Query 017094
Match_columns 377
No_of_seqs 217 out of 3245
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 08:50:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017094.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017094hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 1.2E-22 8.8E-27 181.4 11.9 255 70-350 51-310 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 1E-20 7.3E-25 168.8 11.5 247 95-371 51-302 (313)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.8 5.3E-19 3.8E-23 156.9 21.3 247 121-374 31-286 (305)
4 d2omza2 c.10.2.1 (A:33-416) In 99.8 4.3E-19 3.1E-23 162.3 21.3 271 70-370 45-383 (384)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.8 6.5E-19 4.8E-23 153.1 16.7 197 120-342 9-206 (266)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.8 3.4E-18 2.4E-22 151.6 19.0 243 68-342 30-283 (305)
7 d2omza2 c.10.2.1 (A:33-416) In 99.8 1.5E-17 1.1E-21 152.0 20.0 258 91-374 41-365 (384)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 1.5E-17 1.1E-21 145.8 15.3 202 121-342 32-236 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.7 2.2E-17 1.6E-21 143.3 12.8 175 121-319 31-207 (266)
10 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 5.3E-16 3.8E-20 131.1 15.8 189 118-340 38-226 (227)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 1.9E-16 1.4E-20 138.6 13.2 204 94-320 32-238 (284)
12 d2astb2 c.10.1.3 (B:2136-2419) 99.7 2.4E-16 1.7E-20 137.9 11.8 219 123-347 25-261 (284)
13 d2astb2 c.10.1.3 (B:2136-2419) 99.6 8.1E-17 5.9E-21 140.9 6.5 215 124-341 3-235 (284)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 6.1E-15 4.5E-19 122.8 13.5 146 164-340 64-209 (210)
15 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 8.1E-15 5.9E-19 122.1 13.5 166 119-316 44-209 (210)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.2E-14 8.9E-19 122.6 14.4 190 90-316 37-226 (227)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.6 2.1E-14 1.6E-18 118.5 14.5 53 280-336 147-199 (199)
18 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 1.9E-13 1.4E-17 122.5 21.1 60 281-349 282-341 (353)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.5 3.8E-14 2.8E-18 116.9 13.2 158 70-243 41-198 (199)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 3.9E-14 2.8E-18 120.6 12.9 197 121-341 29-235 (242)
21 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 3.3E-12 2.4E-16 114.2 20.5 264 70-374 39-338 (353)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.4 5.4E-13 3.9E-17 100.7 9.0 100 124-227 1-102 (124)
23 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 3.1E-13 2.3E-17 107.2 7.9 126 118-246 15-146 (162)
24 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 3.9E-12 2.8E-16 107.9 13.8 203 124-349 11-218 (242)
25 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.4 4.6E-13 3.4E-17 124.2 8.2 129 214-342 254-408 (460)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 1.7E-12 1.2E-16 102.8 6.9 129 89-224 13-148 (162)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.3 3.4E-12 2.5E-16 96.2 8.1 103 97-207 1-105 (124)
28 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.3 8.3E-13 6.1E-17 118.3 5.1 240 87-342 24-313 (344)
29 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 8E-12 5.8E-16 102.0 9.9 126 124-251 11-138 (192)
30 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 2.8E-13 2E-17 111.3 -1.0 128 115-246 42-181 (198)
31 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.2 1.4E-11 1.1E-15 110.1 9.9 237 69-319 31-314 (344)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 3.3E-13 2.4E-17 110.8 -1.9 156 60-223 14-182 (198)
33 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.2 2.9E-11 2.1E-15 98.6 8.5 107 121-228 29-139 (192)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.1 1.5E-12 1.1E-16 120.6 -0.6 301 70-373 3-410 (460)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.0 1.3E-09 9.6E-14 85.2 11.2 105 122-227 9-115 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 98.6 3.1E-08 2.3E-12 77.2 7.5 108 142-251 6-115 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 97.7 6.8E-06 4.9E-10 63.9 2.3 87 111-198 55-152 (162)
38 d1pgva_ c.10.1.1 (A:) Tropomod 97.7 3.4E-05 2.5E-09 60.1 6.2 45 90-134 11-57 (167)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.5 4.9E-05 3.6E-09 59.1 5.7 67 112-178 6-82 (167)
40 d1koha1 c.10.2.3 (A:201-362) m 97.5 8.6E-06 6.3E-10 63.3 0.5 87 87-174 58-152 (162)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.3 0.00016 1.2E-08 56.0 5.6 43 91-133 14-58 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.1 0.00041 3E-08 53.5 6.1 110 69-178 17-142 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.87 E-value=1.2e-22 Score=181.43 Aligned_cols=255 Identities=17% Similarity=0.194 Sum_probs=179.3
Q ss_pred CCcEEEEEecccccc-chhhhhcccCCceEEEeec-CCchhhHHHHHHHhhccCcccEEEeCCCccccC-CcCcCCCCcc
Q 017094 70 RVRHLSFAAANALRN-DFSSLLSYLGRLRTIFFST-DDEKTSQSFVESCFSKSQFLRVLNLRESALEVC-PRKMGNLKHM 146 (377)
Q Consensus 70 ~l~~L~l~~~~~~~~-~~~~~~~~~~~L~~L~l~~-~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l-~~~~~~l~~L 146 (377)
+++.|++.++..... .+|+.+.++++|++|++++ |.+. ..++..+.++++|++|+|++|.+..+ +..+..+.+|
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~---g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV---GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEE---SCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccc---cccccccccccccchhhhccccccccccccccchhhh
Confidence 677777777665542 4566777788888888775 4332 23455677777888888887777643 4446677777
Q ss_pred ceEeccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccc-cEeeecCcccccC-cccCCCCCCCCEEEccC
Q 017094 147 RYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVIL-RVFALTTKQKSLQ-ESGIRSLGSLRCLTISG 224 (377)
Q Consensus 147 ~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L-~~L~l~~~~~~~~-~~~l~~l~~L~~L~l~~ 224 (377)
+++++++|.....+|..+.++++|+++++++|.....+|..+..+..+ +.+++++|.++.. +..+..+. ...+++..
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~-~~~l~l~~ 206 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred cccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 888877776666777777777778888887776666677777776665 6677777776643 33444443 34577766
Q ss_pred CCCchhhHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhhhhcCCCCccEEeecCCCCCCCCCccCC
Q 017094 225 CRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHTLVIGDCPNFMALPGSLK 304 (377)
Q Consensus 225 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~ 304 (377)
+......+..++.+++++.++++++... ..+ ..+ ..+++|+.|++++|...+.+|++++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~l~~~~~~l~------------------~~~-~~~--~~~~~L~~L~Ls~N~l~g~iP~~l~ 265 (313)
T d1ogqa_ 207 NMLEGDASVLFGSDKNTQKIHLAKNSLA------------------FDL-GKV--GLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEEC------------------CBG-GGC--CCCTTCCEEECCSSCCEECCCGGGG
T ss_pred cccccccccccccccccccccccccccc------------------ccc-ccc--ccccccccccCccCeecccCChHHh
Confidence 6655556666666667777666665432 133 334 6778999999999887668999999
Q ss_pred CCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCCCccccCCC
Q 017094 305 DLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCPALSERCKP 350 (377)
Q Consensus 305 ~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~~l~~~~~~ 350 (377)
.+++|++|+|++|.....+|. +.++++|+.+++.+|+.+...|.+
T Consensus 266 ~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 266 QLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred CCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCC
Confidence 999999999999966557885 578899999999999887776544
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.83 E-value=1e-20 Score=168.79 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=161.1
Q ss_pred CceEEEeecCCchhhHHHHHHHhhccCcccEEEeCC-Cccc-cCCcCcCCCCccceEeccCCCcccccChhhcCCCcccE
Q 017094 95 RLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRE-SALE-VCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQT 172 (377)
Q Consensus 95 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~-~~~~-~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~ 172 (377)
+++.|+++++.... ...++..+.++++|++|+|++ |.+. .+|..++++++|++|++++|......+..+..+.+|++
T Consensus 51 ~v~~L~L~~~~l~g-~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPK-PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSS-CEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCC-CCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 56777777664421 112345567777777777765 4554 56777777777777777766444445555666777777
Q ss_pred EeccCccccccCchhhcccccccEeeecCcccc-cCcccCCCCCCC-CEEEccCCCCchhhHHhcccCcccchhccccCC
Q 017094 173 LDLEGCLELEELPKDIRYLVILRVFALTTKQKS-LQESGIRSLGSL-RCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYD 250 (377)
Q Consensus 173 L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~~~-~~~~~l~~l~~L-~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 250 (377)
+++++|.....+|..+.++++|+.+++++|.+. ..|..+..+..+ +.+.+++|+.....+..++.+.
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~----------- 198 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN----------- 198 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-----------
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-----------
Confidence 777776666666777777777777777777665 344555555554 5666666554443333333332
Q ss_pred CCccCCCccceEEecccccccccchhhhhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCC
Q 017094 251 DRKNTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHL 330 (377)
Q Consensus 251 ~~~~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l 330 (377)
...+++..+.....+|... ..+++++.++++++..... +..+..+++|+.|++++|.....+|..+.++
T Consensus 199 --------~~~l~l~~~~~~~~~~~~~--~~~~~l~~l~~~~~~l~~~-~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L 267 (313)
T d1ogqa_ 199 --------LAFVDLSRNMLEGDASVLF--GSDKNTQKIHLAKNSLAFD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQL 267 (313)
T ss_dssp --------CSEEECCSSEEEECCGGGC--CTTSCCSEEECCSSEECCB-GGGCCCCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred --------ccccccccccccccccccc--ccccccccccccccccccc-ccccccccccccccCccCeecccCChHHhCC
Confidence 2233344444444666666 7889999999998765444 4468889999999999997666899999999
Q ss_pred CCcCeeeccCCCCcc-ccCCCCCCCCCCCCCccceEEeCCCc
Q 017094 331 TTLKLLAIGGCPALS-ERCKPPTGEDWPKIAHITQIELDDEI 371 (377)
Q Consensus 331 ~~L~~L~l~~c~~l~-~~~~~~~~~~~~~i~~~~~~~~~~~~ 371 (377)
++|++|++++|. ++ .+|. +..+.++..+.+.++.
T Consensus 268 ~~L~~L~Ls~N~-l~g~iP~------~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 268 KFLHSLNVSFNN-LCGEIPQ------GGNLQRFDVSAYANNK 302 (313)
T ss_dssp TTCCEEECCSSE-EEEECCC------STTGGGSCGGGTCSSS
T ss_pred CCCCEEECcCCc-ccccCCC------cccCCCCCHHHhCCCc
Confidence 999999999985 44 3332 2345666666655554
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.82 E-value=5.3e-19 Score=156.87 Aligned_cols=247 Identities=16% Similarity=0.122 Sum_probs=147.1
Q ss_pred CcccEEEeCCCccccCCc-CcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccccEeee
Q 017094 121 QFLRVLNLRESALEVCPR-KMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFAL 199 (377)
Q Consensus 121 ~~L~~L~L~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l 199 (377)
+++++|+|++|.++.+|+ .+..+++|++|++++|......|.++..+++|++|++++| .+..+|.. ....++.|..
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n-~l~~l~~~--~~~~l~~L~~ 107 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN-QLKELPEK--MPKTLQELRV 107 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS-CCSBCCSS--CCTTCCEEEC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC-ccCcCccc--hhhhhhhhhc
Confidence 456666666666666654 4666666666666665433333455666666666666665 44555543 2345666666
Q ss_pred cCcccccCc-ccCCCCCCCCEEEccCCCCch--hhHHhcccCcccchhccccCCCCc---cCCCccceEEeccccccccc
Q 017094 200 TTKQKSLQE-SGIRSLGSLRCLTISGCRDLE--HLFEEIEQLSLLRTLLIHSYDDRK---NTRPRLRRVFIKEITQLLEL 273 (377)
Q Consensus 200 ~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~--~~~~~l~~l~~L~~L~l~~~~~~~---~~~~~L~~L~l~~~~~~~~l 273 (377)
..+.+...+ ..+.....+..+....+.... .....+..+++|+.+++++|.... ..+++|++|++.++......
T Consensus 108 ~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n~~~~~~ 187 (305)
T d1xkua_ 108 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 187 (305)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred cccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCCcCCCCC
Confidence 666555432 234445555666655543221 122344556666666666665433 23456777777776555555
Q ss_pred chhhhhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCCCccccCCCC--
Q 017094 274 PQWLLQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCPALSERCKPP-- 351 (377)
Q Consensus 274 ~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~~l~~~~~~~-- 351 (377)
+..+ ..++.++.|++++|......+.++.++++|++|++++| .++.+|..+..+++|++|++++|. ++.+....
T Consensus 188 ~~~~--~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N-~L~~lp~~l~~l~~L~~L~Ls~N~-i~~i~~~~f~ 263 (305)
T d1xkua_ 188 AASL--KGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN-KLVKVPGGLADHKYIQVVYLHNNN-ISAIGSNDFC 263 (305)
T ss_dssp TGGG--TTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSS-CCSSCCTTTTTCSSCCEEECCSSC-CCCCCTTSSS
T ss_pred hhHh--hccccccccccccccccccccccccccccceeeecccc-cccccccccccccCCCEEECCCCc-cCccChhhcc
Confidence 5555 66677888888777544444556677788888888877 566777777778888888888873 55543211
Q ss_pred CCCCCCCCCccceEEeCCCccCC
Q 017094 352 TGEDWPKIAHITQIELDDEIIKS 374 (377)
Q Consensus 352 ~~~~~~~i~~~~~~~~~~~~~~~ 374 (377)
.-.......++..+.+.+++++.
T Consensus 264 ~~~~~~~~~~L~~L~L~~N~~~~ 286 (305)
T d1xkua_ 264 PPGYNTKKASYSGVSLFSNPVQY 286 (305)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCG
T ss_pred CcchhcccCCCCEEECCCCcCcc
Confidence 01112234567777777777654
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.82 E-value=4.3e-19 Score=162.34 Aligned_cols=271 Identities=19% Similarity=0.232 Sum_probs=182.2
Q ss_pred CCcEEEEEeccccccchhhhhcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccceE
Q 017094 70 RVRHLSFAAANALRNDFSSLLSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYL 149 (377)
Q Consensus 70 ~l~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L 149 (377)
++++|.+.++.+...+ .+..+++|++|++++|...... .++.+++|++|++++|.+..++ .++.+++|+.|
T Consensus 45 ~l~~L~l~~~~I~~l~---gl~~L~nL~~L~Ls~N~l~~l~-----~l~~L~~L~~L~L~~n~i~~i~-~l~~l~~L~~L 115 (384)
T d2omza2 45 QVTTLQADRLGIKSID---GVEYLNNLTQINFSNNQLTDIT-----PLKNLTKLVDILMNNNQIADIT-PLANLTNLTGL 115 (384)
T ss_dssp TCCEEECCSSCCCCCT---TGGGCTTCCEEECCSSCCCCCG-----GGTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEE
T ss_pred CCCEEECCCCCCCCcc---ccccCCCCCEEeCcCCcCCCCc-----cccCCccccccccccccccccc-ccccccccccc
Confidence 7899999988877643 5778899999999998765321 2888999999999999988775 47889999999
Q ss_pred eccCCCcccccC----------------------------------------------------------------hhhc
Q 017094 150 DLSRNSKIKKLP----------------------------------------------------------------KSIC 165 (377)
Q Consensus 150 ~l~~~~~~~~l~----------------------------------------------------------------~~~~ 165 (377)
+++++. ...++ ....
T Consensus 116 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (384)
T d2omza2 116 TLFNNQ-ITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 194 (384)
T ss_dssp ECCSSC-CCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGG
T ss_pred cccccc-ccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccc
Confidence 987543 22111 1223
Q ss_pred CCCcccEEeccCccccccCchhhcccccccEeeecCcccccCcccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhc
Q 017094 166 ELQSLQTLDLEGCLELEELPKDIRYLVILRVFALTTKQKSLQESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLL 245 (377)
Q Consensus 166 ~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~ 245 (377)
.+++++.+++++| .+..++. ...+++|+.|++++|.++.. +.+..+++|+.+++++|.... ++ .++.+++|+.|+
T Consensus 195 ~l~~~~~l~l~~n-~i~~~~~-~~~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~-~~-~~~~~~~L~~L~ 269 (384)
T d2omza2 195 KLTNLESLIATNN-QISDITP-LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISN-LA-PLSGLTKLTELK 269 (384)
T ss_dssp GCTTCSEEECCSS-CCCCCGG-GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccccceeeccCC-ccCCCCc-ccccCCCCEEECCCCCCCCc-chhhcccccchhccccCccCC-CC-cccccccCCEee
Confidence 3455666666654 3333322 45566677777777766654 356666777777777765433 22 355667777777
Q ss_pred cccCCCCc----cCCCccceEEecccccccccchhhhhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCC
Q 017094 246 IHSYDDRK----NTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLS 321 (377)
Q Consensus 246 l~~~~~~~----~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~ 321 (377)
++++.... ...+.++.+.+..+. +..++. + ..+++++.|++++|. +..++ .+..+++|++|++++| .++
T Consensus 270 l~~~~l~~~~~~~~~~~l~~l~~~~n~-l~~~~~-~--~~~~~l~~L~ls~n~-l~~l~-~l~~l~~L~~L~L~~n-~l~ 342 (384)
T d2omza2 270 LGANQISNISPLAGLTALTNLELNENQ-LEDISP-I--SNLKNLTYLTLYFNN-ISDIS-PVSSLTKLQRLFFANN-KVS 342 (384)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEECCSSC-CSCCGG-G--GGCTTCSEEECCSSC-CSCCG-GGGGCTTCCEEECCSS-CCC
T ss_pred ccCcccCCCCccccccccccccccccc-cccccc-c--chhcccCeEECCCCC-CCCCc-ccccCCCCCEEECCCC-CCC
Confidence 76665443 223456666665543 223332 3 677889999999875 45554 3778999999999998 566
Q ss_pred CCCcCCCCCCCcCeeeccCCCCccccCCCCCCCCCCCCCccceEEeCCC
Q 017094 322 SLPEDMHHLTTLKLLAIGGCPALSERCKPPTGEDWPKIAHITQIELDDE 370 (377)
Q Consensus 322 ~~~~~l~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~i~~~~~~~~~~~ 370 (377)
.++ .+..+++|++|++++|. +++.+. +..+.+++.+.+.++
T Consensus 343 ~l~-~l~~l~~L~~L~l~~N~-l~~l~~------l~~l~~L~~L~L~~N 383 (384)
T d2omza2 343 DVS-SLANLTNINWLSAGHNQ-ISDLTP------LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCG-GGGGCTTCCEEECCSSC-CCBCGG------GTTCTTCSEEECCCE
T ss_pred CCh-hHcCCCCCCEEECCCCc-CCCChh------hccCCCCCEeeCCCC
Confidence 666 47889999999999884 555431 335677888877654
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=6.5e-19 Score=153.08 Aligned_cols=197 Identities=23% Similarity=0.248 Sum_probs=134.4
Q ss_pred cCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccC-hhhcCCCcccEEeccCccccccCchhhcccccccEee
Q 017094 120 SQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLP-KSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFA 198 (377)
Q Consensus 120 ~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~-~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~ 198 (377)
...+..++.+++.++.+|+.+. +++++|++++| .+..+| .++..+++|++|++++| .+..+|. +..+++|+.|+
T Consensus 9 ~~~~~~v~C~~~~L~~iP~~lp--~~l~~L~Ls~N-~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~-~~~l~~L~~L~ 83 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLTALPPDLP--KDTTILHLSEN-LLYTFSLATLMPYTRLTQLNLDRA-ELTKLQV-DGTLPVLGTLD 83 (266)
T ss_dssp STTCCEEECTTSCCSSCCSCCC--TTCCEEECTTS-CCSEEEGGGGTTCTTCCEEECTTS-CCCEEEC-CSCCTTCCEEE
T ss_pred cCCCeEEEccCCCCCeeCcCcC--cCCCEEECcCC-cCCCcCHHHhhccccccccccccc-ccccccc-ccccccccccc
Confidence 3445556777777777776553 56788888865 455554 45677888888888876 4555553 46777888888
Q ss_pred ecCcccccCcccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhhh
Q 017094 199 LTTKQKSLQESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWLL 278 (377)
Q Consensus 199 l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~ 278 (377)
+++|.+...+..+..+++|+.|+++++......+..+..+.+++.|.+++|... .++...+
T Consensus 84 Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~-------------------~l~~~~~ 144 (266)
T d1p9ag_ 84 LSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-------------------TLPPGLL 144 (266)
T ss_dssp CCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-------------------CCCTTTT
T ss_pred cccccccccccccccccccccccccccccceeeccccccccccccccccccccc-------------------eeccccc
Confidence 888877776667777888888888777654433444556666666666665432 3333222
Q ss_pred hcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCC
Q 017094 279 QCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCP 342 (377)
Q Consensus 279 ~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~ 342 (377)
..+++|+.+++++|......++.+..+++|++|+|++|. ++.+|..+..+++|+.|++.++|
T Consensus 145 -~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 145 -TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS-LYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp -TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCCCSEEECCSCC
T ss_pred -cccccchhcccccccccccCccccccccccceeecccCC-CcccChhHCCCCCCCEEEecCCC
Confidence 456778888888876443344557778888888888874 66788777788888888888776
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.78 E-value=3.4e-18 Score=151.60 Aligned_cols=243 Identities=16% Similarity=0.167 Sum_probs=147.6
Q ss_pred CCCCcEEEEEeccccccchhhhhcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccc
Q 017094 68 PKRVRHLSFAAANALRNDFSSLLSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMR 147 (377)
Q Consensus 68 ~~~l~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~ 147 (377)
++.+++|.+.++.+.... +..|..+++|++|+++++.... ..+..+..+++|++|++++|.++.+|..+ ...+.
T Consensus 30 ~~~l~~L~Ls~N~i~~l~-~~~f~~l~~L~~L~l~~n~~~~---i~~~~f~~l~~L~~L~l~~n~l~~l~~~~--~~~l~ 103 (305)
T d1xkua_ 30 PPDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISK---ISPGAFAPLVKLERLYLSKNQLKELPEKM--PKTLQ 103 (305)
T ss_dssp CTTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSCCCC---BCTTTTTTCTTCCEEECCSSCCSBCCSSC--CTTCC
T ss_pred CCCCCEEECcCCcCCCcC-hhHhhccccccccccccccccc---cchhhhhCCCccCEecccCCccCcCccch--hhhhh
Confidence 456666666666555432 2245666666666666654321 12234556666666666666666665432 24566
Q ss_pred eEeccCCCcccccCh-hhcCCCcccEEeccCccc--cccCchhhcccccccEeeecCcccccCcccCCCCCCCCEEEccC
Q 017094 148 YLDLSRNSKIKKLPK-SICELQSLQTLDLEGCLE--LEELPKDIRYLVILRVFALTTKQKSLQESGIRSLGSLRCLTISG 224 (377)
Q Consensus 148 ~L~l~~~~~~~~l~~-~~~~l~~L~~L~l~~~~~--~~~~p~~l~~l~~L~~L~l~~~~~~~~~~~l~~l~~L~~L~l~~ 224 (377)
.|.+..+ .+..++. .+.....+..++...+.. ....+..+..+++|+.+++++|.+...+.. .+++|+.|++.+
T Consensus 104 ~L~~~~n-~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~--~~~~L~~L~l~~ 180 (305)
T d1xkua_ 104 ELRVHEN-EITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG--LPPSLTELHLDG 180 (305)
T ss_dssp EEECCSS-CCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSS--CCTTCSEEECTT
T ss_pred hhhcccc-chhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcc--cCCccCEEECCC
Confidence 6666644 3333332 233445555555554321 122234455666666777766666554322 245666777766
Q ss_pred CCCchhhHHhcccCcccchhccccCCCCccCCCccceEEeccccccccc-chhhhhcCCCCccEEeecCCCCCCCCCccC
Q 017094 225 CRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLEL-PQWLLQCCTDTLHTLVIGDCPNFMALPGSL 303 (377)
Q Consensus 225 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l-~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~ 303 (377)
|......+..+..++.++.|++++|.. ..+ +.++ ..+++|++|++++|. +..+|.++
T Consensus 181 n~~~~~~~~~~~~~~~l~~L~~s~n~l-------------------~~~~~~~~--~~l~~L~~L~L~~N~-L~~lp~~l 238 (305)
T d1xkua_ 181 NKITKVDAASLKGLNNLAKLGLSFNSI-------------------SAVDNGSL--ANTPHLRELHLNNNK-LVKVPGGL 238 (305)
T ss_dssp SCCCEECTGGGTTCTTCCEEECCSSCC-------------------CEECTTTG--GGSTTCCEEECCSSC-CSSCCTTT
T ss_pred CcCCCCChhHhhccccccccccccccc-------------------cccccccc--cccccceeeeccccc-cccccccc
Confidence 665554455555666666666655432 233 3344 678999999999984 77889899
Q ss_pred CCCccCceecccCcccCCCCCc-------CCCCCCCcCeeeccCCC
Q 017094 304 KDLEALETLAIRGCPKLSSLPE-------DMHHLTTLKLLAIGGCP 342 (377)
Q Consensus 304 ~~l~~L~~L~l~~~~~~~~~~~-------~l~~l~~L~~L~l~~c~ 342 (377)
..+++|++|++++| .++.++. .....++|+.|++.++|
T Consensus 239 ~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 239 ADHKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp TTCSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ccccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 99999999999998 4666543 23457889999999998
No 7
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.76 E-value=1.5e-17 Score=151.96 Aligned_cols=258 Identities=16% Similarity=0.172 Sum_probs=181.5
Q ss_pred cccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCcc
Q 017094 91 SYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSL 170 (377)
Q Consensus 91 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L 170 (377)
..+.+|++|+++++..... ..+..+++|++|++++|.++.+++ ++.+++|++|++++| .+..+++ ++++++|
T Consensus 41 ~~l~~l~~L~l~~~~I~~l-----~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n-~i~~i~~-l~~l~~L 112 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKSI-----DGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNN-QIADITP-LANLTNL 112 (384)
T ss_dssp HHHTTCCEEECCSSCCCCC-----TTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCCCGG-GTTCTTC
T ss_pred HHhCCCCEEECCCCCCCCc-----cccccCCCCCEEeCcCCcCCCCcc-ccCCccccccccccc-ccccccc-ccccccc
Confidence 4567899999998865422 237789999999999999998874 899999999999987 5666654 8899999
Q ss_pred cEEeccCcccccc---------------------------------------------------------------Cchh
Q 017094 171 QTLDLEGCLELEE---------------------------------------------------------------LPKD 187 (377)
Q Consensus 171 ~~L~l~~~~~~~~---------------------------------------------------------------~p~~ 187 (377)
+.|++.++..... .+..
T Consensus 113 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (384)
T d2omza2 113 TGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV 192 (384)
T ss_dssp CEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccc
Confidence 9999876532110 0012
Q ss_pred hcccccccEeeecCcccccCcccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCCCc----cCCCccceEE
Q 017094 188 IRYLVILRVFALTTKQKSLQESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDDRK----NTRPRLRRVF 263 (377)
Q Consensus 188 l~~l~~L~~L~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~----~~~~~L~~L~ 263 (377)
...+++++.++++++.+...+ ....+++|+.|++.+|.... + ..+..+++|+.|++++|.... ...++|++|+
T Consensus 193 ~~~l~~~~~l~l~~n~i~~~~-~~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~ 269 (384)
T d2omza2 193 LAKLTNLESLIATNNQISDIT-PLGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 269 (384)
T ss_dssp GGGCTTCSEEECCSSCCCCCG-GGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEE
T ss_pred cccccccceeeccCCccCCCC-cccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCcccccccCCEee
Confidence 344566777777777666553 34556778888887775432 2 346677778888887776544 3345778888
Q ss_pred ecccccccccchhhhhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCCC
Q 017094 264 IKEITQLLELPQWLLQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCPA 343 (377)
Q Consensus 264 l~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~~ 343 (377)
++++. +..++. + ..++.++.+.+..|. +..++ .+..+++++.|++++| .+++++. +..+++|++|++++| .
T Consensus 270 l~~~~-l~~~~~-~--~~~~~l~~l~~~~n~-l~~~~-~~~~~~~l~~L~ls~n-~l~~l~~-l~~l~~L~~L~L~~n-~ 340 (384)
T d2omza2 270 LGANQ-ISNISP-L--AGLTALTNLELNENQ-LEDIS-PISNLKNLTYLTLYFN-NISDISP-VSSLTKLQRLFFANN-K 340 (384)
T ss_dssp CCSSC-CCCCGG-G--TTCTTCSEEECCSSC-CSCCG-GGGGCTTCSEEECCSS-CCSCCGG-GGGCTTCCEEECCSS-C
T ss_pred ccCcc-cCCCCc-c--ccccccccccccccc-ccccc-ccchhcccCeEECCCC-CCCCCcc-cccCCCCCEEECCCC-C
Confidence 77653 234433 2 566777888777654 33333 4678899999999998 5566654 788999999999999 5
Q ss_pred ccccCCCCCCCCCCCCCccceEEeCCCccCC
Q 017094 344 LSERCKPPTGEDWPKIAHITQIELDDEIIKS 374 (377)
Q Consensus 344 l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 374 (377)
+++.. .+..+.+++.+.+.++.+++
T Consensus 341 l~~l~------~l~~l~~L~~L~l~~N~l~~ 365 (384)
T d2omza2 341 VSDVS------SLANLTNINWLSAGHNQISD 365 (384)
T ss_dssp CCCCG------GGGGCTTCCEEECCSSCCCB
T ss_pred CCCCh------hHcCCCCCCEEECCCCcCCC
Confidence 66542 14456788888888887763
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.5e-17 Score=145.82 Aligned_cols=202 Identities=18% Similarity=0.183 Sum_probs=126.5
Q ss_pred CcccEEEeCCCccccCCc-CcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccC-chhhcccccccEee
Q 017094 121 QFLRVLNLRESALEVCPR-KMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEEL-PKDIRYLVILRVFA 198 (377)
Q Consensus 121 ~~L~~L~L~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~-p~~l~~l~~L~~L~ 198 (377)
+.+++|+|++|.++.+|. .+.++++|++|+++++......+..+..+..++.+....+..+..+ +..+.++++|+.|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 456777777777776654 4677777777777755332233334455667777766555455554 44567777777777
Q ss_pred ecCcccccCc-ccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhh
Q 017094 199 LTTKQKSLQE-SGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWL 277 (377)
Q Consensus 199 l~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~ 277 (377)
+++|.+...+ ..+...++|+.+++.+|+.....+..+..+++|+.|++++|... .++...
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~-------------------~l~~~~ 172 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-------------------SVPERA 172 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------EECTTT
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCccc-------------------ccchhh
Confidence 7777765443 45566777777777776643322344555666666666665422 333222
Q ss_pred hhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCC
Q 017094 278 LQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCP 342 (377)
Q Consensus 278 ~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~ 342 (377)
+ ..+++|+.+++++|......|.++..+++|++|++++|...+..+..+..+++|+.|+++++|
T Consensus 173 f-~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 173 F-RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp T-TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred h-ccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCC
Confidence 2 456777777777776555556777777777777777775544444556677777777777764
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2.2e-17 Score=143.28 Aligned_cols=175 Identities=23% Similarity=0.261 Sum_probs=114.8
Q ss_pred CcccEEEeCCCccccCC-cCcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccccEeee
Q 017094 121 QFLRVLNLRESALEVCP-RKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFAL 199 (377)
Q Consensus 121 ~~L~~L~L~~~~~~~l~-~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l 199 (377)
+++++|+|++|.+..+| ..+..+++|++|++++| .++.+|. ++.+++|++|++++| .+...+..+..+++|+.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~-~~~l~~L~~L~Ls~N-~l~~~~~~~~~l~~L~~L~l 107 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA-ELTKLQV-DGTLPVLGTLDLSHN-QLQSLPLLGQTLPALTVLDV 107 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTS-CCCEEEC-CSCCTTCCEEECCSS-CCSSCCCCTTTCTTCCEEEC
T ss_pred cCCCEEECcCCcCCCcCHHHhhccccccccccccc-ccccccc-ccccccccccccccc-cccccccccccccccccccc
Confidence 46777777777777665 35677777777777765 5556554 456777777777776 45555666777777777777
Q ss_pred cCcccccCc-ccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhhh
Q 017094 200 TTKQKSLQE-SGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWLL 278 (377)
Q Consensus 200 ~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~ 278 (377)
+++.+...+ ..+..+.+++.|.+.+|......+..+..+++|+.+++++|... .++...+
T Consensus 108 ~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~-------------------~~~~~~~ 168 (266)
T d1p9ag_ 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-------------------ELPAGLL 168 (266)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-------------------CCCTTTT
T ss_pred cccccceeeccccccccccccccccccccceeccccccccccchhccccccccc-------------------ccCcccc
Confidence 777666543 45566777777777776543322333455666777766665432 3332221
Q ss_pred hcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCccc
Q 017094 279 QCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPK 319 (377)
Q Consensus 279 ~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~ 319 (377)
..+++|++|++++|. +..+|+.+..+++|+.|+|++|+.
T Consensus 169 -~~l~~L~~L~Ls~N~-L~~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 169 -NGLENLDTLLLQENS-LYTIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp -TTCTTCCEEECCSSC-CCCCCTTTTTTCCCSEEECCSCCB
T ss_pred -ccccccceeecccCC-CcccChhHCCCCCCCEEEecCCCC
Confidence 566778888888765 557777777788888888887753
No 10
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=5.3e-16 Score=131.14 Aligned_cols=189 Identities=19% Similarity=0.245 Sum_probs=127.8
Q ss_pred hccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccccEe
Q 017094 118 SKSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVF 197 (377)
Q Consensus 118 ~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L 197 (377)
..+.+|+.|++.+|.++.+ +.+..+++|++|++++| .+..+++ +..+++|+++++++| ....++ .+..+++|+.+
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~~l~~l~~L~~L~ls~n-~i~~~~~-l~~l~~l~~l~~~~n-~~~~i~-~l~~l~~L~~l 112 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDN-QITDLAP-LKNLTKITELELSGN-PLKNVS-AIAGLQSIKTL 112 (227)
T ss_dssp HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSS-CCCCCGG-GTTCCSCCEEECCSC-CCSCCG-GGTTCTTCCEE
T ss_pred HHcCCcCEEECCCCCCCcc-hhHhcCCCCcEeecCCc-eeecccc-ccccccccccccccc-cccccc-ccccccccccc
Confidence 4456778888888877776 35777888888888765 4444443 677788888888775 344453 46677778888
Q ss_pred eecCcccccCcccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhh
Q 017094 198 ALTTKQKSLQESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWL 277 (377)
Q Consensus 198 ~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~ 277 (377)
.++++..... ..+...+.++.+.+.++..... ..+..+++|+.|.+++|... ..+. +
T Consensus 113 ~l~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~-------------------~~~~-l 169 (227)
T d1h6ua2 113 DLTSTQITDV-TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVS-------------------DLTP-L 169 (227)
T ss_dssp ECTTSCCCCC-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCC-------------------CCGG-G
T ss_pred cccccccccc-chhccccchhhhhchhhhhchh--hhhccccccccccccccccc-------------------cchh-h
Confidence 8877766554 3566677777777776654332 22455666666666655432 2222 2
Q ss_pred hhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccC
Q 017094 278 LQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGG 340 (377)
Q Consensus 278 ~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~ 340 (377)
..+++|++|++++|. +..++. +.++++|++|++++| .+++++. +.++++|+.|++++
T Consensus 170 --~~l~~L~~L~Ls~n~-l~~l~~-l~~l~~L~~L~Ls~N-~lt~i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 170 --ANLSKLTTLKADDNK-ISDISP-LASLPNLIEVHLKNN-QISDVSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp --TTCTTCCEEECCSSC-CCCCGG-GGGCTTCCEEECTTS-CCCBCGG-GTTCTTCCEEEEEE
T ss_pred --cccccceecccCCCc-cCCChh-hcCCCCCCEEECcCC-cCCCCcc-cccCCCCCEEEeeC
Confidence 567888889888874 556653 678888999999888 5676764 67888888888763
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.9e-16 Score=138.58 Aligned_cols=204 Identities=24% Similarity=0.246 Sum_probs=145.2
Q ss_pred CCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCC-cCcCCCCccceEeccCCCccccc-ChhhcCCCccc
Q 017094 94 GRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCP-RKMGNLKHMRYLDLSRNSKIKKL-PKSICELQSLQ 171 (377)
Q Consensus 94 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~-~~~~~l~~L~~L~l~~~~~~~~l-~~~~~~l~~L~ 171 (377)
+.++.|++++|.+.. ..+..+..+++|++|+++++.+..++ ..+..+..++.+....+..+..+ +..+..+++|+
T Consensus 32 ~~~~~L~Ls~N~i~~---i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~ 108 (284)
T d1ozna_ 32 AASQRIFLHGNRISH---VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLH 108 (284)
T ss_dssp TTCSEEECTTSCCCE---ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCC
T ss_pred CCCCEEECcCCcCCC---CCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCC
Confidence 567888888876542 22345778888999999888887554 34566788888877655566655 45577888899
Q ss_pred EEeccCccccccCchhhcccccccEeeecCcccccCc-ccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCC
Q 017094 172 TLDLEGCLELEELPKDIRYLVILRVFALTTKQKSLQE-SGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYD 250 (377)
Q Consensus 172 ~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 250 (377)
+|++++|......+..+..+.+|+.+++++|.++.++ ..+..+++|+.|++++|....-.+..+..+++|+.+.+++|.
T Consensus 109 ~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~ 188 (284)
T d1ozna_ 109 TLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR 188 (284)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhcc
Confidence 9999887543444556677888899999988888764 456778889999998887544334556777888888887765
Q ss_pred CCccCCCccceEEecccccccccchhhhhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccC
Q 017094 251 DRKNTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKL 320 (377)
Q Consensus 251 ~~~~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~ 320 (377)
... -.|.++ ..+++|++|++++|......+.++..+++|++|++++|+..
T Consensus 189 l~~------------------i~~~~f--~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 189 VAH------------------VHPHAF--RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CCE------------------ECTTTT--TTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccc------------------cChhHh--hhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 432 234444 66778888888887655555566778888888888877543
No 12
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=2.4e-16 Score=137.87 Aligned_cols=219 Identities=18% Similarity=0.175 Sum_probs=109.1
Q ss_pred ccEEEeCCCccccCCcCcCCCCccceEeccCCCccc-ccChhhcCCCcccEEeccCccccccCchhhcccccccEeeecC
Q 017094 123 LRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIK-KLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFALTT 201 (377)
Q Consensus 123 L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~-~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~ 201 (377)
...+.+................+|++|++++|.... .++..+..+++|++|++++|......+..+..+++|++|++++
T Consensus 25 ~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~ 104 (284)
T d2astb2 25 VIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 104 (284)
T ss_dssp CSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred ceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccc
Confidence 344455444433322233344567777776553221 2334455666777777776643334445566666677777766
Q ss_pred cc-cccC--cccCCCCCCCCEEEccCCCCch--hhHHhccc-CcccchhccccCCC-Cc--------cCCCccceEEecc
Q 017094 202 KQ-KSLQ--ESGIRSLGSLRCLTISGCRDLE--HLFEEIEQ-LSLLRTLLIHSYDD-RK--------NTRPRLRRVFIKE 266 (377)
Q Consensus 202 ~~-~~~~--~~~l~~l~~L~~L~l~~~~~~~--~~~~~l~~-l~~L~~L~l~~~~~-~~--------~~~~~L~~L~l~~ 266 (377)
|. ++.. ......+++|++|++++|.... .+...+.. ++.|+.|+++++.. .+ ..+++|++|++++
T Consensus 105 c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~ 184 (284)
T d2astb2 105 CSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD 184 (284)
T ss_dssp CBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTT
T ss_pred cccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccccc
Confidence 42 3211 1122346667777776664332 12222222 34566666655421 11 2234555555555
Q ss_pred cccccc-cchhhhhcCCCCccEEeecCCCCCCC-CCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCCCc
Q 017094 267 ITQLLE-LPQWLLQCCTDTLHTLVIGDCPNFMA-LPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCPAL 344 (377)
Q Consensus 267 ~~~~~~-l~~~~~~~~~~~L~~L~l~~~~~~~~-l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~~l 344 (377)
|..+++ ....+ ..+++|++|++++|..+.. ....+..+++|+.|++++|-.-..+......+|+|+. +|..+
T Consensus 185 ~~~itd~~~~~l--~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~i----~~~~l 258 (284)
T d2astb2 185 SVMLKNDCFQEF--FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQI----NCSHF 258 (284)
T ss_dssp CTTCCGGGGGGG--GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSEE----SCCCS
T ss_pred ccCCCchhhhhh--cccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCccccc----cCccC
Confidence 554432 22333 4567777777777654432 2233556777777777776222222222234555542 45555
Q ss_pred ccc
Q 017094 345 SER 347 (377)
Q Consensus 345 ~~~ 347 (377)
+..
T Consensus 259 s~~ 261 (284)
T d2astb2 259 TTI 261 (284)
T ss_dssp CCT
T ss_pred CCC
Confidence 544
No 13
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=8.1e-17 Score=140.91 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=148.4
Q ss_pred cEEEeCCCccccCCcCcCCC--CccceEeccCCCcccccChhhcCCCcccEEeccCcccccc-CchhhcccccccEeeec
Q 017094 124 RVLNLRESALEVCPRKMGNL--KHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEE-LPKDIRYLVILRVFALT 200 (377)
Q Consensus 124 ~~L~L~~~~~~~l~~~~~~l--~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~-~p~~l~~l~~L~~L~l~ 200 (377)
+.+|++++.+. |..+..+ .....+.++.. .............+|++|++++|..... ++..+..+++|++|+++
T Consensus 3 ~~lDLs~~~l~--~~~l~~l~~~~~~~lrl~~~-~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~ 79 (284)
T d2astb2 3 QTLDLTGKNLH--PDVTGRLLSQGVIAFRCPRS-FMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLE 79 (284)
T ss_dssp SEEECTTCBCC--HHHHHHHHHTTCSEEECTTC-EECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECT
T ss_pred CEEECCCCCCC--chHHHHHHhccceEeecccc-ccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCccccccc
Confidence 36677766543 1111111 12344555432 2222222233567899999998743322 45567899999999999
Q ss_pred CcccccC-cccCCCCCCCCEEEccCCCCchh--hHHhcccCcccchhccccCCCCc---------cCCCccceEEecccc
Q 017094 201 TKQKSLQ-ESGIRSLGSLRCLTISGCRDLEH--LFEEIEQLSLLRTLLIHSYDDRK---------NTRPRLRRVFIKEIT 268 (377)
Q Consensus 201 ~~~~~~~-~~~l~~l~~L~~L~l~~~~~~~~--~~~~l~~l~~L~~L~l~~~~~~~---------~~~~~L~~L~l~~~~ 268 (377)
++.+... ...++.+++|+.|++++|..++. +......+++|++|++++|.... ..++.|+.|++++|.
T Consensus 80 ~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 159 (284)
T d2astb2 80 GLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 159 (284)
T ss_dssp TCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred ccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccc
Confidence 9987632 35678899999999999876543 33335678999999999987654 335789999999874
Q ss_pred -cccccchhhhhcCCCCccEEeecCCCCCC-CCCccCCCCccCceecccCcccCCC-CCcCCCCCCCcCeeeccCC
Q 017094 269 -QLLELPQWLLQCCTDTLHTLVIGDCPNFM-ALPGSLKDLEALETLAIRGCPKLSS-LPEDMHHLTTLKLLAIGGC 341 (377)
Q Consensus 269 -~~~~l~~~~~~~~~~~L~~L~l~~~~~~~-~l~~~~~~l~~L~~L~l~~~~~~~~-~~~~l~~l~~L~~L~l~~c 341 (377)
.+.+-....+...+|+|++|++++|..++ .....+..+++|++|++++|..+++ ....+.++|+|+.|++.+|
T Consensus 160 ~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 160 KNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 33332222222678999999999987655 3555677899999999999987763 3345678999999999998
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.59 E-value=6.1e-15 Score=122.84 Aligned_cols=146 Identities=20% Similarity=0.249 Sum_probs=74.1
Q ss_pred hcCCCcccEEeccCccccccCchhhcccccccEeeecCcccccCcccCCCCCCCCEEEccCCCCchhhHHhcccCcccch
Q 017094 164 ICELQSLQTLDLEGCLELEELPKDIRYLVILRVFALTTKQKSLQESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRT 243 (377)
Q Consensus 164 ~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~ 243 (377)
+..+++|++|++++| .+..++ .++.+++|++|++++|.++..+ .+..+++|+.|++.+|.... ...+..++.++.
T Consensus 64 l~~l~~L~~L~L~~n-~i~~l~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~ 138 (210)
T d1h6ta2 64 IQYLPNVTKLFLNGN-KLTDIK-PLANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLEHNGISD--INGLVHLPQLES 138 (210)
T ss_dssp GGGCTTCCEEECCSS-CCCCCG-GGTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCE
T ss_pred HhhCCCCCEEeCCCc-cccCcc-ccccCccccccccccccccccc-cccccccccccccccccccc--cccccccccccc
Confidence 344444444444443 233333 2344444555555544444332 34555555555555544321 123444455555
Q ss_pred hccccCCCCccCCCccceEEecccccccccchhhhhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCC
Q 017094 244 LLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSL 323 (377)
Q Consensus 244 L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~ 323 (377)
++++++... +.+ .. ..+++|+.+++++|. +..++. +.++++|++|++++| .++++
T Consensus 139 l~~~~n~l~-------------------~~~-~~--~~l~~L~~l~l~~n~-l~~i~~-l~~l~~L~~L~Ls~N-~i~~l 193 (210)
T d1h6ta2 139 LYLGNNKIT-------------------DIT-VL--SRLTKLDTLSLEDNQ-ISDIVP-LAGLTKLQNLYLSKN-HISDL 193 (210)
T ss_dssp EECCSSCCC-------------------CCG-GG--GGCTTCSEEECCSSC-CCCCGG-GTTCTTCCEEECCSS-CCCBC
T ss_pred ccccccccc-------------------ccc-cc--ccccccccccccccc-cccccc-ccCCCCCCEEECCCC-CCCCC
Confidence 555444321 111 11 445667777777664 334442 566777777777776 45566
Q ss_pred CcCCCCCCCcCeeeccC
Q 017094 324 PEDMHHLTTLKLLAIGG 340 (377)
Q Consensus 324 ~~~l~~l~~L~~L~l~~ 340 (377)
+ .+.++++|++|++++
T Consensus 194 ~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 194 R-ALAGLKNLDVLELFS 209 (210)
T ss_dssp G-GGTTCTTCSEEEEEE
T ss_pred h-hhcCCCCCCEEEccC
Confidence 5 366777777777653
No 15
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.58 E-value=8.1e-15 Score=122.11 Aligned_cols=166 Identities=19% Similarity=0.256 Sum_probs=131.9
Q ss_pred ccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccccEee
Q 017094 119 KSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFA 198 (377)
Q Consensus 119 ~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~ 198 (377)
.+..|+.|+++++.+..++ .+..+++|++|++++| .+..++. ++.+++|++|++++| .+..+| .+..+++|+.|+
T Consensus 44 ~L~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n-~i~~l~~-~~~l~~L~~L~l~~n-~i~~l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 44 ELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGN-KLTDIKP-LANLKNLGWLFLDEN-KVKDLS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSS-CCCCGG-GGTTCTTCCEEE
T ss_pred HhcCccEEECcCCCCCCch-hHhhCCCCCEEeCCCc-cccCccc-cccCccccccccccc-cccccc-cccccccccccc
Confidence 3568999999999998775 4788999999999976 5666664 788999999999987 566676 588899999999
Q ss_pred ecCcccccCcccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhhh
Q 017094 199 LTTKQKSLQESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWLL 278 (377)
Q Consensus 199 l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~ 278 (377)
++++..... ..+..++.++.+++.+|.... +..+..+++|+.+++++|... .++. +
T Consensus 119 l~~~~~~~~-~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~-------------------~i~~-l- 174 (210)
T d1h6ta2 119 LEHNGISDI-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS-------------------DIVP-L- 174 (210)
T ss_dssp CTTSCCCCC-GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCC-------------------CCGG-G-
T ss_pred ccccccccc-ccccccccccccccccccccc--ccccccccccccccccccccc-------------------cccc-c-
Confidence 999988765 468889999999999887543 234566778888888776532 3332 3
Q ss_pred hcCCCCccEEeecCCCCCCCCCccCCCCccCceecccC
Q 017094 279 QCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRG 316 (377)
Q Consensus 279 ~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~ 316 (377)
..+++|++|++++|. +..++ .+.++++|++|+|++
T Consensus 175 -~~l~~L~~L~Ls~N~-i~~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 175 -AGLTKLQNLYLSKNH-ISDLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp -TTCTTCCEEECCSSC-CCBCG-GGTTCTTCSEEEEEE
T ss_pred -cCCCCCCEEECCCCC-CCCCh-hhcCCCCCCEEEccC
Confidence 678999999999985 66776 588999999999874
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.58 E-value=1.2e-14 Score=122.57 Aligned_cols=190 Identities=21% Similarity=0.230 Sum_probs=135.9
Q ss_pred hcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCc
Q 017094 90 LSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQS 169 (377)
Q Consensus 90 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~ 169 (377)
..++.+|+.|.+.++.... + ..+..+++|++|++++|.+..++ .+..+++|+++++++| ..+.++ .+..+++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~----l-~~l~~l~~L~~L~ls~n~i~~~~-~l~~l~~l~~l~~~~n-~~~~i~-~l~~l~~ 108 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTT----I-EGVQYLNNLIGLELKDNQITDLA-PLKNLTKITELELSGN-PLKNVS-AIAGLQS 108 (227)
T ss_dssp HHHHHTCCEEECTTSCCCC----C-TTGGGCTTCCEEECCSSCCCCCG-GGTTCCSCCEEECCSC-CCSCCG-GGTTCTT
T ss_pred HHHcCCcCEEECCCCCCCc----c-hhHhcCCCCcEeecCCceeeccc-cccccccccccccccc-cccccc-ccccccc
Confidence 4566788888888875432 2 23678889999999988887664 3788888999998865 455655 4778889
Q ss_pred ccEEeccCccccccCchhhcccccccEeeecCcccccCcccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccC
Q 017094 170 LQTLDLEGCLELEELPKDIRYLVILRVFALTTKQKSLQESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSY 249 (377)
Q Consensus 170 L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~ 249 (377)
|+.+++++|.. ... ..+...+.++.+.++++.+... ..+..+++|+.|.+++|..... ..++++++|+.|++++|
T Consensus 109 L~~l~l~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n 183 (227)
T d1h6ua2 109 IKTLDLTSTQI-TDV-TPLAGLSNLQVLYLDLNQITNI-SPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDN 183 (227)
T ss_dssp CCEEECTTSCC-CCC-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSS
T ss_pred ccccccccccc-ccc-chhccccchhhhhchhhhhchh-hhhccccccccccccccccccc--hhhcccccceecccCCC
Confidence 99999887643 223 3366777888888888776654 3567788899999988765332 23667777777777766
Q ss_pred CCCccCCCccceEEecccccccccchhhhhcCCCCccEEeecCCCCCCCCCccCCCCccCceecccC
Q 017094 250 DDRKNTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRG 316 (377)
Q Consensus 250 ~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~ 316 (377)
.. .+++. + ..+++|++|++++|. +..++. +.++++|+.|++++
T Consensus 184 ~l-------------------~~l~~-l--~~l~~L~~L~Ls~N~-lt~i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 184 KI-------------------SDISP-L--ASLPNLIEVHLKNNQ-ISDVSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp CC-------------------CCCGG-G--GGCTTCCEEECTTSC-CCBCGG-GTTCTTCCEEEEEE
T ss_pred cc-------------------CCChh-h--cCCCCCCEEECcCCc-CCCCcc-cccCCCCCEEEeeC
Confidence 42 23432 3 677889999999874 666663 77889999998864
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=2.1e-14 Score=118.45 Aligned_cols=53 Identities=28% Similarity=0.358 Sum_probs=28.5
Q ss_pred cCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCee
Q 017094 280 CCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLL 336 (377)
Q Consensus 280 ~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L 336 (377)
..+++|+.|++.+|. +..++ .+.++++|++|++++| .+++++ .+..+++|++|
T Consensus 147 ~~~~~L~~L~l~~n~-l~~l~-~l~~l~~L~~L~ls~N-~i~~i~-~l~~L~~L~~L 199 (199)
T d2omxa2 147 SGLTSLQQLNFSSNQ-VTDLK-PLANLTTLERLDISSN-KVSDIS-VLAKLTNLESL 199 (199)
T ss_dssp TTCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSS-CCCCCG-GGGGCTTCSEE
T ss_pred ccccccccccccccc-ccCCc-cccCCCCCCEEECCCC-CCCCCc-cccCCCCCCcC
Confidence 344556666665543 33333 2556666666666666 345554 24556666554
No 18
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.56 E-value=1.9e-13 Score=122.51 Aligned_cols=60 Identities=27% Similarity=0.269 Sum_probs=46.2
Q ss_pred CCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCCCccccCC
Q 017094 281 CTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCPALSERCK 349 (377)
Q Consensus 281 ~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~~l~~~~~ 349 (377)
.+++|++|++++|. +..+|. .+++|++|++++| .++.+|.. +++|++|++++|+ ++.++.
T Consensus 282 ~~~~L~~L~Ls~N~-l~~lp~---~~~~L~~L~L~~N-~L~~l~~~---~~~L~~L~L~~N~-L~~lp~ 341 (353)
T d1jl5a_ 282 LPPSLEELNVSNNK-LIELPA---LPPRLERLIASFN-HLAEVPEL---PQNLKQLHVEYNP-LREFPD 341 (353)
T ss_dssp CCTTCCEEECCSSC-CSCCCC---CCTTCCEEECCSS-CCSCCCCC---CTTCCEEECCSSC-CSSCCC
T ss_pred cCCCCCEEECCCCc-cCcccc---ccCCCCEEECCCC-cCCccccc---cCCCCEEECcCCc-CCCCCc
Confidence 45789999999875 567775 3678999999987 56777753 4689999999997 776654
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.54 E-value=3.8e-14 Score=116.91 Aligned_cols=158 Identities=19% Similarity=0.249 Sum_probs=83.3
Q ss_pred CCcEEEEEeccccccchhhhhcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccceE
Q 017094 70 RVRHLSFAAANALRNDFSSLLSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYL 149 (377)
Q Consensus 70 ~l~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L 149 (377)
++++|.+.++.+...+ .+..+++|++|++++|...... .+..+++|++|++++|.+..++ .+..+++|++|
T Consensus 41 ~l~~L~l~~~~i~~l~---~l~~l~nL~~L~Ls~N~l~~~~-----~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L 111 (199)
T d2omxa2 41 QVTTLQADRLGIKSID---GVEYLNNLTQINFSNNQLTDIT-----PLKNLTKLVDILMNNNQIADIT-PLANLTNLTGL 111 (199)
T ss_dssp TCCEEECTTSCCCCCT---TGGGCTTCCEEECCSSCCCCCG-----GGTTCTTCCEEECCSSCCCCCG-GGTTCTTCSEE
T ss_pred CCCEEECCCCCCCCcc---ccccCCCcCcCccccccccCcc-----cccCCccccccccccccccccc-ccccccccccc
Confidence 5556666555554432 3455666666666665443211 1555666666666666655544 35556666666
Q ss_pred eccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccccEeeecCcccccCcccCCCCCCCCEEEccCCCCch
Q 017094 150 DLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFALTTKQKSLQESGIRSLGSLRCLTISGCRDLE 229 (377)
Q Consensus 150 ~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 229 (377)
+++++. ....+ .+..+++|+.|++++| .+..++ .+..+++|+.|++.+|.++..+ .++.+++|+.|++++|+. +
T Consensus 112 ~l~~~~-~~~~~-~~~~l~~L~~L~l~~n-~l~~~~-~l~~~~~L~~L~l~~n~l~~l~-~l~~l~~L~~L~ls~N~i-~ 185 (199)
T d2omxa2 112 TLFNNQ-ITDID-PLKNLTNLNRLELSSN-TISDIS-ALSGLTSLQQLNFSSNQVTDLK-PLANLTTLERLDISSNKV-S 185 (199)
T ss_dssp ECCSSC-CCCCG-GGTTCTTCSEEECCSS-CCCCCG-GGTTCTTCSEEECCSSCCCCCG-GGTTCTTCCEEECCSSCC-C
T ss_pred cccccc-ccccc-ccchhhhhHHhhhhhh-hhcccc-cccccccccccccccccccCCc-cccCCCCCCEEECCCCCC-C
Confidence 666442 22222 2555666666666654 233333 3555666666666666555542 455666666666666543 2
Q ss_pred hhHHhcccCcccch
Q 017094 230 HLFEEIEQLSLLRT 243 (377)
Q Consensus 230 ~~~~~l~~l~~L~~ 243 (377)
.++ .++.+++|++
T Consensus 186 ~i~-~l~~L~~L~~ 198 (199)
T d2omxa2 186 DIS-VLAKLTNLES 198 (199)
T ss_dssp CCG-GGGGCTTCSE
T ss_pred CCc-cccCCCCCCc
Confidence 222 3444555444
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=3.9e-14 Score=120.60 Aligned_cols=197 Identities=16% Similarity=0.219 Sum_probs=117.7
Q ss_pred CcccEEEeCCCccccCCc-CcCCCCccceEeccCCCcccccC-hhhcCCCcccEEeccCccccccC-chhhcccccccEe
Q 017094 121 QFLRVLNLRESALEVCPR-KMGNLKHMRYLDLSRNSKIKKLP-KSICELQSLQTLDLEGCLELEEL-PKDIRYLVILRVF 197 (377)
Q Consensus 121 ~~L~~L~L~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~l~-~~~~~l~~L~~L~l~~~~~~~~~-p~~l~~l~~L~~L 197 (377)
+++++|++++|.+..+|. .+.++++|++|++++|.....++ .++..+++++++.+..+..+... +..+..+++|+++
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 467888888888877765 46778888888888765544443 34667788888877654444443 4456778888888
Q ss_pred eecCcccccCcccCCCCCCCCEE---EccCCCCchhhH-HhcccCc-ccchhccccCCCCccCCCccceEEecccccccc
Q 017094 198 ALTTKQKSLQESGIRSLGSLRCL---TISGCRDLEHLF-EEIEQLS-LLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLE 272 (377)
Q Consensus 198 ~l~~~~~~~~~~~l~~l~~L~~L---~l~~~~~~~~~~-~~l~~l~-~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~ 272 (377)
+++++.+...+ ....+.+++.+ ...++. ...++ ..+..++ .+..|++.++ .+..
T Consensus 109 ~l~~~~l~~~~-~~~~~~~l~~l~~~~~~n~~-l~~i~~~~~~~~~~~l~~L~l~~n-------------------~l~~ 167 (242)
T d1xwdc1 109 LISNTGIKHLP-DVHKIHSLQKVLLDIQDNIN-IHTIERNSFVGLSFESVILWLNKN-------------------GIQE 167 (242)
T ss_dssp EEESCCCCSCC-CCTTTCBSSCEEEEEESCTT-CCEECTTSSTTSBSSCEEEECCSS-------------------CCCE
T ss_pred ccchhhhcccc-cccccccccccccccccccc-cccccccccccccccceeeecccc-------------------cccc
Confidence 88887776542 33344444433 323222 22121 1122221 3333433332 2334
Q ss_pred cchhhhhcCCCCccEEeecCCCCCCCCCcc-CCCCccCceecccCcccCCCCCc-CCCCCCCcCeeeccCC
Q 017094 273 LPQWLLQCCTDTLHTLVIGDCPNFMALPGS-LKDLEALETLAIRGCPKLSSLPE-DMHHLTTLKLLAIGGC 341 (377)
Q Consensus 273 l~~~~~~~~~~~L~~L~l~~~~~~~~l~~~-~~~l~~L~~L~l~~~~~~~~~~~-~l~~l~~L~~L~l~~c 341 (377)
++... ...+++.++....+..+..+|.. +.++++|++|++++|. ++.+|. .+.++++|+.+++.++
T Consensus 168 i~~~~--~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~-l~~l~~~~~~~l~~L~~l~~~~l 235 (242)
T d1xwdc1 168 IHNCA--FNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR-IHSLPSYGLENLKKLRARSTYNL 235 (242)
T ss_dssp ECTTT--TTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSC-CCCCCSSSCTTCCEEESSSEESS
T ss_pred ccccc--ccchhhhccccccccccccccHHHhcCCCCCCEEECCCCc-CCccCHHHHcCCcccccCcCCCC
Confidence 55444 34566677766555667777654 6788999999998874 566654 4566666666665544
No 21
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.45 E-value=3.3e-12 Score=114.20 Aligned_cols=264 Identities=17% Similarity=0.200 Sum_probs=150.0
Q ss_pred CCcEEEEEeccccccchhhhhcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccceE
Q 017094 70 RVRHLSFAAANALRNDFSSLLSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYL 149 (377)
Q Consensus 70 ~l~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L 149 (377)
++++|++.+..+.. +|+ ..++|++|++++|..... + ..+.+|+.|++.++.+..++.. .+.|++|
T Consensus 39 ~l~~LdLs~~~L~~--lp~---~~~~L~~L~Ls~N~l~~l----p---~~~~~L~~L~l~~n~l~~l~~l---p~~L~~L 103 (353)
T d1jl5a_ 39 QAHELELNNLGLSS--LPE---LPPHLESLVASCNSLTEL----P---ELPQSLKSLLVDNNNLKALSDL---PPLLEYL 103 (353)
T ss_dssp TCSEEECTTSCCSC--CCS---CCTTCSEEECCSSCCSSC----C---CCCTTCCEEECCSSCCSCCCSC---CTTCCEE
T ss_pred CCCEEEeCCCCCCC--CCC---CCCCCCEEECCCCCCccc----c---cchhhhhhhhhhhcccchhhhh---ccccccc
Confidence 56677777665543 332 246777777777654311 1 1245777777777777655432 1357778
Q ss_pred eccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccccEeeecCcccccCcccCCCCCCCCEEEccCCCCch
Q 017094 150 DLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFALTTKQKSLQESGIRSLGSLRCLTISGCRDLE 229 (377)
Q Consensus 150 ~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 229 (377)
++++| .+..+|. ++.+++|++|+++++ .....+.. ...+..+.+..+..... ..+..++.++.+.+.++....
T Consensus 104 ~L~~n-~l~~lp~-~~~l~~L~~L~l~~~-~~~~~~~~---~~~l~~l~~~~~~~~~~-~~l~~l~~l~~L~l~~n~~~~ 176 (353)
T d1jl5a_ 104 GVSNN-QLEKLPE-LQNSSFLKIIDVDNN-SLKKLPDL---PPSLEFIAAGNNQLEEL-PELQNLPFLTAIYADNNSLKK 176 (353)
T ss_dssp ECCSS-CCSSCCC-CTTCTTCCEEECCSS-CCSCCCCC---CTTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSS
T ss_pred ccccc-ccccccc-hhhhccceeeccccc-cccccccc---cccccchhhcccccccc-ccccccccceecccccccccc
Confidence 88765 5666664 567777888887765 33333332 33455555555444332 456677788888877665321
Q ss_pred h------------------hHHhcccCcccchhccccCCCCc--cCCCccceEEecccccccccchhhhhcCCCCccEEe
Q 017094 230 H------------------LFEEIEQLSLLRTLLIHSYDDRK--NTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHTLV 289 (377)
Q Consensus 230 ~------------------~~~~l~~l~~L~~L~l~~~~~~~--~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~L~ 289 (377)
. .......++.|+.+.++++.... .....+..+.+.+.... ..+ ...+.+....
T Consensus 177 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~~l~~~~~~~~~~~-~~~-----~~~~~l~~~~ 250 (353)
T d1jl5a_ 177 LPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLT-DLP-----ELPQSLTFLD 250 (353)
T ss_dssp CCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCSCCTTCCEEECCSSCCS-CCC-----CCCTTCCEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccc-----cccccccccc
Confidence 0 01123445666777776654433 22334555555543221 111 1122333333
Q ss_pred ecCCCC--C--------------CCCCccCCCCccCceecccCcccCCCCCcCCCCCCCcCeeeccCCCCccccCCCCCC
Q 017094 290 IGDCPN--F--------------MALPGSLKDLEALETLAIRGCPKLSSLPEDMHHLTTLKLLAIGGCPALSERCKPPTG 353 (377)
Q Consensus 290 l~~~~~--~--------------~~l~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~c~~l~~~~~~~~~ 353 (377)
+..+.. + ..++.....+++|++|++++| .++.+|. .+++|+.|++++| .++.++..
T Consensus 251 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N-~l~~lp~---~~~~L~~L~L~~N-~L~~l~~~--- 322 (353)
T d1jl5a_ 251 VSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNN-KLIELPA---LPPRLERLIASFN-HLAEVPEL--- 322 (353)
T ss_dssp CCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSS-CCSCCCC---CCTTCCEEECCSS-CCSCCCCC---
T ss_pred cccccccccccccchhcccccccCccccccccCCCCCEEECCCC-ccCcccc---ccCCCCEEECCCC-cCCccccc---
Confidence 322110 0 012222345689999999998 5677885 3689999999988 46665422
Q ss_pred CCCCCCCccceEEeCCCccCC
Q 017094 354 EDWPKIAHITQIELDDEIIKS 374 (377)
Q Consensus 354 ~~~~~i~~~~~~~~~~~~~~~ 374 (377)
..+++.+.+.++++++
T Consensus 323 -----~~~L~~L~L~~N~L~~ 338 (353)
T d1jl5a_ 323 -----PQNLKQLHVEYNPLRE 338 (353)
T ss_dssp -----CTTCCEEECCSSCCSS
T ss_pred -----cCCCCEEECcCCcCCC
Confidence 3578888888887764
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.39 E-value=5.4e-13 Score=100.74 Aligned_cols=100 Identities=26% Similarity=0.345 Sum_probs=75.8
Q ss_pred cEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccccEeeecCcc
Q 017094 124 RVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFALTTKQ 203 (377)
Q Consensus 124 ~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~~ 203 (377)
|+|++++|.++.++ .+..+++|++|++++| .++.+|+.++.+++|++|++++| .+..+| .+..+++|++|++++|.
T Consensus 1 R~L~Ls~n~l~~l~-~l~~l~~L~~L~ls~N-~l~~lp~~~~~l~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLTVLC-HLEQLLLVTHLDLSHN-RLRALPPALAALRCLEVLQASDN-ALENVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTTSCCSSCC-CGGGGTTCCEEECCSS-CCCCCCGGGGGCTTCCEEECCSS-CCCCCG-GGTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCCCCCc-ccccCCCCCEEECCCC-ccCcchhhhhhhhcccccccccc-cccccC-ccccccccCeEECCCCc
Confidence 57788888887775 4777888888888865 66777777888888888888876 556665 47788888888888888
Q ss_pred cccCc--ccCCCCCCCCEEEccCCCC
Q 017094 204 KSLQE--SGIRSLGSLRCLTISGCRD 227 (377)
Q Consensus 204 ~~~~~--~~l~~l~~L~~L~l~~~~~ 227 (377)
+...+ ..+..+++|+.|++++|+.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcC
Confidence 77543 4567788888888888764
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=3.1e-13 Score=107.19 Aligned_cols=126 Identities=23% Similarity=0.188 Sum_probs=71.1
Q ss_pred hccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCchh-hcccccccE
Q 017094 118 SKSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKD-IRYLVILRV 196 (377)
Q Consensus 118 ~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~-l~~l~~L~~ 196 (377)
.++..++.|+|++|.+..++..+..+++|++|++++| .+..++ .+..+++|++|++++| .+..+|.. +..+++|+.
T Consensus 15 ~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N-~i~~l~-~~~~l~~L~~L~ls~N-~i~~l~~~~~~~l~~L~~ 91 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDN-EIRKLD-GFPLLRRLKTLLVNNN-RICRIGEGLDQALPDLTE 91 (162)
T ss_dssp ECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSS-CCCEEC-CCCCCSSCCEEECCSS-CCCEECSCHHHHCTTCCE
T ss_pred cCcCcCcEEECCCCCCCccCccccccccCCEEECCCC-CCCccC-CcccCcchhhhhcccc-cccCCCcccccccccccc
Confidence 3444566666666666666555555666666666654 455553 2556666666666665 34444333 345666666
Q ss_pred eeecCcccccCc--ccCCCCCCCCEEEccCCCCchh---hHHhcccCcccchhcc
Q 017094 197 FALTTKQKSLQE--SGIRSLGSLRCLTISGCRDLEH---LFEEIEQLSLLRTLLI 246 (377)
Q Consensus 197 L~l~~~~~~~~~--~~l~~l~~L~~L~l~~~~~~~~---~~~~l~~l~~L~~L~l 246 (377)
|++++|.+...+ ..+..+++|+.|++.+|..... .+..+..+++|+.|+-
T Consensus 92 L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 92 LILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp EECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred ceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence 666666665432 3455666677777766653221 1223455666666653
No 24
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=3.9e-12 Score=107.88 Aligned_cols=203 Identities=15% Similarity=0.176 Sum_probs=132.2
Q ss_pred cEEEeCCCccccCCcCcCCCCccceEeccCCCcccccCh-hhcCCCcccEEeccCccccccCc-hhhcccccccEeeecC
Q 017094 124 RVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPK-SICELQSLQTLDLEGCLELEELP-KDIRYLVILRVFALTT 201 (377)
Q Consensus 124 ~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~p-~~l~~l~~L~~L~l~~ 201 (377)
+.++.++..+..+|+.+. +++++|++++| .+..+|. +|.++++|++|++++|.....++ ..+..+++++++.+..
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n-~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLT-KLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESC-CCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCCCcCCCCC--CCCCEEECcCC-cCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 567777777888886653 58999999975 6777765 57889999999999886555443 3467788888888764
Q ss_pred -ccccc-CcccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhhhh
Q 017094 202 -KQKSL-QESGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWLLQ 279 (377)
Q Consensus 202 -~~~~~-~~~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~ 279 (377)
+.+.. .+..+..+++|+.+++.++.... .+ ....+..++.+.... .++..+..++...+.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~-~~-~~~~~~~l~~l~~~~----------------~~n~~l~~i~~~~~~ 149 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKH-LP-DVHKIHSLQKVLLDI----------------QDNINIHTIERNSFV 149 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCS-CC-CCTTTCBSSCEEEEE----------------ESCTTCCEECTTSST
T ss_pred cccccccccccccccccccccccchhhhcc-cc-ccccccccccccccc----------------ccccccccccccccc
Confidence 34443 34567888999999998876432 11 122233333332211 111122344333222
Q ss_pred cCCCCccEEeecCCCCCCCCCccCCCCccCceecccCcccCCCCCc-CCCCCCCcCeeeccCCCCccccCC
Q 017094 280 CCTDTLHTLVIGDCPNFMALPGSLKDLEALETLAIRGCPKLSSLPE-DMHHLTTLKLLAIGGCPALSERCK 349 (377)
Q Consensus 280 ~~~~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~~~-~l~~l~~L~~L~l~~c~~l~~~~~ 349 (377)
.....++.|++.++. +..++.......+++++....+..++.+|. .+.++++|++|++++++ ++.++.
T Consensus 150 ~~~~~l~~L~l~~n~-l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~-l~~l~~ 218 (242)
T d1xwdc1 150 GLSFESVILWLNKNG-IQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR-IHSLPS 218 (242)
T ss_dssp TSBSSCEEEECCSSC-CCEECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSC-CCCCCS
T ss_pred cccccceeeeccccc-ccccccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCc-CCccCH
Confidence 333578889998754 556665555667777776555567888875 46889999999999986 555543
No 25
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=4.6e-13 Score=124.17 Aligned_cols=129 Identities=17% Similarity=0.123 Sum_probs=70.8
Q ss_pred CCCCCEEEccCCCCchh----hHHhcccCcccchhccccCCCCc-----------cCCCccceEEecccccccccchhh-
Q 017094 214 LGSLRCLTISGCRDLEH----LFEEIEQLSLLRTLLIHSYDDRK-----------NTRPRLRRVFIKEITQLLELPQWL- 277 (377)
Q Consensus 214 l~~L~~L~l~~~~~~~~----~~~~l~~l~~L~~L~l~~~~~~~-----------~~~~~L~~L~l~~~~~~~~l~~~~- 277 (377)
...++.+++++|..... ....+...+.++.++++++.... .....|+.++++++.........+
T Consensus 254 ~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~ 333 (460)
T d1z7xw1 254 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 333 (460)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcc
Confidence 34455555555543221 22233445556666665554422 223467888887774332221111
Q ss_pred -hhcCCCCccEEeecCCCCCC----CCCccCC-CCccCceecccCcccCC----CCCcCCCCCCCcCeeeccCCC
Q 017094 278 -LQCCTDTLHTLVIGDCPNFM----ALPGSLK-DLEALETLAIRGCPKLS----SLPEDMHHLTTLKLLAIGGCP 342 (377)
Q Consensus 278 -~~~~~~~L~~L~l~~~~~~~----~l~~~~~-~l~~L~~L~l~~~~~~~----~~~~~l~~l~~L~~L~l~~c~ 342 (377)
+....++|++|++++|...+ .+++.+. ..+.|++|++++|.... .++..+..+++|++|++++++
T Consensus 334 ~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~ 408 (460)
T d1z7xw1 334 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 408 (460)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred cccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCc
Confidence 11455678888888875311 2333332 46678888888885322 233445567888888888874
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.7e-12 Score=102.83 Aligned_cols=129 Identities=15% Similarity=0.133 Sum_probs=102.8
Q ss_pred hhcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChh-hcCC
Q 017094 89 LLSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKS-ICEL 167 (377)
Q Consensus 89 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~-~~~l 167 (377)
.+.++..+|+|++++|..... +..+..+++|++|++++|.+..++ .+..+++|++|++++| .+..+|+. +..+
T Consensus 13 ~~~n~~~lr~L~L~~n~I~~i----~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N-~i~~l~~~~~~~l 86 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIPVI----ENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNN-RICRIGEGLDQAL 86 (162)
T ss_dssp EEECTTSCEEEECTTSCCCSC----CCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSS-CCCEECSCHHHHC
T ss_pred hccCcCcCcEEECCCCCCCcc----CccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccc-cccCCCccccccc
Confidence 366778899999999876533 234567899999999999999884 5889999999999976 56777654 4579
Q ss_pred CcccEEeccCccccccCc--hhhcccccccEeeecCcccccCcc----cCCCCCCCCEEEccC
Q 017094 168 QSLQTLDLEGCLELEELP--KDIRYLVILRVFALTTKQKSLQES----GIRSLGSLRCLTISG 224 (377)
Q Consensus 168 ~~L~~L~l~~~~~~~~~p--~~l~~l~~L~~L~l~~~~~~~~~~----~l~~l~~L~~L~l~~ 224 (377)
++|++|++++| .+..++ ..+..+++|++|++++|.++..+. .+..+++|+.|+...
T Consensus 87 ~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~~~ 148 (162)
T d1a9na_ 87 PDLTELILTNN-SLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQK 148 (162)
T ss_dssp TTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEE
T ss_pred cccccceeccc-cccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCCCC
Confidence 99999999997 455554 357889999999999999876642 467789999997543
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.29 E-value=3.4e-12 Score=96.21 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=82.4
Q ss_pred eEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCcccEEecc
Q 017094 97 RTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLE 176 (377)
Q Consensus 97 ~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~ 176 (377)
|+|++++|.+... ..+..+++|++|++++|.+..+|+.++.+++|++|++++| .+..+|. ++.+++|++|+++
T Consensus 1 R~L~Ls~n~l~~l-----~~l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N-~i~~l~~-~~~l~~L~~L~l~ 73 (124)
T d1dcea3 1 RVLHLAHKDLTVL-----CHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDN-ALENVDG-VANLPRLQELLLC 73 (124)
T ss_dssp SEEECTTSCCSSC-----CCGGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSS-CCCCCGG-GTTCSSCCEEECC
T ss_pred CEEEcCCCCCCCC-----cccccCCCCCEEECCCCccCcchhhhhhhhcccccccccc-cccccCc-cccccccCeEECC
Confidence 5678888766422 1367888999999999999999888899999999999976 6777764 8899999999999
Q ss_pred CccccccCc--hhhcccccccEeeecCcccccC
Q 017094 177 GCLELEELP--KDIRYLVILRVFALTTKQKSLQ 207 (377)
Q Consensus 177 ~~~~~~~~p--~~l~~l~~L~~L~l~~~~~~~~ 207 (377)
+| .+..+| ..+..+++|+.|++++|.+...
T Consensus 74 ~N-~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~ 105 (124)
T d1dcea3 74 NN-RLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105 (124)
T ss_dssp SS-CCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CC-ccCCCCCchhhcCCCCCCEEECCCCcCCcC
Confidence 87 455554 4578899999999999988754
No 28
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.28 E-value=8.3e-13 Score=118.32 Aligned_cols=240 Identities=14% Similarity=0.083 Sum_probs=115.1
Q ss_pred hhhhcccCCceEEEeecCCchh-hHHHHHHHhhccCcccEEEeCCCcccc-----------CCcCcCCCCccceEeccCC
Q 017094 87 SSLLSYLGRLRTIFFSTDDEKT-SQSFVESCFSKSQFLRVLNLRESALEV-----------CPRKMGNLKHMRYLDLSRN 154 (377)
Q Consensus 87 ~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~-----------l~~~~~~l~~L~~L~l~~~ 154 (377)
...+.....++.|++++|.++. ....+...+...++|+.++++++.... +...+..+++|+.|++++|
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 3445666677777777665431 223333445566677777776554321 1223445566777777655
Q ss_pred Cccc----ccChhhcCCCcccEEeccCcccccc----Cch---------hhcccccccEeeecCcccccC-----cccCC
Q 017094 155 SKIK----KLPKSICELQSLQTLDLEGCLELEE----LPK---------DIRYLVILRVFALTTKQKSLQ-----ESGIR 212 (377)
Q Consensus 155 ~~~~----~l~~~~~~l~~L~~L~l~~~~~~~~----~p~---------~l~~l~~L~~L~l~~~~~~~~-----~~~l~ 212 (377)
.... .+...+...++|++|++++|..... +.. .....+.|+.+.++++.+... ...+.
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~ 183 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 183 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred ccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhh
Confidence 3222 1333344566677777766532110 000 012344566666666554321 12234
Q ss_pred CCCCCCEEEccCCCCchh-----hHHhcccCcccchhccccCCCCccCCCccceEEecccccccccchhhhhcCCCCccE
Q 017094 213 SLGSLRCLTISGCRDLEH-----LFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKEITQLLELPQWLLQCCTDTLHT 287 (377)
Q Consensus 213 ~l~~L~~L~l~~~~~~~~-----~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~~~~~~~l~~~~~~~~~~~L~~ 287 (377)
.++.|++|++++|..... +...+..+++|+.|++++|.... .+...+...+ ..+++|++
T Consensus 184 ~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~--------------~g~~~L~~~l--~~~~~L~~ 247 (344)
T d2ca6a1 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH--------------LGSSALAIAL--KSWPNLRE 247 (344)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHH--------------HHHHHHHHHG--GGCTTCCE
T ss_pred hhhhhcccccccccccccccccchhhhhcchhhhcccccccccccc--------------cccccccccc--cccccchh
Confidence 455666666666654322 12224445556666655554321 1112233333 45566666
Q ss_pred EeecCCCCCCC----CCccCC--CCccCceecccCcccCC----CCCcCC-CCCCCcCeeeccCCC
Q 017094 288 LVIGDCPNFMA----LPGSLK--DLEALETLAIRGCPKLS----SLPEDM-HHLTTLKLLAIGGCP 342 (377)
Q Consensus 288 L~l~~~~~~~~----l~~~~~--~l~~L~~L~l~~~~~~~----~~~~~l-~~l~~L~~L~l~~c~ 342 (377)
|++++|..-+. +-+.+. ..+.|++|++++|.... .+...+ .++++|+.|+++++.
T Consensus 248 L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~ 313 (344)
T d2ca6a1 248 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 313 (344)
T ss_dssp EECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred hhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCc
Confidence 66666642211 111111 23456677776664211 122222 145667777776654
No 29
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.27 E-value=8e-12 Score=102.03 Aligned_cols=126 Identities=17% Similarity=0.085 Sum_probs=73.9
Q ss_pred cEEEeCCCccccCCcCcCCCCccceEeccCCCccccc-ChhhcCCCcccEEeccCccccccCchhhcccccccEeeecCc
Q 017094 124 RVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKL-PKSICELQSLQTLDLEGCLELEELPKDIRYLVILRVFALTTK 202 (377)
Q Consensus 124 ~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l-~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~l~~~ 202 (377)
+.++.+++.+..+|..+. +++++|++++|.....+ +..+..+++|++|++++|......+..+..+++|++|++++|
T Consensus 11 ~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 455666666666665542 56666777655332222 334556667777777665444444555666666777777776
Q ss_pred ccccCc-ccCCCCCCCCEEEccCCCCchhhHHhcccCcccchhccccCCC
Q 017094 203 QKSLQE-SGIRSLGSLRCLTISGCRDLEHLFEEIEQLSLLRTLLIHSYDD 251 (377)
Q Consensus 203 ~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 251 (377)
.+...+ ..|..+++|++|++++|+...--+..+..+++|++|++++|..
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccccc
Confidence 666543 3456667777777776654433334456666666666666553
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.23 E-value=2.8e-13 Score=111.30 Aligned_cols=128 Identities=23% Similarity=0.286 Sum_probs=85.0
Q ss_pred HHhhccCcccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCchhhcccccc
Q 017094 115 SCFSKSQFLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELPKDIRYLVIL 194 (377)
Q Consensus 115 ~~~~~~~~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L 194 (377)
..+..+++|+.|+|++|.++.++ .+..+++|++|++++| .+..+|.....+++|++|++++| .+..++ .+..+++|
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N-~i~~i~~~~~~~~~L~~L~l~~N-~i~~l~-~~~~l~~L 117 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRN-LIKKIENLDAVADTLEELWISYN-QIASLS-GIEKLVNL 117 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEE-EECSCSSHHHHHHHCCEEECSEE-ECCCHH-HHHHHHHS
T ss_pred hHHhcccccceeECcccCCCCcc-cccCCccccChhhccc-ccccccccccccccccccccccc-cccccc-cccccccc
Confidence 44666777777777777777664 4667777888888765 56666655555667788888776 455443 46777788
Q ss_pred cEeeecCcccccCc--ccCCCCCCCCEEEccCCCCchhh----------HHhcccCcccchhcc
Q 017094 195 RVFALTTKQKSLQE--SGIRSLGSLRCLTISGCRDLEHL----------FEEIEQLSLLRTLLI 246 (377)
Q Consensus 195 ~~L~l~~~~~~~~~--~~l~~l~~L~~L~l~~~~~~~~~----------~~~l~~l~~L~~L~l 246 (377)
+.|++++|.++..+ ..+..+++|+.|++++|+..... ...+..+|+|+.|+-
T Consensus 118 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD~ 181 (198)
T d1m9la_ 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDG 181 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEESS
T ss_pred cccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeCC
Confidence 88888887776543 35677888888888877532211 112456777777763
No 31
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.22 E-value=1.4e-11 Score=110.05 Aligned_cols=237 Identities=13% Similarity=0.054 Sum_probs=150.8
Q ss_pred CCCcEEEEEecccccc---chhhhhcccCCceEEEeecCCchh-------hHHHHHHHhhccCcccEEEeCCCcccc---
Q 017094 69 KRVRHLSFAAANALRN---DFSSLLSYLGRLRTIFFSTDDEKT-------SQSFVESCFSKSQFLRVLNLRESALEV--- 135 (377)
Q Consensus 69 ~~l~~L~l~~~~~~~~---~~~~~~~~~~~L~~L~l~~~~~~~-------~~~~~~~~~~~~~~L~~L~L~~~~~~~--- 135 (377)
..++.|.+.++.+... .+...+...++|+.+.++++.... ....+...+..+++|+.|++++|.+..
T Consensus 31 ~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 110 (344)
T d2ca6a1 31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 110 (344)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccccccc
Confidence 3678888887755442 234456778899999998765331 123344556778899999999987652
Q ss_pred --CCcCcCCCCccceEeccCCCcccc----cCh---------hhcCCCcccEEeccCcccc----ccCchhhcccccccE
Q 017094 136 --CPRKMGNLKHMRYLDLSRNSKIKK----LPK---------SICELQSLQTLDLEGCLEL----EELPKDIRYLVILRV 196 (377)
Q Consensus 136 --l~~~~~~l~~L~~L~l~~~~~~~~----l~~---------~~~~l~~L~~L~l~~~~~~----~~~p~~l~~l~~L~~ 196 (377)
+...+...++|+.|++++|..... +.. .....+.|+.+.++++... ..+...+..++.|+.
T Consensus 111 ~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~ 190 (344)
T d2ca6a1 111 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 190 (344)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred cchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhcc
Confidence 344455678999999997742111 111 1134678999999876422 223445677889999
Q ss_pred eeecCcccccC------cccCCCCCCCCEEEccCCCCch----hhHHhcccCcccchhccccCCCCccCCCccceEEecc
Q 017094 197 FALTTKQKSLQ------ESGIRSLGSLRCLTISGCRDLE----HLFEEIEQLSLLRTLLIHSYDDRKNTRPRLRRVFIKE 266 (377)
Q Consensus 197 L~l~~~~~~~~------~~~l~~l~~L~~L~l~~~~~~~----~~~~~l~~l~~L~~L~l~~~~~~~~~~~~L~~L~l~~ 266 (377)
|++++|.+... ...+..+++|+.|++++|.... .+...+..+++|++|++++|....
T Consensus 191 L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~------------- 257 (344)
T d2ca6a1 191 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA------------- 257 (344)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH-------------
T ss_pred cccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCc-------------
Confidence 99999887632 2456778999999999987543 244567788889999998886543
Q ss_pred cccccccchhhhhcCCCCccEEeecCCCCCC----CCCccCC-CCccCceecccCccc
Q 017094 267 ITQLLELPQWLLQCCTDTLHTLVIGDCPNFM----ALPGSLK-DLEALETLAIRGCPK 319 (377)
Q Consensus 267 ~~~~~~l~~~~~~~~~~~L~~L~l~~~~~~~----~l~~~~~-~l~~L~~L~l~~~~~ 319 (377)
.+...+...+.....+.|++|++++|..-. .+...+. .+++|++|++++|..
T Consensus 258 -~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~ 314 (344)
T d2ca6a1 258 -RGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 314 (344)
T ss_dssp -HHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred -hhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcC
Confidence 111222222211234567777777765211 1222222 456777888877654
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.20 E-value=3.3e-13 Score=110.80 Aligned_cols=156 Identities=17% Similarity=0.159 Sum_probs=113.5
Q ss_pred hhcCCCCCCCCCcEEEEEeccccccchhhhhcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCcC
Q 017094 60 VNSDCQSIPKRVRHLSFAAANALRNDFSSLLSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPRK 139 (377)
Q Consensus 60 ~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~~ 139 (377)
+.......+...+.+.+.+.......++..+..+++|+.|++++|..... ..+..+++|++|++++|.+..+|..
T Consensus 14 ~~~~~~~~~~~~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i-----~~l~~l~~L~~L~Ls~N~i~~i~~~ 88 (198)
T d1m9la_ 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-----SSLSGMENLRILSLGRNLIKKIENL 88 (198)
T ss_dssp HHHTTCCCCTTCSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESCC-----CCHHHHTTCCEEECCEEEECSCSSH
T ss_pred HHHHcCCcccccceeeeecccCchhhhhhHHhcccccceeECcccCCCCc-----ccccCCccccChhhccccccccccc
Confidence 33334444445666666654333334556788999999999998765422 2377889999999999999888876
Q ss_pred cCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCc--hhhcccccccEeeecCcccccCccc-------
Q 017094 140 MGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELP--KDIRYLVILRVFALTTKQKSLQESG------- 210 (377)
Q Consensus 140 ~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p--~~l~~l~~L~~L~l~~~~~~~~~~~------- 210 (377)
...+++|++|++++| .+..++ .+..+++|++|++++| .+..++ ..+..+++|+.|++++|.+...+..
T Consensus 89 ~~~~~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 165 (198)
T d1m9la_ 89 DAVADTLEELWISYN-QIASLS-GIEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEY 165 (198)
T ss_dssp HHHHHHCCEEECSEE-ECCCHH-HHHHHHHSSEEEESEE-ECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHH
T ss_pred ccccccccccccccc-cccccc-cccccccccccccccc-hhccccccccccCCCccceeecCCCccccCcccccchhhH
Confidence 666788999999976 666665 4788999999999987 455554 3578899999999999977643211
Q ss_pred ----CCCCCCCCEEEcc
Q 017094 211 ----IRSLGSLRCLTIS 223 (377)
Q Consensus 211 ----l~~l~~L~~L~l~ 223 (377)
+..+|+|+.|+-.
T Consensus 166 r~~vi~~lp~L~~LD~~ 182 (198)
T d1m9la_ 166 RIEVVKRLPNLKKLDGM 182 (198)
T ss_dssp HHHHHHHCSSCCEESSG
T ss_pred HHHHHHHCCCcCEeCCc
Confidence 4568889988743
No 33
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.17 E-value=2.9e-11 Score=98.58 Aligned_cols=107 Identities=23% Similarity=0.223 Sum_probs=87.3
Q ss_pred CcccEEEeCCCcccc-C-CcCcCCCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccC-chhhcccccccEe
Q 017094 121 QFLRVLNLRESALEV-C-PRKMGNLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEEL-PKDIRYLVILRVF 197 (377)
Q Consensus 121 ~~L~~L~L~~~~~~~-l-~~~~~~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~-p~~l~~l~~L~~L 197 (377)
.++++|+|++|.+.. + +..+..+++|++|++++|......+..+..+++|++|++++| .+..+ |..|.++++|++|
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N-~l~~l~~~~F~~l~~L~~L 107 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN-KIKEISNKMFLGLHQLKTL 107 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC-CCCEECSSSSTTCTTCCEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc-cccccCHHHHhCCCccccc
Confidence 578999999999974 3 456788999999999987555556677888999999999997 45555 4457899999999
Q ss_pred eecCcccccCc-ccCCCCCCCCEEEccCCCCc
Q 017094 198 ALTTKQKSLQE-SGIRSLGSLRCLTISGCRDL 228 (377)
Q Consensus 198 ~l~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~ 228 (377)
++++|.++.++ ..+..+++|++|++++|...
T Consensus 108 ~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 108 NLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp ECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred ccCCccccccCHHHhcCCcccccccccccccc
Confidence 99999999765 45788999999999998753
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=1.5e-12 Score=120.57 Aligned_cols=301 Identities=17% Similarity=0.152 Sum_probs=181.3
Q ss_pred CCcEEEEEeccccccchhhhhcccCCceEEEeecCCchh-hHHHHHHHhhccCcccEEEeCCCcccc-----CCcCcC-C
Q 017094 70 RVRHLSFAAANALRNDFSSLLSYLGRLRTIFFSTDDEKT-SQSFVESCFSKSQFLRVLNLRESALEV-----CPRKMG-N 142 (377)
Q Consensus 70 ~l~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~-----l~~~~~-~ 142 (377)
+++.|++.+..+....+.+.+..++++++|.+.+|.... ....+...+..+++|++|+|++|.+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 678999999999888778888999999999999997642 234556678999999999999998752 233333 2
Q ss_pred CCccceEeccCCCccc-----ccChhhcCCCcccEEeccCcccccc----Cc----------------------------
Q 017094 143 LKHMRYLDLSRNSKIK-----KLPKSICELQSLQTLDLEGCLELEE----LP---------------------------- 185 (377)
Q Consensus 143 l~~L~~L~l~~~~~~~-----~l~~~~~~l~~L~~L~l~~~~~~~~----~p---------------------------- 185 (377)
..+|++|++++|. ++ .++..+..+++|++|++++|..... +.
T Consensus 83 ~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
T d1z7xw1 83 SCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 161 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCCEEECCCCC-ccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccc
Confidence 3579999999874 43 2456677899999999998742110 00
Q ss_pred -hhhcccccccEeeecCcccccC----------------------------------cccCCCCCCCCEEEccCCCCchh
Q 017094 186 -KDIRYLVILRVFALTTKQKSLQ----------------------------------ESGIRSLGSLRCLTISGCRDLEH 230 (377)
Q Consensus 186 -~~l~~l~~L~~L~l~~~~~~~~----------------------------------~~~l~~l~~L~~L~l~~~~~~~~ 230 (377)
..+.....++.+.++++..... ...+...+.++.+.+.++.....
T Consensus 162 ~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~ 241 (460)
T d1z7xw1 162 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 241 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhcccccc
Confidence 0122334555565554432100 00111234566666665543221
Q ss_pred -----hHHhcccCcccchhccccCCCCc----------cCCCccceEEecccccccc----cchhhhhcCCCCccEEeec
Q 017094 231 -----LFEEIEQLSLLRTLLIHSYDDRK----------NTRPRLRRVFIKEITQLLE----LPQWLLQCCTDTLHTLVIG 291 (377)
Q Consensus 231 -----~~~~l~~l~~L~~L~l~~~~~~~----------~~~~~L~~L~l~~~~~~~~----l~~~~~~~~~~~L~~L~l~ 291 (377)
..........++.+++++|.... ...+.++.++++++..... +...+ ......|+.++++
T Consensus 242 ~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l-~~~~~~L~~l~l~ 320 (460)
T d1z7xw1 242 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETL-LEPGCQLESLWVK 320 (460)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHH-TSTTCCCCEEECT
T ss_pred ccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccc-ccccccccccccc
Confidence 11223345567777777765543 2345677777776643211 11111 1244678899988
Q ss_pred CCCCCCC----CCccCCCCccCceecccCcccCC----CCCcCC-CCCCCcCeeeccCCCCccccCCCCCCCCCCCCCcc
Q 017094 292 DCPNFMA----LPGSLKDLEALETLAIRGCPKLS----SLPEDM-HHLTTLKLLAIGGCPALSERCKPPTGEDWPKIAHI 362 (377)
Q Consensus 292 ~~~~~~~----l~~~~~~l~~L~~L~l~~~~~~~----~~~~~l-~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~~i~~~ 362 (377)
+|..... +...+...++|++|+|++|.... .++..+ ...+.|++|++++| .+++.............+.+
T Consensus 321 ~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L 399 (460)
T d1z7xw1 321 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC-DVSDSSCSSLAATLLANHSL 399 (460)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCCCC
T ss_pred ccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCC-CCChHHHHHHHHHHhcCCCC
Confidence 8753222 12223356789999999985322 233333 34678999999999 46553221111111223556
Q ss_pred ceEEeCCCccC
Q 017094 363 TQIELDDEIIK 373 (377)
Q Consensus 363 ~~~~~~~~~~~ 373 (377)
..+.+.++.|.
T Consensus 400 ~~L~Ls~N~i~ 410 (460)
T d1z7xw1 400 RELDLSNNCLG 410 (460)
T ss_dssp CEEECCSSSCC
T ss_pred CEEECCCCcCC
Confidence 77777777664
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00 E-value=1.3e-09 Score=85.21 Aligned_cols=105 Identities=14% Similarity=0.079 Sum_probs=86.2
Q ss_pred cccEEEeCCCccccCCcCcCCCCccceEeccCCCcccccCh-hhcCCCcccEEeccCccccccC-chhhcccccccEeee
Q 017094 122 FLRVLNLRESALEVCPRKMGNLKHMRYLDLSRNSKIKKLPK-SICELQSLQTLDLEGCLELEEL-PKDIRYLVILRVFAL 199 (377)
Q Consensus 122 ~L~~L~L~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~-p~~l~~l~~L~~L~l 199 (377)
....++.+++.+...|..+..+++|++|+++++..++.++. +|..+++|+.|++++| .+..+ |..+..+++|+.|++
T Consensus 9 ~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS-GLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS-CCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeecc-ccCCcccccccccccccceec
Confidence 44667888888888888888899999999986666777764 5788999999999987 45555 566889999999999
Q ss_pred cCcccccCcccCCCCCCCCEEEccCCCC
Q 017094 200 TTKQKSLQESGIRSLGSLRCLTISGCRD 227 (377)
Q Consensus 200 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 227 (377)
++|.++..+.......+|+.|++++|..
T Consensus 88 s~N~l~~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 88 SFNALESLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCC
T ss_pred cCCCCcccChhhhccccccccccCCCcc
Confidence 9999998877666666899999999875
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.63 E-value=3.1e-08 Score=77.16 Aligned_cols=108 Identities=18% Similarity=0.059 Sum_probs=83.8
Q ss_pred CCCccceEeccCCCcccccChhhcCCCcccEEeccCccccccCc-hhhcccccccEeeecCcccccCc-ccCCCCCCCCE
Q 017094 142 NLKHMRYLDLSRNSKIKKLPKSICELQSLQTLDLEGCLELEELP-KDIRYLVILRVFALTTKQKSLQE-SGIRSLGSLRC 219 (377)
Q Consensus 142 ~l~~L~~L~l~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~~~p-~~l~~l~~L~~L~l~~~~~~~~~-~~l~~l~~L~~ 219 (377)
.+.....++.++ ......|..+..+++|++|++.++..+..++ ..|..+++|+.|++++|.++.++ ..+..+++|++
T Consensus 6 ~c~~~~~l~c~~-~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTR-DGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCS-SCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecC-CCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 344556788775 4566778788889999999998776677775 45899999999999999998764 56889999999
Q ss_pred EEccCCCCchhhHHhcccCcccchhccccCCC
Q 017094 220 LTISGCRDLEHLFEEIEQLSLLRTLLIHSYDD 251 (377)
Q Consensus 220 L~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 251 (377)
|++++|+.. .++........|+.|++++|+.
T Consensus 85 L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 85 LNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115 (156)
T ss_dssp EECCSSCCS-CCCSTTTCSCCCCEEECCSSCC
T ss_pred eeccCCCCc-ccChhhhccccccccccCCCcc
Confidence 999998754 4554444445688888888765
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.68 E-value=6.8e-06 Score=63.89 Aligned_cols=87 Identities=17% Similarity=0.080 Sum_probs=55.7
Q ss_pred HHHHHHhhccCcccEEEeCCCccccCC---cCcCCCCccceEeccCCCcccccCh-hhcCCCcccEEeccCccccccCc-
Q 017094 111 SFVESCFSKSQFLRVLNLRESALEVCP---RKMGNLKHMRYLDLSRNSKIKKLPK-SICELQSLQTLDLEGCLELEELP- 185 (377)
Q Consensus 111 ~~~~~~~~~~~~L~~L~L~~~~~~~l~---~~~~~l~~L~~L~l~~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~~p- 185 (377)
..+......+++|++|+|++|.++.++ ..+..+++|++|++++| .++.++. ...+..+|++|++.+|.......
T Consensus 55 ~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~ 133 (162)
T d1koha1 55 ATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN-ELKSERELDKIKGLKLEELWLDGNSLSDTFRD 133 (162)
T ss_dssp HHHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS-CCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSS
T ss_pred hhhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccC-ccccchhhhhhhccccceeecCCCCcCcCccc
Confidence 334445667889999999999887653 34567788888888875 5565554 22234567888888774433221
Q ss_pred ------hhhcccccccEee
Q 017094 186 ------KDIRYLVILRVFA 198 (377)
Q Consensus 186 ------~~l~~l~~L~~L~ 198 (377)
..+..+|+|+.||
T Consensus 134 ~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 134 QSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHHHHTTSTTCCEET
T ss_pred chhHHHHHHHHCCCCCEEC
Confidence 2245566666664
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.65 E-value=3.4e-05 Score=60.07 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=23.4
Q ss_pred hcccCCceEEEeecC-Cch-hhHHHHHHHhhccCcccEEEeCCCccc
Q 017094 90 LSYLGRLRTIFFSTD-DEK-TSQSFVESCFSKSQFLRVLNLRESALE 134 (377)
Q Consensus 90 ~~~~~~L~~L~l~~~-~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~ 134 (377)
..+.+.|++|+++++ ... .....+...+...+.|++|++++|.+.
T Consensus 11 ~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~ 57 (167)
T d1pgva_ 11 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 57 (167)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred HhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccc
Confidence 344566777776653 222 112223334555566666666666554
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.55 E-value=4.9e-05 Score=59.13 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=35.9
Q ss_pred HHHHHhhccCcccEEEeCCC-ccc-----cCCcCcCCCCccceEeccCCCccc----ccChhhcCCCcccEEeccCc
Q 017094 112 FVESCFSKSQFLRVLNLRES-ALE-----VCPRKMGNLKHMRYLDLSRNSKIK----KLPKSICELQSLQTLDLEGC 178 (377)
Q Consensus 112 ~~~~~~~~~~~L~~L~L~~~-~~~-----~l~~~~~~l~~L~~L~l~~~~~~~----~l~~~~~~l~~L~~L~l~~~ 178 (377)
.+.......+.|+.|+|+++ .+. .+...+...++|++|++++|.... .+...+...+.|++|++++|
T Consensus 6 ~l~~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n 82 (167)
T d1pgva_ 6 CINRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESN 82 (167)
T ss_dssp HHHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSS
T ss_pred HHHHHHhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehh
Confidence 34444555677888888764 343 223345555667777776553221 22233344556666666665
No 40
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.49 E-value=8.6e-06 Score=63.27 Aligned_cols=87 Identities=18% Similarity=0.098 Sum_probs=62.4
Q ss_pred hhhhcccCCceEEEeecCCchhhHHHHHHHhhccCcccEEEeCCCccccCCc-CcCCCCccceEeccCCCcccccC----
Q 017094 87 SSLLSYLGRLRTIFFSTDDEKTSQSFVESCFSKSQFLRVLNLRESALEVCPR-KMGNLKHMRYLDLSRNSKIKKLP---- 161 (377)
Q Consensus 87 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~L~~~~~~~l~~-~~~~l~~L~~L~l~~~~~~~~l~---- 161 (377)
...+..+++|++|++++|..... ..+...+..+++|+.|++++|.++.++. ......+|+.|++++|.......
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l-~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~ 136 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRL-DDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCC-SGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCC-chhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchh
Confidence 34556899999999999976432 2334557889999999999999987764 22234579999999875433222
Q ss_pred ---hhhcCCCcccEEe
Q 017094 162 ---KSICELQSLQTLD 174 (377)
Q Consensus 162 ---~~~~~l~~L~~L~ 174 (377)
..+..+|+|+.||
T Consensus 137 y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 137 YISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHTTSTTCCEET
T ss_pred HHHHHHHHCCCCCEEC
Confidence 2355789999986
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.27 E-value=0.00016 Score=55.99 Aligned_cols=43 Identities=2% Similarity=0.061 Sum_probs=19.2
Q ss_pred cccCCceEEEeecC-Cch-hhHHHHHHHhhccCcccEEEeCCCcc
Q 017094 91 SYLGRLRTIFFSTD-DEK-TSQSFVESCFSKSQFLRVLNLRESAL 133 (377)
Q Consensus 91 ~~~~~L~~L~l~~~-~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~ 133 (377)
.+.+.|+.|.+++. ..+ .....+...+..+++|+.|++++|.+
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l 58 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRS 58 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCC
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcc
Confidence 34455555555542 121 11222333344555555555555544
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.07 E-value=0.00041 Score=53.52 Aligned_cols=110 Identities=7% Similarity=0.065 Sum_probs=76.3
Q ss_pred CCCcEEEEEec-ccccc---chhhhhcccCCceEEEeecCCch-hhHHHHHHHhhccCcccEEEeCCCccc-----cCCc
Q 017094 69 KRVRHLSFAAA-NALRN---DFSSLLSYLGRLRTIFFSTDDEK-TSQSFVESCFSKSQFLRVLNLRESALE-----VCPR 138 (377)
Q Consensus 69 ~~l~~L~l~~~-~~~~~---~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~-----~l~~ 138 (377)
+.+++|.+.+. .+... .+..++...++|++|++++|..+ .....+...+...+.++.++++++.+. .+..
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 58999999863 44443 24556778899999999999765 334445567788899999999998865 3445
Q ss_pred CcCCCCccceEeccCCC-ccc-----ccChhhcCCCcccEEeccCc
Q 017094 139 KMGNLKHMRYLDLSRNS-KIK-----KLPKSICELQSLQTLDLEGC 178 (377)
Q Consensus 139 ~~~~l~~L~~L~l~~~~-~~~-----~l~~~~~~l~~L~~L~l~~~ 178 (377)
.+...++|+.++++.+. .++ .+...+.+.++|+.|++..+
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 66777888877765321 222 24445566778888887654
Done!