYNGEESEYTIMAESLERCFTRALLKHFP 504
>gi|344294785|ref|XP_003419096.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain and WD repeat-containing
protein 1-like [Loxodonta africana]
Length = 2405
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD+ + DY E+ID PMDF T+++ +EA Y + E C D+RL+F NA Y
Sbjct: 1411 PFRQPVDL--VEYPDYREIIDTPMDFGTVRETLEAGNYDSPLEFCKDIRLIFSNAKAYTP 1468
Query: 182 DERSDVHVMAKTLLAKFEEK 201
++RS ++ M L A FEEK
Sbjct: 1469 NKRSKIYSMTLRLSALFEEK 1488
>gi|149237571|ref|XP_001524662.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451259|gb|EDK45515.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 788
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 105 IRQFGTILRNITQHK---WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
+R G ++ + K + +PF+ PVD L + +Y++++ PMDF TI+ ++ +Y+
Sbjct: 434 LRFCGQTIKELMSKKHQNYNFPFLAPVDAVALNIPNYHDIVKHPMDFGTIQSKLTNNQYE 493
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQ 204
+ + DV+LVF N +N E +DV++M + A F++KW Q
Sbjct: 494 SGDDFEKDVKLVFHNCYLFNPEGTDVNMMGHRMEAVFDKKWAQ 536
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ I + K A PF+ PVD L + YY I +PMD STI++++ AK Y+++ + D
Sbjct: 266 IKAIKRLKDAAPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKLNAKAYEDISQFADDFN 325
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPK-----------------VTEEEK 214
L+ N K+N E + + MA + A FE+ L PK VT K
Sbjct: 326 LMVANCKKFNGETAGISRMATNIQAHFEKHMLNAPPKELPVGVATHTSASSPEAVTPTSK 385
Query: 215 RREEEEAEAQ 224
RR E AQ
Sbjct: 386 RRVAAETNAQ 395
>gi|345323444|ref|XP_001510724.2| PREDICTED: bromodomain and WD repeat-containing protein 1
[Ornithorhynchus anatinus]
Length = 2447
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD+ + DY ++ID PMDF T+++ +EA Y + E+C D+RL+F NA Y
Sbjct: 1293 PFRQPVDL--VEYPDYRDIIDTPMDFGTVRETLEAGNYDSPLELCKDIRLIFSNAKAYTP 1350
Query: 182 DERSDVHVMAKTLLAKFEEK 201
++RS ++ M L A FEEK
Sbjct: 1351 NKRSKIYSMTLRLSALFEEK 1370
>gi|223998448|ref|XP_002288897.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976005|gb|EED94333.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 316
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%)
Query: 96 AAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQM 155
A + + E +R+ I+ N+ + PF +PVD KG+ L DY +V+ + MD T+KK++
Sbjct: 10 ATPQEVAESLRRMKKIVDNLLARADSVPFREPVDWKGMELYDYPKVVKRMMDLGTVKKKL 69
Query: 156 EAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEE 212
+Y + E DVR V+KN M YN + SD + +A+ +FEE++ +++ + E+
Sbjct: 70 TGGKYADASECADDVRQVWKNCMLYNADGSDFYALAELFSRRFEERFQKIMDEFGED 126
>gi|47210344|emb|CAF96012.1| unnamed protein product [Tetraodon nigroviridis]
Length = 261
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 91 SRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFST 150
SRR A ++ L R +++ + +H ++WPF QPVD LGL DYY VI PMD ST
Sbjct: 14 SRRPGRATNQLSYLER---VVIKALWRHPFSWPFQQPVDAVALGLLDYYTVITNPMDLST 70
Query: 151 IKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
I K+++ K Y E D+ +F N YN+
Sbjct: 71 ITKRLKNKYYWQASECIQDLNTMFSNCYAYNE 102
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%)
Query: 117 QHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKN 176
+ +AWPF PVDV LGL DY+++I +PMD STI+K+M+ EY E DV+L+F N
Sbjct: 183 HYAYAWPFYVPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEYAEAAEFAADVQLMFSN 242
Query: 177 AMKYNDERSDVHVMAKTL 194
KYN +V MA+ L
Sbjct: 243 CYKYNPPSHEVVHMARKL 260
>gi|395146565|gb|AFN53717.1| putative bromodomain-containing protein [Linum usitatissimum]
Length = 216
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%)
Query: 106 RQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVRE 165
+Q +L+ + H + W F +PVD L + DY+ +I PMD TI ++ K+Y +
Sbjct: 7 QQCSALLKVLLGHPYGWIFSKPVDPVELNIPDYFTIITNPMDLGTINSKLSKKKYFGAED 66
Query: 166 ICTDVRLVFKNAMKYNDERSDVHVMAKTLL 195
DVRL F NAM YN + VH A L+
Sbjct: 67 FAADVRLTFANAMLYNPPSNSVHTTALELV 96
>gi|327261861|ref|XP_003215745.1| PREDICTED: PH-interacting protein-like [Anolis carolinensis]
Length = 1837
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 13/144 (9%)
Query: 64 NSKGSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWP 123
N G+ST K K+ H P R + + S +A + + +EL L I Q + + P
Sbjct: 1298 NMPGTSTRKRKD---HQPKRRLRNRAQSYDIQAWKWQCQEL-------LNLIFQCEDSEP 1347
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND- 182
F QPVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y
Sbjct: 1348 FRQPVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKVYTPC 1405
Query: 183 ERSDVHVMAKTLLAKFEEKWLQLL 206
+RS ++ M+ L A FEE +L
Sbjct: 1406 KRSRIYSMSLRLSAFFEEHISSIL 1429
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD L Y V+ P D STIK+++E + Y+ + + +VR + N +N+
Sbjct: 1190 FVAPVDF--LAYPMYCTVVAYPTDLSTIKQRLENRFYRRLSSLMWEVRYIEYNTRTFNEP 1247
Query: 184 RSDVHVMAKT---LLAKF 198
S + AK LL +F
Sbjct: 1248 GSPIVKSAKFVTDLLLQF 1265
>gi|258567404|ref|XP_002584446.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905892|gb|EEP80293.1| predicted protein [Uncinocarpus reesii 1704]
Length = 807
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 118 HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNA 177
+ A PF QPVD L + Y+ +I KPMD STI+ +++ +Y+N +E+ DVRL+F+N
Sbjct: 474 YNLASPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQTGQYENSKEMENDVRLMFRNC 533
Query: 178 MKYNDERSDVHVMAKTLLAKFEEKWLQ 204
K+N + K L F+ KW Q
Sbjct: 534 YKFNIPGDPTYNAGKKLEEIFDSKWAQ 560
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F PVD L + +Y +I PMD T++++++ YK E+ D L+ N + +N
Sbjct: 279 FRTPVDPVKLNIPNYPLIIKHPMDMHTMEEKVKHGAYKTADEVIADFNLIVDNCVTFNGP 338
Query: 184 RSDVHVMAKTLLAKFEEKW---LQLLPKVTEEE 213
HV+ L + +E W L LP E E
Sbjct: 339 E---HVVTIECL-RLKENWERHLAKLPSPNEVE 367
>gi|150866686|ref|XP_001386360.2| hypothetical protein PICST_73625 [Scheffersomyces stipitis CBS
6054]
gi|149387942|gb|ABN68331.2| transcription factor [Scheffersomyces stipitis CBS 6054]
Length = 636
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+ +PF+ PVD L + +Y++V+ +PMD TI+ ++ +Y+N E D+RLVFKN
Sbjct: 323 YNFPFVAPVDPVALNIPNYFKVVKEPMDLGTIQSKLTNNQYENGDEFERDIRLVFKNCYI 382
Query: 180 YNDERSDVHVMAKTLLAKFEEKW 202
+N E S+V++M L A F+++W
Sbjct: 383 FNPEGSEVNMMGHRLEAVFDKRW 405
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ I + + A PF+ PVD+ L + YY I +PMD STI+ ++ Y++ +I D
Sbjct: 142 IKAIKRLRDAVPFLHPVDIVKLNIPFYYNYIPRPMDLSTIETKVHVNAYEDSNQIVEDFN 201
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
L+ N K+N E + + MA + A FE+ L PKV
Sbjct: 202 LMVANCKKFNGENAGISKMADNIQAHFEKHMLNFPPKV 239
>gi|126310257|ref|XP_001366020.1| PREDICTED: PH-interacting protein [Monodelphis domestica]
Length = 1822
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 67 GSSTLKDKEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQ 126
G+ST K K+ H P R + + S A + +EL L I Q + + PF Q
Sbjct: 1294 GTSTRKRKD---HQPRRRLRNRAQSYDTHAWRNQCQEL-------LNLIFQCEDSEPFRQ 1343
Query: 127 PVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERS 185
PVD+ L DY ++ID PMDF+T+++ +EA Y++ E+C DVRL+F N+ Y +RS
Sbjct: 1344 PVDL--LEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRS 1401
Query: 186 DVHVMAKTLLAKFEE 200
++ M+ L A FEE
Sbjct: 1402 RIYSMSLRLSAFFEE 1416
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 124 FMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDE 183
F+ PVD++ + Y V+ P D STIK+++E++ Y+ V + +VR + N +N+
Sbjct: 1184 FVAPVDLQAYPM--YCTVVAYPTDLSTIKQRLESRFYRRVSSLMWEVRYIEHNTRTFNEP 1241
Query: 184 RSDVHVMAKT---LLAKF--EEKWLQLLPKVTEEEKR----REEEEAEAQL 225
S + AK LL F ++ ++P +K+ EEEE +A +
Sbjct: 1242 GSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNTMKKKVLSDSEEEEKDADV 1292
>gi|387014802|gb|AFJ49520.1| Bromodomain and WD repeat domain containing 1 [Crotalus adamanteus]
Length = 2517
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 7/125 (5%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD++ DY E+ID PMD +T+K+ +EA+ Y E+C DVRL+F NA Y
Sbjct: 1336 PFRQPVDLEQY--PDYREIIDTPMDLATVKETLEAENYDTPVELCKDVRLIFSNAKAYTP 1393
Query: 182 DERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE---EEEAEAQLDMQLAQDAAH-AK 237
++RS ++ M L A FEEK +++ +K E E ++ L + A H AK
Sbjct: 1394 NKRSKIYSMTLRLSALFEEKIRRIIFDYRTGQKHNERIWRSERSSRKLQSLNKSAQHSAK 1453
Query: 238 MARDT 242
+ R+T
Sbjct: 1454 ILRNT 1458
>gi|195149830|ref|XP_002015858.1| GL11280 [Drosophila persimilis]
gi|194109705|gb|EDW31748.1| GL11280 [Drosophila persimilis]
Length = 265
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 119 KWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAM 178
K AW F +P+D LGL DY++++ KPMD ++I+ +++A Y N E DVRL+F N
Sbjct: 39 KLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAGLYVNADEFVRDVRLMFDNTY 98
Query: 179 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDA----- 233
Y H MAK L A FE + ++ T+ E + + + DA
Sbjct: 99 LYTTPDHLCHQMAKKLQAIFEAMFFEI--ASTDSSDTITETDVSSMFPIATIPDAPINPH 156
Query: 234 --AHAKMARDTSNELYEVDVHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKAL 291
KM R +L + R R + +E LG L L E L + +
Sbjct: 157 KDGGVKMTRARRQQL--------QSRSANEAAVRPWTAKENNHLGDRLQELKGEVLHRVI 208
Query: 292 EIV 294
I+
Sbjct: 209 HII 211
>gi|417406586|gb|JAA49943.1| Hypothetical protein [Desmodus rotundus]
Length = 1541
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Query: 19 PESDVAEVESFTLRVDDIFQKVDKLEERVNEIEQFYLNASKKQGSNSKGSSTLKDKEKER 78
PES +A ++ D K K ++ + E + + +Q + S S L R
Sbjct: 1242 PESVIARSAK---KITDQLLKFIKNQDCTDISELSITSENDEQNAKSLDDSDLPKTSSGR 1298
Query: 79 HVPSIRKQQQEASR-REKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDD 137
V + +K+ +AS E +K+ +EL+ I Q + + PF QPVD+ + D
Sbjct: 1299 RVHNWKKRSSKASNCVESNWKKQCKELVNL-------IFQCEDSEPFRQPVDL--VEYPD 1349
Query: 138 YYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN-DERSDVHVMAKTLLA 196
Y ++ID PMDF T+++ +EA+ Y + E C D+RL+F NA Y ++RS ++ M L A
Sbjct: 1350 YRDIIDTPMDFGTVRETLEAENYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSA 1409
Query: 197 KFEEK 201
FEEK
Sbjct: 1410 LFEEK 1414
>gi|365759249|gb|EHN01049.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 695
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWA---WPFMQPVDVKGLGLDDYYEVIDKPMDFSTI 151
K KR+++ ++ IL+ + + A +PF++PVD + L Y++ + +PMD TI
Sbjct: 317 KPKSKRLQQAMKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTI 376
Query: 152 KKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
K++ EY+ + + DVRLVFKN K+N + + V++M L F KW
Sbjct: 377 AKKLNDWEYQTMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKW 427
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%)
Query: 112 LRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVR 171
++ + + K A PF+QPVD L + Y+ + +PMD STI++++ Y+ +I D
Sbjct: 170 VKAVKRLKDARPFLQPVDPVKLDIPFYFNYVKRPMDLSTIERKLNVGAYEFPEQITEDFN 229
Query: 172 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
L+ N++++N + + MA+ + A FE+ L +
Sbjct: 230 LMVNNSIRFNGPNAGISQMARNIQASFEKHMLNM 263
>gi|397641904|gb|EJK74909.1| hypothetical protein THAOC_03385, partial [Thalassiosira oceanica]
Length = 273
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYND 182
PF + VD K LGL DY ++I PMD T+K+++ +YK++ E DVR ++KN M YN
Sbjct: 92 PFREAVDWKTLGLFDYPQIIKHPMDLGTVKRKINEGKYKSLHEAGDDVRQIWKNCMTYNA 151
Query: 183 ERSDVHVMAKTLLAKFEEKWLQLL 206
+ SD + +A+++ KFE+K+ +LL
Sbjct: 152 DGSDFYNLAESMAKKFEDKFQKLL 175
>gi|268564300|ref|XP_002639068.1| C. briggsae CBR-TAG-332 protein [Caenorhabditis briggsae]
Length = 747
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%)
Query: 120 WAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMK 179
+AW F +PVD +GL DY+ +I PMD TIKK++EA +YK E +D+RL+ N +
Sbjct: 271 FAWVFYEPVDAATMGLHDYHNIIKHPMDMKTIKKKLEAGQYKEPAEFESDIRLMINNCLT 330
Query: 180 YNDERSDVHVMAKTLLAKFEEKWLQLL 206
YN V+ F +KW +L+
Sbjct: 331 YNPVGDPVNSFGLRFQEVFNKKWSELV 357
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+L+ +HK WPF +PVD L + Y+E I +PMD TI+ ++++ Y + +E D
Sbjct: 50 VVLKEAAKHKHVWPFQKPVDAHTLCIPLYHERITRPMDLKTIESRLKSVYYTSAQECIDD 109
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTL 194
+ VF+N +N + DV +MA+ +
Sbjct: 110 IEQVFQNCYMFNGKEDDVTIMAQNV 134
>gi|395518502|ref|XP_003763399.1| PREDICTED: bromodomain and WD repeat-containing protein 1-like
[Sarcophilus harrisii]
Length = 2276
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF PVD+ + DY ++ID PMDF T+K+ +EA Y N E C D+RL+F NA Y
Sbjct: 1331 PFRHPVDL--VEYPDYRDIIDTPMDFGTVKETLEAGNYDNPLEFCKDIRLIFSNAKAYTP 1388
Query: 182 DERSDVHVMAKTLLAKFEEK 201
++RS ++ M L A FEEK
Sbjct: 1389 NKRSKIYSMTLRLSALFEEK 1408
>gi|395334140|gb|EJF66516.1| Bromodomain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 111 ILRNITQ---HKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREIC 167
IL+++ Q ++ A PF +PVD +G+ +Y +++ KPMD ST+K++++ +Y +
Sbjct: 457 ILKDLHQKQHYQIAHPFYEPVDPIKMGIPEYPKIVKKPMDLSTMKRKLDTGDYPTPEKFR 516
Query: 168 TDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 205
D RL+ KN M +N + VH K+L F+EKW L
Sbjct: 517 DDFRLMVKNCMTFNPPGNPVHEAGKSLQNLFDEKWKNL 554
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEA------------ 157
+ +R + + K A PF+ PVD LG+ Y +VI +PMDFSTI++++ A
Sbjct: 256 STVRTLKKMKDAGPFLNPVDPVALGIPHYPQVIKRPMDFSTIERKLAASNPAKPDPNPSN 315
Query: 158 KEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEK 214
Y + + DVRL+F N + +N V M K + A F+++ Q+ P EE K
Sbjct: 316 PRYHHAEQFVQDVRLIFTNCVTFNGPDHPVTQMGKRVEAVFDKQIKQMPP--PEEPK 370
>gi|432871630|ref|XP_004072008.1| PREDICTED: nucleosome-remodeling factor subunit BPTF-like [Oryzias
latipes]
Length = 2855
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
ILR++ HK AWPF++PVD DYY VI +PMDFST++ ++ + Y+ + E DV
Sbjct: 2747 ILRSLQSHKMAWPFLEPVDPHDA--PDYYRVIKEPMDFSTMETHLQKRHYQKLTEFVADV 2804
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 201
+F N YN + A+ L A F +K
Sbjct: 2805 TKIFDNCRYYNPNDTPFFQCAEVLEAFFVQK 2835
>gi|333360985|pdb|2L5E|A Chain A, Complex Between Bd1 Of Brd3 And Gata-1 C-Tail
Length = 128
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 110 TILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTD 169
+++ + +H++AWPF QPVD L L DY+++I PMD TIKK++E Y + E D
Sbjct: 26 VVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQD 85
Query: 170 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEE 213
+F N YN D+ +MA+ L E+ +LQ + ++ +EE
Sbjct: 86 FNTMFTNCYIYNKPTDDIVLMAQAL----EKIFLQKVAQMPQEE 125
>gi|432894173|ref|XP_004075941.1| PREDICTED: bromodomain and WD repeat-containing protein 1-like
[Oryzias latipes]
Length = 2184
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 123 PFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYN- 181
PF QPVD + DY+++ID PMDF+TI++ +E Y+N E+C D RL+F NA Y
Sbjct: 1351 PFRQPVDPQNY--PDYHDIIDTPMDFATIRRNLEEDGYENPVELCKDTRLIFANAKAYTP 1408
Query: 182 DERSDVHVMAKTLLAKFEEK 201
++RS ++ M L A FEE+
Sbjct: 1409 NKRSKIYSMTLRLSAFFEEQ 1428
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 121 AWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKY 180
A PF PVD+ + Y VI P D TI+ ++ + Y+ + + D R + NA +
Sbjct: 1201 AAPFSGPVDL--VQYPTYCTVIAYPTDLGTIRLRLMNRFYRRLSALIWDARYIAHNARTF 1258
Query: 181 NDERSDVHVMAKTL---LAKF 198
N+ RS + AK + L KF
Sbjct: 1259 NEPRSKIAHSAKIISNVLQKF 1279
>gi|384496605|gb|EIE87096.1| hypothetical protein RO3G_11807 [Rhizopus delemar RA 99-880]
Length = 1667
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 79 HVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDY 138
HVP+ + S+ +K + E +++ +L I +H A PF+QPVD G +Y
Sbjct: 1028 HVPA------QKSKHKKVVDSVTAEELKKCRRVLNKINKHGCALPFVQPVDEVLDGAPNY 1081
Query: 139 YEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKF 198
Y++I PMD S IK+++E KEY R+ D+RL+ N YN + V+ + L A F
Sbjct: 1082 YKIIKNPMDLSLIKRKVENKEYTTFRQFEDDIRLMLNNCYTYNGPGTYVYNEGQALEAVF 1141
Query: 199 EEKWLQLLPKVTEEEKRREEEEAEAQLDMQ-LAQDAA 234
E++ L K EE + E+ A + Q + DA
Sbjct: 1142 EKEIANLRGKEQEEPQNITIVESPAAVIPQTIVHDAP 1178
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 99 KRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAK 158
KRM + + ILR ++ A+ F++PVD G+ Y+ +I +PMD T++ ++
Sbjct: 1243 KRMTDYEKMETIILRAMSNPH-AFEFLRPVDPVKQGVPHYFTIIKEPMDLGTVETKLRNN 1301
Query: 159 EYKNVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
EY N E+ D+RLVF+N +N + V+ AK L + + W
Sbjct: 1302 EYTNPLEMNEDIRLVFRNCYTFNPPNTYVYNEAKMLEEDYNKDW 1345
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
I++ + H+ + F +PVD G+ YY+VI +PMD S I++ + ++KN+ E+ D+
Sbjct: 1421 IIKKLWAHQASAAFHKPVDAIAEGVPHYYDVIKRPMDLSVIQRNFDQDKFKNIWELERDI 1480
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKW 202
R +F N +N S V + L A F + W
Sbjct: 1481 RQIFWNCYSFNHHGSWVVKQCQALEAFFNQIW 1512
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 95 KAAEKRMEELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQ 154
K EKR+ + ++ N+T + A F +PVD+ L DY ++I KPMD TI ++
Sbjct: 1523 KGEEKRIAQ------KVINNLTYRECAALFNEPVDLSAL--PDYAQIIKKPMDLRTIWER 1574
Query: 155 MEAKEYKNVREICTDVRLVFKNAMKYN 181
+E+ +Y +++ I D+RLVFKN YN
Sbjct: 1575 LESGKYTSLKAIDQDIRLVFKNCFTYN 1601
>gi|396081966|gb|AFN83580.1| putative bromodomain-containing transcription factor
[Encephalitozoon romaleae SJ-2008]
Length = 370
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%)
Query: 102 EELIRQFGTILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYK 161
E ++ +L I ++ A PF++PVD LG+ DY E I PMD STI+K+++AKEY
Sbjct: 14 EHQLKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKNPMDLSTIRKKLDAKEYS 73
Query: 162 NVREICTDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRRE 217
D++L+F N YN + VH M K L + + + + +V+++ K+ E
Sbjct: 74 GPEGFDDDMKLMFNNCYTYNPPGTIVHDMGKALESAYNDMMAGMPQEVSKKRKKSE 129
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 116/258 (44%), Gaps = 25/258 (9%)
Query: 74 KEKERHVPSIRKQQQEASRREKAAEKRMEELIRQFGTILRNITQHK---WAWPFMQPVDV 130
K K+ +P + +Q R K E E +L ++ + K + WPF++PVD
Sbjct: 124 KRKKSEIPVTGRSKQ-VKRNAKPVEGMKAEDYEFCSEVLSDLVKPKHKSYNWPFLEPVD- 181
Query: 131 KGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDVRLVFKNAMKYNDERSDVHVM 190
G + YY VI +PMD T+K +++ ++Y +V E D+ L+ +N K+N ++V+
Sbjct: 182 -GDLVPGYYSVIKEPMDIQTMKNKLDQRKYHSVEEFGRDLELIVENCKKFNAPGTEVYAC 240
Query: 191 AKTLLAKFEEKWLQLLPKVTEEEKRREEEEAEAQLDMQLAQDAAHAKMARDTSNELYEVD 250
+ +FE+ + K + + + + E + ++ ++ + R ++L E
Sbjct: 241 GQ----EFEKAVKAHMEKTSPVDIKNKISELKRKV-------MSYTREIRMLESKLVE-- 287
Query: 251 VHLDELREMLVQKCRKTSTEEKRKLGAALTRLSPEDLGKALEIVAQSNTGFQATAEEVEL 310
+ R S E+ +G A+ ++ E +IV ++ G +E+E+
Sbjct: 288 ------QTGEAPSSRAYSLSERVSIGNAILNMTKEQTENVAKIVLKNGAGEFVENDEIEV 341
Query: 311 DMDAQSESTLWRLKFFVK 328
DM + + + ++K
Sbjct: 342 DMRTIPDHVVEEIDMYIK 359
>gi|443893835|dbj|GAC71291.1| histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5
[Pseudozyma antarctica T-34]
Length = 742
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 111 ILRNITQHKWAWPFMQPVDVKGLGLDDYYEVIDKPMDFSTIKKQMEAKEYKNVREICTDV 170
IL + H AWPF+ PV+ G + DYYEVI PMD ST++ ++E +Y NV E+ D
Sbjct: 645 ILVELNGHGSAWPFVNPVN--GDEVTDYYEVIKNPMDLSTMEAKLENNQYANVDELTADA 702
Query: 171 RLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKV 209
+L+F N YN S + + T L KF ++ LLPKV
Sbjct: 703 QLIFDNCRAYNPASSP-YAKSATKLEKFLKE--TLLPKV 738
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.125 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,441,895,345
Number of Sequences: 23463169
Number of extensions: 225793818
Number of successful extensions: 2559294
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10395
Number of HSP's successfully gapped in prelim test: 5637
Number of HSP's that attempted gapping in prelim test: 2126460
Number of HSP's gapped (non-prelim): 326299
length of query: 377
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 233
effective length of database: 8,980,499,031
effective search space: 2092456274223
effective search space used: 2092456274223
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)