BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017096
MASTHAHQNLRPIAASGLTSHQLSTTRPVRLYFPPRSFKSRSIAVKTNQNLKWAVRLSLV
DQSSPPQSTVDVEWLVGFLYDDLPHLFDDQGIDRTAYDEQVKFRDPITKHDTISGYLFNI
SMLKMVFRPAFQLHWVKQTGPYEITTRWTMVMKFMPLPWKPELVFTGTSVMGINPETGKF
CSHLDLWDSIKNNDYFSLEGFLDVLKQLRIYKTPDLETPKYQILKRTANYEVRRYSPFIV
VETNGDKLSGSTGFNDVAGYIFGKNSKTEKIPMTTPVFTQAYDNELKKVSIQIVLPQDKD
MSRKVEGGIAAVLKFSGKPTEDIVHEKEKELHTSLIRDGLRPKIGCLLARYNDPGQTWSF
IMRNEVLIWLEEFSLDS

High Scoring Gene Products

Symbol, full name Information P value
AT3G10130 protein from Arabidopsis thaliana 2.1e-09
SOUL-1 protein from Arabidopsis thaliana 1.2e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017096
        (377 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100043 - symbol:AT3G10130 "AT3G10130" species...   162  2.1e-09   1
TAIR|locus:2065578 - symbol:SOUL-1 species:3702 "Arabidop...   134  1.2e-06   1


>TAIR|locus:2100043 [details] [associations]
            symbol:AT3G10130 "AT3G10130" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
            membrane" evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA]
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009535 GO:GO:0010287
            EMBL:AC010927 EMBL:AY099746 EMBL:BT026078 EMBL:BT020479
            IPI:IPI00527808 RefSeq:NP_187624.1 UniGene:At.28203
            ProteinModelPortal:Q9SR77 SMR:Q9SR77 PaxDb:Q9SR77 PRIDE:Q9SR77
            EnsemblPlants:AT3G10130.1 GeneID:820176 KEGG:ath:AT3G10130
            TAIR:At3g10130 eggNOG:NOG86107 HOGENOM:HOG000240036
            InParanoid:Q9SR77 OMA:QYNPPFT PhylomeDB:Q9SR77
            ProtClustDB:CLSN2683999 Genevestigator:Q9SR77 InterPro:IPR011256
            InterPro:IPR006917 PANTHER:PTHR11220 Pfam:PF04832 SUPFAM:SSF55136
            Uniprot:Q9SR77
        Length = 309

 Score = 162 (62.1 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 37/98 (37%), Positives = 57/98 (58%)

Query:   214 PDLETPKYQILKRTANYEVRRYSPFIVVET-----NG-DKLSGSTGFNDVAGYIFGKNSK 267
             PDLET  +++L RT  YE+R+  P+ V ET      G D    S  FN +A Y+FGKN+ 
Sbjct:   112 PDLETMNFRVLFRTDKYEIRQVEPYFVAETIMPGETGFDSYGASKSFNVLAEYLFGKNTI 171

Query:   268 TEKIPMTTPVFTQAYDN--ELKKVSIQIVLPQDKDMSR 303
              EK+ MTTPV T+   +  E  +++  ++  + KD ++
Sbjct:   172 KEKMEMTTPVVTRKVQSVGEKMEMTTPVITSKAKDQNQ 209

 Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
 Identities = 41/116 (35%), Positives = 62/116 (53%)

Query:   269 EKIPMTTPVFT-QAYDNELKKVSIQIV------LPQDKDMSRKVEG---GIAAVLKFSGK 318
             EK+ MTTPV T +A D    ++S  +       LP  KD S K++     I AV+ FSG 
Sbjct:   191 EKMEMTTPVITSKAKDQNQWRMSFVMPSKYGSNLPLPKDPSVKIQQVPRKIVAVVAFSGY 250

Query:   319 PTEDIVHEKEKELHTSLIRDG---LRPKIGCLLARYNDPGQTWSFIMRNEVLIWLE 371
              T++ +  +E+EL  +L  D    +R  +   +A+YN P  T  F+ RNEV + +E
Sbjct:   251 VTDEEIERRERELRRALQNDKKFRVRDGVSFEVAQYNPPF-TLPFMRRNEVSLEVE 305


>TAIR|locus:2065578 [details] [associations]
            symbol:SOUL-1 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0010017 "red
            or far-red light signaling pathway" evidence=IMP] [GO:0005829
            "cytosol" evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0009744 "response to sucrose stimulus" evidence=RCA]
            [GO:0009813 "flavonoid biosynthetic process" evidence=RCA]
            [GO:0010224 "response to UV-B" evidence=RCA] GO:GO:0005886
            GO:GO:0005794 GO:GO:0005773 EMBL:CP002685 GO:GO:0010017
            InterPro:IPR011256 InterPro:IPR006917 PANTHER:PTHR11220
            Pfam:PF04832 SUPFAM:SSF55136 IPI:IPI00539344 RefSeq:NP_565876.2
            UniGene:At.24015 UniGene:At.66364 ProteinModelPortal:F4IRX7
            SMR:F4IRX7 PRIDE:F4IRX7 EnsemblPlants:AT2G37970.1 GeneID:818374
            KEGG:ath:AT2G37970 OMA:KPEKIAM Uniprot:F4IRX7
        Length = 225

 Score = 134 (52.2 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 45/120 (37%), Positives = 65/120 (54%)

Query:   267 KTEKIPMTTPVFTQAYDNELKK--VSIQIVLPQ------------DKDMSRKVEGGIA-A 311
             ++EKI MT+PV T+    E +K  V++Q +LP             D+ +  K EGG    
Sbjct:   107 ESEKIEMTSPVVTKEGGGEGRKKLVTMQFLLPSMYKKAEEAPRPTDERVVIKEEGGRKYG 166

Query:   312 VLKFSGKPTEDIVHEKEKELHTSLIRDGLRPKIGCLLARYNDPGQTWSFIMRNEVLIWLE 371
             V+KFSG  +E +V EK K+L + L +DG +     +LARYN P     F   NEV+I +E
Sbjct:   167 VIKFSGIASESVVSEKVKKLSSHLEKDGFKITGDFVLARYNPPWTLPPF-RTNEVMIPVE 225

 Score = 127 (49.8 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 41/110 (37%), Positives = 53/110 (48%)

Query:   216 LETPKYQILKRTANYEVRRYSPFIVVETNGD--KLSGST--GFNDVAGYI--FGK--NSK 267
             +ETPKY + K    YE+R Y P +  E   D  +  G    GF  +A YI  FGK  N K
Sbjct:    20 VETPKYTVTKSGDGYEIREYPPAVAAEVTYDASEFKGDKDGGFQLLAKYIGVFGKPENEK 79

Query:   268 TEKIPMTTPVFTQAYDNELKKVSIQIVLPQDKDMSRKVEGGIAAVLKFSG 317
              EKI MT PV T+    E +K+++    P     S K+E     V K  G
Sbjct:    80 PEKIAMTAPVITK----EGEKIAM--TAPVITKESEKIEMTSPVVTKEGG 123


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      377       377   0.00089  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  266 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.83u 0.06s 30.89t   Elapsed:  00:00:01
  Total cpu time:  30.83u 0.06s 30.89t   Elapsed:  00:00:01
  Start:  Tue May 21 03:53:28 2013   End:  Tue May 21 03:53:29 2013

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