BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017101
(377 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224117100|ref|XP_002317476.1| predicted protein [Populus trichocarpa]
gi|222860541|gb|EEE98088.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 281/383 (73%), Positives = 310/383 (80%), Gaps = 17/383 (4%)
Query: 1 MKGISLSPSNHCQLKFQNILAKQLNKPINTIPFHFTITNRQ--------FPAHVIKCQCQ 52
MK +S SP+NHC LK Q KQ P P HF Q FP+ IK
Sbjct: 1 MKAVSFSPANHCNLKLQKYPIKQ---PTLANPIHFNNHQNQKPSNKKHHFPSFSIKAS-- 55
Query: 53 RRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAA 112
+ Q P+ K P NTPP LVVVGSAN DIYVEIDRLP GET++AKT QTLAGGKGANQAA
Sbjct: 56 KTPQTPLTKYP-NTPP-LVVVGSANADIYVEIDRLPAEGETISAKTGQTLAGGKGANQAA 113
Query: 113 CGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ 172
CGAKLS+PTYFVGQVGEDA+GKLIT+AL GV LD + + D VPTGHAVVMLQ DGQ
Sbjct: 114 CGAKLSYPTYFVGQVGEDAHGKLITEALKNGGVNLDCVRNLSD--VPTGHAVVMLQPDGQ 171
Query: 173 NSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
NSIIIVGG NMSCWPEK DEDLEVV+KAG+VLLQREIPD VNIQVAKAA+SAGVPVI D
Sbjct: 172 NSIIIVGGANMSCWPEKLSDEDLEVVRKAGVVLLQREIPDLVNIQVAKAAKSAGVPVILD 231
Query: 233 AGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLG 292
AGGMDAP+P ELLN +DI SPNESEL RLT M T+S+EQI +AVVKCHKMGV+QVLVKLG
Sbjct: 232 AGGMDAPMPPELLNVVDIFSPNESELARLTCMSTESFEQIGQAVVKCHKMGVKQVLVKLG 291
Query: 293 AKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
AKGSALF+EGEKPIKQ+II AARV+DTTGAGDTFTA+FAV VEGK++EEC+RFAAAAAS
Sbjct: 292 AKGSALFIEGEKPIKQTIISAARVLDTTGAGDTFTAAFAVALVEGKTKEECMRFAAAAAS 351
Query: 353 LCVQVKGAIPSMPDRKSVLNLLQ 375
LCVQVKGAIPSMPDR SVL+LLQ
Sbjct: 352 LCVQVKGAIPSMPDRTSVLHLLQ 374
>gi|255577273|ref|XP_002529518.1| ribokinase, putative [Ricinus communis]
gi|223531002|gb|EEF32856.1| ribokinase, putative [Ricinus communis]
Length = 389
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 275/390 (70%), Positives = 308/390 (78%), Gaps = 27/390 (6%)
Query: 1 MKGISLSPSNHCQL-KFQNILAKQLNKPINTIPFHF------------TITNRQFPAHVI 47
MKGI+ SP+NHC L K QN+ KQ +N+ P F T TN QFP+
Sbjct: 1 MKGIAFSPANHCFLTKSQNLTNKQ---SVNSNPIQFINHQTQKTQNPLTRTN-QFPSVAT 56
Query: 48 KCQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKG 107
K +NP+ PINTPP LVVVGSAN DIYVEIDRLPK GETV+AK QTLAGGKG
Sbjct: 57 KS-----SKNPL--GPINTPP-LVVVGSANADIYVEIDRLPKEGETVSAKNGQTLAGGKG 108
Query: 108 ANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML 167
ANQAACG KLS+PTYF+GQVGED NGKLITDAL GV LDY+ V D VPTGHAVVML
Sbjct: 109 ANQAACGGKLSYPTYFLGQVGEDVNGKLITDALKNRGVHLDYVRYVGD--VPTGHAVVML 166
Query: 168 QSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGV 227
QSDGQNSIIIVGG NM+ WPE DEDL +VK AGI+LLQREIPD +NIQVAKAA+ AGV
Sbjct: 167 QSDGQNSIIIVGGANMNSWPEMLSDEDLMIVKNAGIILLQREIPDDINIQVAKAAKQAGV 226
Query: 228 PVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQV 287
PVIFDAGGMDAPIP ELL F+DI SPNE+EL R+TGMPT++ EQI +AV KCH+MGV+QV
Sbjct: 227 PVIFDAGGMDAPIPSELLKFVDIFSPNETELARITGMPTENVEQIGQAVKKCHEMGVRQV 286
Query: 288 LVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFA 347
LVKLGA+GSALF EG+KPI Q II A RV+DTTGAGDTFTA+FAV VEG ++EEC+RFA
Sbjct: 287 LVKLGAQGSALFEEGKKPIIQPIISAERVLDTTGAGDTFTAAFAVALVEGNTKEECMRFA 346
Query: 348 AAAASLCVQVKGAIPSMPDRKSVLNLLQYA 377
AAAASLCVQVKGAIPSMPDR SVL+LLQ A
Sbjct: 347 AAAASLCVQVKGAIPSMPDRTSVLDLLQAA 376
>gi|15220039|ref|NP_173159.1| ribokinase [Arabidopsis thaliana]
gi|119360041|gb|ABL66749.1| At1g17160 [Arabidopsis thaliana]
gi|332191431|gb|AEE29552.1| ribokinase [Arabidopsis thaliana]
Length = 379
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/324 (76%), Positives = 283/324 (87%), Gaps = 5/324 (1%)
Query: 57 NPVPKNPINT-PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGA 115
N PK+ ++ PPLVVVGSAN DIYVEI+RLPK GET++AKT QTLAGGKGANQAACGA
Sbjct: 57 NRNPKSAVDAHAPPLVVVGSANADIYVEIERLPKEGETISAKTGQTLAGGKGANQAACGA 116
Query: 116 KLSHPTYFVGQVGEDANGKLITDAL--SGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQN 173
KL +PTYFVG++GEDA+GKLI +AL GCGV LDY+ V + PTGHAVVMLQSDGQN
Sbjct: 117 KLMYPTYFVGRLGEDAHGKLIAEALGDDGCGVHLDYVRSVNNE--PTGHAVVMLQSDGQN 174
Query: 174 SIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDA 233
SIIIVGG NM WPE D+DLE+V+ AGIVLLQREIPDS+NIQVAKA + AGVPVI D
Sbjct: 175 SIIIVGGANMKAWPEIMSDDDLEIVRNAGIVLLQREIPDSINIQVAKAVKKAGVPVILDV 234
Query: 234 GGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGA 293
GGMD PIP ELL+ IDILSPNE+EL RLTGMPT+++EQIS+AV KCHK+GV+QVLVKLG+
Sbjct: 235 GGMDTPIPNELLDSIDILSPNETELSRLTGMPTETFEQISQAVAKCHKLGVKQVLVKLGS 294
Query: 294 KGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASL 353
KGSALF++GEKPI+QSIIPAA+V+DTTGAGDTFTA+FAV VEGKS EECLRFAAAAASL
Sbjct: 295 KGSALFIQGEKPIQQSIIPAAQVVDTTGAGDTFTAAFAVAMVEGKSHEECLRFAAAAASL 354
Query: 354 CVQVKGAIPSMPDRKSVLNLLQYA 377
CVQVKGAIPSMPDRKSVL LL+++
Sbjct: 355 CVQVKGAIPSMPDRKSVLKLLKFS 378
>gi|5734752|gb|AAD50017.1|AC007651_12 Similar to ribokinase [Arabidopsis thaliana]
Length = 378
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/324 (76%), Positives = 283/324 (87%), Gaps = 5/324 (1%)
Query: 57 NPVPKNPINT-PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGA 115
N PK+ ++ PPLVVVGSAN DIYVEI+RLPK GET++AKT QTLAGGKGANQAACGA
Sbjct: 56 NRNPKSAVDAHAPPLVVVGSANADIYVEIERLPKEGETISAKTGQTLAGGKGANQAACGA 115
Query: 116 KLSHPTYFVGQVGEDANGKLITDAL--SGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQN 173
KL +PTYFVG++GEDA+GKLI +AL GCGV LDY+ V + PTGHAVVMLQSDGQN
Sbjct: 116 KLMYPTYFVGRLGEDAHGKLIAEALGDDGCGVHLDYVRSVNNE--PTGHAVVMLQSDGQN 173
Query: 174 SIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDA 233
SIIIVGG NM WPE D+DLE+V+ AGIVLLQREIPDS+NIQVAKA + AGVPVI D
Sbjct: 174 SIIIVGGANMKAWPEIMSDDDLEIVRNAGIVLLQREIPDSINIQVAKAVKKAGVPVILDV 233
Query: 234 GGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGA 293
GGMD PIP ELL+ IDILSPNE+EL RLTGMPT+++EQIS+AV KCHK+GV+QVLVKLG+
Sbjct: 234 GGMDTPIPNELLDSIDILSPNETELSRLTGMPTETFEQISQAVAKCHKLGVKQVLVKLGS 293
Query: 294 KGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASL 353
KGSALF++GEKPI+QSIIPAA+V+DTTGAGDTFTA+FAV VEGKS EECLRFAAAAASL
Sbjct: 294 KGSALFIQGEKPIQQSIIPAAQVVDTTGAGDTFTAAFAVAMVEGKSHEECLRFAAAAASL 353
Query: 354 CVQVKGAIPSMPDRKSVLNLLQYA 377
CVQVKGAIPSMPDRKSVL LL+++
Sbjct: 354 CVQVKGAIPSMPDRKSVLKLLKFS 377
>gi|297850114|ref|XP_002892938.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338780|gb|EFH69197.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 380
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/383 (68%), Positives = 303/383 (79%), Gaps = 18/383 (4%)
Query: 2 KGISLSPSNHCQLKFQ-NILAKQLNKP---INTIPFHFTIT--NRQFPAHVIKCQCQRRD 55
KGISLS S + F NI + N+P INT+ + T + +R ++ D
Sbjct: 4 KGISLSQS----INFNPNI---EFNRPQLQINTVNPNLTQSRFSRPLSRRSLRVLSLAVD 56
Query: 56 QNPVPKNPINTP--PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAAC 113
+P + PPLVVVGSAN DIYVEI+RLPK GET++AKT QTLAGGKGANQAAC
Sbjct: 57 VDPSANRNAKSANAPPLVVVGSANADIYVEIERLPKEGETISAKTGQTLAGGKGANQAAC 116
Query: 114 GAKLSHPTYFVGQVGEDANGKLITDAL-SGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ 172
GAKL +PTYFVG++GEDA+GKLI +AL GCGV LDY+ V D PTGHAVVMLQSDGQ
Sbjct: 117 GAKLLYPTYFVGRLGEDAHGKLIAEALGDGCGVHLDYVRSVNDE--PTGHAVVMLQSDGQ 174
Query: 173 NSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
NSIIIVGG NM WPEK D+DLE+V+ AGIVLLQREIPDS+NIQVAKA + AGVPVI D
Sbjct: 175 NSIIIVGGANMKAWPEKMTDDDLEIVRNAGIVLLQREIPDSINIQVAKAVKKAGVPVILD 234
Query: 233 AGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLG 292
GGMD PIP ELL+ +DILSPNE+EL RLTGMPT+++EQIS+AV KCHK+GV+QVLVKLG
Sbjct: 235 VGGMDTPIPNELLDSVDILSPNETELSRLTGMPTETFEQISQAVAKCHKLGVKQVLVKLG 294
Query: 293 AKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
+KGSALF+EGEKPI+QSII AA+VIDTTGAGDTFTA+FAV VEGK EECLRFAAAAAS
Sbjct: 295 SKGSALFIEGEKPIQQSIIAAAQVIDTTGAGDTFTAAFAVAMVEGKPHEECLRFAAAAAS 354
Query: 353 LCVQVKGAIPSMPDRKSVLNLLQ 375
LCVQVKGAIPSMPDR SVL LL+
Sbjct: 355 LCVQVKGAIPSMPDRTSVLKLLK 377
>gi|225461828|ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera]
Length = 371
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/383 (67%), Positives = 298/383 (77%), Gaps = 25/383 (6%)
Query: 4 ISLSPSNHCQLKFQNILAKQLNKPINTIPFHFTITNRQFPAHVIKCQCQRRDQNPVPKNP 63
++LS S H LN + T P H+I+ + ++P P
Sbjct: 1 MALSSSKHWPFSPTQ---DSLNGSLRTTPVQL---------HLIRNPSPSQSRSPFPSLS 48
Query: 64 IN-----------TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAA 112
+N T PPLVVVGSAN DIYVEIDRLPK GETV+AK QTLAGGKGANQAA
Sbjct: 49 LNASKAPSPQTQVTGPPLVVVGSANADIYVEIDRLPKEGETVSAKHGQTLAGGKGANQAA 108
Query: 113 CGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ 172
CG KLS+PTYFVGQVGEDA+GKLI++AL GV LD+++ V PTGHAVVMLQSDGQ
Sbjct: 109 CGGKLSYPTYFVGQVGEDAHGKLISEALKDGGVCLDHLSTVS--AAPTGHAVVMLQSDGQ 166
Query: 173 NSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
NSIIIVGG NMS WP+ DEDL++V+ AGIVLLQREIPD VNIQVAKAAR AGVPVI D
Sbjct: 167 NSIIIVGGANMSFWPDTLSDEDLKIVRNAGIVLLQREIPDFVNIQVAKAARDAGVPVILD 226
Query: 233 AGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLG 292
AGGMDAPIP ELLN +DILSPNESEL RLT MPT+S+EQIS+AV KCH+MGV++VLVKLG
Sbjct: 227 AGGMDAPIPVELLNVVDILSPNESELARLTRMPTESFEQISQAVAKCHEMGVKEVLVKLG 286
Query: 293 AKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
KGSALFV+GE+PI+Q II AA+V+DTTGAGDTFTA+FAV FVEG+S++ECLRFAAAAAS
Sbjct: 287 EKGSALFVKGEEPIRQPIIYAAKVLDTTGAGDTFTAAFAVAFVEGRSKKECLRFAAAAAS 346
Query: 353 LCVQVKGAIPSMPDRKSVLNLLQ 375
LCVQVKGAIPSMPDR+SVL+LLQ
Sbjct: 347 LCVQVKGAIPSMPDRRSVLDLLQ 369
>gi|147833687|emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera]
Length = 370
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/342 (73%), Positives = 287/342 (83%), Gaps = 13/342 (3%)
Query: 45 HVIKCQCQRRDQNPVPKNPIN-----------TPPPLVVVGSANFDIYVEIDRLPKVGET 93
H+I+ + ++P P +N T PPLVVVGSAN DIYVEIDRLPK GET
Sbjct: 29 HLIRNPSPSQSRSPFPSLSLNASKAPSPQTQVTGPPLVVVGSANADIYVEIDRLPKEGET 88
Query: 94 VAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVV 153
V+AK QTLAGGKGANQAACG KLS+PTYFVGQVGEDA+GKLI++AL GV LD+++ V
Sbjct: 89 VSAKHGQTLAGGKGANQAACGGKLSYPTYFVGQVGEDAHGKLISEALKDGGVCLDHLSTV 148
Query: 154 KDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDS 213
PTGHAVVMLQSDGQNSIIIVGG NMS WP+ DEDL++V+ AGIVLLQREIPD
Sbjct: 149 S--AAPTGHAVVMLQSDGQNSIIIVGGANMSFWPDTLSDEDLKIVRNAGIVLLQREIPDF 206
Query: 214 VNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQIS 273
VNIQVAKAAR AGVPVI DAGGMDAPIP ELLN +DILSPNESEL RLT MPT+S+EQIS
Sbjct: 207 VNIQVAKAARDAGVPVILDAGGMDAPIPVELLNVVDILSPNESELARLTRMPTESFEQIS 266
Query: 274 EAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVG 333
+AV KCH+MGV++VLVKLG KGSALFV+GE+PI+Q II AA+V+DTTGAGDTFTA+FAV
Sbjct: 267 QAVAKCHEMGVKEVLVKLGEKGSALFVKGEEPIRQPIISAAKVLDTTGAGDTFTAAFAVA 326
Query: 334 FVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
FVEG+S++ECLRFAAAAASLCVQVKGAIPSMPDR+SVL+LLQ
Sbjct: 327 FVEGRSKKECLRFAAAAASLCVQVKGAIPSMPDRRSVLDLLQ 368
>gi|388498018|gb|AFK37075.1| unknown [Medicago truncatula]
Length = 360
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/361 (68%), Positives = 293/361 (81%), Gaps = 10/361 (2%)
Query: 24 LNKPINTIPFHFTITNR-----QFPAHVIKCQCQRRDQNPVPK---NPINTPPPLVVVGS 75
+N+ + P H+ +TN+ + P ++ + + PV + NP + PP+VVVGS
Sbjct: 1 MNQTTLSSPHHYHLTNQPNTNTKNPTQFLRFRQNDKQNLPVLRFAVNPSSQVPPVVVVGS 60
Query: 76 ANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKL 135
AN DIYVEIDRLPK GET++AK+ QTLAGGKGANQA CGAKLSHPTYF+GQVG DA+G L
Sbjct: 61 ANADIYVEIDRLPKEGETISAKSGQTLAGGKGANQACCGAKLSHPTYFLGQVGNDAHGNL 120
Query: 136 ITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDL 195
+ DAL GVRLDY+ VV PTGHAVVMLQS GQNSI+IVGG N+SCWP+ + L
Sbjct: 121 VADALRDGGVRLDYLAVVSSA--PTGHAVVMLQSSGQNSIVIVGGANVSCWPQTLPPKQL 178
Query: 196 EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNE 255
EVV AGIVLLQREIPD VN+QVAKAA+S GVPVIFDAGGMDAPIPQELL+F+DI SPNE
Sbjct: 179 EVVSSAGIVLLQREIPDFVNVQVAKAAKSVGVPVIFDAGGMDAPIPQELLDFVDIFSPNE 238
Query: 256 SELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAAR 315
SELGRLTG+PT+S+E+I++A KCHK+GV+QVLVKLGAKGSALF++GE+PI+Q I A
Sbjct: 239 SELGRLTGLPTESFEEITQAAAKCHKLGVKQVLVKLGAKGSALFIDGEEPIQQPAIFAKT 298
Query: 316 VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
VIDTTGAGDTFTA+FAV VEGKS++ECLRFAAAAASLCVQVKGAIPSMPDRKSVL LL
Sbjct: 299 VIDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAASLCVQVKGAIPSMPDRKSVLELLN 358
Query: 376 Y 376
+
Sbjct: 359 H 359
>gi|449438937|ref|XP_004137244.1| PREDICTED: ribokinase-like [Cucumis sativus]
Length = 370
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/344 (71%), Positives = 277/344 (80%), Gaps = 24/344 (6%)
Query: 54 RDQNPVPKNPINTPPPL----------------------VVVGSANFDIYVEIDRLPKVG 91
R Q P+NP N+ PP+ VVVGSAN DIYVEIDRLP+ G
Sbjct: 27 RIQFTSPQNPFNSRPPVPRFSIDSSKSPTPVIPVEPPPLVVVGSANADIYVEIDRLPEEG 86
Query: 92 ETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMN 151
ET++AK+ QTLAGGKGANQA CG KL +PTYFVGQVG+DA+GKLIT AL GVRLD++
Sbjct: 87 ETISAKSGQTLAGGKGANQACCGGKLEYPTYFVGQVGKDAHGKLITAALEDGGVRLDHLA 146
Query: 152 VVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIP 211
V PTGHAVVMLQS GQNSIIIVGG NM+CWP+ D DLEV++ AGIVLLQREIP
Sbjct: 147 TV--AAAPTGHAVVMLQSGGQNSIIIVGGANMNCWPDALSDSDLEVIRNAGIVLLQREIP 204
Query: 212 DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQ 271
DSVNIQVAKAARSAGVPVI DAGG+DAPIPQELL+ +DI SPNESEL RLTG PT+S+EQ
Sbjct: 205 DSVNIQVAKAARSAGVPVILDAGGVDAPIPQELLDHVDIFSPNESELSRLTGCPTESFEQ 264
Query: 272 ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFA 331
I +AV KC+KMGV+QVLVKLG KGSA F +GEKPI+QSII AA V+DTTGAGDTFTASFA
Sbjct: 265 IGQAVEKCYKMGVKQVLVKLGDKGSAFFTQGEKPIRQSIISAAEVLDTTGAGDTFTASFA 324
Query: 332 VGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
V VEGKS+EECL+FAAAAASLCVQVKGAIPSMPDR+SV NLLQ
Sbjct: 325 VALVEGKSKEECLKFAAAAASLCVQVKGAIPSMPDRESVRNLLQ 368
>gi|449483140|ref|XP_004156504.1| PREDICTED: LOW QUALITY PROTEIN: ribokinase-like [Cucumis sativus]
Length = 370
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/344 (71%), Positives = 277/344 (80%), Gaps = 24/344 (6%)
Query: 54 RDQNPVPKNPINTPPPL----------------------VVVGSANFDIYVEIDRLPKVG 91
R Q P+NP N+ PP+ VVVGSAN DIYVEIDRLP+ G
Sbjct: 27 RIQFTSPQNPFNSRPPVPRFSIDSSKSPTPVIPVEPPPLVVVGSANADIYVEIDRLPEEG 86
Query: 92 ETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMN 151
ET++AK+ QTLAGGKGANQA CG KL +PTYFVGQVG+DA+GKLIT AL GVRLD++
Sbjct: 87 ETISAKSGQTLAGGKGANQACCGGKLEYPTYFVGQVGKDAHGKLITAALEDGGVRLDHLA 146
Query: 152 VVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIP 211
V PTGHAVVMLQS GQNSIIIVGG NM+CWP+ D DLEV++ AGIVLLQREIP
Sbjct: 147 TV--AAAPTGHAVVMLQSGGQNSIIIVGGANMNCWPDALSDSDLEVIRNAGIVLLQREIP 204
Query: 212 DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQ 271
DSVNIQVAKAARSAGVPVI DAGG+DAPIPQELL+ +DI SPNESEL RLTG PT+S+EQ
Sbjct: 205 DSVNIQVAKAARSAGVPVILDAGGVDAPIPQELLDHVDIFSPNESELSRLTGCPTESFEQ 264
Query: 272 ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFA 331
I +AV KC+KMGV+QVLVKLG KGSA F +GEKPI+QSII AA V+DTTGAGDTFTASFA
Sbjct: 265 IGQAVEKCYKMGVKQVLVKLGDKGSAXFTQGEKPIRQSIISAAEVLDTTGAGDTFTASFA 324
Query: 332 VGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
V VEGKS+EECL+FAAAAASLCVQVKGAIPSMPDR+SV NLLQ
Sbjct: 325 VALVEGKSKEECLKFAAAAASLCVQVKGAIPSMPDRESVRNLLQ 368
>gi|356556858|ref|XP_003546737.1| PREDICTED: ribokinase-like isoform 1 [Glycine max]
gi|356556860|ref|XP_003546738.1| PREDICTED: ribokinase-like isoform 2 [Glycine max]
Length = 363
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/314 (72%), Positives = 266/314 (84%), Gaps = 2/314 (0%)
Query: 61 KNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP 120
NP PP+VVVGSAN DIYVEIDRLP+ GET+AAK+ QTLAGGKGANQA C A LS+P
Sbjct: 49 SNPSQQLPPVVVVGSANADIYVEIDRLPREGETLAAKSGQTLAGGKGANQATCSAMLSYP 108
Query: 121 TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180
TYFVGQVG+DA G L++DAL G GVRLD + VV PTGHAVVMLQS+GQNSIII+GG
Sbjct: 109 TYFVGQVGDDAYGTLLSDALRGGGVRLDSLTVVASA--PTGHAVVMLQSNGQNSIIIIGG 166
Query: 181 TNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI 240
NMSCWP + L++V +AGIVLLQREIPD+VN+QVA+AAR+AGVPV+ DAGGMD PI
Sbjct: 167 ANMSCWPSTLPRQHLDLVAQAGIVLLQREIPDAVNVQVAQAARNAGVPVVMDAGGMDGPI 226
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
P +LL F+DILSPNE+EL RLTG PT S+E+I++A +KCH++GV+QVLVKLG KGSALFV
Sbjct: 227 PPQLLKFVDILSPNETELARLTGRPTGSFEEIAQAALKCHELGVKQVLVKLGEKGSALFV 286
Query: 301 EGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
EGEKPI+Q I A V+DTTGAGDTFTA+FAV VEGKS++ECLRFAAAAA LCVQVKGA
Sbjct: 287 EGEKPIQQPAILAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAACLCVQVKGA 346
Query: 361 IPSMPDRKSVLNLL 374
PSMPDRKSVL+LL
Sbjct: 347 SPSMPDRKSVLDLL 360
>gi|145323924|ref|NP_001077551.1| ribokinase [Arabidopsis thaliana]
gi|332191432|gb|AEE29553.1| ribokinase [Arabidopsis thaliana]
Length = 355
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/294 (75%), Positives = 254/294 (86%), Gaps = 5/294 (1%)
Query: 57 NPVPKNPINT-PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGA 115
N PK+ ++ PPLVVVGSAN DIYVEI+RLPK GET++AKT QTLAGGKGANQAACGA
Sbjct: 57 NRNPKSAVDAHAPPLVVVGSANADIYVEIERLPKEGETISAKTGQTLAGGKGANQAACGA 116
Query: 116 KLSHPTYFVGQVGEDANGKLITDAL--SGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQN 173
KL +PTYFVG++GEDA+GKLI +AL GCGV LDY+ V + PTGHAVVMLQSDGQN
Sbjct: 117 KLMYPTYFVGRLGEDAHGKLIAEALGDDGCGVHLDYVRSVNNE--PTGHAVVMLQSDGQN 174
Query: 174 SIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDA 233
SIIIVGG NM WPE D+DLE+V+ AGIVLLQREIPDS+NIQVAKA + AGVPVI D
Sbjct: 175 SIIIVGGANMKAWPEIMSDDDLEIVRNAGIVLLQREIPDSINIQVAKAVKKAGVPVILDV 234
Query: 234 GGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGA 293
GGMD PIP ELL+ IDILSPNE+EL RLTGMPT+++EQIS+AV KCHK+GV+QVLVKLG+
Sbjct: 235 GGMDTPIPNELLDSIDILSPNETELSRLTGMPTETFEQISQAVAKCHKLGVKQVLVKLGS 294
Query: 294 KGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFA 347
KGSALF++GEKPI+QSIIPAA+V+DTTGAGDTFTA+FAV VEGKS EECLRFA
Sbjct: 295 KGSALFIQGEKPIQQSIIPAAQVVDTTGAGDTFTAAFAVAMVEGKSHEECLRFA 348
>gi|326497985|dbj|BAJ94855.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499770|dbj|BAJ86196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518748|dbj|BAJ92535.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 361
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/313 (68%), Positives = 263/313 (84%), Gaps = 4/313 (1%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYF 123
N PPP+VVVGSAN DIYVE++RLP VGETVAA +LAGGKGANQAACG +L+ PTY
Sbjct: 46 NAPPPIVVVGSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYL 105
Query: 124 VGQVGEDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN 182
V +VG+DANG+L+ AL+ G VRLD V + G P+GHAVVML DGQNSIIIVGG N
Sbjct: 106 VARVGDDANGRLLEGALADAGGVRLD--RVARAPGAPSGHAVVMLMPDGQNSIIIVGGAN 163
Query: 183 MSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
M W + EDL+++++AG++LLQREIPD VNIQVA+AA+ AGVPVI DAGGMDAP+P+
Sbjct: 164 MEGWAPEVDPEDLDLIRQAGVLLLQREIPDWVNIQVAQAAKGAGVPVILDAGGMDAPVPR 223
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL +DI SPNE+EL RLTGM T+++EQIS+A CHKMGV++VLVKLG++GSALFVEG
Sbjct: 224 ELLELVDIFSPNETELARLTGMLTETFEQISQAAGACHKMGVKEVLVKLGSQGSALFVEG 283
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E+PI+Q+IIPA V+DTTGAGDTFT++FAV VEGK ++EC+RFAAAAASLCV+VKGAIP
Sbjct: 284 EEPIRQAIIPATEVVDTTGAGDTFTSAFAVALVEGKPKKECMRFAAAAASLCVRVKGAIP 343
Query: 363 SMPDRKSVLNLLQ 375
SMPDR++V++LL+
Sbjct: 344 SMPDRETVMSLLE 356
>gi|326517098|dbj|BAJ99915.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 361
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/313 (68%), Positives = 263/313 (84%), Gaps = 4/313 (1%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYF 123
N PPP+VVVGSAN DIYVE++RLP VGETVAA +LAGGKGANQAACG +L+ PTY
Sbjct: 46 NAPPPIVVVGSANADIYVEVNRLPLVGETVAASAGHSLAGGKGANQAACGGRLAMGPTYL 105
Query: 124 VGQVGEDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN 182
V +VG+DANG+L+ AL+ G VRLD V + G P+GHAVVML DGQNSIIIVGG N
Sbjct: 106 VARVGDDANGRLLEGALADAGGVRLD--RVARAPGAPSGHAVVMLMPDGQNSIIIVGGAN 163
Query: 183 MSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
M W + EDL+++++AG++LLQREIPD VNIQVA+AA+ AGVPVI DAGGMDAP+P+
Sbjct: 164 MEGWAPEVDPEDLDLIRQAGVLLLQREIPDWVNIQVAQAAKGAGVPVILDAGGMDAPVPR 223
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL +DI SPNE+EL RLTGM T+++EQIS+A CHKMGV++VLVKLG++GSALFVEG
Sbjct: 224 ELLELVDIFSPNETELARLTGMLTETFEQISQAAGACHKMGVKEVLVKLGSQGSALFVEG 283
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E+PI+Q+IIPA V+DTTGAGDTFT++FAV VEGK ++EC+RFAAAAASLCV+VKGAIP
Sbjct: 284 EEPIRQAIIPATEVVDTTGAGDTFTSAFAVALVEGKPKKECMRFAAAAASLCVRVKGAIP 343
Query: 363 SMPDRKSVLNLLQ 375
SMPDR++V++LL+
Sbjct: 344 SMPDRETVMSLLE 356
>gi|357135836|ref|XP_003569514.1| PREDICTED: ribokinase-like isoform 1 [Brachypodium distachyon]
gi|357135838|ref|XP_003569515.1| PREDICTED: ribokinase-like isoform 2 [Brachypodium distachyon]
Length = 361
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/315 (67%), Positives = 260/315 (82%), Gaps = 4/315 (1%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS-HPTYF 123
N PPP+VVVGSAN DIYVE+DRLP VGETVAA+ +LAGGKGANQAACG +L+ PTY
Sbjct: 46 NAPPPVVVVGSANADIYVEVDRLPLVGETVAARAGHSLAGGKGANQAACGGRLALGPTYL 105
Query: 124 VGQVGEDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN 182
V +VG+DANG+L+ AL+ G VRLD V + G P+GHAVVML DGQNSIIIVGG N
Sbjct: 106 VARVGDDANGRLLEGALAHAGGVRLD--RVARAPGAPSGHAVVMLMPDGQNSIIIVGGAN 163
Query: 183 MSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
M W EDL+++++AG++LLQREIPD VNIQVA+AA+ AGVPVI DAGGMDAP+P
Sbjct: 164 MEGWATAVDPEDLDLIRQAGVLLLQREIPDWVNIQVAQAAKGAGVPVILDAGGMDAPVPG 223
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL +DI SPNE+EL RLTGMPT+++EQI++A CHKMGV++VLVK G++GSALFVEG
Sbjct: 224 ELLGLVDIFSPNETELARLTGMPTETFEQINQAAGACHKMGVKEVLVKRGSQGSALFVEG 283
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E PI+Q IIPA V+DTTGAGDTFT++FAV VEGK ++EC+RFAAAAASLCV++KGAIP
Sbjct: 284 EDPIRQPIIPATEVVDTTGAGDTFTSAFAVALVEGKPKKECMRFAAAAASLCVRIKGAIP 343
Query: 363 SMPDRKSVLNLLQYA 377
SMPDR +V++LL+ A
Sbjct: 344 SMPDRNAVMSLLESA 358
>gi|358348734|ref|XP_003638398.1| Ribokinase [Medicago truncatula]
gi|355504333|gb|AES85536.1| Ribokinase [Medicago truncatula]
Length = 409
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/331 (67%), Positives = 266/331 (80%), Gaps = 10/331 (3%)
Query: 24 LNKPINTIPFHFTITNR-----QFPAHVIKCQCQRRDQNPVPK---NPINTPPPLVVVGS 75
+N+ + P H+ +TN+ + P ++ + + PV + NP + PP+VVVGS
Sbjct: 1 MNQTTLSSPHHYHLTNQPNTNTKNPTQFLRFRQNDKQNLPVLRFAVNPSSQVPPVVVVGS 60
Query: 76 ANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKL 135
AN DIYVEIDRLPK GET++AK+ QTLAGGKGANQA CGAKLSHPTYF+GQVG DA+G L
Sbjct: 61 ANADIYVEIDRLPKEGETISAKSGQTLAGGKGANQACCGAKLSHPTYFLGQVGNDAHGNL 120
Query: 136 ITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDL 195
+ DAL GVRLDY+ VV PTGHAVVMLQS GQNSI+IVGG N+SCWP+ + L
Sbjct: 121 VADALRDGGVRLDYLAVVSSA--PTGHAVVMLQSSGQNSIVIVGGANVSCWPQTLPPKQL 178
Query: 196 EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNE 255
EVV AGIVLLQREIPD VN+QVAKAA+SAGVPVIFDAGGMDAPIPQELL+F+DI SPNE
Sbjct: 179 EVVSSAGIVLLQREIPDFVNVQVAKAAKSAGVPVIFDAGGMDAPIPQELLDFVDIFSPNE 238
Query: 256 SELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAAR 315
SELGRLTG+PT+S+E+I++A KCHK+GV+QVLVKLGAKGSALF++GE+PI+Q I A
Sbjct: 239 SELGRLTGLPTESFEEITQAAAKCHKLGVKQVLVKLGAKGSALFIDGEEPIQQPAIFAKT 298
Query: 316 VIDTTGAGDTFTASFAVGFVEGKSREECLRF 346
VIDTTGAGDTFTA+FAV VEGKS++ECLRF
Sbjct: 299 VIDTTGAGDTFTAAFAVALVEGKSKKECLRF 329
>gi|356546796|ref|XP_003541808.1| PREDICTED: ribokinase-like [Glycine max]
Length = 361
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/307 (70%), Positives = 260/307 (84%), Gaps = 2/307 (0%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
PP+VVVGSAN DIYVE+DRLP GET+AA++ QT+AGGKGANQA C AKL++PTYFVGQV
Sbjct: 54 PPVVVVGSANADIYVEVDRLPGEGETLAARSGQTIAGGKGANQATCSAKLAYPTYFVGQV 113
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+L+T L G GVRLD + VV TGHAVVMLQS+GQNSI+ +GG N+SCWP
Sbjct: 114 GDDAYGRLVTAGLRGGGVRLDNLAVVASAA--TGHAVVMLQSNGQNSIVYIGGANLSCWP 171
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ L++V +AGIVLLQREIPD+VN QVA+AA++AGVPV+ DAGGMD P+P +L+NF
Sbjct: 172 SSLPRQHLDLVAQAGIVLLQREIPDAVNAQVAQAAKNAGVPVVLDAGGMDGPLPPQLINF 231
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+DILSPNE+EL RLTGMPT+S+E+I +A +KCH+MG +QVLVKLG KGSALFVEGEK I+
Sbjct: 232 VDILSPNETELARLTGMPTESFEEIQQAALKCHEMGAKQVLVKLGHKGSALFVEGEKTIQ 291
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
Q I A V+DTTGAGDTFTA+FAV VEGKS++ECLRFAAAAA LCVQVKGA PSMPDR
Sbjct: 292 QPAILAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAACLCVQVKGASPSMPDR 351
Query: 368 KSVLNLL 374
KSVL+LL
Sbjct: 352 KSVLDLL 358
>gi|115439033|ref|NP_001043796.1| Os01g0665400 [Oryza sativa Japonica Group]
gi|55773816|dbj|BAD72354.1| ribokinase-like [Oryza sativa Japonica Group]
gi|113533327|dbj|BAF05710.1| Os01g0665400 [Oryza sativa Japonica Group]
Length = 367
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/308 (68%), Positives = 258/308 (83%), Gaps = 4/308 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYFVGQVG 128
+VVVGSAN DIYVE+DRLP VGETVAA+ ++LAGGKGANQAACG +L+ PTY V +VG
Sbjct: 57 IVVVGSANADIYVEVDRLPLVGETVAARAGRSLAGGKGANQAACGGRLAAGPTYLVARVG 116
Query: 129 EDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
+DANG+L+ AL+ G VRLD V + G P+GHAVVML GQNSIIIVGG NM W
Sbjct: 117 DDANGRLLEGALADAGGVRLD--RVARAPGAPSGHAVVMLMPGGQNSIIIVGGANMEGWA 174
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
G +DL+++++AG++LLQREIPD VN+QVA+AA+ AGVPVI DAGGMDAP+P ELL+
Sbjct: 175 SGVGSDDLDLIRRAGVLLLQREIPDWVNVQVAQAAKGAGVPVILDAGGMDAPVPGELLSL 234
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+DI SPNE+EL RLTGMPT+++EQIS A CHKMGV++VLVKLG++GSALF+EG +PI+
Sbjct: 235 VDIFSPNETELARLTGMPTETFEQISRAAGACHKMGVKEVLVKLGSQGSALFIEGGEPIR 294
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
Q IIPA V+DTTGAGDTFT++FAV VEGK +EEC+RFAAAAASLCVQVKGAIPSMPDR
Sbjct: 295 QPIIPATEVVDTTGAGDTFTSAFAVALVEGKPKEECMRFAAAAASLCVQVKGAIPSMPDR 354
Query: 368 KSVLNLLQ 375
KSV++LL+
Sbjct: 355 KSVMDLLE 362
>gi|242053911|ref|XP_002456101.1| hypothetical protein SORBIDRAFT_03g030470 [Sorghum bicolor]
gi|241928076|gb|EES01221.1| hypothetical protein SORBIDRAFT_03g030470 [Sorghum bicolor]
Length = 364
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/310 (69%), Positives = 258/310 (83%), Gaps = 4/310 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS-HPTYFVGQVG 128
+VVVGSAN DIYVE+DRLP +GETVAA+ ++LAGGKGANQAACG +L+ PTY V +VG
Sbjct: 54 IVVVGSANADIYVEVDRLPLIGETVAARAGRSLAGGKGANQAACGGRLALGPTYLVARVG 113
Query: 129 EDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
+DANG+L+ AL+ G VR D V + P+GHAVVML DGQNSIIIVGG NM W
Sbjct: 114 DDANGRLLEGALADAGGVRTD--RVARAADAPSGHAVVMLMPDGQNSIIIVGGANMEGWA 171
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
G EDLE+++KAG++LLQREIPD VN Q A+AA+SAGVPVI DAGGMDAP+P ELL+
Sbjct: 172 AGIGPEDLELIRKAGVLLLQREIPDWVNAQAAQAAKSAGVPVIMDAGGMDAPVPGELLSL 231
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+DI SPNE+EL RLTGMPT+++EQIS+A +CHKMGV++VLVKLG++GSALFVEGE+PI+
Sbjct: 232 VDIFSPNETELARLTGMPTETFEQISQAAGECHKMGVREVLVKLGSQGSALFVEGEEPIR 291
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
Q IIPA VIDTTGAGDTFT++FAV VEGK +EEC+RFAAAAASLCV+VKGAIPSMPDR
Sbjct: 292 QPIIPATEVIDTTGAGDTFTSAFAVALVEGKPKEECMRFAAAAASLCVRVKGAIPSMPDR 351
Query: 368 KSVLNLLQYA 377
KSV+ LL A
Sbjct: 352 KSVMKLLDSA 361
>gi|226506256|ref|NP_001149557.1| ribokinase [Zea mays]
gi|195627994|gb|ACG35827.1| ribokinase [Zea mays]
gi|223973967|gb|ACN31171.1| unknown [Zea mays]
Length = 364
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/308 (69%), Positives = 256/308 (83%), Gaps = 4/308 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS-HPTYFVGQVG 128
+VVVGSAN DIYVE+DRLP +GETVAA+ ++LAGGKGANQAACG +L+ PTY V +VG
Sbjct: 54 IVVVGSANADIYVEVDRLPLIGETVAARAGRSLAGGKGANQAACGGRLALGPTYLVARVG 113
Query: 129 EDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
+DANG+L+ AL+ G VR D V + P+GHAVVML DGQNSIIIVGG NM W
Sbjct: 114 DDANGRLLEGALADAGGVRTD--RVARAADAPSGHAVVMLMPDGQNSIIIVGGANMEGWA 171
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
G EDLE+++KAG++LLQREIPD VN Q A+AA+SAGVPVI DAGGMD P+P+ELL+
Sbjct: 172 AGIGSEDLELIRKAGVLLLQREIPDWVNAQAAQAAKSAGVPVIMDAGGMDTPLPRELLSL 231
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+DI SPNE+EL RLTGMPT+++EQIS A KCHKMGVQ+VLVKLG++GSALFVEGE+PI+
Sbjct: 232 VDIFSPNETELARLTGMPTETFEQISMAAGKCHKMGVQEVLVKLGSQGSALFVEGEEPIR 291
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
Q I+PA VIDTTGAGDTFT++FAV VEGK + EC+RFAAAAASLCV+VKGAIPSMPDR
Sbjct: 292 QPIVPATEVIDTTGAGDTFTSAFAVALVEGKPKRECMRFAAAAASLCVRVKGAIPSMPDR 351
Query: 368 KSVLNLLQ 375
KSV+ LL+
Sbjct: 352 KSVMKLLE 359
>gi|218188803|gb|EEC71230.1| hypothetical protein OsI_03171 [Oryza sativa Indica Group]
Length = 377
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/318 (66%), Positives = 258/318 (81%), Gaps = 14/318 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYFVGQVG 128
+VVVGSAN DIYVE+DRLP VGETVAA+ ++LAGGKGANQAACG +L+ PTY V +VG
Sbjct: 57 IVVVGSANADIYVEVDRLPLVGETVAARAGRSLAGGKGANQAACGGRLAAGPTYLVARVG 116
Query: 129 EDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
+DANG+L+ AL+ G VRLD V + G P+GHAVVML GQNSIIIVGG NM W
Sbjct: 117 DDANGRLLEGALADAGGVRLD--RVARAPGAPSGHAVVMLMPGGQNSIIIVGGANMEGWA 174
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
G +DL+++++AG++LLQREIPD VN+QVA+AA+ AGVPVI DAGGMDAP+P ELL+
Sbjct: 175 SGVGSDDLDLIRRAGVLLLQREIPDWVNVQVAQAAKGAGVPVILDAGGMDAPVPGELLSL 234
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM----------GVQQVLVKLGAKGSA 297
+DI SPNE+EL RLTGMPT+++EQIS A CHKM GV++VLVKLG++GSA
Sbjct: 235 VDIFSPNETELARLTGMPTETFEQISRAAGACHKMDNCNMRNCIKGVKEVLVKLGSQGSA 294
Query: 298 LFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQV 357
LF+EG +PI+Q IIPA V+DTTGAGDTFT++FAV VEGK +EEC+RFAAAAASLCVQV
Sbjct: 295 LFIEGGEPIRQPIIPATEVVDTTGAGDTFTSAFAVALVEGKPKEECMRFAAAAASLCVQV 354
Query: 358 KGAIPSMPDRKSVLNLLQ 375
KGAIPSMPDRKSV++LL+
Sbjct: 355 KGAIPSMPDRKSVMDLLE 372
>gi|116778788|gb|ABK20996.1| unknown [Picea sitchensis]
gi|224284633|gb|ACN40049.1| unknown [Picea sitchensis]
gi|224286214|gb|ACN40816.1| unknown [Picea sitchensis]
gi|224286430|gb|ACN40922.1| unknown [Picea sitchensis]
Length = 326
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/322 (66%), Positives = 249/322 (77%), Gaps = 11/322 (3%)
Query: 61 KNPIN-TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH 119
NP T P+VVVGSAN DIYVEIDRLPK GET+AA+ QTLAGGKGANQAAC +LSH
Sbjct: 2 SNPTRATDLPVVVVGSANADIYVEIDRLPKEGETIAARGGQTLAGGKGANQAACAGRLSH 61
Query: 120 PTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG 179
PTYFVGQVG+DA+G L+ DALS CGVRLDY+N V D PTGHAVVMLQ GQNSIIIVG
Sbjct: 62 PTYFVGQVGKDAHGSLMKDALSSCGVRLDYLNTVSD---PTGHAVVMLQPGGQNSIIIVG 118
Query: 180 GTNMSCWP------EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDA 233
G N+S WP +++++AGIVLLQRE+P+S+N++VAK ARSA VPVI DA
Sbjct: 119 GANVS-WPILEDGMSCLSANAQQIIREAGIVLLQREVPNSLNLEVAKIARSANVPVILDA 177
Query: 234 GGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGA 293
GGM+ PIP+ LL IDI SPNE+EL RLTG T++ +++ EA KCH+MGV+QVLVKLG
Sbjct: 178 GGMEGPIPENLLKCIDIFSPNETELERLTGASTNTIDEVIEAAAKCHEMGVKQVLVKLGE 237
Query: 294 KGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASL 353
KGS L EG PI Q I A V+DTTGAGDTFTA+FAV VEG S E LRFAAAAASL
Sbjct: 238 KGSVLVTEGLPPILQPAILAPMVLDTTGAGDTFTAAFAVALVEGNSVAESLRFAAAAASL 297
Query: 354 CVQVKGAIPSMPDRKSVLNLLQ 375
C+QVKGAIPSMPDR +VL LL+
Sbjct: 298 CIQVKGAIPSMPDRNAVLQLLK 319
>gi|168043985|ref|XP_001774463.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674175|gb|EDQ60687.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 320
Score = 367 bits (942), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 187/313 (59%), Positives = 236/313 (75%), Gaps = 10/313 (3%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
PLVVVGS N DIYVE++RLP GET+AA++ QTL GGKGANQAAC A+LS+PT+F GQVG
Sbjct: 6 PLVVVGSVNADIYVEVERLPAEGETIAARSGQTLPGGKGANQAACAARLSYPTFFCGQVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+DA+ L+ +AL GV LD++N V PTGHAVV+LQ G+NSIIIVGG N++ WP+
Sbjct: 66 QDAHANLVRNALVSAGVHLDHVNTVD---APTGHAVVILQPGGKNSIIIVGGANVA-WPK 121
Query: 189 ------KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
E++K+AG VLLQREIPD+VN++ AK A+SAGVPVI DAGG + PIP+
Sbjct: 122 LEDGISSLTTNAQELIKRAGAVLLQREIPDAVNLEAAKIAKSAGVPVIMDAGGAEGPIPE 181
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL + +LSPNE+EL RLT MPT+S E+I A K +MGV+QVLVK+G GS L E
Sbjct: 182 ELLKCLTVLSPNETELARLTDMPTNSGEEILTAAKKVLEMGVKQVLVKMGENGSMLVSEK 241
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E PI Q I A V+DTTGAGDTFTA++AV +E ++ E LRFAAA+AS+CV+ KGA+P
Sbjct: 242 ESPIHQPAILAPVVVDTTGAGDTFTAAYAVALIERQTLVEALRFAAASASICVRFKGAMP 301
Query: 363 SMPDRKSVLNLLQ 375
SMP+RK+VL LL+
Sbjct: 302 SMPERKAVLQLLK 314
>gi|222619006|gb|EEE55138.1| hypothetical protein OsJ_02927 [Oryza sativa Japonica Group]
Length = 364
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 183/292 (62%), Positives = 226/292 (77%), Gaps = 14/292 (4%)
Query: 74 GSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYFVGQVGEDAN 132
G AN DIYVE+DRLP VGETVAA+ ++LAGGKGANQAACG +L+ PTY V +VG DAN
Sbjct: 68 GLANADIYVEVDRLPLVGETVAARAGRSLAGGKGANQAACGGRLAAGPTYLVARVGNDAN 127
Query: 133 GKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
G+L+ AL G VRLD V + G P+GHAVVML GQNSIIIVGG NM W G
Sbjct: 128 GRLLEGALGDAGGVRLD--RVARAPGAPSGHAVVMLMPGGQNSIIIVGGANMEGWASGVG 185
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
+DL+++++AG++LLQREIPD VN+QVA+AA+ AGVPVI DAGGMDAP+P ELL+ +DI
Sbjct: 186 SDDLDLIRRAGVLLLQREIPDWVNVQVAQAAKGAGVPVILDAGGMDAPVPGELLSLVDIF 245
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKM----------GVQQVLVKLGAKGSALFVE 301
SPNE+EL RLTGMPT+++EQIS A CHKM GV++VLVKLG++GSALF+E
Sbjct: 246 SPNETELARLTGMPTETFEQISRAAGACHKMDNCNMRNCIKGVKEVLVKLGSQGSALFIE 305
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASL 353
G +PI+Q IIPA V+DTTGAGDTFT++FAV VEGK +EEC+RFA ++L
Sbjct: 306 GGEPIRQPIIPATEVVDTTGAGDTFTSAFAVALVEGKPKEECMRFAGTESTL 357
>gi|168042883|ref|XP_001773916.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674760|gb|EDQ61264.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 309
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/313 (61%), Positives = 236/313 (75%), Gaps = 10/313 (3%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
PLVVVGS N DIYVE++RLP GET+AA++ QTL GGKGANQAAC A+LS+PT+F GQVG
Sbjct: 1 PLVVVGSVNADIYVEVERLPVEGETIAARSGQTLPGGKGANQAACAARLSYPTFFCGQVG 60
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D + L+ DAL+ GVRLD++N V PTGHAVVMLQ G+NSIIIVGG N++ WP+
Sbjct: 61 LDGHANLVKDALASAGVRLDHVNTVDS---PTGHAVVMLQPGGKNSIIIVGGANVA-WPK 116
Query: 189 ------KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
+ +++K+AG VLLQREIPD+VN++ AK A+SAGVPVI DAGG + PIP+
Sbjct: 117 LEDGISRLTANAQQLIKRAGAVLLQREIPDAVNLEAAKVAKSAGVPVIMDAGGAEGPIPE 176
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL + +LSPNESEL RLT MPT+S E+I A K +MGVQQVLVK+G GS L
Sbjct: 177 ELLKHVTVLSPNESELARLTAMPTNSLEKILLAAAKVQEMGVQQVLVKMGETGSVLVSGK 236
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E PI Q I A V+DTTGAGDTFTAS+AV +E ++ E LRFAAAAAS+CV+ KGA+P
Sbjct: 237 EPPIYQPAILAPTVVDTTGAGDTFTASYAVALIERQTPAEALRFAAAAASICVRSKGAMP 296
Query: 363 SMPDRKSVLNLLQ 375
SMP+RK+VL LL+
Sbjct: 297 SMPERKAVLQLLK 309
>gi|302788364|ref|XP_002975951.1| hypothetical protein SELMODRAFT_232676 [Selaginella moellendorffii]
gi|300156227|gb|EFJ22856.1| hypothetical protein SELMODRAFT_232676 [Selaginella moellendorffii]
Length = 333
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 231/325 (71%), Gaps = 21/325 (6%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
PLVVVGSAN DIYVE+DR+PK GET+AA+ QTL GGKGANQAAC A+LS PT+FVGQVG
Sbjct: 9 PLVVVGSANADIYVELDRMPKEGETLAARNGQTLPGGKGANQAACAARLSFPTFFVGQVG 68
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N ++ DAL GVRLDY+N V PTGHA+VMLQ +G NSI+IVGG N + W +
Sbjct: 69 KDGNATMLRDALQTSGVRLDYLNTVSG---PTGHAIVMLQPNGLNSIVIVGGAN-TAWKK 124
Query: 189 KFGDEDL-----EVVKKAGIVLLQREIPDSVNIQVAKA------------ARSAGVPVIF 231
+ G + E ++KAG +LLQREIPD V + AR A +PVI
Sbjct: 125 RTGSSSIPVQAEETIRKAGALLLQREIPDDFLFFVLRCEARSYFGCLFRIAREADIPVIM 184
Query: 232 DAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKL 291
DAGG D+PIP+ELL +I +LSPNE+EL RLT MPT++ +++ A KC MGV+QVLVK
Sbjct: 185 DAGGFDSPIPEELLKYITVLSPNETELARLTSMPTETTQEVVRAANKCLDMGVKQVLVKR 244
Query: 292 GAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAA 351
G +GS L E PI Q IPA V+DTTGAGDTFTA+F V +EGK E LRFAAAAA
Sbjct: 245 GVQGSMLAKADESPILQPAIPAPAVVDTTGAGDTFTAAFTVAILEGKEPAEALRFAAAAA 304
Query: 352 SLCVQVKGAIPSMPDRKSVLNLLQY 376
S+CV+ KGAIPSMP+RK+V +L++
Sbjct: 305 SVCVRAKGAIPSMPNRKAVDEVLKH 329
>gi|302142800|emb|CBI20095.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/193 (79%), Positives = 176/193 (91%)
Query: 183 MSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
MS WP+ DEDL++V+ AGIVLLQREIPD VNIQVAKAAR AGVPVI DAGGMDAPIP
Sbjct: 1 MSFWPDTLSDEDLKIVRNAGIVLLQREIPDFVNIQVAKAARDAGVPVILDAGGMDAPIPV 60
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELLN +DILSPNESEL RLT MPT+S+EQIS+AV KCH+MGV++VLVKLG KGSALFV+G
Sbjct: 61 ELLNVVDILSPNESELARLTRMPTESFEQISQAVAKCHEMGVKEVLVKLGEKGSALFVKG 120
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E+PI+Q II AA+V+DTTGAGDTFTA+FAV FVEG+S++ECLRFAAAAASLCVQVKGAIP
Sbjct: 121 EEPIRQPIIYAAKVLDTTGAGDTFTAAFAVAFVEGRSKKECLRFAAAAASLCVQVKGAIP 180
Query: 363 SMPDRKSVLNLLQ 375
SMPDR+SVL+LLQ
Sbjct: 181 SMPDRRSVLDLLQ 193
>gi|302770228|ref|XP_002968533.1| hypothetical protein SELMODRAFT_409434 [Selaginella moellendorffii]
gi|300164177|gb|EFJ30787.1| hypothetical protein SELMODRAFT_409434 [Selaginella moellendorffii]
Length = 295
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 173/313 (55%), Positives = 215/313 (68%), Gaps = 35/313 (11%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
PLVVVGSAN D+YVE+DR+PK GET+AA+ QTL GGKGANQAAC A+LS PT+FVGQVG
Sbjct: 9 PLVVVGSANADMYVELDRMPKEGETLAARNGQTLPGGKGANQAACAARLSFPTFFVGQVG 68
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N ++ DAL GVRLDY+N V PTGHA+VMLQ +G NSI+IVGG N + W +
Sbjct: 69 KDGNATMLRDALQTSGVRLDYLNTVSG---PTGHAIVMLQPNGLNSIVIVGGAN-TAWKK 124
Query: 189 KFGDEDL-----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ G + E ++KAG +LLQREIPD VNI+ AK
Sbjct: 125 RTGSSTIPVQAEETIRKAGALLLQREIPDDVNIEAAK----------------------- 161
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+I +LSPNE+EL RLT MPT++ +++ A KC MGV+QVLVK G +GS L E
Sbjct: 162 ---YITVLSPNETELARLTSMPTETTQEVVRAANKCLDMGVKQVLVKRGVQGSMLAKADE 218
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
PI Q IPA V+DTTGAGDTFTA+F V +EGK E LRFAAAAAS+CV+ KGAIPS
Sbjct: 219 SPILQPAIPAPAVVDTTGAGDTFTAAFTVAILEGKEPAEALRFAAAAASVCVRAKGAIPS 278
Query: 364 MPDRKSVLNLLQY 376
MP+RK+V +L++
Sbjct: 279 MPNRKAVDEVLKH 291
>gi|302845118|ref|XP_002954098.1| hypothetical protein VOLCADRAFT_106272 [Volvox carteri f.
nagariensis]
gi|300260597|gb|EFJ44815.1| hypothetical protein VOLCADRAFT_106272 [Volvox carteri f.
nagariensis]
Length = 354
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 219/308 (71%), Gaps = 7/308 (2%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
PL+VVGS N D+ + IDRLPK GET+AA + +T+ GGKGANQAA A+ +PT+F+GQ G
Sbjct: 48 PLIVVGSVNADLVLPIDRLPKPGETLAAASIETVPGGKGANQAAAAARSGYPTFFIGQFG 107
Query: 129 -EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
+D N L+ AL GCGV L + +D P G A+++LQ+ G+NSIIIVGG N + W
Sbjct: 108 KDDPNAALLRSALLGCGVDLSH---AQDVAGPCGTALILLQAGGENSIIIVGGANQAAW- 163
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
D +++ AG VLLQREIP+SVNI+VA+ A++AGVPV+ DAGG++ PI ELL+
Sbjct: 164 -SLSDGVKQLLSCAGAVLLQREIPESVNIEVAQLAKAAGVPVVLDAGGVEGPIAPELLSC 222
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPI 306
+ +LSPNE+EL RLTG+PTD+ +Q+ A + GVQ VLVKLG++GS L +G+ I
Sbjct: 223 LTVLSPNETELARLTGLPTDTEDQVRAAAEQLMSAGVQSVLVKLGSEGSLLLPGQGQTAI 282
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+Q I A V+DTTGAGD FTA++AV +EGK+ + L+FA+AAASLCV+ GA+ S+P
Sbjct: 283 RQQAIKAPEVLDTTGAGDCFTATYAVAVLEGKAAPQALQFASAAASLCVRRMGAMTSLPS 342
Query: 367 RKSVLNLL 374
R V LL
Sbjct: 343 RGEVEELL 350
>gi|384250641|gb|EIE24120.1| PfkB-type carbohydrate kinase [Coccomyxa subellipsoidea C-169]
Length = 316
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 168/308 (54%), Positives = 212/308 (68%), Gaps = 6/308 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVVVGS N D+ +E++RLPK GET+ A + T GGKGANQAA A+L HPTY +GQVG+
Sbjct: 15 LVVVGSINADLVLEVERLPKDGETLGASSLNTFPGGKGANQAAAAARLQHPTYIIGQVGK 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DAN L+ DALS GVRLD++ V DG P+G AV++LQ G+NSI+IVGG N + W
Sbjct: 75 DANASLLRDALSDSGVRLDHLKEV-DG--PSGTAVILLQPSGENSILIVGGANTAAW--D 129
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
F D L++++ AG VLLQREIP+ VN+ VA A +AGVPV+ D GG++ PI +LL I
Sbjct: 130 FDDAALQLLRSAGAVLLQREIPEEVNVHVASIAAAAGVPVLLDCGGVEGPISPDLLKNIS 189
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
ILSPNE+EL RLTG T+S E+ A + G VLVK G GS L V + IKQ
Sbjct: 190 ILSPNETELARLTGRKTESEEEAEAAAQVMLEQGADTVLVKRGTSGS-LQVSTDGRIKQP 248
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
I V+DTTGAGD FT ++AV +EGK E LRFAAAA++LCVQ GA+PS+P R+
Sbjct: 249 IFLVDTVVDTTGAGDCFTGAYAVAILEGKGAAESLRFAAAASALCVQKAGAMPSLPYREE 308
Query: 370 VLNLLQYA 377
VL LL+ A
Sbjct: 309 VLRLLEEA 316
>gi|159489508|ref|XP_001702739.1| PfkB-type carbohydrate kinase [Chlamydomonas reinhardtii]
gi|158280761|gb|EDP06518.1| PfkB-type carbohydrate kinase [Chlamydomonas reinhardtii]
Length = 333
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 219/310 (70%), Gaps = 7/310 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P PLVVVGS N D+ + I+RLPK GET+AA + +T+ GGKGANQAA A+ PT+FVGQ
Sbjct: 26 PKPLVVVGSVNADLVLPIERLPKPGETLAAASIETVPGGKGANQAAAAARAGFPTFFVGQ 85
Query: 127 VG-EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
G +D N L+ +AL GCGV L + V DG P G A+++LQ+ G+NSIIIVGG N +
Sbjct: 86 FGRDDPNASLLRNALLGCGVDLTHAAEV-DG--PCGTALILLQAGGENSIIIVGGANQAA 142
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
W + D ++ AG VLLQREIP+ VN++VAK A +AGVPVI DAGG++ PI +L
Sbjct: 143 W--RLSDGVKALIAGAGAVLLQREIPEPVNVEVAKLAAAAGVPVILDAGGVEGPIDPTIL 200
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEK 304
+ +LSPNE+EL RLTG+PTD+ Q+ A + GV+ VLVKLGA GS L G+
Sbjct: 201 PCLALLSPNETELARLTGLPTDTEAQVQAAAEQLMSAGVKSVLVKLGADGSLLLPGPGQP 260
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
P++Q+ I A +V+DTTGAGD FTA++AV +EGK+ E LRFA+AAAS+CVQ KGA+PS+
Sbjct: 261 PLRQAAIRAEQVVDTTGAGDCFTATYAVAVLEGKAPAEALRFASAAASICVQRKGAMPSL 320
Query: 365 PDRKSVLNLL 374
P R V LL
Sbjct: 321 PARAEVDTLL 330
>gi|307103318|gb|EFN51579.1| hypothetical protein CHLNCDRAFT_140074 [Chlorella variabilis]
Length = 304
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/301 (48%), Positives = 192/301 (63%), Gaps = 8/301 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V GS N D ++ R+P+ GET+ AK+ GGKG NQAA A+L PT V QVG
Sbjct: 5 IAVAGSVNADFVYQLLRVPRAGETLPAKSMAVHPGGKGGNQAAAAARLGCPTQLVAQVGR 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA +++ AL GCGV + V+ PTG AV++L+ DGQN II+ GG N + W +
Sbjct: 65 DAQAQMLRGALEGCGVDTSLVREVEG---PTGTAVILLEEDGQNRIILHGGANTAPW--Q 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
G+E + AG VLLQREIP++VN ++A AA GVPV+ DAGG AP+ +LL +
Sbjct: 120 LGEEARAAISSAGAVLLQREIPEAVNAELAHAA---GVPVVLDAGGATAPLSPDLLRCLA 176
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++SPNE+EL LTGMPTD+ EQI A GV VLVKLG++GS L +Q
Sbjct: 177 VISPNETELQGLTGMPTDTEEQIVAAAQVLRGQGVGTVLVKLGSRGSLLVDADGSTWRQE 236
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+V+DTTGAGD FTA+FAV +EG+ E +RFA+ AA+LC+QV GA+PSMP R+
Sbjct: 237 ARRVEKVVDTTGAGDCFTAAFAVAVLEGRPYREAMRFASVAAALCIQVAGAMPSMPSRQQ 296
Query: 370 V 370
V
Sbjct: 297 V 297
>gi|325192208|emb|CCA26659.1| ribokinase putative [Albugo laibachii Nc14]
Length = 327
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 183/318 (57%), Gaps = 18/318 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLA---GGKGANQAACGAKLSHPT----Y 122
+++VGS N D+ VE+DRLP VGET++A +S TL GGKGANQA AKL+ P+
Sbjct: 4 VLIVGSVNADLPVEVDRLPAVGETISANSS-TLTPKLGGKGANQAVAIAKLAPPSSIHSI 62
Query: 123 FVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN 182
F Q G D+NG L+ L V + + +G A++ DG NSI++VGG N
Sbjct: 63 FRCQFGIDSNGALLKQTLLDNAVDIGESETID---CDSGQAIIFRLPDGSNSIVVVGGAN 119
Query: 183 MSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
WP + ++K A +V+LQ+EIP +N +V+K A VPV +D GG D IPQ
Sbjct: 120 -RIWPTPVSAFE-NIIKAASVVMLQQEIPLKINEEVSKLAFRHNVPVFWDTGGRDQAIPQ 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
EL +I ++ PNE+EL RL +P + E+ +A K G +LV LG KGS
Sbjct: 178 ELFQYITLICPNETELARLCSLPVTNEEEAIQAAWSLQKKGANDILVTLGQKGSIHVPRT 237
Query: 303 EKPIKQSI-----IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQV 357
+ + +P + V DTTGAGDT+ +F V +V G++ +EC+ +A+AAA+LCV+
Sbjct: 238 SMDDEDQVTLVPALPVSTVCDTTGAGDTYRGAFVVHYVLGRNIKECMEYASAAAALCVRK 297
Query: 358 KGAIPSMPDRKSVLNLLQ 375
GA+ S+PD K + Q
Sbjct: 298 AGAMDSIPDYKEAEGMYQ 315
>gi|116794317|gb|ABK27092.1| unknown [Picea sitchensis]
Length = 374
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 129/166 (77%), Gaps = 11/166 (6%)
Query: 62 NPIN-TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP 120
NP T P+VVVGSAN DIYVEIDRLPK GET+AA+ QTLAGGKGANQAAC +LSHP
Sbjct: 3 NPTRATDLPVVVVGSANADIYVEIDRLPKEGETIAARGGQTLAGGKGANQAACAGRLSHP 62
Query: 121 TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180
TYFVGQVG+DA+G L+ DALS CGVRLDY+N V D PTGHAVVMLQ GQNSIIIVGG
Sbjct: 63 TYFVGQVGKDAHGSLMKDALSSCGVRLDYLNTVSD---PTGHAVVMLQPGGQNSIIIVGG 119
Query: 181 TNMSCWP------EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAK 220
N+S WP +++++AGIVLLQRE+P+S+N++VAK
Sbjct: 120 ANVS-WPILEDGMSCLSANAQQIIREAGIVLLQREVPNSLNLEVAK 164
>gi|301118450|ref|XP_002906953.1| ribokinase, putative [Phytophthora infestans T30-4]
gi|262108302|gb|EEY66354.1| ribokinase, putative [Phytophthora infestans T30-4]
Length = 324
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/318 (41%), Positives = 182/318 (57%), Gaps = 17/318 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQT---LAGGKGANQAACGAKL---SHPTY- 122
++V+GS N DI VEI RLP GET++A + T GGKG+NQAA K+ +HPT
Sbjct: 8 VLVIGSVNADIVVEISRLPVRGETLSASKADTGKFFPGGKGSNQAAAAGKIIGSNHPTLC 67
Query: 123 --FVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180
F GQ G D +G+ + AL G V + P+G A V + DG NSI+IVGG
Sbjct: 68 AKFAGQFGNDTHGEALQTALQGSDVD---TALAGHPACPSGQAFVFVYPDGDNSIVIVGG 124
Query: 181 TNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI 240
N + WPE+ + +K A I+LLQ EIP+ +N VAK A VPV++D GG D I
Sbjct: 125 ANRA-WPEELPAPLTDAIKSAAIILLQCEIPERINALVAKTAAETNVPVMWDTGGDDTLI 183
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
P +LL + + PNE+EL RLT ++ + A + G + VLV LG+ GS +F+
Sbjct: 184 PADLLPLLTYVCPNETELARLTKREVNNTDDAIAAARYLQEQGAKNVLVSLGSDGS-VFI 242
Query: 301 ---EGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQV 357
E + Q +V+DTTGAGD + +FAV F EG+ ++C+ AAAA++LCVQ
Sbjct: 243 PVDSSEVVVHQKCFKVEKVVDTTGAGDCYRGAFAVAFAEGREVQDCMARAAAASALCVQR 302
Query: 358 KGAIPSMPDRKSVLNLLQ 375
GA+PS+P V+ L
Sbjct: 303 AGALPSLPTGDEVVAFLN 320
>gi|348665868|gb|EGZ05696.1| hypothetical protein PHYSODRAFT_551144 [Phytophthora sojae]
Length = 323
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 179/316 (56%), Gaps = 14/316 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQT---LAGGKGANQAACGAKL---SHPTY- 122
++V+GS N DI VEI RLP GET++A T GGKG+NQAA K+ HPT
Sbjct: 8 VLVIGSVNADIVVEISRLPVRGETLSASKPDTGNFFPGGKGSNQAAAAGKIIGADHPTLS 67
Query: 123 --FVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180
F GQ G D +G + AL G GV + P+G A V + DG NSI+IVGG
Sbjct: 68 ARFAGQFGNDTHGDALQKALQGAGVD---TALAGHPACPSGQAFVFVYPDGDNSIVIVGG 124
Query: 181 TNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI 240
N + WP++ + +K A IVLLQ EIP+ +N VAK A VPV++D GG D PI
Sbjct: 125 ANRA-WPDELPAALTDAIKSAAIVLLQCEIPERINALVAKTAAETNVPVMWDTGGDDTPI 183
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF- 299
P +LL + + PNE+EL RLT S + A + G + VLV LG+ GS
Sbjct: 184 PADLLPLLTFVCPNETELARLTKREVKSTDDAVAAARFLQEQGAKNVLVTLGSDGSVFVP 243
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
+G + + Q +V+DTTGAGD + +FAV + EG+ +C+ AAAA++LCVQ G
Sbjct: 244 ADGSELVHQKCFKVDKVVDTTGAGDCYRGAFAVAYAEGREVLDCMARAAAASALCVQRAG 303
Query: 360 AIPSMPDRKSVLNLLQ 375
A+PS+P V+ L+
Sbjct: 304 ALPSLPLGDEVVAFLK 319
>gi|302779804|ref|XP_002971677.1| hypothetical protein SELMODRAFT_412197 [Selaginella moellendorffii]
gi|300160809|gb|EFJ27426.1| hypothetical protein SELMODRAFT_412197 [Selaginella moellendorffii]
Length = 1333
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 195/316 (61%), Gaps = 21/316 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS ++ V+++RLP GET+AA++S AGG+G NQAAC A+LS PT + QVG
Sbjct: 1026 VLVLGSVYANVVVQLERLPLAGETLAARSSSCSAGGRGVNQAACAARLSCPTNLIAQVGN 1085
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE- 188
D + L+ +AL+ GVR+D+++ V V TG AVVM+Q G+ ++I+V G N+S WP
Sbjct: 1086 DGHAALVREALASAGVRVDHLSTV---SVATGQAVVMMQGVGK-TVIVVEGANVS-WPRL 1140
Query: 189 -----KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ + ++ A ++LLQREIPD+VNI+ AK A++AGVPV+ GG ++ +P E
Sbjct: 1141 DDGYGRLQPAAQQNIRAAAVLLLQREIPDAVNIEAAKIAKTAGVPVVLSTGGSESLLPAE 1200
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKC-HKMGVQQVLVKLGAKGSALFVEG 302
LL + +LS ++ EL R G+ D+ + A +C MGV+QVL++L ++G L V
Sbjct: 1201 LLECVTVLSTSDEELARAVGLKGDTEDDAVAAARRCIADMGVKQVLLQLRSQGLLLLVTQ 1260
Query: 303 EKPIKQSIIPAARVIDTTGAGDTF--TASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
++ + +++ A T+ GD A F++ + L+FAA AA LC + G
Sbjct: 1261 DE--ETAVVSAP----TSSLGDDIATAAYAVAAFIDAQPHPSALKFAACAALLCNR-PGG 1313
Query: 361 IPSMPDRKSVLNLLQY 376
I ++PDRK+VL+ L +
Sbjct: 1314 IAALPDRKAVLDHLVH 1329
>gi|307111148|gb|EFN59383.1| hypothetical protein CHLNCDRAFT_137863 [Chlorella variabilis]
Length = 711
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 183/315 (58%), Gaps = 21/315 (6%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKT--SQTLAGGKGANQAACGAKLS----HP 120
PP ++ VGS N D+ V +DR+P GET+ A++ + T GGKGANQA A+LS
Sbjct: 29 PPSILTVGSLNLDVIVAVDRMPTGGETIMARSPAATTAVGGKGANQAVAAARLSAGSGRA 88
Query: 121 TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180
+ FV Q G D++ + AL GV + +GH V+L+ DG + I++GG
Sbjct: 89 SKFVCQFGNDSHAAAMEAALVAEGVDVSL----------SGH--VLLEPDGGATSIVLGG 136
Query: 181 TNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI 240
+N + +P + + +++ G+V+LQRE+P+ VN VA AA AGVPV+ D GG D PI
Sbjct: 137 SN-TAFPREAPEALAHLMEGTGVVMLQREVPEHVNEAVAAAAAKAGVPVLLDVGGEDRPI 195
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
+LL +D + PNESEL RLTG+PT S Q+ A + G + VLV LG +GS L
Sbjct: 196 SDDLLPLLDYVCPNESELARLTGLPTASEAQVLAAAAALQRRGARSVLVTLGPRGSLLAA 255
Query: 301 EGEKPIKQSI--IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
++Q +P A V+D T AGD F A+FAV VEG+ ECLRFA+AA +
Sbjct: 256 PDGSVLRQEALGLPGAAVVDATAAGDAFRAAFAVALVEGRPLRECLRFASAAGGIATSRM 315
Query: 359 GAIPSMPDRKSVLNL 373
GA+PS+P R+ L
Sbjct: 316 GAVPSLPGRQETEQL 330
>gi|146161802|ref|XP_001033476.2| kinase, pfkB family protein [Tetrahymena thermophila]
gi|146142821|gb|EAR85813.2| kinase, pfkB family protein [Tetrahymena thermophila SB210]
Length = 337
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/332 (38%), Positives = 183/332 (55%), Gaps = 33/332 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS +FD+++ ++ P GET+ A S GGKGANQA AKL T F GQ G+
Sbjct: 8 ICVVGSGSFDLFLLVNHFPVEGETLQANDSFIKNGGKGANQAVAAAKLGAKTIFAGQFGQ 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN-----MS 184
D G + + +S GV D V + V TG A++ L G+NSIIIVGG N ++
Sbjct: 68 DKYGDGLVEEMSQSGV--DMSKVRRLANVQTGQAIITLNKKGENSIIIVGGANTHYDHLN 125
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
P++F D ++ + I+LLQ+EIP ++ A A+ V+ D GG D IP+EL
Sbjct: 126 VLPQEFKD----AIQSSRIILLQKEIPLEISKLAAIYAKQHNKLVMLDCGGRDEDIPEEL 181
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVK---CHKMGVQQVLVKLGAKGSA---- 297
L ID +SPN+SEL R+ + + + +I+ ++ K V++K G+KGSA
Sbjct: 182 LQNIDFISPNQSELKRVMNINSSDHGEITIDEIRQQLLSKYPNLTVVLKEGSKGSAVITK 241
Query: 298 ---LFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVE-----GKSREE------- 342
L V+ IK I+ +++DTTGAGD FTA+F V F + G E+
Sbjct: 242 TDYLHVDSASLIKPDILNTYKIVDTTGAGDCFTAAFCVEFDKLFPQNGVQYEDALEKYKK 301
Query: 343 CLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
CL FA +A +C+ V GA+PSMP +SV LL
Sbjct: 302 CLLFANCSAFVCITVMGAMPSMPKLESVQQLL 333
>gi|255080094|ref|XP_002503627.1| ribokinase/xylose isomerase [Micromonas sp. RCC299]
gi|226518894|gb|ACO64885.1| ribokinase/xylose isomerase [Micromonas sp. RCC299]
Length = 716
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 183/329 (55%), Gaps = 26/329 (7%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQT--LAGGKGANQAACGAKL---SHPT 121
PP +VVVGS N D+ V++ R P + ETV A + GGKGANQA A+L S P
Sbjct: 39 PPHIVVVGSVNVDLTVKVARPPALEETVTATDPRVSVAVGGKGANQAVAAARLVAGSRPV 98
Query: 122 YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGT 181
FVGQ G D++ ++ L GV + D +P+G +VML G+ S ++VGG
Sbjct: 99 RFVGQFGGDSHASMLEQELVANGVDVSLSGRHPD--LPSGTGLVMLSPGGEASSVVVGGA 156
Query: 182 NMSCWPEKFGDEDL-----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM 236
N S WPE D++L + A ++LLQRE+PD VN+ A AA++AGVP++ DAGG+
Sbjct: 157 N-SAWPEN--DDELVSTMVRAARGAAVMLLQREVPDRVNLAAAAAAKAAGVPIVVDAGGV 213
Query: 237 DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS 296
DAPIP LL D L PNESEL RLT MPT + ++ A ++ G ++VLV LGA+G+
Sbjct: 214 DAPIPAALLEAADYLCPNESELARLTRMPTSTDDEAVAAGLELVAQGAKRVLVTLGARGA 273
Query: 297 ALFVEGEKPIKQSIIP--------AARVIDTTGAGDTFTASFAVGFVEGKSREECLR--- 345
+ + +P V+D T AGD F A+ AV EG + R
Sbjct: 274 MVIGATGVIARHDALPVPGGEVGKVGEVVDGTAAGDAFRAALAVAVAEGVDVVKDSRGLA 333
Query: 346 FAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
AAAA + V V GA+PS+P R NL+
Sbjct: 334 LAAAAGAHAVSVPGAVPSLPTRDEAENLI 362
>gi|413950838|gb|AFW83487.1| Ribokinase [Zea mays]
Length = 210
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 117/153 (76%), Gaps = 4/153 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS-HPTYFVGQVG 128
+VVVGSAN DIYVE+DRLP +GETVAA+ ++LAGGKGANQAACG +L+ PTY V +VG
Sbjct: 54 IVVVGSANADIYVEVDRLPLIGETVAARAGRSLAGGKGANQAACGGRLALGPTYLVARVG 113
Query: 129 EDANGKLITDALSGCG-VRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
+DANG+L+ AL+ G VR D V + P+GHAVVML DGQNSIIIVGG NM W
Sbjct: 114 DDANGRLLEGALADAGGVRTD--RVARAADAPSGHAVVMLMPDGQNSIIIVGGANMEGWA 171
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAK 220
G EDLE+++KAG++LLQREIPD VN Q A+
Sbjct: 172 AGIGSEDLELIRKAGVLLLQREIPDWVNAQAAQ 204
>gi|241896434|ref|ZP_04783730.1| ribokinase [Weissella paramesenteroides ATCC 33313]
gi|241870414|gb|EER74165.1| ribokinase [Weissella paramesenteroides ATCC 33313]
Length = 307
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 172/300 (57%), Gaps = 11/300 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + ID LP GET+A + T GGKGANQA +L +F+G VG+
Sbjct: 5 VTVLGSLNSDTILHIDHLPVQGETMAMSDASTAPGGKGANQAVAAQRLGTQVHFIGAVGQ 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+L+ +AL GV D +V + V TG A ++L+SD N+I+I+GG N C E
Sbjct: 65 DQNGELLLNALKEDGV--DTTHVAQLANVGTGAAYILLESDSHNTILILGGAN-QCISET 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE E ++ + +++ Q E P +Q K A+SAGV I + IP+EL+ D
Sbjct: 122 NVDEAKETIQSSDVLVAQFETPVVATLQAFKLAKSAGVMTILNPAPGRKTIPKELMELTD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL-FVEGEKPIKQ 308
+++PNE+E +TG+P + + A K +MG + V++ LG +G+ G++ +
Sbjct: 182 LITPNETEAEIITGIPVNDDLSMINASNKMQEMGAKNVIITLGERGAYYQLANGQRDFE- 240
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA +V +DTT AGDTF + A + K+ E +RFA+AA++L VQ GA PS+P
Sbjct: 241 ---PALKVKAVDTTAAGDTFIGALATKLTPDMKNIVESVRFASAASALTVQGAGAQPSIP 297
>gi|225390358|ref|ZP_03760082.1| hypothetical protein CLOSTASPAR_04111 [Clostridium asparagiforme
DSM 15981]
gi|225043578|gb|EEG53824.1| hypothetical protein CLOSTASPAR_04111 [Clostridium asparagiforme
DSM 15981]
Length = 312
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 168/306 (54%), Gaps = 9/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V ++ +P VGETV GGKGANQA +L +G VG
Sbjct: 5 ILVVGSLNMDMSVHMETMPAVGETVLGDGLGYQMGGKGANQACACGRLGGEVKILGCVGR 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++L GV D + + G+PTG AV+ + +G NSI+++ G N C +
Sbjct: 65 DEFGSRQIESLEAAGV--DASGLRQSPGLPTGTAVIYVDGNGDNSIVVIPGANRECGEQY 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D E+ + GIV+LQ EIP + A+ R G VI + +P ELL +D
Sbjct: 123 LRERD-ELFQWCGIVVLQMEIPMEAVLYAARRGRELGKTVILNPAPAPDRLPDELLGLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE+EL +L+G+ + A + + GV++VLV LG +G AL V+GE +
Sbjct: 182 YLTPNETELAKLSGIAAMGQADLKRAARRLIEKGVKKVLVTLGEQG-ALLVDGE---TER 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ PA +V +DTT AGD F + A EG + +E +RFA AASL V KGA S+PDR
Sbjct: 238 LYPARQVESVDTTAAGDCFNGALATALAEGMAEDEAIRFANLAASLAVTRKGAQSSLPDR 297
Query: 368 KSVLNL 373
+ V L
Sbjct: 298 EEVERL 303
>gi|421872382|ref|ZP_16304000.1| ribokinase [Brevibacillus laterosporus GI-9]
gi|372458355|emb|CCF13549.1| ribokinase [Brevibacillus laterosporus GI-9]
Length = 311
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 172/316 (54%), Gaps = 24/316 (7%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
PP + V+GS N D+ VE R PK+GET++ + GGKGANQA A+L T +G
Sbjct: 3 PPRIAVIGSLNMDVVVEAPRQPKMGETISGDHVHFIPGGKGANQAVACARLGAQTSMIGS 62
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G DA G + A+ G+++ + V++ PTG A ++L ++G N II+V G N
Sbjct: 63 LGRDAFGDSLEQAMKQEGIQVSTIKRVENA--PTGIASILL-AEGDNQIIVVAGANAHT- 118
Query: 187 PEKFGDEDL--EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D DL + VK A IVLLQ EIP + AK A+ AG VI + AP +P
Sbjct: 119 --SMTDVDLHADTVKAADIVLLQLEIPIETVVHTAKLAKEAGKMVILNP----APAQKLP 172
Query: 242 QELLNFIDILSPNESELGRLTGM----PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
EL +ID+++PNESEL LTG+ TD +S A+ H GV+ V+ LGA GSA
Sbjct: 173 DELFGYIDVMTPNESELYLLTGLEQNQATDKATTLSAAMKALHAKGVKHVVTTLGATGSA 232
Query: 298 LFVEGEK--PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCV 355
+ GE I + +V+DTTGAGD++ A A G+S E + FA+ ++L V
Sbjct: 233 YLMNGETFGTIASHKV---QVVDTTGAGDSYNAGLAYALASGQSIPEAVEFASIVSALAV 289
Query: 356 QVKGAIPSMPDRKSVL 371
GA MP K VL
Sbjct: 290 TKLGAQQGMPTMKEVL 305
>gi|335997576|ref|ZP_08563490.1| ribokinase [Lactobacillus ruminis SPM0211]
gi|335350259|gb|EGM51756.1| ribokinase [Lactobacillus ruminis SPM0211]
Length = 329
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 177/316 (56%), Gaps = 26/316 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + I RLPK GET+ GGKGANQA A+ T F+G++G+
Sbjct: 30 VTVLGSLNVDTILRIARLPKSGETMPMSDKNNAGGGKGANQAIAAARCGASTAFIGKIGD 89
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK++ L+ V Y+ +G TG A ++LQ G+NSI+I GG N +
Sbjct: 90 DENGKMMLGLLNESNVSTKYVETSSEG---TGQAFILLQDSGENSILIYGGAN-----QT 141
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
DED+ EV+ A ++ Q E P ++ + A+ +GV I + AP +PQ
Sbjct: 142 ISDEDIENAREVICSADFLVTQFETPILPAVKAFEMAKESGVVTILNP----APAKQVPQ 197
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL D+++PNE+E LTG+ D+ EA VK ++G + V++ LG+KG A + G
Sbjct: 198 ELLQHTDLITPNETEAEILTGVHVDNPASQHEAAVKLQELGAKNVIITLGSKG-AFYRVG 256
Query: 303 EKPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKG 359
E K+ +PA R IDTT AGDTF + + + S EE + FA+ A+SL VQ G
Sbjct: 257 E---KEGFVPAFKVRAIDTTAAGDTFLGALSSQLKKDFSNIEEAIVFASRASSLAVQKLG 313
Query: 360 AIPSMPDRKSVLNLLQ 375
AIPS+P +K+V + L+
Sbjct: 314 AIPSIPTKKAVEDALK 329
>gi|417972859|ref|ZP_12613744.1| ribokinase family sugar kinase [Lactobacillus ruminis ATCC 25644]
gi|346330765|gb|EGX98999.1| ribokinase family sugar kinase [Lactobacillus ruminis ATCC 25644]
Length = 304
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 177/316 (56%), Gaps = 26/316 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + I RLPK GET+ GGKGANQA A+ T F+G++G+
Sbjct: 5 VTVLGSLNVDTILRIARLPKPGETMPMSDKNNAGGGKGANQAIAAARCGASTAFIGKIGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK++ L+ V Y+ +G TG A ++LQ G+NSI+I GG N +
Sbjct: 65 DENGKMMLGLLNESNVSTKYVETSSEG---TGQAFILLQDSGENSILIYGGANQT----- 116
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
DED+ EV+ A ++ Q E P ++ + A+ +GV I + AP +PQ
Sbjct: 117 ISDEDIENAREVICSADFLVTQFETPILPAVKAFEMAKESGVVTILNP----APAKQVPQ 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL D+++PNE+E LTG+ D+ EA VK ++G + V++ LG+KG A + G
Sbjct: 173 ELLQHTDLITPNETEAEILTGVHVDNPASQHEAAVKLQELGAKNVIITLGSKG-AFYRVG 231
Query: 303 EKPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKG 359
E K+ +PA R IDTT AGDTF + + + S EE + FA+ A+SL VQ G
Sbjct: 232 E---KEGFVPAFKVRAIDTTAAGDTFLGALSSQLKKDFSNIEEAIVFASRASSLAVQKLG 288
Query: 360 AIPSMPDRKSVLNLLQ 375
AIPS+P +K+V + L+
Sbjct: 289 AIPSIPTKKAVEDALK 304
>gi|339007359|ref|ZP_08639934.1| ribokinase [Brevibacillus laterosporus LMG 15441]
gi|338776568|gb|EGP36096.1| ribokinase [Brevibacillus laterosporus LMG 15441]
Length = 311
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 171/316 (54%), Gaps = 24/316 (7%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
PP + V+GS N D+ VE R PK+GET++ + GGKGANQA A+L T +G
Sbjct: 3 PPRIAVIGSLNMDVVVEAPRQPKMGETISGDHVHFIPGGKGANQAVACARLGAQTSMIGS 62
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G DA G + A+ G+++ + V++ PTG A ++L ++G N II+V G N
Sbjct: 63 LGRDAFGDSLEQAMKQEGIQVSTIKRVENA--PTGIASILL-AEGDNQIIVVAGANAHT- 118
Query: 187 PEKFGDEDL--EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D DL + VK A IVLLQ EIP + AK A+ AG VI + AP +P
Sbjct: 119 --SMTDVDLHADTVKAADIVLLQLEIPIETVVHTAKLAKEAGKTVILNP----APAQKLP 172
Query: 242 QELLNFIDILSPNESELGRLTGM----PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
EL +ID+++PNESEL LTG+ TD S A+ H GV+ V+ LGA GSA
Sbjct: 173 DELFGYIDVMTPNESELYLLTGLEQNQATDKATTRSAAMKALHAKGVKHVVTTLGATGSA 232
Query: 298 LFVEGEK--PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCV 355
+ GE I + +V+DTTGAGD++ A A G+S E + FA+ ++L V
Sbjct: 233 YLMNGETFGTIASHKV---QVVDTTGAGDSYNAGLAYALASGQSIPEAVEFASIVSALAV 289
Query: 356 QVKGAIPSMPDRKSVL 371
GA MP K VL
Sbjct: 290 TKLGAQQGMPTMKEVL 305
>gi|323339447|ref|ZP_08079728.1| ribokinase [Lactobacillus ruminis ATCC 25644]
gi|323093120|gb|EFZ35711.1| ribokinase [Lactobacillus ruminis ATCC 25644]
Length = 317
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 177/316 (56%), Gaps = 26/316 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + I RLPK GET+ GGKGANQA A+ T F+G++G+
Sbjct: 18 VTVLGSLNVDTILRIARLPKPGETMPMSDKNNAGGGKGANQAIAAARCGASTAFIGKIGD 77
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK++ L+ V Y+ +G TG A ++LQ G+NSI+I GG N +
Sbjct: 78 DENGKMMLGLLNESNVSTKYVETSSEG---TGQAFILLQDSGENSILIYGGANQT----- 129
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
DED+ EV+ A ++ Q E P ++ + A+ +GV I + AP +PQ
Sbjct: 130 ISDEDIENAREVICSADFLVTQFETPILPAVKAFEMAKESGVVTILNP----APAKQVPQ 185
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL D+++PNE+E LTG+ D+ EA VK ++G + V++ LG+KG A + G
Sbjct: 186 ELLQHTDLITPNETEAEILTGVHVDNPASQHEAAVKLQELGAKNVIITLGSKG-AFYRVG 244
Query: 303 EKPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKG 359
E K+ +PA R IDTT AGDTF + + + S EE + FA+ A+SL VQ G
Sbjct: 245 E---KEGFVPAFKVRAIDTTAAGDTFLGALSSQLKKDFSNIEEAIVFASRASSLAVQKLG 301
Query: 360 AIPSMPDRKSVLNLLQ 375
AIPS+P +K+V + L+
Sbjct: 302 AIPSIPTKKAVEDALK 317
>gi|424923964|ref|ZP_18347325.1| ribokinase [Pseudomonas fluorescens R124]
gi|404305124|gb|EJZ59086.1| ribokinase [Pseudomonas fluorescens R124]
Length = 305
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 161/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLPK GET+ + T++GGKGANQA A+L VG
Sbjct: 2 PANVVVIGSLNMDLVTRAPRLPKGGETLIGHSFATVSGGKGANQAVAAARLGAQVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG D G + DAL + ++ V+D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDDYGVQLRDALLAEQIDCHAVSTVEDS---SGVALIVVDDNSQNAIVIVAGANGAMT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +V+ Q EIPD+ K AR+ G VI + P+P E
Sbjct: 119 PAVIDRFD-AVLQAADVVICQLEIPDATVGHALKRARALGKTVILNPAPASRPLPAEWFA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS E A + MG +V++ LGA+GS LF G K
Sbjct: 178 AIDYLIPNESEAAALSGLPVDSLETAESAASQLITMGAGKVIITLGAQGS-LFASG-KGF 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GKS E +R+ AA+L V GA PS+P
Sbjct: 236 EHFPAPKVKAVDTTAAGDTFVGGFAAALASGKSEAEAIRYGQIAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 MSDV 299
>gi|398816818|ref|ZP_10575459.1| ribokinase [Brevibacillus sp. BC25]
gi|398031957|gb|EJL25325.1| ribokinase [Brevibacillus sp. BC25]
Length = 300
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 169/306 (55%), Gaps = 18/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ + LPK GET+A+ + + GGKGANQA ++L +G VGE
Sbjct: 3 IAVVGSINMDLVTHVHHLPKAGETIASHHFELIPGGKGANQAVAASRLGAHVSMIGMVGE 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+++ L+ V ++ +K G TG A + + DG+N+I++V G N E
Sbjct: 63 DENGRVMQKGLTDAHVHIEG---IKCSGT-TGMAFINVSDDGENNIVLVPGANALVSTEH 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D +L ++K + +VLLQ EIP V K A G VI + AP + ELL
Sbjct: 119 IAD-NLSILKDSDVVLLQLEIPMHVVEYTVKEAARLGKLVILNP----APARELSSELLT 173
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ L+PNE+EL LTGMP + +++ A K G ++++V LG KG+ L + E
Sbjct: 174 HVHTLTPNETELSILTGMPVSTIDEVHAAAKKLLSGGPKRIIVTLGEKGALLVTDDEA-- 231
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IPA RV +DTT AGD+FTA+FAVG +G + E FA+ A++ V GA PS+
Sbjct: 232 --THIPAFRVEPVDTTAAGDSFTAAFAVGITQGMTETEAATFASKVAAIVVTRNGAQPSL 289
Query: 365 PDRKSV 370
P V
Sbjct: 290 PTLDEV 295
>gi|347525906|ref|YP_004832654.1| ribokinase [Lactobacillus ruminis ATCC 27782]
gi|345284865|gb|AEN78718.1| Ribokinase [Lactobacillus ruminis ATCC 27782]
Length = 304
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 177/316 (56%), Gaps = 26/316 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + I RLPK GET+ GGKGANQA A+ T F+G++G+
Sbjct: 5 VTVLGSLNVDTILRIARLPKPGETMPMSDKNNAGGGKGANQAIAAARCGASTAFIGKIGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK++ L+ V +Y+ +G TG A ++LQ G+NSI+I GG N +
Sbjct: 65 DENGKMMLGLLNESNVSTEYVETSSEG---TGQAFILLQDSGENSILIYGGANQT----- 116
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
DED+ EV+ A ++ Q E P + + A+ +GV I + AP +PQ
Sbjct: 117 ISDEDIENAREVICSADFLVTQFETPILPAAKAFEIAKESGVVTILNP----APAKQVPQ 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL D+++PNE+E LTG+ D+ EA VK ++G + V++ LG+KG A + G
Sbjct: 173 ELLQHTDLITPNETEAEILTGVHVDNPASQHEAAVKLQELGAKNVIITLGSKG-AFYRVG 231
Query: 303 EKPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKG 359
E K+ +PA R IDTT AGDTF + + + S EE + FA+ A+SL VQ G
Sbjct: 232 E---KEGFVPAFKVRAIDTTAAGDTFLGALSSQLKKDFSNIEEAIVFASRASSLAVQKLG 288
Query: 360 AIPSMPDRKSVLNLLQ 375
AIPS+P +K+V + L+
Sbjct: 289 AIPSIPTKKAVEDALK 304
>gi|403348924|gb|EJY73908.1| Kinase, pfkB family protein [Oxytricha trifallax]
Length = 333
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 178/322 (55%), Gaps = 25/322 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GSA+ D + ++DR+P +GET+ A + GGKGANQA C AKL + Q+G
Sbjct: 11 IVVLGSASQDYFFKLDRMPVIGETLDAHGFEKSLGGKGANQAICVAKLGTRCEMLVQLGN 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G GV + ++ GV TG A ++ DG+NSIII G N + +
Sbjct: 71 DDPGHRYVKEFQKHGVETTHAKLLD--GVDTGQAYILALKDGENSIIINGAANCA-YDAN 127
Query: 190 FGDED---LEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
+ D ++ + +++LQREIP+ VNI AK AR AG I D GG D P+ +ELL+
Sbjct: 128 MTELDPSWASAIRSSRVLMLQREIPEYVNIAAAKVAREAGTTTILDIGGRDEPLSEELLS 187
Query: 247 FIDILSPNESELGRLTGMPTDSYEQ--------ISEAVVKCHKMGVQQVLVKLGAKGSAL 298
+D++SPNE+EL R+ G +YE+ ++++ K K + V++K+GA+GSA
Sbjct: 188 LVDMISPNETELDRVVGKKAHNYEEAKQGLLDFVTDSETKRIKRDL-TVVLKMGAEGSAF 246
Query: 299 --FVEGEKPIKQSIIPA--------ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAA 348
+ + +++ +PA +++DTTGAGD FTA FAV EG + +E +
Sbjct: 247 LKYHKDTNTVEEVYLPAFEFKNFPELKLVDTTGAGDCFTAGFAVKLNEGATMQEAILHGN 306
Query: 349 AAASLCVQVKGAIPSMPDRKSV 370
A L + GA P++P + +
Sbjct: 307 KAGFLAITKFGAGPAIPTLEEI 328
>gi|116492987|ref|YP_804722.1| ribokinase family sugar kinase [Pediococcus pentosaceus ATCC 25745]
gi|421895078|ref|ZP_16325556.1| ribokinase protein [Pediococcus pentosaceus IE-3]
gi|116103137|gb|ABJ68280.1| Sugar kinase, ribokinase family [Pediococcus pentosaceus ATCC
25745]
gi|385271998|emb|CCG90928.1| ribokinase protein [Pediococcus pentosaceus IE-3]
Length = 303
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 170/305 (55%), Gaps = 10/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R P+ GET+A K Q GGKGANQA A+ T F+G+VG
Sbjct: 5 VVVLGSLNVDTILQVGRFPEPGETLALKDKQMAGGGKGANQAIAAARSGAETSFIGKVGT 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +Y+ K TG A VML++ G+N I+I GG+N +
Sbjct: 65 DANGQFMLKQLLDSGVSTEYVATSKVA--DTGQAFVMLENTGENRILIYGGSNAELNEDD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E +++A ++ Q E P + A+ AG+ I + +P+EL+ D
Sbjct: 123 V-NKAAEKIQQADFIVAQLETPLETTKYAFEIAKQAGIKTILNPAPAVKNLPKELIQLTD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + EA + HKMGVQ V++ LG+KG + +G+
Sbjct: 182 VITPNETEAEILTGVTVVDDASMKEAAQRLHKMGVQTVIITLGSKG-VYYDDGD---VSG 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V IDTT AGDTF SF+ S +E + + A+SL VQ GA PS+P
Sbjct: 238 IVPAFKVHAIDTTAAGDTFLGSFSSELKPDLSNLKEAIMYGNKASSLAVQKMGAQPSIPT 297
Query: 367 RKSVL 371
RK VL
Sbjct: 298 RKEVL 302
>gi|398864549|ref|ZP_10620082.1| ribokinase [Pseudomonas sp. GM78]
gi|398244848|gb|EJN30382.1| ribokinase [Pseudomonas sp. GM78]
Length = 305
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 165/296 (55%), Gaps = 6/296 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L VG VG
Sbjct: 5 VVVVGSLNMDLVTRAPRLPRGGETLIGQSFATVCGGKGANQAVAAARLGAQVSMVGCVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+++ AL G+ ++ V+ +G A++++ + QN+I+IV G N + P
Sbjct: 65 DAYGQVLRQALLDEGIDCRAVSAVEG---SSGVALIVVDDNSQNAIVIVAGANGALTPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
G D V+++A +++ Q E+PD+ K R G VI + P+PQ+ ID
Sbjct: 122 LGCFD-AVLQEADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPQDWYASID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L+G+P DS + A + +MG +V++ LGA+GS LF +G K +
Sbjct: 181 YLIPNESEAATLSGLPVDSLQTAQIAATRLIEMGAGKVIITLGAQGS-LFADG-KGFEHF 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P+ + +DTT AGDTF FA V G S + +RF AA+L V GA PS+P
Sbjct: 239 PAPSVKALDTTAAGDTFVGGFAAALVAGMSEAQAIRFGQVAAALSVTRAGAQPSIP 294
>gi|303271219|ref|XP_003054971.1| ribokinase/xylose isomerase [Micromonas pusilla CCMP1545]
gi|226462945|gb|EEH60223.1| ribokinase/xylose isomerase [Micromonas pusilla CCMP1545]
Length = 721
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 177/322 (54%), Gaps = 21/322 (6%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAK--TSQTLAGGKGANQAACGAKLS---HPTYF 123
P+VV+GS N D+ V + R P V ETV A T T GGKGANQA A+LS P F
Sbjct: 34 PIVVIGSVNVDLTVRVARPPSVDETVLATSPTLTTAVGGKGANQAIAAARLSAGSRPVRF 93
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
VG+ G DA+ ++ L GV + V D +P+G VML DG S +++GG N
Sbjct: 94 VGRFGNDAHASVLETELRENGVDVSSCGHVDD--LPSGQGFVMLSPDGAASSVVIGGAN- 150
Query: 184 SCWPEKFGDEDL------EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMD 237
+ WP DE + V A +VLLQRE+P+ VN+ AKAA +A VPVI DAGG +
Sbjct: 151 TAWPS---DERTLRKLVTDAVHGAAVVLLQREVPERVNVAAAKAANAANVPVILDAGGAN 207
Query: 238 APIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
+ + LL ID L PNE+EL RLTGM T++ + + A K G +LV LG +GS
Sbjct: 208 TALSRTLLELIDYLCPNETELMRLTGMRTETDDDVVTAAKTLLKNGANHILVTLGGRGSV 267
Query: 298 LFVEGEKPIKQSI-IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLR---FAAAAASL 353
E + I +P V+D T AGD F A+ AV E S E R AAAA +
Sbjct: 268 SVSASEVKWHEPIAVPKNEVLDATAAGDAFRAAIAVSIAESGSGELTERGAKLAAAAGAC 327
Query: 354 CVQVKGAIPSMPDRKSVLNLLQ 375
V+V GA+PS+P R++ LL
Sbjct: 328 AVRVVGAMPSLPTREAADALLS 349
>gi|300811398|ref|ZP_07091894.1| ribokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497633|gb|EFK32659.1| ribokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 306
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 173/317 (54%), Gaps = 28/317 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + ++ PK GET+ A GGKGANQA AK + T F+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVENFPKPGETINAHKVSEAGGGKGANQAVAAAKSAAETIFISRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + + L+G GV+ DY V+ GV TGHA + L ++GQN III G N S
Sbjct: 64 DSYGSWMKEQLAGYGVKTDY--VLPTAGVKTGHAYITLNAEGQNDIIIDHGANYS----- 116
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+ +V++ A V+ Q E P K A++AG I + +P +LL
Sbjct: 117 LTEADVLAAKDVIEAADCVIAQLETPLEATTAAFKLAKAAGKVTILNPAPAIKDLPADLL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D+++PNE+E LT +P + + K H++GV+ V++ G+KG+ L P
Sbjct: 177 AVTDLITPNETESALLTSLPVVEEADLEKNAAKLHELGVKHVIITYGSKGAYL----SSP 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEG------KSREECLRFAAAAASLCVQV 357
+ ++PA +V +DTT AGDTF +GF+ G + E RFA A+SL VQ
Sbjct: 233 VFTGLVPAFKVKAVDTTAAGDTF-----LGFLAGSLASDFSNLHEAARFANRASSLAVQK 287
Query: 358 KGAIPSMPDRKSVLNLL 374
GA PS+PDR SV + L
Sbjct: 288 MGAQPSIPDRASVASAL 304
>gi|220930586|ref|YP_002507495.1| ribokinase [Clostridium cellulolyticum H10]
gi|220000914|gb|ACL77515.1| ribokinase [Clostridium cellulolyticum H10]
Length = 311
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 170/303 (56%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ V + +P++GET+ A + + GGKGANQA KL +G VG
Sbjct: 5 ILVIGSLNMDLVVNVKHMPQIGETLLADRLEFIPGGKGANQAYALGKLGADVTMLGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + D L GV D ++ + GV TG A++ + G NSII+V G N E
Sbjct: 65 DSYGDIQIDGLKAVGV--DTTHIARINGVNTGIALINVNEHGDNSIIVVQGANKYVSKE- 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D +L+V++++ IV+ Q EIP AK A+ G VI D +P ELL+ +D
Sbjct: 122 YIDRNLKVIEESDIVIFQLEIPIETVTYAAKKAKELGKTVILDPAPAPDDLPAELLSNVD 181
Query: 250 ILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE+EL +LTG+ DS IS+AV K GV+ V+V LG KGS FV + + +
Sbjct: 182 IIKPNETELVKLTGIEEVDSC--ISKAVDSIKKQGVKTVIVTLGGKGS--FVSAQNDVIK 237
Query: 309 SI-IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I +VIDTT AGD+F AS A+ +GK + FA AS+ V KGA SMP
Sbjct: 238 YISTQDVKVIDTTAAGDSFIASMALYLSKGKDIISAVEFANNVASISVTRKGAQSSMPSM 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|226314022|ref|YP_002773918.1| ribokinase [Brevibacillus brevis NBRC 100599]
gi|226096972|dbj|BAH45414.1| ribokinase [Brevibacillus brevis NBRC 100599]
Length = 300
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 167/301 (55%), Gaps = 18/301 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ + LPK GET+A+ + + GGKGANQA ++L +G VGE
Sbjct: 3 IAVVGSINMDLVTHVQHLPKAGETIASHHFELIPGGKGANQAVAASRLGAHVSMIGMVGE 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+++ L+ V ++ +K G TG A + + DG+N+I++V G N E
Sbjct: 63 DENGRVMLGGLTDAQVHIEG---IKCSGT-TGMAFINVSDDGENNIVLVPGANALVSTEH 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D +L ++K + +VLLQ EIP V K A G VI + AP + ELL
Sbjct: 119 IAD-NLSILKDSDVVLLQLEIPMPVVEYTVKEAARLGKLVILNP----APARELSSELLT 173
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ L+PNE+EL LTGMP + +++ A K G ++V+V LG KG+ L E
Sbjct: 174 HVHTLTPNETELSILTGMPVSTIDEVHAAAKKLLSGGPKRVIVTLGEKGALLITADEA-- 231
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IPA RV +DTT AGD+FTA+FAVG +G + E FA+ A++ V GA PS+
Sbjct: 232 --THIPAFRVEPVDTTAAGDSFTAAFAVGITQGMTETEAATFASKVAAIVVTRNGAQPSL 289
Query: 365 P 365
P
Sbjct: 290 P 290
>gi|422845231|ref|ZP_16891941.1| ribokinase [Lactobacillus delbrueckii subsp. lactis DSM 20072]
gi|325684569|gb|EGD26730.1| ribokinase [Lactobacillus delbrueckii subsp. lactis DSM 20072]
Length = 306
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 172/313 (54%), Gaps = 20/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + ++ PK GET+ A GGKGANQA AK + T F+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVENFPKPGETINAHKVSEAGGGKGANQAVAAAKSAAETIFISKVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + + L+G GV+ DY V+ G TGHA + L ++GQN III G N S
Sbjct: 64 DSYGSWMKEQLAGYGVKTDY--VLPTAGFKTGHAYITLNAEGQNDIIIDHGANYS----- 116
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+ +V++ A V+ Q E P K A++AG I + +P +LL
Sbjct: 117 LTEADVLAAKDVIEAADCVIAQLETPLEATTAAFKLAKAAGKVTILNPAPAIKDLPVDLL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D+++PNE+E LT +P + + K H++GV+ V++ G+KG+ L P
Sbjct: 177 AVTDLITPNETESALLTSLPVVEEADLEKNAAKLHELGVKHVIITYGSKGAYL----SSP 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFV--EGKSREECLRFAAAAASLCVQVKGAI 361
+ ++PA +V +DTT AGDTF F GF+ + + E RFA A+SL VQ GA
Sbjct: 233 VFTGLVPAFKVKAVDTTAAGDTFLG-FLAGFLASDFSNLHEAARFANRASSLAVQKMGAQ 291
Query: 362 PSMPDRKSVLNLL 374
PS+PDR SV + L
Sbjct: 292 PSIPDRASVASAL 304
>gi|113474683|ref|YP_720744.1| ribokinase [Trichodesmium erythraeum IMS101]
gi|110165731|gb|ABG50271.1| ribokinase [Trichodesmium erythraeum IMS101]
Length = 305
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 165/310 (53%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+++ GS N D+ RLP GET+ T GGKGANQA A L PT VG+VG
Sbjct: 3 IIIFGSVNIDLIATTPRLPTPGETINGNNFFTAGGGKGANQAVAAAGLGIPTKIVGRVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + +LS V D +V+ D TG AV+ + + G+N+II+V G N S
Sbjct: 63 DSFGQQLLVSLSTANV--DTTDVLVDENTHTGVAVIAVGASGENNIIVVPGANHS----- 115
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+E +K +LLQ EIP V I AK A+ GV VI D M A P +
Sbjct: 116 INNTDVERLKNLLSDVTALLLQLEIPVEVAISAAKVAQEMGVKVILDPAPMPANFPNDFY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVK-CHKMGVQQVLVKLGAKGSALFVEGEK 304
N IDI++PNE E +L G ++ E EA V+ CH+ GV+ +VK+G +G + E
Sbjct: 176 NLIDIITPNEIEASQLVGFEVNNQETAMEAAVELCHR-GVKNAVVKIGDRGVICATKEEA 234
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ + + + IDT AGD F A G S +E +++ AAA +LC GA P+M
Sbjct: 235 FFQPAFV--VKTIDTVAAGDAFNGGLAAALDTGLSLKEAVKWGAAAGALCTTKPGAQPAM 292
Query: 365 PDRKSVLNLL 374
PDRK+ N L
Sbjct: 293 PDRKTFDNFL 302
>gi|104773650|ref|YP_618630.1| ribokinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|116513644|ref|YP_812550.1| ribokinase family sugar kinase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815257|ref|YP_005851648.1| Ribokinase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418028999|ref|ZP_12667547.1| Ribokinase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
gi|103422731|emb|CAI97360.1| Ribokinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|116092959|gb|ABJ58112.1| Sugar kinase, ribokinase family [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325125294|gb|ADY84624.1| Ribokinase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354690717|gb|EHE90659.1| Ribokinase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
Length = 306
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 172/317 (54%), Gaps = 28/317 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + ++ PK GET+ A GGKG NQA AK + T F+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVENFPKPGETINAHKVSEAGGGKGGNQAVAAAKSAAETIFISRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + + L+G GV+ DY V+ GV TGHA + L ++GQN III G N S
Sbjct: 64 DSYGSWMKEQLAGYGVKTDY--VLPTAGVKTGHAYITLNAEGQNDIIIDHGANYS----- 116
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+ +V++ A V+ Q E P K A++AG I + +P +LL
Sbjct: 117 LTEADVLAAKDVIEAADCVIAQLETPLEATTAAFKLAKAAGKVTILNPAPAIKDLPADLL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D+++PNE+E LT +P + + K H++GV+ V++ G+KG+ L P
Sbjct: 177 AVTDLITPNETESALLTSLPVAEEADLEKNAAKLHELGVKHVIITYGSKGAYL----SSP 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEG------KSREECLRFAAAAASLCVQV 357
+ ++PA +V +DTT AGDTF +GF+ G + E RFA A+SL VQ
Sbjct: 233 VFTGLVPAFKVKAVDTTAAGDTF-----LGFLAGSLASDFSNLHEAARFANRASSLAVQK 287
Query: 358 KGAIPSMPDRKSVLNLL 374
GA PS+PDR SV + L
Sbjct: 288 MGAQPSIPDRASVASAL 304
>gi|388548221|ref|ZP_10151473.1| ribokinase [Pseudomonas sp. M47T1]
gi|388273667|gb|EIK93277.1| ribokinase [Pseudomonas sp. M47T1]
Length = 306
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 166/307 (54%), Gaps = 7/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ RLP+ GETV + T+ GGKGANQA A+L PT +G VG+
Sbjct: 5 VVVVGSLNMDLVTRAQRLPQPGETVVGNSFATVPGGKGANQAVAAARLGAPTAMIGCVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D VV GV +G A++++ QN+I+IV G N ++
Sbjct: 65 DAYGAQLRQALLDEGI--DGQAVVTAAGVSSGVALIVVDEASQNTIVIVAGGNGEVSAQR 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D ++++A +++ Q E+P D+V + K R+ G VI + + AP+P + I
Sbjct: 123 VQQAD-ALLQQADVIVCQLEVPLDTVAFTL-KRGRALGKTVILNPAPVSAPLPADWYRAI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNESE LTG+ DS +A H G +V++ LGA+GS LF EG + +
Sbjct: 181 DYLIPNESEAFALTGVRVDSLHSAQQAATHLHAQGAGKVIITLGAQGS-LFAEGGR-FQH 238
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P + +DTT AGDTF +FA G+ + + F AA+L V GA PS+P
Sbjct: 239 FPAPVVKAVDTTAAGDTFVGAFAAALARGEHELQAIAFGQVAAALSVTRAGAQPSIPYLA 298
Query: 369 SVLNLLQ 375
V +Q
Sbjct: 299 DVTGFVQ 305
>gi|358061555|ref|ZP_09148209.1| ribokinase [Clostridium hathewayi WAL-18680]
gi|356700314|gb|EHI61820.1| ribokinase [Clostridium hathewayi WAL-18680]
Length = 308
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 175/303 (57%), Gaps = 8/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQA-ACGAKLSHPTYFVGQVG 128
++V+GS N D V + P GETV +++ Q + GGKGANQA ACG KL T FV +G
Sbjct: 4 ILVIGSTNIDFVVNVVDFPVAGETVMSQSFQKMPGGKGANQAYACG-KLGGDTAFVSVIG 62
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D G L L GV +D + G PTG A + + G N II+V G N +C E
Sbjct: 63 DDGLGDLAMKNLKDAGVNIDSVKTAP--GTPTGMAQISIDHSGNNCIIVVPGANSACNQE 120
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNF 247
F +E + + I+L+Q E P + ++ + A+ AG VI + A + P+P+EL N
Sbjct: 121 -FIEEIYDRIDACDILLIQMETPLAGVLKAIQRAKQAGKTVILNPAPVPEEPLPEELFNG 179
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+ L+PNE+ELG+LTGMP D++E++ A K ++GV+ V+V LG KG+A F+ E +
Sbjct: 180 LTYLTPNETELGKLTGMPVDTFEEVCAAARKLLELGVEHVIVTLGEKGAA-FINRETEVL 238
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+DTT AGDTF A+ AV K+ E+ +RFA A+ + V +GA PS+P R
Sbjct: 239 YE-TRKVEAVDTTAAGDTFNAAIAVFLSHAKTIEQAIRFANLASGISVTRQGAQPSVPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|300362084|ref|ZP_07058261.1| ribokinase [Lactobacillus gasseri JV-V03]
gi|300354703|gb|EFJ70574.1| ribokinase [Lactobacillus gasseri JV-V03]
Length = 307
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 170/309 (55%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 4 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + GV +D++ V + TG A ++LQ GQNSIII G N E
Sbjct: 64 DDNGRFMLEQFKDNGVNVDHVTVTPNE--QTGQAYILLQESGQNSIIIQHGANFDVTAED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR+AG I + IP+ELL D
Sbjct: 122 VRNAK-DQIEDSDFVIAQFETPLEATIEAFKIARAAGKTTILNPAPARTDIPKELLELTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ H+MG++ V++ +G +GS + E +
Sbjct: 181 LITPNETEAESITGIKVDSEESMKKSSEVFHQMGIKGVIITIGERGSYVSYED----IEE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S ++ + +A+ ++S VQ GA PS+P
Sbjct: 237 IIPAFKVKAVDTTAAGDTFLGALSSELKPDLSNLKDSVVYASKSSSFTVQKLGAFPSIPT 296
Query: 367 RKSVLNLLQ 375
R V L+
Sbjct: 297 RDVVEQALK 305
>gi|398961511|ref|ZP_10678760.1| ribokinase [Pseudomonas sp. GM30]
gi|398152350|gb|EJM40870.1| ribokinase [Pseudomonas sp. GM30]
Length = 305
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 161/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLPK GET+ + T++GGKGANQA A+L VG
Sbjct: 2 PANVVVIGSLNMDLVTRAPRLPKGGETLIGHSFATVSGGKGANQAVAAARLGAQVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG D G + DAL + ++ V+D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDDYGVQLRDALLAEQIDCQAVSTVEDS---SGVALIVVDDNSQNAIVIVAGANGAMT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q EIPD+ K AR+ G VI + P+P +
Sbjct: 119 PAVIDRFD-AVLQAADVIICQLEIPDATVGHALKRARALGKTVILNPAPASRPLPADWFA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS + A + MG +V++ LGA+GS LF G K
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLQSAESAANQLIAMGAGKVIITLGAQGS-LFANG-KGF 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GKS E +R+ AA+L V GA PS+P
Sbjct: 236 EHFPAPKVQAVDTTAAGDTFVGGFAAALASGKSEAEAIRYGQIAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 MSDV 299
>gi|58336913|ref|YP_193498.1| ribokinase [Lactobacillus acidophilus NCFM]
gi|58254230|gb|AAV42467.1| ribokinase [Lactobacillus acidophilus NCFM]
Length = 307
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 164/312 (52%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T AGGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINATEITTAAGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ GV TGHA + L GQN+I+I G N E
Sbjct: 64 DSEGGYITHQLKSYGVDTTYVQTTM--GVKTGHAYITLNEAGQNNIVIDHGANYELTVED 121
Query: 190 F---GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
GD ++K ++ Q E P V K A+ AG I + IP+ELL
Sbjct: 122 IKAAGD----LIKSWDCIIAQFETPIEVTTAAFKMAKKAGKITILNPAPAVEEIPEELLK 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ DI++PNE+E ++TG+ ++ K H +GV+ V++ G KGS + K I
Sbjct: 178 YTDIITPNETESAKITGIQIKDKSSLAANAEKLHLLGVKNVVITYGDKGSYI---STKDI 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+++IPA +V DTTGAGDTF A E S E+ + A+ A+S+ VQ GA PS
Sbjct: 235 -ETLIPAYKVEATDTTGAGDTFIGYLASNLNEDLSNFEDAAKIASRASSIAVQRLGAQPS 293
Query: 364 MPDRKSVLNLLQ 375
+P + V ++
Sbjct: 294 IPTAQEVEQAME 305
>gi|227903471|ref|ZP_04021276.1| ribokinase [Lactobacillus acidophilus ATCC 4796]
gi|227868791|gb|EEJ76212.1| ribokinase [Lactobacillus acidophilus ATCC 4796]
Length = 326
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 164/312 (52%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T AGGKGANQA AK TYF+ +VGE
Sbjct: 23 IVVIGSSNVDTTLHVKDFPKPGETINATEITTAAGGKGANQAIAAAKSGAETYFINRVGE 82
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ GV TGHA + L GQN+I+I G N E
Sbjct: 83 DSEGGYITHQLKSYGVDTTYVQTTM--GVKTGHAYITLNEAGQNNIVIDHGANYELTVED 140
Query: 190 F---GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
GD ++K ++ Q E P V K A+ AG I + IP+ELL
Sbjct: 141 IKAAGD----LIKSWDCIIAQFETPIEVTTAAFKMAKKAGKITILNPAPAVEEIPEELLK 196
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ DI++PNE+E ++TG+ ++ K H +GV+ V++ G KGS + K I
Sbjct: 197 YTDIITPNETESAKITGIQIKDKSSLAANAEKLHLLGVKNVVITYGDKGSYI---STKDI 253
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+++IPA +V DTTGAGDTF A E S E+ + A+ A+S+ VQ GA PS
Sbjct: 254 -ETLIPAYKVEATDTTGAGDTFIGYLASNLNEDLSNFEDAAKIASRASSIAVQRLGAQPS 312
Query: 364 MPDRKSVLNLLQ 375
+P + V ++
Sbjct: 313 IPTAQEVEQAME 324
>gi|418035363|ref|ZP_12673820.1| Ribokinase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|354690352|gb|EHE90300.1| Ribokinase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
Length = 306
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 170/314 (54%), Gaps = 22/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + ++ PK GET+ A GGKG NQA AK + T F+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVENFPKPGETINAHKVSEAGGGKGGNQAVAAAKSAAETIFISRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW-PE 188
D+ G + + L+G GV+ DY V+ GV TGHA + L ++GQN III G N S +
Sbjct: 64 DSYGSWMKEQLAGYGVKTDY--VLPTAGVKTGHAYITLNAEGQNDIIIDHGANYSLTEAD 121
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+D V++ A V+ Q E P K A++AG I + +P +LL
Sbjct: 122 VLAAKD--VIEAADCVIAQLETPLEATTAAFKLAKAAGKVTILNPAPAIKDLPADLLAVT 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D+++PNE+E LT +P + + K H++GV+ V++ G+KG+ L P+
Sbjct: 180 DLITPNETESALLTSLPVAEEADLEKNAAKLHELGVKHVIITYGSKGAYL----SSPVFT 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEG------KSREECLRFAAAAASLCVQVKGA 360
++PA +V +DTT AGDTF +GF+ G + E RFA A+SL VQ G
Sbjct: 236 GLVPAFKVKAVDTTAAGDTF-----LGFLAGSLASDFSNLHEAARFANRASSLAVQKMGG 290
Query: 361 IPSMPDRKSVLNLL 374
PS+PDR SV + L
Sbjct: 291 QPSIPDRASVASAL 304
>gi|313123240|ref|YP_004033499.1| sugar kinase, ribokinase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279803|gb|ADQ60522.1| Sugar kinase, ribokinase family [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 306
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 171/317 (53%), Gaps = 28/317 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + ++ PK GET+ A GGKGANQA AK + T F+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVENFPKPGETINAHKVSEAGGGKGANQAVAAAKSAAETIFISKVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + + L+G GV+ DY V+ G TGHA + L ++GQN III G N S
Sbjct: 64 DSYGSWMKEQLAGYGVKTDY--VLPTAGFKTGHAYITLNAEGQNDIIIDHGANYS----- 116
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+ +V++ A V+ Q E P K A++AG I + +P +LL
Sbjct: 117 LTEADVLAAKDVIEAADCVIAQLETPLEATTAAFKLAKAAGKVTILNPAPAIKDLPVDLL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D+++PNE+E LT +P + + K H++GV+ V++ G KG+ L P
Sbjct: 177 AVTDLITPNETESALLTSLPVVEEADLEKNAAKLHELGVKHVIITYGNKGAYL----SSP 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEG------KSREECLRFAAAAASLCVQV 357
+ ++PA +V +DTT AGDTF +GF+ G + E RFA A+SL VQ
Sbjct: 233 VFTGLVPAFKVKAVDTTAAGDTF-----LGFLAGSLASDFSNLHEAARFANRASSLSVQK 287
Query: 358 KGAIPSMPDRKSVLNLL 374
GA PS+PDR SV + L
Sbjct: 288 MGAQPSIPDRASVASAL 304
>gi|116629219|ref|YP_814391.1| ribokinase family sugar kinase [Lactobacillus gasseri ATCC 33323]
gi|116094801|gb|ABJ59953.1| Sugar kinase, ribokinase family [Lactobacillus gasseri ATCC 33323]
Length = 308
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 169/309 (54%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 5 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + GV ++++ V + TG A ++LQ GQNSIII G N
Sbjct: 65 DDNGRFMLEQFKDNGVNVEHVTVTPNE--QTGQAYILLQESGQNSIIIQHGANFDVTAAD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR+AG I + IP+ELL D
Sbjct: 123 VRNAKSQ-IEDSDFVIAQFETPLEATIEAFKIARAAGKTTILNPAPARTDIPKELLELTD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ HKMG++ V++ +G +GS + E +
Sbjct: 182 LITPNETEAESITGIKVDSEESMKKSSELFHKMGIKGVIITIGERGSYVSYED----IEE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S +E + +A+ ++S VQ GA PS+P
Sbjct: 238 IIPAFKVKAVDTTAAGDTFLGALSSELKPDLSNLKESVVYASKSSSFTVQKLGAFPSIPT 297
Query: 367 RKSVLNLLQ 375
R V L+
Sbjct: 298 RDVVEQALK 306
>gi|408410638|ref|ZP_11181844.1| Ribokinase [Lactobacillus sp. 66c]
gi|408410859|ref|ZP_11182056.1| Ribokinase [Lactobacillus sp. 66c]
gi|407874966|emb|CCK83862.1| Ribokinase [Lactobacillus sp. 66c]
gi|407875187|emb|CCK83650.1| Ribokinase [Lactobacillus sp. 66c]
Length = 307
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 171/308 (55%), Gaps = 18/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + ++ PK GET+ A+ GGKGANQA AK T+F+ +VG+
Sbjct: 4 IVVLGSSNVDTTLHVENFPKPGETINAQKVTEAGGGKGANQAVAAAKSGSETHFISRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + D L+G GV D V+K GV TGHA + L S+GQN III G N P
Sbjct: 64 DALGTWMLDQLTGYGVLTD--RVLKTEGVKTGHAYITLNSEGQNDIIIDHGANYELTP-- 119
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+D+E V++ A V+ Q E P I K A++AG I + +P+ELL
Sbjct: 120 ---KDVEGAKAVIEDADCVIAQLETPIDATIAAFKIAKAAGKTTILNPAPAIKDLPKELL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ D+++PNE+E LTG+ + + VK H++G++ V++ G+KG+ + P
Sbjct: 177 DLTDVITPNETESALLTGITISGDADLEKNAVKLHELGLKYVIITYGSKGAYV----SSP 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEG-KSREECLRFAAAAASLCVQVKGAIP 362
+ ++PA +V +DTT AGDTF A G + + FA A+SL VQ GA P
Sbjct: 233 VFTGLVPAFKVKAVDTTAAGDTFLGFLAGGLASDLGNLHDATVFACRASSLAVQKLGAQP 292
Query: 363 SMPDRKSV 370
S+PDR +V
Sbjct: 293 SIPDRAAV 300
>gi|238853911|ref|ZP_04644274.1| ribokinase [Lactobacillus gasseri 202-4]
gi|311111006|ref|ZP_07712403.1| ribokinase [Lactobacillus gasseri MV-22]
gi|420147540|ref|ZP_14654816.1| Ribokinase [Lactobacillus gasseri CECT 5714]
gi|238833497|gb|EEQ25771.1| ribokinase [Lactobacillus gasseri 202-4]
gi|311066160|gb|EFQ46500.1| ribokinase [Lactobacillus gasseri MV-22]
gi|398401541|gb|EJN55043.1| Ribokinase [Lactobacillus gasseri CECT 5714]
Length = 307
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 169/309 (54%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 4 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + GV ++++ V + TG A ++LQ GQNSIII G N
Sbjct: 64 DDNGRFMLEQFKDNGVNVEHVTVTPNE--QTGQAYILLQESGQNSIIIQHGANFDVTAAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR+AG I + IP+ELL D
Sbjct: 122 VRNAKSQ-IEDSDFVIAQFETPLEATIEAFKIARAAGKTTILNPAPARTDIPKELLELTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ HKMG++ V++ +G +GS + E +
Sbjct: 181 LITPNETEAESITGIKVDSEESMKKSSELFHKMGIKGVIITIGERGSYVSYED----IEE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S +E + +A+ ++S VQ GA PS+P
Sbjct: 237 IIPAFKVKAVDTTAAGDTFLGALSSELKPDLSNLKESVVYASKSSSFTVQKLGAFPSIPT 296
Query: 367 RKSVLNLLQ 375
R V L+
Sbjct: 297 RDVVEQALK 305
>gi|312961951|ref|ZP_07776448.1| ribokinase [Pseudomonas fluorescens WH6]
gi|311283761|gb|EFQ62345.1| ribokinase [Pseudomonas fluorescens WH6]
Length = 304
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 162/300 (54%), Gaps = 8/300 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ +T T+ GGKGANQA A+L +G
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRAGETLIGQTFSTVPGGKGANQAVASARLGAEVAMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL G+ ++ V DG +G A++++ QN+I+IV G+N
Sbjct: 62 VGTDAYGAQLRDALRVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
P D V++ A +++ Q E+P D+V + K R G VI + P+P E
Sbjct: 119 PASLQAFD-AVLQAAQVIVCQLEVPMDTVGYAL-KRGRELGKTVILNPAPASGPLPAEWY 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
ID L PNESE L+G+ DS + A + K G +V++ LGA+G ALF +G+
Sbjct: 177 ALIDYLIPNESEATALSGVTVDSLDSAKRAATELIKAGAGKVIITLGAQG-ALFADGQG- 234
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+Q + P + +DTT AGDTF F GKS E +RF AA+L V GA PS+P
Sbjct: 235 FEQLVAPKVQAVDTTAAGDTFVGGFCAALANGKSEAEAIRFGQVAAALSVTRAGAQPSIP 294
>gi|282850995|ref|ZP_06260369.1| ribokinase [Lactobacillus gasseri 224-1]
gi|282557947|gb|EFB63535.1| ribokinase [Lactobacillus gasseri 224-1]
Length = 312
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 169/309 (54%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 9 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 68
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + GV ++++ V + TG A ++LQ GQNSIII G N
Sbjct: 69 DDNGRFMLEQFKDNGVNVEHVTVTPNE--QTGQAYILLQESGQNSIIIQHGANFDVTAAD 126
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR+AG I + IP+ELL D
Sbjct: 127 VRNAKSQ-IEDSDFVIAQFETPLEATIEAFKIARAAGKTTILNPAPARTDIPKELLELTD 185
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ HKMG++ V++ +G +GS + E +
Sbjct: 186 LITPNETEAESITGIKVDSEESMKKSSELFHKMGIKGVIITIGERGSYVSYED----IEE 241
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S +E + +A+ ++S VQ GA PS+P
Sbjct: 242 IIPAFKVKAVDTTAAGDTFLGALSSELKPDLSNLKESVVYASKSSSFTVQKLGAFPSIPT 301
Query: 367 RKSVLNLLQ 375
R V L+
Sbjct: 302 RDVVEQALK 310
>gi|331701094|ref|YP_004398053.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
gi|329128437|gb|AEB72990.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
Length = 305
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 169/309 (54%), Gaps = 21/309 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D + ID++PK GET++AK+ AGGKGANQA A+ T F+GQVG+
Sbjct: 5 VVVLGSLNVDTTLHIDQMPKPGETISAKSKTNSAGGKGANQAVAAARSGAQTSFIGQVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG + DAL G+ D++ + + G TG AV++L S GQNSI++ GG N + E
Sbjct: 65 DSNGIFMIDALKLDGINTDHVGINQVDG--TGSAVILLDSQGQNSIMVYGGANQAMKTEV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
D ++K A I++ + E P V + K A+ GV I + P P L
Sbjct: 123 IADSQ-ALIKSADILISEFETPQEVTYEAFKLAKQHGVTTILN------PAPASKIIYGL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L D++ PNE+E LTG+ + + + + K +MG+ +++ +G +G+
Sbjct: 176 LEVTDLIVPNETESATLTGIEVNDTDSMDQNAAKFSEMGIDNLIITVGDRGAYY----HT 231
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAI 361
P +PA +V DTT AGDTF +F+ + S E L +A A+S+ VQ GA+
Sbjct: 232 PSNSGFVPAFKVKAKDTTAAGDTFIGAFSSQINQDLSNIEAALVYAQKASSITVQRLGAL 291
Query: 362 PSMPDRKSV 370
PS+P + +
Sbjct: 292 PSIPTAEEI 300
>gi|315037822|ref|YP_004031390.1| ribokinase [Lactobacillus amylovorus GRL 1112]
gi|325956297|ref|YP_004286907.1| ribokinase [Lactobacillus acidophilus 30SC]
gi|312275955|gb|ADQ58595.1| ribokinase [Lactobacillus amylovorus GRL 1112]
gi|325332862|gb|ADZ06770.1| ribokinase [Lactobacillus acidophilus 30SC]
Length = 308
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 158/309 (51%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINATDVTTAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D++G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 64 DSDGGYITHQLKSYGVDTTYVQTTM--GAKTGHAYITLNEAGQNDIIIDHGANYELTVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++ ++ Q E P V K A+ AG I + IP +LL + D
Sbjct: 122 LKAAS-DLINNWDCIIAQFETPIDVTTSAFKMAKKAGKVTILNPAPAIDKIPADLLKYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E ++TG+P ++ K H +GV+ V++ G KG+ + P ++
Sbjct: 181 IIMPNETESAKITGIPIKDNSTLATNAEKLHLLGVKNVIITYGDKGAYI----STPDVET 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V DTTGAGDTF FA S EE + A+ A+S+ VQ GA PS+P
Sbjct: 237 LVPAYKVDATDTTGAGDTFIGYFASNLNADMSNFEEAAKIASRASSIAVQRLGAQPSIPT 296
Query: 367 RKSVLNLLQ 375
+ V ++
Sbjct: 297 EQEVKQAME 305
>gi|395244283|ref|ZP_10421253.1| Ribokinase [Lactobacillus hominis CRBIP 24.179]
gi|394483482|emb|CCI82261.1| Ribokinase [Lactobacillus hominis CRBIP 24.179]
Length = 307
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 168/309 (54%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ T FVG+VG
Sbjct: 4 VTIVGSINVDNILHIKKLPQPGETIAMTEFSKAAGGKGANQAVASSRADSKTVFVGRVGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + G+ +D++ V ++ TG A ++LQ GQNSIII G N
Sbjct: 64 DDNGRYMLNQFKDNGINIDHVAVTENQ--QTGQAYILLQESGQNSIIIQHGANFDVSASD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E + ++ + V+ Q E P I+ K AR+AG I + + IP ELL D
Sbjct: 122 VR-EAQDQIEDSDFVIAQFETPLDAIIEAFKIARNAGKATILNPAPARSDIPDELLKLTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E+ +TG+ + +A K H+MGV+ V++ +G KGS + E +
Sbjct: 181 LITPNETEVQSITGIEVVDEASMKKAADKLHEMGVKGVIITVGEKGSYVSYED----LEQ 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + A S +E + +A+ ++S VQ GA PS+P
Sbjct: 237 IIPAFKVKAVDTTAAGDTFIGALASELKPDLSNLKESIIYASKSSSFTVQKLGAFPSIPS 296
Query: 367 RKSVLNLLQ 375
RK V L+
Sbjct: 297 RKIVEQALK 305
>gi|406026591|ref|YP_006725423.1| ribokinase [Lactobacillus buchneri CD034]
gi|405125080|gb|AFR99840.1| ribokinase [Lactobacillus buchneri CD034]
Length = 305
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 169/309 (54%), Gaps = 21/309 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D + ID++PK GET++AK+ AGGKGANQA A+ T F+GQVG+
Sbjct: 5 VVVLGSLNVDTTLHIDQMPKPGETISAKSKTNSAGGKGANQAVAAARSGAQTSFIGQVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG + DAL G+ D++ + + G TG AV++L S GQNSI++ GG N + E
Sbjct: 65 DSNGIFMIDALKLDGINTDHVGINQVDG--TGSAVILLDSQGQNSIMVYGGANQAMKTEV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
D ++K A I++ + E P V + K A+ GV I + P P L
Sbjct: 123 IADSQ-ALIKSADILISEFETPQEVTYEAFKLAKQHGVTTILN------PAPASKIIYGL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L D++ PNE+E LTG+ + + + + K +MG+ +++ +G +G+
Sbjct: 176 LEVTDLIVPNETESATLTGIEVNDTDSMDQNAAKFSEMGIDNLIITVGDRGAYYHT---- 231
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAI 361
P +PA +V DTT AGDTF +F+ + S E L +A A+S+ VQ GA+
Sbjct: 232 PSDSGFVPAFKVKAKDTTAAGDTFIGAFSSQIDKDLSNIEAALVYAQKASSITVQRLGAL 291
Query: 362 PSMPDRKSV 370
PS+P + +
Sbjct: 292 PSIPTAEEI 300
>gi|385817178|ref|YP_005853568.1| ribokinase [Lactobacillus amylovorus GRL1118]
gi|327183116|gb|AEA31563.1| ribokinase [Lactobacillus amylovorus GRL1118]
Length = 308
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 158/309 (51%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINATDVTTAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D++G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 64 DSDGGYITHQLKSYGVDTTYVQTTI--GAKTGHAYITLNEAGQNDIIIDHGANYELTVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++ ++ Q E P V K A+ AG I + IP +LL + D
Sbjct: 122 LKAAS-DLINNWDCIIAQFETPIDVTTSAFKMAKKAGKVTILNPAPAIDKIPADLLKYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E ++TG+P ++ K H +GV+ V++ G KG+ + P ++
Sbjct: 181 IIMPNETESAKITGIPIKDNSTLATNAEKLHLLGVKNVIITYGDKGAYI----STPDVET 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V DTTGAGDTF FA S EE + A+ A+S+ VQ GA PS+P
Sbjct: 237 LVPAYKVDATDTTGAGDTFIGYFASNLNADMSNFEEAAKIASRASSIAVQRLGAQPSIPT 296
Query: 367 RKSVLNLLQ 375
+ V ++
Sbjct: 297 EQEVKQAME 305
>gi|253573975|ref|ZP_04851317.1| ribokinase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846452|gb|EES74458.1| ribokinase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 312
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 168/298 (56%), Gaps = 7/298 (2%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N DI VE + P+VGET+ + + + GGKGANQA A+L T +G V
Sbjct: 4 PKVAVIGSLNMDIVVETRQHPQVGETLLGEQIRFIPGGKGANQAVAAARLGAETAMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
GEDA G+ + +AL GV D V + G TG A + + ++G NSI++V G N P
Sbjct: 64 GEDAFGRELLEALRQDGV--DISGVKRLPGCTTGVASIYV-AEGDNSIVVVPGANYRVSP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E DE+ + +++A IVLLQ EIP A+ A+S G V+ + P+P EL +
Sbjct: 121 EDI-DENEDKLRRADIVLLQLEIPVDTVFYAAQKAKSLGKTVVLNPAPAQ-PLPPELFGY 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+D ++PN +EL R TGM D + ++ A+ + +M + ++ LGA GSA E + ++
Sbjct: 179 VDYVTPNRTELSRYTGMDADGTKLVA-AMRRMKEMEAKHIITTLGADGSAYLTE-DGEVR 236
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+V+DTTGAGD + A AV +G+S E + +AA ++L V GA MP
Sbjct: 237 TVPGHQVKVVDTTGAGDCYNAGLAVSLAKGRSLREAVEYAALVSALAVTKFGAQAGMP 294
>gi|227893090|ref|ZP_04010895.1| ribokinase [Lactobacillus ultunensis DSM 16047]
gi|227865068|gb|EEJ72489.1| ribokinase [Lactobacillus ultunensis DSM 16047]
Length = 310
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 157/309 (50%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 6 IVVIGSSNVDTTLHVKDFPKPGETINALEVSTAGGGKGANQAIAAAKSGAETYFINRVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQN I+I G N E
Sbjct: 66 DSEGGFITHQLKSYGVDTTYVQTTM--GSKTGHAFITLNEAGQNDIVIDHGANYELTVED 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++ V+ Q E P V I K A+ AG I + IP ELL + D
Sbjct: 124 IQAAS-DLITSWDCVIAQFETPIEVTIAAFKMAKKAGKITILNPAPAVDKIPDELLKYTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E +LTG+P ++ K H +GV+ V++ G KG+ + +
Sbjct: 183 IITPNETESAKLTGIPIKDKSTLATNAEKLHLLGVKNVVITYGDKGAYISTAD----VEE 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V DTTGAGDTF A S EE + A+ A+S+ VQ GA PS+P
Sbjct: 239 LVPAYKVKATDTTGAGDTFIGYLASNLNADLSNFEEAAKIASRASSIAVQRLGAQPSIPT 298
Query: 367 RKSVLNLLQ 375
K V N ++
Sbjct: 299 AKEVENAME 307
>gi|88855385|ref|ZP_01130049.1| ribokinase [marine actinobacterium PHSC20C1]
gi|88815292|gb|EAR25150.1| ribokinase [marine actinobacterium PHSC20C1]
Length = 304
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 179/314 (57%), Gaps = 25/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGSAN D + ++R+P GETV + T GGKG NQA A+ T F+G VG
Sbjct: 4 IVVVGSANIDQVLRVERIPSPGETVLSHGLSTALGGKGQNQAVAAARAGVATTFIGAVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ LS + + ++ PTG A++ + G+N+II+ G N
Sbjct: 64 DGFGEMVRAGLSCDAIDVSHLKTTDK---PTGTALIAVDGTGENTIIVEAGANTDVA--N 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI---PQELLN 246
++D+ + A +++Q EIP + A+ AR+AG VI +A API P+ELL+
Sbjct: 119 LTNDDVAAISSASALVMQLEIPRDTVTEAARIARAAGTQVILNA----APIQVLPRELLD 174
Query: 247 FIDILSPNE---SELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+D+L NE +EL R + + E + E ++ + V+V LG+KG++L EG
Sbjct: 175 NVDVLIVNEHEAAELARDNDLAPE-LEGLGERLLAL----IPTVIVTLGSKGASLHREGS 229
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+P+ ++PA RV +D TGAGDTF +FA G VEG ++ LRFA AAAS+ V+ GA+
Sbjct: 230 QPV---MVPAHRVTAVDATGAGDTFCGAFAAGLVEGMEADDALRFAGAAASISVENHGAV 286
Query: 362 PSMPDRKSVLNLLQ 375
PS+P R+++ L+
Sbjct: 287 PSIPYREAIETRLK 300
>gi|145353316|ref|XP_001420964.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357447|ref|XP_001422930.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581200|gb|ABO99257.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583174|gb|ABP01289.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 356
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 172/325 (52%), Gaps = 19/325 (5%)
Query: 68 PPLVVVGSANFDIYVEI-DRLPKVGETVAAKTS--QTLAGGKGANQAACGAKLS----HP 120
+ VVGS N D+ + +P+ GET AA + + GGKGANQA ++L+
Sbjct: 30 ASIAVVGSVNADVIARVGTSVPRRGETRAATAARVERACGGKGANQAVAASRLTCERGGK 89
Query: 121 TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180
FVG+ GED G + AL + + + G+ TG VML DG S ++VGG
Sbjct: 90 AAFVGRFGEDEAGTTLRRALRRETDVSGSVTMARGSGIETGMGFVMLTDDGSPSAVVVGG 149
Query: 181 TNMSCW---PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGV-PVIFDAGGM 236
N W E E E ++ A V+LQRE+P+ VN+ A AR GV ++ DAGG
Sbjct: 150 ANALGWNADDEALASEFREALRGAKTVMLQREVPERVNVIAATVAREIGVRTIVLDAGGS 209
Query: 237 DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM--GVQQV--LVKLG 292
+ LL +D ++PNESEL + GM + EAVVK ++ G +V L LG
Sbjct: 210 FHAADEALLALVDYVAPNESELAGMAGMRVEEVSSGDEAVVKAARIVAGTSRVAVLCTLG 269
Query: 293 AKGSALFVEGEK--PIKQSIIPA-ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAA 349
++GS L V GE ++ +PA A+ +D T AGD F A+FAV E K+ + ++FA+A
Sbjct: 270 SRGS-LLVRGEDVTRVESMELPAGAKEVDATAAGDAFRAAFAVAMAENKNERDAMKFASA 328
Query: 350 AASLCVQVKGAIPSMPDRKSVLNLL 374
A +L V GA+PS+P R V L
Sbjct: 329 AGALAVTKLGAMPSLPFRSDVDEFL 353
>gi|227890352|ref|ZP_04008157.1| possible ribokinase [Lactobacillus johnsonii ATCC 33200]
gi|227849166|gb|EEJ59252.1| possible ribokinase [Lactobacillus johnsonii ATCC 33200]
Length = 308
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 169/309 (54%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 4 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + G+ +D++ + + TG A ++LQ GQNSIII G N E
Sbjct: 64 DDNGRFMLEQFKENGINVDHVAITPNQ--QTGQAYILLQETGQNSIIIQHGANFDVTAED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR AG I + IP+ELL D
Sbjct: 122 VRNAKSQ-IEDSDFVIAQFETPIEATIEAFKIAREAGKITILNPAPARTDIPEELLELTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ H+MG++ V++ +G +GS + E +
Sbjct: 181 LITPNETEAESITGIKVDSEESMKKSSEIFHQMGIKGVIITIGERGSYVSYED----IEE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S + + +A+ ++S VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFLGALSSELKPDLSNLRDSVIYASKSSSFTVQKLGAFPSIPT 296
Query: 367 RKSVLNLLQ 375
R+ V L+
Sbjct: 297 REVVEEALK 305
>gi|42518722|ref|NP_964652.1| ribokinase [Lactobacillus johnsonii NCC 533]
gi|41583008|gb|AAS08618.1| ribokinase [Lactobacillus johnsonii NCC 533]
Length = 308
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 170/312 (54%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 4 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + G+ +D++ V + TG A ++LQ GQNSIII G N E
Sbjct: 64 DDNGRFMLEQFKENGINVDHVAVTPNQ--QTGQAYILLQETGQNSIIIQHGANFDVTAED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR AG I + IP+ELL D
Sbjct: 122 VRNAKSQ-IEDSDFVIAQFETPIEATIEAFKIAREAGKITILNPAPARTDIPEELLELTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ H+MG++ V++ +G +GS + E +
Sbjct: 181 LITPNETEAESITGIKVDSEESMKKSSEIFHQMGIKGVIITIGERGSYVSYED----IEE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLR----FAAAAASLCVQVKGAIPS 363
I+PA +V +DTT AGDTF + + E K LR +A+ ++S VQ GA PS
Sbjct: 237 IVPAFKVKAVDTTAAGDTFLGALS---SELKPDLSNLRDGVIYASKSSSFTVQKLGAFPS 293
Query: 364 MPDRKSVLNLLQ 375
+P R+ V L+
Sbjct: 294 IPTREVVEEALK 305
>gi|358064695|ref|ZP_09151257.1| ribokinase [Clostridium hathewayi WAL-18680]
gi|356697030|gb|EHI58627.1| ribokinase [Clostridium hathewayi WAL-18680]
Length = 307
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 164/307 (53%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+++ GS N DI + + R+P +GETV + GGKGANQA +L T +G VG+
Sbjct: 5 ILIAGSLNMDIVINMSRMPVIGETVFGDGLAYIPGGKGANQACAAGRLGGHTLMLGCVGQ 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + +L+ CGV D + + G PTG A + + S G NSI+++ G N C +
Sbjct: 65 DDFGSTLKQSLADCGV--DSEKIRRTAG-PTGTASIYVNSSGDNSIVVIPGANHDCDVDY 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D E ++ VLLQ EIP + A+ G VI + +P+E+L ID
Sbjct: 122 LKEMD-EAFRQCTYVLLQMEIPMEAVCYAIRRAKELGKVVILNPAPAPDFLPEEILPMID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE+EL +LT + + I E + +G++ V+V +G +GS L E +
Sbjct: 181 YLTPNETELMKLTNQSGEDMDSIREGACRLCGLGIKNVIVTMGKQGSMLVSGNEA----A 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ PA +V +DTT AGD F +F V EGK +E +RFA A+S+ V GA S+P R
Sbjct: 237 MFPARKVVSVDTTAAGDCFNGAFVVALSEGKPVDEAIRFANLASSVAVTRDGAQKSLPSR 296
Query: 368 KSVLNLL 374
+ V +L
Sbjct: 297 EEVEQIL 303
>gi|227509416|ref|ZP_03939465.1| ribokinase [Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227191128|gb|EEI71195.1| ribokinase [Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 305
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 169/304 (55%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D + I ++PK GET++A++ AGGKGANQA A+ T F+GQVGE
Sbjct: 5 VVVLGSLNVDTTLHIAQMPKPGETISAQSKTNSAGGKGANQAVAAARSHAQTSFIGQVGE 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + +AL + D++NV + G TG AV++L +GQNSI++ GG N + +
Sbjct: 65 DSAGEFMINALKKDRINTDHINVTSNAG--TGSAVILLDKEGQNSIMVYGGANQAMSTDI 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + V+ A +++ Q E P +V + K A+ GV I + A I LL D
Sbjct: 123 IADSE-AVIADADVLISQFETPQTVAYEAFKVAKKHGVMTILNPAPA-ADILDGLLEVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + + + K MG+Q +++ +G +G+ P
Sbjct: 181 LIVPNETESATLTGINVTDIDSMDQNAAKFASMGIQNLIITVGDRGAYY----HTPDASG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+PA +V DTT AGDTF +F+ ++ S E L +A A+S+ VQ GA+PS+P
Sbjct: 237 FVPAFKVKAKDTTAAGDTFIGAFSSKVLKDLSNIEMALTYAQQASSITVQRMGALPSIPT 296
Query: 367 RKSV 370
+ +
Sbjct: 297 TEEI 300
>gi|227512187|ref|ZP_03942236.1| ribokinase [Lactobacillus buchneri ATCC 11577]
gi|227084581|gb|EEI19893.1| ribokinase [Lactobacillus buchneri ATCC 11577]
Length = 305
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D + I ++PK GET++A++ AGGKGANQA A+ T F+GQVGE
Sbjct: 5 VVVLGSLNVDTTLHIAQMPKPGETISAQSKTNSAGGKGANQAVAAARSHAQTSFIGQVGE 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + +AL + D++NV G TG AV++L +GQNSI++ GG N + +
Sbjct: 65 DSAGEFMINALKKDQINTDHINVTSSAG--TGSAVILLDKEGQNSIMVYGGANQAMSTDI 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + V+ A +++ Q E P +V + K A+ GV I + A I LL D
Sbjct: 123 IADSET-VIADADVLISQFETPQTVAYEAFKVAKKHGVMTILNPAPA-ADILDGLLEVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + + + K MG+Q +++ +G +G+ P
Sbjct: 181 LIVPNETESATLTGINVTDIDSMDQNAAKFASMGIQNLIITVGDRGAYY----HTPDASG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+PA +V DTT AGDTF +F+ ++ S E L +A A+S+ VQ GA+PS+P
Sbjct: 237 FVPAFKVNAKDTTAAGDTFIGAFSSKVLKDLSNIEMALTYAQQASSITVQRMGALPSIPT 296
Query: 367 RKSV 370
+ +
Sbjct: 297 SEEI 300
>gi|268319136|ref|YP_003292792.1| ribokinase [Lactobacillus johnsonii FI9785]
gi|262397511|emb|CAX66525.1| ribokinase [Lactobacillus johnsonii FI9785]
Length = 308
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 169/309 (54%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 4 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + G+ +D++ + + TG A ++LQ GQNSIII G N E
Sbjct: 64 DDNGRFMLEQFKENGINVDHVAITPNQ--QTGQAYILLQETGQNSIIIQHGANFDVTAED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR AG I + IP+ELL D
Sbjct: 122 VRNAKSQ-IEDSDFVIAQFETPIEATIEAFKIAREAGKITILNPAPARTDIPEELLELTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ H+MG++ V++ +G +GS + E +
Sbjct: 181 LITPNETEAESITGIKVDSEESMKKSSEIFHQMGIKGVIITIGERGSYVSYED----IEE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE-ECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S + + +A+ ++S VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFLGALSSELKPDLSNLIDSVIYASKSSSFTVQKLGAFPSIPT 296
Query: 367 RKSVLNLLQ 375
R+ V L+
Sbjct: 297 REVVEEALK 305
>gi|395799284|ref|ZP_10478565.1| ribokinase [Pseudomonas sp. Ag1]
gi|395336388|gb|EJF68248.1| ribokinase [Pseudomonas sp. Ag1]
Length = 305
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 160/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRAGETLIGQSFSTVPGGKGANQAVASARLGAEVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL G+ ++ V DG +G A++++ QN+I+IV G+N
Sbjct: 62 VGTDAYGAQLRDALLVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P K D V++ A +++ Q E P K R G VI + P+P++
Sbjct: 119 PAKLQAFD-SVLQAADVIVCQLETPMETVGHALKRGRELGKTVILNPAPASGPLPEDWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A + K G +V++ LG++G ALF +G+
Sbjct: 178 AIDYLIPNESEASALSGVVVDSLDSAKAAATRLIKAGAGKVIITLGSEG-ALFADGQG-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA G+S E +RF AA+L V GA PS+P
Sbjct: 236 EHLVAPKVKAVDTTAAGDTFVGGFAAALANGRSEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|421144107|ref|ZP_15604028.1| ribokinase [Pseudomonas fluorescens BBc6R8]
gi|404504699|gb|EKA18748.1| ribokinase [Pseudomonas fluorescens BBc6R8]
Length = 305
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRAGETLIGQSFSTVPGGKGANQAVASARLGAEVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL G+ ++ V+ +G A++++ QN+I+IV G+N
Sbjct: 62 VGNDAYGAQLRDALLVEGIDCQAVSTVEG---SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P K D V++ A +++ Q E P K R G VI + P+P++
Sbjct: 119 PAKLQAFD-SVLQAADVIVCQLETPMETVGHALKRGRELGKTVILNPAPASGPLPEDWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A + K G +V++ LG++G ALF +G+
Sbjct: 178 AIDYLIPNESEASALSGVVVDSLDSAKAAATRLIKAGAGKVIITLGSEG-ALFADGQG-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA G+S E +RF AA+L V GA PS+P
Sbjct: 236 EHLVAPKVKAVDTTAAGDTFVGGFAAALANGRSEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|433544679|ref|ZP_20501056.1| ribokinase [Brevibacillus agri BAB-2500]
gi|432184027|gb|ELK41551.1| ribokinase [Brevibacillus agri BAB-2500]
Length = 300
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 170/303 (56%), Gaps = 12/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ + LPK GET+++ + + GGKGANQA A+L +G VGE
Sbjct: 3 IAVVGSINMDLVSHVHHLPKAGETISSHDFRLIPGGKGANQAVAAARLGAHVSMIGMVGE 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG + ++L+ V ++ +K G TG A + + DG+N+I++V G N E
Sbjct: 63 DENGSKMLNSLTEARVHVEG---IKRSGT-TGMAFINVSDDGENNIVLVPGANAQMSVEH 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++L ++ ++ +VLLQ EIP V V K A G VI + A P ELL ++
Sbjct: 119 I-EQNLSILVESDVVLLQLEIPLPVVEYVVKKASGLGKLVILNPAPAQALSP-ELLQYVH 176
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE+EL L+GMPT + ++ A K G ++V+V LG KG+ L P +
Sbjct: 177 TLTPNETELASLSGMPTATLSEVEAAAKKLLASGPKRVIVTLGEKGALLVT----PDGAT 232
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+PA RV +DTT AGD+FTA+FAVG +G E FA+ A++ V +GA PS+P
Sbjct: 233 HVPACRVEPVDTTAAGDSFTAAFAVGIAKGMPEAEAAAFASRVAAIVVTRRGAQPSLPTL 292
Query: 368 KSV 370
V
Sbjct: 293 AEV 295
>gi|428213546|ref|YP_007086690.1| ribokinase [Oscillatoria acuminata PCC 6304]
gi|428001927|gb|AFY82770.1| ribokinase [Oscillatoria acuminata PCC 6304]
Length = 308
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 173/311 (55%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ RLPK GET+A + T +GGKGANQA AKL T+ +G+VG
Sbjct: 3 IVVFGSINLDLVTRTHRLPKPGETLAGISFFTASGGKGANQAVAAAKLGMTTWMIGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + ++L GV+ D ++ D +G A + ++ G+N+I+IV G N E
Sbjct: 63 DSFGQELLESLQQSGVKCD--RILIDENTTSGIATIAVEDTGENTIVIVPGANDRV-NES 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D +++ A +LLQ EIP S + AK A+ AGVPVI D AP +P EL +
Sbjct: 120 DCDRLTDLLPDAAALLLQLEIPLSAVLAAAKKAQDAGVPVILDP----APARELPPELYS 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+EL LTG+ E EA+ + K GV+ + KLG KG L GE
Sbjct: 176 LIDIITPNETELSLLTGLAVRDVETAREAITELQKRGVKTAIAKLGGKG-VLCARGE--- 231
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+Q +PA V +DT AGD F + AV +G S E +R+ AAA +L V GA ++
Sbjct: 232 EQFFVPAFEVEAVDTVAAGDAFNGALAVAIAQGLSLPEAVRWGAAAGALAVTKPGAQSAL 291
Query: 365 PDRKSVLNLLQ 375
P R + L+
Sbjct: 292 PSRLTFEEFLR 302
>gi|447917402|ref|YP_007397970.1| ribokinase [Pseudomonas poae RE*1-1-14]
gi|445201265|gb|AGE26474.1| ribokinase [Pseudomonas poae RE*1-1-14]
Length = 305
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRASRLPRAGETLIGQSFSTVPGGKGANQAVASARLGAEVAMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + +AL G+ ++ V DG +G A++++ QN+I+IV G+N
Sbjct: 62 VGTDAYGDQLREALLVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ +++ Q E+P K R G VI + P+P E
Sbjct: 119 PAAMRAVD-AVLQAGDVIVCQLEVPMETVGYTLKRGRELGKTVILNPAPASGPLPTEWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+GM DS + A + K G +V++ LGA+G ALF +GE
Sbjct: 178 SIDYLIPNESEASALSGMTVDSLDSAKLAATQLIKAGAGKVIITLGAEG-ALFADGES-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA V G+S + +RF AA+L V GA PS+P
Sbjct: 236 EHLMAPKVKAVDTTAAGDTFVGGFAAALVNGQSEAQAIRFGQVAAALSVTRDGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LNDV 299
>gi|408480933|ref|ZP_11187152.1| ribokinase [Pseudomonas sp. R81]
Length = 305
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 160/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ RLP+ GET+ +T T+ GGKGANQA A+L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRASRLPRAGETLIGQTFSTVPGGKGANQAVASARLGADVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + +AL G+ ++ V DG +G A++++ QN+I+IV G+N
Sbjct: 62 VGSDAYGSQLREALLVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q E+P + K R G VI + P+P E
Sbjct: 119 PASLQAFD-AVLQAADVIVCQLEVPMNTVGYALKRGRELGKTVILNPAPASGPLPAEWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A + + G +V+V LGA+G ALF +G++
Sbjct: 178 SIDYLIPNESEASALSGVTVDSIDAAKVAATQLIQAGAGKVIVTLGAQG-ALFTDGQR-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 236 EHLQAPKVKAVDTTAAGDTFVGGFAAALANGKSEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|354603938|ref|ZP_09021931.1| ribokinase [Alistipes indistinctus YIT 12060]
gi|353348370|gb|EHB92642.1| ribokinase [Alistipes indistinctus YIT 12060]
Length = 309
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 168/299 (56%), Gaps = 8/299 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V+ +LP+ GETV GGKGANQA A+L + +VG+
Sbjct: 8 IVVVGSINTDMTVKSGKLPRPGETVLGGVFFKNQGGKGANQAVAAARLGASVRMIAKVGK 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ +L+ GV D ++ D P+G A++++ G+N I + G N++ PE+
Sbjct: 68 DAFGEESVASLAREGV--DTAGILTDAEHPSGIAMILVDDRGENMISVASGANLALTPEE 125
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
G + E+++ AGIVL+Q EIP V VA+ A+ G VI + A +P ELL +
Sbjct: 126 LGAVE-EIIRSAGIVLMQLEIPMPVIEYVARMAKQHGATVILNPAPAPKQQLPPELLAHV 184
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DIL PN++E ++G + YE + A K +MGV+ V++ +GA G +FV +
Sbjct: 185 DILIPNQTEAELISGTAVNDYESAAAAAGKIGQMGVRTVIITMGAHG--VFVYDSESGNS 242
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
II A RV DTT AGD F + +V EG+ E L FA AA++ V +GA PS+P
Sbjct: 243 EIIVAKRVKATDTTAAGDCFCGALSVALNEGRPLNEALDFANRAAAISVTRRGAQPSLP 301
>gi|385825543|ref|YP_005861885.1| ribokinase [Lactobacillus johnsonii DPC 6026]
gi|417837178|ref|ZP_12483417.1| ribokinase [Lactobacillus johnsonii pf01]
gi|329666987|gb|AEB92935.1| ribokinase [Lactobacillus johnsonii DPC 6026]
gi|338762373|gb|EGP13641.1| ribokinase [Lactobacillus johnsonii pf01]
Length = 308
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 168/309 (54%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I +LP+ GET+A AGGKGANQA ++ + T FVG+VG+
Sbjct: 4 VTIVGSINVDNIMHIKKLPQPGETIAMSEFSKAAGGKGANQAVASSRAKNETIFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + + G+ +D++ + + TG A ++LQ GQNSIII G N
Sbjct: 64 DDNGRFMLEQFKENGINVDHVAITPNQ--QTGQAYILLQETGQNSIIIQHGANFDVTAAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ + V+ Q E P I+ K AR AG I + IP+ELL D
Sbjct: 122 VRNAKSQ-IEDSDFVIAQFETPIEATIEAFKIAREAGKITILNPAPARTDIPEELLELTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ DS E + ++ H+MG++ V++ +G +GS + E +
Sbjct: 181 LITPNETEAESITGIKVDSEESMKKSSEIFHQMGIKGVIITIGERGSYVSYED----IEE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S + + +A+ ++S VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFLGALSSELKPDLSNLRDSVIYASKSSSFTVQKLGAFPSIPT 296
Query: 367 RKSVLNLLQ 375
R+ V L+
Sbjct: 297 REVVEEALK 305
>gi|395499426|ref|ZP_10431005.1| ribokinase [Pseudomonas sp. PAMC 25886]
Length = 305
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRAGETLIGQSFSTVPGGKGANQAVASARLGAEVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL G+ ++ V DG +G A++++ QN+I+IV G N
Sbjct: 62 VGTDAYGVQLRDALVVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGGNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P K D V++ A +++ Q E P K R G VI + P+P++
Sbjct: 119 PAKLQTFD-SVLQAADVIVCQLETPMDTVGHALKRGRELGKTVILNPAPASGPLPEDWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A + K G +V++ LG++G ALF +G+
Sbjct: 178 AIDYLIPNESEASALSGVVVDSLDSAKVAATRLIKAGAGKVIITLGSEG-ALFADGQG-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 236 EHLVAPKVKAVDTTAAGDTFVGGFAAALANGKSEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|398987655|ref|ZP_10692090.1| ribokinase [Pseudomonas sp. GM24]
gi|399013596|ref|ZP_10715900.1| ribokinase [Pseudomonas sp. GM16]
gi|398113371|gb|EJM03219.1| ribokinase [Pseudomonas sp. GM16]
gi|398150459|gb|EJM39050.1| ribokinase [Pseudomonas sp. GM24]
Length = 305
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 161/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP GET+ + T++GGKGANQA A+L VG
Sbjct: 2 PANVVVIGSLNMDLVTRAPRLPVGGETLIGHSFATVSGGKGANQAVAAARLGAQVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG D G + +AL + ++ V D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDDYGVQLRNALLAEQIDCQAVSTVDDS---SGVALIVVDDNSQNAIVIVAGANGAMT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q EIPD+ K AR+ G VI + P+P +
Sbjct: 119 PAVIDRFD-AVLQAADVIICQLEIPDATVGHALKRARALGKVVILNPAPASRPLPADWFA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS E A + MG +V++ LGA+GS LF +G++
Sbjct: 178 AIDYLIPNESEATVLSGLSVDSLESAESAASQLIAMGAGKVIITLGAQGS-LFADGQR-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA G+S E +R+ AA+L V GA PS+P
Sbjct: 236 EHFPAPKVKAVDTTAAGDTFVGGFAAALANGRSEAEAIRYGQIAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
+ V
Sbjct: 296 QSDV 299
>gi|295426468|ref|ZP_06819118.1| ribokinase [Lactobacillus amylolyticus DSM 11664]
gi|295063836|gb|EFG54794.1| ribokinase [Lactobacillus amylolyticus DSM 11664]
Length = 306
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 163/314 (51%), Gaps = 20/314 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS+N D + + PK GET+ A AGGKGANQA AK T F+ +VGE
Sbjct: 4 IVVVGSSNVDTTLHVKDFPKPGETINASEVTMAAGGKGANQAVAAAKSGAETQFISRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + L GV L+Y+ G TGHA + L +GQN III G N S
Sbjct: 64 DSTGEFMLKQLKNYGVSLEYIQTT--AGQNTGHAYITLNDNGQNDIIIDHGANYSLSVLD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + V+ Q E P I+ K A+ G I + IPQELL D
Sbjct: 122 I-DAASNLLGEVDCVIAQFETPLEATIEAFKLAKRQGAVTILNPAPAIKNIPQELLQLTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ + + + K H+MGV V++ G KG+ + + +
Sbjct: 181 VITPNETESAAITGIEINEENDLKLSAAKLHEMGVSNVVITYGDKGAYI----STAVSEK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGK------SREECLRFAAAAASLCVQVKGAI 361
++PA +V +DTT AGDTF +GF+ G + E+ A+ A+S+ VQ GA
Sbjct: 237 LVPAFKVSAVDTTAAGDTF-----LGFLAGNLNKDLTNIEQAAVIASRASSIAVQRLGAQ 291
Query: 362 PSMPDRKSVLNLLQ 375
PS+P K V +L++
Sbjct: 292 PSIPTAKEVKDLME 305
>gi|422693779|ref|ZP_16751786.1| ribokinase [Enterococcus faecalis TX4244]
gi|315148813|gb|EFT92829.1| ribokinase [Enterococcus faecalis TX4244]
Length = 305
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 168/306 (54%), Gaps = 10/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ E + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEESMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIPY 298
Query: 367 RKSVLN 372
+ +++
Sbjct: 299 QHELVD 304
>gi|429333138|ref|ZP_19213843.1| ribokinase [Pseudomonas putida CSV86]
gi|428762144|gb|EKX84353.1| ribokinase [Pseudomonas putida CSV86]
Length = 302
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 164/297 (55%), Gaps = 7/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ RLP+ GET+A ++ T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVIGSLNMDLVTRAQRLPRAGETLAGESFTTVPGGKGANQAVAAARLGAEVAMIGCVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + + L G+ + VV G+ +G A++++ + QN+I+IV G+N C +
Sbjct: 65 DAYGQSLREGLIAEGIDCRALEVVA--GMSSGVALIVVDAASQNTIVIVAGSN-GCLSSR 121
Query: 190 FGDEDLEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ +++ A +V+ Q E+ PD+V +A+ AR G VI + ++ P+P E L +
Sbjct: 122 LIERFDAMLQGADVVVCQMEVPPDTVAFALAR-ARQLGKTVILNPAPVNGPLPVEWLASV 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNESE LTG+P D EA +G +V+V LGA+G+ + + +
Sbjct: 181 DYLIPNESEAAALTGLPVDDLSSAQEAGRHLRGLGAARVIVTLGAQGAVMV--SARGSEH 238
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF +FA G + E + F AA++ V GA PS+P
Sbjct: 239 FAAPVVQAVDTTAAGDTFVGAFAAALARGCTEHESILFGQRAAAISVTRAGAQPSIP 295
>gi|377809491|ref|YP_005004712.1| ribokinase [Pediococcus claussenii ATCC BAA-344]
gi|361056232|gb|AEV95036.1| ribokinase [Pediococcus claussenii ATCC BAA-344]
Length = 303
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 164/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D ++ P GET+A + GGKGANQA ++ T F+G+VG+
Sbjct: 5 IVVIGSLNVDTILQASHFPSAGETLALHDEKIAGGGKGANQAISASRSGAKTSFIGKVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NGK + + LS G+ L Y+++ KD TG A V+L+ G+N I+I G N E
Sbjct: 65 DSNGKYMLEQLSRSGIDLSYISISKD--TKTGQAFVILEDSGENRILIYAGAN-GTLNES 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++A V+ Q E P + I+ K AR GV I + +P ELL D
Sbjct: 122 DAKMARDKIREADFVIAQLETPIAATIEAFKIARDFGVKTILNPAPAIKELPNELLELTD 181
Query: 250 ILSPNESELGRLTGMPT--DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
I++PNE+E LTG+ E+++ A++ H +G++ VL+ LG++G ++ +K
Sbjct: 182 IITPNETEAEILTGIKIIDKRSEELASAIL--HNIGIETVLITLGSEG--VYYSSKKGSG 237
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEG-KSREECLRFAAAAASLCVQVKGAIPSMPD 366
+DTT AGDTF + A K+ EE +++ A+S+ VQ GA PS+P
Sbjct: 238 NVAAIKVNAVDTTAAGDTFLGALAAELKPNLKNLEEAIKYGNKASSIAVQKIGAQPSIPS 297
Query: 367 RKSV 370
RK +
Sbjct: 298 RKEI 301
>gi|440739123|ref|ZP_20918644.1| ribokinase [Pseudomonas fluorescens BRIP34879]
gi|440380113|gb|ELQ16684.1| ribokinase [Pseudomonas fluorescens BRIP34879]
Length = 305
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRASRLPRAGETLIGQSFSTVPGGKGANQAVASARLGAEVAMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + +AL G+ ++ V DG +G A++++ QN+I+IV G+N
Sbjct: 62 VGTDAYGDQLREALLVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ +++ Q E+P K R G VI + P+P E
Sbjct: 119 PAAMRAVD-AVLQAGDVIVCQLEVPMETVGYTLKRGRELGKTVILNPAPASGPLPTEWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A + K G +V++ LGA+G ALF +GE
Sbjct: 178 SIDYLIPNESEASALSGVTVDSLDSAKLAATQLIKAGAGKVIITLGAEG-ALFADGES-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA V G+S + +RF AA+L V GA PS+P
Sbjct: 236 EHLMAPKVKAVDTTAAGDTFVGGFAAALVNGQSEAQAIRFGQVAAALSVTRDGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LNDV 299
>gi|399002840|ref|ZP_10705518.1| ribokinase [Pseudomonas sp. GM18]
gi|398123976|gb|EJM13503.1| ribokinase [Pseudomonas sp. GM18]
Length = 305
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 160/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGQSFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ V+D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGEALRGALLAEQIDCQAVSTVEDS---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
PE D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 PEVIDRFD-SVLQTADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + MG +V++ LGA+GS LF G +
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLSTAEAAATRLIAMGAGKVIITLGAQGS-LFANGTR-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P +DTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPTVTAVDTTAAGDTFVGGFAAALAAGKSEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|307281851|ref|ZP_07562067.1| ribokinase [Enterococcus faecalis TX0860]
gi|312899323|ref|ZP_07758657.1| ribokinase [Enterococcus faecalis TX0470]
gi|306503882|gb|EFM73103.1| ribokinase [Enterococcus faecalis TX0860]
gi|311293525|gb|EFQ72081.1| ribokinase [Enterococcus faecalis TX0470]
Length = 305
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 164/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ E + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEESMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 297
>gi|255974405|ref|ZP_05424991.1| ribokinase [Enterococcus faecalis T2]
gi|255967277|gb|EET97899.1| ribokinase [Enterococcus faecalis T2]
Length = 303
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 164/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 4 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 64 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 122 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ E + +A H++G++ V++ +G+KG+ V G +
Sbjct: 181 MIVPNETETEILTGIKITDEESMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 295
>gi|312868743|ref|ZP_07728935.1| ribokinase [Lactobacillus oris PB013-T2-3]
gi|311095729|gb|EFQ53981.1| ribokinase [Lactobacillus oris PB013-T2-3]
Length = 307
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 168/304 (55%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D ++R P+ GET+AA++ + GGKGANQA A+ T FVG VG
Sbjct: 5 VVVLGSINVDTTYHVNRFPQPGETIAAQSKSSAPGGKGANQAVAAARSGAQTAFVGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +AL + ++N+ K G TG A + L ++GQN I++ GG N + P +
Sbjct: 65 DNEGQYMLEALKENDIDTSHINIDKYHG--TGSAAITLDANGQNDIMVYGGANQAMQPGE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
FGD E++ ++ Q E P +V + + K A+ GV + + +P ELL + D
Sbjct: 123 FGDLS-ELLTHTDFLIAQFETPQAVALDLFKQAKEQGVTTVLNPAPAHEIMP-ELLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + + ++ + GV+ +L+ LG +G V P
Sbjct: 181 VIAPNETECALLTGIELTDEDSMLKSADYFRERGVKHLLITLGDRG----VFYSTPDDHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + E+ LR+A A+SL VQ GA+PS+P
Sbjct: 237 LVPAFKVKAVDTTAAGDTFIGALCSQLEKDLANVEDSLRYAQRASSLTVQRMGAMPSIPT 296
Query: 367 RKSV 370
+ V
Sbjct: 297 GEDV 300
>gi|256844619|ref|ZP_05550104.1| ribokinase [Lactobacillus crispatus 125-2-CHN]
gi|262047089|ref|ZP_06020048.1| ribokinase [Lactobacillus crispatus MV-3A-US]
gi|423318032|ref|ZP_17295929.1| ribokinase [Lactobacillus crispatus FB049-03]
gi|423321375|ref|ZP_17299247.1| ribokinase [Lactobacillus crispatus FB077-07]
gi|256613160|gb|EEU18364.1| ribokinase [Lactobacillus crispatus 125-2-CHN]
gi|260572666|gb|EEX29227.1| ribokinase [Lactobacillus crispatus MV-3A-US]
gi|405596203|gb|EKB69549.1| ribokinase [Lactobacillus crispatus FB077-07]
gi|405597411|gb|EKB70684.1| ribokinase [Lactobacillus crispatus FB049-03]
Length = 308
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 159/312 (50%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINALDITTAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 64 DSEGNFITHQLKSYGVDTTYVQTTM--GAKTGHAYITLNEAGQNDIIIDHGANYELTVED 121
Query: 190 F---GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
GD ++K V+ Q EIP V ++ K A+ A I + IP+ELL
Sbjct: 122 IRAAGD----LIKSWDCVIAQFEIPLDVTLEAFKIAKKAKKITILNPAPAVDEIPKELLQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ DI++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + P
Sbjct: 178 YTDIITPNETESAKITGIAIKDNSTLATNAEKLHMLGVKNVVITYGDKGAYI----STPD 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ +IP +V DTTGAGDTF G S EE + A+ A+S+ VQ GA PS
Sbjct: 234 VEELIPTYKVEAADTTGAGDTFIGYLVSNLNSGLSNFEEAAKIASRASSIAVQRLGAQPS 293
Query: 364 MPDRKSVLNLLQ 375
+P + V ++
Sbjct: 294 IPTEQEVKQAME 305
>gi|387894625|ref|YP_006324922.1| ribokinase [Pseudomonas fluorescens A506]
gi|387160065|gb|AFJ55264.1| ribokinase [Pseudomonas fluorescens A506]
Length = 305
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 158/304 (51%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ +T T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRAGETLIGQTFSTVPGGKGANQAVASARLGASVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G DA G + DAL G+ ++ V DG +G A++++ QN+I+IV G+N
Sbjct: 62 IGTDAYGSQLRDALLVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q E+P + R G VI + P+P +
Sbjct: 119 PASLRTCD-AVLQAADVIICQLEVPMETVGYALQRGRELGKTVILNPAPASGPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A + G +V++ LGA+G ALF +G+
Sbjct: 178 SIDYLIPNESEASALSGVTVDSLDSAKVAATALIQAGAGKVIITLGAQG-ALFADGQS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA V G+S +RF AA+L V GA PS+P
Sbjct: 236 EHLVAPKVKAVDTTAAGDTFVGGFAAALVAGQSEARAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|407362618|ref|ZP_11109150.1| ribokinase [Pseudomonas mandelii JR-1]
Length = 305
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGQSFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ V+ +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGEELRGALMVEQIDCQAVSTVEGS---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P+ D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 PQVIDRFD-AVLQAADVIICQLEVPDATVGHALKRGRELGKIVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + +G +V++ LGA+GS +F G
Sbjct: 178 SIDYLIPNESEASALSGLPVDSLASAETAATRLIALGAGKVIITLGAQGS-MFANGTG-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GK+ E +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPTVKAVDTTAAGDTFVGGFAAALASGKTEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSEV 299
>gi|373454806|ref|ZP_09546669.1| ribokinase [Dialister succinatiphilus YIT 11850]
gi|371935502|gb|EHO63248.1| ribokinase [Dialister succinatiphilus YIT 11850]
Length = 296
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 174/309 (56%), Gaps = 26/309 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ VE DR P GETV K GGKGANQA A+L Y VG VG DA
Sbjct: 6 VIGSCNMDLTVEADRRPLAGETVMGKRLIVSPGGKGANQAVAAARLGEEVYMVGCVGRDA 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
G L+ DAL GV+ DY++V+ GV TG A ++L ++G NSII++ G N P+
Sbjct: 66 YGSLMLDALKKSGVKTDYVSVLD--GVDTGTAHIIL-AEGDNSIIVLKGANDRVSPQVV- 121
Query: 192 DEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFID 249
DE ++++ + +V+LQ EIP D++ + + VPV+ + A MD IP+E ++ +
Sbjct: 122 DEAFDIIRTSDLVMLQHEIPMDTIGYIIDRCYEEK-VPVMLNPAPYMD--IPKEWIDKVT 178
Query: 250 ILSPNESELGRL-TGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE E + GM D ++K H +V++ +G++G L+ EG + +
Sbjct: 179 YITPNEHEAALMFQGMDRDE-------ILKSH---AGKVIMTVGSEG-VLYGEGNEVVH- 226
Query: 309 SIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+P V+DTTGAGDTF +FA G EG S E +RFA AAA+L V GA MP
Sbjct: 227 --VPGFHVPVVDTTGAGDTFNGAFAAGRAEGLSIRESIRFANAAAALSVGKIGAQGGMPW 284
Query: 367 RKSVLNLLQ 375
R V +L
Sbjct: 285 RNEVEEMLS 293
>gi|398996761|ref|ZP_10699611.1| ribokinase [Pseudomonas sp. GM21]
gi|398126065|gb|EJM15513.1| ribokinase [Pseudomonas sp. GM21]
Length = 305
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L +G
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGESFATVSGGKGANQAVAAARLGADVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + AL + ++ V D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGAQLRGALLAEQIDCQAVSTVDDS---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P+ D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 PQVIDRFD-AVLQTADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWFA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+P DS E A + MG +V++ LGA GS LF +G + +
Sbjct: 178 AIDYLIPNESEASVLTGLPVDSLESAETAATRLIAMGASKVIITLGAGGS-LFADGTR-L 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P +DTT AGDTF FA G S E +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPKVNAVDTTAAGDTFVGGFAAALAAGSSEAEAIRFGQVAAALSVTQAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|403515507|ref|YP_006656327.1| Ribokinase [Lactobacillus helveticus R0052]
gi|403080945|gb|AFR22523.1| Ribokinase [Lactobacillus helveticus R0052]
Length = 308
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 158/309 (51%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + I PK GET+ A + GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHIKDFPKPGETINATEITSAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 64 DSEGGYITHQLKNYGVDTTYVQTTM--GSKTGHAYITLNEAGQNDIIIDHGANYELTVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ K V+ Q E P V I+ K A+ AG I + IP+ELL + D
Sbjct: 122 IQAAS-DLFKDVDCVIAQFETPLEVTIEAFKLAKKAGKITILNPAPAIDKIPEELLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + ++
Sbjct: 181 IITPNETESAKITGIQIKDNSTLATNAEKLHLLGVKNVVITYGDKGAYI----SSADIET 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECL-RFAAAAASLCVQVKGAIPSMPD 366
++PA +V DTTGAGDTF A S E + + A+ A+S+ VQ GA PS+P
Sbjct: 237 LVPAYKVKATDTTGAGDTFIGYLASNLKPDLSNFEAVAKIASRASSIAVQRLGAQPSIPT 296
Query: 367 RKSVLNLLQ 375
K V ++
Sbjct: 297 AKEVEEAME 305
>gi|366088031|ref|ZP_09454516.1| sugar kinase, ribokinase family protein [Lactobacillus zeae KCTC
3804]
Length = 323
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 169/312 (54%), Gaps = 13/312 (4%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLPK GET+ AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPKPGETMEMDAFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQS GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNKIDTQYVTTTSGEQTGQAYILLQSSGQNSIIIQHGANFDLT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P + +++ A V+ + E P + K A++AG+ I + +P LL
Sbjct: 120 PTDV-QQAAALIQTADFVVAELETPVDATAEAFKIAKAAGMVTILNPAPAQKDLPLTLLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + H++G++ V++ LG+KG+ + ++G+
Sbjct: 179 NVDLITPNETESELITGIPVTDEASMRASAAYYHELGIRGVIITLGSKGAFISLDGQA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ E +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQPDLKNIVEAATYASMASSFTVQKLGAFPS 294
Query: 364 MP---DRKSVLN 372
+P D K+ LN
Sbjct: 295 IPLGVDVKAALN 306
>gi|348665869|gb|EGZ05697.1| hypothetical protein PHYSODRAFT_353133 [Phytophthora sojae]
Length = 273
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 152/313 (48%), Gaps = 58/313 (18%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQT---LAGGKGANQAACGAKL---SHPTYF 123
++VVGS DI VE+DR+P GETV+A S T GGKG NQAA AKL HPT
Sbjct: 8 ILVVGSVGADIVVEVDRMPARGETVSASKSDTGNVYPGGKGDNQAATIAKLIGADHPTLT 67
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
AN
Sbjct: 68 AKMACHGAN--------------------------------------------------- 76
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
S W + + +K VL+Q EIP VN VAKAA VPV++D GG D PIP +
Sbjct: 77 SAWSNELPTGLTDAIKTTAFVLVQCEIPVRVNALVAKAAAETHVPVMWDTGGDDYPIPAD 136
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEG 302
+L + + PNE+EL RLT + + EA + G + VLV LGA GS V+G
Sbjct: 137 VLPLLTFVCPNETELARLTTREVNDIDDAIEAARFLQEQGAKDVLVTLGADGSVYVPVDG 196
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+ ++Q V+DTTGAGD + +FAV F EG+S ++C+ A+AA++LCVQ GA+P
Sbjct: 197 TEVVRQRTFKVDNVVDTTGAGDCYRGAFAVAFAEGRSIQDCMVRASAASALCVQRPGALP 256
Query: 363 SMPDRKSVLNLLQ 375
S+P V++ L+
Sbjct: 257 SLPSGDEVVDFLK 269
>gi|358064686|ref|ZP_09151248.1| ribokinase [Clostridium hathewayi WAL-18680]
gi|356697021|gb|EHI58618.1| ribokinase [Clostridium hathewayi WAL-18680]
Length = 310
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 159/303 (52%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+++ GS N DI + + R+P +GETV K + GGKGANQA KL +G +G
Sbjct: 5 ILIAGSLNMDIVINMTRMPVIGETVLGKELANVPGGKGANQACAAGKLGGDAVMLGCIGR 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G ++ +L+ GV + + G TG A + + +G NSI++V G N C E
Sbjct: 65 DSFGGVLQKSLADSGVDSSRL---RQTGSCTGTASIYVDGNGDNSIVVVPGANHDCGVEY 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D + ++ +LLQ EIP + R G VI + IP+E+L +D
Sbjct: 122 LKEMD-DAFQECSYILLQMEIPPEAVYYAVRRGRELGKTVILNPAPAPEEIPREILEKVD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE+EL +L+G+ + I + +MG + V+V +G +G L +G K
Sbjct: 181 YLTPNETELAKLSGLEGTDVKSIEAGARRLIEMGARHVIVTMGDQGCFLAGDG----KTK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ PA +V +DTT AGD F +F EG + EE +R A AA+S+ V KGA S+P R
Sbjct: 237 VFPARKVESVDTTAAGDCFNGAFVTALAEGMNVEESIRLANAASSIAVTRKGAQSSLPTR 296
Query: 368 KSV 370
+ V
Sbjct: 297 EEV 299
>gi|253574834|ref|ZP_04852174.1| ribokinase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845880|gb|EES73888.1| ribokinase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 446
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 176/315 (55%), Gaps = 26/315 (8%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + V+GS N DI VE ++P++GET+ + + GGKGANQA A+L T +G
Sbjct: 4 TQPKVAVIGSLNMDIVVEARQIPQIGETLLGDRVRFIPGGKGANQAVAAARLGASTSMIG 63
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG D G+ + AL GV D V + TG A + + +DG NSI++V G N
Sbjct: 64 AVGADNFGEDLLAALRKEGV--DVSGVKRLADTATGVASIYV-ADGDNSILVVPGANDQV 120
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
P D+ L+ +K+A IVLLQ EIP A+ A+S G VI + AP +PQ
Sbjct: 121 TPADI-DQHLDKLKEADIVLLQLEIPVETVFYAARIAKSLGKKVILNP----APARELPQ 175
Query: 243 ELLNFIDILSPNESELGRLTGM------PTDSYEQISE----AVVKCHKMGVQQVLVKLG 292
E+ +ID ++PN +EL R G+ TD+ S+ A+ + ++GV QV+ LG
Sbjct: 176 EIYEYIDYITPNRTELVRYAGIGASMTDATDTTHTNSDFIRMAMQRLKELGVAQVITTLG 235
Query: 293 AKGSALFVE-GE-KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAA 350
A+GSA E GE + + ++ V+DTTGAGD F A+ A+ V+G+S +E +++A+ A
Sbjct: 236 AEGSAFLDEVGEVRTVAGHVVS---VVDTTGAGDCFNAALAIALVQGQSLKEAIQYASQA 292
Query: 351 ASLCVQVKGAIPSMP 365
++L V GA MP
Sbjct: 293 SALAVTKFGAQAGMP 307
>gi|336054560|ref|YP_004562847.1| ribokinase [Lactobacillus kefiranofaciens ZW3]
gi|333957937|gb|AEG40745.1| Ribokinase [Lactobacillus kefiranofaciens ZW3]
Length = 308
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 160/309 (51%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINALDVTTAGGGKGANQAIAAAKSGAETYFISRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQNSI+I G N E
Sbjct: 64 DSAGGFITHQLKSYGVDATYVQTTM--GSKTGHAYITLSEAGQNSIVIDHGANYELTVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++++ V+ Q E P V + K A+ AG I + IP +LL + D
Sbjct: 122 VKAAS-DLIQNWDCVIAQFETPIEVTLAAFKMAKKAGKITILNPAPAIDKIPAKLLGYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E ++TG+P + ++ K H +G++ V++ G KG+ + P +
Sbjct: 181 IITPNETESAKITGIPIKNKSTLATNAEKLHLLGIKNVVITYGDKGAYV----STPDVEE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V DTTGAGDTF A + E + A+ A+S+ VQ GA PS+P
Sbjct: 237 LVPAYKVEAADTTGAGDTFIGYLASNLNSDLTNFTEAAKTASRASSIAVQRLGAQPSIPT 296
Query: 367 RKSVLNLLQ 375
K V + ++
Sbjct: 297 AKEVRDAME 305
>gi|295692457|ref|YP_003601067.1| ribokinase [Lactobacillus crispatus ST1]
gi|295030563|emb|CBL50042.1| Ribokinase [Lactobacillus crispatus ST1]
Length = 308
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 159/312 (50%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINALDITTAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 64 DSEGNFITHQLKSYGVDTTYVQTTM--GAKTGHAYITLNEAGQNDIIIDHGANYELTVED 121
Query: 190 F---GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
GD ++K V+ Q EIP V ++ K A+ A I + IP+ELL
Sbjct: 122 IRAAGD----LIKSWDCVIAQFEIPLDVTLEAFKIAKKAKKITILNPAPAVDEIPKELLQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ DI++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + P
Sbjct: 178 YTDIITPNETESAKITGIAIKDNSTLATNAEKLHMLGVKNVVITYGDKGAYI----STPD 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ +IPA +V DTTGAGDTF S EE + A+ A+S+ VQ GA PS
Sbjct: 234 VEELIPAYKVEAADTTGAGDTFIGYLVSNLNSDLSNFEEAAKIASRASSIAVQRLGAQPS 293
Query: 364 MPDRKSVLNLLQ 375
+P + V ++
Sbjct: 294 IPTEQEVKQAME 305
>gi|422868729|ref|ZP_16915266.1| ribokinase [Enterococcus faecalis TX1467]
gi|329573943|gb|EGG55522.1| ribokinase [Enterococcus faecalis TX1467]
Length = 305
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 10/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESTIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIPY 298
Query: 367 RKSVLN 372
+ +++
Sbjct: 299 QHELVD 304
>gi|307267899|ref|ZP_07549289.1| ribokinase [Enterococcus faecalis TX4248]
gi|307275075|ref|ZP_07556229.1| ribokinase [Enterococcus faecalis TX2134]
gi|307288327|ref|ZP_07568322.1| ribokinase [Enterococcus faecalis TX0109]
gi|422702523|ref|ZP_16760357.1| ribokinase [Enterococcus faecalis TX1302]
gi|422709469|ref|ZP_16766894.1| ribokinase [Enterococcus faecalis TX0027]
gi|306500713|gb|EFM70035.1| ribokinase [Enterococcus faecalis TX0109]
gi|306508193|gb|EFM77309.1| ribokinase [Enterococcus faecalis TX2134]
gi|306515774|gb|EFM84297.1| ribokinase [Enterococcus faecalis TX4248]
gi|315036054|gb|EFT47986.1| ribokinase [Enterococcus faecalis TX0027]
gi|315165986|gb|EFU10003.1| ribokinase [Enterococcus faecalis TX1302]
Length = 305
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 10/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIPY 298
Query: 367 RKSVLN 372
+ +++
Sbjct: 299 QHELVD 304
>gi|417886744|ref|ZP_12530888.1| ribokinase [Lactobacillus oris F0423]
gi|341593135|gb|EGS35992.1| ribokinase [Lactobacillus oris F0423]
Length = 307
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D ++R P+ GET+AA++ + GGKGANQA A+ T FVG VG
Sbjct: 5 VVVLGSINVDTTYHVNRFPQPGETIAAQSKSSAPGGKGANQAVAAARSGAQTAFVGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +AL + ++N+ K G TG A + L ++GQN I++ GG N + P +
Sbjct: 65 DNEGQYMLEALKENDIDTSHINIDKYHG--TGSAAITLDANGQNDIMVYGGANQAMQPGE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
FGD E++ ++ Q E P +V + + K A+ GV + + +P ELL + D
Sbjct: 123 FGDLS-ELLTHTDFLIAQFETPQAVALDLFKQAKEQGVTTVLNPAPAHEIMP-ELLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + ++ + GV+ +L+ LG +G V P
Sbjct: 181 VIAPNETECALLTGIELTDEGSMLKSADYFRERGVKHLLITLGDRG----VFYSTPDDHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + E+ LR+A A+SL VQ GA+PS+P
Sbjct: 237 LVPAFKVKAVDTTAAGDTFIGALCSQLEKDLANVEDSLRYAQRASSLTVQRMGAMPSIPT 296
Query: 367 RKSV 370
+ V
Sbjct: 297 GEDV 300
>gi|229547614|ref|ZP_04436339.1| ribokinase [Enterococcus faecalis TX1322]
gi|422684407|ref|ZP_16742647.1| ribokinase [Enterococcus faecalis TX4000]
gi|229307304|gb|EEN73291.1| ribokinase [Enterococcus faecalis TX1322]
gi|315030895|gb|EFT42827.1| ribokinase [Enterococcus faecalis TX4000]
Length = 305
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 162/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 IIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA + +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFTVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 297
>gi|256958243|ref|ZP_05562414.1| ribokinase [Enterococcus faecalis DS5]
gi|257078445|ref|ZP_05572806.1| ribokinase [Enterococcus faecalis JH1]
gi|294779230|ref|ZP_06744636.1| ribokinase [Enterococcus faecalis PC1.1]
gi|300860713|ref|ZP_07106800.1| ribokinase [Enterococcus faecalis TUSoD Ef11]
gi|397701114|ref|YP_006538902.1| ribokinase [Enterococcus faecalis D32]
gi|421513834|ref|ZP_15960583.1| Ribokinase [Enterococcus faecalis ATCC 29212]
gi|256948739|gb|EEU65371.1| ribokinase [Enterococcus faecalis DS5]
gi|256986475|gb|EEU73777.1| ribokinase [Enterococcus faecalis JH1]
gi|294453691|gb|EFG22087.1| ribokinase [Enterococcus faecalis PC1.1]
gi|300849752|gb|EFK77502.1| ribokinase [Enterococcus faecalis TUSoD Ef11]
gi|397337753|gb|AFO45425.1| ribokinase [Enterococcus faecalis D32]
gi|401673086|gb|EJS79495.1| Ribokinase [Enterococcus faecalis ATCC 29212]
Length = 303
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 167/306 (54%), Gaps = 10/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 4 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 64 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 122 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 181 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIPY 296
Query: 367 RKSVLN 372
+ +++
Sbjct: 297 QHELVD 302
>gi|424695600|ref|ZP_18131981.1| ribokinase [Enterococcus faecalis ERV41]
gi|402379600|gb|EJV13394.1| ribokinase [Enterococcus faecalis ERV41]
Length = 305
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYVNKASSLTVQRFGAQPSIP 297
>gi|365904950|ref|ZP_09442709.1| ribokinase [Lactobacillus versmoldensis KCTC 3814]
Length = 303
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 9/304 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D + I LP+ GET+ T GGKGANQA + T F+ ++G
Sbjct: 4 IVVLGSINVDTILNISHLPEPGETMHMHDRSTAGGGKGANQALAAVRAGAETSFISKIGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + G+ +D++ K G TG A ++LQ GQNSI++ GG N P
Sbjct: 64 DHAADFMMKTFKDDGLNIDHVTFSKTEG--TGKAYILLQDSGQNSILVYGGANADVTPAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE + +K A ++ Q E+P+ I+ K A+ V + IP ELLN +
Sbjct: 122 V-DEAKDSIKDADCIIAQFEVPNPAIIEAFKIAKDNDVVTFLNPAPAQKEIPTELLNLTE 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E +TG+P + +A K H+MGV VL+ +G KGS +E K
Sbjct: 181 IIAPNETEAEIITGVPVTDDASMDKAAKKMHEMGVPTVLITVGDKGSYYSMESG---KTG 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+ A +V +DTT AGDTF + ++ EE + +A ++SL VQ KGA S+P
Sbjct: 238 FVKAFKVKAVDTTAAGDTFVGALMAKLDHDRNNIEEAMTYANKSSSLTVQTKGAQNSIPY 297
Query: 367 RKSV 370
K+V
Sbjct: 298 AKNV 301
>gi|227518193|ref|ZP_03948242.1| ribokinase [Enterococcus faecalis TX0104]
gi|227554389|ref|ZP_03984436.1| ribokinase [Enterococcus faecalis HH22]
gi|229548178|ref|ZP_04436903.1| ribokinase [Enterococcus faecalis ATCC 29200]
gi|257420560|ref|ZP_05597550.1| ribokinase [Enterococcus faecalis X98]
gi|293382190|ref|ZP_06628133.1| ribokinase [Enterococcus faecalis R712]
gi|293388499|ref|ZP_06633003.1| ribokinase [Enterococcus faecalis S613]
gi|307272646|ref|ZP_07553894.1| ribokinase [Enterococcus faecalis TX0855]
gi|307290144|ref|ZP_07570063.1| ribokinase [Enterococcus faecalis TX0411]
gi|312902234|ref|ZP_07761443.1| ribokinase [Enterococcus faecalis TX0635]
gi|312909090|ref|ZP_07767950.1| ribokinase [Enterococcus faecalis DAPTO 516]
gi|312952230|ref|ZP_07771107.1| ribokinase [Enterococcus faecalis TX0102]
gi|422689066|ref|ZP_16747179.1| ribokinase [Enterococcus faecalis TX0630]
gi|422690762|ref|ZP_16748807.1| ribokinase [Enterococcus faecalis TX0031]
gi|422699717|ref|ZP_16757579.1| ribokinase [Enterococcus faecalis TX1342]
gi|422706188|ref|ZP_16763891.1| ribokinase [Enterococcus faecalis TX0043]
gi|422712301|ref|ZP_16769074.1| ribokinase [Enterococcus faecalis TX0309A]
gi|422715434|ref|ZP_16772154.1| ribokinase [Enterococcus faecalis TX0309B]
gi|422721758|ref|ZP_16778339.1| ribokinase [Enterococcus faecalis TX2137]
gi|422724925|ref|ZP_16781397.1| ribokinase [Enterococcus faecalis TX0312]
gi|422729805|ref|ZP_16786202.1| ribokinase [Enterococcus faecalis TX0012]
gi|422730714|ref|ZP_16787100.1| ribokinase [Enterococcus faecalis TX0645]
gi|422733850|ref|ZP_16790149.1| ribokinase [Enterococcus faecalis TX1341]
gi|422737089|ref|ZP_16793344.1| ribokinase [Enterococcus faecalis TX2141]
gi|424671944|ref|ZP_18108929.1| ribokinase [Enterococcus faecalis 599]
gi|424676109|ref|ZP_18112987.1| ribokinase [Enterococcus faecalis ERV103]
gi|424680711|ref|ZP_18117513.1| ribokinase [Enterococcus faecalis ERV116]
gi|424682871|ref|ZP_18119630.1| ribokinase [Enterococcus faecalis ERV129]
gi|424685826|ref|ZP_18122511.1| ribokinase [Enterococcus faecalis ERV25]
gi|424689127|ref|ZP_18125717.1| ribokinase [Enterococcus faecalis ERV31]
gi|424693395|ref|ZP_18129838.1| ribokinase [Enterococcus faecalis ERV37]
gi|424701302|ref|ZP_18137477.1| ribokinase [Enterococcus faecalis ERV62]
gi|424702395|ref|ZP_18138551.1| ribokinase [Enterococcus faecalis ERV63]
gi|424706974|ref|ZP_18142962.1| ribokinase [Enterococcus faecalis ERV65]
gi|424718724|ref|ZP_18147957.1| ribokinase [Enterococcus faecalis ERV68]
gi|424721793|ref|ZP_18150863.1| ribokinase [Enterococcus faecalis ERV72]
gi|424725181|ref|ZP_18154102.1| ribokinase [Enterococcus faecalis ERV73]
gi|424726977|ref|ZP_18155624.1| ribokinase [Enterococcus faecalis ERV81]
gi|424735350|ref|ZP_18163816.1| ribokinase [Enterococcus faecalis ERV85]
gi|424747638|ref|ZP_18175807.1| ribokinase [Enterococcus faecalis ERV93]
gi|424757019|ref|ZP_18184796.1| ribokinase [Enterococcus faecalis R508]
gi|227074349|gb|EEI12312.1| ribokinase [Enterococcus faecalis TX0104]
gi|227176477|gb|EEI57449.1| ribokinase [Enterococcus faecalis HH22]
gi|229306657|gb|EEN72653.1| ribokinase [Enterococcus faecalis ATCC 29200]
gi|257162384|gb|EEU92344.1| ribokinase [Enterococcus faecalis X98]
gi|291080473|gb|EFE17837.1| ribokinase [Enterococcus faecalis R712]
gi|291082103|gb|EFE19066.1| ribokinase [Enterococcus faecalis S613]
gi|306498772|gb|EFM68270.1| ribokinase [Enterococcus faecalis TX0411]
gi|306510641|gb|EFM79663.1| ribokinase [Enterococcus faecalis TX0855]
gi|310629817|gb|EFQ13100.1| ribokinase [Enterococcus faecalis TX0102]
gi|310634372|gb|EFQ17655.1| ribokinase [Enterococcus faecalis TX0635]
gi|311290652|gb|EFQ69208.1| ribokinase [Enterococcus faecalis DAPTO 516]
gi|315028124|gb|EFT40056.1| ribokinase [Enterococcus faecalis TX2137]
gi|315145967|gb|EFT89983.1| ribokinase [Enterococcus faecalis TX2141]
gi|315149715|gb|EFT93731.1| ribokinase [Enterococcus faecalis TX0012]
gi|315154552|gb|EFT98568.1| ribokinase [Enterococcus faecalis TX0031]
gi|315156423|gb|EFU00440.1| ribokinase [Enterococcus faecalis TX0043]
gi|315160087|gb|EFU04104.1| ribokinase [Enterococcus faecalis TX0312]
gi|315163227|gb|EFU07244.1| ribokinase [Enterococcus faecalis TX0645]
gi|315169245|gb|EFU13262.1| ribokinase [Enterococcus faecalis TX1341]
gi|315171837|gb|EFU15854.1| ribokinase [Enterococcus faecalis TX1342]
gi|315576358|gb|EFU88549.1| ribokinase [Enterococcus faecalis TX0309B]
gi|315577942|gb|EFU90133.1| ribokinase [Enterococcus faecalis TX0630]
gi|315582849|gb|EFU95040.1| ribokinase [Enterococcus faecalis TX0309A]
gi|402353551|gb|EJU88378.1| ribokinase [Enterococcus faecalis ERV116]
gi|402357754|gb|EJU92456.1| ribokinase [Enterococcus faecalis 599]
gi|402357783|gb|EJU92483.1| ribokinase [Enterococcus faecalis ERV103]
gi|402366305|gb|EJV00695.1| ribokinase [Enterococcus faecalis ERV129]
gi|402369187|gb|EJV03477.1| ribokinase [Enterococcus faecalis ERV25]
gi|402369280|gb|EJV03567.1| ribokinase [Enterococcus faecalis ERV31]
gi|402372099|gb|EJV06230.1| ribokinase [Enterococcus faecalis ERV62]
gi|402374478|gb|EJV08496.1| ribokinase [Enterococcus faecalis ERV37]
gi|402380683|gb|EJV14429.1| ribokinase [Enterococcus faecalis ERV68]
gi|402385947|gb|EJV19467.1| ribokinase [Enterococcus faecalis ERV65]
gi|402387604|gb|EJV21078.1| ribokinase [Enterococcus faecalis ERV63]
gi|402390320|gb|EJV23674.1| ribokinase [Enterococcus faecalis ERV72]
gi|402391766|gb|EJV25047.1| ribokinase [Enterococcus faecalis ERV73]
gi|402398157|gb|EJV31119.1| ribokinase [Enterococcus faecalis ERV81]
gi|402403908|gb|EJV36555.1| ribokinase [Enterococcus faecalis ERV85]
gi|402407684|gb|EJV40192.1| ribokinase [Enterococcus faecalis R508]
gi|402408594|gb|EJV41053.1| ribokinase [Enterococcus faecalis ERV93]
Length = 305
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 297
>gi|259503645|ref|ZP_05746547.1| ribokinase [Lactobacillus antri DSM 16041]
gi|259168364|gb|EEW52859.1| ribokinase [Lactobacillus antri DSM 16041]
Length = 307
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 167/304 (54%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D ++R P+ GET+AA++ + GGKGANQA A+ T FVG VG
Sbjct: 5 VVVLGSINVDTTYHVNRFPQPGETIAAQSKSSAPGGKGANQAVAAARSGAQTVFVGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +AL + ++N+ K G TG A + L ++GQN I++ GG N + P +
Sbjct: 65 DNEGQYMLEALKENDIDTSHINIDKYHG--TGSAAITLDANGQNDIMVYGGANQAMQPGE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
FGD E++ ++ Q E P +V + + K A+ GV + + +P ELL + D
Sbjct: 123 FGDLS-ELLAHTDFLIAQFETPQAVALDLFKQAKEQGVTTVLNPAPAHEIMP-ELLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + ++ + GV+ +L+ LG +G V P
Sbjct: 181 VIAPNETECALLTGIELTDEASMLKSADYFRERGVKHLLITLGDRG----VFYATPNGHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + E+ LR+A A+SL VQ GA+PS+P
Sbjct: 237 LVPAFKVKAVDTTAAGDTFIGALCSQLEKDLANVEDSLRYAQRASSLTVQRMGAMPSIPT 296
Query: 367 RKSV 370
+ V
Sbjct: 297 GEDV 300
>gi|308050422|ref|YP_003913988.1| ribokinase [Ferrimonas balearica DSM 9799]
gi|307632612|gb|ADN76914.1| ribokinase [Ferrimonas balearica DSM 9799]
Length = 307
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 166/310 (53%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D +++D P+ G+T+ A +AGGKGANQA A+L T +G VGE
Sbjct: 4 LTVLGSINVDHLLQVDHFPRPGQTLTANQYDIVAGGKGANQAVAAARLGATTTMIGCVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + G+ ++ V G TG A++ + S G+N+I I G N + PE+
Sbjct: 64 DAIGAQMVAQFGADGIDTAAIDTVP--GQNTGLAMIYVDSQGENNIGIWPGANAALSPER 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + A ++LLQ E P Q A+ AR++G V+ + AP +P LL
Sbjct: 122 VLAHH-DRITDADLLLLQLETPVESLEQAAELARASGTTVVLNP----APARDLPDSLLR 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCH-KMGVQQVLVKLGAKGSALFVEGE-K 304
+DI++PNE+E +LTG+ DS + A H + G++ V++ LG +G L GE +
Sbjct: 177 HVDIITPNETEAEQLTGIAIDSLDDADRAAQALHQRFGIKTVMITLGKRGVWLSEAGEGR 236
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I ++ A +DTT AGDTF +EG+S E +RF AAA+L V GA S+
Sbjct: 237 SIPGFVVDA---VDTTAAGDTFNGGMVTALLEGQSLAEAVRFGQAAAALSVTRMGAQSSI 293
Query: 365 PDRKSVLNLL 374
P R VL LL
Sbjct: 294 PTRDEVLGLL 303
>gi|398900419|ref|ZP_10649476.1| ribokinase [Pseudomonas sp. GM50]
gi|398181318|gb|EJM68888.1| ribokinase [Pseudomonas sp. GM50]
Length = 305
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 164/306 (53%), Gaps = 10/306 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGQSFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ V+D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGEALRGALLAEQIDCRAVSTVEDS---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
PE D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 PEVIDRFD-AVLQAADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + MG +V++ LG++GS LF +G
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLSSAETAAARLIAMGAGKVIITLGSQGS-LFADGT--- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ PAA+V +DTT AGDTF FA GKS + +RF AA+L V GA PS+
Sbjct: 234 RFEHFPAAKVKAVDTTAAGDTFVGGFAAALAAGKSEADAIRFGQVAAALSVTRAGAQPSI 293
Query: 365 PDRKSV 370
P V
Sbjct: 294 PTLSDV 299
>gi|256852468|ref|ZP_05557844.1| ribokinase [Enterococcus faecalis T8]
gi|256712322|gb|EEU27354.1| ribokinase [Enterococcus faecalis T8]
Length = 303
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 162/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 4 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 64 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 122 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 181 IIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 236
Query: 310 IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA + +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 237 IVPAFTVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 295
>gi|418007099|ref|ZP_12646993.1| ribokinase [Lactobacillus casei UW4]
gi|410549949|gb|EKQ24097.1| ribokinase [Lactobacillus casei UW4]
Length = 309
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 164/302 (54%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++++ A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRAADLIQSADFVVAEFETPVDATAEAFKIAKAAGKMTILNPAPAQKDLPASLLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + + H++G++ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELITGIPVVDEDSMRASAAYYHELGIRGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|312905715|ref|ZP_07764737.1| ribokinase [Enterococcus faecalis DAPTO 512]
gi|310628194|gb|EFQ11477.1| ribokinase [Enterococcus faecalis DAPTO 512]
Length = 305
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFFGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 297
>gi|168213601|ref|ZP_02639226.1| ribokinase [Clostridium perfringens CPE str. F4969]
gi|170714885|gb|EDT27067.1| ribokinase [Clostridium perfringens CPE str. F4969]
Length = 310
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 173/317 (54%), Gaps = 28/317 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVFMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ ++
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKDEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+ + I+ K A+ G I + AP I ELLN+
Sbjct: 124 SAE-NLIKESDIIISQFETPEDITIEAFKIAKENGKVTILNP----APAKKIKDELLNYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEGEK 304
DI+ PNE+E LTG+ E +A GV+ +++ LG KG+AL F E
Sbjct: 179 DIIVPNETEAELLTGIEIKDIEDAKKAGEIFLDKGVKFIIITLGEKGAALIGKDFCE--- 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSRE---ECLRFAAAAASLCVQVK 358
I+PA RV IDTT AGD+F + + RE +RF +S+ VQ K
Sbjct: 236 -----IVPAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGRETLSSSIRFGNKVSSIAVQRK 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P K VL + +
Sbjct: 291 GAQPSIPYLKEVLEVYK 307
>gi|418004040|ref|ZP_12644088.1| ribokinase [Lactobacillus casei UW1]
gi|410550997|gb|EKQ25077.1| ribokinase [Lactobacillus casei UW1]
Length = 309
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++K A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRSAGLIKSADFVVAEFETPVDATAEAFKIAKAAGKMTILNPAPAQKDLPAALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + + H++G++ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELITGIPVVDEDSMRASAAYYHELGIRGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|18310614|ref|NP_562548.1| ribokinase [Clostridium perfringens str. 13]
gi|18145295|dbj|BAB81338.1| ribokinase [Clostridium perfringens str. 13]
Length = 310
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 172/317 (54%), Gaps = 28/317 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVFMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ E+
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKEEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+++ I+ K A+ G I + AP I ELLN+
Sbjct: 124 SAE-NLIKESDIIISQFETPENITIEAFKIAKENGKVTILNP----APAKKIKDELLNYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEGEK 304
DI+ PNE+E LTG+ E +A GV+ ++ LG KG+AL F E
Sbjct: 179 DIIVPNETEAELLTGIEIKDIEDAKKAGDIFLGKGVKFAIITLGEKGAALIGKDFCE--- 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECL----RFAAAAASLCVQVK 358
I+PA RV IDTT AGD+F + +E L RF +S+ VQ K
Sbjct: 236 -----IVPAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGKETLISSIRFGNKVSSIAVQRK 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P K VL + +
Sbjct: 291 GAQPSIPYLKEVLEIYK 307
>gi|29377425|ref|NP_816579.1| ribokinase [Enterococcus faecalis V583]
gi|255970830|ref|ZP_05421416.1| ribokinase [Enterococcus faecalis T1]
gi|256960322|ref|ZP_05564493.1| ribokinase [Enterococcus faecalis Merz96]
gi|256962813|ref|ZP_05566984.1| ribokinase [Enterococcus faecalis HIP11704]
gi|257083358|ref|ZP_05577719.1| ribokinase [Enterococcus faecalis Fly1]
gi|257088082|ref|ZP_05582443.1| ribokinase [Enterococcus faecalis D6]
gi|257091212|ref|ZP_05585573.1| ribokinase [Enterococcus faecalis CH188]
gi|257417108|ref|ZP_05594102.1| ribokinase [Enterococcus faecalis ARO1/DG]
gi|257417822|ref|ZP_05594816.1| ribokinase [Enterococcus faecalis T11]
gi|384516773|ref|YP_005704078.1| ribokinase [Enterococcus faecalis 62]
gi|428768078|ref|YP_007154189.1| ribokinase [Enterococcus faecalis str. Symbioflor 1]
gi|29344892|gb|AAO82649.1| ribokinase [Enterococcus faecalis V583]
gi|255961848|gb|EET94324.1| ribokinase [Enterococcus faecalis T1]
gi|256950818|gb|EEU67450.1| ribokinase [Enterococcus faecalis Merz96]
gi|256953309|gb|EEU69941.1| ribokinase [Enterococcus faecalis HIP11704]
gi|256991388|gb|EEU78690.1| ribokinase [Enterococcus faecalis Fly1]
gi|256996112|gb|EEU83414.1| ribokinase [Enterococcus faecalis D6]
gi|257000024|gb|EEU86544.1| ribokinase [Enterococcus faecalis CH188]
gi|257158936|gb|EEU88896.1| ribokinase [Enterococcus faecalis ARO1/DG]
gi|257159650|gb|EEU89610.1| ribokinase [Enterococcus faecalis T11]
gi|295114311|emb|CBL32948.1| ribokinase [Enterococcus sp. 7L76]
gi|323478906|gb|ADX78345.1| ribokinase [Enterococcus faecalis 62]
gi|427186251|emb|CCO73475.1| ribokinase [Enterococcus faecalis str. Symbioflor 1]
Length = 303
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 4 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 64 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 122 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 181 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 295
>gi|311070100|ref|YP_003975023.1| ribokinase [Bacillus atrophaeus 1942]
gi|419821524|ref|ZP_14345118.1| ribokinase [Bacillus atrophaeus C89]
gi|310870617|gb|ADP34092.1| ribokinase [Bacillus atrophaeus 1942]
gi|388474497|gb|EIM11226.1| ribokinase [Bacillus atrophaeus C89]
Length = 293
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 169/316 (53%), Gaps = 38/316 (12%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA ++L VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAASRLGARVTMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVV--KDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
D GK I D L GV +YM V KD G T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGKAIIDNLKANGVSTEYMEPVIHKDSG--TAHIVL---AEGDNSIVVVKGANDEITP 118
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E + + LE ++K IVL+Q+EIP+ +V RS +P++ + P+ QE +++
Sbjct: 119 E-YAKQALEQIEKIDIVLIQQEIPELTVDEVCSYCRSHDIPIMLNPAPA-RPLKQETIDY 176
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPI 306
L+PNE EA + M + L + AK LF+ EG++ +
Sbjct: 177 ASFLTPNE-----------------HEAAILFPGMTASEALTQYPAK---LFITEGKQGV 216
Query: 307 ------KQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
K+ +IP+ +DTTGAGDTF A+FAV EGK ++ LRFA AAS+ V
Sbjct: 217 RYSDGSKERLIPSFPVEAVDTTGAGDTFNAAFAVALAEGKEIDDALRFANRAASISVCKF 276
Query: 359 GAIPSMPDRKSVLNLL 374
GA MP R+ V LL
Sbjct: 277 GAQGGMPAREEVEELL 292
>gi|118444058|ref|YP_878670.1| ribokinase [Clostridium novyi NT]
gi|118134514|gb|ABK61558.1| ribokinase [Clostridium novyi NT]
Length = 310
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 173/309 (55%), Gaps = 16/309 (5%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++DR+ KVGET+ AK + ++GGKGANQA A+++ +G+VG D
Sbjct: 6 VIGSINMDVVLKVDRMVKVGETIFAKDLKNISGGKGANQAIACARMNSKVSMIGKVGVDG 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+++ + L + DY + KD + TG A++ + ++G NSII+ G NM+ ++
Sbjct: 66 NGQILVNKLKENNINTDY--IFKDKEISTGMALITVDNEGNNSIIVASGANMTIKEDEIN 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ EV+K + IV+ Q E+P ++ K A+ I + AP I +ELL +
Sbjct: 124 KAN-EVIKNSDIVISQFEVPMKTILEGFKLAKKHNKLTILNP----APAKEINKELLKYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E LTG+ EA + G++ V++ LG+KG+A+ + + Q
Sbjct: 179 DIIIPNETEAYELTGVEVTDLNSAKEASKVLLEDGIKCVIITLGSKGAAVITKENSDLVQ 238
Query: 309 SIIPAARVIDTTGAGDTFTASFA----VGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ +DTT AGD+F FA V + ++ ++ ++F +S+ VQ +GA PS+
Sbjct: 239 AF--KVNAVDTTAAGDSFIGGFASKLDVKNITFENIKKSIKFGNMVSSITVQREGAEPSI 296
Query: 365 PDRKSVLNL 373
P K V NL
Sbjct: 297 PYLKEVQNL 305
>gi|256618273|ref|ZP_05475119.1| ribokinase [Enterococcus faecalis ATCC 4200]
gi|256597800|gb|EEU16976.1| ribokinase [Enterococcus faecalis ATCC 4200]
Length = 303
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 4 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 64 DGAGAIMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 122 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 181 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 295
>gi|417985704|ref|ZP_12626286.1| ribokinase [Lactobacillus casei 32G]
gi|410527604|gb|EKQ02467.1| ribokinase [Lactobacillus casei 32G]
Length = 309
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 164/302 (54%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++++ A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRAADLIQSADFVVAEFETPVDATAEAFKIAKAAGRMTILNPAPAQKDLPAALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + + H++G++ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELITGIPVVDEDSMRASAAYYHELGIRGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|116493880|ref|YP_805614.1| ribokinase family sugar kinase [Lactobacillus casei ATCC 334]
gi|227533141|ref|ZP_03963190.1| ribokinase [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|239629364|ref|ZP_04672395.1| sugar kinase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301065479|ref|YP_003787502.1| sugar kinase, ribokinase family [Lactobacillus casei str. Zhang]
gi|417979706|ref|ZP_12620396.1| ribokinase [Lactobacillus casei 12A]
gi|417982534|ref|ZP_12623189.1| ribokinase [Lactobacillus casei 21/1]
gi|417988636|ref|ZP_12629169.1| ribokinase [Lactobacillus casei A2-362]
gi|417995009|ref|ZP_12635316.1| ribokinase [Lactobacillus casei M36]
gi|418015141|ref|ZP_12654722.1| ribokinase [Lactobacillus casei Lpc-37]
gi|116104030|gb|ABJ69172.1| Sugar kinase, ribokinase family [Lactobacillus casei ATCC 334]
gi|227189243|gb|EEI69310.1| ribokinase [Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|239528050|gb|EEQ67051.1| sugar kinase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300437886|gb|ADK17652.1| Sugar kinase, ribokinase family [Lactobacillus casei str. Zhang]
gi|410526979|gb|EKQ01856.1| ribokinase [Lactobacillus casei 12A]
gi|410529758|gb|EKQ04549.1| ribokinase [Lactobacillus casei 21/1]
gi|410539255|gb|EKQ13792.1| ribokinase [Lactobacillus casei M36]
gi|410541266|gb|EKQ15753.1| ribokinase [Lactobacillus casei A2-362]
gi|410552220|gb|EKQ26252.1| ribokinase [Lactobacillus casei Lpc-37]
Length = 309
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 164/302 (54%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++++ A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRAADLIQSADFVVAEFETPVDATAEAFKIAKAAGKMTILNPAPAQKDLPAALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + + H++G++ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELITGIPVVDEDSMRASAAYYHELGIRGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|104781099|ref|YP_607597.1| ribokinase RbsK [Pseudomonas entomophila L48]
gi|95110086|emb|CAK14791.1| putative ribokinase RbsK [Pseudomonas entomophila L48]
Length = 302
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 159/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ RLP+ GET+A ++ T GGKGANQA A+L VG VG+
Sbjct: 5 VVVVGSLNMDLVARAQRLPRGGETLAGESFFTAPGGKGANQAVAVARLGASVAMVGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL GV ++V + GV +G A++++ + QN+I+I+ G N PE
Sbjct: 65 DAYGQQLRQALQTEGVDCQGVSVCE--GVSSGVALIVVDAASQNAIVIIPGGNGLLGPES 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++KA +++ Q E+P + R G VI + P+P E ID
Sbjct: 123 VRRFD-NLLQKAEVIICQLEVPSATVAWTLARGRELGKTVILNPAPASGPLPSEWFAHID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L G+P A + ++G +V+V LGA G AL V+ +
Sbjct: 182 YLIPNESEAEALAGVPVSDQGSARRAAERLRQLGAGKVIVTLGADG-ALLVD---TVGSR 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
PA RV +DTT AGDTF FA G G S EE + F AA+L V GA PS+P
Sbjct: 238 HFPAPRVQPVDTTAAGDTFVGGFAAGLARGLSEEEAIVFGQRAAALSVTRAGAQPSIPYL 297
Query: 368 KSV 370
K +
Sbjct: 298 KEL 300
>gi|257080627|ref|ZP_05574988.1| ribokinase [Enterococcus faecalis E1Sol]
gi|256988657|gb|EEU75959.1| ribokinase [Enterococcus faecalis E1Sol]
Length = 303
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 4 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 64 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 122 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 181 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEVVIITVGSKGAFYDVNG----RSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 295
>gi|256849022|ref|ZP_05554456.1| ribokinase [Lactobacillus crispatus MV-1A-US]
gi|293381280|ref|ZP_06627284.1| ribokinase [Lactobacillus crispatus 214-1]
gi|256714561|gb|EEU29548.1| ribokinase [Lactobacillus crispatus MV-1A-US]
gi|290922179|gb|EFD99177.1| ribokinase [Lactobacillus crispatus 214-1]
Length = 308
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 158/312 (50%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINALDITTAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 64 DSEGNFITHQLKSYGVDTTYVQTTM--GAKTGHAYITLNEAGQNDIIIDHGANYELTVED 121
Query: 190 F---GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
GD ++K V+ Q EIP V ++ K A+ A I + IP+ELL
Sbjct: 122 IRAAGD----LIKSWDCVIAQFEIPLDVTLEAFKIAKKAKKITILNPAPAVDEIPKELLQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ DI++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + P
Sbjct: 178 YTDIITPNETESAKITGIAIKDNSTLATNAEKLHMLGVKNVVITYGDKGAYI----STPD 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ +IP +V DTTGAGDTF S EE + A+ A+S+ VQ GA PS
Sbjct: 234 VEELIPTYKVEAADTTGAGDTFIGYLVSNLNSDLSNFEEAAKIASRASSIAVQRLGAQPS 293
Query: 364 MPDRKSVLNLLQ 375
+P + V ++
Sbjct: 294 IPTEQEVKQAME 305
>gi|260102740|ref|ZP_05752977.1| ribokinase [Lactobacillus helveticus DSM 20075]
gi|260083457|gb|EEW67577.1| ribokinase [Lactobacillus helveticus DSM 20075]
Length = 310
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A + GGKGANQA AK TYF+ +VGE
Sbjct: 6 IVVIGSSNVDTTLHVKDFPKPGETINATEITSAGGGKGANQAIAAAKSGAETYFINRVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L+ GQN III G N E
Sbjct: 66 DSEGGYITHQLKSYGVDTTYVQTTM--GSKTGHAYITLKEAGQNDIIIDHGANYELTVED 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ K V+ Q E P V I+ K A+ AG I + IP+ELL + D
Sbjct: 124 IQAAS-DLFKDVDCVIAQFETPLEVTIEAFKLAKKAGKITILNPAPAIDKIPKELLQYTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + ++
Sbjct: 183 IITPNETESDKITGIQIKDNSTLATNAEKLHLLGVKNVVITYGDKGAYI----SSADIET 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAA------AASLCVQVKGAI 361
++PA +V DTTGAGDTF +G++ + + F AA A+S+ VQ GA
Sbjct: 239 LVPAYKVEATDTTGAGDTF-----IGYLASNLKPDLSNFEAAAKIANRASSIAVQRLGAQ 293
Query: 362 PSMPDRKSVLNLLQ 375
PS+P K V ++
Sbjct: 294 PSIPTAKEVEEAME 307
>gi|398852851|ref|ZP_10609492.1| ribokinase [Pseudomonas sp. GM80]
gi|398242828|gb|EJN28433.1| ribokinase [Pseudomonas sp. GM80]
Length = 305
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 161/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP GET+ + T++GGKGANQA A+L VG
Sbjct: 2 PANVVVIGSLNMDLVTRAPRLPVGGETLIGHSFATVSGGKGANQAVAAARLGAQVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG D G + DAL + ++VV+D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDDYGVQLRDALLAERIDCQAVSVVEDS---SGVALIVVDDNSQNAIVIVAGANGAMT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +V+ Q EIPD+ K AR+ G VI + P+P +
Sbjct: 119 PAVIDRFD-AVLQAADVVICQLEIPDATVGHALKRARALGKTVILNPAPASRPLPADWFT 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS + +A MG +V++ LGA+GS LF G+
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLKSAEKAASHLIAMGAGKVIITLGAQGS-LFANGQG-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GKS E +R+ AA+L V GA PS+P
Sbjct: 236 EHFPAPKVQAVDTTAAGDTFVGGFAAALAAGKSEAEAIRYGQIAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|417020207|ref|ZP_11947228.1| ribokinase [Lactobacillus helveticus MTCC 5463]
gi|328461981|gb|EGF34173.1| ribokinase [Lactobacillus helveticus MTCC 5463]
Length = 308
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A + GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINATEITSAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L+ GQN III G N E
Sbjct: 64 DSEGGYITHQLKSYGVDTTYVQTTM--GSKTGHAYITLKEAGQNDIIIDHGANYELTVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ K V+ Q E P V I+ K A+ AG I + IP+ELL + D
Sbjct: 122 IQAAS-DLFKDVDCVIAQFETPLEVTIEAFKLAKKAGKITILNPAPAIDKIPKELLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + ++
Sbjct: 181 IITPNETESDKITGIQIKDNSTLATNAEKLHLLGVKNVVITYGDKGAYI----SSADIET 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAA------AASLCVQVKGAI 361
++PA +V DTTGAGDTF +G++ + + F AA A+S+ VQ GA
Sbjct: 237 LVPAYKVEATDTTGAGDTF-----IGYLASNLKPDLSNFEAAAKIANRASSIAVQRLGAQ 291
Query: 362 PSMPDRKSVLNLLQ 375
PS+P K V ++
Sbjct: 292 PSIPTAKEVEEAME 305
>gi|227877108|ref|ZP_03995186.1| ribokinase [Lactobacillus crispatus JV-V01]
gi|227863281|gb|EEJ70722.1| ribokinase [Lactobacillus crispatus JV-V01]
Length = 311
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 158/312 (50%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A T GGKGANQA AK TYF+ +VGE
Sbjct: 7 IVVIGSSNVDTTLHVKDFPKPGETINALDITTAGGGKGANQAIAAAKSGAETYFINRVGE 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 67 DSEGNFITHQLKSYGVDTTYVQTTM--GAKTGHAYITLNEAGQNDIIIDHGANYELTVED 124
Query: 190 F---GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
GD ++K V+ Q EIP V ++ K A+ A I + IP+ELL
Sbjct: 125 IRAAGD----LIKSWDCVIAQFEIPLDVTLEAFKIAKKAKKITILNPAPAVDEIPKELLQ 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ DI++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + P
Sbjct: 181 YTDIITPNETESAKITGIAIKDNSTLATNAEKLHMLGVKNVVITYGDKGAYI----STPD 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ +IP +V DTTGAGDTF S EE + A+ A+S+ VQ GA PS
Sbjct: 237 VEELIPTYKVEAADTTGAGDTFIGYLVSNLNSDLSNFEEAAKIASRASSIAVQRLGAQPS 296
Query: 364 MPDRKSVLNLLQ 375
+P + V ++
Sbjct: 297 IPTEQEVKQAME 308
>gi|332637409|ref|ZP_08416272.1| ribokinase [Weissella cibaria KACC 11862]
Length = 306
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 164/300 (54%), Gaps = 11/300 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D + I LP+ GET+A + T GGKGANQA +L F+G VG+
Sbjct: 4 IIVLGSLNADTILHIPHLPQQGETLAMDDASTAPGGKGANQAVAAKRLGADVNFIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+L+ DAL G+ D +V + GV TG A +ML++D N+I+I+GG N
Sbjct: 64 DQNGQLLLDALQADGI--DTAHVAELSGVATGAAYIMLEADSNNTILILGGANRQVNESN 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +K + +++ Q E P + KAA++A V + + IP ELL D
Sbjct: 122 VAAAD-ATIKASDVLIAQFETPMVATLSAFKAAKAADVMTVLNPAPATKDIPAELLALTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL-FVEGEKPIKQ 308
++ PNE+E +TG+P + A + +MG + V++ +G +GS +GE
Sbjct: 181 LVVPNETEAEIITGIPVTDDLSMESAAKRLQEMGAKNVIITVGERGSYFHMADGEN---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+PA +V +DTT AGDTF + + ++ E+ +RFA AAA++ VQ GA PS+P
Sbjct: 237 GFVPALKVKAVDTTAAGDTFIGALTTKLDADMRNVEDAVRFANAAAAITVQGAGAQPSIP 296
>gi|16080645|ref|NP_391473.1| ribokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221311547|ref|ZP_03593394.1| ribokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315874|ref|ZP_03597679.1| ribokinase [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320787|ref|ZP_03602081.1| ribokinase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221325073|ref|ZP_03606367.1| ribokinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402777755|ref|YP_006631699.1| ribokinase [Bacillus subtilis QB928]
gi|3915836|sp|P36945.2|RBSK_BACSU RecName: Full=Ribokinase
gi|1894761|emb|CAB07465.1| ribokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|2636117|emb|CAB15609.1| ribokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|402482934|gb|AFQ59443.1| Ribokinase [Bacillus subtilis QB928]
gi|407962431|dbj|BAM55671.1| ribokinase [Bacillus subtilis BEST7613]
gi|407966444|dbj|BAM59683.1| ribokinase [Bacillus subtilis BEST7003]
Length = 293
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 162/307 (52%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I + L GVR DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ LE ++K +VL+Q+EIP+ +V K S +P+I + P+ QE ++
Sbjct: 120 YALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIILNPAPAR-PLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T ISEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEV 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285
Query: 368 KSVLNLL 374
V LL
Sbjct: 286 NEVEELL 292
>gi|384177224|ref|YP_005558609.1| ribokinase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349596448|gb|AEP92635.1| ribokinase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 293
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 163/307 (53%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I + L GVR+DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAILNNLKANGVRIDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ LE ++K +VL+Q+EIP+ +V K S +P++ + P+ QE ++
Sbjct: 120 YALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIMLNPAPAR-PLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T ISEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEV 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285
Query: 368 KSVLNLL 374
V LL
Sbjct: 286 NEVEELL 292
>gi|385814311|ref|YP_005850704.1| Ribokinase [Lactobacillus helveticus H10]
gi|323467030|gb|ADX70717.1| Ribokinase [Lactobacillus helveticus H10]
Length = 310
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 160/314 (50%), Gaps = 20/314 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A + GGKGANQA AK TYF+ +VGE
Sbjct: 6 IVVIGSSNVDTTLHVKDFPKPGETINATEITSAGGGKGANQAIAAAKSGAETYFINRVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L GQN III G N E
Sbjct: 66 DSEGGYITHQLKSYGVDTTYVQTTM--GSKTGHAYITLNEAGQNDIIIDHGANYELTVED 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ K V+ Q E P V I+ K A+ AG I + IP+ELL + D
Sbjct: 124 IQAAS-DLFKDVDCVIAQFETPLEVTIEAFKLAKKAGKITILNPAPAIDKIPKELLQYTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + ++
Sbjct: 183 IITPNETESDKITGIQIKDNSTLATNAEKLHLLGVKNVVITYGDKGAYI----SSADIET 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAA------AASLCVQVKGAI 361
++PA +V DTTGAGDTF +G++ + + F AA A+S+ VQ GA
Sbjct: 239 LVPAYKVEATDTTGAGDTF-----IGYLASNLKPDLSNFEAAAKIANRASSIAVQRLGAQ 293
Query: 362 PSMPDRKSVLNLLQ 375
PS+P K V ++
Sbjct: 294 PSIPTAKEVEEAME 307
>gi|270290944|ref|ZP_06197167.1| ribokinase [Pediococcus acidilactici 7_4]
gi|270280340|gb|EFA26175.1| ribokinase [Pediococcus acidilactici 7_4]
Length = 303
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 162/305 (53%), Gaps = 10/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++DR+P+ GET+A GGKGANQA A+ T F+G+VG
Sbjct: 5 VVVLGSLNVDRILQMDRVPEPGETLALNNQDMAGGGKGANQAIAAARSGAQTSFIGRVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK + L GV D + V +D G TG A VM++ G+N I+I GG N
Sbjct: 65 DENGKFMLQQLVNSGVTTDLVAVDEDAG--TGQAFVMVEKSGENRILIYGGANAQLSATD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ A +++ Q E P V + A+ GV I + A +P ELL D
Sbjct: 123 VKKAQTQIA-AADLMVAQLETPVETTQFVFQMAKELGVKTILNPAPAVAKLPAELLKNTD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E+ LTG+ + +A + H +GV V++ LG+KG + +G ++
Sbjct: 182 VITPNETEVEILTGIAVTDEAAMLKAAQRLHDLGVATVIITLGSKG-VFYDDG---VQHG 237
Query: 310 IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA R +DTT AGDTF + + S + + + A+SL VQ GA PS+P
Sbjct: 238 IVPAFKVRAVDTTAAGDTFLGALSSELNPDLSNLKTAIEYGNKASSLAVQKMGAQPSIPT 297
Query: 367 RKSVL 371
RK +L
Sbjct: 298 RKDIL 302
>gi|229591587|ref|YP_002873706.1| putative ribokinase [Pseudomonas fluorescens SBW25]
gi|229363453|emb|CAY50658.1| putative ribokinase [Pseudomonas fluorescens SBW25]
Length = 305
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ RLP+ GET+ +T T+ GGKGANQA A+L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRASRLPRAGETLIGQTFSTVPGGKGANQAVASARLGADVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL G+ ++ V DG +G A++++ QN+I+IV G+N
Sbjct: 62 VGTDAYGTQLRDALQVEGIDCQAVSTV-DG--SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q E+P K R G VI + AP+P E
Sbjct: 119 PASLQAFD-AVLQAADVIVCQLEVPMKTVGYALKRGRELGKTVILNPAPASAPLPAEWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A + G +V++ LGA+G ALF +G+
Sbjct: 178 SIDYLIPNESEATALSGVTVDSIDSAKAAATHLIQAGAGKVIITLGAQG-ALFTDGQG-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 236 EHLLAPKVKAVDTTAAGDTFVGGFAAALANGKSEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|384514208|ref|YP_005709301.1| ribokinase [Enterococcus faecalis OG1RF]
gi|327536097|gb|AEA94931.1| ribokinase [Enterococcus faecalis OG1RF]
Length = 305
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ GV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKTGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 297
>gi|168207152|ref|ZP_02633157.1| ribokinase [Clostridium perfringens E str. JGS1987]
gi|169342809|ref|ZP_02863843.1| ribokinase [Clostridium perfringens C str. JGS1495]
gi|169299066|gb|EDS81138.1| ribokinase [Clostridium perfringens C str. JGS1495]
gi|170661443|gb|EDT14126.1| ribokinase [Clostridium perfringens E str. JGS1987]
Length = 310
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 173/313 (55%), Gaps = 20/313 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVFMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ E+
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKEEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+ + I+ K A+ G I + AP I ELL +
Sbjct: 124 SAE-NLIKESDIIISQFETPEDITIEAFKIAKENGKVTILNP----APAKKIKDELLKYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E LTG+ E +A GV+ +++ LG KG+AL G+ +
Sbjct: 179 DIIVPNETEAELLTGIAIKDIEDAKKAGDIFLDKGVKFIIITLGEKGAALI--GKDSCE- 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSRE---ECLRFAAAAASLCVQVKGAIP 362
I+PA RV IDTT AGD+F + + RE +RF +S+ VQ KGA P
Sbjct: 236 -IVPAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGRETLSSSIRFGNKVSSIAVQRKGAQP 294
Query: 363 SMPDRKSVLNLLQ 375
S+P K VL + +
Sbjct: 295 SIPYLKEVLEVYK 307
>gi|397495|emb|CAA81049.1| Ribokinase [Bacillus subtilis subsp. subtilis str. 168]
Length = 286
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 161/301 (53%), Gaps = 20/301 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I + L GVR DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ LE ++K +VL+Q+EIP+ +V K S +P+I + P+ QE ++
Sbjct: 120 YALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIILNPAPA-RPLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T ISEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEV 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A+FAV EGK E LRFA AASL V GA MPD+
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPDK 285
Query: 368 K 368
K
Sbjct: 286 K 286
>gi|256761203|ref|ZP_05501783.1| ribokinase [Enterococcus faecalis T3]
gi|430362828|ref|ZP_19427246.1| ribokinase [Enterococcus faecalis OG1X]
gi|430371782|ref|ZP_19429444.1| ribokinase [Enterococcus faecalis M7]
gi|256682454|gb|EEU22149.1| ribokinase [Enterococcus faecalis T3]
gi|429511927|gb|ELA01548.1| ribokinase [Enterococcus faecalis OG1X]
gi|429514987|gb|ELA04519.1| ribokinase [Enterococcus faecalis M7]
Length = 303
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 4 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 64 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ GV I + +P+ELLN D
Sbjct: 122 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKTGVKTILNPAPALEQVPEELLNVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 181 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 295
>gi|182626104|ref|ZP_02953865.1| ribokinase [Clostridium perfringens D str. JGS1721]
gi|177908625|gb|EDT71146.1| ribokinase [Clostridium perfringens D str. JGS1721]
Length = 310
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 172/317 (54%), Gaps = 28/317 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVFMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ E+
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKEEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+ + I+ K A+ G I + AP I ELL +
Sbjct: 124 SAE-NLIKESDIIISQFETPEDITIEAFKIAKENGKVTILNP----APAKKIKDELLKYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEGEK 304
DI+ PNE+E LTG+ E +A GV+ +++ LG KG+AL F E
Sbjct: 179 DIIVPNETEAELLTGIAIKDIEDAKKAGDIFLDKGVKFIIITLGEKGAALIGKDFCE--- 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSRE---ECLRFAAAAASLCVQVK 358
I+PA RV IDTT AGD+F + + RE +RF +S+ VQ K
Sbjct: 236 -----IVPAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGRETLSSSIRFGNKVSSIAVQRK 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P K VL + +
Sbjct: 291 GAQPSIPYLKEVLEVYK 307
>gi|167758682|ref|ZP_02430809.1| hypothetical protein CLOSCI_01023 [Clostridium scindens ATCC 35704]
gi|167663878|gb|EDS08008.1| ribokinase [Clostridium scindens ATCC 35704]
Length = 325
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 170/318 (53%), Gaps = 13/318 (4%)
Query: 53 RRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAA 112
R+++ V + + ++V+GS N D+ VE +PK GET+ K+ + GGKGANQA
Sbjct: 12 RKEEKEVEQ--MEFKKKILVIGSLNMDLVVETPHMPKAGETITGKSITNVLGGKGANQAY 69
Query: 113 CGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ 172
KL +G VG DA G+ + L V + V+++ +G A + + +G+
Sbjct: 70 AAGKLGGNVGMIGAVGNDACGRALKQNLECVHVDTSGIEVLENE--MSGQAFITVDDNGE 127
Query: 173 NSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
N+III+ GTN E + ++ +K++ I+++Q EIP V A G VI D
Sbjct: 128 NAIIIIAGTNGMVTKEMI-QKHIKKLKESDIIIMQMEIPVETVEYVKDLASKLGKLVIID 186
Query: 233 AGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLG 292
+ +P +D + PNE+EL LTG+ S EQ++ + GV+ V+V LG
Sbjct: 187 PAPAVSNLPDSFFQGVDYMKPNETELEILTGIKIQSQEQVTVGARNMLERGVKNVIVTLG 246
Query: 293 AKGSALFVE-GEK--PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAA 349
+KG L E GE+ P K+ R +DTT AGD+FTA+FA+ EGK+ E ++FA
Sbjct: 247 SKGCLLVTEDGEEFFPAKK-----VRAVDTTAAGDSFTAAFALALSEGKNSREAIQFAQK 301
Query: 350 AASLCVQVKGAIPSMPDR 367
+++ V KGA S+P R
Sbjct: 302 VSAIAVTRKGAQTSIPTR 319
>gi|161507116|ref|YP_001577070.1| ribokinase [Lactobacillus helveticus DPC 4571]
gi|160348105|gb|ABX26779.1| ribokinase [Lactobacillus helveticus DPC 4571]
Length = 308
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 161/314 (51%), Gaps = 20/314 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D + + PK GET+ A + GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVIGSSNVDTTLHVKDFPKPGETINATEITSAGGGKGANQAIAAAKSGAETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G IT L GV Y+ G TGHA + L+ GQN III G N E
Sbjct: 64 DSEGGYITHQLKSYGVDTTYVQTTM--GSKTGHAYITLKEAGQNDIIIDHGANYELTVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ K V+ Q E P V I+ K A+ +G I + IP+ELL + D
Sbjct: 122 IQAAS-DLFKDVDCVIAQFETPLEVTIEAFKLAKKSGKITILNPAPAIDKIPKELLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E ++TG+ ++ K H +GV+ V++ G KG+ + ++
Sbjct: 181 IITPNETESDKITGIQIKDNSTLATNAEKLHLLGVKNVVITYGDKGAYI----SSADIET 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAA------AASLCVQVKGAI 361
++PA +V DTTGAGDTF +G++ + + F AA A+S+ VQ GA
Sbjct: 237 LVPAYKVEATDTTGAGDTF-----IGYLASNLKPDLSNFEAAAKIANRASSIAVQRLGAQ 291
Query: 362 PSMPDRKSVLNLLQ 375
PS+P K V ++
Sbjct: 292 PSIPTAKEVEEAME 305
>gi|257457278|ref|ZP_05622449.1| ribokinase [Treponema vincentii ATCC 35580]
gi|257445200|gb|EEV20272.1| ribokinase [Treponema vincentii ATCC 35580]
Length = 302
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 159/303 (52%), Gaps = 11/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ V + +P GET+ A+T+ T+ GGKGANQA +L T G VG
Sbjct: 4 ILVIGSLNADMVVRVPHIPVAGETILAETADTIPGGKGANQAYAAGRLGAQTVMFGAVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D ++ +L GV + + V D TG A + + G NSI+++ G N + +
Sbjct: 64 DRYAEIEKKSLQSAGVDVSRLLVRAD--CATGLAWITVNDAGNNSIVVIQGANKTLSEKD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D ++++ I+L Q EIP + A+ A+ G I D P EL ++D
Sbjct: 122 IADND-DLLRSCDIILCQLEIPMETVLCAARRAKELGKTFILDPAPAPKVFPPELYAYVD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+EL LTG YE S+ + GV+ V+V LG KG+ FV E K
Sbjct: 181 IIKPNETELALLTGAKVSDYESASDML---RAQGVKNVIVTLGGKGA--FVNSESEGKH- 234
Query: 310 IIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++PA V+DTT AGD+FTA+ AV G S + +R+A AS+ V KGA S+P
Sbjct: 235 LVPARSVPVVDTTAAGDSFTAALAVRLASGSSLLQAVRYANEVASIVVTRKGAQTSIPSA 294
Query: 368 KSV 370
V
Sbjct: 295 AEV 297
>gi|119944129|ref|YP_941809.1| ribokinase [Psychromonas ingrahamii 37]
gi|119862733|gb|ABM02210.1| ribokinase [Psychromonas ingrahamii 37]
Length = 308
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 166/307 (54%), Gaps = 8/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + GGKGANQA A+L F+ +G+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGTGYAVIPGGKGANQAVAAARLGADVAFIACLGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I DA G+ +D + + K+ PTG A++ + + G+NSI I N PE+
Sbjct: 64 DSFGINIRDAFKSDGINVDGVMIEKN--TPTGIAMIQVSATGENSICISAEANNHLTPER 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ A I+L+Q E P A+ A+ AG V+ + + + ELL +D
Sbjct: 122 IKPFS-SLISAAEILLMQLETPIETIQAAAETAKLAGTVVVLNPAPAQS-LSDELLKLVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE-KPIKQ 308
I++PNE+E +LTG+ +A K H G++ V++ LG++G L G+ K IK
Sbjct: 180 IITPNETEAEQLTGVQVKDMPSAQQAAEKLHDKGIEMVMITLGSEGVWLSQAGKGKQIKG 239
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+ A +DTT AGDTF + +E S EE +RFA AAA++ V KGA S+PDR+
Sbjct: 240 FTVKA---VDTTAAGDTFNGALLTRLLEKASVEESIRFAHAAAAITVTGKGAQTSIPDRQ 296
Query: 369 SVLNLLQ 375
SV LQ
Sbjct: 297 SVEKFLQ 303
>gi|418001015|ref|ZP_12641185.1| ribokinase [Lactobacillus casei UCD174]
gi|410548885|gb|EKQ23069.1| ribokinase [Lactobacillus casei UCD174]
Length = 309
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 163/302 (53%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++++ A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRAADLIQSADFVVAEFETPVDATAEAFKIAKAAGKMTILNPAPAQKDLPAALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + + H++G+ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELITGIPVVDEDSMRASAAYYHELGIGGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|398862045|ref|ZP_10617658.1| ribokinase [Pseudomonas sp. GM79]
gi|398231319|gb|EJN17310.1| ribokinase [Pseudomonas sp. GM79]
Length = 305
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 164/306 (53%), Gaps = 10/306 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ K+ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGKSFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ V+D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDAYGEALRGALLAEQIDCQAVSTVEDS---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
PE D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 PEVIDRFD-AVLQAADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + MG +V++ LG++GS LF +G+
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLSTAETAATRLIAMGAGKVIITLGSQGS-LFADGQ--- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ PAA+V +DTT AGDTF FA GK + +RF AA+L V GA PS+
Sbjct: 234 RFEHFPAAKVKAVDTTAAGDTFVGGFAAALAAGKGEADAIRFGQVAAALSVTRAGAQPSI 293
Query: 365 PDRKSV 370
P V
Sbjct: 294 PTLSDV 299
>gi|365851139|ref|ZP_09391580.1| ribokinase [Lactobacillus parafarraginis F0439]
gi|363717338|gb|EHM00716.1| ribokinase [Lactobacillus parafarraginis F0439]
Length = 306
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 167/307 (54%), Gaps = 17/307 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ + I ++PK GET+ A + AGGKGANQA A+ T F+GQVG
Sbjct: 5 VVVLGSLNVDMTLHITQMPKPGETIPAISKTNSAGGKGANQAVAAARSHAQTSFIGQVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + +AL + D+++V + G TG AV++L GQNSI++ GG N S P
Sbjct: 65 DNAGKFMVNALKADQIDTDHISVDEQEG--TGSAVILLDEAGQNSIMVYGGANQSMRPAI 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---ELLN 246
D + ++ A I++ Q E P V + K A++ GV I + AP Q +LL
Sbjct: 123 ISDSE-ALIAGADILISQFETPQGVTYEAFKVAKAHGVTTILNP----APATQIMDDLLE 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D++ PNE+E LTG+ +++ K +G++ +++ +G +G+ P
Sbjct: 178 VTDLIVPNETESATLTGIEVTDLVSMNQNADKFTALGIENLIITVGDRGAYF----HTPA 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ +PA +V DTT AGDTF +F+ + S E L +A A+S+ VQ GA+PS
Sbjct: 234 QSGFVPAFKVKAKDTTAAGDTFIGAFSAQIKKDFSNIEAALTYAQQASSITVQRLGALPS 293
Query: 364 MPDRKSV 370
+P + +
Sbjct: 294 IPTTEEI 300
>gi|321313136|ref|YP_004205423.1| ribokinase [Bacillus subtilis BSn5]
gi|320019410|gb|ADV94396.1| ribokinase [Bacillus subtilis BSn5]
Length = 293
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 162/307 (52%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I + L GVR DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ LE ++K +VL+Q+EIP+ +V K S +P++ + P+ QE ++
Sbjct: 120 YALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIMLNPAPAR-PLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T ISEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEV 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285
Query: 368 KSVLNLL 374
V LL
Sbjct: 286 NKVEELL 292
>gi|145531579|ref|XP_001451556.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419211|emb|CAK84159.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 176/347 (50%), Gaps = 48/347 (13%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GSAN D ++E++ PK GET+A+K S GGKGANQA A L F GQ+G+
Sbjct: 8 ICVLGSANSDHFLEVEDFPKEGETIASKKSYLKNGGKGANQAVASALLKSKIIFAGQIGK 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN-----MS 184
D G+L+ ++ GV L + V + TG A+++L G+N IIIV G N +
Sbjct: 68 DELGQLLVKEMTLAGVDLTALRKVDE---QTGQAIILLNKKGENLIIIVAGANGYYETLD 124
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
P+++ + ++ + ++ LQ E+P S+NI AK + D GG + +
Sbjct: 125 VLPQEYQ----QAIESSDLLQLQMEVPQSINILAAKYMSQNDKITVLDCGGKAEKLKSDF 180
Query: 245 LNFIDILSPNESELGRLTG--MPTDSYEQISEAVVKC-HKMGVQQ-----VLVKLGAKGS 296
L + I+SPNE+EL R+ G + D+ E + K H + VL+KLG+ GS
Sbjct: 181 LEKLTIVSPNETELERILGEDLNMDADSNAEEFLTKTIHDKVFTRYPDLIVLLKLGSNGS 240
Query: 297 ALFVEGEK-------PIKQSIIPAARVIDTTGAGDTFTASFAVGFVE-----GKSREECL 344
L +G + +I+ +++DT GAGD FT++F V F G +R L
Sbjct: 241 MLVTKGYSVRCQTVTQLNPNILEEYKIVDTVGAGDCFTSAFTVSFYNSLIEFGPARISTL 300
Query: 345 R----------------FAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
R F +A+A LC+ GA+PSMP ++V N ++
Sbjct: 301 RKIDVETQKKLFYKAMHFGSASAFLCITKHGAMPSMPKFETVDNFIK 347
>gi|422696665|ref|ZP_16754620.1| ribokinase [Enterococcus faecalis TX1346]
gi|315174725|gb|EFU18742.1| ribokinase [Enterococcus faecalis TX1346]
Length = 305
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAMMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ LLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEALLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLGIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 297
>gi|163847282|ref|YP_001635326.1| ribokinase [Chloroflexus aurantiacus J-10-fl]
gi|222525125|ref|YP_002569596.1| ribokinase [Chloroflexus sp. Y-400-fl]
gi|163668571|gb|ABY34937.1| ribokinase [Chloroflexus aurantiacus J-10-fl]
gi|222449004|gb|ACM53270.1| ribokinase [Chloroflexus sp. Y-400-fl]
Length = 303
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 162/310 (52%), Gaps = 14/310 (4%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VVVGS N D+ V R P+ GETV QT GGKGANQA A+L + VG+V
Sbjct: 3 PTIVVVGSLNMDLVVRAPRHPQPGETVIGSDFQTFPGGKGANQAVAAARLGARVHLVGRV 62
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G DA G + GV D V +D PTG A++ + S GQN+I++ G NM
Sbjct: 63 GVDAFGHTLLATAQEHGV--DTTFVQRDPTAPTGVALITIDSHGQNTIVVAPGANMQVTE 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ V+ A ++L+Q E P V I A+ A GVPV+ + P+P +LL
Sbjct: 121 ADVLRAE-SVLATADMLLMQLECPLEVVIAAARLAHHHGVPVVLNPAPAR-PLPVDLLAL 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+D L PN+ EL L D + A+ + G + V+V L A+ A+ E ++ I
Sbjct: 179 VDFLIPNQLELQALAEGEAD----LRTAIRYLQQRGARNVVVTL-AEAGAVLAEADQIIH 233
Query: 308 QSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ PA V+DT AGD F A+F V GKS +E +R+ AA +L V +GA PS+P
Sbjct: 234 E---PAFEVPVVDTVAAGDAFVAAFCVASASGKSPQEAVRWGNAAGALAVTREGAQPSLP 290
Query: 366 DRKSVLNLLQ 375
+ VL LL+
Sbjct: 291 AYREVLRLLK 300
>gi|350267846|ref|YP_004879153.1| ribokinase [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349600733|gb|AEP88521.1| ribokinase [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 293
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 163/307 (53%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAHVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I D L GVR DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAILDNLKANGVRTDYMEPVTHKKSGTAHIVL---AEGDNSIVVVKGANDDVTP-S 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + L+ ++K +VL+Q+EIP+ +V + S +P++ + P+ QE ++
Sbjct: 120 YAIDALDQIEKVDMVLIQQEIPEETVDEVCRYCHSHDIPIMLNPAPA-RPLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T +SEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPGLT-----VSEALA----LYPAKLFITEGKQG----VRYSAGNKER 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A+ AV EGK E LRFA AASL V GA MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAALAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285
Query: 368 KSVLNLL 374
K V LL
Sbjct: 286 KEVEELL 292
>gi|398977772|ref|ZP_10687320.1| ribokinase [Pseudomonas sp. GM25]
gi|398137541|gb|EJM26589.1| ribokinase [Pseudomonas sp. GM25]
Length = 305
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 157/301 (52%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ RLP+ GET+ + T++GGKGANQA A+L VG VG
Sbjct: 5 VVVIGSLNMDLVTRAPRLPRGGETLIGHSFATVSGGKGANQAVAAARLGAQVSMVGCVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + DAL + ++VV+D +G A++++ + QN+I+IV G N S P
Sbjct: 65 DDYGVQLRDALLAEQIDCQAVSVVEDS---SGVALIVVDDNSQNAIVIVAGANGSMTPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D V++ A +++ Q EIPD+ K R G VI + P+P + ID
Sbjct: 122 IDRFD-AVLQAADVIICQLEIPDATVGHALKRGRELGKTVILNPAPASRPLPADWFAAID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L+G+P DS +A +G +V++ LGA+GS LF G +
Sbjct: 181 YLIPNESEAAALSGLPVDSLATAEKAAAHLMSLGAGKVIITLGAQGS-LFANGTG-YQHF 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF FA GK+ E +RF AA+L V GA PS+P
Sbjct: 239 PAPKVKAVDTTAAGDTFVGGFAAALAAGKTEAEAIRFGQVAAALSVTRAGAQPSIPTTSD 298
Query: 370 V 370
V
Sbjct: 299 V 299
>gi|242372165|ref|ZP_04817739.1| ribokinase [Staphylococcus epidermidis M23864:W1]
gi|242350104|gb|EES41705.1| ribokinase [Staphylococcus epidermidis M23864:W1]
Length = 307
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 162/306 (52%), Gaps = 14/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAA-KTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V+VGS N D ++ ++R PK GET+ + Q GGKGANQA +L T F+ +VG
Sbjct: 6 VVIVGSTNVDKFINVERFPKPGETLHIDQAQQEFGGGKGANQAIAAGRLEAETTFITKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
++ N I D + DY ++ TG A + + +GQN+I++ GG NM+ E
Sbjct: 66 KEGNADFIIDDFKEASINTDY--ILTSENEETGQAFITVTDEGQNTILVYGGANMTLNAE 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNF 247
+ + +++A V+ Q EIP Q K A++ GV I + A +D +P LL+
Sbjct: 124 DVNHGE-QAIREADFVVAQLEIPIEAIEQAFKIAKAHGVTTILNPAPAID--LPDSLLSL 180
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
DI+ PNE+E RL+G+ + + + + G+ VL+ LG +G+ + E
Sbjct: 181 TDIIIPNETEAERLSGISIKNEADMQQTGDYFFERGISTVLITLGEQGTYFATQHES--- 237
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSM 364
I+PA +V IDTT AGDTF +F S E+ +RFA A+SL VQ KGA S+
Sbjct: 238 -HIVPAYQVKAIDTTAAGDTFIGAFVSRLERDLSNLEDAIRFANQASSLTVQRKGAQASI 296
Query: 365 PDRKSV 370
P K V
Sbjct: 297 PTYKEV 302
>gi|417998008|ref|ZP_12638238.1| ribokinase [Lactobacillus casei T71499]
gi|410541796|gb|EKQ16262.1| ribokinase [Lactobacillus casei T71499]
Length = 309
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 163/302 (53%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++++ A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRAADLIQSADFVVAEFETPVDATAEAFKIAKAAGKMTILNPAPAQKDLPAALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E + G+P + + + H++G++ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELIAGIPVVDEDSMRASAAYYHELGIRGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|429204636|ref|ZP_19195922.1| ribokinase [Lactobacillus saerimneri 30a]
gi|428147130|gb|EKW99360.1| ribokinase [Lactobacillus saerimneri 30a]
Length = 315
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 17/303 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D ++R+P+ GET+AA + AGGKGANQA A+ T F+G VG
Sbjct: 5 ITVLGSINLDTTYHVNRMPQPGETIAASNKTSAAGGKGANQAVAAARSGASTAFIGMVGG 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL+ V + + + KD G TG A ++L GQNSI++ GG N P
Sbjct: 65 DDAGQFMRTALAENNVDISNVFIQKDIG--TGSAAIILNQQGQNSIMVYGGANHEITPAT 122
Query: 190 FGDED-LEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
++ ++ + ++ Q E P + + K AR GV I + AP + ELL
Sbjct: 123 INQPAVIDTIRNSDFLIAQFETPQAATLAAFKIAREHGVKTILN----PAPAKEVSAELL 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ D+L PNE+E LTG+ + +++ +GV +L+ LG+KG L+ E +
Sbjct: 179 AYTDLLVPNETESEALTGITITDAKSLAQTGAHFAHLGVHNLLITLGSKGVYLYQEKQA- 237
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIP 362
+++PA +V IDTTGAGDTF S + + EE + + A+SL VQ GA+P
Sbjct: 238 ---TVLPAYKVQAIDTTGAGDTFIGSMTAQLKPDFFNLEEAVNYGQTASSLAVQGLGAMP 294
Query: 363 SMP 365
S+P
Sbjct: 295 SIP 297
>gi|398842571|ref|ZP_10599749.1| ribokinase [Pseudomonas sp. GM102]
gi|398105519|gb|EJL95610.1| ribokinase [Pseudomonas sp. GM102]
Length = 305
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 162/306 (52%), Gaps = 10/306 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGQSFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ V+D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGEALRGALLAEQIDCQAVSTVEDS---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
PE D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 PEVIDRFD-AVLQAADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + MG +V++ LGA+GS L G
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLSSAETAATRLIAMGAGKVIITLGAQGS-LLANGT--- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ PAA+V +DTT AGDTF FA G+S + +RF AA+L V GA PS+
Sbjct: 234 RFEHFPAAKVKAVDTTAAGDTFVGGFAAALAAGQSEADAIRFGQVAAALSVTRAGAQPSI 293
Query: 365 PDRKSV 370
P V
Sbjct: 294 PTLSDV 299
>gi|304385211|ref|ZP_07367556.1| ribokinase [Pediococcus acidilactici DSM 20284]
gi|418069494|ref|ZP_12706771.1| ribokinase [Pediococcus acidilactici MA18/5M]
gi|304328418|gb|EFL95639.1| ribokinase [Pediococcus acidilactici DSM 20284]
gi|357536025|gb|EHJ20056.1| ribokinase [Pediococcus acidilactici MA18/5M]
Length = 303
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 161/305 (52%), Gaps = 10/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++DR+P+ GET+A GGKGANQA A+ T F+G+VG
Sbjct: 5 VVVLGSLNVDRILQMDRVPEPGETLALNNQDMAGGGKGANQAIAAARSGAQTSFIGRVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK + L GV D + V +D G TG A VM++ G+N I+I GG N
Sbjct: 65 DENGKFMLQQLVNSGVTTDLVAVDEDAG--TGQAFVMVEKSGENRILIYGGANAQLSATD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ A +++ Q E P + A+ GV I + A +P ELL D
Sbjct: 123 VKKAQTQIA-AADLMVAQLETPVETTQFAFQMAKELGVKTILNPAPAVAKLPAELLKNTD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E+ LTG+ + +A + H +GV V++ LG+KG + +G ++
Sbjct: 182 VITPNETEVEILTGIAVTDEAAMLKAAQRLHDLGVATVIITLGSKG-VFYDDG---VQHG 237
Query: 310 IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA R +DTT AGDTF + + S + + + A+SL VQ GA PS+P
Sbjct: 238 IVPAFKVRAVDTTAAGDTFLGALSSELNPDLSNLKTAIEYGNKASSLAVQKMGAQPSIPT 297
Query: 367 RKSVL 371
RK +L
Sbjct: 298 RKDIL 302
>gi|110801422|ref|YP_696317.1| ribokinase [Clostridium perfringens ATCC 13124]
gi|168209297|ref|ZP_02634922.1| ribokinase [Clostridium perfringens B str. ATCC 3626]
gi|110676069|gb|ABG85056.1| ribokinase [Clostridium perfringens ATCC 13124]
gi|170712553|gb|EDT24735.1| ribokinase [Clostridium perfringens B str. ATCC 3626]
Length = 310
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 172/317 (54%), Gaps = 28/317 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVFMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ ++
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKDEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+ + I+ K A+ G I + AP I ELLN+
Sbjct: 124 SAE-NLIKESDIIISQFETPEDITIEAFKIAKENGKVTILNP----APAKKIKDELLNYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEGEK 304
DI+ PNE+E LTG+ E +A GV+ ++ LG KG+AL F E
Sbjct: 179 DIIVPNETEAELLTGIEIKYIEDAKKAGDIFLGKGVKFAIITLGEKGAALIGKDFCE--- 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSRE---ECLRFAAAAASLCVQVK 358
I+PA RV IDTT AGD+F + + RE +RF +S+ VQ K
Sbjct: 236 -----IVPAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGRETLSSSIRFGNKVSSIAVQRK 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P K VL + +
Sbjct: 291 GAQPSIPYLKEVLEVYK 307
>gi|390630036|ref|ZP_10258025.1| Ribokinase [Weissella confusa LBAE C39-2]
gi|390484673|emb|CCF30373.1| Ribokinase [Weissella confusa LBAE C39-2]
Length = 306
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 166/300 (55%), Gaps = 11/300 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + I LP+ GET+A + T GGKGANQA ++ F+G VG+
Sbjct: 4 ITVLGSLNADTILHIPHLPQQGETMAMDDASTAPGGKGANQAVAAKRMGGDVNFIGAVGQ 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+L+ DAL GV D +V + GV TG A +ML++D N+I+I+GG N E
Sbjct: 64 DANGQLLLDALKADGV--DTTHVAELEGVATGAAYIMLEADSHNTILILGGANRQVN-ES 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +K + +++ Q E P + K+A+ A V + + IP EL D
Sbjct: 121 NVEAAEDTIKASDVLIAQFETPMVATLNAFKSAKEADVMTVLNPAPATKDIPAELFAVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPIKQ 308
++ PNE+E +TG+P + A + +MG + V++ +G +GS ++ +GE
Sbjct: 181 LVVPNETEAEIITGIPVTDDLSMESAAKRLQEMGAKNVIITVGERGSYFYMADGE----N 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+PA +V +DTT AGDTF + + ++ EE +RFA AAA++ VQ GA PS+P
Sbjct: 237 GFVPALKVKAVDTTAAGDTFIGALTTKLDADMRNVEEAVRFANAAAAITVQGAGAQPSIP 296
>gi|422720481|ref|ZP_16777092.1| ribokinase [Enterococcus faecalis TX0017]
gi|315032314|gb|EFT44246.1| ribokinase [Enterococcus faecalis TX0017]
Length = 305
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ A T GGKGANQA + TYF+G VG
Sbjct: 6 VTIIGSINLDTTLRVKEMPKPGETIHAIEHFTAGGGKGANQAVAAKRSGAETYFIGAVGN 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++TD +S + L + ++ TG A +M+ + G+NSI+I G N + P++
Sbjct: 66 DGAGAIMTDLMSQDEINLTGVTTLEK--TATGQAFIMVDNAGENSIMIYAGANNAFTPKQ 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E E+++K+ V+ Q E I K A+ AGV I + +P+ELLN D
Sbjct: 124 V-QEHQEIIEKSDFVIAQFESAIDSTIAAFKIAKKAGVKTILNPAPALEQVPEELLNVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++ ++ V++ +G+KG+ V G +
Sbjct: 183 MIVPNETETEILTGIKITDEASMRKAAEALHQLEIEAVIITVGSKGAFYDVNG----RSG 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + + S EE +R+ A+SL VQ GA PS+P
Sbjct: 239 IVPAFKVKAVDTTAAGDTFIGALSSILEKDFSNLEEAIRYGNKASSLTVQRFGAQPSIP 297
>gi|409422083|ref|ZP_11259196.1| ribokinase RbsK [Pseudomonas sp. HYS]
Length = 302
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/296 (36%), Positives = 157/296 (53%), Gaps = 5/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ RLP+ GET+ +T T+ GGKGANQA A+L VG VG+
Sbjct: 5 VVVVGSLNMDLVTRAQRLPRGGETLVGETFVTVPGGKGANQAVAAARLGAQVAMVGCVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL+ ++D V GV +G A++++ + QN+I+I+ G N PE
Sbjct: 65 DAYGQQLRQALA--DEQIDCQAVGVAAGVSSGVALIVVDAASQNAIVIIAGGNGQLLPES 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ A +++ Q E+P + + R+ G VI + P+P E ID
Sbjct: 123 VQRFD-ALLQHADVIICQLEVPMATVAYTLERGRALGKTVILNPAPASGPLPAEWFASID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L+G+P E A + +GV +V+V LGA+G ALF +G+ +
Sbjct: 182 YLIPNESEAEALSGVPVTDLESAKVAATRLLALGVGKVIVTLGAQG-ALFADGQA-FRHF 239
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF FA G+ + F AA+L V GA PS+P
Sbjct: 240 SAPVVQPVDTTAAGDTFVGGFAAALARGEEEGAAIAFGQRAAALSVTRAGAQPSIP 295
>gi|398883627|ref|ZP_10638576.1| ribokinase [Pseudomonas sp. GM60]
gi|398196011|gb|EJM83028.1| ribokinase [Pseudomonas sp. GM60]
Length = 305
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRGGETLIGESFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL R+D V G +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGEELRGAL--LADRIDCQAVSTVDGA-SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 PAVIDRFD-AVLQAADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS E A + MG +V++ LGA+GS LF G
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLETAEVAATRLIAMGAGKVIITLGAQGS-LFANGNS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GK+ + +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPKVKAVDTTAAGDTFVGGFAAALAAGKNEAQAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|409990534|ref|ZP_11273895.1| ribokinase [Arthrospira platensis str. Paraca]
gi|291571375|dbj|BAI93647.1| ribokinase [Arthrospira platensis NIES-39]
gi|409938605|gb|EKN79908.1| ribokinase [Arthrospira platensis str. Paraca]
Length = 312
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 166/311 (53%), Gaps = 17/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ V+ RLP+ GETV ++AGGKGANQA A+L T VG+VG
Sbjct: 3 ILVFGSINMDLVVQTPRLPQPGETVTGYNFLSVAGGKGANQAVAAARLGAKTDIVGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA + + + L G R+ V++D +G A + + + G+N III+ G N S
Sbjct: 63 DAFAEELLEELKGN--RVGCKGVLRDNTTHSGLATIAVDNHGENQIIIIPGANGSV---- 116
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G ED++ + ++A +LLQ EIP AA +AGV VI D PQ+L
Sbjct: 117 -GHEDVQRLQPLWEEATSLLLQLEIPLKAVEAAIHAAHNAGVRVILDPAPAPDVFPQQLY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+DI++PNE+E +L G P ++ E +A GV+ ++KLG+KG + E
Sbjct: 176 PLVDIITPNETEASQLVGFPVNNVETAQKAADTLLSFGVKTAVIKLGSKGVFWATKSES- 234
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
++PA V +DT AGD F A EG+S +E + + AA +L GA S
Sbjct: 235 ---FLVPAFAVNAVDTVAAGDAFNGGMAAALDEGRSLKEAILWGAATGALSTTQVGAQSS 291
Query: 364 MPDRKSVLNLL 374
+PDR+++ N+L
Sbjct: 292 LPDRQALDNVL 302
>gi|422346300|ref|ZP_16427214.1| ribokinase [Clostridium perfringens WAL-14572]
gi|373226922|gb|EHP49244.1| ribokinase [Clostridium perfringens WAL-14572]
Length = 310
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 171/317 (53%), Gaps = 28/317 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVLMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ E+
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKEEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+ + I+ K A+ G I + AP I ELL +
Sbjct: 124 SAE-NLIKESDIIISQFETPEDITIEAFKIAKENGKVTILNP----APAKKIKDELLKYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEGEK 304
DI+ PNE+E LTG+ E +A GV+ +++ LG KG+AL F E
Sbjct: 179 DIIVPNETEAELLTGIAIKDIEDAKKAGDIFLDKGVKFIIITLGEKGAALIGKDFCE--- 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSRE---ECLRFAAAAASLCVQVK 358
I+PA RV IDTT AGD+F + + RE +RF +S+ VQ K
Sbjct: 236 -----IVPAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGRETLSSSIRFGNKVSSIAVQRK 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P K VL + +
Sbjct: 291 GAQPSIPYLKEVLEVYK 307
>gi|417991903|ref|ZP_12632274.1| ribokinase [Lactobacillus casei CRF28]
gi|410534844|gb|EKQ09479.1| ribokinase [Lactobacillus casei CRF28]
Length = 309
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 163/302 (53%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++++ A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRAADLIQSADFVVAEFETPVDATAEAFKIAKAAGKMTILNPAPAQKDLPAALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + + H++G++ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELITGIPVVDEDSMRASAAYYHELGIRGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAATCASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|388468673|ref|ZP_10142883.1| ribokinase [Pseudomonas synxantha BG33R]
gi|388012253|gb|EIK73440.1| ribokinase [Pseudomonas synxantha BG33R]
Length = 305
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 157/304 (51%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ RLP+ GET+ ++ T+AGGKGANQA A+L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRASRLPRAGETLIGQSFSTVAGGKGANQAVASARLGASVAMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL G+ ++ V+ +G A++++ QN+I+IV G+N
Sbjct: 62 VGTDAYGSQLRDALLVEGIDCQAVSTVEG---SSGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q E+P K R G VI + P+P +
Sbjct: 119 PASLQACD-AVLQAADVIICQLEVPMDTVGHALKRGRELGKTVILNPAPASGPLPAQWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS + A K G +V++ LGA+G ALF +G
Sbjct: 178 SIDYLIPNESEATALSGVTVDSLDSAKVAATALIKAGAGKVIITLGAQG-ALFADGSS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 236 EHLLAPKVKAVDTTAAGDTFVGGFAAALAAGKSEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|160933003|ref|ZP_02080392.1| hypothetical protein CLOLEP_01845 [Clostridium leptum DSM 753]
gi|156868077|gb|EDO61449.1| ribokinase [Clostridium leptum DSM 753]
Length = 317
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 167/311 (53%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+++VGSAN D+ + + ++P VGETV K+ + L GGKGANQA KL F+ VG
Sbjct: 4 ILIVGSANVDLSIHVKQIPAVGETVLGKSMERLPGGKGANQACAVGKLGGIGCFLCAVGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G LI +L G+ +M + + TG AVV + G+N+II+V G N C
Sbjct: 64 DDAGLLIQKSLKEAGMDPAHMKICEKES--TGMAVVCVSDRGENNIIVVSGANARC---- 117
Query: 190 FGDEDLEVVKKA-----GIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
D D ++A ++LLQ EIP + AK A+S G VI + + P+EL
Sbjct: 118 --DVDYLKAQRALFHDCDLLLLQMEIPLESVVYAAKKAKSLGKTVILNPAPVPENFPEEL 175
Query: 245 LNFIDILSPNESELGRLTGMPT-DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+ D L+PNE EL +L M S E++ +A + + G ++LV LG KG AL++ G+
Sbjct: 176 FQYADYLTPNEVELFKLANMKAGSSMEEVLQAGKRLLRKGANRLLVTLGGKG-ALYL-GK 233
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ P VIDTT AGDTF A+FAV EG + + + +A A+S+ V KGA S
Sbjct: 234 NEERLFAPPEVPVIDTTAAGDTFNAAFAVKLAEGWNVGKAVDYANCASSVTVSRKGAQAS 293
Query: 364 MPDRKSVLNLL 374
+P V L
Sbjct: 294 IPTAYQVQEFL 304
>gi|398935552|ref|ZP_10666510.1| ribokinase [Pseudomonas sp. GM41(2012)]
gi|398169504|gb|EJM57486.1| ribokinase [Pseudomonas sp. GM41(2012)]
Length = 305
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGESFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ V D +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGEELRGALLAEQIDCQAVSTVDDS---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 AEVIDRFD-AVLRAADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + +G +V++ LGA+GS LF G K
Sbjct: 178 SIDYLIPNESEAAALSGLPVDSLASAETAAARLISLGAGKVIITLGAQGS-LFANG-KGF 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GKS + +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPKVKAVDTTAAGDTFVGGFAAALAAGKSEADAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|373462969|ref|ZP_09554629.1| ribokinase [Lactobacillus kisonensis F0435]
gi|371765682|gb|EHO53988.1| ribokinase [Lactobacillus kisonensis F0435]
Length = 305
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 164/299 (54%), Gaps = 11/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D + I ++PK GET++AK+ AGGKGANQA A+ T F+GQVGE
Sbjct: 5 VVVLGSLNVDTTLHIAQMPKPGETISAKSKTNSAGGKGANQAVAAARSGAETSFIGQVGE 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG + DAL + +D+++V G TG AV++L GQNSI++ GG N + P
Sbjct: 65 DGNGTFMIDALKHDRINVDHISVDDTHG--TGSAVILLDEQGQNSIMVYGGANQAMKPAI 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ + I++ + E P +V + V K A+ GV I + A + L D
Sbjct: 123 VASSE-GLIEASDILISEFETPQAVTLAVFKLAKQHGVTTILNPAPA-AKLIDGLAEVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + ++ K KMG++ +++ +G +G+
Sbjct: 181 LIVPNETESASLTGIEVTNQASMAANADKFTKMGIKNLIITIGDRGAYYHT----ATNDG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
+PA +V DTT AGDTF + + + S EE L +A A+S+ VQ GA+PS+P
Sbjct: 237 FVPAFKVQAKDTTAAGDTFIGALSSEINKNLSNIEEALTYAQKASSITVQRLGALPSIP 295
>gi|314934569|ref|ZP_07841928.1| ribokinase [Staphylococcus caprae C87]
gi|313652499|gb|EFS16262.1| ribokinase [Staphylococcus caprae C87]
Length = 307
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 169/311 (54%), Gaps = 14/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V+VGS N D ++ + R PK GET+ +Q GGKGANQA +L T FV +VG
Sbjct: 6 VVIVGSTNVDKFINVTRFPKPGETLHIDQAQREFGGGKGANQAIAAGRLEAETTFVTKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
++ N I + + +Y ++ TG A + + DGQN+I++ GG NM+ +
Sbjct: 66 KEGNADFIIEDFKEASINTEY--ILTADNEETGQAFITVSEDGQNTILVYGGANMTLSAK 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNF 247
+ + + +A V+ Q E+P Q K A++ GV I + A +D +P+ LL F
Sbjct: 124 DVMAAE-QPITEADFVVAQLEVPIEAIEQAFKIAKANGVTTILNPAPAID--LPKSLLAF 180
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
DI+ PNE+E L+G+ + + + E V K+G+ VL+ LG +G+ E E
Sbjct: 181 TDIIIPNETEAELLSGISITNQDSMKETVEYFFKLGISTVLITLGEQGTYYATENEF--- 237
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSM 364
+I+P+ +V IDTT AGDTF +F + S E+ ++FA A+S+ VQ +GA ++
Sbjct: 238 -NIVPSYKVKAIDTTAAGDTFIGAFVSQLNKDLSNLEQAIQFANQASSITVQRQGAQAAI 296
Query: 365 PDRKSVLNLLQ 375
P R V+N+ +
Sbjct: 297 PTRDEVINVYK 307
>gi|443631001|ref|ZP_21115182.1| ribokinase [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443348806|gb|ELS62862.1| ribokinase [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 282
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 160/306 (52%), Gaps = 34/306 (11%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+D G I
Sbjct: 1 MDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAHVFMVGKVGDDHYGTAIL 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
D L GVR DYM V T H V+ ++G NSI++V G N P + + LE
Sbjct: 61 DNLKANGVRTDYMEPVTHKESGTAHIVL---AEGDNSIVVVKGANDDITP-SYAIDALEQ 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++K +VL+Q+EIP+ +V + S +P++ + P+ QE ++ L+PNE
Sbjct: 117 IEKIDMVLIQQEIPEETVDEVCRYCHSHDIPIMLNPAPA-RPLKQETIDHATYLTPNE-- 173
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPI------KQSI 310
EA + ++ V + L AK LF+ EG++ + K+ +
Sbjct: 174 ---------------HEASILFPRLTVSEALALYPAK---LFITEGKQGVRYSAGSKERL 215
Query: 311 IPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
IP+ V +DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP RK
Sbjct: 216 IPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRK 275
Query: 369 SVLNLL 374
V LL
Sbjct: 276 EVEELL 281
>gi|415884931|ref|ZP_11546859.1| ribokinase [Bacillus methanolicus MGA3]
gi|387590600|gb|EIJ82919.1| ribokinase [Bacillus methanolicus MGA3]
Length = 303
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 163/311 (52%), Gaps = 17/311 (5%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T + V+GS N D+ E ++P+ GETV + T+ GGKGANQA A+L +G
Sbjct: 2 TRKKITVIGSINMDLVTETRKIPRAGETVLGDSFHTVPGGKGANQAVAAARLGADVTLIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG+DA G+ + LS G+ +DY+ +V PTG A +++ SDG N II+V G N
Sbjct: 62 CVGQDAFGEELVKHLSNQGIHMDYVRMVAHQ--PTGIASIII-SDGDNRIIVVPGANNQV 118
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
PE +E ++ K+ IVLLQ EIP + + A+ V VI + + A + +EL+
Sbjct: 119 SPE-LVEEHENIIAKSDIVLLQLEIPLKSVEKAIEIAKKHNVKVILNPAPIQA-LSKELV 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQ-ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
ID L+PNE E L ++ EQ + + KC +V G+KG +F GEK
Sbjct: 177 QKIDYLTPNEHEQQELLISASEWSEQEKKDLMAKC--------IVTKGSKGVMIFQNGEK 228
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I + V+DTTGAGDTF + A G EE RFA AA +L V GA M
Sbjct: 229 EISGYKV---EVVDTTGAGDTFNGALAYSLSLGIELEEACRFANAAGALSVTKLGAQGGM 285
Query: 365 PDRKSVLNLLQ 375
P ++ V L+
Sbjct: 286 PTKQEVEEFLE 296
>gi|422874552|ref|ZP_16921037.1| ribokinase [Clostridium perfringens F262]
gi|380304625|gb|EIA16913.1| ribokinase [Clostridium perfringens F262]
Length = 310
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 171/317 (53%), Gaps = 28/317 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVFMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ ++
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKDEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+ + I+ K A+ G I + AP I ELLN+
Sbjct: 124 SAE-NLIKESDIIISQFETPEDITIEAFKIAKENGKVTILNP----APAKKIKDELLNYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEGEK 304
DI+ PNE+E LTG+ E +A GV+ ++ LG KG+AL F E
Sbjct: 179 DIIVPNETEAELLTGIEIKDIEDAKKAGEIFLGKGVKFAIITLGEKGAALIGKDFCE--- 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSRE---ECLRFAAAAASLCVQVK 358
I+PA RV IDTT AGD+F + + RE +RF +S+ VQ K
Sbjct: 236 -----IVPAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGRETLSSSIRFGNKVSSITVQRK 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P VL + +
Sbjct: 291 GAQPSIPYLHEVLEVYK 307
>gi|423336032|ref|ZP_17313783.1| ribokinase [Lactobacillus reuteri ATCC 53608]
gi|337729235|emb|CCC04362.1| ribokinase [Lactobacillus reuteri ATCC 53608]
Length = 307
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 167/308 (54%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +DR P+ GET++A + + GGKGANQA A+ T F+G VG
Sbjct: 5 VVVLGSINVDTTYHVDRFPQPGETISAVSKSSAPGGKGANQAVAAARSGAKTAFIGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + ++L+ +D +++ D TG A + L ++GQN I++ GG N + +
Sbjct: 65 DKEGAYMLESLADD--HIDTRHIMTDELHGTGSAAITLDANGQNDIMVYGGANQAMTTDV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V++ A ++ Q E P V + K A+ GV + + +P ELL + D
Sbjct: 123 LNGID-DVLEDADFLISQFETPQEVALDAFKQAKKHGVTTLLNPAPAHEILP-ELLKYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNESE LTG+ E + ++ + GV+ +L+ LG+KG V P
Sbjct: 181 VITPNESECALLTGIEITDEESMLKSADYFRERGVKHLLITLGSKG----VFYSTPTAHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + S ++ L +A A+SL VQ GA+PS+P+
Sbjct: 237 LVPAFKVKAVDTTAAGDTFLGALSSQLEKDLSNVDKALVYAQRASSLTVQQMGAMPSIPN 296
Query: 367 RKSVLNLL 374
+VL L
Sbjct: 297 HDAVLEAL 304
>gi|416880812|ref|ZP_11921413.1| ribokinase [Pseudomonas aeruginosa 152504]
gi|334836208|gb|EGM15034.1| ribokinase [Pseudomonas aeruginosa 152504]
Length = 308
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 159/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFTTIPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G+N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGSNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|374374778|ref|ZP_09632436.1| ribokinase [Niabella soli DSM 19437]
gi|373231618|gb|EHP51413.1| ribokinase [Niabella soli DSM 19437]
Length = 309
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 162/306 (52%), Gaps = 9/306 (2%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + VVGS N D+ V +R+P GET+ A GGKGANQA A++ FV +V
Sbjct: 4 PKIAVVGSTNMDMVVNAERIPVPGETILASNFFMNPGGKGANQAVAVARMGGDALFVSKV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G+ + + G+ +M + D +P+G A++ + G+NSI++ G N S P
Sbjct: 64 GNDVFGRQSSQLFNEEGIDTRFM--LSDEVLPSGVALITVDQKGENSIVVSQGANNSLLP 121
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
F E L +++ ++L+Q EIP + +AK A S + V+ + + IP ELL +
Sbjct: 122 ADFTSEVLNELEQCNMLLMQFEIPMETILFIAKYAASRNIKVVVNPAPVQ-DIPAELLQY 180
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+ I++PNE+E G LTG S +A + GV V++ LGA+G+ + G +
Sbjct: 181 VHIITPNETEAGLLTGTKVRSLASAQQAAKMIMEKGVPIVIITLGAQGALVCENG----R 236
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
S++PAA V IDTT AGD F + V G E +FA AA+L V +GA S+P
Sbjct: 237 MSVVPAAPVTAIDTTAAGDVFNGALVVALSNGMPIPEATKFACRAAALSVTKEGAQSSIP 296
Query: 366 DRKSVL 371
V+
Sbjct: 297 YYNEVI 302
>gi|210620593|ref|ZP_03292141.1| hypothetical protein CLOHIR_00084 [Clostridium hiranonis DSM 13275]
gi|210155307|gb|EEA86313.1| hypothetical protein CLOHIR_00084 [Clostridium hiranonis DSM 13275]
Length = 305
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 163/305 (53%), Gaps = 7/305 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D +E++ +PK GET+ K+ + + GGKGANQA KL +G VG+
Sbjct: 7 ILVVGSLNLDYVIEVENMPKAGETIFGKSLKKVPGGKGANQAYAIGKLGGDVAMIGAVGD 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ + L V + +K+ TG A + + ++GQN I ++ G N +
Sbjct: 67 DDAGQILLNNLKSVNVDTRGIESIKEN--VTGQAYIYVDANGQNCITVISGAN-AVVDRD 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
D ++E++ + +++Q E+P V A S G VI D A + P L
Sbjct: 124 MIDRNMELIDDSEYIVMQLEVPVDTVKYVKNIAVSKGKKVIIDPAPAIKNP-DVNLWKGC 182
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE EL LTG ++ ++ EAV + HK GV V+ LG G A+ +G K +K
Sbjct: 183 YIIKPNELELATLTGKELNNIKEYKEAVTELHKTGVDYVISTLGGDG-AIMHDG-KNLKS 240
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+V+DTT AGDTFTA + EGKS EE + F +AA++ V KGA S+P R
Sbjct: 241 FDCKKTKVVDTTAAGDTFTAGLVIALNEGKSIEEAIDFGQSAAAIAVSKKGAQTSIPSRD 300
Query: 369 SVLNL 373
+ N+
Sbjct: 301 ELKNI 305
>gi|107101379|ref|ZP_01365297.1| hypothetical protein PaerPA_01002416 [Pseudomonas aeruginosa PACS2]
gi|254235036|ref|ZP_04928359.1| ribokinase [Pseudomonas aeruginosa C3719]
gi|386059158|ref|YP_005975680.1| ribokinase [Pseudomonas aeruginosa M18]
gi|126166967|gb|EAZ52478.1| ribokinase [Pseudomonas aeruginosa C3719]
gi|347305464|gb|AEO75578.1| ribokinase [Pseudomonas aeruginosa M18]
Length = 308
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAEVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P E L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPAEWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|15597146|ref|NP_250640.1| ribokinase [Pseudomonas aeruginosa PAO1]
gi|418585360|ref|ZP_13149412.1| ribokinase [Pseudomonas aeruginosa MPAO1/P1]
gi|418592244|ref|ZP_13156118.1| ribokinase [Pseudomonas aeruginosa MPAO1/P2]
gi|421516597|ref|ZP_15963283.1| ribokinase [Pseudomonas aeruginosa PAO579]
gi|9947947|gb|AAG05338.1|AE004621_9 ribokinase [Pseudomonas aeruginosa PAO1]
gi|375044571|gb|EHS37170.1| ribokinase [Pseudomonas aeruginosa MPAO1/P1]
gi|375048877|gb|EHS41390.1| ribokinase [Pseudomonas aeruginosa MPAO1/P2]
gi|404350325|gb|EJZ76662.1| ribokinase [Pseudomonas aeruginosa PAO579]
Length = 308
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAEVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P E L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPAEWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|49083560|gb|AAT51061.1| PA1950, partial [synthetic construct]
Length = 309
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAEVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P E L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPAEWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|421180856|ref|ZP_15638394.1| ribokinase [Pseudomonas aeruginosa E2]
gi|404544756|gb|EKA53889.1| ribokinase [Pseudomonas aeruginosa E2]
Length = 308
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAEVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P E L +D
Sbjct: 123 LARHE-HMLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPAEWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|77458150|ref|YP_347655.1| ribokinase [Pseudomonas fluorescens Pf0-1]
gi|77382153|gb|ABA73666.1| putative ribokinase [Pseudomonas fluorescens Pf0-1]
Length = 305
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 157/301 (52%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ RLP+ GET+ + T++GGKGANQA A+L VG VG
Sbjct: 5 VVVIGSLNMDLVTRAPRLPRGGETLIGHSFATVSGGKGANQAVAAARLGAQVSMVGCVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + DAL + ++VV+D +G A++++ + QN+I+IV G N S P
Sbjct: 65 DEYGVQLHDALLAEQIDCQAVSVVEDS---SGVALIVVDDNSQNAIVIVAGANGSMTPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D V++ A +++ Q EIPD+ K G VI + P+P + ID
Sbjct: 122 IDRFD-AVLQAADVIICQLEIPDATVGHALKRGHELGKMVILNPAPASRPLPVDWFAAID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L G+P DS E +A +G +V++ LGA+GS LF G +
Sbjct: 181 YLIPNESEAAALCGLPVDSLETAEKAAAHLISLGAGKVIITLGAQGS-LFANGTG-YQYF 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF FA GK+ +E +RF AA+L V GA PS+P
Sbjct: 239 PAPKVKAVDTTAAGDTFVGGFAAALAAGKTEDEAIRFGQVAAALSVTRAGAQPSIPTTSD 298
Query: 370 V 370
V
Sbjct: 299 V 299
>gi|336396270|ref|ZP_08577669.1| ribokinase [Lactobacillus farciminis KCTC 3681]
Length = 302
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 158/304 (51%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D + I RLP GET+A GGKGANQA + T F+ ++G+
Sbjct: 4 IVVLGSINIDTILNIARLPLPGETMAMHDRSIAGGGKGANQAIAAVRAGAETSFIAKIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + D G L+ NV +D TG A ++L GQNSI+I GG N + E
Sbjct: 64 DHAADFMIDTFKNDG--LNIQNVTEDNVAGTGKAYILLDDHGQNSILIYGGANQTITVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ E +K A ++ + E P + + + A++ V I + IP+ELL D
Sbjct: 122 IKNAS-ETIKSADCLITEFETPLEASTEAFRIAKANNVLTILNPAPAKQNIPEELLKLTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + +++A K H MGV+ V++ +GA GS + + E K
Sbjct: 181 IIVPNETEAQAITGIEVVAEPSMAQAAKKMHAMGVKNVIITVGANGS-FYSQSE---KSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+ A +V +DTT AGDTF A S EE ++FA+ A+S+ VQ +GA S+P
Sbjct: 237 FVNAYKVNTVDTTAAGDTFIGYLASKLDSDLSNIEEAMKFASKASSITVQTQGAQNSIPY 296
Query: 367 RKSV 370
K V
Sbjct: 297 VKDV 300
>gi|238024303|ref|YP_002908535.1| Ribokinase [Burkholderia glumae BGR1]
gi|237878968|gb|ACR31300.1| Ribokinase [Burkholderia glumae BGR1]
Length = 309
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 155/299 (51%), Gaps = 12/299 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGSAN D+ V+ RLP GET+ T GGKGANQA A+L +G VG
Sbjct: 1 MLVVGSANMDLTVQAKRLPARGETLLGGDLATFGGGKGANQAVAAARLGASVAMLGCVGA 60
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + D L R+D ++ G +G AV+ + DG N+I++ G N P+
Sbjct: 61 DDFGAQLRDGLQ--AERIDTAHLHTIAGATSGTAVITVAEDGANTIVVSPGANARLAPDH 118
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ E + AG+++ Q E+P D+V VA AAR AG PV+ + P+P L I
Sbjct: 119 V-EAAREAIGAAGLLICQLEVPLDTVLHAVALAAR-AGTPVLLNPAPAQ-PLPDALYRQI 175
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L NE+E L+G+P D EA GVQ V+V LGA+G GE
Sbjct: 176 DFLILNETEAQLLSGLPVDGPASAREAAAWLLAKGVQTVIVTLGAQGVWYAHGGEA---- 231
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+PA RV +DTT AGDTF FA V G S E + F AA+L VQ +GA S+P
Sbjct: 232 GHLPAPRVEAVDTTAAGDTFVGGFAAEHVRGASLREAIEFGQQAAALSVQRQGAQASIP 290
>gi|146345331|gb|ABQ23677.1| sugar kinase [Lactobacillus reuteri]
Length = 305
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +DR P+ GET++A + + GGKGANQA A+ T F+G VG
Sbjct: 5 VVVLGSINVDTTYHVDRFPQPGETISAVSKSSAPGGKGANQAVAAARSGAKTAFIGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + ++L+ +D +++ D TG A + L ++GQN I++ GG N + +
Sbjct: 65 DKEGAYMLESLADD--HIDTRHIMTDKLHGTGSAAITLDANGQNDIMVYGGANQAMTTDV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V++ A ++ Q E P V + K A+ GV + + +P ELL + D
Sbjct: 123 LAGID-DVLEDADFLISQFETPQEVALDAFKQAKKYGVTTLLNPAPAHEILP-ELLKYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNESE LTG+ E + ++ + GV+ +L+ LG+KG V P
Sbjct: 181 VITPNESECALLTGIEITDEESMLKSADYFRERGVKHLLITLGSKG----VFYSTPTAHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + S ++ L +A A+SL VQ GA+PS+P+
Sbjct: 237 LVPAFKVKAVDTTAAGDTFLGALSSQLEKDLSNVDKALVYAQRASSLTVQQMGAMPSIPN 296
Query: 367 RKSVLNLL 374
+V+ L
Sbjct: 297 HDAVIKAL 304
>gi|308810715|ref|XP_003082666.1| Ribokinase (ISS) [Ostreococcus tauri]
gi|116061135|emb|CAL56523.1| Ribokinase (ISS) [Ostreococcus tauri]
Length = 671
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 165/319 (51%), Gaps = 30/319 (9%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLA--GGKGANQAACGAKLS--------HPT 121
VVGS N D+ + +P+ G+TV +T+ T GGKGANQA ++++
Sbjct: 19 VVGSVNVDVIARVGMIPREGDTVVTRTASTTTAMGGKGANQAIAASRMTCEDGGRDWRGV 78
Query: 122 YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGT 181
FVG+ G DA G +A++ V L+Y + G TG VM+ +DG S ++V G
Sbjct: 79 GFVGRFGADAAGDATREAMA-REVDLEY-SARSAIGSATGLGFVMVANDGGTSAVVVPGA 136
Query: 182 NMSCWPEK---FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGV-PVIFDAGGMD 237
N W + DE + ++ ++LQREIP VN+ AK R G ++ DAGG
Sbjct: 137 NALDWNDDDAALEDEFRDALRGTATLMLQREIPHRVNVIAAKIGREMGAHTIVLDAGGSH 196
Query: 238 APIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
+ +LL +D ++PNESEL + G+ D+ SE V C LGA+GS
Sbjct: 197 EVVDGDLLALVDYVAPNESELAGMAGVDVDTLS--SEEAVLC----------TLGARGSL 244
Query: 298 LF-VEGEKPIKQSIIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCV 355
L G S +P AR +D T AGD F A+FAV EGK+ + LRFA AA +L V
Sbjct: 245 LVSASGVARGAPSRLPDGAREVDATAAGDAFRAAFAVAMGEGKNETQALRFAGAAGALAV 304
Query: 356 QVKGAIPSMPDRKSVLNLL 374
GA+PS+P R+ V LL
Sbjct: 305 TKMGAMPSLPTRREVDALL 323
>gi|227363389|ref|ZP_03847515.1| ribokinase [Lactobacillus reuteri MM2-3]
gi|325682003|ref|ZP_08161521.1| ribokinase [Lactobacillus reuteri MM4-1A]
gi|227071578|gb|EEI09875.1| ribokinase [Lactobacillus reuteri MM2-3]
gi|324978647|gb|EGC15596.1| ribokinase [Lactobacillus reuteri MM4-1A]
Length = 326
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +DR P+ GET++A + + GGKGANQA A+ T F+G VG
Sbjct: 24 VVVLGSINVDTTYHVDRFPQPGETISAVSKSSAPGGKGANQAVAAARSGAKTAFIGAVGS 83
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + ++L+ +D +++ D TG A + L ++GQN I++ GG N + +
Sbjct: 84 DKEGAYMLESLADD--HIDTRHIMTDELHGTGSAAITLDANGQNDIMVYGGANQAMATDV 141
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V++ A ++ Q E P V + K A+ GV + + +P ELL + D
Sbjct: 142 LNGID-DVLEDADFLISQFETPQEVALNAFKQAKKYGVTTLLNPAPAHEILP-ELLKYTD 199
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNESE LTG+ E + ++ + GV+ +L+ LG+KG V P
Sbjct: 200 VITPNESECALLTGIEITDEESMLKSADYFRERGVKHLLITLGSKG----VFYSTPTAHG 255
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + S ++ L +A A+SL VQ GA+PS+P+
Sbjct: 256 LVPAFKVKAVDTTAAGDTFLGALSSQLEKDLSNVDKALVYAQRASSLTVQQMGAMPSIPN 315
Query: 367 RKSVLNLL 374
+V+ L
Sbjct: 316 HDAVIKAL 323
>gi|70729475|ref|YP_259213.1| ribokinase [Pseudomonas protegens Pf-5]
gi|68343774|gb|AAY91380.1| ribokinase [Pseudomonas protegens Pf-5]
Length = 305
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 160/301 (53%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ +RLP+ GET+ K+ T++GGKGANQA A+L VG VG+
Sbjct: 5 VVVVGSLNMDLVTRAERLPRGGETLIGKSFATVSGGKGANQAVAAARLGAQVSMVGCVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL + ++VV+ +G A++++ QN+I+IV G N PEK
Sbjct: 65 DAYGEQLRGALLAEQIDCQTVSVVEG---SSGVALIVVDDSSQNAIVIVAGGNGQLTPEK 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D V++ +++ Q E+P + K R G VI + P+P + ID
Sbjct: 122 VAGFD-GVLQDGQVIICQLEVPLATVGYTLKRGRELGKTVILNPAPASGPLPAQWYGAID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L+G+ DS E A + G +V++ LGA+GS LF +G++ +
Sbjct: 181 YLIPNESEASALSGVAVDSLESAEVAASRLIAAGAGKVIITLGAQGS-LFADGQR-FEHF 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + IDTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 239 PAPRVKAIDTTAAGDTFVGGFAAALAAGKSEAEAIRFGQVAAALSVTRAGAQPSIPTLSD 298
Query: 370 V 370
V
Sbjct: 299 V 299
>gi|416858643|ref|ZP_11913435.1| ribokinase [Pseudomonas aeruginosa 138244]
gi|334839242|gb|EGM17933.1| ribokinase [Pseudomonas aeruginosa 138244]
gi|453042923|gb|EME90659.1| ribokinase [Pseudomonas aeruginosa PA21_ST175]
Length = 308
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFTTIPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|227545075|ref|ZP_03975124.1| ribokinase [Lactobacillus reuteri CF48-3A]
gi|338203979|ref|YP_004650124.1| ribokinase [Lactobacillus reuteri SD2112]
gi|227184954|gb|EEI65025.1| ribokinase [Lactobacillus reuteri CF48-3A]
gi|336449219|gb|AEI57834.1| ribokinase [Lactobacillus reuteri SD2112]
Length = 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +DR P+ GET++A + + GGKGANQA A+ T F+G VG
Sbjct: 24 VVVLGSINVDTTYHVDRFPQPGETISAVSKSSAPGGKGANQAVAAARSGAKTAFIGAVGS 83
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + ++L+ +D +++ D TG A + L ++GQN I++ GG N + +
Sbjct: 84 DKEGAYMLESLADD--HIDTRHIMTDKLHGTGSAAITLDANGQNDIMVYGGANQAMTTDV 141
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V++ A ++ Q E P V + K A+ GV + + +P ELL + D
Sbjct: 142 LAGID-DVLEDADFLISQFETPQEVALDAFKQAKKYGVTTLLNPAPAHEILP-ELLKYTD 199
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNESE LTG+ E + ++ + GV+ +L+ LG+KG V P
Sbjct: 200 VITPNESECALLTGIEITDEESMLKSADYFRERGVKHLLITLGSKG----VFYSTPTAHG 255
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + S ++ L +A A+SL VQ GA+PS+P+
Sbjct: 256 LVPAFKVKAVDTTAAGDTFLGALSSQLEKDLSNVDKALVYAQRASSLTVQQMGAMPSIPN 315
Query: 367 RKSVLNLL 374
+V+ L
Sbjct: 316 HDAVIKAL 323
>gi|296330193|ref|ZP_06872674.1| ribokinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676203|ref|YP_003867875.1| ribokinase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296152461|gb|EFG93329.1| ribokinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414447|gb|ADM39566.1| ribokinase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 293
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 162/307 (52%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAHVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I D L GV DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGIAILDNLKANGVCTDYMEPVTHKESGTAHIVL---AEGDNSIVVVKGANDDITP-S 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + L+ ++K +VL+Q+EIP+ +V + S +P++ + P+ QE ++
Sbjct: 120 YAIDALDQIEKVDMVLIQQEIPEETVDEVCRYCHSHDIPIMLNPAPA-RPLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T +SEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPGLT-----VSEALA----LYPAKLFITEGKQG----VRYSAGSKER 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A FAV EGK E LRFA AASL V GA MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAGFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285
Query: 368 KSVLNLL 374
K V LL
Sbjct: 286 KEVEELL 292
>gi|392984575|ref|YP_006483162.1| ribokinase [Pseudomonas aeruginosa DK2]
gi|419754503|ref|ZP_14280864.1| ribokinase [Pseudomonas aeruginosa PADK2_CF510]
gi|384399080|gb|EIE45482.1| ribokinase [Pseudomonas aeruginosa PADK2_CF510]
gi|392320080|gb|AFM65460.1| ribokinase [Pseudomonas aeruginosa DK2]
Length = 308
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFTTIPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETIGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|374993302|ref|YP_004968801.1| ribokinase [Desulfosporosinus orientis DSM 765]
gi|357211668|gb|AET66286.1| ribokinase [Desulfosporosinus orientis DSM 765]
Length = 314
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 168/317 (52%), Gaps = 11/317 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+N PP +VV+GS N D+ V+ R PK GETV + GGKGANQA A+L
Sbjct: 1 MNQPPKVVVIGSLNMDLVVKARRAPKRGETVMGDEIHFIPGGKGANQAVGLARLGAEISM 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+G VG D+ G+ + AL GV + V + TG A ++L ++G NSI++V G N
Sbjct: 61 IGAVGSDSFGRELKRALKKTGVNI--TGVKEHDSQATGVASILL-AEGDNSIVVVPGANA 117
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
C PE D + ++ +A +VLLQ EIP + + A+ G V+ + + + QE
Sbjct: 118 LCLPEDLEDNE-RMIAEADLVLLQLEIPLATVEYGIQLAKKHGKIVMLNPAPAQS-LSQE 175
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL+ +D L+PN SEL L GMP +S +++ + + GV + LGA+G+A F+E E
Sbjct: 176 LLSQVDYLTPNRSELALLAGMPEES--SVAQGINRLLDTGVTCCVTTLGAEGAA-FMEKE 232
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
I + + V+DTTGAGD F A A + KS E FA ++L V GA
Sbjct: 233 GSITKILGHQVPVVDTTGAGDAFNAGLAYALAQQKSIREAAEFAVEVSALAVTKFGAQGG 292
Query: 364 MPDRKSV---LNLLQYA 377
MP + V L QY+
Sbjct: 293 MPRLREVEEHFTLGQYS 309
>gi|309807884|ref|ZP_07701815.1| ribokinase [Lactobacillus iners LactinV 01V1-a]
gi|312874582|ref|ZP_07734606.1| ribokinase [Lactobacillus iners LEAF 2053A-b]
gi|308168864|gb|EFO70951.1| ribokinase [Lactobacillus iners LactinV 01V1-a]
gi|311089812|gb|EFQ48232.1| ribokinase [Lactobacillus iners LEAF 2053A-b]
Length = 312
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 163/314 (51%), Gaps = 13/314 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + I LPK GETVA AGGKGANQA A+ + T FVG+VG+
Sbjct: 4 VTIIGSINVDNIMHIKALPKPGETVAMSAFSQAAGGKGANQAIASARAGNKTVFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + S + Y+NV K TG A ++LQ GQNSIII G N
Sbjct: 64 DSNGEYMLREFSENEIDTAYINVTKKQ--QTGQAYILLQETGQNSIIIQHGANYDLTEAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ + V+ Q E P + I K A AG I + A IP+ELL D
Sbjct: 122 IMQAKDE-IQTSDFVIAQFETPLAPTILAFKLAHQAGKKTILNPAPAKANIPEELLKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ E + + H++G+ V++ LG KG FV K K
Sbjct: 181 LITPNETESEIITGIRVTDLESMKRSAEFYHQLGIDGVIITLGEKG--CFVSTSKVSK-- 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+IPA +V +DTT AGDTF + + + + E +A+ ++S VQ GA PS+P
Sbjct: 237 LIPAFKVKAVDTTAAGDTFIGALSSELQADFANIEASAIYASLSSSFAVQKLGAFPSIPK 296
Query: 367 R---KSVLNLLQYA 377
R ++ L + YA
Sbjct: 297 RDIVEAALKEINYA 310
>gi|430756617|ref|YP_007207897.1| ribokinase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|430021137|gb|AGA21743.1| Ribokinase [Bacillus subtilis subsp. subtilis str. BSP1]
Length = 293
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 161/307 (52%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I + L GV DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAILNNLKANGVCTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ LE ++K +VL+Q+EIP+ +V K S +P++ + P+ QE ++
Sbjct: 120 YALNALEQIEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIMLNPAPAR-PLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T ISEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEV 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285
Query: 368 KSVLNLL 374
V LL
Sbjct: 286 NEVEELL 292
>gi|148543640|ref|YP_001271010.1| ribokinase [Lactobacillus reuteri DSM 20016]
gi|184153054|ref|YP_001841395.1| ribokinase [Lactobacillus reuteri JCM 1112]
gi|148530674|gb|ABQ82673.1| ribokinase [Lactobacillus reuteri DSM 20016]
gi|183224398|dbj|BAG24915.1| ribokinase [Lactobacillus reuteri JCM 1112]
Length = 307
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +DR P+ GET++A + + GGKGANQA A+ T F+G VG
Sbjct: 5 VVVLGSINVDTTYHVDRFPQPGETISAVSKSSAPGGKGANQAVAAARSGAKTAFIGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + ++L+ +D +++ D TG A + L ++GQN I++ GG N + +
Sbjct: 65 DKEGAYMLESLADD--HIDTRHIMTDELHGTGSAAITLDANGQNDIMVYGGANQAMATDV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V++ A ++ Q E P V + K A+ GV + + +P ELL + D
Sbjct: 123 LNGID-DVLEDADFLISQFETPQEVALNAFKQAKKYGVTTLLNPAPAHEILP-ELLKYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNESE LTG+ E + ++ + GV+ +L+ LG+KG V P
Sbjct: 181 VITPNESECALLTGIEITDEESMLKSADYFRERGVKHLLITLGSKG----VFYSTPTAHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + S ++ L +A A+SL VQ GA+PS+P+
Sbjct: 237 LVPAFKVKAVDTTAAGDTFLGALSSQLEKDLSNVDKALVYAQRASSLTVQQMGAMPSIPN 296
Query: 367 RKSVLNLL 374
+V+ L
Sbjct: 297 HDAVIKAL 304
>gi|421899295|ref|ZP_16329660.1| ribokinase protein [Ralstonia solanacearum MolK2]
gi|206590501|emb|CAQ37463.1| ribokinase protein [Ralstonia solanacearum MolK2]
Length = 315
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 155/306 (50%), Gaps = 5/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + LP+ G+TV+A +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPCLPQAGQTVSAPALETIPGGKGANQAVAAARLGSRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V G PTG A V + GQN+I+IV G N P
Sbjct: 75 DPHGTALREGLRREGV--DTAMVTAHAGAPTGIACVTVADSGQNTIVIVAGANRLLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++A +++ Q E P + + + G VI + P+P L D
Sbjct: 133 I-DAQQAAFERAKVIVCQLESPPDAVERALRLGQRLGKTVILNPAPAAGPLPTPWLAACD 191
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E LT P DS E +A H G + V++ LGA+G A +V+ +
Sbjct: 192 YLIPNETEAALLTARPVDSPEAALDAAADLHAQGARHVIITLGARGIA-YVDATSRLLMP 250
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P AR ID T AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 251 AYP-ARAIDATAAGDTFVGALATALAEGAAPAEAIQFGQAAAAVSVTRLGAQPSIPFRSE 309
Query: 370 VLNLLQ 375
+ + +Q
Sbjct: 310 LASPMQ 315
>gi|423692509|ref|ZP_17667029.1| ribokinase [Pseudomonas fluorescens SS101]
gi|388002461|gb|EIK63790.1| ribokinase [Pseudomonas fluorescens SS101]
Length = 305
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 159/300 (53%), Gaps = 8/300 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ +T T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRAGETLIGQTFSTVPGGKGANQAVASARLGASVAMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G DA G + DAL G+ ++ V+ +G A++++ QN+I+IV G+N
Sbjct: 62 IGTDAYGSQLRDALLVEGIDCQAVSTVEGS---SGVALIVVDDSSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
P D V++ A +++ Q E+P D+V + K R G VI + P+P +
Sbjct: 119 PASLRTCD-AVLQAADVIICQLEVPMDTVGYAL-KRGRELGKTVILNPAPASGPLPADWY 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
ID L PNESE L+G+ DS + A K G +V++ LGA+G ALF +G K
Sbjct: 177 ASIDYLIPNESEASALSGVTVDSLDSAKVAATALIKAGAGKVIITLGAQG-ALFADG-KS 234
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ + P + +DTT AGDTF FA G+S +RF AA+L V GA PS+P
Sbjct: 235 FEHLVAPKVKAVDTTAAGDTFVGGFAAALAAGQSEARAIRFGQVAAALSVTRAGAQPSIP 294
>gi|116049901|ref|YP_791290.1| ribokinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|254240334|ref|ZP_04933656.1| ribokinase [Pseudomonas aeruginosa 2192]
gi|313111316|ref|ZP_07797133.1| ribokinase [Pseudomonas aeruginosa 39016]
gi|355648434|ref|ZP_09055483.1| ribokinase [Pseudomonas sp. 2_1_26]
gi|386065800|ref|YP_005981104.1| ribokinase [Pseudomonas aeruginosa NCGM2.S1]
gi|420137708|ref|ZP_14645669.1| ribokinase [Pseudomonas aeruginosa CIG1]
gi|421161024|ref|ZP_15620003.1| ribokinase [Pseudomonas aeruginosa ATCC 25324]
gi|421168398|ref|ZP_15626484.1| ribokinase [Pseudomonas aeruginosa ATCC 700888]
gi|421174923|ref|ZP_15632626.1| ribokinase [Pseudomonas aeruginosa CI27]
gi|115585122|gb|ABJ11137.1| ribokinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126193712|gb|EAZ57775.1| ribokinase [Pseudomonas aeruginosa 2192]
gi|310883635|gb|EFQ42229.1| ribokinase [Pseudomonas aeruginosa 39016]
gi|348034359|dbj|BAK89719.1| ribokinase [Pseudomonas aeruginosa NCGM2.S1]
gi|354827424|gb|EHF11580.1| ribokinase [Pseudomonas sp. 2_1_26]
gi|403249554|gb|EJY63049.1| ribokinase [Pseudomonas aeruginosa CIG1]
gi|404529964|gb|EKA39982.1| ribokinase [Pseudomonas aeruginosa ATCC 700888]
gi|404533320|gb|EKA43151.1| ribokinase [Pseudomonas aeruginosa CI27]
gi|404541363|gb|EKA50727.1| ribokinase [Pseudomonas aeruginosa ATCC 25324]
Length = 308
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFTTIPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|398305074|ref|ZP_10508660.1| ribokinase [Bacillus vallismortis DV1-F-3]
Length = 293
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 162/307 (52%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D PK GETV + QT+ GGKGANQA A+L + VG+VG+
Sbjct: 4 ICVIGSCSMDLVVTSDIRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAHVFMVGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I D L GVR DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAILDNLKANGVRTDYMEPVTYKKSGTAHIVL---AEGDNSIVVVKGANDDITP-S 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + L +++ +VL+Q+EIP+ +V + S +P++ + P+ QE ++
Sbjct: 120 YAIDALNQIERVDMVLIQQEIPEETVDEVCRYCHSHDIPIMLNPAPA-RPLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T +SEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEASILFPELT-----VSEALA----LYPAKLFITEGKQG----VRYSAGSKER 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP+ V +DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R
Sbjct: 226 LIPSFPVEPVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTR 285
Query: 368 KSVLNLL 374
+ + LL
Sbjct: 286 QEIEELL 292
>gi|386760221|ref|YP_006233438.1| ribokinase [Bacillus sp. JS]
gi|384933504|gb|AFI30182.1| ribokinase [Bacillus sp. JS]
Length = 282
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 157/299 (52%), Gaps = 20/299 (6%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+D G I
Sbjct: 1 MDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAIL 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L GVR+DYM V T H V+ ++G NSI++V G N P + LE
Sbjct: 61 NNLKANGVRIDYMEPVTHKESGTAHIVL---AEGDNSIVVVKGANDDITP-AYAIHALEQ 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++K +VL+Q+EIP+ +V K S +P++ + P+ QE ++ L+PNE E
Sbjct: 117 IEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIMLNPAPAR-PLKQETIDHATYLTPNEHE 175
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV- 316
L T ISEA+ + ++ + G +G V K+ +IP+ V
Sbjct: 176 ASLLFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEVLIPSFPVE 222
Query: 317 -IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
+DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R V LL
Sbjct: 223 PVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNEVEELL 281
>gi|383785855|ref|YP_005470424.1| ribokinase [Fervidobacterium pennivorans DSM 9078]
gi|383108702|gb|AFG34305.1| ribokinase [Fervidobacterium pennivorans DSM 9078]
Length = 305
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 165/310 (53%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYFVGQVG 128
+ +VGS+N DI + ++ GET + GGKGANQA A+LS P YF+ VG
Sbjct: 2 IAIVGSSNIDIVLTVEHFTNPGETQRITKLEYFPGGKGANQAVAIARLSEKPVYFLTAVG 61
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D GK++T+ + Y V G+ TG A + + G+N III G N +C +
Sbjct: 62 DDQYGKILTENYERENIH-GYRVV---SGISTGMAFIEVCLSGENRIIIYPGAN-ACLTQ 116
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNF 247
+ + E + KA I+L+Q EIP + + A VIFD A D I E+ +
Sbjct: 117 EMVLDSKEELLKANILLVQNEIPFETTLYACAMFKEASKIVIFDPAPAQD--IRPEIFRY 174
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+D L+PNE EL L+ D++ I ++ K +K+G++ ++VKLG KG A +V+ +
Sbjct: 175 VDFLTPNEEELNALSKTFFDNFVSIEDSFEKFNKLGLKAMIVKLGDKG-ATYVDSNRLFN 233
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
IP +V +DTT AGD F + AV EGK E +R+A A++ V KGA PS+P
Sbjct: 234 ---IPTIKVTAVDTTAAGDVFNGALAVALSEGKDLAEAIRYANICAAISVTRKGAQPSIP 290
Query: 366 DRKSVLNLLQ 375
R V L+
Sbjct: 291 KRIEVEEFLK 300
>gi|398876286|ref|ZP_10631443.1| ribokinase [Pseudomonas sp. GM67]
gi|398204691|gb|EJM91487.1| ribokinase [Pseudomonas sp. GM67]
Length = 305
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 159/304 (52%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T++GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRASRLPRGGETLIGESFATVSGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL R+D V G +G A++++ ++ QN+I+IV G N +
Sbjct: 62 VGSDAYGEELRGAL--LADRIDCQAVSTVDGA-SGVALIVVDNNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 SAVIDRFD-AVLQAADVIICQLEVPDATVGHALKRGRELGKTVILNPAPASRPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS E A + MG +V++ LGA+GS LF G
Sbjct: 178 AIDYLIPNESEASALSGLPVDSLETAEVAATRLIAMGAGKVIITLGAQGS-LFANGSS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GK+ + +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPKVKAVDTTAAGDTFVGGFAAALAAGKNEAQAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|312870444|ref|ZP_07730564.1| ribokinase [Lactobacillus oris PB013-T2-3]
gi|417885644|ref|ZP_12529797.1| ribokinase [Lactobacillus oris F0423]
gi|311094001|gb|EFQ52325.1| ribokinase [Lactobacillus oris PB013-T2-3]
gi|341595228|gb|EGS37892.1| ribokinase [Lactobacillus oris F0423]
Length = 305
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 169/312 (54%), Gaps = 25/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I R+P GET+AA+ + AGGKGANQA A+ T F+G+VG+
Sbjct: 4 VTIVGSLNVDTTLRIKRMPLPGETLAAEGKSSAAGGKGANQAVSAARSGAQTAFIGEVGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G+++ D + G+ D + ++ V TG A ++L +GQNSI+I GG N P
Sbjct: 64 DNSGQMMLDEMKANGI--DVAGIRENDQVGTGTASILLDENGQNSILIYGGANQQLSP-- 119
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
D+E K A V+ Q E P + ++ + A++ GV I + AP I
Sbjct: 120 ---TDVEAAKDKITAADFVVAQFETPQAATLRAFQLAKANGVTTILNP----APAQKIDP 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
E+L D++ PNE+E LTG+ + + K +MGV+ +++ +GAKG+ +
Sbjct: 173 EVLKLTDLIIPNETESAELTGVIITDETSMLISAAKFAQMGVRNLIITVGAKGAFYCTQD 232
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKG 359
S IPA +V +DTT AGDTF + + S E+ L +A A+SL VQ G
Sbjct: 233 ----GYSFIPAFKVNAVDTTAAGDTFIGALSSQLKPDMSNIEKALVYAQRASSLAVQKMG 288
Query: 360 AIPSMPDRKSVL 371
A+PS+P R+ +L
Sbjct: 289 ALPSIPTREQIL 300
>gi|334705011|ref|ZP_08520877.1| ribokinase [Aeromonas caviae Ae398]
Length = 310
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L P F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAPVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMKTGFANDGI--DVSAVELDPRLPTGIAIIYVSDEGENSIGISAEANGALTPAV 121
Query: 190 F-GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
G E + + A +LLQ E+P + A+ AR+ G V+ + P+ ++LL +
Sbjct: 122 VQGHEAM--IAAAHTLLLQLEVPLESVQEAARLARAHGTRVVLNPAPAR-PLSRDLLALV 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D+++PN++E LTG+ EA + H+MG+ +V++ LG++G V K KQ
Sbjct: 179 DLITPNQTEAELLTGVKVTDEASAREAATRFHQMGIGEVMITLGSQG----VYCSKGQKQ 234
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+++P RV +DTT AGDTF +F + G + +RFA AA+L V GA S+P
Sbjct: 235 ALMPGFRVKAVDTTAAGDTFNGAFLAAELAGADFDAAVRFAHGAAALSVTRFGAQSSIPS 294
Query: 367 RKSV 370
++ V
Sbjct: 295 KQEV 298
>gi|334117641|ref|ZP_08491732.1| ribokinase [Microcoleus vaginatus FGP-2]
gi|333460750|gb|EGK89358.1| ribokinase [Microcoleus vaginatus FGP-2]
Length = 306
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 162/312 (51%), Gaps = 17/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ + RLP+ GET+ T GGKGANQA A+L T+ +G+VG
Sbjct: 3 IIVFGSINIDLAAKTPRLPQPGETIIGSNFFTAGGGKGANQAVAAARLGTSTHIIGRVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + + L G+ D NV+ D +G A++ + GQN+II++ G N
Sbjct: 63 DKFAEELLTNLQSYGLSTD--NVLIDQNTHSGVAIIAVDETGQNNIIVIPGAN-----NN 115
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G+ DLE ++K A +LLQ EIP + + AKAAR AGV VI D A +P EL
Sbjct: 116 VGEADLERLQKLLTPATSLLLQLEIPLEIVQKAAKAARQAGVRVILDPAPARADLPIELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE E G+L G + E A + + GV+ V+VKLG +G+ E
Sbjct: 176 PLIDIITPNEVEAGQLVGFRVNDTETAIVAAKQLQERGVKNVIVKLGDRGAVAVTADET- 234
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+PA V IDT AGD F A G S E +R+ AAA +LC GA +
Sbjct: 235 ---FFVPAFAVEAIDTVAAGDAFNGGLASALDAGLSLSEAVRWGAAAGALCTTKVGAQVA 291
Query: 364 MPDRKSVLNLLQ 375
MPDR + LQ
Sbjct: 292 MPDRATFDKFLQ 303
>gi|83745730|ref|ZP_00942787.1| Ribokinase [Ralstonia solanacearum UW551]
gi|207743640|ref|YP_002260032.1| ribokinase protein [Ralstonia solanacearum IPO1609]
gi|83727420|gb|EAP74541.1| Ribokinase [Ralstonia solanacearum UW551]
gi|206595039|emb|CAQ61966.1| ribokinase protein [Ralstonia solanacearum IPO1609]
Length = 315
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 155/306 (50%), Gaps = 5/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + LP+ G+TV+A +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPCLPQAGQTVSAPALETIPGGKGANQAVAAARLGSRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V G PTG A V + GQN+I+IV G N P
Sbjct: 75 DPHGTALREGLRREGV--DTAMVTAHAGAPTGIACVTVADSGQNTIVIVAGANRLLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++A +++ Q E P + + + G VI + P+P L D
Sbjct: 133 I-DAQQAAFERAKVIVCQLESPPDAVERALQLGQRLGKTVILNPAPAAGPLPTPWLAACD 191
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E LT P DS E +A H G + V++ LGA+G A +V+ +
Sbjct: 192 YLIPNETEAALLTARPVDSPEAALDAAADLHAQGARHVIITLGARGIA-YVDATSRLLMP 250
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P AR ID T AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 251 AYP-ARAIDATAAGDTFVGALATALAEGAAPAEAIQFGQAAAAVSVTRLGAQPSIPFRSE 309
Query: 370 VLNLLQ 375
+ + +Q
Sbjct: 310 LASPMQ 315
>gi|344170645|emb|CCA83068.1| ribokinase [blood disease bacterium R229]
Length = 315
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 157/307 (51%), Gaps = 7/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + RLP G+TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPRLPYPGQTVAAPALETIPGGKGANQAVAAARLGGRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V G PTG A V + GQN+I+IV G N P
Sbjct: 75 DPHGTALREGLRREGV--DTAMVTAHAGAPTGIACVTVADSGQNTIVIVAGANRQLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D ++A I++ Q E P D+V + R G VI + P+P L
Sbjct: 133 I-DAQQAAFERAKIIVCQLESPLDAVERALLLGQR-LGKTVILNPAPAAGPLPTPWLAAC 190
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE+E LT P DS E A H G + V++ LGA+G A +V+ +
Sbjct: 191 DYLIPNETEAALLTARPVDSPEAALAAADDLHAQGARHVIITLGARGIA-YVDATTRLLM 249
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P A+ IDTT AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 250 PAHP-AQAIDTTAAGDTFVGALATALAEGAAPAEAIQFGQAAAAVSVTRLGAQPSIPFRS 308
Query: 369 SVLNLLQ 375
+ + +Q
Sbjct: 309 ELASPVQ 315
>gi|395241725|ref|ZP_10418732.1| Ribokinase [Lactobacillus pasteurii CRBIP 24.76]
gi|394481081|emb|CCI84972.1| Ribokinase [Lactobacillus pasteurii CRBIP 24.76]
Length = 305
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 166/305 (54%), Gaps = 11/305 (3%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D + +DR+P+ GET+ ++ + GGKGANQA + F+G VG+DA
Sbjct: 6 VLGSINVDTTLHVDRIPQPGETIHVQSKSSAGGGKGANQAVSAIRNGAKVKFIGSVGKDA 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
+G ++ D L G+ D V++D TG A ++L +GQNSI++ G+N S
Sbjct: 66 DGVMMRDLLKAEGI--DIECVLEDEKNSTGTATILLDEEGQNSILVYPGSNDSIRKSDI- 122
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
DE E ++ I++ Q E P ++ K A+ V I + + I ELL D++
Sbjct: 123 DEMKEELETLDILIAQFETPKEATLEAFKIAKENEVITILNPAPA-SEIASELLAVTDVI 181
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSII 311
+PNE+E LTG+ +S E + + H+ GV VL+ LG++G +F+ + + II
Sbjct: 182 APNETEAEVLTGIKVESVEDMHKVASYFHEKGVSVVLITLGSRG--VFLSSKDT--EKII 237
Query: 312 PAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
PA +V +DTT AGDTF S A V+ + EE + + A+S+ VQ GAIPS+P
Sbjct: 238 PAFKVKPVDTTAAGDTFIGSMASKLKVDLSNIEEAIVYGQQASSIAVQKPGAIPSIPKED 297
Query: 369 SVLNL 373
V +
Sbjct: 298 EVTRI 302
>gi|266620947|ref|ZP_06113882.1| ribokinase [Clostridium hathewayi DSM 13479]
gi|288867407|gb|EFC99705.1| ribokinase [Clostridium hathewayi DSM 13479]
Length = 310
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 161/307 (52%), Gaps = 9/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V ++++P VGETV AGGKGANQA L +G VG+
Sbjct: 5 ILVVGSLNMDMSVNLEKIPTVGETVLGNDLSYRAGGKGANQACAAGLLGGEVRMLGCVGK 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L GV Y+ D PTG AV+ + S G N+I+++ G N C E
Sbjct: 65 DEFGEKQIENLKKAGVDTSYLKKSDD--QPTGTAVICVDSHGDNNIVVIPGANKECDAE- 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ E+ + V+LQ EIP + A A+ AG VI + +P+EL +D
Sbjct: 122 YLKRQRELFEWCDYVVLQMEIPYDSVLCAAMMAKEAGKTVILNPAPAPDELPEELCRNVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE+EL +L+G+ S + + + + G V+V LG KG+ L +GE +
Sbjct: 182 YLTPNETELMKLSGVTDCSVSSMKKGAMILLEKGAGCVIVTLGEKGALLVKKGE----EC 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ PA +V +DTT AGD F +FA EG L FA AA+++ V KGA S+P R
Sbjct: 238 LYPAKKVKAVDTTAAGDCFNGAFAAALAEGMKEGAALGFANAASAIAVTRKGAQESLPAR 297
Query: 368 KSVLNLL 374
+ + + L
Sbjct: 298 EELKDYL 304
>gi|194468198|ref|ZP_03074184.1| ribokinase [Lactobacillus reuteri 100-23]
gi|194453051|gb|EDX41949.1| ribokinase [Lactobacillus reuteri 100-23]
Length = 307
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +DR P+ GET++A + + GGKGANQA A+ T F+G VG
Sbjct: 5 VVVLGSINVDTTYHVDRFPQPGETISAVSKSSAPGGKGANQAVAAARSGAKTAFIGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + ++L+ +D +++ D TG A + L ++GQN I++ GG N + +
Sbjct: 65 DKEGAYMLESLADD--HIDTRHIMTDELHGTGSAAITLDANGQNDIMVYGGANQAMTTDV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V++ A ++ Q E P V + K A+ GV + + +P ELL + D
Sbjct: 123 LNGID-DVLEDADFLISQFETPQEVALDAFKQAKKHGVTTLLNPAPAHEILP-ELLKYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNESE LTG+ + + ++ + GV+ +L+ LG+KG V P
Sbjct: 181 VITPNESECALLTGIEITDEKSMLKSADYFRERGVKHLLITLGSKG----VFYSTPTAHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + + S ++ L +A A+SL VQ GA+PS+P+
Sbjct: 237 LVPAFKVKAVDTTAAGDTFLGALSSQLEKDLSNVDKALVYAQRASSLTVQQMGAMPSIPN 296
Query: 367 RKSVLNLL 374
+VL L
Sbjct: 297 HDAVLEAL 304
>gi|224477901|ref|YP_002635507.1| ribokinase [Staphylococcus carnosus subsp. carnosus TM300]
gi|222422508|emb|CAL29322.1| ribokinase [Staphylococcus carnosus subsp. carnosus TM300]
Length = 304
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 168/306 (54%), Gaps = 8/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R K GET+ + Q + GGKGANQA A++ T F+ +VG
Sbjct: 5 VVILGSTNVDQFLTVERYAKPGETLHVEKGQKSYGGGKGANQAIATARMGAETTFISKVG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D + D G+ +DY +++ TG A + + ++G N+I + GG NM+ PE
Sbjct: 65 KDGLADFMFDDFKEAGMNIDY--ILESETEDTGQAFITVDAEGSNTIYVYGGANMAITPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D+ +K+A + Q E+P IQ K AR AGV + + + +P+ELL+ I
Sbjct: 123 DV-DKAASKIKEADYIAAQLEVPVPAIIQAFKIAREAGVTTVLNPAPAE-KLPEELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D++ PNE E L+G+P + +++ +G++ V++ LG +G+ VEG+ + +
Sbjct: 181 DVIVPNEFEAEILSGIPVTDEKSMAQNADYFLDLGIKVVVITLGEQGTYYAVEGDSGLVK 240
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ + +DTT AGDTF +F GF V + E + +A AASL VQ GA S+P
Sbjct: 241 AY--TVQTVDTTAAGDTFIGAFVSGFGVSKMNLVEAIDYANKAASLTVQKPGAQASIPLA 298
Query: 368 KSVLNL 373
V N+
Sbjct: 299 SEVDNI 304
>gi|187918882|ref|YP_001887913.1| ribokinase [Burkholderia phytofirmans PsJN]
gi|187717320|gb|ACD18543.1| ribokinase [Burkholderia phytofirmans PsJN]
Length = 310
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 154/304 (50%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ LP+ GET+ +AGGKG NQA A++ VG VG+
Sbjct: 10 VLVVGSINTDLVARAPHLPRPGETIGGHEFSQVAGGKGGNQAVAAARIGAQVAMVGCVGK 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG L G+ D + G PTG A+V + DGQN+I++V G+N PE
Sbjct: 70 DANGAQRVKDLEAEGI--DCSGIEVHPGQPTGVAMVTVSDDGQNTIVVVAGSNGELTPES 127
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ +K +V+ Q E P DSV+ +A AR G + + P+P E L +
Sbjct: 128 VARHE-AAIKACDVVVCQLETPWDSVHATLAL-ARRLGKITVLNPAPATGPLPAEWLPLV 185
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE E L G+P +S A + + G + V+V LGA+G+ L VEG + +
Sbjct: 186 DYLVPNEVEAAILAGLPVESQSGARRAATELQQGGARNVIVTLGAQGAYLLVEGGEGMH- 244
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
PA +V +DTT AGDTF FA + E + A AAS+ V GA PS+P
Sbjct: 245 --FPAPQVQAVDTTAAGDTFIGVFAAQLASRQPLESAISLAQRAASISVTRAGAQPSIPT 302
Query: 367 RKSV 370
R V
Sbjct: 303 RAEV 306
>gi|152988239|ref|YP_001348702.1| ribokinase [Pseudomonas aeruginosa PA7]
gi|150963397|gb|ABR85422.1| ribokinase [Pseudomonas aeruginosa PA7]
Length = 308
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 157/303 (51%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFATIPGGKGANQAVAAARLGAQVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D + + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLHRALQAEGI--DCQGIERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATREVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + MG +V+V LGA+G+ L EG +
Sbjct: 182 YLIPNETESELLCRLPVDSLESAGRAAERLRAMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|403236469|ref|ZP_10915055.1| ribokinase [Bacillus sp. 10403023]
Length = 313
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 158/304 (51%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V + + P+ GET+ + T GGKG NQA +KL +G VG+
Sbjct: 5 IVVVGSLNVDMVVNVKKRPEWGETIMGRDFFTGNGGKGGNQAYAASKLGASVAMLGCVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + + L+ GV D + K GV +G AV+ + S+G+NSII+ G N PE
Sbjct: 65 DIFGEQLLNGLNEVGV--DTSGIEKVQGVSSGVAVISVNSEGENSIIVSPGANDHVTPEY 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ +++ A +V++Q EIP I+VAK A VPV+ D AP +P EL
Sbjct: 123 VKRHE-QIIIAAKLVMMQLEIPLETVIEVAKIAHKHNVPVMLDP----APAVKLPDELYQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ + PNESELG +T + E A K K GV V KLG KG + E E
Sbjct: 178 KVSYIVPNESELGVITDLKISDKETAKTASEKLMKQGVGTVFAKLGGKGVLVSKETESFF 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + A +DTT AGD+F + A V GKS +E FA +L V KGA SMP
Sbjct: 238 VEPHVVTA--VDTTAAGDSFAGALATALVSGKSLQEATEFANTVGALTVTKKGAQVSMPT 295
Query: 367 RKSV 370
+ V
Sbjct: 296 LEEV 299
>gi|259502772|ref|ZP_05745674.1| ribokinase [Lactobacillus antri DSM 16041]
gi|259169275|gb|EEW53770.1| ribokinase [Lactobacillus antri DSM 16041]
Length = 306
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 161/305 (52%), Gaps = 13/305 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D ++R P+ GET+AA++ + GGKGANQA A+ T F+G VG
Sbjct: 5 VVVLGSINVDTTYHVERFPQPGETIAARSKSSAPGGKGANQAVAAARSGAQTAFIGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + +AL + D +V D TG A V L ++GQN I+I GG N + +
Sbjct: 65 DSEGDYMLEALKENAI--DVRHVAIDQYHGTGSAAVTLDANGQNDIMIYGGANQALTTDV 122
Query: 190 F-GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
G ED V+ A ++ Q E P +V + K A+ GV I + IP ELL +
Sbjct: 123 LAGAED--VLDGADFLISQFETPQAVTLAAFKLAKKHGVTTILNPAPAHDIIP-ELLQYT 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D+++PNESE LTG+ E + ++ GV +LV LG+KG V P
Sbjct: 180 DVIAPNESECALLTGIEIADEESMLKSAEYFRSQGVSHLLVTLGSKG----VFYATPAGH 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
++PA +V +DTT AGDTF + + + S E L +A A+SL VQ GA+PS+P
Sbjct: 236 GLVPAFKVKAVDTTAAGDTFIGALSSQLNDDLSNVAEALVYAQRASSLTVQQMGAMPSIP 295
Query: 366 DRKSV 370
V
Sbjct: 296 TADQV 300
>gi|398848137|ref|ZP_10604967.1| ribokinase [Pseudomonas sp. GM84]
gi|398249671|gb|EJN35052.1| ribokinase [Pseudomonas sp. GM84]
Length = 302
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 156/296 (52%), Gaps = 5/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ +RLP+ GET+A ++ T+ GGKGANQA A+L VG VG+
Sbjct: 5 VLVVGSLNMDLVARAERLPRAGETLAGESFSTVPGGKGANQAVAVARLGGSVAMVGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL G+ + V + GV +G A++ + + QN I+I+ G N PE
Sbjct: 65 DAYGEQLRKALEVEGIDCQAVGVCQ--GVSSGMALITVDASSQNCIVIIAGGNGLLTPET 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ A +++ Q E+P + AR+ G VI + P+P E ID
Sbjct: 123 VQRFD-GLLQAAEVIVCQLEVPAATVGWTLARARALGKRVILNPAPATGPLPAEWFANID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG D + A ++G +V+V LGA+G ALFV + +
Sbjct: 182 YLIPNEHEAEALTGQSVDDLDSARRAAECLLQLGAGKVIVTLGAQG-ALFVS-QDGSRHF 239
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF FA V+GK E + F AA+L V GA PS+P
Sbjct: 240 PAPQVKPLDTTAAGDTFVGGFAAALVQGKEEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|239628068|ref|ZP_04671099.1| ribokinase [Clostridiales bacterium 1_7_47_FAA]
gi|239518214|gb|EEQ58080.1| ribokinase [Clostridiales bacterium 1_7_47FAA]
Length = 319
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 163/313 (52%), Gaps = 17/313 (5%)
Query: 68 PPLVVVGSANFD-IYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P ++VVGS N D I ++R+PK+GE++ + + GGKG+NQA + Y VG+
Sbjct: 6 PKILVVGSMNMDLIMYNVERIPKMGESIYCTGYEYVTGGKGSNQAYAASMQGADAYLVGR 65
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D NG+ + L GV + VV+D G TG + + + +DG I G N
Sbjct: 66 IGTDDNGRALMKQLEEAGVDTSF--VVRDEGHLTGLSTMNIDADGNYFSIFASGANDHIK 123
Query: 187 PEKFGDEDLEVVKKA---GIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
PE D+E +V++Q E+P Q AR +PV DAG IP E
Sbjct: 124 PE-----DVERAMDQVDFDMVVMQLEMPLETVYQTYGMARQREIPVFLDAGPA-MSIPLE 177
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCH-KMGVQQVLVKLGAKGSALFVEG 302
L I I+SPNE+E LTG+ D+ EA + K + VL+KLG++G+ L+
Sbjct: 178 RLRGIFIISPNEAETAALTGIVPDTKAHTEEAARWLYEKAAPRYVLLKLGSRGALLYDGR 237
Query: 303 E-KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
E K +K + A +DTT AGDTF A+ AV + +G E +R+ AAA++CV KG
Sbjct: 238 EMKWVKGYHVDA---VDTTAAGDTFGAALAVQYCKGADMETAIRYGHAAAAICVMRKGGH 294
Query: 362 PSMPDRKSVLNLL 374
PS+P K V L
Sbjct: 295 PSIPTAKEVERFL 307
>gi|312873259|ref|ZP_07733315.1| ribokinase [Lactobacillus iners LEAF 2052A-d]
gi|311091270|gb|EFQ49658.1| ribokinase [Lactobacillus iners LEAF 2052A-d]
Length = 312
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 163/314 (51%), Gaps = 13/314 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + I LPK GETVA AGGKGANQA A+ + T FVG+VG+
Sbjct: 4 VTIIGSINVDNIMHIKALPKPGETVAMSAFSQAAGGKGANQAIASARAGNKTVFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + S + Y+NV K TG A ++LQ GQNSIII G N
Sbjct: 64 DSNGEYMLREFSENEINTAYINVTKKQ--QTGQAYILLQETGQNSIIIQHGANYDLTEAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ + V+ Q E P + I K A AG I + A IP+ELL D
Sbjct: 122 IMQAKDE-IQTSDFVIAQFETPLAPTILAFKLAHQAGKKTILNPAPAKANIPEELLKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ + + + H++G+ V++ LG KG FV K K
Sbjct: 181 LITPNETESEIITGIRVTDLDSMKRSAEFYHQLGIDGVIITLGEKG--CFVSTSKVSK-- 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+IPA +V +DTT AGDTF + + + + E +A+ ++S VQ GA PS+P
Sbjct: 237 LIPAFKVKAVDTTAAGDTFIGALSSELQADFANIEASAIYASLSSSFAVQKLGAFPSIPK 296
Query: 367 R---KSVLNLLQYA 377
R ++ L + YA
Sbjct: 297 RDIVEAALKEINYA 310
>gi|407713224|ref|YP_006833789.1| ribokinase [Burkholderia phenoliruptrix BR3459a]
gi|407235408|gb|AFT85607.1| ribokinase [Burkholderia phenoliruptrix BR3459a]
Length = 298
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 154/302 (50%), Gaps = 7/302 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ RLP GET+A +T +AGGKG NQA A+L +G VG
Sbjct: 1 MAVVGSLNMDLVARAPRLPHPGETLAGRTFAQVAGGKGGNQAVAAARLGAQVSMLGCVGA 60
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG + L G+ + ++ P+G A++++ QN+I+IV G+N PE
Sbjct: 61 DANGAQLRAGLEAEGIDCAALETGRE---PSGVALIVVDDASQNAIVIVAGSNGEVTPET 117
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ V+ A +V+ Q E P D+V+ +A A R VI + P+P E L I
Sbjct: 118 IARHE-AVLAAADVVICQLETPPDAVHAALAAARRLRKT-VILNPAPATGPLPAEWLPLI 175
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE E LTG+P S E+ + A G + VLV LG +G +EG P+
Sbjct: 176 DYLIPNELEAATLTGLPVGSPEEAATAAAVLRAAGARNVLVTLGPRGVQAALEGAAPVLY 235
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P +DTT AGDTF FA EG + +RFA AA+L V GA PS+P R
Sbjct: 236 D-APKVEAVDTTAAGDTFIGGFAAQLAEGAGVDAAIRFAQRAAALSVTRAGAQPSIPTRA 294
Query: 369 SV 370
+
Sbjct: 295 EL 296
>gi|223041791|ref|ZP_03611982.1| ribokinase [Actinobacillus minor 202]
gi|223017417|gb|EEF15837.1| ribokinase [Actinobacillus minor 202]
Length = 310
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 165/307 (53%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + PK GET+ Q GGKGANQA A++ F+G +G+
Sbjct: 5 LCVLGSINVDHVIRVPYFPKAGETLTGYGYQIAYGGKGANQAVAAARVGAKVCFIGAIGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + A G+ ++V+ + TG A++ + G+NSI+I G N E
Sbjct: 65 DQIGQTMKQAFEQDGIDTSAISVIPNQ--STGLAMIQVADSGENSIVISAGANAD-LSES 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++A I+L+Q E P K A+SAGV V+ + P+P LL+ ID
Sbjct: 122 LVEQHKSQIEQADILLMQLESPLQAVTLATKFAKSAGVKVVLNPAPAQ-PLPDSLLSHID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ + A H++G++ VL+ LG+KG +G+
Sbjct: 181 IITPNETEAEILTGVKVTDEQTAIVAANHFHQLGIEVVLITLGSKGVYYSEKGQG----E 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IIP RV +DT AGDTF +F +EGKS ++ +RFA AAA++ V GA ++P+R
Sbjct: 237 IIPGFRVDAVDTIAAGDTFNGAFVTALLEGKSAKDAIRFAHAAAAISVTRMGAQTAIPNR 296
Query: 368 KSVLNLL 374
K V L
Sbjct: 297 KEVEQFL 303
>gi|428314080|ref|YP_007125057.1| ribokinase [Microcoleus sp. PCC 7113]
gi|428255692|gb|AFZ21651.1| ribokinase [Microcoleus sp. PCC 7113]
Length = 310
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 170/314 (54%), Gaps = 20/314 (6%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
P++V GS N D+ + RLP GET+ T GGKGANQA A+L T VG++G
Sbjct: 3 PIIVFGSINMDLVAKTPRLPVAGETIKGDEFFTAGGGKGANQAVAAARLGISTQIVGRLG 62
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G+ + L GV+ D V+ D +G AV+ + G+N+III+ G N
Sbjct: 63 NDDFGRQLLRHLQAAGVQTD--GVLVDEATSSGVAVITVDDAGENNIIIIAGAN-----G 115
Query: 189 KFGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQE 243
+ + D+E ++ A +L+Q EIP + A+AA SAGVPVI D A D IP E
Sbjct: 116 RLNETDVERLRSKLPGAAALLMQLEIPMTTVQLAAQAAHSAGVPVILDPAPAQD--IPDE 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
L + IDI++PN+ E +L G P D E ++A + + GV V+VKLG +G +F
Sbjct: 174 LYSRIDIITPNQLEASQLVGFPVDGEEAAAKASAELQQRGVSTVIVKLGDRG--VFCATA 231
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ + +PA V +DT AGD F + AV +G+S E + + AAA +L GA
Sbjct: 232 E--ETFFVPAFSVQAVDTVAAGDAFNGALAVALAQGRSLREAVVWGAAAGALSATKAGAQ 289
Query: 362 PSMPDRKSVLNLLQ 375
PS+PDRK+ L+
Sbjct: 290 PSLPDRKTFETFLK 303
>gi|241895105|ref|ZP_04782401.1| ribokinase [Weissella paramesenteroides ATCC 33313]
gi|241871823|gb|EER75574.1| ribokinase [Weissella paramesenteroides ATCC 33313]
Length = 309
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 164/305 (53%), Gaps = 9/305 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V++GS N D+ ++DRLP VGET++ + T GGKGANQA A+ F+G VGE
Sbjct: 4 VVIIGSLNIDVLQKLDRLPTVGETISINSKSTNFGGKGANQAVAAARQGATVSFIGGVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ D L+ G+ D + VPTG A +ML+ +G N+I++ GG NM+
Sbjct: 64 DPEGRSYIDLLNEEGIHTD---AIYTKSVPTGTAYIMLEKNGHNTILVYGGANMALSRAD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D+ +++K A +V+ Q E+P + + A G I + + + ++L D
Sbjct: 121 I-DQAQDLIKHADVVVAQLEVPQDAIKRGFELAHQYGAKTILNPAPVTDHVDPDILKNTD 179
Query: 250 ILSPNESELGRLTGM-PTDSYEQ-ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+L PNE+E L G+ PT YE+ ++ + + ++ V++ LG G+ + G+ +
Sbjct: 180 LLVPNETEAAALLGLEPTTDYEKLVARTPLFKDNLAIENVIITLGEHGAFYTIHGKPGLI 239
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+S A IDTT AGDTF + A S EE L+ A+ A+S+ V GAIP++P
Sbjct: 240 KSF--KADAIDTTAAGDTFIGTIAATLAADLSNIEETLKKASIASSIVVSRPGAIPAIPY 297
Query: 367 RKSVL 371
+ ++
Sbjct: 298 QDEIV 302
>gi|309803183|ref|ZP_07697280.1| ribokinase [Lactobacillus iners LactinV 11V1-d]
gi|312871626|ref|ZP_07731718.1| ribokinase [Lactobacillus iners LEAF 3008A-a]
gi|312871956|ref|ZP_07732038.1| ribokinase [Lactobacillus iners LEAF 2062A-h1]
gi|315653680|ref|ZP_07906600.1| ribokinase [Lactobacillus iners ATCC 55195]
gi|325911712|ref|ZP_08174119.1| ribokinase [Lactobacillus iners UPII 143-D]
gi|325912964|ref|ZP_08175337.1| ribokinase [Lactobacillus iners UPII 60-B]
gi|329921065|ref|ZP_08277588.1| ribokinase [Lactobacillus iners SPIN 1401G]
gi|308164691|gb|EFO66941.1| ribokinase [Lactobacillus iners LactinV 11V1-d]
gi|311092533|gb|EFQ50895.1| ribokinase [Lactobacillus iners LEAF 2062A-h1]
gi|311092851|gb|EFQ51203.1| ribokinase [Lactobacillus iners LEAF 3008A-a]
gi|315489042|gb|EFU78684.1| ribokinase [Lactobacillus iners ATCC 55195]
gi|325476478|gb|EGC79637.1| ribokinase [Lactobacillus iners UPII 143-D]
gi|325477644|gb|EGC80783.1| ribokinase [Lactobacillus iners UPII 60-B]
gi|328934972|gb|EGG31461.1| ribokinase [Lactobacillus iners SPIN 1401G]
Length = 312
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 163/314 (51%), Gaps = 13/314 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + I LPK GETVA AGGKGANQA A+ + T FVG+VG+
Sbjct: 4 VTIIGSINVDNIMHIKALPKPGETVAMSAFSQAAGGKGANQAIASARAGNKTVFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + S + Y+NV K TG A ++LQ GQNSIII G N
Sbjct: 64 DSNGEYMLREFSENEIDTAYINVTKKQ--QTGQAYILLQETGQNSIIIQHGANYDLTEAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ + V+ Q E P + I K A AG I + A IP+ELL D
Sbjct: 122 IMQAKDE-IQTSDFVIAQFETPLAPTILAFKLAHQAGKKTILNPAPAKANIPEELLKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ E + + H++G+ V++ LG KG FV K K
Sbjct: 181 LITPNETESEIITGIRVTDLESMKRSAEFYHQLGIGGVIITLGEKG--CFVSTSKVSK-- 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+IPA +V +DTT AGDTF + + + + E +A+ ++S VQ GA PS+P
Sbjct: 237 LIPAFKVKAVDTTAAGDTFIGALSSELQADFANIEASAIYASLSSSFAVQKLGAFPSIPK 296
Query: 367 R---KSVLNLLQYA 377
R ++ L + YA
Sbjct: 297 RDIVEAALKEINYA 310
>gi|300692024|ref|YP_003753019.1| ribokinase [Ralstonia solanacearum PSI07]
gi|299079084|emb|CBJ51746.1| Ribokinase [Ralstonia solanacearum PSI07]
Length = 315
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 157/307 (51%), Gaps = 7/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + RLP G+TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPRLPYPGQTVAAPALETIPGGKGANQAVAAARLGGRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V G PTG A V + GQN+I+IV G N P
Sbjct: 75 DPHGTALREGLRREGV--DTAMVTAHAGAPTGIACVTVADSGQNTIVIVAGANRQLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D ++A +++ Q E P D+V + R G VI + P+P L
Sbjct: 133 I-DAQQAAFERAKVIVCQLESPLDAVERALLLGQR-LGKTVILNPAPAAGPLPTPWLAAC 190
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE+E LT P DS E A H G + V++ LGA+G A +V+ +
Sbjct: 191 DYLIPNETEAALLTARPVDSPEAALAAADDLHAQGARHVIITLGARGIA-YVDATTRLLM 249
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P A+ IDTT AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 250 PAHP-AQAIDTTAAGDTFVGALATALAEGAAPAEAIQFGQAAAAVSVTRLGAQPSIPFRS 308
Query: 369 SVLNLLQ 375
+ + +Q
Sbjct: 309 ELASPVQ 315
>gi|423094551|ref|ZP_17082347.1| ribokinase [Pseudomonas fluorescens Q2-87]
gi|397887775|gb|EJL04258.1| ribokinase [Pseudomonas fluorescens Q2-87]
Length = 304
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 157/299 (52%), Gaps = 6/299 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVARAPRLPRGGETLIGESFCTIPGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL G+ ++ V DG +G A++++ + QN+I+IV G N +
Sbjct: 62 VGSDAYGQQLRGALLAEGIDCQAVSAV-DG--SSGVALIVVDDNSQNAIVIVAGANGALI 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P+ D EV++ A +V+ Q E+PD+ K AR G VI + +P +
Sbjct: 119 PDVLDRFD-EVLQGADVVICQLEVPDATVGYALKRARELGKIVILNPAPASHALPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D L PNESE L+ + DS E A G +V+V LGA+G +F G
Sbjct: 178 CVDYLIPNESEAAVLSALAVDSLETAESAAAHLIAAGAGKVIVTLGAQG-LMFANGAS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ P + +DTT AGDTF FA GKS E +RF AAA+L V GA PS+P
Sbjct: 236 EHFPAPRVKAVDTTAAGDTFVGGFAAALASGKSEVEAIRFGQAAAALSVTRAGAQPSIP 294
>gi|330810601|ref|YP_004355063.1| ribokinase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423698248|ref|ZP_17672738.1| ribokinase [Pseudomonas fluorescens Q8r1-96]
gi|327378709|gb|AEA70059.1| ribokinase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388004661|gb|EIK65928.1| ribokinase [Pseudomonas fluorescens Q8r1-96]
Length = 304
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 156/299 (52%), Gaps = 6/299 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGESFSTIPGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + + L G+ ++VV+ +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDAYGEQLRNGLLAEGIDCQAVSVVEGA---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E D EV++ A +V+ Q E+PD+ K AR G VI + +P +
Sbjct: 119 AEVLDSVD-EVLQSADVVICQLEVPDATVGHALKRARELGKIVILNPAPASRRLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+ + DS E A G +V+V LGA+G +F G
Sbjct: 178 CIDYLIPNESEAAVLSELAVDSLETAEAAAAHLIAAGAGKVIVTLGAQG-LMFANGAS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ P + +DTT AGDTF FA GKS + +RF AAA+L V GA PS+P
Sbjct: 236 EHFPAPRVKAVDTTAAGDTFVGGFAAALASGKSEVDAIRFGQAAAALSVTRAGAQPSIP 294
>gi|452913591|ref|ZP_21962219.1| ribokinase [Bacillus subtilis MB73/2]
gi|452118619|gb|EME09013.1| ribokinase [Bacillus subtilis MB73/2]
Length = 282
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 156/299 (52%), Gaps = 20/299 (6%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+D G I
Sbjct: 1 MDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAIL 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L GVR DYM V T H V+ ++G NSI++V G N P + LE
Sbjct: 61 NNLKANGVRTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-AYALNALEQ 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++K +VL+Q+EIP+ +V K S +P+I + P+ QE ++ L+PNE E
Sbjct: 117 IEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIILNPAPAR-PLKQETIDHATYLTPNEHE 175
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV- 316
L T ISEA+ + ++ + G +G V K+ +IP+ V
Sbjct: 176 ASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEVLIPSFPVE 222
Query: 317 -IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
+DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R V LL
Sbjct: 223 PVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNEVEELL 281
>gi|199597760|ref|ZP_03211187.1| Sugar kinase, ribokinase family protein [Lactobacillus rhamnosus
HN001]
gi|418071758|ref|ZP_12709031.1| ribokinase [Lactobacillus rhamnosus R0011]
gi|423077807|ref|ZP_17066498.1| ribokinase [Lactobacillus rhamnosus ATCC 21052]
gi|199591376|gb|EDY99455.1| Sugar kinase, ribokinase family protein [Lactobacillus rhamnosus
HN001]
gi|357538050|gb|EHJ22072.1| ribokinase [Lactobacillus rhamnosus R0011]
gi|357553092|gb|EHJ34851.1| ribokinase [Lactobacillus rhamnosus ATCC 21052]
Length = 313
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 161/302 (53%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDAILHIQRLPQPGETIQMDAFSKAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L + Y+ D TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGELVKNQIDTQYVATTAD--TETGQAYILLQASGQNSIIIQHGANFELT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P +++ A V+ + E P + + K A++AG I + +P+ LL
Sbjct: 120 PADV-QRATGLIQSADFVVAELETPVAATAEAFKIAKAAGKVTILNPAPAQKELPEALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + ++ H++G++ V++ LG+KGS + ++G+
Sbjct: 179 NVDLIAPNETESELITGIPVTDEASMRQSAAYYHQLGIRGVVITLGSKGSFISLDGQA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPS 363
+++PA +V +DTT AGDTF + + + + +A+ A+S VQ GA PS
Sbjct: 237 --TLVPAFKVKAVDTTAAGDTFIGALVSNLQPDLGNIVDAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|17545732|ref|NP_519134.1| ribokinase [Ralstonia solanacearum GMI1000]
gi|17428026|emb|CAD14715.1| putative ribokinase protein [Ralstonia solanacearum GMI1000]
Length = 315
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 154/306 (50%), Gaps = 5/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + LP+ G+TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPCLPRPGQTVAAPALETIPGGKGANQAVASARLGSRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V G PTG A V + +GQN+I+IV G N P
Sbjct: 75 DPHGMALREGLLREGV--DTAMVTAHAGAPTGIACVTVADNGQNTIVIVAGANRQLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++A +++ Q E P + + G VI + P+P L D
Sbjct: 133 I-DAQRAAFERAKVIVCQLESPPDAVERALLLGQRLGKTVILNPAPAAGPLPTPWLAACD 191
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E LT DS E A H G + V+V LGA+G A +V+ +
Sbjct: 192 YLIPNETEAALLTARRVDSPEAALNAAADLHAQGARHVIVTLGARGVA-YVDATTRLLMP 250
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P A+ IDTT AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 251 AHP-AQAIDTTAAGDTFVGALATALAEGAAPVEAIQFGLAAAAVSVTRLGAQPSIPFRSE 309
Query: 370 VLNLLQ 375
+ + +Q
Sbjct: 310 LASPVQ 315
>gi|410723614|ref|ZP_11362848.1| ribokinase [Clostridium sp. Maddingley MBC34-26]
gi|410603078|gb|EKQ57523.1| ribokinase [Clostridium sp. Maddingley MBC34-26]
Length = 311
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 162/306 (52%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D+ ++ PK GET+ + +T GGKGANQA +L VG+VGE
Sbjct: 4 LCVIGSLNMDLVTAVEEFPKPGETILGNSFKTFPGGKGANQAVALGRLGAKVIMVGKVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L V + ++V K G+ +G AV+ + G+N+III+ G N + K
Sbjct: 64 DIYGSKYLEVLKDNNVNYNCLHVEK--GISSGIAVIQVNYRGENNIIIIPGANGAV-DIK 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + + +A I L Q EIP I K ++ G +I D AP +P E+
Sbjct: 121 YIESKWNTIVEADIFLFQLEIPMITVIDTMKKLKNRGKTIILDP----APATKLPDEIFK 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ID ++PNE+E+ LTG+ S E++ +A GV+ V+ KLG+KG+A+ E
Sbjct: 177 YIDYITPNETEIEALTGINIKSEEELKKAAQVLLDKGVKVVIPKLGSKGAAIIKMNE--- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IP +V +DTT AGD+F A FA + K EEC++F A ++ GA +M
Sbjct: 234 -YTNIPGFKVNTVDTTAAGDSFNAGFAFALAQDKPLEECVKFGNAVGAISTTALGAQEAM 292
Query: 365 PDRKSV 370
P ++V
Sbjct: 293 PTFEAV 298
>gi|253682816|ref|ZP_04863611.1| ribokinase [Clostridium botulinum D str. 1873]
gi|416355179|ref|ZP_11681774.1| ribokinase [Clostridium botulinum C str. Stockholm]
gi|253561015|gb|EES90469.1| ribokinase [Clostridium botulinum D str. 1873]
gi|338195275|gb|EGO87578.1| ribokinase [Clostridium botulinum C str. Stockholm]
Length = 310
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 174/313 (55%), Gaps = 20/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ ++++R+ KVGET+ A + + GGKG+NQA ++++ + +G+VG
Sbjct: 4 ICVIGSINMDVVLKVNRMVKVGETIFANDLKNIPGGKGSNQAIACSRMNANVFMIGKVGV 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG ++ L + +Y + KD V TG A++ + + NSII+ G+NM+ E+
Sbjct: 64 DGNGDILVSKLKENNINTEY--IFKDDKVSTGTAIITVDHEANNSIIVASGSNMTITEEE 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++K + IV+ Q E+P + ++ K A+ I + AP I +ELL
Sbjct: 122 I-NRTYNIIKNSDIVISQFEVPMRIILKGFKIAKENNRITILNP----APAKEINRELLK 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ DI+ PNE+E LTG+ + +A K GV+ V++ LG+KG+A+ +
Sbjct: 177 YTDIIIPNETEAFELTGIEVTDLDSAKKAAYVLMKEGVKCVIITLGSKGAAVITKEH--- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA----VGFVEGKSREECLRFAAAAASLCVQVKGA 360
I+PA +V IDTT AGD+F FA + + ++ ++ ++F +S+ VQ +GA
Sbjct: 234 -SDIVPAFKVNAIDTTAAGDSFIGGFASKIDINNMSFENIKKSIKFGNMVSSIAVQREGA 292
Query: 361 IPSMPDRKSVLNL 373
PS+P + + N+
Sbjct: 293 EPSIPYLEDIKNI 305
>gi|421152069|ref|ZP_15611660.1| ribokinase [Pseudomonas aeruginosa ATCC 14886]
gi|404526055|gb|EKA36292.1| ribokinase [Pseudomonas aeruginosa ATCC 14886]
Length = 308
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|170695181|ref|ZP_02886328.1| ribokinase [Burkholderia graminis C4D1M]
gi|170139801|gb|EDT07982.1| ribokinase [Burkholderia graminis C4D1M]
Length = 307
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 150/301 (49%), Gaps = 5/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ RLP GET+A +T +AGGKG NQA A+L +G VG
Sbjct: 10 VAVVGSLNMDLVARAPRLPHPGETLAGRTFAQVAGGKGGNQAVAAARLGAQVSMLGCVGA 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG + L G+ + ++ TG A++++ QN+I+IV G+N PE
Sbjct: 70 DANGAQLRAGLEAEGIDCAALETGREA---TGVALIVVDDASQNAIVIVAGSNGEVTPET 126
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ V+ A +V+ Q E P + AAR G VI + P+P E L ID
Sbjct: 127 IARHE-AVLAAADVVICQLETPLATVHAALAAARRLGKTVILNPAPATGPLPAEWLPLID 185
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P S E+ + A G + VLV LG +G +EG P+
Sbjct: 186 YLIPNELEAATLTGLPVGSPEEAATAAAVLRAAGARNVLVTLGPRGVQAALEGAAPVLYD 245
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P +DTT AGDTF FA EG + +RFA AA+L V GA PS+P R
Sbjct: 246 -APKVEAVDTTAAGDTFIGGFAAQLAEGVDVDAAIRFAQRAAALSVTRAGAQPSIPTRAE 304
Query: 370 V 370
+
Sbjct: 305 L 305
>gi|259501617|ref|ZP_05744519.1| ribokinase [Lactobacillus iners DSM 13335]
gi|302191176|ref|ZP_07267430.1| ribokinase [Lactobacillus iners AB-1]
gi|259166902|gb|EEW51397.1| ribokinase [Lactobacillus iners DSM 13335]
Length = 312
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 163/314 (51%), Gaps = 13/314 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + I LPK GETVA AGGKGANQA A+ + T FVG+VG+
Sbjct: 4 VTIIGSINVDNIMHIKALPKPGETVAMSAFSQAAGGKGANQAIASARAGNKTVFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + S + Y+NV K TG A ++LQ GQNSIII G N
Sbjct: 64 DSNGEYMLREFSENEIDTAYINVTKKQ--QTGQAYILLQETGQNSIIIQHGANYDLTEAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ + V+ Q E P + I K A AG I + A IP+ELL D
Sbjct: 122 IMQAKDE-IQTSDFVIAQFETPLAPTILAFKLAHQAGKKTILNPAPAKANIPEELLKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ + + + H++G+ V++ LG KG FV K K
Sbjct: 181 LITPNETESEIITGIRVTDLDSMKRSAEFYHQLGIDGVIITLGEKG--CFVSTSKVSK-- 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+IPA +V +DTT AGDTF + + + + E +A+ ++S VQ GA PS+P
Sbjct: 237 LIPAFKVKAVDTTAAGDTFIGALSSELQADFANIEASAIYASLSSSFAVQKLGAFPSIPK 296
Query: 367 R---KSVLNLLQYA 377
R ++ L + YA
Sbjct: 297 RDIVEAALKEINYA 310
>gi|398909227|ref|ZP_10654437.1| ribokinase [Pseudomonas sp. GM49]
gi|398188412|gb|EJM75715.1| ribokinase [Pseudomonas sp. GM49]
Length = 305
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 161/299 (53%), Gaps = 6/299 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLPK GET+ ++ T++GGKGANQA A+L +G
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPKGGETLIGESFATVSGGKGANQAVAAARLGAQVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ V DG +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDAYGEALRGALLAEQIDCQAVSTV-DGS--SGVALIVVDDNSQNTIVIVPGANGALS 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E D V++ A +++ Q E+PD+ K R G VI + + P+P +
Sbjct: 119 AEAIDRFD-SVIQAADVLICQLEVPDASVGHALKRGRELGKTVILNPAPVSRPLPSDWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS E A + MG +V++ LGA+GS LF +G++
Sbjct: 178 SIDYLIPNESEASALSGLSVDSLETAQAAATRLVAMGAGKVIITLGAQGS-LFADGQR-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ P + +DTT AGDTF FA G+ + +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPVVKAVDTTAAGDTFVGGFAAALAAGQDEVQAIRFGQVAAALSVTRAGAQPSIP 294
>gi|223042460|ref|ZP_03612509.1| ribokinase [Staphylococcus capitis SK14]
gi|417907158|ref|ZP_12550933.1| ribokinase [Staphylococcus capitis VCU116]
gi|222444123|gb|EEE50219.1| ribokinase [Staphylococcus capitis SK14]
gi|341596443|gb|EGS39042.1| ribokinase [Staphylococcus capitis VCU116]
Length = 307
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 167/311 (53%), Gaps = 14/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D + + R PK GET+ +Q GGKGANQA +L T FV +VG
Sbjct: 6 VVIIGSTNVDKLINVTRFPKPGETLHIDQAQREFGGGKGANQAIAAGRLEAETTFVTKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
++ N I + + +Y ++ TG A + + DGQN+I++ GG NM+ +
Sbjct: 66 KEGNADFIIEDFKEASINTEY--ILTADNEETGQAFITVSEDGQNTILVYGGANMTLSAK 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNF 247
+ + + +A V+ Q E+P Q K A++ GV + + A +D +P+ LL
Sbjct: 124 DVMAAE-QPITEADFVVAQLEVPIEAIEQAFKIAKANGVTTVLNPAPAID--LPKSLLAL 180
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
DI+ PNE+E L+G+ + + + E V K+G+ VL+ LG +G+ E E
Sbjct: 181 TDIIIPNETEAELLSGISITNQDNMQETVEYFFKLGISTVLITLGEQGTYYATENES--- 237
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSM 364
+I+PA +V IDTT AGDTF +F + S E+ ++FA A+S+ VQ +GA ++
Sbjct: 238 -NIVPAYKVEAIDTTAAGDTFIGAFVSQLNKDLSNLEQAIQFANQASSITVQRQGAQAAI 296
Query: 365 PDRKSVLNLLQ 375
P R V+N+ +
Sbjct: 297 PTRDEVINVYK 307
>gi|424071779|ref|ZP_17809201.1| ribo kinase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407998421|gb|EKG38834.1| ribo kinase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 306
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 155/303 (51%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A++ +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARMGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL + + VV+ GVPTG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEQIDCQAVTVVE--GVPTGIASIVVDANSQNAIVIVAGGNGRLSPAL 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + IV+ Q E+P AR+ G VI + P+P ID
Sbjct: 123 IERFD-TLLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPANWYALID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE LTG+ DS A G + V++ LG +G+ LF
Sbjct: 182 YLIPNESEAQTLTGVNVDSPAAAENAASAMLTAGARNVIITLGERGT-LFANAS---GME 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA RV +DTT AGDTF FA G + + +RF AAA++ V GA PS+P
Sbjct: 238 HIPARRVQAVDTTAAGDTFVGGFAAALSAGHDQLQAIRFGQAAAAISVTRAGAQPSIPTF 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|395651751|ref|ZP_10439601.1| ribokinase [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 305
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 158/304 (51%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ RLP+ GET+ +T T+ GGKGANQA A+L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRASRLPRAGETLIGQTFTTVPGGKGANQAVASARLGADVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL G+ ++ V+ +G A++++ QN+I+IV G+N
Sbjct: 62 VGTDAYGIQLRDALLVEGIDCRAVSTVEG---SSGVALIVVDDTSQNAIVIVAGSNGELT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D V++ A +++ Q E+P + K R G VI + AP+P E
Sbjct: 119 PASLQAFD-TVLQAANVIVCQLEVPMATVGYALKRGRELGKTVILNPAPASAPLPAEWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE G L+G+ DS + A + + G +V++ LG +G LF +G
Sbjct: 178 SIDYLIPNESEAGALSGVTVDSLDSARLAATRLIQAGAGKVIITLGPQG-VLFSDG-LVF 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + P + +DTT AGDTF FA G+S E +RF AA+L V GA PS+P
Sbjct: 236 EHLVAPKVKAVDTTAAGDTFVGGFAAALANGESEAEAIRFGQVAAALSVTRAGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LHDV 299
>gi|424941177|ref|ZP_18356940.1| ribokinase [Pseudomonas aeruginosa NCMG1179]
gi|346057623|dbj|GAA17506.1| ribokinase [Pseudomonas aeruginosa NCMG1179]
Length = 308
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V++ LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIITLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|299066978|emb|CBJ38173.1| Ribokinase [Ralstonia solanacearum CMR15]
Length = 315
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 151/301 (50%), Gaps = 5/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + LP+ G+TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPCLPRPGQTVAAPALETIPGGKGANQAVAAARLGSRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V G PTG A V + +GQN+I+IV G N P
Sbjct: 75 DPHGMALREGLLREGV--DTAMVTAHAGAPTGIACVTVADNGQNTIVIVAGANRQLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++A +++ Q E P + + G VI + P+P L D
Sbjct: 133 I-DAQRAAFERAKVIVCQLESPPDAVERALLLGQRLGKTVILNPAPAAGPLPTPWLAACD 191
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E LT DS E A H G + V+V LGA+G A +V+ +
Sbjct: 192 YLIPNETEAALLTARRVDSPEAALNAAADLHAQGARHVIVTLGARGVA-YVDATTRLLMP 250
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P A+ IDTT AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 251 AHP-AQAIDTTAAGDTFVGALATALAEGAAPVEAIQFGLAAAAVSVTRLGAQPSIPFRSE 309
Query: 370 V 370
+
Sbjct: 310 L 310
>gi|218892092|ref|YP_002440959.1| ribokinase [Pseudomonas aeruginosa LESB58]
gi|218772318|emb|CAW28100.1| ribokinase [Pseudomonas aeruginosa LESB58]
Length = 308
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 158/303 (52%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFITVPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGGNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V++ LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIITLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P ARV +DTT AGDTF FA G +RF AAA++ V GA S+P R
Sbjct: 238 HFPVARVKALDTTAAGDTFVGGFAAALARGLDEAAAIRFGQAAAAISVTRLGAQTSIPSR 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|366052882|ref|ZP_09450604.1| ribokinase family sugar kinase [Lactobacillus suebicus KCTC 3549]
Length = 305
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 162/305 (53%), Gaps = 11/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D V I +PK GET++++ + AGGKGANQA + F+G+VG+
Sbjct: 5 VTVLGSLNVDTTVTIKAMPKPGETISSENKSSAAGGKGANQAIAAVRAGAQVGFIGRVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + + L V D NV D + TG A+++L +GQNSII+ GG+N +
Sbjct: 65 DEQGKYMIECLQEDSV--DTANVSTDPLIGTGSAIILLDDNGQNSIIVYGGSNQKVTTNE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ ++ ++ Q E P + K A+ GV I + IP ELL + D
Sbjct: 123 IDDAHDQII-QSDFIVSQFETPQEATLAAFKFAKEHGVKTILNPAPAAEIIP-ELLKYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E LTG+ E + + KMGV+ +++ +G+KG A + +
Sbjct: 181 IIIPNETESASLTGIEVTDEESMIDNFTAFKKMGVKNLIITVGSKG-AFYANDQ---GHE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
IPA +V +DTT AGDTF + + E + E + FA A+S+ VQ GA+PS+P
Sbjct: 237 FIPAFKVKAVDTTAAGDTFIGALSSQLNAELSNMTEAITFAQRASSITVQGLGAMPSIPK 296
Query: 367 RKSVL 371
++
Sbjct: 297 LDQII 301
>gi|357009572|ref|ZP_09074571.1| ribokinase [Paenibacillus elgii B69]
Length = 304
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 164/309 (53%), Gaps = 13/309 (4%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VV+GS N DI +E DR P+ GET+ + L GGKGANQA A+L +G V
Sbjct: 4 PKIVVIGSLNMDIVIEADRYPQQGETMLGHGIRFLPGGKGANQAVAAARLGAAVTMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G+ + AL V D + V + TG A + + G NSI+++ G N + P
Sbjct: 64 GADGFGQELLQALQAENVGTDGVRVAEQ--AATGVASIYV-CQGDNSIVVLPGANHTLLP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQEL 244
D EV+ A IVLLQ EIP A+ A++ G V+ + AP +P+EL
Sbjct: 121 ADI-DACREVIATADIVLLQMEIPVDTVAHAARLAKACGRTVVLNP----APAQKLPEEL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L +D ++PN +EL LTG + E + A+ + MG + V+ LGA+GSA F+E E
Sbjct: 176 LRNVDYITPNRTELALLTGRSAEGGE-LEAAMRELAGMGARHVITTLGAEGSA-FMEQEG 233
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ + V+DTTGAGD+F A A G+S EE + F A ++L V GA P M
Sbjct: 234 TLTRVPGYVMEVVDTTGAGDSFNAGLAYSLALGQSLEEAVSFGAKVSALAVTKFGAQPGM 293
Query: 365 PDRKSVLNL 373
P + VL+
Sbjct: 294 PTLQEVLDF 302
>gi|418031186|ref|ZP_12669671.1| ribokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351472245|gb|EHA32358.1| ribokinase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 282
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 156/299 (52%), Gaps = 20/299 (6%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+D G I
Sbjct: 1 MDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAIL 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L GVR DYM V T H V+ ++G NSI++V G N P + LE
Sbjct: 61 NNLKANGVRTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-AYALNALEQ 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++K +VL+Q+EIP+ +V K S +P++ + P+ QE ++ L+PNE E
Sbjct: 117 IEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIMLNPAPAR-PLKQETIDHATYLTPNEHE 175
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV- 316
L T ISEA+ + ++ + G +G V K+ +IP+ V
Sbjct: 176 ASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEVLIPSFPVE 222
Query: 317 -IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
+DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R V LL
Sbjct: 223 PVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNKVEELL 281
>gi|398308541|ref|ZP_10512015.1| ribokinase [Bacillus mojavensis RO-H-1]
Length = 293
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 160/307 (52%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V D+ P GETV + QT+ GGKGANQA A+L + +G+VG+
Sbjct: 4 ICVIGSCSMDLVVSSDKRPNAGETVLGTSFQTVPGGKGANQAVAAARLGANVFMIGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I + L GV DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DHYGTAIMNNLKANGVHTDYMEPVTHKESGTAHIVL---AEGDNSIVVVKGANDEITP-S 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + LE ++ +VL+Q+EIP+ +V + S +P++ + P+ QE ++
Sbjct: 120 YAIDALEKLENIDMVLIQQEIPEETVDEVCRYCHSHDIPIMLNPAPA-RPLKQETIDHAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L T +SEA+ + ++ + G +G V K+
Sbjct: 179 YLTPNEHEAAILFPELT-----VSEALA----LYPAKLFITEGKQG----VRYSSGSKER 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IIP+ V +DTTGAGDTF A+ AV EGK E LRFA AASL V GA MP R
Sbjct: 226 IIPSFPVEPVDTTGAGDTFNAALAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPSR 285
Query: 368 KSVLNLL 374
K V LL
Sbjct: 286 KEVEELL 292
>gi|344174170|emb|CCA85952.1| ribokinase [Ralstonia syzygii R24]
Length = 315
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 157/307 (51%), Gaps = 7/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + RLP G+TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPRLPYPGQTVAAPALETIPGGKGANQAVAAARLGGRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V G PTG A V + GQN+I+IV G N P
Sbjct: 75 DPHGTALREGLRREGV--DTAMVTAHAGAPTGIACVTVADSGQNTIVIVAGANRQLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ ++A +++ Q E P D+V + R G VI + P+P L
Sbjct: 133 INAQQ-AAFERAKVIVCQLESPLDAVERALLLGQR-LGKTVILNPAPAAGPLPTPWLAAC 190
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE+E LT P DS E A H G + V++ LGA+G A +V+ +
Sbjct: 191 DYLIPNETEAALLTARPVDSPEAALAAADDLHAQGARHVIITLGARGIA-YVDATTRLLM 249
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P A+ IDTT AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 250 PAHP-AQAIDTTAAGDTFVGALATALAEGAAPAEAIQFGQAAAAVSVTRLGAQPSIPFRS 308
Query: 369 SVLNLLQ 375
+ + +Q
Sbjct: 309 ELASPVQ 315
>gi|386334017|ref|YP_006030188.1| ribokinase [Ralstonia solanacearum Po82]
gi|334196467|gb|AEG69652.1| ribokinase [Ralstonia solanacearum Po82]
Length = 315
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 155/306 (50%), Gaps = 5/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + LP+ G+TV+A +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPCLPQPGQTVSAPALETIPGGKGANQAVAAARLGSRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV + V G PTG A V + GQN+I+IV G N P
Sbjct: 75 DPHGTALREGLRREGV--ETAMVTAHAGAPTGIACVTVADSGQNTIVIVAGANRLLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++A +++ Q E P + + + G VI + P+P L D
Sbjct: 133 I-DAQQAAFERAKVIVCQLESPPDAVERALRLGQRLGKTVILNPAPAAGPLPTPWLAACD 191
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E LT P DS E +A H G + V++ LGA+G A +V+ +
Sbjct: 192 YLIPNETEAALLTARPVDSPEAALDAAADLHAQGARHVIITLGARGIA-YVDATSRLLMP 250
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P AR ID T AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 251 AYP-ARAIDATAAGDTFVGALATALAEGAAPAEAIQFGQAAAAVSVTRLGAQPSIPFRSE 309
Query: 370 VLNLLQ 375
+ + +Q
Sbjct: 310 LASPMQ 315
>gi|302337864|ref|YP_003803070.1| PfkB domain-containing protein [Spirochaeta smaragdinae DSM 11293]
gi|301635049|gb|ADK80476.1| PfkB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 334
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 167/321 (52%), Gaps = 21/321 (6%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
PP ++VVGS D+ V + P GETV K+ T GGKGANQA A+L +G+
Sbjct: 4 PPRILVVGSFVMDLIVTTEVFPGSGETVLGKSFATAPGGKGANQAVQAARLGADVTMIGK 63
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ---NSIIIVGGTNM 183
VG+D G+ + + G+ Y+ V K G V++ + G+ N II+V G NM
Sbjct: 64 VGDDEFGRTLVHSCEKAGINTQYVTVAKKTASAVGD-VLLEEVAGKGTTNRIIVVSGANM 122
Query: 184 SCWPEKFGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP 239
S G ED+ E+V + +V+LQ EIP +N V + A S GVPV+ ++ A
Sbjct: 123 S-----IGAEDISFVKEIVDQYAMVMLQLEIPMEINELVVEYASSKGVPVMLNSAPASA- 176
Query: 240 IPQELLNFIDILSPNESELGRLTGMPTDSYEQ------ISEAVVKCHKMGVQQVLVKLGA 293
+ +LL + +SPNE E+ LTG+P ++ + A K GV+ VLV LG
Sbjct: 177 LSDDLLAGLSYISPNEHEIQALTGIPIRKEDKRVNRDDLRAAAEVLLKKGVKNVLVTLGN 236
Query: 294 KGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASL 353
GSAL E + Q I V D T AGD+F A+F G G + E+ L FA+ A+L
Sbjct: 237 GGSALINRNEFLV-QPCIDVVDVKDPTAAGDSFVAAFVSGLGTGMNHEQALLFASYTAAL 295
Query: 354 CVQVKGAIPSMPDRKSVLNLL 374
V GA PS+P +V +L+
Sbjct: 296 TVSRPGAQPSLPYLSAVTDLM 316
>gi|449096046|ref|YP_007428537.1| ribokinase [Bacillus subtilis XF-1]
gi|449029961|gb|AGE65200.1| ribokinase [Bacillus subtilis XF-1]
Length = 282
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 156/299 (52%), Gaps = 20/299 (6%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+D G I
Sbjct: 1 MDLVVISDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAIL 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L GVR DYM V T H V+ ++G NSI++V G N P + LE
Sbjct: 61 NNLKANGVRTDYMEPVTHAESGTAHIVL---AEGDNSIVVVKGANDDITP-AYALNALEQ 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++K +VL+Q+EIP+ +V K S +P++ + P+ QE ++ L+PNE E
Sbjct: 117 IEKVDMVLIQQEIPEETVDEVCKYCHSHDIPIMLNPAPAR-PLKQETIDHATYLTPNEHE 175
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV- 316
L T ISEA+ + ++ + G +G V K+ +IP+ V
Sbjct: 176 ASILFPELT-----ISEALA----LYPAKLFITEGKQG----VRYSAGSKEVLIPSFPVE 222
Query: 317 -IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
+DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R V LL
Sbjct: 223 PVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNEVEELL 281
>gi|373495607|ref|ZP_09586163.1| ribokinase [Fusobacterium sp. 12_1B]
gi|371967643|gb|EHO85112.1| ribokinase [Fusobacterium sp. 12_1B]
Length = 307
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 171/308 (55%), Gaps = 16/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ +R PK GET+ K + GGKGANQA KL +G++G
Sbjct: 4 VVVAGSINMDLVTICERAPKGGETLFGKEFFQVPGGKGANQAVAIGKLGTQVTMLGKIGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +++ GV Y ++ TG A ++++ +GQN I++V G NM
Sbjct: 64 DSFGKDLISSMNNSGVDTKY---IETSASSTGIAKIIVEENGQNRILVVSGANMDV-DRA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D ++++ +A I++ Q EIP D+V + KA + AG I + AP+ E++
Sbjct: 120 YIDRHMDIINEADILVTQLEIPMDTVEYALKKA-KEAGKTTILNPAPA-APLNDEIIRNS 177
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNESELG +TGMPT++ E+I A K MGV++++V LG++GS + K
Sbjct: 178 DIIIPNESELGIITGMPTNTLEEIEAAARKLLNMGVKELIVTLGSQGSLHLNK-----KG 232
Query: 309 SIIPAA---RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
S++ A + +DTT AGD+F V ++ + +E + FA +++ V KGA S+P
Sbjct: 233 SVMHTAYKVKAVDTTAAGDSFIGGL-VRNIQADNLDEAIEFATKVSAITVTRKGAQISIP 291
Query: 366 DRKSVLNL 373
+ V N
Sbjct: 292 TIEEVENF 299
>gi|377810123|ref|YP_005005344.1| ribokinase [Pediococcus claussenii ATCC BAA-344]
gi|361056864|gb|AEV95668.1| ribokinase [Pediococcus claussenii ATCC BAA-344]
Length = 302
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 163/307 (53%), Gaps = 15/307 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ + ++R+P+ GET+A + AGGKGANQA A+ F+G+VG+
Sbjct: 5 IAVLGSLNVDMILRLNRMPQPGETLAVSNKSSAAGGKGANQAVASARSGAAVRFIGRVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + D+L ++D +N+ D V TG AV++L GQN I++ GG N PE
Sbjct: 65 DDEGRFMIDSLKED--QIDTVNIKTDKRVGTGSAVILLDDSGQNDILVYGGANQRIAPED 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ +V ++ Q E P V ++ + A++ G+ + + AP I +LL
Sbjct: 123 ISE---DVFNGIEALIAQFETPQDVTLKAFQIAKTKGILTVLNP----APAQKINPDLLK 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D++ PNE+E LTG+ E + + MGV+ +++ +G+KG+ + E
Sbjct: 176 VTDLVIPNETESAALTGIEVIDEESMEKTAESFRGMGVKNLIITIGSKGAFYSTDNESGF 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
++ + +DTT AGDTF + S ++ L + A+SL VQ GA+PS+P
Sbjct: 236 MKAF--KVKAVDTTAAGDTFIGALTSQLNNDLSNIKDALEYGQRASSLTVQKLGAMPSIP 293
Query: 366 DRKSVLN 372
R+ VL+
Sbjct: 294 TREEVLS 300
>gi|417645067|ref|ZP_12295001.1| ribokinase [Staphylococcus warneri VCU121]
gi|445058444|ref|YP_007383848.1| ribokinase [Staphylococcus warneri SG1]
gi|330684123|gb|EGG95872.1| ribokinase [Staphylococcus epidermidis VCU121]
gi|443424501|gb|AGC89404.1| ribokinase [Staphylococcus warneri SG1]
Length = 303
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 18/303 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R K GET+ + +Q + GGKGANQA A++ T F+ +VG
Sbjct: 5 VVILGSTNVDQFLTVERYAKPGETLHVEEAQKSYGGGKGANQAIATARMKADTTFISKVG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D + + + G+ +DY +++ TG A + + + GQN+I + GG NM+ P+
Sbjct: 65 NDGLAQFMFEDFKAAGMNIDY--ILESETEKTGQAFITVDAQGQNTIYVYGGANMAMTPD 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
+V A ++ Q E+P I+ K AR+AGV + + AP IPQELL
Sbjct: 123 DVKSAKAAIVD-ADFIVAQLEVPVPAIIEAFKVARAAGVTTVLNP----APAKEIPQELL 177
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
ID++ PNE E L+G+P + +++ +G + V++ LG +G+ VE +
Sbjct: 178 ELIDVIVPNEFEAEILSGVPVTDEKSMAQNADYFLSLGAKVVIITLGEQGTYYAVENDS- 236
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIP 362
++PA +V IDTT AGDTF +F F ++ ++ E + FA AASL VQ GA
Sbjct: 237 ---GLVPAQKVKAIDTTAAGDTFIGAFVSRFNMKERNLVEAIDFANKAASLTVQKSGAQA 293
Query: 363 SMP 365
S+P
Sbjct: 294 SIP 296
>gi|349611576|ref|ZP_08890809.1| ribokinase [Lactobacillus sp. 7_1_47FAA]
gi|348608423|gb|EGY58405.1| ribokinase [Lactobacillus sp. 7_1_47FAA]
Length = 312
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 162/314 (51%), Gaps = 13/314 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + I LPK GETVA AGGKGANQA A+ + T FVG+VG+
Sbjct: 4 VTIIGSINVDNIMHIKALPKPGETVAMSAFSQAAGGKGANQAIASARAGNKTVFVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + S + Y+NV K TG A ++LQ GQNSIII G N
Sbjct: 64 DSNGEYMLREFSENEIDTAYINVTKKQ--QTGQAYILLQETGQNSIIIQHGANYDLTEAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ + V+ Q E P + I K A AG I + A IP+ELL D
Sbjct: 122 IMQAKDE-IQTSDFVIAQFETPLAPTILAFKLAHQAGKKTILNPAPAKANIPEELLKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ + + H++G+ V++ LG KG FV K K
Sbjct: 181 LITPNETESEIITGIRVTDLNSMKRSAEFYHQLGIGGVIITLGEKG--CFVSTSKVSK-- 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+IPA +V +DTT AGDTF + + + + E +A+ ++S VQ GA PS+P
Sbjct: 237 LIPAFKVKAVDTTAAGDTFIGALSSELQADFANIEASAIYASLSSSFAVQKLGAFPSIPK 296
Query: 367 R---KSVLNLLQYA 377
R ++ L + YA
Sbjct: 297 RDIVEAALKEINYA 310
>gi|374851301|dbj|BAL54265.1| ribokinase [uncultured planctomycete]
Length = 311
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 169/311 (54%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYFVGQVG 128
++V+GS N D+ V++ RLP+ GETV T GGKGANQA A+ P + VG
Sbjct: 5 VIVLGSVNTDLVVKVRRLPRPGETVIGGTFYQNQGGKGANQAVAAARSGEKPVTLIAAVG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G+ AL + L ++ V KDG V +G A++M+ DG+N+I + G N + P
Sbjct: 65 HDVFGRESLVALQRDKIDLTHVKV-KDG-VSSGVALIMVDEDGENAIAVASGANTALSPA 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ V + A ++L EIP ++V + +A R GV I + + +P +L +
Sbjct: 123 DVNEVPDSVFESAAVLLTCFEIPVETVRAGICRA-RQFGVTTILNPAPVPEELPADLFSD 181
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVK-CHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE E+ RL +P E + K GV+ V++ LGA+G F G +
Sbjct: 182 VDIMTPNEHEIARLLDLPQIEDEAGARTAAKRLLDRGVRNVILTLGARGC--FFAGAE-- 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+PA +V +DTTGAGD F + A EG+ E+ LR+A+AAA++ V GA PSM
Sbjct: 238 GTGFLPAFQVKAVDTTGAGDAFNGALAAAISEGRDWEDSLRWASAAAAISVTRAGAQPSM 297
Query: 365 PDRKSVLNLLQ 375
P RK + + L+
Sbjct: 298 PFRKEIEDFLK 308
>gi|421730007|ref|ZP_16169136.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075973|gb|EKE48957.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 293
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 155/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V +R PK GETV QT+ GGKGANQA ++L Y VG+ G
Sbjct: 4 ICVIGSCSMDLVVTSERRPKAGETVLGTDFQTVPGGKGANQAVAASRLGANVYMVGKAGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV DYM V T H V+ ++G NSI++V G N P
Sbjct: 64 DSYGKAIIENLKANGVNTDYMETVTHKKSGTAHIVL---AEGDNSIVVVKGANDDISP-N 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ LE + IVL+Q+EIP+ +V R+ +PVI + P+ Q +
Sbjct: 120 YAKSALEKLPSIDIVLIQQEIPEETVEEVCSYCRAQQIPVILNPAPAR-PLKQSTIENAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++P A +DTTGAGDTF A+ AV EG+ E+ L FA AASL VQ GA
Sbjct: 220 DGTAERLVPGFPAEAVDTTGAGDTFNAALAVALAEGRDIEQALLFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPARKEVEELL 292
>gi|395239732|ref|ZP_10417507.1| Ribokinase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394476125|emb|CCI87484.1| Ribokinase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 305
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 162/318 (50%), Gaps = 28/318 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS+N D + + PK GET+ A GGKGANQA K YF+ +VG+
Sbjct: 4 IIVIGSSNVDTTLHVKDFPKPGETINANKVTVAGGGKGANQAIAATKSGADCYFISRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ + L GV+ DY V K TG A + L GQN III G N P
Sbjct: 64 DSFADFLLAQLQKYGVKTDY--VQKTANTATGQAYITLNEAGQNDIIIDHGANYELKP-- 119
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
ED+E ++ A ++ Q E P + + K A++ GV I + IP+ELL
Sbjct: 120 ---EDIERAEGLIADAECIIAQFETPLASTLYAFKLAKANGVMTILNPAPAIEKIPRELL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D+++PNE+E +TG+ +S +++ K H++GV+ V++ G KG+ + P
Sbjct: 177 EVTDVITPNETESALITGIKIESEADLAKNAAKLHELGVENVIITYGDKGAYIAT----P 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGK------SREECLRFAAAAASLCVQV 357
+ ++PA +V +DTT AGDTF +GF+ G + E+ A+ A+SL VQ
Sbjct: 233 KVEKLVPAFKVKAVDTTAAGDTF-----LGFLAGSLDTDLANIEKAATIASKASSLAVQK 287
Query: 358 KGAIPSMPDRKSVLNLLQ 375
GA PS+P V L+
Sbjct: 288 LGAQPSIPSIAEVEEALR 305
>gi|254502585|ref|ZP_05114736.1| kinase, pfkB family [Labrenzia alexandrii DFL-11]
gi|222438656|gb|EEE45335.1| kinase, pfkB family [Labrenzia alexandrii DFL-11]
Length = 308
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 153/307 (49%), Gaps = 15/307 (4%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
P+ VVGS N D++ +DR PK+GETV + + GGKGANQA KL +G VG
Sbjct: 3 PVTVVGSINIDLFSYLDRWPKIGETVMVRETANTLGGKGANQAVAATKLRANATMIGAVG 62
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
ED G++ D L+ V D + +D G TG A + + +G N I + G N PE
Sbjct: 63 EDGFGRVAADQLAAFNVTADLIE-KRDCG--TGMAFIDVGPEGDNIIRLASGANGQMQPE 119
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP-----QE 243
G + + ++G+VLLQ EI +++ A+ AR G VI D AP P ++
Sbjct: 120 DLGPHSNQ-LNQSGVVLLQNEINLETSLKAAELARGGGALVIMDP----APAPHPAWTKD 174
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
++ D+L+PN SE G + G ++ E+ + G+ ++ LG KG A E
Sbjct: 175 VIAAFDVLTPNASEAGAILGATPETLEEARDGARHLRTFGLSGAIITLGEKGVAWSFGDE 234
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
++ + P+ IDT AGD F + A EG +RFA AA+L KGA S
Sbjct: 235 DGVEPA--PSVTAIDTVAAGDCFNGALATALSEGALMRSAIRFAMHAAALATTRKGASAS 292
Query: 364 MPDRKSV 370
+P R V
Sbjct: 293 LPTRDEV 299
>gi|191637144|ref|YP_001986310.1| ribokinase [Lactobacillus casei BL23]
gi|385818852|ref|YP_005855239.1| Ribokinase [Lactobacillus casei LC2W]
gi|385822025|ref|YP_005858367.1| Ribokinase [Lactobacillus casei BD-II]
gi|409995995|ref|YP_006750396.1| ribokinase [Lactobacillus casei W56]
gi|418009840|ref|ZP_12649627.1| ribokinase [Lactobacillus casei Lc-10]
gi|190711446|emb|CAQ65452.1| Ribokinase [Lactobacillus casei BL23]
gi|327381179|gb|AEA52655.1| Ribokinase [Lactobacillus casei LC2W]
gi|327384352|gb|AEA55826.1| Ribokinase [Lactobacillus casei BD-II]
gi|406357007|emb|CCK21277.1| Ribokinase [Lactobacillus casei W56]
gi|410554967|gb|EKQ28932.1| ribokinase [Lactobacillus casei Lc-10]
Length = 309
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 164/302 (54%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ T AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDSILHIQRLPQPGETIKMDTFSQAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L ++D V G TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGEL--VKNQIDTQYVATTVGTQTGQAYILLQASGQNSIIIQHGANFEVT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P ++++ A V+ + E P + K A++AG I + +P LL
Sbjct: 120 PADV-QRAADLIQSADFVVAEFETPVDATAEAFKIAKAAGKMTILNPAPAQKDLPAALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + + H++G++ V++ LG+KGS + ++GE
Sbjct: 179 NVDLIAPNETESELITGIPVVDEDSMRASAAYYHELGIRGVIITLGSKGSFISLDGEA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+I+PA +V +DTT AGDTF + A V + K+ +A+ A+S VQ GA PS
Sbjct: 237 --TIVPAFKVKAVDTTAAGDTFIGALASVLQTDLKNIVTAASYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|440743822|ref|ZP_20923130.1| carbohydrate kinase PfkB [Pseudomonas syringae BRIP39023]
gi|440374888|gb|ELQ11603.1| carbohydrate kinase PfkB [Pseudomonas syringae BRIP39023]
Length = 306
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 154/303 (50%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL + + VV+ GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEHIDCQAVTVVE--GVSTGIASIVVDANSQNAIVIVAGGNGRLSPAL 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + IV+ Q E+P AR+ G VI + P+P ID
Sbjct: 123 IERFD-ALLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPANWYALID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE LTG+ DS A GV+ V++ LG +G+ LF
Sbjct: 182 YLIPNESEAQTLTGVSVDSPAAAENAASAMLAAGVRNVIITLGERGT-LFANASGVEH-- 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA RV +DTT AGDTF FA G + +RF AAA++ V GA PS+P
Sbjct: 239 -IPARRVQAVDTTAAGDTFVGGFAAALSAGHGELQAIRFGQAAAAISVTRAGAQPSIPTF 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|427442752|ref|ZP_18925724.1| ribokinase [Pediococcus lolii NGRI 0510Q]
gi|425786625|dbj|GAC46512.1| ribokinase [Pediococcus lolii NGRI 0510Q]
Length = 303
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 161/305 (52%), Gaps = 10/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++DR+P+ GET+A GGKGANQA A+ T F+G+VG
Sbjct: 5 VVVLGSLNVDRILQMDRVPEPGETLALNNQDMAGGGKGANQAIAAARSGAQTSFIGRVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK + L GV D + V +D G TG A VM++ G+N I+I GG N
Sbjct: 65 DENGKFMLQQLVNSGVTTDLVAVDEDAG--TGQAFVMVEKSGENRILIYGGANAQLSAAD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P + A+ GV I + A +P ELL D
Sbjct: 123 V-KKAQAQIAAADLMVAQLETPVETTQFAFQMAKELGVKTILNPAPAVAKLPAELLKNTD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E+ LTG+ + +A + H +GV V++ LG+KG + +G +
Sbjct: 182 VITPNETEVEILTGIAVTDEAAMLKAAQRLHDLGVATVIITLGSKG-VFYDDGA---QHG 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S + + + A+SL VQ GA PS+P
Sbjct: 238 IVPAFKVQAVDTTAAGDTFLGALSSELNPDLSNLKTAIEYGNKASSLAVQKMGAQPSIPT 297
Query: 367 RKSVL 371
RK +L
Sbjct: 298 RKDIL 302
>gi|422617705|ref|ZP_16686406.1| carbohydrate kinase, PfkB [Pseudomonas syringae pv. japonica str.
M301072]
gi|440721807|ref|ZP_20902199.1| carbohydrate kinase PfkB [Pseudomonas syringae BRIP34876]
gi|440724852|ref|ZP_20905127.1| carbohydrate kinase PfkB [Pseudomonas syringae BRIP34881]
gi|443644319|ref|ZP_21128169.1| Ribokinase [Pseudomonas syringae pv. syringae B64]
gi|330898086|gb|EGH29505.1| carbohydrate kinase, PfkB [Pseudomonas syringae pv. japonica str.
M301072]
gi|440362606|gb|ELP99792.1| carbohydrate kinase PfkB [Pseudomonas syringae BRIP34876]
gi|440369431|gb|ELQ06408.1| carbohydrate kinase PfkB [Pseudomonas syringae BRIP34881]
gi|443284336|gb|ELS43341.1| Ribokinase [Pseudomonas syringae pv. syringae B64]
Length = 306
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 154/306 (50%), Gaps = 15/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL + + VV+ GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEQIDCQAVTVVE--GVSTGIASIVVDANSQNAIVIVAGGNGRLSPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F ++ + IV+ Q E+P AR+ G VI + P+P
Sbjct: 123 IERFDT----LLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPANWYA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS A G + V++ LG G+ LF
Sbjct: 179 LIDYLIPNESEAQTLTGVSVDSPAAAENAASSMLAAGARNVIITLGEHGT-LFANAS--- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA RV +DTT AGDTF FA G + +RF AAA++ V GA PS+
Sbjct: 235 GMEHIPARRVQAVDTTAAGDTFVGGFAAALSAGHGELQAIRFGQAAAAISVTRAGAQPSI 294
Query: 365 PDRKSV 370
P + V
Sbjct: 295 PTFEEV 300
>gi|219871756|ref|YP_002476131.1| ribokinase [Haemophilus parasuis SH0165]
gi|219691960|gb|ACL33183.1| ribokinase [Haemophilus parasuis SH0165]
Length = 307
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 174/310 (56%), Gaps = 10/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + PK GET+ Q GGKGANQA A+ +F+G +G+
Sbjct: 5 LCVLGSINVDHVIRVPYFPKAGETLTGYGYQIAYGGKGANQAVAAARCGANVHFIGAIGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + A G+ + ++V+++ TG A++ + G+NSI+I G N E
Sbjct: 65 DQIGKTMKQAFEQDGINTEAISVIENQ--STGLAMIQVADLGENSIVISAGANAD-LSEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++A I+L+Q E P + AK A+ AGV V+ + P+P LL+ ID
Sbjct: 122 LVEQHKSHIEQADILLMQLESPLQAVAKAAKIAKKAGVKVVLNPAPAQ-PLPDSLLSQID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ + + + A H++G++ VL+ LG+KG LF EK +
Sbjct: 181 IITPNETEAEILTGIKVTNEQTAAVAANHFHQLGIETVLITLGSKG--LFYS-EKG-QGE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IIP V +DTT AGDTF +F +EGKS +E +RFA AAA++ V GA ++P R
Sbjct: 237 IIPGFLVDAVDTTAAGDTFNGAFVTALLEGKSPKESIRFAHAAAAISVTRMGAQTAIPRR 296
Query: 368 KSVLNLLQYA 377
+ + LL ++
Sbjct: 297 EEIEALLLFS 306
>gi|419838890|ref|ZP_14362310.1| ribokinase [Haemophilus haemolyticus HK386]
gi|386910118|gb|EIJ74780.1| ribokinase [Haemophilus haemolyticus HK386]
Length = 306
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 160/310 (51%), Gaps = 12/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L+V+GS N D + + K GET+ Q + GGKGANQA A+L F+G VG
Sbjct: 5 LIVLGSINADHVISVPYFSKPGETLTGDNYQLVYGGKGANQAVAAARLGANVEFIGCVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +A S G+ D N+ TG A + + G+NSI++ G N + EK
Sbjct: 65 DVIGETMKNAFSQEGI--DTTNIHSISQEMTGMAFIQVAQSGENSIVLARGAN-AHLDEK 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
+ ++ +L+Q E P S AK A+ GV V+ + A D + LL+ I
Sbjct: 122 LVRHSEAKIAQSNYLLMQLETPISGVELAAKIAQENGVKVVLNPAPARD--LSDTLLSMI 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI++PNE+E LTG+ + EA HK G+ V++ LG KG + GE
Sbjct: 180 DIITPNETEAEILTGVRVSDEQSALEAAQVFHKKGIDCVMITLGEKGVFVSQNGET---- 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
II RV +DTT AGDTF F +EG+S E+ +RF AAA++ V KGA PS+P
Sbjct: 236 RIINGFRVKAVDTTAAGDTFNGGFVTALLEGQSFEKAVRFGQAAAAISVTRKGAQPSIPT 295
Query: 367 RKSVLNLLQY 376
R+ L L +
Sbjct: 296 RQETLEFLAH 305
>gi|424780763|ref|ZP_18207633.1| Ribokinase [Catellicoccus marimammalium M35/04/3]
gi|422842688|gb|EKU27137.1| Ribokinase [Catellicoccus marimammalium M35/04/3]
Length = 302
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 165/304 (54%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D V R+P+ GET+ + GGKGANQA +L T+F+G VG
Sbjct: 4 VTVVGSINLDHMVRTPRMPQGGETIHVHEVFSAGGGKGANQAVAIQRLGSETHFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK++ + L G+ L + +++D TG A V++ +N I++ GG NM+ PE
Sbjct: 64 DDEGKMMLELLGEEGMDLSAIRILED--TVTGQAFVIVDDASENRILVYGGANMALTPEH 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+E +++ + V+ Q E+ + + + AR+AGV + + +P +LL+ D
Sbjct: 122 I-EESASLIESSQFVVSQFEVDLACIEKAFRIARNAGVKTVLNPAPAKKEVPSQLLDLTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E LTG+ ++ + H GV+ V++ LG++G A F E K+
Sbjct: 181 IVIPNETEAELLTGIKVETEADMRACAEAFHNHGVETVIITLGSRG-AYFHTKE---KEG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V DTT AGDTF +F + + EE ++F A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAKDTTAAGDTFIGAFMSCLQPDASNLEEAIQFGNRASSIAVQRYGAQPSIPF 296
Query: 367 RKSV 370
++ +
Sbjct: 297 KEEL 300
>gi|296186861|ref|ZP_06855262.1| ribokinase [Clostridium carboxidivorans P7]
gi|296048575|gb|EFG88008.1| ribokinase [Clostridium carboxidivorans P7]
Length = 310
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 162/303 (53%), Gaps = 19/303 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
++GS N D+ + +DR+ K GET+ +K Q + GGKGANQA +L + VG+D
Sbjct: 6 ILGSINMDLVLRVDRMVKSGETILSKGFQKIPGGKGANQAVAAKRLGANVCMLASVGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG + +AL + D N+ PTG A++ + G NSII+V G NM +
Sbjct: 66 NGFSLVEALKKDNI--DVSNISYSDINPTGMAIITVDDLGNNSIIVVPGANMEIDTKYI- 122
Query: 192 DEDLE-VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFID 249
E LE V+K + I++ Q E P IQ + A+ GV + + A D IP+ELL D
Sbjct: 123 -EGLEKVIKNSKILVAQFETPIEATIQAFRIAKENGVLTVLNPAPAKD--IPEELLKITD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LT + E I +A K + GV+ V++ LG KG+A+ + + S
Sbjct: 180 IIAPNETEAFELTNIEVKDEESIRKASNKFLEKGVKFVIITLGEKGAAILDKD----RLS 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEG-----KSREECLRFAAAAASLCVQVKGAIP 362
I+PA +V IDTT AGD+F + V S E ++FA +S+ VQ GA P
Sbjct: 236 IVPAYKVKAIDTTAAGDSFIGALTSKLVNSDVIDFNSIENSIKFANKVSSIVVQKSGAQP 295
Query: 363 SMP 365
S+P
Sbjct: 296 SLP 298
>gi|417839414|ref|ZP_12485598.1| ribokinase [Haemophilus haemolyticus M19107]
gi|341953121|gb|EGT79634.1| ribokinase [Haemophilus haemolyticus M19107]
Length = 306
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 158/310 (50%), Gaps = 12/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ Q + GGKGANQA A+L F+G VG
Sbjct: 5 LTVLGSINADHVISVPYFSKPGETLTGDNYQLVYGGKGANQAVAAARLGANVEFIGCVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +A S R+D N+ TG A + + G+NSI++ G N + EK
Sbjct: 65 DVIGETMKNAFSQE--RIDTTNIHSISQEMTGMAFIQVAQSGENSIVLARGAN-AHLDEK 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
+ ++ +L+Q E P S AK A+ GV V+ + A D + LL+ I
Sbjct: 122 LVQHSEAKIAQSNYLLMQLETPISGVELAAKIAQENGVKVVLNPAPARD--LSDTLLSMI 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI++PNE+E LTG+ + EA HK G+ V++ LG KG + GE
Sbjct: 180 DIITPNETEAEILTGVRVSDEQSAVEAAQVFHKKGIDCVMITLGEKGVFVSQNGET---- 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
II RV +DTT AGDTF F +EG+S E +RF AAA++ V KGA PS+P
Sbjct: 236 RIINGFRVKAVDTTAAGDTFNGGFVTALLEGQSFENAVRFGQAAAAISVTRKGAQPSIPT 295
Query: 367 RKSVLNLLQY 376
R+ L L +
Sbjct: 296 RQETLEFLTH 305
>gi|424066868|ref|ZP_17804329.1| ribo kinase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408001796|gb|EKG42075.1| ribo kinase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 306
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL + + VV+ GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEQIDCQAVTVVE--GVSTGIASIVVDANSQNAIVIVAGGNGRLSPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F ++ + IV+ Q E+P AR+ G VI + P+P
Sbjct: 123 IERFDT----LLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPANWYA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS A G + V++ LG +G+ LF
Sbjct: 179 LIDYLIPNESEAQTLTGVNVDSPAAAENAASAMLTAGARNVIITLGERGT-LFANAS--- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA RV +DTT AGDTF FA G + + +RF AAA++ V GA PS+
Sbjct: 235 GMEHIPARRVQAVDTTAAGDTFVGGFAAALSAGHDQLQAIRFGQAAAAISVTRAGAQPSI 294
Query: 365 PDRKSV 370
P + V
Sbjct: 295 PTFEEV 300
>gi|384267128|ref|YP_005422835.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|380500481|emb|CCG51519.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
Length = 293
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 155/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V DR PK GETV QT+ GGKGANQA ++L Y VG+ G
Sbjct: 4 ICVIGSCSMDLVVTSDRRPKAGETVLGTDFQTVPGGKGANQAVAASRLGANVYMVGKAGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I + L GV DYM V T H V+ ++G NSI++V G N P+
Sbjct: 64 DGYGKAIIENLKANGVNTDYMETVTHKKSGTAHIVL---AEGDNSIVVVKGANDDISPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ L + IVL+Q+EIP+ +V R+ +PVI + P+ Q +
Sbjct: 120 YAKSALAKLPGIDIVLIQQEIPEETVEEVCSYCRAQQIPVILNPAPAR-PLKQSTIEDAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA A +DTTGAGDTF A+ AV EG+ E+ L FA AASL VQ GA
Sbjct: 220 DGTAERLVPAFPAEAVDTTGAGDTFNAALAVALAEGRDIEQALLFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPARKEVEELL 292
>gi|428297386|ref|YP_007135692.1| ribokinase [Calothrix sp. PCC 6303]
gi|428233930|gb|AFY99719.1| ribokinase [Calothrix sp. PCC 6303]
Length = 310
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 165/308 (53%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ RLP GET+ GGKGANQA A+L PT+ VG+VG
Sbjct: 3 VIVFGSINIDLVATAPRLPVAGETLLGGEFFKAPGGKGANQAVAVARLGIPTHLVGRVGA 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
+ G + D+L GVR + NV + V +G AV+++ G+N II++ G N E
Sbjct: 63 HSFGNELIDSLQVAGVRTE--NVSIEATVSSGVAVIIVGDGGENQIIVIPGANGYVDNED 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
L+++ A ++LLQ E+P S + AKAA + GV VI D + + IP EL + +D
Sbjct: 121 VA-RLLQILPTAKVLLLQLEVPMSAIVAAAKAAHNLGVKVILDPAPVQSNIPDELYHLVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE E G++ G P + ++A + GV+ +VKLG+KG + E
Sbjct: 180 IITPNEVEAGQIVGFPVVDEDSAAQATKTLLEKGVKCAIVKLGSKGVYCGTQDES----F 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA V +DTT AGD F A G E S EC+ + AAA +L +GA PS+PDR
Sbjct: 236 FIPAFTVQAVDTTAAGDAFNGGLAAGLAEDLSLRECVVWGAAAGALAAMKQGAQPSLPDR 295
Query: 368 KSVLNLLQ 375
LQ
Sbjct: 296 FMFDAFLQ 303
>gi|385205765|ref|ZP_10032635.1| ribokinase [Burkholderia sp. Ch1-1]
gi|385185656|gb|EIF34930.1| ribokinase [Burkholderia sp. Ch1-1]
Length = 310
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 152/304 (50%), Gaps = 6/304 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ LP+ GET+ +AGGKGANQA A++ +G VG
Sbjct: 10 VLVVGSINTDLVARAPHLPRPGETIGGHEFSQVAGGKGANQAVAAARIGAQVAMIGCVGS 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG L G+ D V PTG A+V + DGQN+I++V G+N P+
Sbjct: 70 DANGAQRVKDLEVEGI--DCSGVEVHPTQPTGVAMVTVSDDGQNTIVVVAGSNGELTPQS 127
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ +K +V+ Q E P DSV+ +A AR G + + P+P E L +
Sbjct: 128 VARHE-AAIKACDVVVCQLETPWDSVHATLAL-ARRLGKTTVLNPAPATGPLPAEWLPLV 185
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE E L G+P +S A + + G + V+V LGA+G+ L VEG + +
Sbjct: 186 DYLVPNEVEAAILAGLPVESQSGARRAATELQQGGARNVIVTLGAQGAYLLVEGGEG-RH 244
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P + +DTT AGDTF FA + E + A AA++ V GA PS+P R
Sbjct: 245 FPAPQVQAVDTTAAGDTFIGVFAAQLASRQPLEGAINLAQRAAAISVTRAGAQPSIPTRA 304
Query: 369 SVLN 372
V N
Sbjct: 305 EVDN 308
>gi|421768028|ref|ZP_16204740.1| Ribokinase [Lactobacillus rhamnosus LRHMDP2]
gi|421772596|ref|ZP_16209250.1| Ribokinase [Lactobacillus rhamnosus LRHMDP3]
gi|411183371|gb|EKS50509.1| Ribokinase [Lactobacillus rhamnosus LRHMDP3]
gi|411186715|gb|EKS53837.1| Ribokinase [Lactobacillus rhamnosus LRHMDP2]
Length = 313
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDAILHIQRLPQPGETIQMDAFSKAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L + Y+ D TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGELVKNQIDTQYVATTAD--TETGQAYILLQASGQNSIIIQHGANFELT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P +++ A V+ + E P + + K A++A I + +P+ LL
Sbjct: 120 PADV-QRATGLIQSADFVVAELETPVAATAEAFKIAKAADKVTILNPAPAQKDLPEALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + + H++G++ V++ LG+KGS + ++G+
Sbjct: 179 NVDLIAPNETESELITGIPVTDEASMRHSAAYYHQLGIRGVVITLGSKGSFISLDGQA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPS 363
+++PA +V +DTT AGDTF + + + + +A+ A+S VQ GA PS
Sbjct: 237 --TLVPAFKVKAVDTTAAGDTFIGALVSNLQPDLGNIVDAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|110802146|ref|YP_698919.1| ribokinase [Clostridium perfringens SM101]
gi|110682647|gb|ABG86017.1| ribokinase [Clostridium perfringens SM101]
Length = 310
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 170/317 (53%), Gaps = 28/317 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +PKVGET+ +K+ Q +AGGKGANQA + + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDMPKVGETILSKSFQKIAGGKGANQAVAAKRSGAEVFMISKIGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG+ + D L + + Y V +D PTG A++M+ +G NSII+ G+NM+ ++
Sbjct: 66 NGRELRDKLVEDNIDVKY--VFEDRIEPTGMALIMVNDNGNNSIIVNAGSNMTLTKDEIH 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ ++K++ I++ Q E P+ + I+ K A+ G I + AP I +LL +
Sbjct: 124 SAE-NLIKESDIIISQFETPEDITIEAFKIAKENGKVTILNP----APAKKIKDQLLKYT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEGEK 304
DI+ PNE+E LTG+ E +A GV+ +++ LG KG+AL F E
Sbjct: 179 DIIVPNETEAELLTGIEIKDIEDAKKAGDIFLDKGVKFIIITLGEKGAALIGKDFCE--- 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSRE---ECLRFAAAAASLCVQVK 358
I+ A RV IDTT AGD+F + + RE +RF +S+ VQ K
Sbjct: 236 -----IVLAYRVNAIDTTAAGDSFIGGLSSKLDTKNLGRETLSSSIRFGNKVSSIAVQRK 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P VL + +
Sbjct: 291 GAQPSIPYLHEVLEVYK 307
>gi|217076774|ref|YP_002334490.1| ribokinase [Thermosipho africanus TCF52B]
gi|217036627|gb|ACJ75149.1| ribokinase [Thermosipho africanus TCF52B]
Length = 302
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 165/311 (53%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPT---YFVGQ 126
+ VVGS+N D+ + ++R GET A+ + GGKG+NQA AKLS YF+
Sbjct: 2 IAVVGSSNMDVVLTVERFTLPGETQKAQKLEFFPGGKGSNQAVSIAKLSKKNSNVYFLTC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D+ G+++ + Y+ VV D G A + + G+N I+I G N +
Sbjct: 62 IGNDSYGRILKGQYDKLNIE-GYV-VVDDN---NGLAFIEVTKKGENRIVIYPGANRNLT 116
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E + E + +A +LLQ EIP + A+ G VIFD + I +E+
Sbjct: 117 KEIIKKHE-EKLLEADYILLQNEIPFESTLYSARIFSENGKIVIFDPAPVSG-IEKEIFQ 174
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
F+D L+PNE E+ LT + ++ K +GV++++VKLG+KG ++ EG+K I
Sbjct: 175 FVDFLTPNEEEIKLLTEKFFGEFVSYEDSYFKLKSLGVKKLIVKLGSKG-VIYFEGDKRI 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IP+ +V +DTT AGD F +F V E ++ L FA+AAA+L V KGA S+
Sbjct: 234 E---IPSFKVKAVDTTAAGDVFNGAFVVALHENLDIKKSLEFASAAAALSVTKKGAQNSI 290
Query: 365 PDRKSVLNLLQ 375
P RK V N L
Sbjct: 291 PSRKEVENFLN 301
>gi|384161212|ref|YP_005543285.1| ribokinase [Bacillus amyloliquefaciens TA208]
gi|384170304|ref|YP_005551682.1| ribokinase [Bacillus amyloliquefaciens XH7]
gi|328555300|gb|AEB25792.1| ribokinase [Bacillus amyloliquefaciens TA208]
gi|341829583|gb|AEK90834.1| ribokinase [Bacillus amyloliquefaciens XH7]
Length = 293
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 156/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V +R PK GETV QT+ GGKGANQA ++L Y VG+VG
Sbjct: 4 ICVIGSCSMDLVVTSERRPKAGETVLGADFQTVPGGKGANQAVAASRLGANVYMVGKVGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV DYM + T H V+ ++G NSI++V G N P
Sbjct: 64 DSYGKAIIENLQANGVNTDYMETITHKKSGTAHIVL---AEGDNSIVVVKGANDDISP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ L + IVL+Q+EIP+ +V R+ +PVI + P+ Q +
Sbjct: 120 YAKTALAKLPGIDIVLIQQEIPEETVEEVCSYCRAHQIPVILNPAPAR-PLKQSTIENAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA +DTTGAGDTF A+FAV EG+ E+ L FA AASL VQ GA
Sbjct: 220 DGTAERLVPAFPVEAVDTTGAGDTFNAAFAVALAEGQDIEQALLFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPARKEVEELL 292
>gi|373466376|ref|ZP_09557693.1| ribokinase [Haemophilus sp. oral taxon 851 str. F0397]
gi|371760630|gb|EHO49308.1| ribokinase [Haemophilus sp. oral taxon 851 str. F0397]
Length = 306
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 158/310 (50%), Gaps = 12/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ Q + GGKGANQA A+L F+G VG
Sbjct: 5 LTVLGSINADHVISVPYFSKPGETLTGDNYQLVYGGKGANQAVAAARLGANVEFIGCVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +A S G+ D N+ TG A + + G+NSI++ G N + EK
Sbjct: 65 DVIGETMKNAFSQEGI--DTTNIHSISQEMTGMAFIQVAQSGENSIVLARGAN-AHLDEK 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
+ ++ +L+Q E P S AK A+ GV V+ + A D + LL+ I
Sbjct: 122 LVRHSEAKIAQSNYLLMQLETPISGVELAAKIAQENGVKVVLNPAPARD--LSDTLLSMI 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI++PNE+E LTG+ + EA HK G+ V++ LG KG + GE
Sbjct: 180 DIITPNETEAEILTGVRVSDEQSAVEAAQVFHKKGIDCVMITLGEKGVLVSQNGET---- 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
II RV +DTT AGDTF F +EG+S E +RF AAA++ V KGA PS+P
Sbjct: 236 RIINGFRVKAVDTTAAGDTFNGGFVTALLEGQSFENAVRFGQAAAAISVTRKGAQPSIPT 295
Query: 367 RKSVLNLLQY 376
R+ L L +
Sbjct: 296 RQETLEFLAH 305
>gi|410093691|ref|ZP_11290166.1| carbohydrate kinase PfkB [Pseudomonas viridiflava UASWS0038]
gi|409758906|gb|EKN44158.1| carbohydrate kinase PfkB [Pseudomonas viridiflava UASWS0038]
Length = 306
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 155/303 (51%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET+ ++ T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLTGESFDTVPGGKGANQAVAAARLGAEVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL ++D V GVPTG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGEQLRAAL--LAEQIDCQAVTVVDGVPTGIASIVVDANSQNAIVIVAGGNGQLTPAL 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + IV+ Q E+P AR G VI + P+P + ID
Sbjct: 123 IKRFD-PLLAGSDIVICQLEVPTETVFHTLSRARELGKTVILNPAPASEPLPAHWYSLID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L+G+ DS +A + G + V++ LG +G+ LF
Sbjct: 182 YLIPNESEAQALSGINVDSPASAQKAALALLAAGARNVIITLGEQGT-LFASAA---GVE 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IP RV +DTT AGDTF FA G+S + +RF AAA+L V GA PS+P
Sbjct: 238 HIPTRRVQAVDTTAAGDTFVGGFAAALARGQSESQAIRFGQAAAALSVTRAGAQPSIPTF 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|383755339|ref|YP_005434242.1| putative ribokinase [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381367391|dbj|BAL84219.1| putative ribokinase [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 302
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 164/308 (53%), Gaps = 20/308 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D V +DR P+ GETV A+ + + GGKGANQA KL T +G VG+
Sbjct: 4 VLVVGSLNMDFAVYMDRRPQAGETVMAQGMKLVPGGKGANQAYALGKLGADTSMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L V +D + + GV TG A + ++ GQNSI ++ G N S
Sbjct: 64 DTFGQQMLANLEH--VSVDTAGIKQIAGVETGKAFIEIEDSGQNSISVIAGANASV---- 117
Query: 190 FGDEDL-----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
DE L E KA V++Q EIP I AK A+ V+ D A +P EL
Sbjct: 118 --DEGLVLAQAERFAKADAVVMQLEIPVPSVIAAAKLAKKHNKTVVLDPAPARADLPDEL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
+DI PNE+EL LTG+PT++ E++ A GV+ VLV LG G+ L +
Sbjct: 176 WAQVDITKPNETELALLTGLPTNTEEEVVTAARSLIAKGVKNVLVTLGGDGTLLV--NDS 233
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+++ PA +V +DTT AGD F A+F F +G++ + F A A+++ V +GA
Sbjct: 234 TVQK--FPAYKVKAVDTTAAGDCFLAAFMSRF-DGENFATAVDFGAKASAIAVTRQGAQT 290
Query: 363 SMPDRKSV 370
S+P + V
Sbjct: 291 SIPTVEEV 298
>gi|261215514|ref|ZP_05929795.1| ribokinase [Brucella abortus bv. 3 str. Tulya]
gi|260917121|gb|EEX83982.1| ribokinase [Brucella abortus bv. 3 str. Tulya]
Length = 313
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 163/312 (52%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 TLSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+++AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|161511003|ref|YP_087475.2| ribokinase [Mannheimia succiniciproducens MBEL55E]
Length = 306
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 151/307 (49%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSINADHVISVPHFVKPGETLTGSNYHIAYGGKGANQAVAAARLGADVDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + A G+ ++ + TG A++ + G+NSI+I G N E
Sbjct: 64 DDIGKAMKAAFERDGIHTHTISTIPHQ--TTGIAMIQVAESGENSIVISAGANAHLTEEL 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E + A +L+Q E P S + A A+ G V+ + P+ LL ID
Sbjct: 122 LAQHQ-ESIAHADCLLMQLETPISAVEKAAVFAKRNGTKVVLNPAPAQ-PLSDHLLAHID 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + +EA H G++ VL+ LG+KG G Q
Sbjct: 180 MITPNETEAEILTGVQVTDEQSAAEAAQVFHHKGIETVLITLGSKGVFFSSRG----VQR 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IIP RV +DTT AGDTF + +E KS EE +RFA AA++ V KGA PS+P R
Sbjct: 236 IIPGFRVKAVDTTAAGDTFNGALITALLEDKSMEEAIRFAHGAAAISVTRKGAQPSIPSR 295
Query: 368 KSVLNLL 374
+ L L
Sbjct: 296 EETLAFL 302
>gi|242280015|ref|YP_002992144.1| ribokinase [Desulfovibrio salexigens DSM 2638]
gi|242122909|gb|ACS80605.1| ribokinase [Desulfovibrio salexigens DSM 2638]
Length = 308
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 164/306 (53%), Gaps = 12/306 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P L+V+GS N D +++D P+ GETV Q + GGKGANQA A+L F+ V
Sbjct: 4 PRLIVLGSVNADHVLQVDNFPRPGETVTGHGYQIIPGGKGANQAVAAARLGAEIGFIACV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D G+ + + G+ + V+ G+PTG A++ + + G+N+I I N + P
Sbjct: 64 GDDDFGRRMINEFQQDGIETSAVMTVE--GLPTGIALIQIAAGGENAISISAEANAALTP 121
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E L ++++A +L+Q E P VAK AR AG VI + A +P LL
Sbjct: 122 EAL-KPHLGLIREAETLLMQLESPLETIELVAKEAREAGTKVILNPAPARA-LPDSLLAN 179
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV---EGEK 304
+DI++PNE+E LTG+ +S + + A H GV+ VL+ LG KG+ FV EG+K
Sbjct: 180 LDIITPNETEAELLTGVKVESEDDAAMAACVLHGKGVETVLITLGEKGA--FVSRAEGKK 237
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I+ + +DTT AGDTF + +G S E+ + FA AA++ V GA S+
Sbjct: 238 LIRGYKVDP---VDTTAAGDTFNGALVASMQKGASLEQAIGFAHGAAAISVTRLGAQTSI 294
Query: 365 PDRKSV 370
P + V
Sbjct: 295 PSLEEV 300
>gi|169338011|ref|ZP_02621067.2| ribokinase [Clostridium botulinum C str. Eklund]
gi|169295520|gb|EDS77653.1| ribokinase [Clostridium botulinum C str. Eklund]
Length = 299
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 167/303 (55%), Gaps = 16/303 (5%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ ++IDR+ KVGET+ AK + ++GGKGANQA ++++ + +VG D NG+++
Sbjct: 1 MDVVLKIDRMVKVGETIFAKDLKNISGGKGANQAIACSRMNSKVSMISKVGLDGNGQILV 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L + +Y + KD V TG A++ + +G NSII+ G NM+ E+ +E EV
Sbjct: 61 NKLKENNINTNY--IFKDSEVSTGMALITVDDEGNNSIIVASGANMTITEEEI-NEASEV 117
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFIDILSPN 254
++ + IV+ Q E+P ++ K A+ I + AP I +ELL + DI+ PN
Sbjct: 118 IRNSDIVISQFEVPVKTILEGFKLAKQYNKLTILNP----APAKEIDKELLKYTDIIIPN 173
Query: 255 ESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAA 314
E+E LTG+ E+ + G++ V++ LG+KG+A+ + + Q+
Sbjct: 174 ETEAFELTGVQVTDLNSAKESSRVLIEDGIKYVIITLGSKGAAVITKENSDLVQAF--KV 231
Query: 315 RVIDTTGAGDTFTASFA----VGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+DTT AGD+F FA V + ++ ++ ++F +S+ VQ +GA PS+P K V
Sbjct: 232 EAVDTTAAGDSFIGGFASKLDVNNINFENIKKSIKFGNMVSSITVQREGAEPSIPYLKEV 291
Query: 371 LNL 373
NL
Sbjct: 292 QNL 294
>gi|373849261|ref|ZP_09592062.1| ribokinase [Opitutaceae bacterium TAV5]
gi|372475426|gb|EHP35435.1| ribokinase [Opitutaceae bacterium TAV5]
Length = 332
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 162/327 (49%), Gaps = 27/327 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKL-SHPTY--FVGQ 126
+ +VGSAN D+ + + LP+ GET+ T GGKGANQA + S P + FVG+
Sbjct: 11 VAIVGSANMDLSIPVTCLPRTGETILGGDMTTNPGGKGANQAVAAQRAASRPGFCRFVGR 70
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+D G+ + +AL V D ++ G P+G A +M+ +G N+I++ G N
Sbjct: 71 VGDDVFGRQLRNALDADSV--DTAALLTTPGAPSGTAAIMVNPEGDNAIVVSPGANARLT 128
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMD--------A 238
P E + A ++ +Q E+P AR AGV I D A
Sbjct: 129 PADIAGVR-EAITTAAVLTVQLEVPFDTVAAALSLAREAGVLTILDPAPAPQPASAGALA 187
Query: 239 PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL 298
+P L +DI SPN+SE LTG+ D + A + + G + V++KLG G+A+
Sbjct: 188 TLPDALWQ-VDIFSPNQSEARLLTGIAVDDLDSARAAGERLLQFGPKTVVLKLGGLGAAI 246
Query: 299 FVE--------GEKPIKQSIIPAAR---VIDTTGAGDTFTASFAVGFVEGKSREECLRFA 347
G P+ I PA R V+DTT AGDTFT + A EG+S E +RFA
Sbjct: 247 ITAAPSGGGQGGNAPVFTHI-PAIRIPAVVDTTAAGDTFTGALATALAEGRSLAEAVRFA 305
Query: 348 AAAASLCVQVKGAIPSMPDRKSVLNLL 374
A SL V+GA ++P R+ +L L
Sbjct: 306 GIAGSLACTVRGAQSAIPHRRDILARL 332
>gi|52306390|gb|AAU36890.1| RbsK protein [Mannheimia succiniciproducens MBEL55E]
Length = 310
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 151/307 (49%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 8 LTVLGSINADHVISVPHFVKPGETLTGSNYHIAYGGKGANQAVAAARLGADVDFIACIGD 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + A G+ ++ + TG A++ + G+NSI+I G N E
Sbjct: 68 DDIGKAMKAAFERDGIHTHTISTIPHQ--TTGIAMIQVAESGENSIVISAGANAHLTEEL 125
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E + A +L+Q E P S + A A+ G V+ + P+ LL ID
Sbjct: 126 LAQHQ-ESIAHADCLLMQLETPISAVEKAAVFAKRNGTKVVLNPAPAQ-PLSDHLLAHID 183
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + +EA H G++ VL+ LG+KG G Q
Sbjct: 184 MITPNETEAEILTGVQVTDEQSAAEAAQVFHHKGIETVLITLGSKGVFFSSRG----VQR 239
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IIP RV +DTT AGDTF + +E KS EE +RFA AA++ V KGA PS+P R
Sbjct: 240 IIPGFRVKAVDTTAAGDTFNGALITALLEDKSMEEAIRFAHGAAAISVTRKGAQPSIPSR 299
Query: 368 KSVLNLL 374
+ L L
Sbjct: 300 EETLAFL 306
>gi|170719112|ref|YP_001783448.1| ribokinase [Haemophilus somnus 2336]
gi|168827241|gb|ACA32612.1| ribokinase [Haemophilus somnus 2336]
Length = 317
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 172/322 (53%), Gaps = 29/322 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-----PTYFV 124
L V+GS N D + + K GET++ K GGKGANQA A+L+ FV
Sbjct: 5 LTVLGSINADHVISVPHFAKPGETLSGKQYHIAYGGKGANQAVAAARLADFSQGATVNFV 64
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVP---TGHAVVMLQSDGQNSIIIVGGT 181
G +G D G+ + A + G+ NV +P TG A++ + G+NSI+I G
Sbjct: 65 GCIGSDDIGRAMKKAFAQDGI-----NVATITEIPNEMTGIAMIQVADSGENSIVISAGA 119
Query: 182 NMSCWPE---KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDA 238
N PE KF E +++A +L+Q E P + ++ AK A+ G V+ + +
Sbjct: 120 NAYLTPEIVDKFATE----IERADYLLMQLETPLNAILEAAKLAKKHGATVVLNPAPAN- 174
Query: 239 PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL 298
+P ELL+ +D+++PNE+E LTG+ + ++A H+ GV VL+ LG+KG +
Sbjct: 175 QLPDELLSLLDMITPNETETEILTGVKVTDEQSAAKAASVLHQKGVATVLITLGSKG--V 232
Query: 299 FVEGEKPIKQ----SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
+V + ++ +I RV +DTT AGDTF +F +E KS +E +RFA AAA+
Sbjct: 233 YVSRKSSTQELGQNKVIAGFRVNAVDTTAAGDTFNGAFLTALLENKSLDEAIRFAHAAAA 292
Query: 353 LCVQVKGAIPSMPDRKSVLNLL 374
+ V +GA PS+P R+ L+ L
Sbjct: 293 ISVTRQGAQPSIPTRRETLDFL 314
>gi|28211945|ref|NP_782889.1| ribokinase [Clostridium tetani E88]
gi|28204388|gb|AAO36826.1| ribokinase [Clostridium tetani E88]
Length = 309
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 163/303 (53%), Gaps = 20/303 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
++GS N DI +++DR+ KVGET+ ++ +AGGKGANQ A+L Y +G++G+D
Sbjct: 6 ILGSINMDIVLKVDRMAKVGETLLTRSLDKVAGGKGANQGVAAARLGSKVYMIGKLGKDD 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG ++ + + ++Y ++KD PTG A+V + DG NSI++V G NMS E
Sbjct: 66 NGDILYRNIENDNINVEY--ILKDDKEPTGMAIVTVDKDGNNSIVVVSGANMSLKKEDIY 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ E +K + I++ Q E P V K A+S GV I + AP I + LL
Sbjct: 124 -QFKEAIKDSNILITQFETPIDVAEDAFKLAKSFGVTTILNP----APAKEITENLLKNT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE E +T + + I ++ + G++ V++ LG KG+A+ K
Sbjct: 179 DIIIPNEMEAFEITKIKIKNENDIKKSAQVFLERGIKFVIITLGEKGAAII----SKYKF 234
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLR----FAAAAASLCVQVKGAIP 362
IIPA +V IDTT AGD+F + A E + E ++ + +S+ VQ +GA
Sbjct: 235 EIIPAYKVNAIDTTAAGDSFIGALAHKLGEKELSFENIKEGVLYGNKVSSIVVQKEGAQS 294
Query: 363 SMP 365
S+P
Sbjct: 295 SIP 297
>gi|383761125|ref|YP_005440107.1| ribokinase [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381381393|dbj|BAL98209.1| ribokinase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 306
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 159/312 (50%), Gaps = 9/312 (2%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
+ P + VVGS N D+ ++R P+ GET+ + T GGKGANQA A+L VG
Sbjct: 2 SAPSICVVGSINLDMNAYVERFPRPGETLHGRRFTTGYGGKGANQAVMAARLGAKVSMVG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
++G+D G + L G+R D++ K GV +G AV+ + GQN II++ G N
Sbjct: 62 RIGDDIFGHDMRRNLESEGIRTDFVRESK--GVSSGVAVITIDEQGQNQIIVIPGANGLV 119
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+E + A ++L Q E+P N+ + AR+AGV IF++ + + +P+E+
Sbjct: 120 TAVDV-EEAQAAITGAQVLLCQMEVPMEANLAALRIARNAGVTTIFNSAPVSSEVPEEVY 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI PNESE LTG+P + + A G + L+ LGA+G L+V +
Sbjct: 179 QLSDIFCPNESEAELLTGVPVHTLDDARLAASMIVTRGARAALITLGAQG-CLYVTAD-- 235
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
++ +PA RV +DTTGAGD F S A G E + A A++ VQ G S
Sbjct: 236 -QEEHVPAPRVKAVDTTGAGDAFVGSLAHFLAAGLPVLEAIARANTIAAISVQHPGTQAS 294
Query: 364 MPDRKSVLNLLQ 375
P R + L+
Sbjct: 295 YPRRADLPETLR 306
>gi|66045395|ref|YP_235236.1| carbohydrate kinase PfkB [Pseudomonas syringae pv. syringae B728a]
gi|63256102|gb|AAY37198.1| Carbohydrate kinase, PfkB [Pseudomonas syringae pv. syringae B728a]
Length = 306
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 152/303 (50%), Gaps = 9/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL + + VV+ GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEQIDCQAVTVVE--GVSTGIASIVVDANSQNAIVIVAGGNGRLTPAL 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + IV+ Q E+P AR+ G VI + P+P ID
Sbjct: 123 LERFD-ALLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPASWYALID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE LTG+ DS A G + V++ LG G+ LF
Sbjct: 182 YLIPNESEAQTLTGVNVDSPAAAENAASVMLAAGARNVIITLGEHGT-LFANAS---GMD 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA RV +DTT AGDTF FA G + +RF AAA++ V GA PS+P
Sbjct: 238 HIPARRVQAVDTTAAGDTFVGGFAAALSAGHGELQAIRFGQAAAAISVTRAGAQPSIPTF 297
Query: 368 KSV 370
+ V
Sbjct: 298 EEV 300
>gi|366089904|ref|ZP_09456270.1| ribokinase [Lactobacillus acidipiscis KCTC 13900]
Length = 303
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 162/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D + + R+ K GET+ AK + GGKGANQA ++ T F+G VG+
Sbjct: 4 VTVVGSINLDTNLRVKRMVKPGETIHAKEHYSAGGGKGANQAVAASRAGAQTSFIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK + D L G+ L ++ + D TG A + + +G+N+I I G N + P++
Sbjct: 64 DAPGKQMMDLLKNEGIDLTGIDTIAD--ESTGQAFITVDDEGENAITIYAGANFAFGPKE 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++K + V+ Q E P + ++ + A AGV I + + I +ELL D
Sbjct: 122 IAQKSA-LLKDSDFVIAQFETPIAATVKAFEIAHEAGVKTILNPAPGEDHISEELLKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ + +A K H++GV ++ +G+KG+ G
Sbjct: 181 MITPNETEAETITGIHVEDEASARKAAAKLHELGVDVAIITIGSKGAFYDYNG----VSE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + + S +E + F A+SL VQ GA PS+P
Sbjct: 237 LVPAFKVKAVDTTAAGDTFIGAMSSILKPDFSNLKEAILFGNKASSLTVQRYGAQPSIPY 296
Query: 367 RKSV 370
+K +
Sbjct: 297 QKEI 300
>gi|385266493|ref|ZP_10044580.1| pfkB family carbohydrate kinase [Bacillus sp. 5B6]
gi|394991138|ref|ZP_10383945.1| hypothetical protein BB65665_01864 [Bacillus sp. 916]
gi|452857217|ref|YP_007498900.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|385150989|gb|EIF14926.1| pfkB family carbohydrate kinase [Bacillus sp. 5B6]
gi|393807910|gb|EJD69222.1| hypothetical protein BB65665_01864 [Bacillus sp. 916]
gi|452081477|emb|CCP23245.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 293
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 156/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V +R PK GETV QT+ GGKGANQA ++L Y VG+ G
Sbjct: 4 ICVIGSCSMDLVVTSERRPKAGETVLGTDFQTVPGGKGANQAVAASRLGANVYMVGKAGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV DYM V T H V+ ++G NSI++V G N P+
Sbjct: 64 DSYGKAIIENLKANGVNTDYMETVTHKKSGTAHIVL---AEGDNSIVVVKGANDDISPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ L + IVL+Q+EIP+ +V R+ +PVI + P+ Q +
Sbjct: 120 YAKSALAKLPGIDIVLIQQEIPEETVEEVCSYCRAQQIPVILNPAPAR-PLKQSTIEDAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA A +DTTGAGDTF A+ AV EG+ E+ L FA AASL VQ GA
Sbjct: 220 DGTAERLVPAFPAEAVDTTGAGDTFNAALAVALAEGRDIEQALLFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPARKEVEELL 292
>gi|325261364|ref|ZP_08128102.1| ribokinase [Clostridium sp. D5]
gi|324032818|gb|EGB94095.1| ribokinase [Clostridium sp. D5]
Length = 317
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 172/314 (54%), Gaps = 17/314 (5%)
Query: 68 PPLVVVGSANFDIYVE-IDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P ++VVGS N D++VE + +PK GE++ GGKG+NQA A VG+
Sbjct: 4 PKILVVGSMNMDLFVEGANTIPKFGESIMCGNYGYATGGKGSNQAIAAALQGAEVTMVGR 63
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQN-SIIIVGGTNMSC 185
+GED NG+ +T+ + GV +Y +V D TG A+++L SDG+ S + +G C
Sbjct: 64 LGEDTNGESLTNEMKKAGVHTEY--IVTDKEKQTGLALMLLNSDGRYVSYVALGANGNIC 121
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAG-GMDAPIPQEL 244
+ D E K +V++Q E+P + + A+ +PV DAG M+ IP E
Sbjct: 122 AGDVKAALDAE---KFDMVIMQLEMPLETVYRTYELAKERNIPVFLDAGPAMN--IPLER 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCH-KMGVQQVLVKLGAKGSALFVEGE 303
L + ILSPNE+E LTG+ D+ E+ EA + ++ + V++KLG++G AL +GE
Sbjct: 177 LQGLYILSPNEAETEALTGINPDTEEKAVEAAKWLYGQVHPRYVVLKLGSRG-ALLYDGE 235
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+IP +V +D+T AGDTF A+ A+ +G +E +RFA AAA +CV GA
Sbjct: 236 TA---ELIPCFKVKAVDSTAAGDTFGAALAIRLCKGDRMQEAIRFAHAAAGICVSRMGAQ 292
Query: 362 PSMPDRKSVLNLLQ 375
S+P V L+
Sbjct: 293 VSIPKEAEVEEFLE 306
>gi|167856114|ref|ZP_02478855.1| ribokinase [Haemophilus parasuis 29755]
gi|167852755|gb|EDS24028.1| ribokinase [Haemophilus parasuis 29755]
Length = 307
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 174/310 (56%), Gaps = 10/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + PK GET+ Q GGKGANQA A+ +F+G +G
Sbjct: 5 LCVLGSINVDHVIRVPYFPKAGETLTGYGYQIAYGGKGANQAVAAARCGANVHFIGAIGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + A G+ + ++V+++ TG A++ + G+NSI+I G N + E
Sbjct: 65 DQIGKTMKQAFEQDGINTEAISVIENQ--STGLAMIQVADLGENSIVISAGAN-ADLSEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++A I+L+Q E P + AK A+ AGV V+ + P+P LL+ ID
Sbjct: 122 LVEQHKSHIEQADILLMQLESPLQAVAKAAKIAKKAGVKVVLNPAPAQ-PLPDSLLSQID 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ + + + A H++G++ VL+ LG+KG LF EK +
Sbjct: 181 IITPNETEAEILTGIKVTNEQTAAVAANYFHQLGIETVLITLGSKG--LFYS-EKG-QGE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IIP V +DTT AGDTF +F +EGKS +E +RFA AAA++ V GA ++P R
Sbjct: 237 IIPGFLVDAVDTTAAGDTFNGAFVTALLEGKSPKESIRFAHAAAAISVTRMGAQTAIPRR 296
Query: 368 KSVLNLLQYA 377
+ + LL ++
Sbjct: 297 EEIEALLLFS 306
>gi|313892607|ref|ZP_07826194.1| ribokinase [Dialister microaerophilus UPII 345-E]
gi|313119004|gb|EFR42209.1| ribokinase [Dialister microaerophilus UPII 345-E]
Length = 296
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 18/305 (5%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ VE+DR P GETV GGKGANQA A+L Y VG VG DA
Sbjct: 6 VIGSCNMDLVVEVDRRPMPGETVLGNKMVLSPGGKGANQAVAAARLGAKVYMVGCVGNDA 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
G+++ A+ V DY+ V+ + T H V S+G+N+II++ G N S +K
Sbjct: 66 YGQMLKKAMEDSNVNTDYVYVLDNVNTGTAHITV---SNGENTIIVIKGAN-SEVSQKHI 121
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFIDI 250
+E E++ + IVLLQ EI V K +PV+ + A MD +P+E + +
Sbjct: 122 EEAWEIISTSDIVLLQHEISKETIDYVIKRCYEENIPVLLNPAPYMD--VPEEWIKKVKY 179
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
++PNE E + ++ + + G +V++ G +G + E I S
Sbjct: 180 ITPNEHEAALM-------FKGYTRNEILTSNNG--KVIMTAGKEG-VFYGENNSIINISG 229
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+ +DTTGAGDTF +FAV EGK+ +E +RFA AAA+L V GA MP RK V
Sbjct: 230 FD-VKAVDTTGAGDTFNGAFAVARSEGKNMKESIRFANAAAALSVTKFGAQSGMPYRKDV 288
Query: 371 LNLLQ 375
LL+
Sbjct: 289 EELLK 293
>gi|300704657|ref|YP_003746260.1| ribokinase [Ralstonia solanacearum CFBP2957]
gi|299072321|emb|CBJ43655.1| Ribokinase [Ralstonia solanacearum CFBP2957]
Length = 315
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 152/306 (49%), Gaps = 5/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ + LP+ G+TV+A +T+ GGKGANQA A+L +G VG+
Sbjct: 15 VLVVGSLNMDLVIRTPCLPQPGQTVSAPALETIPGGKGANQAVAAARLGSRVAMLGCVGD 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G + + L GV D V PTG A V + GQN+I+IV G N P
Sbjct: 75 DPHGTALREGLRREGV--DTSMVSAHADAPTGIACVTVADSGQNTIVIVAGANRLLTPAM 132
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++A +++ Q E P R G VI + P+P L D
Sbjct: 133 I-DAQQAAFERAKVIVCQLESPPDAVEHALLLGRRLGKTVILNPAPAAGPLPTPWLAACD 191
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E LT P DS E +A H G + V++ LGA+G A +V+ +
Sbjct: 192 YLIPNETEAALLTARPVDSPEAALDAAADLHAQGARHVIITLGARGIA-YVDATTRLLMP 250
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P AR ID T AGDTF + A EG + E ++F AAA++ V GA PS+P R
Sbjct: 251 AYP-ARAIDATAAGDTFVGALATALAEGATPAEAIQFGQAAAAVSVTRLGAQPSIPFRSE 309
Query: 370 VLNLLQ 375
+ + +Q
Sbjct: 310 LASPMQ 315
>gi|419761246|ref|ZP_14287503.1| ribokinase [Thermosipho africanus H17ap60334]
gi|407513686|gb|EKF48578.1| ribokinase [Thermosipho africanus H17ap60334]
Length = 302
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 166/311 (53%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPT---YFVGQ 126
+ VVGS+N D+ + ++R GET A+ + GGKG+NQA AKLS YF+
Sbjct: 2 IAVVGSSNMDVVLTVERFTLPGETQRAQKLEFFPGGKGSNQAVSIAKLSKKNSNVYFLTC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D+ G+ + D ++ Y+ VV D G A + + G+N I+I G N +
Sbjct: 62 IGNDSYGRDLKDQYDKLNIK-GYV-VVDDN---NGLAFIEVTRKGENRIVIYPGANSNLT 116
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E + ++++ A +LLQ EIP + A+ G VIFD + I +E+
Sbjct: 117 KEIVKKHEGKLLE-ADYILLQNEIPFETTLYAARLFSENGKIVIFDPAPVSG-IEKEIFQ 174
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
F+D L+PNE E+ LT + ++ K +GV++++VKLG+KG ++ EG+K I
Sbjct: 175 FVDFLTPNEEEIKLLTEKFFGKFVSYEDSYFKLKSLGVKKLIVKLGSKG-VIYFEGDKRI 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IP+ +V +DTT AGD F +F V E ++ L FA+ AA+L V KGA S+
Sbjct: 234 E---IPSFKVKAVDTTAAGDVFNGAFVVALHENLDIKKSLEFASVAAALSVTKKGAQNSI 290
Query: 365 PDRKSVLNLLQ 375
P RK V N L
Sbjct: 291 PSRKEVENFLN 301
>gi|62316966|ref|YP_222819.1| ribokinase [Brucella abortus bv. 1 str. 9-941]
gi|83268961|ref|YP_418252.1| ribokinase:carbohydrate kinase [Brucella melitensis biovar Abortus
2308]
gi|189022238|ref|YP_001931979.1| Ribokinase [Brucella abortus S19]
gi|237816530|ref|ZP_04595522.1| ribokinase [Brucella abortus str. 2308 A]
gi|260544204|ref|ZP_05820025.1| ribokinase [Brucella abortus NCTC 8038]
gi|260759459|ref|ZP_05871807.1| ribokinase [Brucella abortus bv. 4 str. 292]
gi|260762702|ref|ZP_05875034.1| ribokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260882982|ref|ZP_05894596.1| ribokinase [Brucella abortus bv. 9 str. C68]
gi|423169158|ref|ZP_17155860.1| ribokinase [Brucella abortus bv. 1 str. NI435a]
gi|423171407|ref|ZP_17158081.1| ribokinase [Brucella abortus bv. 1 str. NI474]
gi|423174861|ref|ZP_17161531.1| ribokinase [Brucella abortus bv. 1 str. NI486]
gi|423176739|ref|ZP_17163405.1| ribokinase [Brucella abortus bv. 1 str. NI488]
gi|423180839|ref|ZP_17167479.1| ribokinase [Brucella abortus bv. 1 str. NI010]
gi|423183970|ref|ZP_17170606.1| ribokinase [Brucella abortus bv. 1 str. NI016]
gi|423187119|ref|ZP_17173732.1| ribokinase [Brucella abortus bv. 1 str. NI021]
gi|423189540|ref|ZP_17176149.1| ribokinase [Brucella abortus bv. 1 str. NI259]
gi|62197159|gb|AAX75458.1| hypothetical ribokinase [Brucella abortus bv. 1 str. 9-941]
gi|82939235|emb|CAJ12170.1| Ribokinase:Carbohydrate kinase, PfkB [Brucella melitensis biovar
Abortus 2308]
gi|189020812|gb|ACD73533.1| Ribokinase [Brucella abortus S19]
gi|237787343|gb|EEP61559.1| ribokinase [Brucella abortus str. 2308 A]
gi|260097475|gb|EEW81349.1| ribokinase [Brucella abortus NCTC 8038]
gi|260669777|gb|EEX56717.1| ribokinase [Brucella abortus bv. 4 str. 292]
gi|260673123|gb|EEX59944.1| ribokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260872510|gb|EEX79579.1| ribokinase [Brucella abortus bv. 9 str. C68]
gi|374537001|gb|EHR08519.1| ribokinase [Brucella abortus bv. 1 str. NI435a]
gi|374537493|gb|EHR09005.1| ribokinase [Brucella abortus bv. 1 str. NI474]
gi|374537629|gb|EHR09140.1| ribokinase [Brucella abortus bv. 1 str. NI486]
gi|374547369|gb|EHR18824.1| ribokinase [Brucella abortus bv. 1 str. NI010]
gi|374547774|gb|EHR19227.1| ribokinase [Brucella abortus bv. 1 str. NI016]
gi|374553316|gb|EHR24736.1| ribokinase [Brucella abortus bv. 1 str. NI488]
gi|374556846|gb|EHR28246.1| ribokinase [Brucella abortus bv. 1 str. NI021]
gi|374557094|gb|EHR28493.1| ribokinase [Brucella abortus bv. 1 str. NI259]
Length = 313
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 163/312 (52%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+++AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|421766056|ref|ZP_16202834.1| Ribokinase [Lactococcus garvieae DCC43]
gi|407625426|gb|EKF52130.1| Ribokinase [Lactococcus garvieae DCC43]
Length = 302
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 162/305 (53%), Gaps = 9/305 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ AK T GGKGANQA + TYF+G +G+
Sbjct: 4 ITIIGSINLDTTLRVSNMPKPGETLHAKEHFTAGGGKGANQAVAAKRSGADTYFIGAIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++++ L + + V++ TG A + + G+NSI+I G N + PE
Sbjct: 64 DGAGQMMSELLEYEEIDTSAVEVLESQ--STGQAFITVDDSGENSIMIFSGANNAFTPEH 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++KK+ ++ Q E + K A+ V I + IPQ+LL D
Sbjct: 122 V-EKSQEIIKKSDFLIAQFESSLDSTVAAFKVAKKNQVRTILNPAPARTDIPQDLLATTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ E + EA H +G++ V++ LG+KG+ ++G K
Sbjct: 181 IIVPNETEAELITGIKVTDNESLKEAADYFHNIGIKAVIITLGSKGAYYDIDGG---KSG 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S E + + + A+S+ VQ GA PS+P
Sbjct: 238 IVPAFKVNAVDTTAAGDTFIGAMSTVLKADFSNIIEAITYGSRASSITVQRYGAQPSIPY 297
Query: 367 RKSVL 371
+ ++
Sbjct: 298 KNELV 302
>gi|218260135|ref|ZP_03475559.1| hypothetical protein PRABACTJOHN_01220 [Parabacteroides johnsonii
DSM 18315]
gi|218224719|gb|EEC97369.1| hypothetical protein PRABACTJOHN_01220 [Parabacteroides johnsonii
DSM 18315]
Length = 309
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 156/303 (51%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ ++ LP+ GET+ T GGKGANQA A+L P F+ + G
Sbjct: 11 ILVVGSSNTDMVIKAAHLPRPGETILGGTFFMNPGGKGANQAVAIARLGGPVTFICKTGS 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y V D G P+G A++ + +N I++ G N + P
Sbjct: 71 DIFGHQSQQLFEEEGINTSY--VFSDSGNPSGVALITVDEKAENCIVVASGANANLLPSD 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E +++A +VL+Q E+P VA A G VI + P+P +LL +
Sbjct: 129 L-EKAEEAIERADLVLMQLEVPMETVCFVADIAWQKGKKVILNPAPAH-PLPADLLRHLY 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ EA MGVQ V++ LG+KG+ ++ G K
Sbjct: 187 LITPNETEAEMITGVKITDESSAGEAARALSGMGVQHVIITLGSKGALIYSNG----KAE 242
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++PA +V +DTT AGD F + V EG+S +E RFA A+++ V GA S P R
Sbjct: 243 MVPALKVEAVDTTAAGDVFNGALTVALSEGRSLKEAARFACKASAISVTRVGAQSSAPYR 302
Query: 368 KSV 370
V
Sbjct: 303 NEV 305
>gi|402700403|ref|ZP_10848382.1| ribokinase [Pseudomonas fragi A22]
Length = 306
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 155/301 (51%), Gaps = 5/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ +RLP+ GETV + T+ GGKGANQA A+L VG VG
Sbjct: 5 VVVVGSLNMDLVTRAERLPRPGETVFGQAFGTVHGGKGANQAVAAARLGASVAMVGCVGT 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + L G+ + V G +G A++++ +D QN+I++V G N +
Sbjct: 65 DAYGVQLREGLEAEGIDCQAVRAVAQGA--SGVALIVVDTDSQNTIVVVPGANGCLDAQD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ A +++ Q E+P V K R V+ + P+P + +D
Sbjct: 123 IMTVD-GMLQGAKVIICQLEVPMDTVGHVLKRGRELDKIVVLNPAPASGPLPVQWYALVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L+G+P DS E A +G ++V LG++G AL V ++ + +
Sbjct: 182 YLIPNESEALALSGVPVDSLESAELAARSLMALGASNIIVTLGSQG-ALLVSAQRVVHFA 240
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P +D T AGDTF +F+ GK ++ +RFA AA+L V GA PS+P +
Sbjct: 241 -APKVEAVDATAAGDTFVGAFSAALAAGKGEDDAIRFAQTAAALSVTRAGAQPSIPGLQD 299
Query: 370 V 370
+
Sbjct: 300 I 300
>gi|426410297|ref|YP_007030396.1| ribokinase [Pseudomonas sp. UW4]
gi|426268514|gb|AFY20591.1| ribokinase [Pseudomonas sp. UW4]
Length = 305
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 6/299 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLPK GET+ + T++GGKGANQA A+L +G
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPKGGETLIGHSFATVSGGKGANQAVAAARLGAQVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ + DG +G A++++ QN+I+IV G N +
Sbjct: 62 VGNDAYGEALRGALLAEQIDCQAVSTI-DGS--SGVALIVVDDSSQNTIVIVPGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E D V++ A +++ Q E+PD+ K R G VI + P+P
Sbjct: 119 AEAIDRFD-SVIQAADVLICQLEVPDASVGHALKRGRELGKTVILNPAPASRPLPSHWYG 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS E A + +G +V++ LGA+GS LF +G++
Sbjct: 178 SIDYLIPNESEASALSGLSVDSLETAQAAATRLIALGAGKVIITLGAQGS-LFADGQR-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ P + +DTT AGDTF FA G+ + +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPVVKAVDTTAAGDTFVGGFAAALAAGQDEVQAIRFGQVAAALSVTRAGAQPSIP 294
>gi|308175328|ref|YP_003922033.1| ribokinase [Bacillus amyloliquefaciens DSM 7]
gi|384166109|ref|YP_005547488.1| ribokinase [Bacillus amyloliquefaciens LL3]
gi|307608192|emb|CBI44563.1| ribokinase [Bacillus amyloliquefaciens DSM 7]
gi|328913664|gb|AEB65260.1| ribokinase [Bacillus amyloliquefaciens LL3]
Length = 293
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 155/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V +R PK GETV QT+ GGKGANQA ++L Y VG+ G
Sbjct: 4 ICVIGSCSMDLVVTSERRPKAGETVLGADFQTVPGGKGANQAVAASRLGANVYMVGKAGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV DYM + T H V+ ++G NSI++V G N P
Sbjct: 64 DSYGKAIIENLQANGVNTDYMETITHKKSGTAHIVL---AEGDNSIVVVKGANDDISP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ L + IVL+Q+EIP+ +V R+ +PVI + P+ Q +
Sbjct: 120 YAKRALAKLPGIDIVLIQQEIPEETVEEVCSYCRAHQIPVILNPAPAR-PLKQSTIENAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA +DTTGAGDTF A+FAV EG+ E+ L FA AASL VQ GA
Sbjct: 220 DGTAERLVPAFPVEAVDTTGAGDTFNAAFAVALAEGQDIEQALLFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPARKEVEELL 292
>gi|229553415|ref|ZP_04442140.1| ribokinase [Lactobacillus rhamnosus LMS2-1]
gi|258538559|ref|YP_003173058.1| ribokinase [Lactobacillus rhamnosus Lc 705]
gi|385834307|ref|YP_005872081.1| ribokinase [Lactobacillus rhamnosus ATCC 8530]
gi|229313296|gb|EEN79269.1| ribokinase [Lactobacillus rhamnosus LMS2-1]
gi|257150235|emb|CAR89207.1| Ribokinase [Lactobacillus rhamnosus Lc 705]
gi|355393798|gb|AER63228.1| ribokinase [Lactobacillus rhamnosus ATCC 8530]
Length = 313
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ AGGKGANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDAILHIQRLPQPGETIQMDAFSKAAGGKGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DAN + L + Y+ D TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGNDANAAFMRGELVKNQIDTQYVATTAD--TETGQAYILLQASGQNSIIIQHGANFELT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P +++ A V+ + E P + + K A++A I + +P+ LL
Sbjct: 120 PADV-QRATGLIQSADFVVAELETPVAATAEAFKIAKAADKVTILNPAPAQKDLPEALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + ++ H++G++ V++ LG+KGS + + G+
Sbjct: 179 NVDLIAPNETESELITGIPVTDEASMRQSAAYYHQLGIRGVVITLGSKGSFISLNGQA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPS 363
+++PA +V +DTT AGDTF + + + + +A+ A+S VQ GA PS
Sbjct: 237 --TLVPAFKVKAVDTTAAGDTFIGALVSNLQPDLGNIVDAATYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|375364030|ref|YP_005132069.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|451345254|ref|YP_007443885.1| ribokinase [Bacillus amyloliquefaciens IT-45]
gi|371570024|emb|CCF06874.1| ribokinase [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|449849012|gb|AGF26004.1| ribokinase [Bacillus amyloliquefaciens IT-45]
Length = 293
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 156/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V +R PK GETV QT+ GGKGANQA ++L Y VG+ G
Sbjct: 4 ICVIGSCSMDLVVTSERRPKAGETVLGTDFQTVPGGKGANQAVAASRLGANVYMVGKAGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV DYM V T H V+ ++G NSI++V G N P+
Sbjct: 64 DSYGKAIIENLKANGVNTDYMETVTHKKSGTAHIVL---AEGDNSIVVVKGANDDISPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ L + IVL+Q+EIP+ +V R+ +PVI + P+ Q +
Sbjct: 120 YAKSALAKLPGIDIVLIQQEIPEETVEEVCSYCRAHQIPVILNPAPAR-PLKQSTIENAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++P A +DTTGAGDTF A+ AV EG+ E+ L+FA AASL VQ GA
Sbjct: 220 DGTAERLVPGFPAEAVDTTGAGDTFNAALAVALAEGRDIEQALQFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPVRKEVEELL 292
>gi|297250091|ref|ZP_06933792.1| ribokinase [Brucella abortus bv. 5 str. B3196]
gi|297173960|gb|EFH33324.1| ribokinase [Brucella abortus bv. 5 str. B3196]
Length = 313
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 163/312 (52%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+++AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|251794364|ref|YP_003009095.1| ribokinase [Paenibacillus sp. JDR-2]
gi|247541990|gb|ACS99008.1| ribokinase [Paenibacillus sp. JDR-2]
Length = 315
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 166/308 (53%), Gaps = 17/308 (5%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P LVV+GS N DI VE P+VGET+ + + + GGKGANQA GA+L T +G V
Sbjct: 7 PKLVVIGSLNMDIVVETSAYPQVGETITGQRVRFIPGGKGANQAVAGARLGADTVMIGAV 66
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+ + +L GV D V + G +G A + + ++G NSI++V G N P
Sbjct: 67 GDDAFGEELLGSLQKDGV--DIAGVKRIEGTASGIASIYV-AEGDNSIVVVPGANGLVDP 123
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQEL 244
D + +K+A +VLLQ EIP + A+ A++ G V+ + AP +P+EL
Sbjct: 124 GDI-DRSEDKLKEADLVLLQLEIPVETVLYAARKAKALGKLVVLNP----APAQQLPEEL 178
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
+D +PN +EL M D + + A+ + ++G V+ LGA GSA E K
Sbjct: 179 FGLVDYFTPNRTELSGYADMSADG-DSLEPAIRRMMELGAAHVVTTLGASGSAYLDEEGK 237
Query: 305 PIKQS--IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
++ + +P V+DTTGAGD + A+ AV G+ + + +A+ A++L V GA
Sbjct: 238 LVRINGYKMP---VVDTTGAGDCYNAALAVALASGRDLRDAVDYASMASALAVTKFGAQT 294
Query: 363 SMPDRKSV 370
MP + V
Sbjct: 295 GMPAEEEV 302
>gi|91779516|ref|YP_554724.1| putative ribokinase [Burkholderia xenovorans LB400]
gi|91692176|gb|ABE35374.1| putative ribokinase [Burkholderia xenovorans LB400]
Length = 312
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ LP+ GET+ +AGGKGANQA A++ +G VG
Sbjct: 12 VLVVGSINTDLVARAPHLPRPGETIGGHEFSQVAGGKGANQAVAAARIGARVAMIGCVGS 71
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG L G+ D V PTG A+V + DGQN+I++V G+N P+
Sbjct: 72 DANGAQRVKDLEVEGI--DCSGVEVHPTQPTGVAMVTVSDDGQNTIVVVAGSNGELTPQS 129
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ +K +V+ Q E P DSV+ +A AR G + + P+P E L +
Sbjct: 130 VARHE-AAIKACDVVVCQLETPWDSVHATLAL-ARRLGKITVLNPAPATGPLPAEWLPLV 187
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE E L G+P +S A + + G V+V LGA+G+ L VEG + +
Sbjct: 188 DYLVPNEVEAAILAGLPVESQSGARRAATELQQGGAHNVIVTLGAQGAYLLVEGGEG-RH 246
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P +DTT AGDTF FA + E + A AA++ V GA PS+P R
Sbjct: 247 FPAPQVHAVDTTAAGDTFIGVFAAQLASRQPLEGAINLAQRAAAISVTRAGAQPSIPTRA 306
Query: 369 SVLN 372
V N
Sbjct: 307 EVDN 310
>gi|333374063|ref|ZP_08465952.1| ribokinase [Desmospora sp. 8437]
gi|332968346|gb|EGK07415.1| ribokinase [Desmospora sp. 8437]
Length = 312
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 158/308 (51%), Gaps = 16/308 (5%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V+GS N D+ V+ R P++GETV + + GGKGANQA A+L T +G
Sbjct: 5 PARVAVIGSLNMDVVVQTSRPPQMGETVLGEAIHFIPGGKGANQAVAAARLGAHTEMIGS 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG D G+ + ++L GV + V PTG A + L S G NSII+V G N C
Sbjct: 65 VGCDPFGQSLLESLQKSGVETTAVKTVST--APTGVASIQL-SGGDNSIIVVPGANSHCL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
PE + E + +VLLQ EIP + A+ A+ G V+ + AP +P E
Sbjct: 122 PEDV-EAGRERIAGVDVVLLQLEIPLETVMAAARTAKELGKKVVLNP----APARELPGE 176
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEG 302
L D+++PN SEL L+G P E+++EA+ GV V+ LG +G+A+ EG
Sbjct: 177 LYRLADVITPNRSELELLSGHPAQE-EELAEAMQVLLDKGVGCVVTTLGEEGAAILSAEG 235
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
++ + V+DTTGAGD F A A EG E + +A A+L V GA
Sbjct: 236 ---FRRVAVHPVDVVDTTGAGDAFNAGLACALSEGLELAEAVDYAGRVAALAVTRLGAQE 292
Query: 363 SMPDRKSV 370
MP R+ V
Sbjct: 293 GMPTRREV 300
>gi|113460371|ref|YP_718433.1| ribokinase [Haemophilus somnus 129PT]
gi|112822414|gb|ABI24503.1| ribokinase [Haemophilus somnus 129PT]
Length = 317
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 172/322 (53%), Gaps = 29/322 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-----PTYFV 124
L V+GS N D + + K GET++ K GGKGANQA A+L+ FV
Sbjct: 5 LTVLGSINADHVISVPHFAKPGETLSGKQYHIAYGGKGANQAVAAARLADFSQGATVNFV 64
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVP---TGHAVVMLQSDGQNSIIIVGGT 181
G +G D G+ + A + G+ NV +P TG A++ + G+NSI+I G
Sbjct: 65 GCIGSDDIGQAMKKAFAQDGI-----NVATITEIPNEMTGIAMIQVADSGENSIVISAGA 119
Query: 182 NMSCWPE---KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDA 238
N PE KF E +++A +L+Q E P + ++ AK A+ G V+ + +
Sbjct: 120 NAYLTPEIVDKFATE----IERADYLLMQLETPLNAILEAAKLAKKHGATVVLNPAPA-S 174
Query: 239 PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL 298
+P ELL+ +D+++PNE+E LTG+ + ++A H+ GV VL+ LG+KG +
Sbjct: 175 QLPDELLSLLDMITPNETETEILTGVKVTDEQSAAKAASVLHQKGVATVLITLGSKG--V 232
Query: 299 FVEGEKPIKQ----SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
+V + ++ +I RV +DTT AGDTF +F +E KS +E +RFA AAA+
Sbjct: 233 YVSRKSSTQELGQNKVIAGFRVNAVDTTAAGDTFNGAFLTALLENKSLDEAIRFAHAAAA 292
Query: 353 LCVQVKGAIPSMPDRKSVLNLL 374
+ V +GA PS+P R+ L+ L
Sbjct: 293 ISVTRQGAQPSIPTRRETLDFL 314
>gi|323525864|ref|YP_004228017.1| ribokinase [Burkholderia sp. CCGE1001]
gi|323382866|gb|ADX54957.1| ribokinase [Burkholderia sp. CCGE1001]
Length = 307
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 154/307 (50%), Gaps = 7/307 (2%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFV 124
T P + VVGS N D+ RLP GET+A +T +AGGKG NQA A+L +
Sbjct: 5 ETRPRVAVVGSLNMDLVARAPRLPHPGETLAGRTFAQVAGGKGGNQAVAAARLGAQVSML 64
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
G VG DANG + L G+ + ++ P+G A++++ QN+I+IV G+N
Sbjct: 65 GCVGADANGAQLRAGLEAEGIDCAALETGRE---PSGVALIVVDDASQNAIVIVAGSNGE 121
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
PE + V+ A +V+ Q E PD+V+ +A A R VI + P+P
Sbjct: 122 VTPETIARHE-AVLAAADVVICQLETPPDAVHAALAAARRLRKT-VILNPAPATGPLPAA 179
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
L ID L PNE E LTG+P S E+ + A G + VLV LG +G +EG
Sbjct: 180 WLPLIDYLIPNELEAATLTGLPVGSPEEAATAAAVLRAAGARNVLVTLGPRGVQAALEGA 239
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ P +DTT AGDTF FA EG + +RFA AA+L V GA PS
Sbjct: 240 ALVLYD-APKVEAVDTTAAGDTFIGGFAAQLAEGAGVDAAIRFAQRAAALSVTRAGAQPS 298
Query: 364 MPDRKSV 370
+P R +
Sbjct: 299 IPTRAEL 305
>gi|423344190|ref|ZP_17321902.1| ribokinase [Parabacteroides johnsonii CL02T12C29]
gi|409213507|gb|EKN06526.1| ribokinase [Parabacteroides johnsonii CL02T12C29]
Length = 309
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 156/303 (51%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ ++ LP+ GET+ T GGKGANQA A+L P F+ + G
Sbjct: 11 ILVVGSSNTDMVIKAAHLPRPGETILGGTFFMNPGGKGANQAVAIARLGGPVTFICKTGS 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y V D G P+G A++ + +N I++ G N + P
Sbjct: 71 DIFGHQSQQLFEEEGINTSY--VFSDSGNPSGVALITVDEKAENCIVVASGANANLLPSD 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E +++A +VL+Q E+P VA A G VI + P+P +LL +
Sbjct: 129 L-EKAEEAIERADLVLMQLEVPMETVCFVADIAWQKGKKVILNPAPAH-PLPVDLLRHLY 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ EA MGVQ V++ LG+KG+ ++ G K
Sbjct: 187 LITPNETEAEMITGVKITDESSAGEAARALSGMGVQHVIITLGSKGALIYSNG----KAE 242
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++PA +V +DTT AGD F + V EG+S +E RFA A+++ V GA S P R
Sbjct: 243 MVPALKVEAVDTTAAGDVFNGALTVALSEGRSLKEAARFACKASAISVTRVGAQSSAPYR 302
Query: 368 KSV 370
V
Sbjct: 303 NEV 305
>gi|443327230|ref|ZP_21055860.1| ribokinase [Xenococcus sp. PCC 7305]
gi|442793169|gb|ELS02626.1| ribokinase [Xenococcus sp. PCC 7305]
Length = 310
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 157/306 (51%), Gaps = 5/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ VE+ LP GETV GGK ANQA AKL P Y +G+VG
Sbjct: 3 VVVFGSINLDLVVEVPHLPTRGETVIGNRFFCATGGKAANQAVAVAKLGVPVYSIGRVGS 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ + L GV D V D +G A +++ G N+I G N +
Sbjct: 63 DNFGQVLLENLQLAGV--DTTGVTIDSQSHSGVASIVVDQRGDNAIACAAGANNLVRETE 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ +A ++L++ IP ++ + A+S+ P+I D + +P+EL +D
Sbjct: 121 LKAFE-KIIPQAKVILIELGIPLPTVMEALRRAKSSNCPIILDPAPARSSLPEELYKLVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE E +L G D +A H+MG ++V++ LG++G A GE+
Sbjct: 180 IITPNEIEASQLVGFTVDGITTARQAASFLHQMGAKKVIITLGSQG-AFCSTGEEDFWLK 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
IP +V+DT AGD F + + GKS +E + + A +L V GA PS+P R
Sbjct: 239 PIP-VKVVDTVAAGDAFNGALSAAIAAGKSFKEAVIWGNVAGALAVTKPGAQPSLPTRDC 297
Query: 370 VLNLLQ 375
+ LL+
Sbjct: 298 FMELLE 303
>gi|238854958|ref|ZP_04645288.1| ribokinase [Lactobacillus jensenii 269-3]
gi|260664243|ref|ZP_05865096.1| ribokinase [Lactobacillus jensenii SJ-7A-US]
gi|313472439|ref|ZP_07812931.1| ribokinase [Lactobacillus jensenii 1153]
gi|238832748|gb|EEQ25055.1| ribokinase [Lactobacillus jensenii 269-3]
gi|239529683|gb|EEQ68684.1| ribokinase [Lactobacillus jensenii 1153]
gi|260562129|gb|EEX28098.1| ribokinase [Lactobacillus jensenii SJ-7A-US]
Length = 307
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 161/313 (51%), Gaps = 20/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS+N D + + PK GET+ A GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVVGSSNVDTTLHVVDFPKPGETINALDITEAGGGKGANQAIAAAKAGSETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D++G+ I L GV Y+ G TGHA + L GQN+III G N E
Sbjct: 64 DSSGRFILKQLKCYGVDTTYVQTTS--GTNTGHAYINLNEAGQNNIIIDHGANYELSVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D E++K + ++ Q E P V I+ K A+ V I + +P+ELL D
Sbjct: 122 I-DAAEELIKDSDAIITQFETPIEVAIEAFKIAKKNNVITILNPAPAIKELPKELLKLTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ E I K H++GV+ V++ G KGS + +
Sbjct: 181 LIAPNETESSLITGIEVKDLESIKANSDKLHELGVKNVVITYGDKGSYISTAN----VEK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR------EECLRFAAAAASLCVQVKGAI 361
+IPA +V DTTGAGDTF +GF+ + + E+ FAA A+S+ V GA
Sbjct: 237 LIPAFKVEAADTTGAGDTF-----IGFLTSQLQADFSNIEQAATFAARASSIAVSRLGAQ 291
Query: 362 PSMPDRKSVLNLL 374
PS+P V L+
Sbjct: 292 PSIPTYNEVNELM 304
>gi|23499772|ref|NP_699212.1| ribokinase [Brucella suis 1330]
gi|161620099|ref|YP_001593985.1| ribokinase [Brucella canis ATCC 23365]
gi|163844204|ref|YP_001621859.1| ribokinase [Brucella suis ATCC 23445]
gi|225628492|ref|ZP_03786526.1| ribokinase [Brucella ceti str. Cudo]
gi|256014800|ref|YP_003104809.1| ribokinase [Brucella microti CCM 4915]
gi|260568650|ref|ZP_05839119.1| ribokinase [Brucella suis bv. 4 str. 40]
gi|261216644|ref|ZP_05930925.1| ribokinase [Brucella ceti M13/05/1]
gi|261313881|ref|ZP_05953078.1| ribokinase [Brucella pinnipedialis M163/99/10]
gi|261318878|ref|ZP_05958075.1| ribokinase [Brucella pinnipedialis B2/94]
gi|261319513|ref|ZP_05958710.1| ribokinase [Brucella ceti M644/93/1]
gi|261749770|ref|ZP_05993479.1| ribokinase [Brucella suis bv. 5 str. 513]
gi|261756239|ref|ZP_05999948.1| ribokinase [Brucella sp. F5/99]
gi|265987119|ref|ZP_06099676.1| ribokinase [Brucella pinnipedialis M292/94/1]
gi|340791772|ref|YP_004757236.1| ribokinase [Brucella pinnipedialis B2/94]
gi|376277996|ref|YP_005108029.1| ribokinase, putative [Brucella suis VBI22]
gi|384222558|ref|YP_005613723.1| ribokinase [Brucella suis 1330]
gi|23463336|gb|AAN33217.1| ribokinase, putative [Brucella suis 1330]
gi|161336910|gb|ABX63214.1| ribokinase [Brucella canis ATCC 23365]
gi|163674927|gb|ABY39037.1| ribokinase [Brucella suis ATCC 23445]
gi|225616338|gb|EEH13386.1| ribokinase [Brucella ceti str. Cudo]
gi|255997460|gb|ACU49147.1| ribokinase, putative [Brucella microti CCM 4915]
gi|260155315|gb|EEW90396.1| ribokinase [Brucella suis bv. 4 str. 40]
gi|260921733|gb|EEX88301.1| ribokinase [Brucella ceti M13/05/1]
gi|261292203|gb|EEX95699.1| ribokinase [Brucella ceti M644/93/1]
gi|261298101|gb|EEY01598.1| ribokinase [Brucella pinnipedialis B2/94]
gi|261302907|gb|EEY06404.1| ribokinase [Brucella pinnipedialis M163/99/10]
gi|261736223|gb|EEY24219.1| ribokinase [Brucella sp. F5/99]
gi|261739523|gb|EEY27449.1| ribokinase [Brucella suis bv. 5 str. 513]
gi|264659316|gb|EEZ29577.1| ribokinase [Brucella pinnipedialis M292/94/1]
gi|340560231|gb|AEK55468.1| ribokinase [Brucella pinnipedialis B2/94]
gi|343384006|gb|AEM19497.1| ribokinase, putative [Brucella suis 1330]
gi|358259434|gb|AEU07167.1| ribokinase, putative [Brucella suis VBI22]
Length = 313
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 162/312 (51%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|359779458|ref|ZP_09282685.1| ribokinase [Pseudomonas psychrotolerans L19]
gi|359372074|gb|EHK72638.1| ribokinase [Pseudomonas psychrotolerans L19]
Length = 302
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 156/304 (51%), Gaps = 7/304 (2%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VV+GS N D+ V RLPK GET+A T T GGKGANQA A+L +G V
Sbjct: 3 PDVVVIGSLNMDLVVRTPRLPKGGETLAGHTFTTAPGGKGANQAVAAARLGARVAMIGCV 62
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G +T +L G+ ++V + VPTG A +++ GQN+I+IV G N
Sbjct: 63 GADPYGDFLTRSLLQEGIDCQGVSVAAE--VPTGIASILVDDQGQNAIVIVAGGNGELSA 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
++ V+ +A +V+ Q E+P +V +A+ A + G VI + P+P E
Sbjct: 121 AHLQAQE-SVLDQAKLVIAQLEVPLATVGAALAR-AHALGKTVILNPAPATGPLPAEWYA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+P D+ EQ A + G +QVL+ L L V +
Sbjct: 179 HIDYLVPNESEASLLTGLPVDTLEQAEAAARQLVAAGARQVLLTL-GGQGLLQVSADGCQ 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
P + +DTT AGDTF FA G EG S + AA++ V GA PS+P
Sbjct: 238 HHPATP-VKAVDTTAAGDTFLGGFAAGLAEGLSVSAAIALGQQAAAIAVTRPGAQPSIPT 296
Query: 367 RKSV 370
R+ +
Sbjct: 297 RQEL 300
>gi|378696703|ref|YP_005178661.1| ribokinase [Haemophilus influenzae 10810]
gi|301169222|emb|CBW28819.1| ribokinase [Haemophilus influenzae 10810]
Length = 306
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 162/311 (52%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L ++GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTILGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A + G+ ++N V TG A + + G+NSI++ G N S E
Sbjct: 65 DSIGKTMKNAFAQEGIDTTHINTVSQE--MTGMAFIQVAQSGENSIVLTSGAN-SHLNEI 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGIAVTDEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLKFLEHA 306
>gi|154687709|ref|YP_001422870.1| hypothetical protein RBAM_033090 [Bacillus amyloliquefaciens FZB42]
gi|154353560|gb|ABS75639.1| RbsK [Bacillus amyloliquefaciens FZB42]
Length = 293
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 156/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V +R PK GETV QT+ GGKGANQA ++L Y VG+ G
Sbjct: 4 ICVIGSCSMDLVVTSERRPKAGETVLGTDFQTVPGGKGANQAVAASRLGANVYMVGKAGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV D+M V T H V+ ++G NSI++V G N P+
Sbjct: 64 DSYGKAIIENLKANGVNTDHMETVTHKKSGTAHIVL---AEGDNSIVVVKGANDDISPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ L + IVL+Q+EIP+ +V R+ +PVI + P+ Q +
Sbjct: 120 YAKSALAKLPGIDIVLIQQEIPEETVEEVCSYCRAQQIPVILNPAPAR-PLKQSTIEDAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+IPA A +DTTGAGDTF A+ AV EG+ E+ L FA AASL VQ GA
Sbjct: 220 DGTAERLIPAFPAEAVDTTGAGDTFNAALAVALAEGRDIEQALLFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPARKEVEELL 292
>gi|258507368|ref|YP_003170119.1| ribokinase [Lactobacillus rhamnosus GG]
gi|385827082|ref|YP_005864854.1| ribokinase [Lactobacillus rhamnosus GG]
gi|257147295|emb|CAR86268.1| Ribokinase [Lactobacillus rhamnosus GG]
gi|259648727|dbj|BAI40889.1| ribokinase [Lactobacillus rhamnosus GG]
Length = 313
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 160/302 (52%), Gaps = 10/302 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D + I RLP+ GET+ AGG+GANQA A+ T F+G+
Sbjct: 2 PNHVVVIGSINVDAILHIQRLPQPGETIQMDAFSKAAGGEGANQAVAAARSGAKTSFIGR 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DAN + L + Y+ D TG A ++LQ+ GQNSIII G N
Sbjct: 62 VGDDANAAFMRGELVKNQIDTQYVATTAD--TETGQAYILLQASGQNSIIIQHGANFELT 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P +++ A V+ + E P + + K A++A I + +P+ LL
Sbjct: 120 PADV-QRATGLIQSADFVVAELETPVAATAEAFKIAKAADKVTILNPAPAQKDLPEALLK 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +TG+P + ++ H++G++ V++ LG+KGS + ++G+
Sbjct: 179 NVDLIAPNETESELITGIPVTDEASMRQSAAYYHQLGIRGVVITLGSKGSFISLDGQA-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPS 363
+++PA +V +DTT AGDTF + + + + +A+ A+S VQ GA PS
Sbjct: 237 --TLVPAFKVKAVDTTAAGDTFIGALVSNLQPDLGNIVDAETYASMASSFTVQKLGAFPS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|340757327|ref|ZP_08693929.1| ribokinase [Fusobacterium varium ATCC 27725]
gi|251834591|gb|EES63154.1| ribokinase [Fusobacterium varium ATCC 27725]
Length = 307
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 167/310 (53%), Gaps = 20/310 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ +R PK GET+ K + GGKGANQA KL +G++G
Sbjct: 4 VVVAGSINMDLVTVCERAPKGGETLFGKEFFQVPGGKGANQAVAIGKLGTQVTMLGKIGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + ++ GV +Y +++ TG A ++++++GQN I++V G NM
Sbjct: 64 DSFGKDLVASMKNSGVNTEY---IENSASSTGIAKIIVEANGQNRILVVSGANMDV-DRA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---ELLN 246
+ D +EV+ + I++ Q EIP V K A+ AG I + AP Q E++
Sbjct: 120 YIDRHIEVINNSDILVTQLEIPIDTVEYVLKKAKEAGKITILNP----APAAQLNDEIIK 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
DI+ PNESELG +TGMPT++ +I A K MGV++++V LG++GS +
Sbjct: 176 NSDIIIPNESELGIITGMPTNTLNEIEAAAQKLLNMGVKELIVTLGSQGSLHLNK----- 230
Query: 307 KQSIIPAA---RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
K S I +A +DTT AGD+F V ++ + +E + FA +++ V KGA S
Sbjct: 231 KGSTIHSAYKVNAVDTTAAGDSFIGGL-VKNIQDDNLDEAIEFATKVSAITVTRKGAQIS 289
Query: 364 MPDRKSVLNL 373
+P + V N
Sbjct: 290 IPTIEEVENF 299
>gi|307729888|ref|YP_003907112.1| ribokinase [Burkholderia sp. CCGE1003]
gi|307584423|gb|ADN57821.1| ribokinase [Burkholderia sp. CCGE1003]
Length = 307
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 148/301 (49%), Gaps = 5/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ RLP GET+A +T + GGKG NQA A+L +G VG
Sbjct: 10 VAVVGSLNMDLVARAPRLPHPGETLAGRTFAQVPGGKGGNQAVAAARLGARVAMLGCVGA 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG + L G+ + ++ TG A++++ QN+I+IV G+N P+
Sbjct: 70 DANGAQLRAGLEAEGIDCTALETGREA---TGVALIVVDDASQNAIVIVAGSNGEVTPDT 126
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ V+ A +V+ Q E P AAR G VI + P+P E L ID
Sbjct: 127 IARHE-AVLAAADVVICQLETPLDTVHAALAAARRLGKTVILNPAPATGPLPAEWLPLID 185
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P S E+ + A G + VLV LG +G +EG P+
Sbjct: 186 YLIPNELEAAALTGLPVGSPEEAATAAAVLRAAGARNVLVTLGPRGVQAALEGAAPVLYD 245
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P +DTT AGDTF FA EG + +RFA AA+L V GA PS+P R
Sbjct: 246 -APKVEAVDTTAAGDTFIGGFAAQLGEGAGVDAAIRFAQRAAALSVTRAGAQPSIPTRAE 304
Query: 370 V 370
+
Sbjct: 305 L 305
>gi|184156214|ref|YP_001844554.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|227515244|ref|ZP_03945293.1| ribokinase [Lactobacillus fermentum ATCC 14931]
gi|385812772|ref|YP_005849163.1| ribokinase [Lactobacillus fermentum CECT 5716]
gi|183227558|dbj|BAG28074.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|227086389|gb|EEI21701.1| ribokinase [Lactobacillus fermentum ATCC 14931]
gi|299783669|gb|ADJ41667.1| Ribokinase [Lactobacillus fermentum CECT 5716]
Length = 305
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 157/309 (50%), Gaps = 11/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + R P+ GET+AA + GGKGANQA + TYF+G VG
Sbjct: 5 VAVLGSINVDTTYHVHRFPEPGETLAATDKSSAPGGKGANQAVAAVRSGSETYFIGMVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + DAL +D NV D TG A+V L +GQN I++ GG N + +
Sbjct: 65 DSEGKFMRDALQED--HIDTTNVGNDPRHGTGTALVTLDENGQNDIMVYGGANQAMTKDV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ EV+KK ++ Q E P +V ++ K A++ GV + + +P ELL + D
Sbjct: 123 LSKSE-EVMKKVDFLITQFETPQTVALEAFKMAKANGVITVLNPAPATEILP-ELLEYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ + + GV LV LG+KG+ +
Sbjct: 181 IIAPNETESALLTGIEITDDASLDQTAEYFRAKGVGVTLVTLGSKGAYYSTKD----GSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+PA +V IDTT AGDTF + + S + + +A A+SL VQ GA+PS+P
Sbjct: 237 TVPAFKVKAIDTTAAGDTFIGALISQLLPDFSNLADAITYAQRASSLTVQGMGAMPSIPT 296
Query: 367 RKSVLNLLQ 375
V L+
Sbjct: 297 FDQVQEALK 305
>gi|325276820|ref|ZP_08142521.1| ribokinase [Pseudomonas sp. TJI-51]
gi|324098058|gb|EGB96203.1| ribokinase [Pseudomonas sp. TJI-51]
Length = 302
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 151/297 (50%), Gaps = 7/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLP+ GET+ + T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVVRAQRLPRAGETLPGERFFTVPGGKGANQAVAAARLGASVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + ALS G+ D V GV +G A++ + + QN I+++ G N P+
Sbjct: 65 DDYGRQLHQALSAEGI--DCQGVSTCPGVSSGVALITVDAASQNCIVVIPGGNGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ A +V+ Q E+P K A G VI + P+P + FID
Sbjct: 123 VQHFE-ALLQAAQVVICQLEVPVETVAWTLKRAHDLGKQVILNPAPATGPLPAQWFAFID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPIKQ 308
L+PNESE LTG+ A + + G +V+V LGA+G+ L EG +
Sbjct: 182 YLTPNESEAEALTGIAVTDQASAQLAAERLLQAGAGKVIVTLGAQGALLVTPEGH---QH 238
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 239 YPAPVVQPLDTTAAGDTFIGGFAAGLVRGLEEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|260582232|ref|ZP_05850025.1| ribokinase [Haemophilus influenzae NT127]
gi|260094600|gb|EEW78495.1| ribokinase [Haemophilus influenzae NT127]
Length = 307
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L ++GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 6 LTILGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A G+ ++N V TG A + + G+NSI++ G N S E
Sbjct: 66 DSIGKTMKNAFEQEGIDTTHINTVSQE--MTGMAFIQVAQSGENSIVLASGAN-SHLSEM 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 123 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 179 LIDIITPNETEAEILTGVAVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 239 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 296
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 297 RQETLEFLEHA 307
>gi|145640480|ref|ZP_01796064.1| ribokinase [Haemophilus influenzae R3021]
gi|145275066|gb|EDK14928.1| ribokinase [Haemophilus influenzae 22.4-21]
Length = 306
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + +A S G+ D N+ TG A + + G+NSI++ G N + EK
Sbjct: 65 DSIGETMKNAFSQEGI--DTTNIHSISQEMTGMAFIQVAQSGENSIVLARGAN-AHLDEK 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 LVQHSEAKIAQSNYLLMQLETPISGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHYKGIETVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|261753013|ref|ZP_05996722.1| ribokinase [Brucella suis bv. 3 str. 686]
gi|261742766|gb|EEY30692.1| ribokinase [Brucella suis bv. 3 str. 686]
Length = 313
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 IGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|440747635|ref|ZP_20926891.1| Ribokinase [Mariniradius saccharolyticus AK6]
gi|436483811|gb|ELP39839.1| Ribokinase [Mariniradius saccharolyticus AK6]
Length = 310
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 30/310 (9%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P ++V+GS+N D+ ++ D P+ GET+ ++GGKGANQA A+L F+ QV
Sbjct: 14 PKILVIGSSNMDLVIQADHFPRPGETLIGGNFSMISGGKGANQAVAAARLGGEVVFLAQV 73
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G++ ++ G+ D + ++ +P+G A++ + G+N+II+ G N
Sbjct: 74 GNDPFGQVNLESYEREGI--DTSLIERNPDLPSGVALITVSESGENTIIVAPGANAGM-- 129
Query: 188 EKFGDEDLEVVKKAG-------IVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP- 239
D++ +KKA +VLLQ EIP V + A+ A++ G VI + AP
Sbjct: 130 ------DVDNLKKAASKFAWADVVLLQLEIPLEVVTEAARMAKAQGKKVILNP----APA 179
Query: 240 --IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
+P ELL +DI++PNE+E LTG+ + A + + G+Q+V++ LG G A
Sbjct: 180 RSLPAELLENVDIITPNETEAEFLTGISVSDISSAALAAARFNASGIQKVIITLGENG-A 238
Query: 298 LFVEGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCV 355
+G + IIP RV +DTT AGDTF + AV G++ + FA AA+L V
Sbjct: 239 FLADGN---TEEIIPTQRVKAVDTTAAGDTFNGALAVALGRGENMNAAVTFALKAATLSV 295
Query: 356 QVKGAIPSMP 365
Q GA S+P
Sbjct: 296 QRLGAQTSIP 305
>gi|323142361|ref|ZP_08077193.1| ribokinase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413245|gb|EFY04132.1| ribokinase [Phascolarctobacterium succinatutens YIT 12067]
Length = 293
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 159/308 (51%), Gaps = 20/308 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N DI VE DR GET+ GGKGANQA A+L VG +G+
Sbjct: 4 IVVVGSCNIDITVECDRWVHPGETIFGNRLTVSPGGKGANQAVAAARLGADVMMVGCIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+L+ AL V Y+ V+ T H V ++ N+II++ N P
Sbjct: 64 DVYGQLVLKALKENNVDSTYVKVLPGENSGTAHITV---AEDDNTIIVIKAANDLVSPSL 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE E + KA +VLLQ EIP + N V + + GVPV+ + + AP+PQ LL+ I
Sbjct: 121 I-DEAWEDISKADMVLLQHEIPAATNAYVIEKCAAHGVPVLLNPAPV-APVPQALLDKIT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L + +A + G +V++ LG+KG A +G+
Sbjct: 179 YLTPNEHEAATL-------FAGKGKADILDQNQG--KVIMTLGSKGVAYAEKGQ----VI 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+P +V +DTTGAGDTF +FAV GKS +E + FA AAA+L VQ GA MP
Sbjct: 226 TVPGFKVKPVDTTGAGDTFNGAFAVARANGKSMQESISFANAAAALSVQKLGAQGGMPYL 285
Query: 368 KSVLNLLQ 375
V +L+
Sbjct: 286 HEVEEMLK 293
>gi|429506889|ref|YP_007188073.1| hypothetical protein B938_17005 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429488479|gb|AFZ92403.1| hypothetical protein B938_17005 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 293
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 156/313 (49%), Gaps = 32/313 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS + D+ V +R PKVGETV QT+ GGKGANQA ++L Y VG+ G
Sbjct: 4 ICVIGSCSMDLVVTSERRPKVGETVLGTDFQTVPGGKGANQAVAASRLGANVYMVGKAGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV D+M V T H V+ ++G NSI++V G N P+
Sbjct: 64 DSYGKAIIENLKANGVNTDHMETVTHKKSGTAHIVL---AEGDNSIVVVKGANDDISPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ L + IVL+Q+EIP+ V R+ +PVI + P+ Q +
Sbjct: 120 YAKSALAKLPGIDIVLIQQEIPEETVEAVCSYCRAQQIPVILNPAPAR-PLKQSTIEDAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P + E EA+ G G EG++ ++ S
Sbjct: 179 YLTPNEHEASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYS 219
Query: 310 ------IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA A +DTTGAGDTF A+ AV EG+ E+ L FA AASL VQ GA
Sbjct: 220 DGTAERLVPAFPAEAVDTTGAGDTFNAALAVALAEGRDIEQALLFANRAASLSVQHFGAQ 279
Query: 362 PSMPDRKSVLNLL 374
MP RK V LL
Sbjct: 280 GGMPARKEVEELL 292
>gi|404366695|ref|ZP_10972077.1| ribokinase [Fusobacterium ulcerans ATCC 49185]
gi|313689537|gb|EFS26372.1| ribokinase [Fusobacterium ulcerans ATCC 49185]
Length = 307
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 170/308 (55%), Gaps = 16/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ +R PK GET+ K + GGKGANQA KL +G++G
Sbjct: 4 VVVAGSINMDLVTICERAPKGGETLFGKEFFQVPGGKGANQAVAIGKLGTQVTMLGKIGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +++ V Y ++ TG A ++++ +GQN I++V G NM
Sbjct: 64 DSFGKDLISSMNNSRVDTKY---IETSASSTGIAKIIVEENGQNRILVVSGANMDV-DRA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D ++++ +A I++ Q EIP D+V + KA + AG I + AP+ E++
Sbjct: 120 YIDRHMDIINEADILVTQLEIPMDTVEYALKKA-KEAGKTTILNPAPA-APLNDEIIRNS 177
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNESELG +TGMPT++ E+I A K MGV++++V LG++GS + K
Sbjct: 178 DIIIPNESELGIITGMPTNTLEEIEAAAHKLLNMGVKELIVTLGSQGSLHLNK-----KG 232
Query: 309 SIIPAA---RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
S++ A + +DTT AGD+F V ++ + +E + FA +++ V KGA S+P
Sbjct: 233 SVMHTAYKVKAVDTTAAGDSFIGGL-VRNIQADNLDETIEFATKVSAITVTRKGAQISIP 291
Query: 366 DRKSVLNL 373
+ V N
Sbjct: 292 TIEEVENF 299
>gi|347534002|ref|YP_004840672.1| ribokinase [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504058|gb|AEN98740.1| Ribokinase [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 540
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 165/312 (52%), Gaps = 18/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKT-SQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VVVGS N D + +++ GET+A T Q+ GGKGANQA A+ T F+ ++G
Sbjct: 4 IVVVGSTNVDKVLNVEKYALPGETLAINTYQQSHGGGKGANQAIAAARSGADTTFITKLG 63
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D + K++ G+ +D +V+ TG A + + GQNSI + GG NM+ P
Sbjct: 64 NDEDAKMMVKGFKADGMNID--DVITTTDQETGKAYITVDKSGQNSIYVYGGANMAMTPT 121
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
D + A V+ Q EIP I+ K A+ GV I + AP +P+ELL
Sbjct: 122 DV-DAHKSAIINADRVIAQLEIPVPAVIEAFKIAKEHGVQTILNP----APAKELPEELL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI++PNESE LTG+ + + G++ V++ +G +GS P
Sbjct: 177 KLTDIITPNESEAATLTGIEVKDETSMLANAKFFFERGIKMVIITVGGRGSFF----ATP 232
Query: 306 IKQSIIP--AARVIDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIP 362
++IP A+V+DTT AGDTFT S A ++ + + + +A+ A+SL +QV GA
Sbjct: 233 DDHALIPPFPAKVVDTTAAGDTFTGSLASQLEIDLSNIRKAMLYASHASSLTIQVAGAQN 292
Query: 363 SMPDRKSVLNLL 374
S+P R+++LN++
Sbjct: 293 SIPTREAILNVI 304
>gi|260757172|ref|ZP_05869520.1| ribokinase [Brucella abortus bv. 6 str. 870]
gi|260677280|gb|EEX64101.1| ribokinase [Brucella abortus bv. 6 str. 870]
Length = 313
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 163/312 (52%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAK+ R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKSVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+++AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|376270554|ref|YP_005113599.1| ribokinase [Brucella abortus A13334]
gi|363401726|gb|AEW18695.1| ribokinase [Brucella abortus A13334]
Length = 306
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 162/309 (52%), Gaps = 6/309 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG VG
Sbjct: 3 IFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGH 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 63 DAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARWSSA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELLNFI 248
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 120 DIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLIALS 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E +K
Sbjct: 180 DIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLITADE--VKH 237
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+V+DT AGD+F FAV F + + +C+R+++AA ++ V GA + P +
Sbjct: 238 FTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYSSAAGAIAVTRVGAGAAAPTAR 297
Query: 369 SVLNLLQYA 377
V L+ A
Sbjct: 298 EVEELIGRA 306
>gi|425898655|ref|ZP_18875246.1| ribokinase [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397892607|gb|EJL09085.1| ribokinase [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 305
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 157/304 (51%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ +RLP+ GET+ ++ T++GGKGANQA A+L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRAERLPRAGETLIGQSFATVSGGKGANQAVAAARLGAQVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DA G+ + AL R+D V G +G A++++ QN+I+IV G N
Sbjct: 62 VGDDAYGEQLRSAL--LAERIDCQAVTAVAG-SSGVALIVVDDSSQNAIVIVAGGNGQLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
PE D +V++ A +++ Q E+P K R G VI + P+P +
Sbjct: 119 PEVVIGFD-KVLRAADVIICQLEVPLPTVGHSLKRGRELGKTVILNPAPASGPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + G +V++ LGA+GS LF G
Sbjct: 178 SIDYLIPNESEAAALSGLPVDSLASAEAAAARLIAAGAGKVIITLGAQGS-LFANGTS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA G+S E +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPKVKAVDTTAAGDTFVGGFAAALAAGRSEAEAIRFGQVAAALSVTRPGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|387929108|ref|ZP_10131785.1| ribokinase [Bacillus methanolicus PB1]
gi|387585926|gb|EIJ78250.1| ribokinase [Bacillus methanolicus PB1]
Length = 301
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 162/311 (52%), Gaps = 17/311 (5%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T + V+GS N D+ + ++P++GETV + T+ GGKGANQA A+L +G
Sbjct: 2 TRKRITVIGSINMDLVTKTRKIPRIGETVLGDSFYTIPGGKGANQAVAAARLGADVTLIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG+DA GK + LS G+ +DY+ V TG A + + SDG NSII+V G N
Sbjct: 62 CVGQDAFGKELVKHLSIQGIHMDYVRPVLHQ--STGFASITI-SDGDNSIIVVPGANYQV 118
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
PE F +E V+ K+ IVLLQ EIP + + A+ V VI + + A + +EL+
Sbjct: 119 TPE-FVEEHESVIAKSDIVLLQLEIPLKSVEKAVEIAKKHNVKVILNPAPIQA-LSKELV 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQ-ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
ID L+PNE E L + EQ + + KC +V G+KG +F G K
Sbjct: 177 QKIDYLTPNEHEQQELLSSAFEWSEQEKKDLMAKC--------IVTRGSKGVKIFQNGGK 228
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I + V+DTTGAGDTF + A G EE RFA AAA+L V GA M
Sbjct: 229 EISGYKV---EVVDTTGAGDTFNGALAFSLSFGMELEEACRFANAAAALSVSKLGAQGGM 285
Query: 365 PDRKSVLNLLQ 375
P ++ V L+
Sbjct: 286 PTKQEVDEFLE 296
>gi|309789954|ref|ZP_07684530.1| ribokinase [Oscillochloris trichoides DG-6]
gi|308227974|gb|EFO81626.1| ribokinase [Oscillochloris trichoides DG6]
Length = 320
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/314 (37%), Positives = 165/314 (52%), Gaps = 21/314 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLPK GET+ T GGKGANQA A+L T +G+VG
Sbjct: 2 IVVVGSLNMDLVVRSPRLPKPGETLRGGPFATYPGGKGANQAVAAARLGAKTAIIGRVGA 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ A GV ++ V+ + TG +++ ++ GQN+I+I G N + P
Sbjct: 62 DGFGQMLRIAAEVDGVNVE--QVLDTPTMATGVSLITVEDGGQNTIVIASGANATLTP-- 117
Query: 190 FGDEDLEV----VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDA-PIPQEL 244
ED+EV + A +VLLQ E+P I+ A+ AR G VI + A +P +L
Sbjct: 118 ---EDVEVAGSLIASARVVLLQLEVPLPAVIRAAELAREVGATVILNPAPAPAGRLPAKL 174
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQ-ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
L+ ID L PNESE G P+ + + ++ A+ GV ++ LG G A+
Sbjct: 175 LSMIDYLVPNESEAGAFLDEPSSAPPKGLARALAAVT--GVPNAIITLGEAG-AVMASPS 231
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
I Q PA RV +D+T AGD F A FAV EG + + LR+ AA +L GA
Sbjct: 232 GAIHQ---PAFRVQAVDSTAAGDAFVAGFAVALSEGLAPTKALRWGCAAGALAATRLGAQ 288
Query: 362 PSMPDRKSVLNLLQ 375
S+P R VL LL+
Sbjct: 289 ASLPRRDEVLALLR 302
>gi|145634497|ref|ZP_01790206.1| ribokinase [Haemophilus influenzae PittAA]
gi|145268042|gb|EDK08037.1| ribokinase [Haemophilus influenzae PittAA]
Length = 307
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 160/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ Q + GGKG NQA A+L F+G VG
Sbjct: 6 LTVLGSINADHVISVPYFSKPGETLTGDNYQLVYGGKGGNQAVAAARLGANVEFIGCVGS 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +A S G+ D N+ TG A + + G+NSI++ G N + EK
Sbjct: 66 DVIGETMKNAFSQEGI--DTTNIHSISQEMTGMAFIQVAQSGENSIVLARGAN-AHLDEK 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 123 LVQHSEAKIAQSNYLLMQLETPISGVELAAQIAKKNGVKVVLNP----APAQILSDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 179 LIDIITPNETEAEILTGVAVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 239 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 296
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 297 RQETLEFLEHA 307
>gi|261219877|ref|ZP_05934158.1| ribokinase [Brucella ceti B1/94]
gi|265996781|ref|ZP_06109338.1| ribokinase [Brucella ceti M490/95/1]
gi|260918461|gb|EEX85114.1| ribokinase [Brucella ceti B1/94]
gi|262551078|gb|EEZ07239.1| ribokinase [Brucella ceti M490/95/1]
Length = 313
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 162/312 (51%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D++SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDVISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|237665474|ref|ZP_04525462.1| ribokinase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|237658421|gb|EEP55973.1| ribokinase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 305
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 168/309 (54%), Gaps = 16/309 (5%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
++GS N D+ V +D +P+VGET+ ++ + GGKGANQA ++ + + + ++G+DA
Sbjct: 6 IIGSINMDMIVSVDEMPQVGETIISENFKLAHGGKGANQAVAAKRMGNEVHMISKIGKDA 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
G I ++L + D V +D PTG A++ + DG NSI+++ G NM+ +K+
Sbjct: 66 YGYEILESLKNENI--DVSKVFQDKCKPTGTAIITVNKDGNNSIVVIPGANMAI--DKYE 121
Query: 192 DEDL-EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
E +++ + IV+ Q E I+ K A+ V I + + IP ELL + DI
Sbjct: 122 IESCKDIIINSDIVVAQFETTLDATIEAFKIAKENHVITILNPAPAN-KIPDELLKYTDI 180
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
+ PNE+E LTG+ + E + +A GV+ ++ LG KG+AL V E+ + I
Sbjct: 181 IIPNETEAATLTGIEVTNLEDVEKAAKSFLSKGVKYSIITLGEKGAAL-VSNERSV---I 236
Query: 311 IPAARV--IDTTGAGDTFTASFAVGF----VEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+PA +V +DTT AGD+F + + V + E ++F +S+ VQ +GA PS+
Sbjct: 237 VPAYKVKAVDTTAAGDSFIGALSAKLDKKNVNFDTLIEAVKFGNKVSSIVVQKEGAQPSI 296
Query: 365 PDRKSVLNL 373
P + N+
Sbjct: 297 PFINDIENI 305
>gi|260662444|ref|ZP_05863339.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
gi|260553135|gb|EEX26078.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
Length = 305
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 11/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + R P+ GET+AA + GGKGANQA + TYF+G VG
Sbjct: 5 VAVLGSINVDTTYHVHRFPEPGETLAATDKSSAPGGKGANQAVAAVRSGSETYFIGMVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + DAL +D NV D TG A+V L +GQN I++ GG N + +
Sbjct: 65 DSEGKFMRDALQED--HIDTTNVGNDPRHGTGTALVTLDENGQNDIMVYGGANQAMTKDV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ EV+KK ++ Q E P +V ++ K A++ GV + + +P ELL + D
Sbjct: 123 LSKSE-EVMKKVDFLITQFETPQTVALEAFKMAKANGVITVLNPAPATEILP-ELLEYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ + + GV LV LG+KG+ +
Sbjct: 181 IIAPNETESALLTGIEITDDASLDQTAEYFRAKGVGVTLVTLGSKGAYYSTKD----GSG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+PA +V IDTT AGDTF + + S + + +A A+S+ VQ GA+PS+P
Sbjct: 237 TVPAFKVKAIDTTAAGDTFIGALISQLLPDFSNLADAITYAQRASSMTVQGMGAMPSIPT 296
Query: 367 RKSVLNLLQ 375
V L+
Sbjct: 297 FDQVQEALK 305
>gi|338813730|ref|ZP_08625822.1| ribokinase [Acetonema longum DSM 6540]
gi|337274298|gb|EGO62843.1| ribokinase [Acetonema longum DSM 6540]
Length = 310
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 167/315 (53%), Gaps = 13/315 (4%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T ++V+GS N D+ V + +LP GETV + T GGKGANQA +L G
Sbjct: 2 TTKTVLVIGSLNMDLAVSVQKLPHQGETVFGSSFATFPGGKGANQAVAAGRLGAAVKMAG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG D G + + L V + V TG A++ + + G N+I++VGG N +C
Sbjct: 62 CVGRDGFGADLLEGLQASHVDRTCVEQVDQ---STGTALITVDAAGANTIVVVGGANWAC 118
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
D+ L + GI++LQ EIP KAA++ G VIF+ AP + +
Sbjct: 119 DAAAV-DKALTAAGEPGILVLQNEIPQETVEYAIKAAKAQGWTVIFNP----APARTLSR 173
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
+++ +DI+ PNE+E LTG+P DS E + +A K G+ V++ LGA+GS L G
Sbjct: 174 DIMPLVDIIIPNETETAVLTGLPADSDEAVIKAARKLLDQGIGTVVITLGARGS-LCCSG 232
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+ + P + +DTT AGD + + A G EG+S + L FA+AAA++ V GA P
Sbjct: 233 AEQYRIQPYP-VKAVDTTAAGDAYVGAMATGLAEGRSLRDSLEFASAAAAVAVTRAGAQP 291
Query: 363 SMPDRKSVLNLLQYA 377
S+P RK V ++ A
Sbjct: 292 SLPWRKEVDAFIRKA 306
>gi|259502832|ref|ZP_05745734.1| ribokinase [Lactobacillus antri DSM 16041]
gi|259169199|gb|EEW53694.1| ribokinase [Lactobacillus antri DSM 16041]
Length = 305
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 166/308 (53%), Gaps = 17/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D + I R+P GET+AA+ + AGGKGANQA A+ T F+G+VG+
Sbjct: 4 VTIVGSLNVDTTLRIKRMPLPGETLAAEGKSSAAGGKGANQAVSAARSGAQTAFIGEVGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G+++ + G+ D + ++ V TG A ++L +GQNSI+I GG N P
Sbjct: 64 DNSGQMMLSEMKANGI--DVAGIRENDQVGTGTASILLDENGQNSILIYGGANQQLSPAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + + A V+ Q E P + ++ + A+ GV I + AP I E+L
Sbjct: 122 V-EAAQDKITTADFVVAQFETPQAATLRAFQLAKENGVATILNP----APAQKIDPEVLK 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D++ PNE+E LTG+ + + K +MGV+ +++ +GAKG+ +
Sbjct: 177 LTDLIIPNETESAELTGVIITDETSMLISAAKFAQMGVRNLIITVGAKGAFYCTQD---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ IPA +V +DTT AGDTF + + S E+ L +A A+SL VQ GA+PS
Sbjct: 233 GYNFIPAFKVNAVDTTAAGDTFIGALSSQLKPDMSNIEKALVYAQRASSLAVQKMGALPS 292
Query: 364 MPDRKSVL 371
+P ++ +L
Sbjct: 293 IPTKEQIL 300
>gi|329121188|ref|ZP_08249816.1| ribokinase [Dialister micraerophilus DSM 19965]
gi|327470270|gb|EGF15731.1| ribokinase [Dialister micraerophilus DSM 19965]
Length = 303
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 158/305 (51%), Gaps = 18/305 (5%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ VE+DR P GETV GGKGANQA A+L Y +G VG DA
Sbjct: 13 VIGSCNMDLVVEVDRRPMPGETVLGNKMVLSPGGKGANQAVAAARLGAKVYMIGCVGNDA 72
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
G+++ A+ V DY+ V+ + T H V S+G+N+II++ G N S +K
Sbjct: 73 YGQMLKKAMEDSNVNTDYVYVLDNVHTGTAHITV---SNGENTIIVIKGAN-SEVSQKHI 128
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFIDI 250
+E E + + IVLLQ EI V K +PV+ + A MD +P+E + +
Sbjct: 129 EEAWETISTSDIVLLQHEISKETIDYVIKRCYEENIPVLLNPAPYMD--VPEEWIKKVKY 186
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
++PNE E + ++ + + G +V++ G +G + E I S
Sbjct: 187 ITPNEHEAALM-------FKGYTRNEILTSNNG--KVIMTAGKEG-VFYGENNSIINISG 236
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+ +DTTGAGDTF +FAV EGK+ +E +RFA AAA+L V GA MP RK V
Sbjct: 237 FD-VKAVDTTGAGDTFNGAFAVARSEGKNMKESIRFANAAAALSVTKFGAQSGMPYRKDV 295
Query: 371 LNLLQ 375
LL+
Sbjct: 296 EELLK 300
>gi|330829628|ref|YP_004392580.1| ribokinase [Aeromonas veronii B565]
gi|423209679|ref|ZP_17196233.1| ribokinase [Aeromonas veronii AER397]
gi|328804764|gb|AEB49963.1| Ribokinase [Aeromonas veronii B565]
gi|404617537|gb|EKB14473.1| ribokinase [Aeromonas veronii AER397]
Length = 310
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 160/307 (52%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L P F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAPVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMKSGFAKDGI--DVSAVELDPKLPTGIAIIYVSDEGENSIGISAEANGAITPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ A +LLQ E+P + A+ AR+ G V+ + P+ ELL +D
Sbjct: 122 VKNHE-AMIADAHTLLLQLEVPLESVHEAARLARAHGTRVVLNPAPAR-PLSAELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ EA + H+MG+ V++ LG++G V +Q
Sbjct: 180 LITPNQTEAELLTGVKVTDEASAHEAAARFHQMGIADVMITLGSQG----VYCSNAQQQQ 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVKAVDTTAAGDTFNGALLAAELAGADFHSAVRFAHGAAALSVTRFGAQSSIPSK 295
Query: 368 KSVLNLL 374
+ V L
Sbjct: 296 QEVDTFL 302
>gi|400976439|ref|ZP_10803670.1| ribokinase [Salinibacterium sp. PAMC 21357]
Length = 304
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 168/309 (54%), Gaps = 25/309 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGSAN D + ++R+P GETV + T GGKG NQA A+ T F+G VG
Sbjct: 4 IVVVGSANIDQVLRVERIPSPGETVLSHGLNTALGGKGQNQAVASARAGAETTFIGAVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+++ LS + + + + PTG A++ + G+N+II+ G N
Sbjct: 64 DSFGEMVRTGLSADSIGVSQLRTTQK---PTGTALIAVDGTGENTIIVEPGANSDVL--V 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI---PQELLN 246
D + A +++Q EIP ++ A+ A + G VI +A API PQ LL
Sbjct: 119 LTSADSAAISAASALVMQLEIPLQTVVEAARVAHAVGTRVILNA----APIQVLPQVLLE 174
Query: 247 FIDILSPNE---SELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+D+L NE +E+ + G+ T+ + E ++ V V+V G+KG++L G
Sbjct: 175 NLDVLIVNEHEAAEMAKDNGLATE-LTGLGERLLTL----VPTVIVTWGSKGASLHRVGT 229
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ ++PA RV +D TGAGDTF +FA G VEG ++ LRFA AAAS+ V+ GA+
Sbjct: 230 DEV---LVPAHRVTAVDATGAGDTFCGAFAAGLVEGMLADDALRFAVAAASISVESHGAV 286
Query: 362 PSMPDRKSV 370
PS+P R ++
Sbjct: 287 PSIPLRAAI 295
>gi|148827698|ref|YP_001292451.1| ribokinase [Haemophilus influenzae PittGG]
gi|148718940|gb|ABR00068.1| ribokinase [Haemophilus influenzae PittGG]
Length = 306
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A + G+ ++N V TG A + + G+NSI++ G N S E
Sbjct: 65 DSIGKTMKNAFAQEGIDTTHINTVSQE--MTGMAFIQVAQSGENSIVLASGAN-SHLSET 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LT + + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTAVAVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|392987705|ref|YP_006486298.1| ribokinase [Enterococcus hirae ATCC 9790]
gi|392335125|gb|AFM69407.1| ribokinase [Enterococcus hirae ATCC 9790]
Length = 302
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 162/304 (53%), Gaps = 9/304 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ K + + GGKGANQA + T+F+G +G
Sbjct: 4 VTVIGSINLDRTIRVKHMPKPGETIHTKETFSAGGGKGANQAVAARRSEATTHFIGAIGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + + L + L + +++ TG A +++ G+NSI+I G N + PE+
Sbjct: 64 DEAGKTMAELLEQEEINLQGVATLENQA--TGQAYIIVDDAGENSIMIHAGANNAFTPEQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++K+ ++ Q E I+ A+ GV I + +P+ELL D
Sbjct: 122 V-RQNKAIIEKSDFIIAQFESAVESTIEAFNLAKEVGVKTILNPAPALENVPEELLKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ E + +A H++G++ V++ +G+KG+ + K K
Sbjct: 181 MIIPNETETEILTGISITDEESLKQAAAHLHQLGIEVVIITIGSKGAFYSI---KNSKNG 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S EE + + A+SL VQ GA PS+P
Sbjct: 238 IVPAFKVNAVDTTAAGDTFIGAMSSMLATDFSNLEEAITYGNKASSLTVQRFGAQPSIPY 297
Query: 367 RKSV 370
++ +
Sbjct: 298 KQEL 301
>gi|145638578|ref|ZP_01794187.1| ribokinase [Haemophilus influenzae PittII]
gi|145272173|gb|EDK12081.1| ribokinase [Haemophilus influenzae PittII]
gi|309750082|gb|ADO80066.1| Ribokinase [Haemophilus influenzae R2866]
Length = 306
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A + G+ ++N V TG A + + G+NSI++ G N S E
Sbjct: 65 DSIGKTMKNAFAQEGIDTTHINTVSQE--MTGMAFIQVAQSGENSIVLASGAN-SHLSEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHDKGIKTVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E + F AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIHFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|354808207|ref|ZP_09041642.1| ribokinase [Lactobacillus curvatus CRL 705]
gi|354513322|gb|EHE85334.1| ribokinase [Lactobacillus curvatus CRL 705]
Length = 302
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D + + R P+ GET+A GGKGANQA + T F+ +VG+
Sbjct: 4 VIVLGSTNVDTILNVQRFPQPGETLAMDGRAVAGGGKGANQAIAAVRSGAQTAFISKVGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
+ + D G+ +D++ + G TG A +M+ + GQNSI+I GG N +
Sbjct: 64 EGAADFMLDTFKKDGMNIDHVRCSETAG--TGQAYIMVDASGQNSILIYGGANQDVTVDD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + E +K A ++ Q E+P I+ K ARS GV I + IP ELL D
Sbjct: 122 IHEAE-EAIKDADRIVAQFEVPIPAIIEAFKIARSNGVQTILNPAPAIKNIPAELLAVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E +TG+ + V KMG++ V++ +GAKGS P
Sbjct: 181 MIVPNETEAEIITGIKVTDEASMKANVEAMFKMGIKVVIITVGAKGSFY----ATPTTTG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PA +V +DTT AGDTF + + ++ + E + +A A+S+ VQ KGA S+P
Sbjct: 237 FVPAFKVQAVDTTAAGDTFIGALSTKLELDYSNIEAAMTYANKASSIAVQTKGAQNSIPY 296
Query: 367 RKSV 370
K +
Sbjct: 297 EKDI 300
>gi|145633541|ref|ZP_01789270.1| ribokinase [Haemophilus influenzae 3655]
gi|144985910|gb|EDJ92518.1| ribokinase [Haemophilus influenzae 3655]
Length = 307
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 160/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ Q + GGKG NQA A+L F+G VG
Sbjct: 6 LTVLGSINADHVISVPYFSKPGETLTGDNYQLVYGGKGGNQAVAAARLGANVEFIGCVGS 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +A S G+ D N+ TG A + + G+NSI++ G N + EK
Sbjct: 66 DVIGETMKNAFSQEGI--DTTNIHSISQEMTGMAFIQVAQSGENSIVLARGAN-AHLDEK 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 123 LVQHSEAKIAQSNYLLMQLETPISGVELAAQIAKKNGVKVVLNP----APAQILSDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 179 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E K+ +E +RF AAA++ V KGA S+P
Sbjct: 239 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKAFDEAIRFGQAAAAISVTKKGAQSSIPT 296
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 297 RQETLEFLEHA 307
>gi|452991683|emb|CCQ96980.1| Ribokinase [Clostridium ultunense Esp]
Length = 310
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 156/301 (51%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D V + +PK+GET+ A GGKGANQA A+L +G+VGE
Sbjct: 4 IVVVGSLNMDTVVSVPHIPKIGETILATDVNYYGGGKGANQAIAAARLGSKVSMIGKVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G+ + AL G+ + V KD TG A + + + G+N+I++ G N +
Sbjct: 64 DRSGQALLAALKREGIDTTGVEVSKD---ITGTAFINVSNKGENNIVVYPGANRDLGIRQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ E+++ + + +LQ EIP V V GV V+F+ I EL++
Sbjct: 121 I-ERHREIIENSKVCVLQLEIPYEVVKYVVNLCYEKGVKVVFNPAPASKEIEDELISKTH 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
IL PNE+EL L G S +++ E + + G + +++ LG KG + ++ +S
Sbjct: 180 ILIPNETELAILAGEYKYSPKKLEEIADRVYNKGCENLIITLGDKGGLYISKDKREYFES 239
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
++DTT AGD+F + G VEGK+ E + FA+ AA+L V GA S+P R
Sbjct: 240 --KKVDLVDTTAAGDSFVGALVTGIVEGKTILESIEFASFAAALTVTKPGAQNSLPIRAG 297
Query: 370 V 370
V
Sbjct: 298 V 298
>gi|392962660|ref|ZP_10328089.1| ribokinase [Pelosinus fermentans DSM 17108]
gi|421053351|ref|ZP_15516333.1| ribokinase [Pelosinus fermentans B4]
gi|421057520|ref|ZP_15520331.1| ribokinase [Pelosinus fermentans B3]
gi|421067624|ref|ZP_15529080.1| ribokinase [Pelosinus fermentans A12]
gi|421073663|ref|ZP_15534712.1| ribokinase [Pelosinus fermentans A11]
gi|392442392|gb|EIW19982.1| ribokinase [Pelosinus fermentans B4]
gi|392443652|gb|EIW21161.1| ribokinase [Pelosinus fermentans A11]
gi|392448867|gb|EIW26041.1| ribokinase [Pelosinus fermentans A12]
gi|392451901|gb|EIW28870.1| ribokinase [Pelosinus fermentans DSM 17108]
gi|392462812|gb|EIW38841.1| ribokinase [Pelosinus fermentans B3]
Length = 309
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 165/306 (53%), Gaps = 18/306 (5%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
P++VVGS N D+ V + LP+ GET+ KT T GGKG NQA AKL VG VG
Sbjct: 7 PILVVGSLNMDLVVTVAELPQKGETIFGKTFTTFPGGKGGNQAVTAAKLGSKVTMVGAVG 66
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G+ + +LS GV Y+ + TG A++ + G NSI++V G N +C +
Sbjct: 67 RDEFGERLRCSLSQSGVATSYIASAE---TSTGTALITVDQRGANSIVVVPGANYACCQQ 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
D LE + GI+L+Q EIP+++ KAAR G I + AP I +ELL
Sbjct: 124 DI-DSALEAAEVPGILLVQNEIPETIVEYTIKAARGKGWTTILNP----APARLISEELL 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ IDIL PNE+E LTG + ++ ++ ++ G V++ LG KG AL E+
Sbjct: 179 STIDILIPNETEASVLTGGKAGAEDEAAQILL---DRGAAAVIITLGNKG-ALCCTVEQ- 233
Query: 306 IKQSIIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
KQ I+P +DTT AGD + + A EGK+ E +FAAA A++ V GA PS+
Sbjct: 234 -KQQILPYKVDAVDTTAAGDAYVGALATALAEGKTVLESAKFAAAVAAIAVTKAGAQPSL 292
Query: 365 PDRKSV 370
P R V
Sbjct: 293 PWRDEV 298
>gi|376277282|ref|YP_005153343.1| ribokinase [Brucella canis HSK A52141]
gi|363405656|gb|AEW15950.1| ribokinase [Brucella canis HSK A52141]
Length = 306
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 161/309 (52%), Gaps = 6/309 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG VG
Sbjct: 3 IFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGH 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 63 DAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARWSSA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELLNFI 248
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 120 DIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLIALS 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E +K
Sbjct: 180 DIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE--VKH 237
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P +
Sbjct: 238 FTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAAAPTAR 297
Query: 369 SVLNLLQYA 377
V L+ A
Sbjct: 298 EVEELIGRA 306
>gi|423066537|ref|ZP_17055327.1| ribokinase [Arthrospira platensis C1]
gi|406711845|gb|EKD07043.1| ribokinase [Arthrospira platensis C1]
Length = 312
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 164/308 (53%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ V+ RLP+ GET+ ++AGGKGANQA ++L T VG+VG
Sbjct: 3 ILVFGSINMDLVVQTPRLPQPGETLTGYNFLSVAGGKGANQAVAASRLGAKTEMVGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA + + + L R+ V++D +G A + + ++G+N II++ G N PE
Sbjct: 63 DAFAQELLEGLKAN--RVGCEGVLRDNCTHSGLATIAVDNNGENQIIVIPGANGCVGPED 120
Query: 190 FGDEDLE-VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ LE + ++A +LLQ EIP AA++AGV VI D PQ+L +
Sbjct: 121 V--QRLEPLWEEATSLLLQLEIPLKAVEAAIHAAKNAGVRVILDPAPAPDVFPQQLYPLV 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI++PNE+E +L G ++ E +A GV+ ++KLG+KG + E
Sbjct: 179 DIITPNETEASQLVGFAVNNVETAQKAADTMLDFGVKTAVIKLGSKGVFWATKSES---- 234
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PA V +DT AGD F A EG+S +E + + AA +L GA S+PD
Sbjct: 235 FWVPAFAVNAVDTVAAGDAFNGGMAAALDEGRSLKEAILWGAATGALSTTQVGAQSSLPD 294
Query: 367 RKSVLNLL 374
R+++ ++L
Sbjct: 295 RQALDDVL 302
>gi|209523275|ref|ZP_03271831.1| ribokinase [Arthrospira maxima CS-328]
gi|209496426|gb|EDZ96725.1| ribokinase [Arthrospira maxima CS-328]
Length = 312
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 164/308 (53%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ V+ RLP+ GET+ ++AGGKGANQA ++L T VG+VG
Sbjct: 3 ILVFGSINMDLVVQTPRLPQPGETLTGYNFLSVAGGKGANQAVAASRLGAKTEMVGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA + + + L R+ V++D +G A + + ++G+N II++ G N PE
Sbjct: 63 DAFAQELLEGLKAN--RVGCEGVLRDNCTHSGLATIAVDNNGENQIIVIPGANGCVGPED 120
Query: 190 FGDEDLE-VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ LE + ++A +LLQ EIP AA++AGV VI D PQ+L +
Sbjct: 121 V--QRLEPLWEEATSLLLQLEIPLKAVEAAIHAAKNAGVRVILDPAPAPDVFPQQLYPLV 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI++PNE+E +L G ++ E +A GV+ ++KLG+KG + E
Sbjct: 179 DIITPNETEASQLVGFAVNNVETAQKAADTLLDFGVKTAVIKLGSKGVFWATKSES---- 234
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PA V +DT AGD F A EG+S +E + + AA +L GA S+PD
Sbjct: 235 FWVPAFAVNAVDTVAAGDAFNGGMAAALDEGRSLKEAILWGAATGALSTTQVGAQSSLPD 294
Query: 367 RKSVLNLL 374
R+++ ++L
Sbjct: 295 RQALDDVL 302
>gi|218440787|ref|YP_002379116.1| ribokinase [Cyanothece sp. PCC 7424]
gi|218173515|gb|ACK72248.1| ribokinase [Cyanothece sp. PCC 7424]
Length = 299
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 160/304 (52%), Gaps = 18/304 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS+N D+ ++ RLP GET+ GGKGANQA +L + +VG+
Sbjct: 3 ILVIGSSNTDMVIQAPRLPARGETILGGQFVMNPGGKGANQAVAATRLGGKVRLLTKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ L G+ DY V+ D P+G A++ + G+N+I++ G NM+
Sbjct: 63 DLFGQQTISRLKNEGILTDY--VLIDSRYPSGVALITVDEGGENTIVVASGANMA----- 115
Query: 190 FGDEDLEV----VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G++++ V +++A I+LLQ EIP AK A + G VI + P+ LL
Sbjct: 116 LGEKEILVLMNPIEQATIILLQLEIPLQTVELAAKTASNLGKTVILNPAPA-YPLSDSLL 174
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ I IL+PN++E LTG+ +S E A HK GV V++ LG +G+ L E
Sbjct: 175 SKISILTPNQTEAQMLTGIKVNSPETADLAAQHLHKKGVANVIITLGKEGAYLCNEQ--- 231
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+IP V +DTT AGDTF + AV +EGK E + FA AASL V GA S
Sbjct: 232 -TTQLIPGYPVEAVDTTAAGDTFNGALAVALLEGKELIEAISFANLAASLSVTRLGAQSS 290
Query: 364 MPDR 367
+P R
Sbjct: 291 IPYR 294
>gi|56965405|ref|YP_177137.1| ribokinase [Bacillus clausii KSM-K16]
gi|56911649|dbj|BAD66176.1| ribokinase [Bacillus clausii KSM-K16]
Length = 292
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 167/305 (54%), Gaps = 17/305 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V +P +GETV QT GGKGANQA A+L +G+VG
Sbjct: 2 ITVVGSINIDLVVHTGTMPVLGETVLGGEFQTNPGGKGANQAVAAARLGADVTMIGKVGN 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GKL+TD L + DY+ V KDG TG A++ + ++ N+I++ G N S PE+
Sbjct: 62 DPYGKLVTDNLQNEQINTDYIEVEKDG--HTGVAMITV-TNNDNAIVVAPGANFSWKPEE 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +V K+ +++LQ E+P ++AK + VI + P+P LL+ +D
Sbjct: 119 AA-QYRDVFKQTNVLVLQLEVPLPFIEEIAKIGKEERCIVILNPAPAQ-PLPSSLLDLVD 176
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE+E + ++Q E V+ + ++LV G KG+A + +G++ ++ +
Sbjct: 177 YITPNETECQTI-------FKQSVEQAVQRYP---NKLLVTEGKKGAA-YHDGQQLVQVN 225
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P A V+DTTGAGDTF + A G+ E + FA AAASL V+ GA MP ++
Sbjct: 226 GFP-ANVVDTTGAGDTFNGALAAALASGQQLAEAVTFANAAASLSVEQAGAQAGMPSKQQ 284
Query: 370 VLNLL 374
VL L
Sbjct: 285 VLARL 289
>gi|417842212|ref|ZP_12488306.1| Ribokinase [Haemophilus haemolyticus M19501]
gi|341947427|gb|EGT74076.1| Ribokinase [Haemophilus haemolyticus M19501]
Length = 307
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L ++GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 6 LTILGSINTDHVISVPYFAKPGETLTGQNYQITYGGKGANQAVAAARLGAKVAFISCIGS 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A G+ ++N V TG A + + G+NSI++ G N + E
Sbjct: 66 DSIGKTMKNAFEQEGIDTTHINTVSQE--MTGMAFIQVAQSGENSIVLASGAN-AHLGEM 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 123 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLNP----APAQILSDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 179 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHDKGIKTVMITLGAKGVFVSRKGKSRI 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 239 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 296
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 297 RQETLEFLEHA 307
>gi|349700855|ref|ZP_08902484.1| heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
[Gluconacetobacter europaeus LMG 18494]
Length = 317
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 156/315 (49%), Gaps = 20/315 (6%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D V + R + GET+ +S T GGKGANQA A+L G
Sbjct: 6 PHIAVIGSTNIDFVVHVARFAQPGETLHVHSSTTGLGGKGANQAIAVARLGQEVALAGWT 65
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D + L R++ +++D TG A + + G+N I++ GG NM
Sbjct: 66 GRDMLADMARTTLEQA--RVNTRWLMEDPAAGTGRAFITIDHAGENQILVDGGANMRHGA 123
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-----AGGMDAPIPQ 242
E + +A +V++Q E+P ++ +++A+ AR+ +PV+ D AGG+ P+
Sbjct: 124 EA-ASRLAPALDQAILVMMQMEMPPALVLEMARQARARAIPVMLDPAPVPAGGL----PE 178
Query: 243 ELLNFIDILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+L DIL+PNE E LTG+ PTD + A + H GV+ ++KLG +G A
Sbjct: 179 DLYALADILTPNERETRDLTGIEPTDETTALQAARI-LHARGVRTAIIKLGHRGVAY--- 234
Query: 302 GEKPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
P Q +P R +DT AGD F A A G + E +RFAAA +L G
Sbjct: 235 -SAPDGQGFVPPFHVRAVDTVAAGDCFNAGLACALARGAAIGEAVRFAAACGALATTRPG 293
Query: 360 AIPSMPDRKSVLNLL 374
A + PD K V LL
Sbjct: 294 AAQAAPDGKEVAALL 308
>gi|386265106|ref|YP_005828598.1| Ribokinase [Haemophilus influenzae R2846]
gi|309972342|gb|ADO95543.1| Ribokinase [Haemophilus influenzae R2846]
Length = 307
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 163/312 (52%), Gaps = 13/312 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ Q + GGKG NQA A+L F+G VG
Sbjct: 5 LTVLGSINADHVISVPYFSKPGETLTGDNYQLVYGGKGGNQAVAAARLGANVEFIGCVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +A + G+ ++N V TG A + + G+NSI++ G N + E
Sbjct: 65 DVIGETMKNAFAQEGIDTTHINTVSQE--MTGMAFIQVAQSGENSIVLASGAN-AHLGEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLNP----APAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMP-TDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE+E LTG+ TD + +A H G+Q V++ LGAKG + +G+
Sbjct: 178 LIDIITPNETEAEILTGIAVTDDEQSAVKAASVFHDKGIQTVMITLGAKGVFVSRKGKSR 237
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
I + + IDTT AGDTF F +E K+ +E +RF AAA++ V KGA S+P
Sbjct: 238 IIKGF--CVQAIDTTAAGDTFNGGFVTALLEEKAFDEAIRFGQAAAAISVTKKGAQSSIP 295
Query: 366 DRKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 TRQETLEFLEHA 307
>gi|145630315|ref|ZP_01786096.1| ribokinase [Haemophilus influenzae R3021]
gi|144984050|gb|EDJ91487.1| ribokinase [Haemophilus influenzae R3021]
Length = 307
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L ++GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 6 LTILGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A G+ ++N V TG A + + +NSI++ G N S E
Sbjct: 66 DSIGKTMKNAFEQEGIDTTHINTVSQE--MTGMAFIQVAKSSENSIVLASGAN-SHLSEM 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 123 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 179 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF+ AAA++ V KGA S+P
Sbjct: 239 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFSQAAAAISVTKKGAQSSIPT 296
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 297 RQETLEFLEHA 307
>gi|170721144|ref|YP_001748832.1| ribokinase [Pseudomonas putida W619]
gi|169759147|gb|ACA72463.1| ribokinase [Pseudomonas putida W619]
Length = 302
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 158/300 (52%), Gaps = 13/300 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ +RLP+ GET+A ++ T+ GGKGANQA A+L VG VG+
Sbjct: 5 VVVVGSLNMDLVARAERLPRAGETLAGESFFTVPGGKGANQAVAAARLGASVAMVGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN---MSCW 186
DA G+ + AL G+ D V GV +G A++ + + QN I+I+ G N S
Sbjct: 65 DAYGQQLRQALEVEGI--DCQAVSACPGVSSGVALITVDAASQNCIVIIPGGNGQLTSAS 122
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
++F +++ A +V+ Q E+P D+V +A+ R G VI + P+P +
Sbjct: 123 VQRFD----ALLQAAEVVICQLEVPADTVAWALAR-GRELGKTVILNPAPATGPLPAQWF 177
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
ID L PNESE L G P + A + ++G +V+V LGA+G ALFV +
Sbjct: 178 AHIDYLIPNESEAEALAGEPVNDLASARRAGERLLQLGAGKVIVTLGAQG-ALFVSRDGS 236
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ P + +DTT AGDTF FA V G E + F AA+L V GA PS+P
Sbjct: 237 -RHFPAPQVKALDTTAAGDTFVGGFAAALVRGLEEGEAITFGQRAAALSVTRAGAQPSIP 295
>gi|357011366|ref|ZP_09076365.1| ribokinase [Paenibacillus elgii B69]
Length = 296
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 159/302 (52%), Gaps = 8/302 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGSAN D+ + RLP++GET+ GGKGANQA AK+ T+F+G+VG+
Sbjct: 3 IMVVGSANMDMVMRTSRLPEIGETMRGDGFFLAPGGKGANQAVACAKMGAETWFMGKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + D LSG GVR D++ ++ GV TG A + + +G NSII+ GG N P
Sbjct: 63 DIFGQSLIDRLSGFGVRTDFLK--REPGVTTGVAAITV-CNGNNSIILDGGANSEVSPGY 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E++ A V+LQ EIP +V + + VP+ + PI +L +D
Sbjct: 120 IRGYQQELLSAAA-VMLQLEIPMETVYEVIRLVKGQ-VPIFLNPAPA-VPIEDAVLQGVD 176
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+PNE E TG+ S + EA+ K G++ L+ LG KG + E K++
Sbjct: 177 YFTPNEIECRIYTGIEIRSTDDAFEALNKLRDKGIRYPLITLGEKGIVYYNGTENVYKEA 236
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
IDTT AGDTF+ + A + GKS +E + A A+S+ V GA ++P
Sbjct: 237 --RKVEAIDTTAAGDTFSGTLAAMIIAGKSMDEAVDIAQRASSIAVTRLGAQDAIPMLSE 294
Query: 370 VL 371
VL
Sbjct: 295 VL 296
>gi|16272449|ref|NP_438663.1| ribokinase [Haemophilus influenzae Rd KW20]
gi|260580432|ref|ZP_05848260.1| ribokinase [Haemophilus influenzae RdAW]
gi|1172869|sp|P44331.1|RBSK_HAEIN RecName: Full=Ribokinase
gi|1573486|gb|AAC22163.1| ribokinase (rbsK) [Haemophilus influenzae Rd KW20]
gi|260092774|gb|EEW76709.1| ribokinase [Haemophilus influenzae RdAW]
Length = 306
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFTKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A + G+ ++N V TG A + + +NSI++ G N S E
Sbjct: 65 DSIGKTMKNAFAQEGIDTTHINTVSQE--MTGMAFIQVAKSSENSIVLASGAN-SHLSEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVEVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|306845363|ref|ZP_07477938.1| ribokinase [Brucella inopinata BO1]
gi|306274279|gb|EFM56091.1| ribokinase [Brucella inopinata BO1]
Length = 313
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 161/312 (51%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLVSAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
V L+ A
Sbjct: 302 TAHEVEELIGRA 313
>gi|421076700|ref|ZP_15537682.1| ribokinase [Pelosinus fermentans JBW45]
gi|392525312|gb|EIW48456.1| ribokinase [Pelosinus fermentans JBW45]
Length = 309
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 18/306 (5%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
P++VVGS N D+ V + LP+ GET+ KT T GGKG NQA AKL VG VG
Sbjct: 7 PILVVGSLNMDLVVTVAELPQKGETIFGKTFTTFPGGKGGNQAVTAAKLGSKVTMVGAVG 66
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G+ + +LS GV Y+++ + TG A++ + G NSI++V G N +C +
Sbjct: 67 RDEFGERLRCSLSQSGVGTSYISLAE---TSTGTALITVDQRGANSIVVVPGANYACCQQ 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
D LE + GI+L+Q EIP+++ +AA+ G I + AP I + LL
Sbjct: 124 DI-DSALEAAEVPGILLVQNEIPETIVEYTIRAAKGKGWTTILNP----APARLISEGLL 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ IDIL PNE+E LTG + ++ ++ ++ G V++ LG+KG AL E+
Sbjct: 179 SMIDILIPNETEASVLTGGKAGAEDEAAQVLL---DRGAAAVIITLGSKG-ALCCTVEQ- 233
Query: 306 IKQSIIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
KQ I+P +DTT AGD + + A EGK+ E +FAAA A++ V GA PS+
Sbjct: 234 -KQQILPYKVDAVDTTAAGDAYVGALATALAEGKTVLESAKFAAAVAAIAVTRPGAQPSL 292
Query: 365 PDRKSV 370
P R V
Sbjct: 293 PWRDEV 298
>gi|391232568|ref|ZP_10268774.1| sugar kinase, ribokinase [Opitutaceae bacterium TAV1]
gi|391222229|gb|EIQ00650.1| sugar kinase, ribokinase [Opitutaceae bacterium TAV1]
Length = 332
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 160/327 (48%), Gaps = 27/327 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS-HPTY--FVGQ 126
+ +VGSAN D+ + + RLP+ GET+ T GGKGANQA + + P + FVG+
Sbjct: 11 VAIVGSANMDLSIPVTRLPRTGETILGGDMTTNPGGKGANQAVAAQRAAGRPGFCRFVGR 70
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+D G+ + +AL V D ++ G P+G A +M+ +G N+I++ G N
Sbjct: 71 VGDDVFGRQLRNALDADSV--DTAALLTTPGAPSGTAAIMVNPEGDNAIVVSPGANARLT 128
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMD--------A 238
P E + A ++ +Q E+P AR AGV I D A
Sbjct: 129 PADIAGVR-EAITTAAVLTVQLEVPFDTVAAALSLAREAGVLTILDPAPAPQPASAGALA 187
Query: 239 PIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL 298
+P L +DI SPN+SE LTG+ D + A + + G + V++KLG G+A+
Sbjct: 188 TLPDALWQ-VDIFSPNQSEARLLTGIAVDDLDSARAAGERLLQFGPKTVVLKLGGLGAAI 246
Query: 299 FVE--------GEKPIKQSIIPAAR---VIDTTGAGDTFTASFAVGFVEGKSREECLRFA 347
G P+ + PA R V+DTT AGD FT + A EG E +RFA
Sbjct: 247 ITAAPSGAGQGGNAPVFTHV-PAIRIPAVVDTTAAGDAFTGALATALAEGHPLPEAVRFA 305
Query: 348 AAAASLCVQVKGAIPSMPDRKSVLNLL 374
A SL V+GA ++P R+ +L L
Sbjct: 306 GIAGSLACTVRGAQSAIPHRRDILARL 332
>gi|225685875|ref|YP_002733847.1| ribokinase [Brucella melitensis ATCC 23457]
gi|256261913|ref|ZP_05464445.1| ribokinase [Brucella melitensis bv. 2 str. 63/9]
gi|384212543|ref|YP_005601626.1| ribokinase [Brucella melitensis M5-90]
gi|384409643|ref|YP_005598263.1| ribokinase [Brucella melitensis M28]
gi|225641980|gb|ACO01893.1| ribokinase [Brucella melitensis ATCC 23457]
gi|263091393|gb|EEZ15929.1| ribokinase [Brucella melitensis bv. 2 str. 63/9]
gi|326410190|gb|ADZ67254.1| ribokinase [Brucella melitensis M28]
gi|326553483|gb|ADZ88122.1| ribokinase [Brucella melitensis M5-90]
Length = 313
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 163/315 (51%), Gaps = 12/315 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ +TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPEQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N C
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGANARCS 124
Query: 187 P---EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQ 242
+ +G + + KA I LLQRE+P N+ VAKA R+AG V+ D + DA
Sbjct: 125 SADIDAYGAD----IAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMA 180
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
+L+ DI+SPNE+E +TG+ A K + G + V++KLG++G+ L
Sbjct: 181 DLIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTAD 240
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E +K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA
Sbjct: 241 E--VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGA 298
Query: 363 SMPDRKSVLNLLQYA 377
+ P + V L+ A
Sbjct: 299 AAPTAREVEELIGRA 313
>gi|148657386|ref|YP_001277591.1| ribokinase [Roseiflexus sp. RS-1]
gi|148569496|gb|ABQ91641.1| ribokinase [Roseiflexus sp. RS-1]
Length = 305
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/309 (38%), Positives = 162/309 (52%), Gaps = 15/309 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ V RLP GET+ T T GGKGANQA A+L PT VG+VG+
Sbjct: 3 VVVFGSINMDLVVRTPRLPTPGETLTGHTFFTAPGGKGANQAVACARLGVPTRMVGRVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +L GV+ D V+ G P+G A++ + +N+I+IV G N +
Sbjct: 63 DLFGEQLRASLRSFGVQDD--GVLTTPG-PSGVALIAVDDTAENTIVIVPGANGAV---S 116
Query: 190 FGD-EDLE-VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
D LE + A +LLQ E+P + A+AA + GV VI D P+P EL
Sbjct: 117 IADIPRLERALDGARALLLQLEVPIETVVAAARAAHTRGVTVILDPAPA-LPLPDELYAL 175
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEGEKPI 306
DI++PNE E LTG+ + A G ++V +KLGA G+ EGE+
Sbjct: 176 ADIITPNEHEATTLTGIAVHDDQGAIAAARALIARGARRVALKLGACGALTADAEGEQFW 235
Query: 307 KQ-SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
++ P +DT AGD F AV EG+S +E +R+ AA +L V GA PSMP
Sbjct: 236 SPFTVTP----VDTVAAGDAFNGGLAVALSEGRSFDEAIRWGLAAGALSVTRHGAQPSMP 291
Query: 366 DRKSVLNLL 374
+R VL LL
Sbjct: 292 ERNEVLTLL 300
>gi|410087812|ref|ZP_11284513.1| Ribokinase [Morganella morganii SC01]
gi|409765806|gb|EKN49909.1| Ribokinase [Morganella morganii SC01]
Length = 399
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 167/309 (54%), Gaps = 22/309 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L ++GS N D+ E++R P VGET+ A ++ GGKGANQAA ++++ + +VG+
Sbjct: 96 LYILGSFNLDVVTEVERFPSVGETIRAISTGFYPGGKGANQAAAASEINSRVHLFVKVGD 155
Query: 130 DANG----KLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQS-DGQNSIIIVGGTNMS 184
D+ G K + +G ++KD V TG A+VM++S G NSIII G N +
Sbjct: 156 DSFGADAEKYFSTTKTGS------YTLIKDISVKTGSALVMVESLTGNNSIIIDQGANAT 209
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
+ D+ +K A + L Q E + A+ G VI + AP + +
Sbjct: 210 ITKAEIL-SDINNLKSAKVFLTQLENNIDITRFTIDIAKMCGCYVILNP----APYSENI 264
Query: 245 ---LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
L+ +D+L+PN +E ++ + +A+ H++GV+++++ LG G AL+
Sbjct: 265 MSHLSSVDLLTPNGTEAELISDIKISDLHSAEQAIRVIHRLGVKEIVMTLGDNG-ALYFN 323
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
G S I A+ V+DT+GAGD FT S A G VEG+S +E ++FA A ASL V+ KGA
Sbjct: 324 GTTMKHYSAINAS-VVDTSGAGDAFTGSLAAGLVEGRSMDEAIKFAVAYASLAVEKKGA- 381
Query: 362 PSMPDRKSV 370
SMP SV
Sbjct: 382 SSMPSANSV 390
>gi|418327207|ref|ZP_12938375.1| ribokinase [Staphylococcus epidermidis VCU071]
gi|365223214|gb|EHM64506.1| ribokinase [Staphylococcus epidermidis VCU071]
Length = 307
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVVAQLEVPFVAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E ++G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLELGISAVLITLGEQGTYYAYQ 234
Query: 302 GEKPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
+ ++PA +VIDTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 235 EQ----YKMVPAFNVKVIDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|428320866|ref|YP_007118748.1| ribokinase [Oscillatoria nigro-viridis PCC 7112]
gi|428244546|gb|AFZ10332.1| ribokinase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 157/312 (50%), Gaps = 17/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ + RLP+ GET+ T GGKGANQA A+L T+ +G+VG
Sbjct: 3 IIVFGSINIDLAAKTPRLPQPGETIIGSNFFTAGGGKGANQAVAAARLGTSTHIIGRVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + + L GV D NV+ D +G A++ + GQN+II++ G N
Sbjct: 63 DKFAEELLTNLQSYGVNTD--NVLIDQNTHSGVAIIAVDETGQNNIIVIPGAN-----NN 115
Query: 190 FGDEDLEVVKKAGIVLL----QREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G+ D+E +KK Q EIP V + AKAAR AGV VI D A +P EL
Sbjct: 116 VGEADIERLKKLLTAATSLLLQLEIPLEVVQKAAKAARQAGVRVILDPAPARADLPLELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE E G+L G + E A + + GV+ V+VKLG +G+ E
Sbjct: 176 PLIDIITPNEVEAGQLVGFRVNDTETAILAAKQLQERGVKNVIVKLGDRGAVAVTADET- 234
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+PA V IDT AGD F A G S E +R+ AAA +LC GA +
Sbjct: 235 ---FFVPAFAVEAIDTVAAGDAFNGGLASALDAGLSLSEAVRWGAAAGALCTTKVGAQGA 291
Query: 364 MPDRKSVLNLLQ 375
M DR + N L
Sbjct: 292 MCDRATFDNFLH 303
>gi|376001449|ref|ZP_09779319.1| ribokinase [Arthrospira sp. PCC 8005]
gi|375330278|emb|CCE15072.1| ribokinase [Arthrospira sp. PCC 8005]
Length = 312
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ V+ RLP+ GET+ ++AGGKGANQA ++L T VG+VG
Sbjct: 3 ILVFGSINMDLVVQTPRLPQPGETLTGYNFLSVAGGKGANQAVAASRLGAKTEMVGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA + + + L R+ V++D +G A + + ++G+N III+ G N PE
Sbjct: 63 DAFAQELLEGLKAN--RVGCEGVLRDNCTHSGLATIAVDNNGENQIIIIPGANGCVGPED 120
Query: 190 FGDEDLE-VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ LE + +A +LLQ EIP AA++AGV VI D PQ+L +
Sbjct: 121 V--QRLEPLWGEATSLLLQLEIPLKAVEAAIHAAKNAGVRVILDPAPAPDVFPQQLYPLV 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI++PNE+E +L G ++ E +A GV+ ++KLG+KG + E
Sbjct: 179 DIITPNETEASQLVGFRVNNVETAQKAADTMLDFGVKTAVIKLGSKGVFWATKSES---- 234
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PA V +DT AGD F A EG+S +E + + AA +L GA S+PD
Sbjct: 235 FWVPAFAVNAVDTVAAGDAFNGGMAAALDEGRSLKEAILWGAATGALSTTQVGAQSSLPD 294
Query: 367 RKSVLNLL 374
R+++ ++L
Sbjct: 295 RQALDDVL 302
>gi|427708331|ref|YP_007050708.1| ribokinase [Nostoc sp. PCC 7107]
gi|427360836|gb|AFY43558.1| ribokinase [Nostoc sp. PCC 7107]
Length = 306
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 153/304 (50%), Gaps = 17/304 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ LP GET+ + GGKGANQA A+L PT VG+VG
Sbjct: 3 IIVFGSINIDLVATAPHLPTSGETLLGNDFFQVPGGKGANQAVALARLGIPTQMVGRVGS 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
G + + L GV+ + N++ D V +G A++++ GQN I+++ G N K
Sbjct: 63 QGFGAELLNNLQTAGVQTE--NILLDETVSSGIAIIIVDDAGQNQIVVIPGAN-----GK 115
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
D+E ++ A +LLQ EIP S + AKA R+A + VI D + +P EL
Sbjct: 116 VNQADVERLSPLLPTAKALLLQLEIPLSAVVAAAKAGRNANITVILDPAPAQSNLPAELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+DI++PNE E G+L G DS E ++A + GV+ +VKLGAKG E
Sbjct: 176 PLVDIITPNEVEAGQLVGFAVDSPESAAKAGAVLLQKGVKSAIVKLGAKGVVCTTTEET- 234
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+PA V+DT AGD F A G + + + + A A +L GA S
Sbjct: 235 ---FFVPAFSVNVVDTVAAGDAFNGGLAAALYTGMTLHQAVIWGATAGALATTKLGAQTS 291
Query: 364 MPDR 367
+PDR
Sbjct: 292 LPDR 295
>gi|373464891|ref|ZP_09556394.1| ribokinase [Lactobacillus kisonensis F0435]
gi|371761662|gb|EHO50264.1| ribokinase [Lactobacillus kisonensis F0435]
Length = 330
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 156/314 (49%), Gaps = 27/314 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D I P+ GETV K AGGKGANQA A+ T F+GQ+G
Sbjct: 24 VTVLGSLNVDTSFRIKSFPQPGETVQVKEKSNAAGGKGANQAVAAAREGAQTAFIGQIGN 83
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + D+L +D V ++ V TG A +ML DGQN I++ GG N +
Sbjct: 84 DGAGKFMLDSLEAD--HIDGTYVSQNESVGTGTANIMLDEDGQNCILVYGGAN-----QT 136
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-- 243
D D++ ++K + ++ Q E P + I K A++ GV + + AP P
Sbjct: 137 LTDADVQKAEPIIKDSDFIVAQFETPQAAAITAFKIAKANGVTTVLNP----APAPATAI 192
Query: 244 ---LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
LL DI+ PNE E +TG+ E + + + KMGV +++ +G KG+
Sbjct: 193 DPALLKLTDIIVPNELESASITGIKITDEESMIQTAAEFRKMGVPNLIITVGDKGAFYST 252
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQV 357
+ +IPA +V +DTT AGDTF +F S ++FA A+SL VQ
Sbjct: 253 QA----GHDLIPAYKVKAVDTTAAGDTFIGAFVSQVATDFSNIASAIKFAEHASSLTVQR 308
Query: 358 KGAIPSMPDRKSVL 371
GA PS+P + VL
Sbjct: 309 LGAQPSIPKLEEVL 322
>gi|406836212|ref|ZP_11095806.1| ribokinase [Schlesneria paludicola DSM 18645]
Length = 317
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 164/313 (52%), Gaps = 6/313 (1%)
Query: 59 VPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS 118
+P N P +VVVGS N D+ + +LP+ GETV+ + QT+ GGKGANQA +L
Sbjct: 1 MPNNENPAAPRIVVVGSINMDLVARMVQLPRPGETVSGDSFQTIPGGKGANQAVAARRLG 60
Query: 119 HPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIV 178
+ VG++GED+ G ++ + L G+ + V +G A++ ++S G N I ++
Sbjct: 61 ANVFMVGRLGEDSFGTILREHLIADGIETSH--VFSTPSCSSGVALIGVESSGANCITVI 118
Query: 179 GGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMD 237
G N + + L ++ A +++Q E P + A+ GV + D A
Sbjct: 119 PGANGQLTVQDV-EASLGLITHAKAIIVQLESPTPAIAAAIQFAQQNGVLTVLDPAPAPP 177
Query: 238 APIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
+PQEL+ +D+LSPN++E LTG+ +E ++A + G + V++KLG+ G+
Sbjct: 178 GRLPQELMR-VDVLSPNQTEAEALTGIVVHDWETAAQAASDLQQHGAKDVVLKLGSLGAF 236
Query: 298 LFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQV 357
+ ++ + IP ++DTT AGD FTA+ V EG+S E +F A +L
Sbjct: 237 VATRDGHTVRVNAIP-TNIVDTTAAGDAFTAALTVALCEGRSLPEAAKFGCLAGTLACTR 295
Query: 358 KGAIPSMPDRKSV 370
GA P+MP R +
Sbjct: 296 FGAQPAMPTRDEL 308
>gi|298245530|ref|ZP_06969336.1| ribokinase [Ktedonobacter racemifer DSM 44963]
gi|297553011|gb|EFH86876.1| ribokinase [Ktedonobacter racemifer DSM 44963]
Length = 316
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 162/310 (52%), Gaps = 8/310 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTS-QTLAGGKGANQAACGAKLSHPTYFVG 125
P ++VVGS N D V + +P++GET+ A+ S + + GGKGANQA A++ G
Sbjct: 3 PKNILVVGSLNMDQVVRVPHIPRMGETLLAENSLKFVPGGKGANQAVAIARMGASVTMAG 62
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+VG D+ G + DA+ G+ D +V+D TG A + L +G N+I++ GGTNM
Sbjct: 63 RVGIDSFGDRLLDAMRTEGI--DTQLIVRDKEENTGTAFIFLSHEGDNAIVVAGGTNMLV 120
Query: 186 WPEKFGDEDLEV-VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
++ + + + A ++LQ EIP + + + A + GVPV + A + ++L
Sbjct: 121 GEDEAHMQQIHAALASAQALVLQLEIPLATVTSLIEKADTLGVPVTLNLAPAQA-LSRDL 179
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE--- 301
L + +L NE+E +L+G S E H G+Q V++ LGA+G+ L
Sbjct: 180 LRKVTVLVLNETEATQLSGQQVHSVEDARIVATILHGYGIQTVVITLGARGAMLVTRDTT 239
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
G+ P + +DTT AGD F + V EG+ E+ LRFA AASL + GA
Sbjct: 240 GQSRCIYQASPKVQPVDTTAAGDCFVGALTVALSEGQRAEDALRFAVYAASLKIARFGAQ 299
Query: 362 PSMPDRKSVL 371
+P R+ VL
Sbjct: 300 SGIPYREEVL 309
>gi|427734993|ref|YP_007054537.1| ribokinase [Rivularia sp. PCC 7116]
gi|427370034|gb|AFY53990.1| ribokinase [Rivularia sp. PCC 7116]
Length = 303
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 160/312 (51%), Gaps = 17/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ RLP GET+ GGKGANQA AKL PT +G+VG+
Sbjct: 3 IIVFGSINIDLVATAPRLPTAGETLLGHDFFQAPGGKGANQAVAIAKLGIPTEIIGRVGK 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
+ + + + L GV+ D NV D +G A++ + G+N I+++ G N E+
Sbjct: 63 KSFSEELINYLQAAGVKTD--NVFVDETASSGVAIINVDDAGENQIVVIPGAN-----ER 115
Query: 190 FGDEDLEVV------KKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
ED+E + KKA +LLQ EIP S I AK A+ AGV VI D +P+E
Sbjct: 116 VNLEDVERLSQLLPGKKA--LLLQLEIPISSVIAAAKEAKKAGVKVILDPAPAQKELPEE 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
L +DIL+PNE E +L G P + + +A + GV+ +VKLGAKG E
Sbjct: 174 LYPLVDILTPNEVEAAQLVGFPVNGEDSAKKAAEVLLQKGVKCAVVKLGAKGVYCSTAAE 233
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ + + +DTT AGD F A +G S + + + +AA +L GA PS
Sbjct: 234 SFFTPAF--SVKTVDTTAAGDAFNGGLAAAISQGFSLRKAIVWGSAAGALAATKSGAQPS 291
Query: 364 MPDRKSVLNLLQ 375
+PDR++ LQ
Sbjct: 292 LPDRETFDKFLQ 303
>gi|398933740|ref|ZP_10665946.1| ribokinase [Pseudomonas sp. GM48]
gi|398159781|gb|EJM48068.1| ribokinase [Pseudomonas sp. GM48]
Length = 305
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 158/299 (52%), Gaps = 6/299 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLPK GET+ ++ T++GGKGANQA A+L +G
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPKGGETLIGESFATVSGGKGANQAVAAARLGAQVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + AL + ++ + DG +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDAYGEALRGALLVEQIDCQAVSTI-DGS--SGVALIVVDDNSQNTIVIVPGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E D V++ A +++ Q E+PD+ K R G VI + P+P +
Sbjct: 119 VEAIDRFD-SVIQAADVLICQLEVPDASVGHALKRGRELGKTVILNPAPASRPLPSDWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS E A + MG +V++ LGA+G LF G++
Sbjct: 178 SIDYLIPNESEASALSGLSVDSLETAQAAATRLVAMGAGKVIITLGAQG-LLFASGQR-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ A + +DTT AGDTF FA G+ + +RF AA+L V GA PS+P
Sbjct: 236 EHFPATAVKAVDTTAAGDTFVGGFAAALAAGQDEAQAIRFGQVAAALSVTRAGAQPSIP 294
>gi|330818940|ref|YP_004385919.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
gi|329130076|gb|AEB74628.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
Length = 306
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 153/308 (49%), Gaps = 8/308 (2%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T ++V+GS D+ IDR+P GETV A Q GGKGANQA A+L F+
Sbjct: 3 TKSDVLVIGSNMIDLISYIDRMPVEGETVEAPDFQMGFGGKGANQAVAAARLGSKVSFIS 62
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG DA G+ D + + + V G +G A + + N I+I+ G N
Sbjct: 63 MVGNDAFGQQQLDNFKNNHINITGVGV---GTKSSGAAPIFVDKSSDNRILIIKGANNEL 119
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
PE D+ +++K I++LQ+EIP N A +P++ + + + +
Sbjct: 120 TPEVL-DKYADLIKNTKIIVLQQEIPLETNYHAIDLANQYHIPILLNPAPANKDLDINHV 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+D SPNE+EL LTGMPT+ ++I +A K+GV+ +L+ LG+KG E
Sbjct: 179 TKVDFFSPNETELATLTGMPTNDMDEIKKAAHHMIKLGVKNMLITLGSKGVLWVNESTSQ 238
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ ++I +DTTGAGD+F SFA + G ++ A A++ V +G S P
Sbjct: 239 LIKAI--KVNAVDTTGAGDSFIGSFAHYYASGDDIPTAIKHANQYAAVTVTRRGTQKSYP 296
Query: 366 --DRKSVL 371
D S+L
Sbjct: 297 TADELSLL 304
>gi|265985790|ref|ZP_06098525.1| ribokinase [Brucella sp. 83/13]
gi|306839310|ref|ZP_07472126.1| ribokinase [Brucella sp. NF 2653]
gi|264664382|gb|EEZ34643.1| ribokinase [Brucella sp. 83/13]
gi|306405558|gb|EFM61821.1| ribokinase [Brucella sp. NF 2653]
Length = 313
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 161/312 (51%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ + V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALRQMREFGLDTGSVRVIDN--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYRADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQAQPLHDCVRYGSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
V L+ A
Sbjct: 302 TAHEVEELIGRA 313
>gi|420165852|ref|ZP_14672542.1| ribokinase [Staphylococcus epidermidis NIHLM088]
gi|394234675|gb|EJD80251.1| ribokinase [Staphylococcus epidermidis NIHLM088]
Length = 307
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 159/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQT-LAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I VL Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVLAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V IDTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAIDTTAAGDTFIGAFLSELNKDLSNIESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|256851546|ref|ZP_05556935.1| ribokinase [Lactobacillus jensenii 27-2-CHN]
gi|260660969|ref|ZP_05861884.1| ribokinase [Lactobacillus jensenii 115-3-CHN]
gi|297206361|ref|ZP_06923756.1| ribokinase [Lactobacillus jensenii JV-V16]
gi|256616608|gb|EEU21796.1| ribokinase [Lactobacillus jensenii 27-2-CHN]
gi|260548691|gb|EEX24666.1| ribokinase [Lactobacillus jensenii 115-3-CHN]
gi|297149487|gb|EFH29785.1| ribokinase [Lactobacillus jensenii JV-V16]
Length = 307
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/313 (35%), Positives = 161/313 (51%), Gaps = 20/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS+N D + + PK GET+ A GGKGANQA AK TYF+ +VGE
Sbjct: 4 IVVVGSSNVDTTLHVVDFPKPGETINALDITEAGGGKGANQAIAAAKAGSETYFINRVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D++G+ I L GV Y+ G TGHA + L GQN+III G N +
Sbjct: 64 DSSGRFILKQLKCYGVDTTYVQTTS--GTNTGHAYINLNEAGQNNIIIDHGANYELSIDD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D E++K + ++ Q E P V I+ K A+ V + + +P+ELL D
Sbjct: 122 I-DAAEELIKDSDAIITQLETPIEVAIEAFKIAKKNNVVTVLNPAPAIKDLPKELLKLTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ E I K H++G++ V++ G KGS + +
Sbjct: 181 MIAPNETESSLITGIEVTDLESIKANSDKLHELGIENVVITYGDKGSYISTSN----VEK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGK------SREECLRFAAAAASLCVQVKGAI 361
++PA +V DTTGAGDTF +GF+ + + E+ FAA A+S+ V GA
Sbjct: 237 LVPAFKVEAADTTGAGDTF-----IGFLTSQLNADFSNIEQAATFAARASSIAVSRLGAQ 291
Query: 362 PSMPDRKSVLNLL 374
PS+P V L+
Sbjct: 292 PSIPTYNEVKELM 304
>gi|403236495|ref|ZP_10915081.1| ribokinase [Bacillus sp. 10403023]
Length = 307
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 165/309 (53%), Gaps = 14/309 (4%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VVVGS N D+ VE D+ P VGET+ + + GGKGANQA A+L +G +
Sbjct: 6 PKIVVVGSINMDLVVETDKFPSVGETLRGNSFKQRPGGKGANQAVAAARLGASVTLIGAL 65
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D+ G+ + L + +D + +K+ +G A++ L ++ N+II++ G N C
Sbjct: 66 GDDSIGENLKHNLFKEKINIDNIKTIKN--TTSGIALITL-TEEDNNIIVIPGANNECLL 122
Query: 188 EKFGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELL 245
+ E +++K A +VL+Q E+P ++V + + A ++ +PV+ + A M PI ELL
Sbjct: 123 DIPNHE--QIIKDADVVLVQLEVPLETVKLTIDLAYKN-NIPVVLNPAPAMKLPI--ELL 177
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ L PNESE+ L G S+ Q E + +GV V++ G KG EK
Sbjct: 178 RKVTYLVPNESEMQFLCG---KSFTQ-EEGIDSLLDLGVSNVILTRGRKGVLYSNNKEKK 233
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
I Q + +DTTGAGD F AV E +S E + FAA +L V G++ +MP
Sbjct: 234 IYQKDSYKVKSVDTTGAGDAFNGGLAVAIAEKRSLHEAISFAAIVGALAVTSIGSLDAMP 293
Query: 366 DRKSVLNLL 374
RK V +L
Sbjct: 294 YRKKVEEIL 302
>gi|383789071|ref|YP_005473640.1| ribokinase [Caldisericum exile AZM16c01]
gi|381364708|dbj|BAL81537.1| ribokinase [Caldisericum exile AZM16c01]
Length = 300
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 163/315 (51%), Gaps = 34/315 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ V +R P+ GET+ K GGKGANQA K S F+G+VG
Sbjct: 6 IFVLGSINVDLVVYAERFPEAGETIVGKEFLINQGGKGANQAVAAKKASGNVTFIGRVGS 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + ++L V +++ D TG AV+ + G+N I I+ G N K
Sbjct: 66 DIFSTIAINSLRKFNVE---NHLIIDEHTETGIAVINVDDKGENRITIIEGAN-----GK 117
Query: 190 FGDEDLEVVK---KAG-IVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G E+L+ +K K G +LLQ EI V ++ ++ A+S+ VIFD AP+ EL
Sbjct: 118 VGSEELKYLKSNIKVGDFLLLQGEIHVDVLVEASQIAKSSNATVIFDP----APVKNELT 173
Query: 246 N---FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
F D ++PNE+EL +LT D YE + K+G + ++ K+G +G E
Sbjct: 174 KVIPFADFITPNENELRKLTN-SNDPYELL--------KLGAKNIVFKMGERGVRFINES 224
Query: 303 EKPIKQSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
E ++PA + V+DTTGAGDTF SF +G S ++ LRF AAA++ V KGA
Sbjct: 225 E----DFVVPAFKVDVVDTTGAGDTFNGSFVAALSKGMSIKDALRFGNAAAAISVTRKGA 280
Query: 361 IPSMPDRKSVLNLLQ 375
S P ++ L+
Sbjct: 281 AISSPTYDEIVKFLE 295
>gi|420251092|ref|ZP_14754285.1| ribokinase [Burkholderia sp. BT03]
gi|398058857|gb|EJL50733.1| ribokinase [Burkholderia sp. BT03]
Length = 309
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 146/301 (48%), Gaps = 4/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ RLP+ GET+A +AGGKG NQA A+L +G VG
Sbjct: 10 VTVVGSLNMDLVARAPRLPQPGETLAGHAFAQVAGGKGGNQAVAAARLGAQVSMLGCVGA 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG + L R+D + PTG A++++ QN+I+I+ G+N P
Sbjct: 70 DGNGAQLRAGLES--ERIDCTALETSATAPTGVALIIVDDGSQNAIVIIAGSNGEVTPAT 127
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +V+ Q E P + AAR G VI + P+P + L ID
Sbjct: 128 IARHEAALAAAQ-VVICQLETPPAAVHAALAAARRLGKTVILNPAPATGPLPADWLPLID 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P S + + A + GV+ V+V +GA+G + GE +
Sbjct: 187 YLIPNELEAATLTGLPVTSPAEANAAADALRRAGVRNVIVTIGAQG-VVAALGEAAPQHF 245
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF FA G + +RFA AAS+ V GA PS+P R
Sbjct: 246 DAPRVKAVDTTAAGDTFIGGFAAQLARGVDVADAIRFAQRAASISVTRAGAQPSIPTRAE 305
Query: 370 V 370
V
Sbjct: 306 V 306
>gi|407977760|ref|ZP_11158596.1| ribokinase [Bacillus sp. HYC-10]
gi|407415622|gb|EKF37210.1| ribokinase [Bacillus sp. HYC-10]
Length = 292
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 163/306 (53%), Gaps = 26/306 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS + D+ V ++ P GETV ++ +T+ GGKGANQA A+L Y VG+VG+
Sbjct: 4 IVVVGSCSMDLVVTSNKRPNAGETVLGESFKTVPGGKGANQAVASARLGADVYMVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ I L GVR YM V D T H ++ ++G NSI++V G N P
Sbjct: 64 DAYGQDIIRNLQAQGVRTTYMKPVTDMESGTAHIIL---AEGDNSIVVVKGANNEVTPH- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ +E L ++ G+VL+Q+EIP+ V G+PVI + AP + Q++L+
Sbjct: 120 YVNEALSSIEDIGMVLIQQEIPEETVEAVCAICSEKGIPVILNP----APARQVSQQILD 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
++PNE E + T I+EA+ + ++L+ G G F +G K +
Sbjct: 176 QAAYITPNEHEAALMFDGLT-----IAEAL----RQYPNKLLITEGKNGVRYF-DGSKEV 225
Query: 307 KQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++P + +DTTGAGDTF + AV +EGKS + L FA AAS+ V GA M
Sbjct: 226 ---LVPGYPVKAVDTTGAGDTFNGALAVALIEGKSLYDALAFANLAASISVTKFGAQGGM 282
Query: 365 PDRKSV 370
P R +
Sbjct: 283 PTRDEL 288
>gi|428281203|ref|YP_005562938.1| ribokinase [Bacillus subtilis subsp. natto BEST195]
gi|291486160|dbj|BAI87235.1| ribokinase [Bacillus subtilis subsp. natto BEST195]
Length = 282
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V D+ PK GETV + QT+ GGKGANQA A+L + VG+VG+D G I
Sbjct: 1 MDLVVTSDKRPKAGETVLGTSFQTVPGGKGANQAVAAARLGAQVFMVGKVGDDHYGTAIL 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L GV DYM V T H V+ ++G NSI++V G N P + + LE
Sbjct: 61 NNLKANGVCTDYMEPVTHTESGTAHIVL---AEGDNSIVVVKGANDDITP-AYALKALEQ 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++K +VL+Q+EIP+ +V K S +P++ + P+ QE ++ L+PNE E
Sbjct: 117 IEKVDMVLIQQEIPEETVDEVCKYCHSLDIPIMLNPAPA-RPLKQETIDHATYLTPNEHE 175
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV- 316
L T SEA+ + ++ + G +G V K+ +IP+ V
Sbjct: 176 SSILFPDLT-----TSEALA----LYPAKLFITEGKQG----VRYSAGSKEVLIPSFPVE 222
Query: 317 -IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
+DTTGAGDTF A+FAV EGK E LRFA AASL V GA MP R V LL
Sbjct: 223 PVDTTGAGDTFNAAFAVALAEGKDIEAALRFANRAASLSVCSFGAQGGMPTRNEVEELL 281
>gi|17988433|ref|NP_541066.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|260564166|ref|ZP_05834651.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|265989366|ref|ZP_06101923.1| ribokinase [Brucella melitensis bv. 1 str. Rev.1]
gi|17984217|gb|AAL53330.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|260151809|gb|EEW86902.1| ribokinase [Brucella melitensis bv. 1 str. 16M]
gi|263000035|gb|EEZ12725.1| ribokinase [Brucella melitensis bv. 1 str. Rev.1]
Length = 313
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 161/312 (51%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ +TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPEQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 302 TAREVEELIGRA 313
>gi|417853694|ref|ZP_12499048.1| ribokinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219125|gb|EGP04826.1| ribokinase [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 306
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 161/311 (51%), Gaps = 15/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAKPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGANAYLTETV 121
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F D+ + +A +L+Q E P S I AK A+SA V+ + P+P ELL
Sbjct: 122 VEQFADK----ITQADTLLMQLETPLSAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLT 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ ++A H+ G++ VL+ LG+KG +K
Sbjct: 177 QLDMITPNETETEILTGVKVVDEHSAAQAAALFHQKGIETVLITLGSKG---VYASQKGT 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++ A RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+
Sbjct: 234 PGKMVAAFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSI 293
Query: 365 PDRKSVLNLLQ 375
P R+ LN LQ
Sbjct: 294 PTRQETLNFLQ 304
>gi|423335666|ref|ZP_17313441.1| ribokinase [Lactobacillus reuteri ATCC 53608]
gi|337728896|emb|CCC04016.1| ribokinase [Lactobacillus reuteri ATCC 53608]
Length = 307
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 162/308 (52%), Gaps = 17/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D +++ R+P GET+AA + AGGKGANQA A+ T FVGQVG+
Sbjct: 5 VTIVGSLNVDTTMKVKRMPLPGETIAALSKTNAAGGKGANQAVAAARSGAETAFVGQVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK++ + L+ V D + D TG A ++L GQNSI++ GG N ++
Sbjct: 65 DAGGKMMINDLNDNNV--DTTGIHVDDQAGTGSAAILLDESGQNSILVYGGANQQLSVKE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D + + A V+ Q E P ++ + A+ GV I + AP I +LL
Sbjct: 123 VEDA-RDQIAAADFVIAQFETPQEATLRAFQIAKENGVKTILNP----APAHEINPDLLK 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D++ PNE+E LTG+ + + K +MGV+ +++ +GAKG+ +
Sbjct: 178 LTDLIIPNETESAALTGIIITDETSMLMSAAKFAQMGVRNLIITVGAKGAFYCTQD---- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ IPA +V +DTT AGDTF S + S E+ + +A A+SL VQ GA+PS
Sbjct: 234 GYNFIPAFKVNAVDTTAAGDTFIGSLSSQLKPDMSNIEKAIVYAQRASSLAVQKLGALPS 293
Query: 364 MPDRKSVL 371
+P V+
Sbjct: 294 IPTYDEVV 301
>gi|145298946|ref|YP_001141787.1| ribokinase [Aeromonas salmonicida subsp. salmonicida A449]
gi|418361100|ref|ZP_12961757.1| ribokinase [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|142851718|gb|ABO90039.1| ribokinase [Aeromonas salmonicida subsp. salmonicida A449]
gi|356687685|gb|EHI52265.1| ribokinase [Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 310
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 160/303 (52%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L P F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAPVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMRQGFEQDGI--DVSAVELDETLPTGIAIIYVSDEGENSIGISAEANGALSPAM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ A +LLQ E+P + AK ARS G V+ + P+P ELL +D
Sbjct: 122 VKRHE-AMIADAHTLLLQLEVPLESVFEAAKLARSHGTRVVLNPAPAR-PLPAELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ ++A + H+MG+ V++ LG++G ++ K +Q
Sbjct: 180 LITPNQTEAELLTGVKVSDEASAAQAAARFHQMGISDVMITLGSQG--VYCSNAK--QQQ 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVEAVDTTAAGDTFNGALLAAELAGADFNAAVRFAHGAAALSVTKFGAQNSIPSK 295
Query: 368 KSV 370
V
Sbjct: 296 VEV 298
>gi|297199008|ref|ZP_06916405.1| ribokinase [Streptomyces sviceus ATCC 29083]
gi|297147259|gb|EFH28548.1| ribokinase [Streptomyces sviceus ATCC 29083]
Length = 297
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 17/303 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ V +++ P+ GETV + +T+ GGKGANQA A+ +G VG+
Sbjct: 4 IAVLGSTNMDLVVYVEQAPRRGETVTGRDFRTIPGGKGANQAIAAARSGATVSMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L GV D++ V+ P+G A +++ +G N+I+++ G N +
Sbjct: 64 DGFGTRLRSTLEHSGVTTDHLRTVEG---PSGTAHIVVDDEGGNAIVVIPGANGTVDRLV 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
GDE L + A +LLQ EIP + + A+ AR+ GV I + P+P ELL D
Sbjct: 121 PGDEGL--IASADALLLQLEIPLAAVLAGARTARAHGVRTILTPAPVQ-PLPPELLAATD 177
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L PNE E LTG+ D + + + + V +V++ LGA GS +P+
Sbjct: 178 LLVPNEHEAATLTGL-ADPFAAGAALLDR-----VPRVVITLGAAGSVYLTRDAEPLA-- 229
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+PA RV +D+TGAGDT+ + AV E + E + +AAAAA+L VQ +GA SMP R
Sbjct: 230 -VPAPRVTAVDSTGAGDTYVGALAVALGEERPIREAMTWAAAAAALSVQREGASASMPYR 288
Query: 368 KSV 370
+
Sbjct: 289 SEI 291
>gi|254558094|ref|YP_003064511.1| ribokinase [Lactobacillus plantarum JDM1]
gi|308182163|ref|YP_003926291.1| ribokinase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|448819722|ref|YP_007412884.1| Ribokinase [Lactobacillus plantarum ZJ316]
gi|254047021|gb|ACT63814.1| ribokinase [Lactobacillus plantarum JDM1]
gi|308047654|gb|ADO00198.1| ribokinase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|448273219|gb|AGE37738.1| Ribokinase [Lactobacillus plantarum ZJ316]
Length = 306
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 162/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + ++ +PK GET+ K + GGKGANQA + T+F+G VG+
Sbjct: 4 VTVIGSINLDRTIRVENMPKPGETIHTKEIFSAGGGKGANQAVAAQRSGANTHFIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK + D L+ +++ + K TG A V + G+N I+I GG NM+ P
Sbjct: 64 DAAGKTMLDLLTQE--KINLAGITKMTNQSTGQAYVTVDDAGENQIMIHGGANMAFTPAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++ + V+ Q E ++ K A++AGV I + +P ELL D
Sbjct: 122 V-EAHRDIIETSDFVVAQFESAVDSTVEAFKIAQAAGVRTILNPAPAMEKVPAELLAVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H +G+ V++ +G+KG+ ++G +
Sbjct: 181 MIVPNETETETLTGIAITDEASMLKASAALHALGISAVIITIGSKGAFYDIDG----RHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + S E+ +R+ A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVEAVDTTSAGDTFIGAMSSVLNKDFSNLEDAIRYGNRASSIAVQRFGAQPSIPY 296
Query: 367 RKSV 370
+ +
Sbjct: 297 KNEI 300
>gi|420185640|ref|ZP_14691718.1| ribokinase [Staphylococcus epidermidis NIHLM040]
gi|394253320|gb|EJD98329.1| ribokinase [Staphylococcus epidermidis NIHLM040]
Length = 307
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 158/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E ++G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLELGISAVLITLGEQGTYYAYQ 234
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
+ ++PA V IDTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 235 EQ----YKMVPAFNVKAIDTTAAGDTFIGAFLSELNKDLSNIESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQSSIPTRKEV 302
>gi|404398134|ref|ZP_10989718.1| ribokinase [Pseudomonas fuscovaginae UPB0736]
Length = 306
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 157/301 (52%), Gaps = 5/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ +RLP+ GET+ ++ T+ GGKGANQA A+L VG VG+
Sbjct: 5 VVVIGSLNMDLVTRAERLPRAGETLIGQSFGTVPGGKGANQAVAAARLGAQVSMVGCVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + DAL G+ D V GV +G A++++ QN+I+IV G N E
Sbjct: 65 DAYGQQLRDALLVEGI--DCQAVTAVDGVSSGVALIVVDDSSQNAIVIVAGGNGCLTTEV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D V++ A +++ Q E+P K R G VI + AP+P + ID
Sbjct: 123 VKGFD-AVLQAADVIICQLEVPLETVGYALKRGRELGKTVILNPAPASAPLPADWYASID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE L+G+P DS A + G +V++ LGA+GS LF +G+
Sbjct: 182 YLIPNESEASALSGLPVDSQATAEAAATRLMAAGAGKVIITLGAQGS-LFADGQG-FTHF 239
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 240 PAPKVQALDTTAAGDTFVGGFAAALAAGKSEAEAIRFGQVAAALSVTRAGAQPSIPQLSE 299
Query: 370 V 370
V
Sbjct: 300 V 300
>gi|420162424|ref|ZP_14669180.1| ribokinase [Staphylococcus epidermidis NIHLM095]
gi|420168127|ref|ZP_14674777.1| ribokinase [Staphylococcus epidermidis NIHLM087]
gi|394236039|gb|EJD81585.1| ribokinase [Staphylococcus epidermidis NIHLM095]
gi|394237175|gb|EJD82668.1| ribokinase [Staphylococcus epidermidis NIHLM087]
Length = 307
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 158/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E ++G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLELGISAVLITLGEQGTYYAYQ 234
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
+ ++PA V IDTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 235 EQ----YKMVPACNVKAIDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|331084153|ref|ZP_08333259.1| ribokinase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330402008|gb|EGG81581.1| ribokinase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 307
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 161/298 (54%), Gaps = 11/298 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D + + ++P GET+ + + GGKGANQA KL +G VG+
Sbjct: 4 ILVVGSLNMDFVINVKKMPLSGETILGEDVNLVPGGKGANQAYAVGKLGGQVDMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ + L GV + + +++ G PTG+A + + G+NSII+V G N +
Sbjct: 64 DLYGRMLIENLQNVGVGISGIEIIQ--GTPTGNAFISVDEGGENSIIVVQGANNKLTTQM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D+ ++++K+A I+++Q EIP V V A+ +I D +P++ L
Sbjct: 122 I-DKHVDLIKRADIIIMQLEIPLEVVEYVKTLAQEK--LIILDPAPAQDDLPKQFLEGFT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+EL L G ++ E++ + + G+Q V+V LG G+ L ++ K
Sbjct: 179 IVKPNETELQTLIGKKLETKEELISGAEELLEKGIQTVIVTLGGDGALLVMKD----KTE 234
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
A +V +DTT AGD FTA+ A+ +GK+ E ++F + + + V KGA S+P
Sbjct: 235 YFKAQKVTAVDTTAAGDCFTAALALALSKGKAYAEAIQFGNSVSGIVVTRKGAQTSIP 292
>gi|237807350|ref|YP_002891790.1| ribokinase [Tolumonas auensis DSM 9187]
gi|237499611|gb|ACQ92204.1| ribokinase [Tolumonas auensis DSM 9187]
Length = 307
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 156/303 (51%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + R PK GET+ GGKGANQA + F+ VG
Sbjct: 5 LVVLGSVNADHVLSVPRFPKPGETLVGSGYHIAYGGKGANQAVAAGRTGADIAFIACVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + + + G+ D V+ G TG A++ + +DG+N I I G N P +
Sbjct: 65 DDIGARMREQFAADGI--DTQAVMAIEGTTTGVAMIWVSADGENCIGISAGANAELTPAR 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
L ++ A ++L+Q E P S A+ AR AG VI + A +P+ LL +D
Sbjct: 123 L-QPHLPLIADADVLLMQLESPLSTVEAAAQTARIAGTKVILNPAPAQA-LPESLLRLVD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ D+ + +A H G+ VL+ LGA+G + +G K
Sbjct: 181 VITPNETEAQALTGVVVDTEQDAQKAADVLHTYGISTVLITLGARGVWVSEQG----KGE 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + +EG + +RFA AAA++ V GA PS+P R
Sbjct: 237 LIPGFRVQALDTTAAGDTFNGALVTAELEGLPLRQAIRFAHAAAAISVTRSGAQPSIPVR 296
Query: 368 KSV 370
V
Sbjct: 297 SEV 299
>gi|418412248|ref|ZP_12985512.1| ribokinase [Staphylococcus epidermidis BVS058A4]
gi|410889737|gb|EKS37539.1| ribokinase [Staphylococcus epidermidis BVS058A4]
Length = 307
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 158/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E ++G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLELGISAVLITLGEQGTYYAYQ 234
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
+ ++PA V IDTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 235 EQ----YKMVPACNVKAIDTTAAGDTFIGAFLSELNKDLSNIESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|148270905|ref|YP_001245365.1| ribokinase [Thermotoga petrophila RKU-1]
gi|281413185|ref|YP_003347264.1| ribokinase [Thermotoga naphthophila RKU-10]
gi|147736449|gb|ABQ47789.1| ribokinase [Thermotoga petrophila RKU-1]
gi|281374288|gb|ADA67850.1| ribokinase [Thermotoga naphthophila RKU-10]
Length = 297
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 164/307 (53%), Gaps = 19/307 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGED 130
VVGS+N DI +++D K GET A GGKGANQA AK+ YF+ +G D
Sbjct: 4 VVGSSNIDIVLKVDHFTKPGETQKALEMNIFPGGKGANQAVTVAKIGERGCYFLTCLGND 63
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
++++D G++ + V PTG A + + +GQN III G N E
Sbjct: 64 DYARILSDNFERHGIK-GCLQV----NAPTGRAFIEVDRNGQNRIIIFSGANAELKKEMI 118
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
D + + ++ I+LLQ EI ++ AK R G+ VIFD + I +E+ ++
Sbjct: 119 ---DWKALSESEILLLQNEISFETTLECAK--RFNGI-VIFDPAPVQG-ISKEIFQHVNY 171
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
L+PNE E+ L+ + I +A + ++GV+ V+VKLG+KG AL V K +
Sbjct: 172 LTPNEEEIEALSREVFGEFLSIEKAAERFLELGVENVIVKLGSKG-ALVVNKHK---KKH 227
Query: 311 IPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
PA +V +DTT AGD F +FAVG EG+S E+ + F AAA++ V GA S+P R+
Sbjct: 228 FPAFKVKAVDTTAAGDVFNGAFAVGLAEGRSLEDAVIFGMAAAAISVTRLGAQSSIPSRQ 287
Query: 369 SVLNLLQ 375
V L+
Sbjct: 288 EVEEFLK 294
>gi|331092242|ref|ZP_08341070.1| ribokinase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401674|gb|EGG81253.1| ribokinase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 288
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 153/295 (51%), Gaps = 9/295 (3%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
DI +E R+PK GET++ K GGKGANQA KL +G VG+D+ G +
Sbjct: 1 MDIVLETPRIPKAGETISGKNIMQAPGGKGANQAYAIGKLGGKVEMIGAVGDDSFGYKLK 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
L GV + V G PTG A + + +G+NSII++ GTN + ++L+
Sbjct: 61 ANLESVGVS--TVGVETFSGEPTGQAYIAVDEEGENSIILIAGTNGMVTKDMI-KKNLKK 117
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++++ I+++Q EIP V V K A G VI D IP ID + PNE+E
Sbjct: 118 IQESDIIIMQLEIPLEVVEYVKKLAVGLGKTVIVDPAPAVPNIPDSFWKGIDYIKPNETE 177
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPA--AR 315
L L G + EQ+ E + GV+ V+V LG G LFV E K+ PA +
Sbjct: 178 LEILAGKEMKNLEQLKEGARIMLEKGVKNVVVTLGGDG-CLFVSAE---KEEFFPANKVK 233
Query: 316 VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
V+DTT AGD+FTA A+ +GK+ EE + F +++ V KGA S+P + +
Sbjct: 234 VVDTTAAGDSFTAGMALALSQGKTCEEAIAFGQKVSAIVVSRKGAQISIPAMEEI 288
>gi|329122385|ref|ZP_08250972.1| ribokinase [Haemophilus aegyptius ATCC 11116]
gi|327473667|gb|EGF19086.1| ribokinase [Haemophilus aegyptius ATCC 11116]
Length = 327
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 169/336 (50%), Gaps = 14/336 (4%)
Query: 45 HVIKCQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAG 104
+I C R +N ++ I L V+GS N D + + K GET+ + Q G
Sbjct: 3 QIILSHCVER-KNITIQDKI-MRKTLTVLGSINADHVISVPYFAKPGETLTGQNYQIAYG 60
Query: 105 GKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAV 164
GKGANQA A+L F+ +G D+ GK + +A G+ ++N V TG A
Sbjct: 61 GKGANQAVAAARLGAKVAFISCIGSDSIGKTMKNAFEQEGIDTTHINTVSQE--MTGMAF 118
Query: 165 VMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARS 224
+ + +NSI++ G N + E + + ++ +L+Q E P S A+ A+
Sbjct: 119 IQVAKSSENSIVLASGAN-AHLGEMVVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKK 177
Query: 225 AGVPVIFDAGGMDAP---IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK 281
GV V+ + AP + ELL+ IDI++PNE+E LTG+ + +A H
Sbjct: 178 NGVKVVLNP----APAQILSDELLSLIDIITPNETEAEILTGVAVTDEQSAVKAASVFHD 233
Query: 282 MGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSRE 341
G++ V++ LGAKG + +G+ I + + IDTT AGDTF F +E KS +
Sbjct: 234 QGIKTVMITLGAKGVFVSRKGKSRIIKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFD 291
Query: 342 ECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQYA 377
E +RF AAA++ V KGA S+P R+ L L++A
Sbjct: 292 EAIRFGQAAAAISVTKKGAQSSIPMRQETLEFLEHA 327
>gi|440680809|ref|YP_007155604.1| ribokinase [Anabaena cylindrica PCC 7122]
gi|428677928|gb|AFZ56694.1| ribokinase [Anabaena cylindrica PCC 7122]
Length = 304
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 163/311 (52%), Gaps = 17/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ RLP GET+ +T GGKGANQA AKL PT+ +G++G
Sbjct: 3 IIVFGSINIDLVTTTPRLPIAGETLLGETFFKTPGGKGANQAVALAKLGIPTHMIGRIGA 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + + L GV+ + N++ V +G A++ + G+N I+++ G N +
Sbjct: 63 DSFGEELIENLQVSGVQTN--NILITENVSSGVAIITVDHSGENHIVVIPGAN-----AQ 115
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+D+E ++ +A +LLQ EIP V ++ AK+AR A + VI D + +P EL
Sbjct: 116 VNQDDIERLTHLLPEATAILLQLEIPIDVVVKAAKSARKANITVILDPAPAQSQLPDELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE E +L G P + E ++A + GV+ ++KLGAKG V
Sbjct: 176 PLIDIITPNEIEASQLVGFPVNGEETAAKAATILLQRGVKCAVIKLGAKG----VYCATT 231
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ IPA + +DT AGD F A A E + + AAA +L GA S
Sbjct: 232 DQNFFIPAFPVQAVDTVAAGDAFNAGLAAALFHKLPLREAVIWGAAAGALATTKLGAQSS 291
Query: 364 MPDRKSVLNLL 374
+PDR ++ L
Sbjct: 292 LPDRMTLEKFL 302
>gi|408672219|ref|YP_006871967.1| ribokinase [Emticicia oligotrophica DSM 17448]
gi|387853843|gb|AFK01940.1| ribokinase [Emticicia oligotrophica DSM 17448]
Length = 301
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 159/307 (51%), Gaps = 18/307 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS+N D+ V+ ++LP GET+ T AGGKGANQA AKL FV +VG+
Sbjct: 5 IYVIGSSNTDMVVKSEKLPVAGETILGGTFLMNAGGKGANQAVAAAKLGANVTFVSKVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK G+ ++ V D P+G A++++ + G+NSI + G N + +
Sbjct: 65 DIFGKQAIQGFQKEGINTNF--VFTDAENPSGVALILVDAKGENSIAVASGANGNLQISE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN-- 246
+ +E + IVLLQ EIP +V + K + + G VI + P P + LN
Sbjct: 123 VA-KAIEQISANDIVLLQLEIPIPTVEFAIKKCSEN-GAKVILN------PAPAQKLNEN 174
Query: 247 ---FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
F++I++PNE+E LTG+ E A H+ GV+ +++ LG++G+ L+
Sbjct: 175 IFKFLEIITPNETEAELLTGIKVTDLESAKHAAEVLHQKGVKNIIITLGSRGAYLYNTNT 234
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ + P + +DTT AGD F + AV EG E+ + FA AA++ V GA S
Sbjct: 235 NLLISA--PQVQAVDTTAAGDVFNGALAVALSEGNEMEQAINFACKAAAISVTRMGAQAS 292
Query: 364 MPDRKSV 370
P R +
Sbjct: 293 APLRSEI 299
>gi|339481054|ref|ZP_08656713.1| ribokinase RbsK [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 322
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 160/306 (52%), Gaps = 13/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ +I RLP GET++ + T GGKGANQA A+ FVG VG
Sbjct: 4 VVVIGSLNIDLITKIGRLPLQGETMSVREQVTSFGGKGANQAVAAARQGSEVTFVGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG L + DY+ V K TG AV++L+ +G N+I++ GG N
Sbjct: 64 DENGDAFKKLLRQENINTDYI-VSKQQ--STGSAVILLEENGHNTILVNGGANARLDVAD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +V++KA IV+ Q E+P I+ K A++AG + + + + QEL+N+ D
Sbjct: 121 IQNAK-QVIEKADIVVAQLEVPSETVIEAFKIAKNAGAMTVLNPAPVRKQLDQELINYTD 179
Query: 250 ILSPNESELGRLTGM-PTDSYEQISEAVV-KCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
++ PNE+E L PT I + + K G++ V++ LG KG V K
Sbjct: 180 LIVPNETEAAALANENPTTEVAVIEKTIYHKLQGQGLENVIITLGDKGVYYKVLN----K 235
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++P +V +DTT AGDTF + A + + EE L ++ A+S+ V GAI S+
Sbjct: 236 SQLLPIFKVQTLDTTAAGDTFIGTIAANLHADYANLEETLLRSSLASSIAVSRAGAIASI 295
Query: 365 PDRKSV 370
P+ K +
Sbjct: 296 PNSKDI 301
>gi|406600150|ref|YP_006745496.1| ribokinase [Leuconostoc gelidum JB7]
gi|406371685|gb|AFS40610.1| ribokinase [Leuconostoc gelidum JB7]
Length = 303
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 167/307 (54%), Gaps = 17/307 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA A+ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLVGETMALTDVTTAPGGKGANQAVAAARQGANVSFIGSVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + L GV ++ V + VPTG A +MLQ +G N+I+I GG N +
Sbjct: 65 DSNGQFMRATLLTNGVNVNA--VTTNSEVPTGSAYIMLQENGANTILIHGGANQAL---T 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D V+ KA ++ Q E+P V + K A++ V I + + EL++ D
Sbjct: 120 VADLDENVIAKADTLIAQFEVPLEVIVAAFKIAKANNVQTILNPAPAVYDLTPELMHVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYE----QISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
I+ PNE+E LTG+ ++ E ++S A++ GV + ++ LG GS FV ++
Sbjct: 180 IILPNETEAQLLTGITVENNEAVLNRVSNAIL---SKGVPRSIITLGDAGS--FV-ADRD 233
Query: 306 IKQSIIP-AARVIDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ + P +DTTGAGDTF + A V + + EE ++ A+ A+++ V GAIPS
Sbjct: 234 KRWWVKPNKVDAVDTTGAGDTFIGTLASVIDADFNNLEETVKRASIASAIAVTRAGAIPS 293
Query: 364 MPDRKSV 370
+P R V
Sbjct: 294 IPTRDEV 300
>gi|384446175|ref|YP_005660393.1| ribokinase [Brucella melitensis NI]
gi|349744172|gb|AEQ09714.1| ribokinase [Brucella melitensis NI]
Length = 306
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 12/312 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V GS N D+ + LP+ +TV A GGKGANQA AKL FVG VG
Sbjct: 3 IFVFGSVNVDVSARMAALPRPEQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGAVGH 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N C
Sbjct: 63 DAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGANARCSSAD 120
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
+ +G + + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 121 IDAYGAD----IAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 177 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 234
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 235 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAAAP 294
Query: 366 DRKSVLNLLQYA 377
+ V L+ A
Sbjct: 295 TAREVEELIGRA 306
>gi|326790420|ref|YP_004308241.1| ribokinase [Clostridium lentocellum DSM 5427]
gi|326541184|gb|ADZ83043.1| ribokinase [Clostridium lentocellum DSM 5427]
Length = 308
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 158/305 (51%), Gaps = 11/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D +E+D P GET+ ++ + GGKGANQA + L +G VG+
Sbjct: 6 ILVIGSLNMDWIIEVDHTPIAGETLLGHFAKEVPGGKGANQAYAASSLGGHVTMLGAVGK 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D +G+ + +L GV + + G +G A++ L G NSI+++ N + E
Sbjct: 66 DPSGEKLLQSLQKAGVNTSPIQANSETG--SGMAIIYLNKMGNNSIVVLPNANNTVTKEV 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D E+ K A I++LQ EIP + A A +I + + +P E+L+ ID
Sbjct: 124 IMAHD-ELFKIADIIMLQLEIPLEAVYEAAALAHKYHKTIILNPAPAISHLPNEILSKID 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKM---GVQQVLVKLGAKGSALFVEGEKPI 306
++PNE+EL LT P + + +A++ + GV+ V+ LG KG+ L E
Sbjct: 183 YITPNETELSTLTNQPVTT---VDDAIIAAQTLLLSGVKHVITTLGEKGAILVTLEEA-- 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + + IDTT AGD+F + AV EGKS EE + F A++ V +GA S+P
Sbjct: 238 RHFPALSVKAIDTTAAGDSFNGALAVYLAEGKSIEEAIVFGNQVAAITVTREGAQSSIPF 297
Query: 367 RKSVL 371
R+ +L
Sbjct: 298 REEIL 302
>gi|433655497|ref|YP_007299205.1| ribokinase [Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293686|gb|AGB19508.1| ribokinase [Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 308
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 156/304 (51%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N DI + +D +P +GET+ AKT + GGKGANQA AKL +G+ G
Sbjct: 4 VIVVGSINMDIILRVDHIPSIGETIIAKTCKKSGGGKGANQAVASAKLGGNVCMIGRAGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK++ + L GV ++ +V D TG A + + G+N+III+ G N +
Sbjct: 64 DENGKILYNDLKKYGVNVE--GIVLDDCAQTGSAYINVSDKGENNIIILQGANNRLSISQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + A +LQ EIP + VA+ G+ VI + AP + + + +
Sbjct: 122 IKKYEY-LFDDANYCILQLEIPIATVEYVAEYCYKRGIKVILNP----APAITLSENIYH 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+I ++ PNE+EL LT E + EA GV+ V+ LG KGS F+ +
Sbjct: 177 YIYLIVPNETELSLLTRKTITDKESLIEASRFLLNKGVKNVITTLGEKGS--FLMNNEVT 234
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
K +DTT AGDTF + A E KS +E + +A A+++ V +GA S+PD
Sbjct: 235 KYYPSIKVHAVDTTAAGDTFIGALATLLSENKSIDESIIYATYASAIAVTREGAQVSIPD 294
Query: 367 RKSV 370
R V
Sbjct: 295 RDKV 298
>gi|373116309|ref|ZP_09530464.1| ribokinase [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669562|gb|EHO34662.1| ribokinase [Lachnospiraceae bacterium 7_1_58FAA]
Length = 310
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 9/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGSAN D + + + P++GET+ ++ + GGKGANQA +L T F+ VG+
Sbjct: 7 ILVVGSANVDFVIGVRQAPELGETILCRSFRKTCGGKGANQAYACGRLGGDTAFLNAVGD 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L V + V GV TG AVV + G NSII++ G N C +
Sbjct: 67 DPLGGELVRNLQQANVDTRAIRTVD--GVSTGMAVVCVDEKGNNSIIVIPGANNLCDVD- 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +++ IVLLQ EIP + A VI + +P E+ +D
Sbjct: 124 YLRRNRARFEESDIVLLQMEIPFESVCYAVELASGLHKTVILNPAPAPDSLPDEVYAGLD 183
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV--EGEKPIK 307
L+PNESE LTG PTD E+++ + G + +++ LG++G AL V EG +
Sbjct: 184 YLTPNESEFKHLTGCPTDEVEELAVHCKPLLEKGTRNIIITLGSRG-ALHVNREGHTLYR 242
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P + +DTT AGDTF A+ A +G+S EE + FA A++L V GA S+P
Sbjct: 243 P---PEVQAVDTTAAGDTFNAALARELADGRSTEEAIVFANMASALAVSRVGAQDSIPSY 299
Query: 368 KSVLNL 373
+ VL+
Sbjct: 300 EEVLDF 305
>gi|375262957|ref|YP_005025187.1| ribokinase [Vibrio sp. EJY3]
gi|369843384|gb|AEX24212.1| ribokinase [Vibrio sp. EJY3]
Length = 306
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 161/306 (52%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNSDIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DISAVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL
Sbjct: 122 I-EPDLERIRRAEYLLMQLETPICAIEKAARVAKYAKTNVILNP----APARELSDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDNDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF +F G +EG S E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVDATDTTAAGDTFNGAFVTGLLEGLSLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV 370
P R+ V
Sbjct: 293 PTREEV 298
>gi|157364756|ref|YP_001471523.1| ribokinase [Thermotoga lettingae TMO]
gi|157315360|gb|ABV34459.1| ribokinase [Thermotoga lettingae TMO]
Length = 308
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 164/310 (52%), Gaps = 21/310 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ + +D GET + + + +GGKGANQA KL F+ VG+
Sbjct: 2 IAVIGSNNVDLVLTVDHFTNPGETQSCISFERFSGGKGANQAIACKKLGATVRFLTCVGD 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ I S G+ ++ V+ P G A++ + G+N III G N PE
Sbjct: 62 DENGQFILQNFSENGIA-EFAVKVRS---PNGFAMIEVTKTGENRIIIYAGANGFLTPET 117
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD---AGGMDAPIPQELLN 246
E+ + +A ++LLQ EIP + + AK ++ G VIFD A G+D+ I
Sbjct: 118 V-RENAPDLLEASVLLLQNEIPFQTSFEAAKLFKANGKMVIFDPAPAHGIDSSI----FK 172
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE-GEKP 305
F+DI++PNESEL LT + + + EA+ + K G + VL+K+G KG E GE
Sbjct: 173 FVDIITPNESELIALTQISS-----VREAIDRLLKSGCKNVLLKMGEKGCIFKGEYGEFY 227
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
++ + A +DTT AGD F A+FAVGF L FA+A+A++ V KGA S+P
Sbjct: 228 VESFKVNA---VDTTAAGDIFNAAFAVGFCRFGDIYRALVFASASAAISVTRKGAQSSIP 284
Query: 366 DRKSVLNLLQ 375
+ V L
Sbjct: 285 FYEEVAGFLN 294
>gi|222100590|ref|YP_002535158.1| Ribokinase [Thermotoga neapolitana DSM 4359]
gi|221572980|gb|ACM23792.1| Ribokinase [Thermotoga neapolitana DSM 4359]
Length = 325
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 164/334 (49%), Gaps = 17/334 (5%)
Query: 45 HVIKC--QCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTL 102
H C C+ +N K + VVGS+N DI +++D K GET A
Sbjct: 4 HFPSCYHSCENDFENDFIKTQGRMFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVF 63
Query: 103 AGGKGANQAACGAKLSHP-TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTG 161
GGKGANQA AK+ FV +G D L+ + G+ Y+ V +PTG
Sbjct: 64 PGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKLGIT-GYIRV----SLPTG 118
Query: 162 HAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKA 221
A + + GQN III G N E D + ++ I+LLQ EIP ++ AK
Sbjct: 119 RAFIEVDKTGQNRIIIFPGANAELKKELI---DWNTLSESDILLLQNEIPFETTLECAK- 174
Query: 222 ARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHK 281
R G+ VIFD I +E+ ++D L+PNE E+ L+ + + +A K +
Sbjct: 175 -RFNGI-VIFDPAPAQG-INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLE 231
Query: 282 MGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSRE 341
+GV+ V+VKLG KG L + EK K + +DTT AGD F +FAV EGK+ E
Sbjct: 232 LGVKNVIVKLGDKGVLLVNKNEK--KHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPE 289
Query: 342 ECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
E + F AAA++ V GA S+P R+ V L+
Sbjct: 290 EAVIFGTAAAAISVTRLGAQSSIPAREEVEAFLK 323
>gi|300769081|ref|ZP_07078970.1| ribokinase [Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|380034137|ref|YP_004891128.1| ribokinase [Lactobacillus plantarum WCFS1]
gi|418273607|ref|ZP_12889235.1| ribokinase [Lactobacillus plantarum subsp. plantarum NC8]
gi|300493321|gb|EFK28500.1| ribokinase [Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|342243380|emb|CCC80614.1| ribokinase [Lactobacillus plantarum WCFS1]
gi|376011221|gb|EHS84545.1| ribokinase [Lactobacillus plantarum subsp. plantarum NC8]
Length = 306
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 162/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + ++ +PK GET+ K + GGKGANQA + T+F+G VG+
Sbjct: 4 VTVIGSINLDRTIRVENMPKPGETIHTKEIFSAGGGKGANQAVAAQRSGANTHFIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK + D L+ +++ + K TG A V + G+N I+I GG NM+ P
Sbjct: 64 DAAGKTMLDLLTQE--KINLAGITKMTNQSTGQAYVTVDDAGENQIMIHGGANMAFTPAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++ + V+ Q E ++ K A++AGV I + +P ELL D
Sbjct: 122 V-EAHRDIIETSDFVVAQFESAVDSTVEAFKIAQAAGVRTILNPAPAMEKVPAELLAVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H +G+ V++ +G+KG+ ++G +
Sbjct: 181 MIVPNETETETLTGIAITDEVSMLKASAALHALGISAVIITIGSKGAFYDIDG----RHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + S E+ +R+ A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVEAVDTTSAGDTFIGAMSSVLNKDFSNLEDAIRYGNRASSIAVQRFGAQPSIPY 296
Query: 367 RKSV 370
+ +
Sbjct: 297 KNEI 300
>gi|420177097|ref|ZP_14683488.1| ribokinase [Staphylococcus epidermidis NIHLM057]
gi|420180570|ref|ZP_14686782.1| ribokinase [Staphylococcus epidermidis NIHLM053]
gi|394249027|gb|EJD94254.1| ribokinase [Staphylococcus epidermidis NIHLM053]
gi|394251691|gb|EJD96775.1| ribokinase [Staphylococcus epidermidis NIHLM057]
Length = 307
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 160/313 (51%), Gaps = 28/313 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFV 300
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ + +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGTYSAYQ 234
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQV 357
E K +IPA V +DTT AGDTF +F + S E +R A A+SL VQ
Sbjct: 235 EQYK-----MIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQR 289
Query: 358 KGAIPSMPDRKSV 370
KGA S+P RK V
Sbjct: 290 KGAQASIPTRKEV 302
>gi|387900228|ref|YP_006330524.1| ribokinase [Bacillus amyloliquefaciens Y2]
gi|387174338|gb|AFJ63799.1| ribokinase [Bacillus amyloliquefaciens Y2]
Length = 282
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 149/305 (48%), Gaps = 32/305 (10%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V DR PK GETV QT+ GGKGANQA ++L Y VG+ G D GK I
Sbjct: 1 MDLVVTSDRRPKAGETVLGTDFQTVPGGKGANQAVAASRLGANVYMVGKAGNDGYGKAII 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L GV DYM V T H V+ ++G NSI++V G N P+ + L
Sbjct: 61 ENLKANGVNTDYMETVTHKKSGTAHIVL---AEGDNSIVVVKGANDDISPD-YAKSALAK 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
+ IVL+Q+EIP+ +V R+ +PVI + P+ Q + L+PNE E
Sbjct: 117 LPGIDIVLIQQEIPEETVEEVCSYCRAQQIPVILNPAPAR-PLKQSTIEDAAYLTPNEHE 175
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS------II 311
L P + E EA+ G G EG++ ++ S ++
Sbjct: 176 ASIL--FPDRTKE---EALA--------------GYPGKLFITEGKQGVRYSDGTAERLV 216
Query: 312 PA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
PA A +DTTGAGDTF A+ AV EG+ E+ L FA AASL VQ GA MP RK
Sbjct: 217 PAFPAEAVDTTGAGDTFNAALAVALAEGRDIEQALLFANRAASLSVQHFGAQGGMPARKE 276
Query: 370 VLNLL 374
V LL
Sbjct: 277 VEELL 281
>gi|302337322|ref|YP_003802528.1| PfkB domain-containing protein [Spirochaeta smaragdinae DSM 11293]
gi|301634507|gb|ADK79934.1| PfkB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 349
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 168/320 (52%), Gaps = 21/320 (6%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P ++VVGS D+ V + P GETV K+ +T AGGKGANQA ++L G+V
Sbjct: 20 PRILVVGSFVMDLIVTTEFFPCSGETVLGKSFRTAAGGKGANQAVQASRLGAEVKMSGKV 79
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSD----GQNSIIIVGGTNM 183
G D GK + + G+ D +V D V + V+L+ +N II+V G NM
Sbjct: 80 GNDEFGKTLIASCKSSGI--DVESVAVDDLVSSAVGDVILEESRGGGAKNRIIVVPGANM 137
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ E+ + ++++ +V+LQ EIP ++N Q+A+ A GVPV+ ++ AP+ E
Sbjct: 138 TIRVEEIAFIE-RILERYDMVMLQLEIPMAINEQIARYAAEKGVPVMLNSAP-SAPLSDE 195
Query: 244 LLNFIDILSPNESELGRLTGMPT---------DSYEQISEAVVKCHKMGVQQVLVKLGAK 294
LL + + PNE E +TG+ D ++E ++ K GV+ VLV LG+
Sbjct: 196 LLGCLAYICPNEHEAEAITGVAIRKNDGEANKDDIYSMAEVLL---KKGVENVLVTLGSG 252
Query: 295 GSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLC 354
G+AL V ++ Q I V D T AGD+F SF G G E+ L FA+ AA+L
Sbjct: 253 GAAL-VNRDEFFLQPCIDVVEVKDPTAAGDSFVGSFVTGVCAGMDHEQALVFASYAATLA 311
Query: 355 VQVKGAIPSMPDRKSVLNLL 374
V GA PS+P V++LL
Sbjct: 312 VSKTGAQPSLPYLTEVIDLL 331
>gi|390573108|ref|ZP_10253296.1| ribokinase [Burkholderia terrae BS001]
gi|389935029|gb|EIM96969.1| ribokinase [Burkholderia terrae BS001]
Length = 309
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 146/301 (48%), Gaps = 4/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ RLP+ GET+A +AGGKG NQA A+L +G VG
Sbjct: 10 VTVVGSLNMDLVARAPRLPQPGETLAGHAFAQVAGGKGGNQAVAAARLGAQVSMLGCVGA 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG + L G+ D + PTG A++++ QN+I+I+ G+N P
Sbjct: 70 DANGAQLRAGLEAEGI--DCTALETSATAPTGVALIIVDDGSQNAIVIIAGSNGEVTPAT 127
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +V+ Q E P + AAR G VI + P+P + L ID
Sbjct: 128 LARHEAALAAAQ-VVICQLETPPAAVHAALAAARRLGKTVILNPAPATGPLPADWLPLID 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P S + + A + G + V+V +GA+G + G+ +
Sbjct: 187 YLIPNELEAATLTGLPVTSPAEANAAADALRRAGARNVIVTIGAQG-VVAALGKAAPQHF 245
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF FA G + +RFA AAS+ V GA PS+P R
Sbjct: 246 DAPRVKAVDTTAAGDTFIGGFAAQLARGVDVADAIRFAQRAASISVTRAGAQPSIPTRAE 305
Query: 370 V 370
V
Sbjct: 306 V 306
>gi|420211325|ref|ZP_14716685.1| ribokinase [Staphylococcus epidermidis NIHLM001]
gi|394280941|gb|EJE25209.1| ribokinase [Staphylococcus epidermidis NIHLM001]
Length = 307
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 159/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V IDTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAIDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQSSIPTRKEV 302
>gi|27469004|ref|NP_765641.1| ribokinase [Staphylococcus epidermidis ATCC 12228]
gi|417645675|ref|ZP_12295570.1| ribokinase [Staphylococcus epidermidis VCU144]
gi|417657175|ref|ZP_12306845.1| ribokinase [Staphylococcus epidermidis VCU028]
gi|418607845|ref|ZP_13171064.1| ribokinase [Staphylococcus epidermidis VCU057]
gi|418610961|ref|ZP_13174065.1| ribokinase [Staphylococcus epidermidis VCU065]
gi|418629529|ref|ZP_13192030.1| ribokinase [Staphylococcus epidermidis VCU127]
gi|418665094|ref|ZP_13226548.1| ribokinase [Staphylococcus epidermidis VCU081]
gi|420169507|ref|ZP_14676091.1| ribokinase [Staphylococcus epidermidis NIHLM070]
gi|420173862|ref|ZP_14680349.1| ribokinase [Staphylococcus epidermidis NIHLM067]
gi|420201503|ref|ZP_14707121.1| ribokinase [Staphylococcus epidermidis NIHLM018]
gi|420210469|ref|ZP_14715895.1| ribokinase [Staphylococcus epidermidis NIHLM003]
gi|420235343|ref|ZP_14739888.1| ribokinase [Staphylococcus epidermidis NIH051475]
gi|27316553|gb|AAO05728.1|AE016751_23 ribokinase [Staphylococcus epidermidis ATCC 12228]
gi|329731394|gb|EGG67758.1| ribokinase [Staphylococcus epidermidis VCU144]
gi|329734986|gb|EGG71283.1| ribokinase [Staphylococcus epidermidis VCU028]
gi|374403030|gb|EHQ74040.1| ribokinase [Staphylococcus epidermidis VCU065]
gi|374403341|gb|EHQ74347.1| ribokinase [Staphylococcus epidermidis VCU057]
gi|374409526|gb|EHQ80315.1| ribokinase [Staphylococcus epidermidis VCU081]
gi|374833595|gb|EHR97271.1| ribokinase [Staphylococcus epidermidis VCU127]
gi|394239214|gb|EJD84661.1| ribokinase [Staphylococcus epidermidis NIHLM067]
gi|394243936|gb|EJD89293.1| ribokinase [Staphylococcus epidermidis NIHLM070]
gi|394272504|gb|EJE16959.1| ribokinase [Staphylococcus epidermidis NIHLM018]
gi|394276187|gb|EJE20534.1| ribokinase [Staphylococcus epidermidis NIHLM003]
gi|394303298|gb|EJE46725.1| ribokinase [Staphylococcus epidermidis NIH051475]
Length = 307
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 159/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQT-LAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V IDTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAIDTTAAGDTFIGAFLSELNKDLSNIESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|410455081|ref|ZP_11308965.1| ribokinase [Bacillus bataviensis LMG 21833]
gi|409929630|gb|EKN66706.1| ribokinase [Bacillus bataviensis LMG 21833]
Length = 292
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 163/303 (53%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V +R P GET+ ++ +T+ GGKGANQA A+L + VG VGE
Sbjct: 4 VTVIGSSSIDLVVTAERRPDKGETILGESFKTVPGGKGANQAVAAARLGAEVFMVGCVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I D GV DY+ V T H + ++G NSII+V G N PE
Sbjct: 64 DGFGKEILDNFKENGVLTDYVEPVTHSESGTAHITL---AEGDNSIIVVKGANNHVTPEF 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
G + L+V++ + IVL+Q+EIP+ V++ + VP++ + PI ++++
Sbjct: 121 VG-KALDVIRTSDIVLIQQEIPEETVEYVSELCHAHHVPLLLNP-APSRPISKDVIAKAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L D +E ++E +K+ + + K + +GE+ +
Sbjct: 179 YLTPNELEAAVLF-QNKDIHEALAE---NPNKLFITE------GKNGVRYHDGEQEV--- 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++P V +DTTGAGDTF A+FAV EG+ +E +RFA AASL V GA MP R
Sbjct: 226 LVPTYTVEAVDTTGAGDTFNAAFAVALAEGQGLKEAVRFANRAASLSVTKFGAQGGMPTR 285
Query: 368 KSV 370
V
Sbjct: 286 TEV 288
>gi|418575537|ref|ZP_13139687.1| ribokinase [Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379325939|gb|EHY93067.1| ribokinase [Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 287
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 163/311 (52%), Gaps = 38/311 (12%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GSA+ D+ V+ D LP+ GETV + T GGKGANQA A+LS+ Y +G VG+
Sbjct: 4 IIVIGSASIDLVVKTDILPEAGETVMGTSFFTNPGGKGANQAVAAARLSNEVYMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA GK I + L V YM+++ + T H + + + D N II+V N P
Sbjct: 64 DAYGKQILENLKDNHVDTTYMDIIDNEKSGTAH-ITLFEDD--NRIIVVPAANNYITPDI 120
Query: 188 -----EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP--- 239
E FG++D I+LLQ EIP++ V A G+ VI + AP
Sbjct: 121 VLPKLENFGEDD--------IILLQHEIPEATVQSVVTYAAKHGIKVILNP----APYRE 168
Query: 240 IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF 299
+ +E++ + ++PNESE L ++ E +K + +++++ GAKG+ +
Sbjct: 169 LDKEVIEKVTWITPNESESELL-------FDHQVEQALKAYP---RKLIITQGAKGALFY 218
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
+ ++ I+ VIDTTGAGDTF + AV +E KS E+ + FA A S V G
Sbjct: 219 SDTQQLIEGY---KKEVIDTTGAGDTFNGALAVALIENKSLEDAVNFANLAGSFSVTGLG 275
Query: 360 AIPSMPDRKSV 370
A +MP RK +
Sbjct: 276 AQSAMPYRKDL 286
>gi|339448855|ref|ZP_08652411.1| ribokinase [Lactobacillus fructivorans KCTC 3543]
Length = 544
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 18/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GS N D + +D+ GET+A + Q + GGKGANQA A+ T F+ ++G
Sbjct: 5 VVVIGSTNVDKVLNVDKYALPGETLAVENHQESHGGGKGANQAIAAARSGADTTFITKLG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D + K + + G+ +D +V+ TG A + + S GQNSI + GG NM+ P
Sbjct: 65 DDEDAKFMIEGFKKDGMNID--SVITTQARQTGQAYITVDSTGQNSIYVYGGANMAMTPA 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
D+ + +K A + Q EIP I+ K A+ V I + AP +P+ELL
Sbjct: 123 DV-DQHEDAIKNADRAIAQLEIPVPTIIEAFKIAKKNEVQTILNP----APAKKLPEELL 177
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI++PNE+E LTG+ + + + K+G++ V++ +G KGS P
Sbjct: 178 QLTDIITPNETEAEALTGIKVIDDDSMMKNAEYFFKLGIRMVIITVGDKGSFYAT----P 233
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIP 362
+ IPA +V +DTT AGDTF + A + + + + +A A+SL VQV GA
Sbjct: 234 ASHAFIPAFKVKAVDTTAAGDTFIGALASRLDLNSANIRDAMLYANHASSLTVQVAGAQN 293
Query: 363 SMPDRKSVLNLL 374
S+P K VL+++
Sbjct: 294 SIPYEKDVLDVI 305
>gi|418613680|ref|ZP_13176682.1| ribokinase [Staphylococcus epidermidis VCU118]
gi|374823065|gb|EHR87073.1| ribokinase [Staphylococcus epidermidis VCU118]
Length = 307
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVIAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V +DTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|417910551|ref|ZP_12554270.1| ribokinase [Staphylococcus epidermidis VCU105]
gi|418623106|ref|ZP_13185831.1| ribokinase [Staphylococcus epidermidis VCU123]
gi|420188492|ref|ZP_14694501.1| ribokinase [Staphylococcus epidermidis NIHLM039]
gi|341655511|gb|EGS79236.1| ribokinase [Staphylococcus epidermidis VCU105]
gi|374824372|gb|EHR88331.1| ribokinase [Staphylococcus epidermidis VCU123]
gi|394254857|gb|EJD99821.1| ribokinase [Staphylococcus epidermidis NIHLM039]
Length = 307
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 157/308 (50%), Gaps = 18/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLATDTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSAT 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
+ ++ A V+ Q E+P Q K AR + + + AP +P+ LL
Sbjct: 124 DV-EMSVDAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELPKSLL 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ + ++
Sbjct: 179 ELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCAYQEQ 236
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIP 362
K +IPA V IDTT AGDTF +F + S E +R A A+SL VQ KGA
Sbjct: 237 YK--MIPACNVKAIDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRKGAQA 294
Query: 363 SMPDRKSV 370
S+P RK V
Sbjct: 295 SIPTRKEV 302
>gi|389685313|ref|ZP_10176637.1| ribokinase [Pseudomonas chlororaphis O6]
gi|388550966|gb|EIM14235.1| ribokinase [Pseudomonas chlororaphis O6]
Length = 305
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 157/304 (51%), Gaps = 6/304 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VVVGS N D+ +RLP+ GET+ ++ T++GGKGANQA ++L +G
Sbjct: 2 PAKVVVVGSLNMDLVTRAERLPRAGETLIGQSFATVSGGKGANQAVAASRLGAQVSMIGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DA G+ + AL ++D V G +G A++++ QN+I+IV G N
Sbjct: 62 VGDDAYGEQLRSAL--LAEQIDCQAVTAVPG-SSGVALIVVDDSSQNAIVIVAGGNGQLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
PE D +V++ A +++ Q E+P K R G VI + P+P +
Sbjct: 119 PEVVSGFD-KVLQAADVIICQLEVPLPTVGHSLKRGREMGKTVILNPAPASGPLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+P DS A + G +V++ LG++GS LF G
Sbjct: 178 SIDYLIPNESEAAALSGLPVDSLASAEAAAARLIAAGAGKVIITLGSQGS-LFANGTS-F 235
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF FA GKS E +RF AA+L V GA PS+P
Sbjct: 236 EHFPAPKVKAVDTTAAGDTFVGGFAAALAAGKSEAEAIRFGQVAAALSVTRPGAQPSIPT 295
Query: 367 RKSV 370
V
Sbjct: 296 LSDV 299
>gi|68249104|ref|YP_248216.1| ribokinase [Haemophilus influenzae 86-028NP]
gi|68057303|gb|AAX87556.1| ribokinase [Haemophilus influenzae 86-028NP]
Length = 306
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A G+ ++N V TG A + + +NSI++ G N + E
Sbjct: 65 DSIGKTMKNAFEQEGIDTTHINTVSQE--MTGMAFIQVAKSSENSIVLASGAN-AHLGEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVAVADEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|403374978|gb|EJY87457.1| Kinase, pfkB family protein [Oxytricha trifallax]
Length = 339
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 27/331 (8%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFV 124
N+ ++V+G + D++ +++R+P +GET+ S GGKGAN A KL + F+
Sbjct: 3 NSKKNIIVLGDSCEDLFFKVERMPLLGETLDTHGSYKSYGGKGANSALAIGKLGYDIEFL 62
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
QVG D G+ + + L V Y+ + V TG ++ G N +I VGG N +
Sbjct: 63 TQVGSDLQGRELIEELKEMKVGTQYIKTLDK--VNTGLGFILQLKTGDNVVISVGGANTA 120
Query: 185 CWPE--KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
P + + ++ A ++ LQR IPD VN+ AK A+ AGV VI D GGM + +
Sbjct: 121 YDPNMTTLYPDWVTAIQNANMICLQRLIPDYVNLVAAKIAKEAGVTVILDVGGMSSNVLP 180
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
EL ++D +SPNE+E+ R+ G D+ E K ++L+K G G+ L
Sbjct: 181 ELYQYLDYISPNETEIERMLGRKYDNNNLEEELHQFLKKYSHLKLLLKQGETGATLMYLK 240
Query: 303 EKPIKQSII----PAAR----------VIDTTGAGDTFTASFAVGFVEG---------KS 339
++ + +I PA + + DT GAGD FT +FA E ++
Sbjct: 241 DQQVDGEVIKIFSPAYKFADFEHLNLHLTDTAGAGDCFTGAFAAKLSEFHKDDKLNEIET 300
Query: 340 REECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+CL+F LCV G + S+P + V
Sbjct: 301 YTKCLQFGNRVGFLCVSKAGTMSSVPSIEEV 331
>gi|319897979|ref|YP_004136176.1| ribokinase [Haemophilus influenzae F3031]
gi|317433485|emb|CBY81868.1| ribokinase [Haemophilus influenzae F3031]
Length = 306
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 159/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A G+ Y+N V TG A + + +NSI++ G N + E
Sbjct: 65 DSIGKTMKNAFEQEGIDTTYINTVSQE--MTGMAFIQVAKSSENSIVLASGAN-AHLGEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLYGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHDKGIKTVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ A IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGFCMQA--IDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|417658615|ref|ZP_12308238.1| ribokinase, partial [Staphylococcus epidermidis VCU045]
gi|329737531|gb|EGG73780.1| ribokinase [Staphylococcus epidermidis VCU045]
Length = 309
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 157/308 (50%), Gaps = 18/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSAT 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
+ ++ A V+ Q E+P Q K AR + + + AP +P+ LL
Sbjct: 124 DV-EMSVDAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELPKSLL 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ + ++
Sbjct: 179 ELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCAYQEQ 236
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIP 362
K +IPA V IDTT AGDTF +F + S E +R A A+SL VQ KGA
Sbjct: 237 YK--MIPACNVKAIDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRKGAQA 294
Query: 363 SMPDRKSV 370
S+P RK V
Sbjct: 295 SIPTRKEV 302
>gi|148544509|ref|YP_001271879.1| ribokinase [Lactobacillus reuteri DSM 20016]
gi|184153873|ref|YP_001842214.1| ribokinase [Lactobacillus reuteri JCM 1112]
gi|227363063|ref|ZP_03847199.1| ribokinase [Lactobacillus reuteri MM2-3]
gi|325682830|ref|ZP_08162346.1| ribokinase [Lactobacillus reuteri MM4-1A]
gi|148531543|gb|ABQ83542.1| ribokinase [Lactobacillus reuteri DSM 20016]
gi|183225217|dbj|BAG25734.1| ribokinase [Lactobacillus reuteri JCM 1112]
gi|227071884|gb|EEI10171.1| ribokinase [Lactobacillus reuteri MM2-3]
gi|324977180|gb|EGC14131.1| ribokinase [Lactobacillus reuteri MM4-1A]
Length = 307
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 161/308 (52%), Gaps = 17/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D +++ R+P GET+AA + AGGKGANQA A+ T FVGQVG+
Sbjct: 5 VTIVGSLNVDTTMKVKRMPLPGETIAALSKTNAAGGKGANQAVAAARSGAETAFVGQVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK++ + L V D + D TG A ++L GQNSI++ GG N ++
Sbjct: 65 DAGGKMMINDLKNNNV--DTTGIHVDDQAGTGSAAILLDESGQNSILVYGGANQQLSVKE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D + + A V+ Q E P ++ + A+ GV I + AP I +LL
Sbjct: 123 VEDA-RDQIAAADFVIAQFETPQEATLRAFQIAKENGVKTILNP----APAHEINPDLLK 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D++ PNE+E LTG+ + + K +MGV+ +++ +GAKG+ +
Sbjct: 178 LTDLIIPNETESAALTGIIITDETSMLMSAAKFAQMGVRNLIITVGAKGAFYCTQD---- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ IPA +V +DTT AGDTF + + S E+ + +A A+SL VQ GA+PS
Sbjct: 234 GYNFIPAFKVNAVDTTAAGDTFIGALSSQLKPDMSNIEKAIVYAQRASSLAVQKLGALPS 293
Query: 364 MPDRKSVL 371
+P V+
Sbjct: 294 IPTYDEVV 301
>gi|57865524|ref|YP_189656.1| ribokinase [Staphylococcus epidermidis RP62A]
gi|293367210|ref|ZP_06613879.1| ribokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417909657|ref|ZP_12553392.1| ribokinase [Staphylococcus epidermidis VCU037]
gi|418603909|ref|ZP_13167281.1| ribokinase [Staphylococcus epidermidis VCU041]
gi|418613228|ref|ZP_13176243.1| ribokinase [Staphylococcus epidermidis VCU117]
gi|418616171|ref|ZP_13179097.1| ribokinase [Staphylococcus epidermidis VCU120]
gi|418623317|ref|ZP_13186030.1| ribokinase [Staphylococcus epidermidis VCU125]
gi|418627591|ref|ZP_13190166.1| ribokinase [Staphylococcus epidermidis VCU126]
gi|419770371|ref|ZP_14296450.1| ribokinase [Staphylococcus aureus subsp. aureus IS-250]
gi|419772854|ref|ZP_14298877.1| ribokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|420183795|ref|ZP_14689920.1| ribokinase [Staphylococcus epidermidis NIHLM049]
gi|420195066|ref|ZP_14700861.1| ribokinase [Staphylococcus epidermidis NIHLM021]
gi|420198347|ref|ZP_14704060.1| ribokinase [Staphylococcus epidermidis NIHLM020]
gi|420214391|ref|ZP_14719669.1| ribokinase [Staphylococcus epidermidis NIH05005]
gi|420217471|ref|ZP_14722623.1| ribokinase [Staphylococcus epidermidis NIH05001]
gi|420219400|ref|ZP_14724420.1| ribokinase [Staphylococcus epidermidis NIH04008]
gi|420223179|ref|ZP_14728080.1| ribokinase [Staphylococcus epidermidis NIH08001]
gi|420224170|ref|ZP_14729026.1| ribokinase [Staphylococcus epidermidis NIH06004]
gi|420228104|ref|ZP_14732858.1| ribokinase [Staphylococcus epidermidis NIH05003]
gi|420230239|ref|ZP_14734932.1| ribokinase [Staphylococcus epidermidis NIH04003]
gi|420232690|ref|ZP_14737321.1| ribokinase [Staphylococcus epidermidis NIH051668]
gi|57636182|gb|AAW52970.1| ribokinase [Staphylococcus epidermidis RP62A]
gi|291318628|gb|EFE59005.1| ribokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|341652735|gb|EGS76515.1| ribokinase [Staphylococcus epidermidis VCU037]
gi|374406370|gb|EHQ77269.1| ribokinase [Staphylococcus epidermidis VCU041]
gi|374816268|gb|EHR80474.1| ribokinase [Staphylococcus epidermidis VCU117]
gi|374821330|gb|EHR85394.1| ribokinase [Staphylococcus epidermidis VCU120]
gi|374829306|gb|EHR93111.1| ribokinase [Staphylococcus epidermidis VCU126]
gi|374830875|gb|EHR94634.1| ribokinase [Staphylococcus epidermidis VCU125]
gi|383357221|gb|EID34697.1| ribokinase [Staphylococcus aureus subsp. aureus IS-250]
gi|383358725|gb|EID36173.1| ribokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|394248034|gb|EJD93275.1| ribokinase [Staphylococcus epidermidis NIHLM049]
gi|394263528|gb|EJE08256.1| ribokinase [Staphylococcus epidermidis NIHLM021]
gi|394264512|gb|EJE09193.1| ribokinase [Staphylococcus epidermidis NIHLM020]
gi|394283338|gb|EJE27508.1| ribokinase [Staphylococcus epidermidis NIH05005]
gi|394287933|gb|EJE31880.1| ribokinase [Staphylococcus epidermidis NIH05001]
gi|394288056|gb|EJE32002.1| ribokinase [Staphylococcus epidermidis NIH08001]
gi|394289318|gb|EJE33204.1| ribokinase [Staphylococcus epidermidis NIH04008]
gi|394295078|gb|EJE38733.1| ribokinase [Staphylococcus epidermidis NIH05003]
gi|394296067|gb|EJE39699.1| ribokinase [Staphylococcus epidermidis NIH06004]
gi|394297835|gb|EJE41426.1| ribokinase [Staphylococcus epidermidis NIH04003]
gi|394300942|gb|EJE44418.1| ribokinase [Staphylococcus epidermidis NIH051668]
Length = 307
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 157/308 (50%), Gaps = 18/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQT-LAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSAT 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
+ ++ A V+ Q E+P Q K AR + + + AP +P+ LL
Sbjct: 124 DV-EMSVDAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELPKSLL 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ + ++
Sbjct: 179 ELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCAYQEQ 236
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIP 362
K +IPA V IDTT AGDTF +F + S E +R A A+SL VQ KGA
Sbjct: 237 YK--MIPACNVKAIDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRKGAQA 294
Query: 363 SMPDRKSV 370
S+P RK V
Sbjct: 295 SIPTRKEV 302
>gi|420200632|ref|ZP_14706274.1| ribokinase [Staphylococcus epidermidis NIHLM031]
gi|394267830|gb|EJE12411.1| ribokinase [Staphylococcus epidermidis NIHLM031]
Length = 307
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSENEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVVAQLEVPFEAIEQAFKIARKQNIITVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLNLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K IIPA V +DTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--IIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQVSIPTRKEV 302
>gi|67923213|ref|ZP_00516700.1| Carbohydrate kinase, PfkB [Crocosphaera watsonii WH 8501]
gi|67854944|gb|EAM50216.1| Carbohydrate kinase, PfkB [Crocosphaera watsonii WH 8501]
Length = 309
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 164/307 (53%), Gaps = 9/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+ GS N D+ + LP+ GETV TL GGKGANQA AKL TYFVG+VG
Sbjct: 3 IVIFGSINMDMIAQTPHLPQPGETVIGDHFITLPGGKGANQAVATAKLGRLTYFVGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + L ++++ V D +G A++ +++ G+N+II++ G N +
Sbjct: 63 DSFGRELLKRLET--LKINTQGVFIDQKTFSGVAMINVETSGENTIIVIPGANGNIDESD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ K ++LLQ EIP + A+ A+ GV V+ D +P L ID
Sbjct: 121 ITRLE-KILSKTSLLLLQLEIPLAAVEMAAREAKELGVTVMLDPAPAPEKLPDRLYPLID 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PN++E +L G P D+ E+I +A K GV+ V++KLG KG+ + E Q
Sbjct: 180 IITPNQNEAEKLVGFPLDNEEEIKKAANVLLKKGVKIVVIKLGDKGAFYATDKE----QD 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+PA +V IDT GAGD F A G +E L++ +L +GA ++PD
Sbjct: 236 FVPAIKVKTIDTVGAGDGFNGGIAAALDRGLCLKEALKWGTIVGALTTTKEGAQTALPDL 295
Query: 368 KSVLNLL 374
V +LL
Sbjct: 296 DVVHSLL 302
>gi|416126725|ref|ZP_11596568.1| ribokinase [Staphylococcus epidermidis FRI909]
gi|319400222|gb|EFV88457.1| ribokinase [Staphylococcus epidermidis FRI909]
Length = 307
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V +DTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|145637454|ref|ZP_01793113.1| ribokinase [Haemophilus influenzae PittHH]
gi|145269400|gb|EDK09344.1| ribokinase [Haemophilus influenzae PittHH]
Length = 306
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ Q + GGKG NQA A+L F+G VG
Sbjct: 5 LTVLGSINADHVISVPYFSKPGETLTGDNYQLVYGGKGGNQAVAAARLGANVEFIGCVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +A + G+ ++N V TG A + + +NSI++ G N + E
Sbjct: 65 DVIGETMKNAFAQEGIDTTHINTVSQE--MTGMAFIQVAKSSENSIVLASGAN-AHLGEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLNP----APAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G+Q V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGIAVTDEQSAVKAASVFHDKGIQTVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E K+ +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKAFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|319775572|ref|YP_004138060.1| ribokinase [Haemophilus influenzae F3047]
gi|317450163|emb|CBY86377.1| ribokinase [Haemophilus influenzae F3047]
Length = 306
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A G+ ++N V TG A + + +NSI++ G N + E
Sbjct: 65 DSIGKTMKNAFEQEGIDTTHINTVSQE--MTGMAFIQVAKSSENSIVLASGAN-AHLGEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHDQGIKTVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPM 295
Query: 367 RKSVLNLLQYA 377
R+ L L++A
Sbjct: 296 RQETLEFLEHA 306
>gi|418632225|ref|ZP_13194657.1| ribokinase [Staphylococcus epidermidis VCU128]
gi|374832523|gb|EHR96232.1| ribokinase [Staphylococcus epidermidis VCU128]
Length = 307
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIATSRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VLV LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLVTLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V +DTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|242243700|ref|ZP_04798144.1| ribokinase [Staphylococcus epidermidis W23144]
gi|418633413|ref|ZP_13195829.1| ribokinase [Staphylococcus epidermidis VCU129]
gi|420176075|ref|ZP_14682501.1| ribokinase [Staphylococcus epidermidis NIHLM061]
gi|420190935|ref|ZP_14696873.1| ribokinase [Staphylococcus epidermidis NIHLM037]
gi|420193017|ref|ZP_14698873.1| ribokinase [Staphylococcus epidermidis NIHLM023]
gi|420205335|ref|ZP_14710867.1| ribokinase [Staphylococcus epidermidis NIHLM015]
gi|242232798|gb|EES35110.1| ribokinase [Staphylococcus epidermidis W23144]
gi|374839750|gb|EHS03261.1| ribokinase [Staphylococcus epidermidis VCU129]
gi|394241991|gb|EJD87395.1| ribokinase [Staphylococcus epidermidis NIHLM061]
gi|394258216|gb|EJE03105.1| ribokinase [Staphylococcus epidermidis NIHLM037]
gi|394260459|gb|EJE05271.1| ribokinase [Staphylococcus epidermidis NIHLM023]
gi|394270925|gb|EJE15432.1| ribokinase [Staphylococcus epidermidis NIHLM015]
Length = 307
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLDLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V +DTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|434398465|ref|YP_007132469.1| ribokinase [Stanieria cyanosphaera PCC 7437]
gi|428269562|gb|AFZ35503.1| ribokinase [Stanieria cyanosphaera PCC 7437]
Length = 310
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 13/309 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ VE+ RLP GETV T GGK ANQA AKL PT+ +GQ+G+
Sbjct: 3 VVVFGSINIDLVVEVPRLPSRGETVIGHRFFTAGGGKAANQAVAVAKLGVPTHLIGQIGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ L G+ + VV + +G A ++++ G N I G N
Sbjct: 63 DEFGQILLKNLHNLGISTE--GVVINPHTHSGVASIVVEERGDNIIACAAGAN-----NL 115
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G+ +L ++ +A + LL+ IP S I A+ A+++ VI D +P EL
Sbjct: 116 VGEAELRQFQTLLPQAKVALLELGIPLSTVIAAAQTAKNSNCWVILDPAPAQPNLPNELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ +D+++PNE E +L G D +A H+MG + V++ LG +G+ E
Sbjct: 176 SLVDLITPNEIEASQLVGFTVDGVTTARQAATFLHQMGAKNVVITLGNQGAFCSTGDENY 235
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ + + RV+DT AGD F + A GKS +E +++ A +L V GA PS+P
Sbjct: 236 WVKPV--SVRVVDTVAAGDAFNGALAAALASGKSLKEAVQWGNIAGALAVTKPGAQPSLP 293
Query: 366 DRKSVLNLL 374
R + +L
Sbjct: 294 SRDIFMKML 302
>gi|256847655|ref|ZP_05553100.1| ribokinase [Lactobacillus coleohominis 101-4-CHN]
gi|256715344|gb|EEU30320.1| ribokinase [Lactobacillus coleohominis 101-4-CHN]
Length = 316
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 164/312 (52%), Gaps = 29/312 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS ++ +IDR+PK+GETVAA GGKGANQA ++L + +VG
Sbjct: 5 ITVIGSNMMELSTDIDRMPKLGETVAAPDFHMAFGGKGANQAYAASQLGSNVAMISKVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDG---------QNSIIIVGG 180
D G+ +Y+ K+ G+ V +S+G NSIIIV G
Sbjct: 65 DMLGR-------------EYLKHFKESGIDVAGVSVGKKSNGVAPCFIQGNMNSIIIVQG 111
Query: 181 TNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI 240
N P+ D +++K + +++LQ+EI + + + A GVPV+ + + I
Sbjct: 112 ANSELTPDVLEDY-RDIIKNSKLIVLQQEISLETDYRAIEMAHEYGVPVMLNPAPANDHI 170
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
+ + + SPNE+ELGRLT MP D+ +QI A K +GV+ V+V +G++G AL+V
Sbjct: 171 DIQHVAMCEFYSPNETELGRLTKMPIDTIDQIKAAAHKLVDLGVKNVIVTIGSRG-ALWV 229
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
+ + +IP+ +V +D+ GAGD+F +F+ + +G+ L+ A A A++ V
Sbjct: 230 SKD---HEELIPSYKVDAVDSIGAGDSFVGAFSHYYTQGEDISTALKHANAYAAVTVTRA 286
Query: 359 GAIPSMPDRKSV 370
G+ S P K +
Sbjct: 287 GSQTSYPTAKEL 298
>gi|423344972|ref|ZP_17322661.1| ribokinase [Parabacteroides merdae CL03T12C32]
gi|409222758|gb|EKN15695.1| ribokinase [Parabacteroides merdae CL03T12C32]
Length = 309
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 156/303 (51%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ ++ LP+ GET+ T GGKGANQA A+L F+ + G
Sbjct: 11 ILVVGSSNTDMVIKAAHLPRPGETILGGTFFMNPGGKGANQAVAIARLGGSVTFICKTGS 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y V D G P+G A++ + +N I++ G N + P
Sbjct: 71 DIFGHQSQQLFEEEGINTSY--VFSDSGNPSGVALITVDEKAENCIVVASGANANLLPSD 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ E ++ A ++L+Q E+P VA A G VI + P+P +LL+ +
Sbjct: 129 LAKAE-EAIELADLILMQLEVPMETVCFVADIAWQKGKKVILNPAPAH-PLPADLLHHLY 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ EA +MGVQ V++ LG+KG+ + +G K
Sbjct: 187 LITPNETEAEMITGVKITDEISAVEAARILSRMGVQHVIITLGSKGALICSDG----KAE 242
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+PA +V +DTT AGD F + V EG++ +E +RFA A+++ V GA S P R
Sbjct: 243 IVPALKVEAVDTTAAGDVFNGALTVALSEGRNLKESVRFACKASAISVTRVGAQSSAPYR 302
Query: 368 KSV 370
V
Sbjct: 303 NEV 305
>gi|423196598|ref|ZP_17183181.1| ribokinase [Aeromonas hydrophila SSU]
gi|404632052|gb|EKB28681.1| ribokinase [Aeromonas hydrophila SSU]
Length = 310
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 165/303 (54%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAQVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGRQMKTGFAKDGI--DVSAVELDPKLPTGIAIIYVSDEGENSIGISAEANGALTPSV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ A +LLQ E+P ++ A+ AR+ G V+ + P+ ELL +D
Sbjct: 122 VKGHE-AMIAAAHTLLLQLEVPLESVLEAARLARAHGTRVVLNPAPAR-PLSSELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ ++A + H+MG+++V++ LG++G V K +Q+
Sbjct: 180 LITPNQTEAELLTGVKVTDEASAAKAAARFHQMGIEEVMITLGSQG----VYCSKGQQQA 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G + +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVKAVDTTAAGDTFNGALLAAELAGADFDAAVRFAHGAAALSVTRFGAQSSIPSK 295
Query: 368 KSV 370
+ V
Sbjct: 296 QEV 298
>gi|71733647|ref|YP_274348.1| ribokinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|416016522|ref|ZP_11563849.1| ribokinase [Pseudomonas syringae pv. glycinea str. B076]
gi|416027329|ref|ZP_11570602.1| ribokinase [Pseudomonas syringae pv. glycinea str. race 4]
gi|71554200|gb|AAZ33411.1| ribokinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320324295|gb|EFW80374.1| ribokinase [Pseudomonas syringae pv. glycinea str. B076]
gi|320328583|gb|EFW84585.1| ribokinase [Pseudomonas syringae pv. glycinea str. race 4]
Length = 306
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 158/306 (51%), Gaps = 15/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGGSVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL + + VV+ GV TG A +++ + QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEHIDCQAVTVVE--GVSTGIASIVVDASSQNAIVIVAGGNGRLTPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F ++ +GIV+ Q E+P AR+ G VI + P+P
Sbjct: 123 IERFD----ALLAGSGIVICQLEVPTETVFHTLTRARALGKTVILNPAPASEPLPANWYG 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS EA G + V++ LG +G+ LF
Sbjct: 179 LIDYLIPNESEAQTLTGVTVDSSAAAEEAAAAMLAAGARNVIITLGERGT-LFASAAGVE 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA RV +DTT AGDTF FA G+S + +RF AAA++ V GA PS+
Sbjct: 238 H---IPARRVQAVDTTAAGDTFVGGFAAALAAGQSESQAIRFGQAAAAISVTRAGAQPSI 294
Query: 365 PDRKSV 370
P + V
Sbjct: 295 PTFEEV 300
>gi|156743693|ref|YP_001433822.1| ribokinase [Roseiflexus castenholzii DSM 13941]
gi|156235021|gb|ABU59804.1| ribokinase [Roseiflexus castenholzii DSM 13941]
Length = 304
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 164/311 (52%), Gaps = 21/311 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ V RLP GET+ + T GGKGANQA A+L PT VG+VG+
Sbjct: 3 IVVFGSINMDLVVRTPRLPAPGETLTGHSFFTAPGGKGANQAVACARLDAPTRMVGRVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +L GV+ D V+ G P+G A++ + +N+I+IV G N +
Sbjct: 63 DLFGEQLRHSLRSFGVQDD--GVLTTPG-PSGVALIAVDDAAENTIVIVPGANGAV---- 115
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G ED+ +++ A +LLQ E P + A+A R+ G VI D P+P EL
Sbjct: 116 -GSEDMPRLERALDGARALLLQLETPLATVAAAARAGRARGATVILDPAPA-LPLPDELY 173
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFVEGEK 304
DIL+PNESE LTG+P + + A G + V++KLGA+G+ A G +
Sbjct: 174 ALADILTPNESEATTLTGIPVHDEQSAAAAARALRARGARTVIIKLGARGALAADANGVR 233
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
PA V +DT AGD F AV EG+ EE +R+ AA +L V GA P
Sbjct: 234 -----FWPAFTVTAVDTVAAGDAFNGGLAVALSEGRPFEEAIRWGLAAGALSVTKHGAQP 288
Query: 363 SMPDRKSVLNL 373
SMPDR +L L
Sbjct: 289 SMPDRAELLAL 299
>gi|119483252|ref|ZP_01618666.1| ribokinase [Lyngbya sp. PCC 8106]
gi|119458019|gb|EAW39141.1| ribokinase [Lyngbya sp. PCC 8106]
Length = 305
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 158/306 (51%), Gaps = 5/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L++ GS N D+ V+ RLP GET+ T GGKGANQA A+L TY VG+VGE
Sbjct: 3 LIIFGSINMDLVVQTPRLPSPGETLQGDHFFTAPGGKGANQAVAAARLGALTYLVGRVGE 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + L+ GV+ +++ V D +G A++ + + +N+I+I+ G N
Sbjct: 63 DSFGQELLAHLNETGVQTEWVKV--DSQTSSGVAMIAVDQNSENTIMIIPGANGRVEASD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + + +LLQ E+P I+ AKAA+ AGV VI D +P EL ID
Sbjct: 121 V-DRLKNLFSHSSALLLQLEVPLPAIIEAAKAAKQAGVKVILDPAPAPESLPDELYPLID 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E +LTG ++ GV+ V++KLGA+G +G +
Sbjct: 180 IITPNETEAKQLTGFDLSEENNWIKSTEFFINRGVKTVVLKLGARGVFCLNKGGH-FRVE 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + IDT AGD F + A F G S E + + AA +L GA PS+PDR++
Sbjct: 239 AFP-VQAIDTVAAGDAFNGAMAAAFEAGLSLREAVIWGTAAGALATTKPGAQPSLPDRET 297
Query: 370 VLNLLQ 375
L
Sbjct: 298 FEAFLH 303
>gi|425062834|ref|ZP_18465959.1| Ribokinase [Pasteurella multocida subsp. gallicida X73]
gi|404383540|gb|EJZ79991.1| Ribokinase [Pasteurella multocida subsp. gallicida X73]
Length = 306
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 160/311 (51%), Gaps = 15/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAKPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGANAYLTETV 121
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F D+ + +A +L+Q E P S I AK A+SA V+ + P+P ELL
Sbjct: 122 VEQFADK----ITQADTLLMQLETPLSAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLT 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ ++A H+ G++ VL+ LG+KG +K
Sbjct: 177 QLDMITPNETETEILTGVKVVDEHSAAQAAALFHQKGIETVLITLGSKG---VYASQKGT 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++ RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+
Sbjct: 234 PGKMVAGFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSI 293
Query: 365 PDRKSVLNLLQ 375
P R+ LN LQ
Sbjct: 294 PTRQETLNFLQ 304
>gi|365841716|ref|ZP_09382774.1| ribokinase [Flavonifractor plautii ATCC 29863]
gi|364577102|gb|EHM54389.1| ribokinase [Flavonifractor plautii ATCC 29863]
Length = 310
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 9/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGSAN D + + + P++GET+ ++ + GGKGANQA +L T F+ VG+
Sbjct: 7 ILVVGSANVDFVIGVRQAPELGETILCRSFRKTCGGKGANQAYACGRLGGNTAFLNAVGD 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L V + V GV TG AVV + G NSII++ G N C +
Sbjct: 67 DPLGGELVRNLQQANVDTRAIRTVD--GVSTGMAVVCVDEKGNNSIIVIPGANNLCDVD- 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +++ IVLLQ EIP + A VI + +P E+ +D
Sbjct: 124 YLRRNRARFEESDIVLLQMEIPFESVCYAVELASGLHKTVILNPAPAPDSLPDEVYAGLD 183
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV--EGEKPIK 307
L+PNESE RLTG PTD E+++ + G + +++ LG++G AL V EG +
Sbjct: 184 YLTPNESEFKRLTGCPTDEVEELAVHCKPLLEKGTRNIIITLGSRG-ALHVNREGHTLYR 242
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
P + +DTT AGDTF A+ A +G+S E + FA A++L V GA S+P
Sbjct: 243 P---PEVQAVDTTAAGDTFNAALARELADGRSTGEAIVFANMASALAVSRVGAQDSIPSY 299
Query: 368 KSVLNL 373
+ VL+
Sbjct: 300 EEVLDF 305
>gi|251811792|ref|ZP_04826265.1| ribokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875081|ref|ZP_06283954.1| ribokinase [Staphylococcus epidermidis SK135]
gi|417914418|ref|ZP_12558062.1| ribokinase [Staphylococcus epidermidis VCU109]
gi|421608214|ref|ZP_16049440.1| ribokinase [Staphylococcus epidermidis AU12-03]
gi|251804720|gb|EES57377.1| ribokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295846|gb|EFA88367.1| ribokinase [Staphylococcus epidermidis SK135]
gi|341651974|gb|EGS75764.1| ribokinase [Staphylococcus epidermidis VCU109]
gi|406656107|gb|EKC82520.1| ribokinase [Staphylococcus epidermidis AU12-03]
Length = 307
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 159/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSENEETGQAFITVDEAGQNIILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLNLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K IIPA V +DTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--IIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|433660157|ref|YP_007301016.1| Ribokinase [Vibrio parahaemolyticus BB22OP]
gi|432511544|gb|AGB12361.1| Ribokinase [Vibrio parahaemolyticus BB22OP]
Length = 305
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 160/306 (52%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLTSEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP +P ELL
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARVAKDAKTNVILNP----APARELPDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ E EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDNESAQEAANVLHGKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF +F G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGAFVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV 370
P R+ V
Sbjct: 293 PTREEV 298
>gi|239828467|ref|YP_002951091.1| ribokinase [Geobacillus sp. WCH70]
gi|239808760|gb|ACS25825.1| ribokinase [Geobacillus sp. WCH70]
Length = 295
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 163/312 (52%), Gaps = 24/312 (7%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVGS N D+ R P GET+ + + GGKGANQA A+L + +G
Sbjct: 2 TKPVITVVGSINMDLVTIASRFPSQGETILGEEFHLIPGGKGANQAVAAARLGADVHMIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VGEDA G + +L GV +D + V D G TG A + + S+ N II+V G N +
Sbjct: 62 AVGEDAFGTELLRSLEREGVHIDNVKPVTDKG--TGIASITI-SEQDNRIIVVPGANHAL 118
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
PE D E++ K+ + +LQ EIP SV + A A+ GV VI + P+PQ+L+
Sbjct: 119 RPEDI-DRCEEMIAKSDVCVLQLEIPLSVVERAAFLAKKHGVRVILNPAPAQ-PLPQKLI 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+D L+PNE E + +EQ+ +V+V GA+G + +G
Sbjct: 177 EQVDFLTPNEHERDII-------FEQVDADAF------ADKVIVTEGARGVTIRKDG--- 220
Query: 306 IKQSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
KQ +IP R V+DTTGAGDTF + AV +G S EE FA AAA+L V GA
Sbjct: 221 -KQMLIPGFRVPVVDTTGAGDTFNGALAVALSKGMSLEEACLFANAAAALSVTKLGAQGG 279
Query: 364 MPDRKSVLNLLQ 375
MP ++ V L+
Sbjct: 280 MPMKEEVERFLK 291
>gi|332799740|ref|YP_004461239.1| ribokinase [Tepidanaerobacter acetatoxydans Re1]
gi|438002991|ref|YP_007272734.1| Ribokinase [Tepidanaerobacter acetatoxydans Re1]
gi|332697475|gb|AEE91932.1| ribokinase [Tepidanaerobacter acetatoxydans Re1]
gi|432179785|emb|CCP26758.1| Ribokinase [Tepidanaerobacter acetatoxydans Re1]
Length = 313
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 147/297 (49%), Gaps = 7/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS D+ + R P+ GET+ + GGKGANQA AKL +G+VGE
Sbjct: 4 ILVIGSFMMDLVAKTPRAPREGETIIGHSFSQFTGGKGANQAVAAAKLGSNVTMLGKVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G ++L GV +Y V+KD TG V L+ +G+N III+ G NM P
Sbjct: 64 DSFGDSQINSLKSAGVNTEY--VIKDNSDSTGVGFVTLEDNGKNRIIIIPGVNMLLKPSD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++K + I++LQ EIP A +IF+ A I E L +
Sbjct: 122 IIRNE-KLIKLSDIIILQLEIPLETVYTAIDIAYKYSKTIIFNPAPA-AKINNEYLKKVS 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEGEKPIKQ 308
PNE E TG+ + E A K KMG Q ++ +G KG ++ E+ +
Sbjct: 180 YFIPNEIEAKDFTGIDIVNKESAKIAAAKLLKMGCQNTVITMGDKGVYFLNIKDEEYFVE 239
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
I VIDTT AGD F +FA G + +CLR A A+A+L V GA PS+P
Sbjct: 240 GI--NVNVIDTTAAGDAFVGAFAFGLGQDLDHYDCLRLANASAALSVTRMGAQPSLP 294
>gi|167038425|ref|YP_001666003.1| ribokinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167038832|ref|YP_001661817.1| ribokinase [Thermoanaerobacter sp. X514]
gi|300913583|ref|ZP_07130900.1| ribokinase [Thermoanaerobacter sp. X561]
gi|307723402|ref|YP_003903153.1| ribokinase [Thermoanaerobacter sp. X513]
gi|320116823|ref|YP_004186982.1| ribokinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166853072|gb|ABY91481.1| ribokinase [Thermoanaerobacter sp. X514]
gi|166857259|gb|ABY95667.1| ribokinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300890268|gb|EFK85413.1| ribokinase [Thermoanaerobacter sp. X561]
gi|307580463|gb|ADN53862.1| ribokinase [Thermoanaerobacter sp. X513]
gi|319929914|gb|ADV80599.1| ribokinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 309
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 159/314 (50%), Gaps = 22/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ + + +P VGETV A + GGKGANQA A+L + +G+VG
Sbjct: 4 IVVVGSINMDVVIRVPHIPVVGETVIAYDLKNYGGGKGANQAVSIARLGGTVFMIGRVGN 63
Query: 130 DANGK-----LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
D GK L D++ G+ DY +PTG A + + G+N+I++ G N
Sbjct: 64 DEYGKKLYEDLKNDSVDIKGIEFDYE-------IPTGTAYINVSERGENNIVVYQGANKR 116
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
E+ + ++ +A + ++Q EIP V G+ VI + AP +P
Sbjct: 117 LNIEQIEKHE-DIFDEAKMCVIQLEIPVETVEFVVDLCYRKGIKVILNP----APACELP 171
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
LL + IL+PNE+EL L+ T++ I +A GVQ V+ +G KGS +
Sbjct: 172 DTLLEKVYILTPNETELALLSRSKTETIADIKKASKYLLDKGVQNVITTIGEKGSFFINK 231
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ + +I A +DTT AGD+FT + AV EGK+ E + FA A+L V +GA
Sbjct: 232 DTEKLFDAIKVTA--VDTTAAGDSFTGALAVALSEGKNIESAIEFATYVAALTVTKEGAQ 289
Query: 362 PSMPDRKSVLNLLQ 375
S+P R V ++
Sbjct: 290 SSLPYRDEVEKFIK 303
>gi|407718475|ref|YP_006795880.1| ribokinase family sugar kinase [Leuconostoc carnosum JB16]
gi|407242231|gb|AFT81881.1| ribokinase family sugar kinase [Leuconostoc carnosum JB16]
Length = 303
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 166/311 (53%), Gaps = 25/311 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA A+ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLVGETMALTDVSTAPGGKGANQAVAAARQGADVSFIGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + L G+ +D +V+ +G VPTG A +MLQ +G N+I+I GG+N +
Sbjct: 65 DTNGQFMRTTLLANGINVD--SVMTNGDVPTGSAYIMLQDNGANTILIHGGSNQAL---T 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + E++ A ++ Q E+P V K A++ V I + + EL D
Sbjct: 120 ISDLNEELIASADTLIAQFEVPLDVITVAFKIAKNNNVQTILNPAPAVYELTPELTAVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYE----QISEAVVKCHKMGVQQVLVKLGAKGSALFVEG--- 302
I+ PNE+E LTG+ ++ E Q+S+A++ + GV + ++ LG GS +G
Sbjct: 180 IILPNETEAQLLTGLTVENTEEILNQVSDALL---EKGVPRSIITLGDAGS-FIADGSHR 235
Query: 303 --EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKG 359
+KPIK + DTT AGDTF + A S +E + A+ A+++ V +G
Sbjct: 236 WWQKPIKVT------AEDTTAAGDTFIGTLASVLAPDFSNLDEAVHRASTASAIAVTRQG 289
Query: 360 AIPSMPDRKSV 370
AIPS+P R V
Sbjct: 290 AIPSIPTRIEV 300
>gi|417852403|ref|ZP_12497993.1| ribokinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|338216947|gb|EGP02886.1| ribokinase [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
Length = 306
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 159/308 (51%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAKPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N + E
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGAN-AYLTET 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ + +A +L+Q E P S I AK A+SA V+ + P+P ELL +D
Sbjct: 121 VVEQFANKITQADTLLMQLETPLSAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLTQLD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ ++A H+ G++ VL+ LG+KG +K
Sbjct: 180 IITPNETETEILTGVKVVDEHSAAQAAALFHQKGIETVLITLGSKG---VYASQKGAPGK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+ RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+P R
Sbjct: 237 IVAGFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSIPTR 296
Query: 368 KSVLNLLQ 375
+ LN LQ
Sbjct: 297 QETLNFLQ 304
>gi|154483814|ref|ZP_02026262.1| hypothetical protein EUBVEN_01518 [Eubacterium ventriosum ATCC
27560]
gi|149735305|gb|EDM51191.1| putative ribokinase [Eubacterium ventriosum ATCC 27560]
Length = 299
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 156/306 (50%), Gaps = 17/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N+D+ ++I RLP GET+ A + AGGKGANQA AKL PTY VG VG
Sbjct: 5 ITVIGSLNYDVILKIPRLPFKGETLTANGAAFSAGGKGANQAVQAAKLKTPTYMVGCVGT 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+ + + GV +DY+ V +G V+ DG IV G N E
Sbjct: 65 DASADFLVNTAKEYGVNVDYIRKVPGS---SGMGVINAVEDGSVYACIVRGANFEVTKED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D + ++K++G+ +LQ EIP + + A+ AG V+ +A AP +P+E L+
Sbjct: 122 V-DNAMPILKESGVCILQNEIPVEIIVYAIDKAKEAGCTVVLNA----APAIELPEECLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DIL NE E DS E+ + K + V+ LG G+ + G
Sbjct: 177 KVDILVVNEVEAEFYCHEKIDSVEKAKTEIKKMAEKYNNNVIFTLGKDGAVAYENG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA +V I+TTGAGD++ + + +EGKS E +FA +++ V GA PSM
Sbjct: 233 TIEFIPAMKVDAIETTGAGDSYIGAVSHSIIEGKSLIEACKFATKCSAITVCRMGAQPSM 292
Query: 365 PDRKSV 370
P + V
Sbjct: 293 PTLEDV 298
>gi|15643720|ref|NP_228768.1| ribokinase [Thermotoga maritima MSB8]
gi|4981498|gb|AAD36039.1|AE001759_3 ribokinase [Thermotoga maritima MSB8]
Length = 299
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 15/305 (4%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGED 130
VVGS+N DI +++D K GET A GGKGANQA AK+ FV +G D
Sbjct: 7 VVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGND 66
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
L+ + G+ Y+ V +PTG A + + GQN III G N E
Sbjct: 67 DYSDLLIENYEKLGIT-GYIRV----SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELI 121
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
D + ++ I+LLQ EIP ++ AK R G+ VIFD I +E+ ++D
Sbjct: 122 ---DWNTLSESDILLLQNEIPFETTLECAK--RFNGI-VIFDPAPAQG-INEEIFQYLDY 174
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
L+PNE E+ L+ + + +A K ++GV+ V+VKLG KG L + EK K
Sbjct: 175 LTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEK--KHFP 232
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+ +DTT AGD F +FAV EGK+ EE + F AAA++ V GA S+P R+ V
Sbjct: 233 TFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEV 292
Query: 371 LNLLQ 375
L+
Sbjct: 293 EAFLK 297
>gi|229844335|ref|ZP_04464475.1| ribokinase [Haemophilus influenzae 6P18H1]
gi|229812584|gb|EEP48273.1| ribokinase [Haemophilus influenzae 6P18H1]
Length = 306
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + +A + R+D ++ TG A + + G+NSI++ G N
Sbjct: 65 DSIGETMKNAFAK--ERIDTTHISTVSQEMTGMAFIQVAQSGENSIVLASGANAHLGEIV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++ + + +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 123 VRQSEAQIAQ-SDCLLMQLETPLSGVELAAQIAKKNGVQVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVAVTDEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFITALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L+ L+YA
Sbjct: 296 RQETLDFLEYA 306
>gi|390960099|ref|YP_006423856.1| ribokinase [Terriglobus roseus DSM 18391]
gi|390415017|gb|AFL90521.1| ribokinase [Terriglobus roseus DSM 18391]
Length = 300
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 169/313 (53%), Gaps = 24/313 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ +DR+P GETVA + + GGKGANQA A+L VG VG
Sbjct: 4 IVVVGSLNMDMVSTVDRMPAPGETVAGRGFAMVHGGKGANQAVAAARLGAVVRMVGCVGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G L+ L G+ D V + G +G A + + G NSI++ G N P
Sbjct: 64 DSFGGLLRQGLVAEGI--DVAGVRECPGA-SGVAAITVDGSGGNSIVVYAGANALLLP-- 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
G D + A +VL+Q E P + +++A+ +AG P++ D P P + L
Sbjct: 119 -GMIDAASIDSAAMVLVQLETPMATVVRLAEVCSAAGTPLMLD------PAPAQALSVSL 171
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L L+PNESE L G+ D + EA + +GV+ V++KLGA+G +++ G
Sbjct: 172 LRKTAWLTPNESEARTLLGVAED--LPMEEAAERLLALGVRNVMLKLGARG--VYLAGAD 227
Query: 305 PIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+ +++PA R +DTT AGD F A+FAV EG++ RFA AAA+L GA P
Sbjct: 228 -VASTLVPAPAVRAVDTTAAGDCFNAAFAVALTEGQAPVAAARFACAAAALSTTGAGAQP 286
Query: 363 SMPDRKSVLNLLQ 375
SMP R++VL +++
Sbjct: 287 SMPTREAVLRMMR 299
>gi|383757623|ref|YP_005436608.1| ribokinase RbsK [Rubrivivax gelatinosus IL144]
gi|381378292|dbj|BAL95109.1| ribokinase RbsK [Rubrivivax gelatinosus IL144]
Length = 336
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 154/304 (50%), Gaps = 9/304 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ + + P+ G+TV A Q + GGKGANQA A++ P +G VG
Sbjct: 17 VAVVGSLNLDLVLRVQHAPEAGQTVQADGLQQVNGGKGANQAVACARMGAPVRMIGCVGA 76
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + D L G+ + ++ +D TG AVV++++ GQN I++ G N + E
Sbjct: 77 DAPGERLADGLRAEGIDVRWLR--RDAQASTGTAVVVVEASGQNRIVVHPGANATLAFEN 134
Query: 190 FGDEDLE-VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D E + V++Q E P + QVA+ A+ G+ V+ + P+ + +
Sbjct: 135 --DSACEQALDGCAAVVMQLETPLATARQVAETAQRRGLRVVLNP-SPSLPLDESWWPLV 191
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEGEKPIK 307
+L NESE G TG + A + G +VLV LG G + GE+
Sbjct: 192 SLLIVNESEAGAYTGTAVADAAAAARAARTLRERGCAEVLVTLGEHGVVVSDARGER--L 249
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+P A+V+DTTGAGDTF + + G+ + R AASLCVQ GA PS+P R
Sbjct: 250 HPAVPVAQVVDTTGAGDTFLGAVVAELMAGRDLDTAARTGLRAASLCVQTAGAQPSIPHR 309
Query: 368 KSVL 371
S L
Sbjct: 310 DSAL 313
>gi|418044872|ref|ZP_12682968.1| ribokinase [Thermotoga maritima MSB8]
gi|351677954|gb|EHA61101.1| ribokinase [Thermotoga maritima MSB8]
Length = 296
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 15/305 (4%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGED 130
VVGS+N DI +++D K GET A GGKGANQA AK+ FV +G D
Sbjct: 4 VVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGND 63
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
L+ + G+ Y+ V +PTG A + + GQN III G N E
Sbjct: 64 DYSDLLIENYEKLGIT-GYIRV----SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELI 118
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
D + ++ I+LLQ EIP ++ AK R G+ VIFD I +E+ ++D
Sbjct: 119 ---DWNTLSESDILLLQNEIPFETTLECAK--RFNGI-VIFDPAPAQG-INEEIFQYLDY 171
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
L+PNE E+ L+ + + +A K ++GV+ V+VKLG KG L + EK K
Sbjct: 172 LTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEK--KHFP 229
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+ +DTT AGD F +FAV EGK+ EE + F AAA++ V GA S+P R+ V
Sbjct: 230 TFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEV 289
Query: 371 LNLLQ 375
L+
Sbjct: 290 EAFLK 294
>gi|292486514|ref|YP_003529380.1| ribokinase [Erwinia amylovora CFBP1430]
gi|428783433|ref|ZP_19000930.1| ribokinase [Erwinia amylovora ACW56400]
gi|291551927|emb|CBA18964.1| ribokinase [Erwinia amylovora CFBP1430]
gi|312170581|emb|CBX78845.1| ribokinase [Erwinia amylovora ATCC BAA-2158]
gi|426278083|gb|EKV55804.1| ribokinase [Erwinia amylovora ACW56400]
Length = 325
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 171/333 (51%), Gaps = 18/333 (5%)
Query: 48 KCQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKG 107
+ C RR + + + + L V+GS N D + + P+ GETV K Q GGKG
Sbjct: 3 RATCGRR--SYLDNSLMKKTGKLTVLGSINADHILNLAHFPRPGETVIGKQYQVAFGGKG 60
Query: 108 ANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML 167
ANQA A+ F+ VGED G+ I L+ R+D +V G TG A++ +
Sbjct: 61 ANQAVAAARSGADMAFIACVGEDDIGERIRLQLAND--RIDIASVAVISGGSTGVALIFV 118
Query: 168 QSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGV 227
DG+N+I I G N + P++ + L + +A I+L+Q E P + A+ A
Sbjct: 119 DGDGENTIGIYAGANAALTPQRVVEHQL-TIAEAQILLMQLESPLDSVLAAARIAHQHQT 177
Query: 228 PVIFDAGGMDAPIPQ---ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGV 284
V+ + AP Q ELL +DI++PNE+E LTG+ +S E + A K H+ G+
Sbjct: 178 RVVLNP----APAMQLSDELLALVDIITPNETEAQILTGVAVNSDEDAARAAQKLHEKGI 233
Query: 285 QQVLVKLGAKGSALFVEGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREE 342
VL+ LG++G L +G K +PA V +DT AGDTF + +E + E
Sbjct: 234 TTVLITLGSRGVWLSEQG----KGHCVPAFSVAAVDTVAAGDTFNGALMTALLEQRPMTE 289
Query: 343 CLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
+RFA AAA++ V +GA PS+P R + + LQ
Sbjct: 290 SVRFAHAAAAIAVTRRGAQPSVPWRDEIDSFLQ 322
>gi|319795872|ref|YP_004157512.1| ribokinase [Variovorax paradoxus EPS]
gi|315598335|gb|ADU39401.1| ribokinase [Variovorax paradoxus EPS]
Length = 320
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 165/316 (52%), Gaps = 7/316 (2%)
Query: 57 NPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAK 116
+P P + PP +VV+GS N D+ + + P GET+ + + GGKGANQA A+
Sbjct: 2 SPKPSSRSPEPPQIVVLGSLNMDLVLRVPHAPAAGETLIGHSIANIPGGKGANQAVSCAR 61
Query: 117 LSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSII 176
+G VG+DA+G+ + ++L G+ + V+ G PTG A+++++ GQN I+
Sbjct: 62 EGAQVRMIGCVGDDAHGRALRESLERDGIDTAALRTVE--GEPTGTALILVEDSGQNRIV 119
Query: 177 IVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM 236
I+ G N ++ L ++ A ++ Q E P + A AG V+ + +
Sbjct: 120 IIPGANARVEIDEAA--MLGQLQGAAFLVTQFETPMDQIARAISVAHEAGCKVLLNPSPV 177
Query: 237 DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS 296
A I + L + ID L NE E L G DS + + A G+ +V+V LG++G
Sbjct: 178 QA-IAEPLWSRIDTLVVNEIEAETLCGQSADSPQDAARAGRALRAKGIARVVVTLGSRG- 235
Query: 297 ALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQ 356
A+ V+ + + P + +DTT AGDTF + AV EG+S +E +R AA+LC+Q
Sbjct: 236 AVAVDADG-ARHHPAPKVQAVDTTAAGDTFLGALAVALGEGQSFDEAVRLGIRAAALCIQ 294
Query: 357 VKGAIPSMPDRKSVLN 372
GA PS+P R +VL
Sbjct: 295 QPGAQPSIPQRDAVLQ 310
>gi|334137330|ref|ZP_08510768.1| ribokinase [Paenibacillus sp. HGF7]
gi|333605103|gb|EGL16479.1| ribokinase [Paenibacillus sp. HGF7]
Length = 322
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 165/319 (51%), Gaps = 21/319 (6%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+N P + V GS N D+ V +RLP GETV + + + GGKGANQA A+L
Sbjct: 1 MNRPAKIAVAGSINMDLVVTAERLPVPGETVMGRQFRMIPGGKGANQAVAAARLGAQVSM 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+G VG D G + + L G G+ ++ ++ +G A++ +Q G NSI++V G N
Sbjct: 61 IGCVGGDTFGAQMLEGLRGEGIDTAFVATAEE--TSSGVALIQVQGGGDNSIVVVPGANA 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
+ PE+ + E ++ A ++L+Q EIP +SV V A R GV VI D A +P
Sbjct: 119 ALTPERVSQAE-EAIRGADVLLVQLEIPLESVRRAVEIAHRH-GVKVILDPAPA-AELPL 175
Query: 243 ELLNFIDILSPNESELGRLTG--------MPTDSYEQISEAVVKC-HKMGVQQVLVKLGA 293
LL ID+++PNE+E LTG +SE++ + + G V+V G
Sbjct: 176 SLLRQIDLITPNETEALILTGGAADASPDASAQDGRTVSESIRQLKERTGGAGVVVTCGG 235
Query: 294 KGSALFVEGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAA 351
KG ++G KQ PA RV DTT AGD+F A AV + EG EE +RFA+
Sbjct: 236 KGVLYDLDG----KQGADPAYRVDAADTTAAGDSFNAGLAVRWSEGAPLEEAVRFASKVG 291
Query: 352 SLCVQVKGAIPSMPDRKSV 370
+L V GA S+P R V
Sbjct: 292 ALTVTRFGAQTSLPARDEV 310
>gi|251780035|ref|ZP_04822955.1| ribokinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243084350|gb|EES50240.1| ribokinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 309
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 172/317 (54%), Gaps = 28/317 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ ++I +PK GET+ +K+ + + GGKGANQA + + ++G+
Sbjct: 4 ICVLGSMNMDLVMKIKDMPKSGETILSKSYEKIPGGKGANQAVAAKRSGAYVSMIAKIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + D L + +DY V +D TG A++M+ G NSII+ G+NMS EK
Sbjct: 64 DDYGRTLRDELKNDDINIDY--VFEDDSNATGTAMIMVADTGNNSIIVNPGSNMSI-NEK 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D L+ +K++ I++ Q E P+ ++++ K A+ I + AP I ELL+
Sbjct: 121 EIDSTLDRIKESDILIAQFETPEEMSLRAFKNAKENEKITILNP----APAKKIKDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEG 302
DI+ PNE+E LTG+ ++ E +A GV+ V++ +G+KG+A+ F E
Sbjct: 177 VTDIIVPNETEAEVLTGVTVENVEDAKKAAKVFMDKGVKFVIITMGSKGAAVIGKDFCE- 235
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECL----RFAAAAASLCVQ 356
++PA +V IDTT AGD+F + + +E L +F +S+ VQ
Sbjct: 236 -------LVPAYKVNAIDTTAAGDSFIGGLSTKLNPNEITKENLLMSVKFGNMVSSIAVQ 288
Query: 357 VKGAIPSMPDRKSVLNL 373
+GA PS+P +K V+ +
Sbjct: 289 REGAQPSIPYKKEVVKV 305
>gi|374606906|ref|ZP_09679722.1| ribokinase [Paenibacillus dendritiformis C454]
gi|374387481|gb|EHQ58987.1| ribokinase [Paenibacillus dendritiformis C454]
Length = 310
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 162/306 (52%), Gaps = 21/306 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D + RLP VGETV ++ + AGGKG NQA A+L F+G+VGE
Sbjct: 4 ICVVGSLNRDTSHLLARLPMVGETVHGISTSSSAGGKGCNQAVSAARLGAKVAFIGKVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L + +++V D V +G A +++Q DG+N+II+ G NMS E
Sbjct: 64 DKAGDQLLAVLKEEQIDTSHIDV--DPKVHSGEATILIQEDGKNAIIVTPGANMSIREED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + KA IV+ Q EIP Q A+ G + + AP IP+ELL
Sbjct: 122 I-ERAYSAIDKADIVIAQFEIPIPAVTQAFVYAKQQGKVTVLNP----APAKVIPEELLR 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
DIL PNESE+ +TG+ S + I +A + G++ V+V LG +G AL +
Sbjct: 177 ATDILVPNESEMQIITGVEPSSDDAIRQAADRLLGYGIRYVIVTLGEQG-ALICHADGAA 235
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFA-----VGFVEGKSREECLRFAAAAASLCVQVKG 359
+PA RV +DTT AGD+F + + + + ++ +RFA + ++L VQ KG
Sbjct: 236 H---VPAKRVTAVDTTAAGDSFIGALCSRLDLAQWQDVRHMQDIVRFANSFSALVVQRKG 292
Query: 360 AIPSMP 365
AI S+P
Sbjct: 293 AISSIP 298
>gi|387120494|ref|YP_006286377.1| ribokinase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415764592|ref|ZP_11482516.1| ribokinase [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416033406|ref|ZP_11573052.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|416044152|ref|ZP_11574928.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|429732586|ref|ZP_19267189.1| ribokinase [Aggregatibacter actinomycetemcomitans Y4]
gi|347996456|gb|EGY37531.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347999118|gb|EGY39994.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|348654123|gb|EGY69765.1| ribokinase [Aggregatibacter actinomycetemcomitans D17P-3]
gi|385874986|gb|AFI86545.1| ribokinase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429155709|gb|EKX98366.1| ribokinase [Aggregatibacter actinomycetemcomitans Y4]
Length = 310
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L P F+
Sbjct: 5 LVVLGSVNADHVIRVPRFARAGETLRGSGYRIAYGGKGANQAVAAARLKDPNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G+ + A + G+ + ++ TG A++ + +G+NSI+I G N +C
Sbjct: 65 LGNDDIGRAMKAAFAKDGINTATITQIEQE--MTGVAMIQVADNGENSIVISAGAN-ACL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S + A+ A+ G VI + A +P+ELL
Sbjct: 122 DEHLVSCYAVHIQQADALLMQLETPLSAICKAAQIAKQNGTKVILNPAPAQA-LPEELLR 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + ++A + H++GVQ VL+ LGAKG G+ I
Sbjct: 181 QLYMITPNETEAEILTGIKVEDKISAAQAAKRFHQLGVQIVLITLGAKGVYFSENGQGQI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
AR DTT AGDTF + V +EGK+ +RFA AAA++ V +GA PS+P
Sbjct: 241 IGGFRVKAR--DTTAAGDTFNGALVVALLEGKTLTNAIRFAHAAAAISVTREGAQPSIPH 298
Query: 367 RKSVLNLL 374
R L+ L
Sbjct: 299 RAETLDFL 306
>gi|365155908|ref|ZP_09352252.1| ribokinase [Bacillus smithii 7_3_47FAA]
gi|363627885|gb|EHL78724.1| ribokinase [Bacillus smithii 7_3_47FAA]
Length = 294
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 118/312 (37%), Positives = 165/312 (52%), Gaps = 38/312 (12%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS++ D+ V R P+ GET+ + +T+ GGKGANQA A+L +G VG+
Sbjct: 4 IVVVGSSSMDLVVTSPRRPEAGETIIGTSFKTVPGGKGANQAVAAARLGAEVTLIGCVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G LI D L GV D++ V GV +G A + L +DG NSII+V G N P+
Sbjct: 64 DHYGSLIVDNLQKNGVSTDFVKPVT--GVESGTAHITL-ADGNNSIIVVKGANDFITPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++ LE +KKA +VL+Q+EIP+ V S V ++ + AP I E+++
Sbjct: 120 YVEKALESIKKADVVLIQQEIPEETVEYVTDVCASNEVKLVLNP----APARKINPEVIS 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
L+PNE E L D E+ ++L L K + EGE +
Sbjct: 176 KATFLTPNEHEYQVL----FDGKER-------------SEMLAALPNK--LIITEGEHGV 216
Query: 307 K------QSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
+ + +IP+ + V+DTTGAGDTF A+FAV E KS E LRFA AASL V
Sbjct: 217 RYHNGTEEVVIPSYKVDVVDTTGAGDTFNAAFAVALAERKSITESLRFANCAASLSVTKF 276
Query: 359 GAIPSMPDRKSV 370
GA MP R+ V
Sbjct: 277 GAQGGMPTREEV 288
>gi|289623643|ref|ZP_06456597.1| ribokinase [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289647139|ref|ZP_06478482.1| ribokinase [Pseudomonas syringae pv. aesculi str. 2250]
gi|422582849|ref|ZP_16657981.1| ribokinase [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330867688|gb|EGH02397.1| ribokinase [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 306
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 158/306 (51%), Gaps = 15/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVATARLGGSVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL + + VV+ GV TG A +++ + QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEHIDCQAVTVVE--GVSTGIASIVVDASSQNAIVIVAGGNGRLTPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F ++ +GIV+ Q E+P AR+ G VI + P+P
Sbjct: 123 IERFD----ALLAGSGIVICQLEVPTETVFHTLTRARALGKTVILNPAPASEPLPANWYG 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS EA G + V++ LG +G+ LF
Sbjct: 179 LIDYLIPNESEAQTLTGVTVDSSAAAEEAAAAMLAAGARNVIITLGERGT-LFASAAGVE 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA RV +DTT AGDTF FA G+S + +RF AAA++ V GA PS+
Sbjct: 238 H---IPARRVQAVDTTAAGDTFVGGFAAALAAGQSESQAIRFGQAAAAISVTRAGAQPSI 294
Query: 365 PDRKSV 370
P + V
Sbjct: 295 PTFEEV 300
>gi|383310753|ref|YP_005363563.1| ribokinase [Pasteurella multocida subsp. multocida str. HN06]
gi|386834744|ref|YP_006240061.1| ribokinase [Pasteurella multocida subsp. multocida str. 3480]
gi|380872025|gb|AFF24392.1| ribokinase [Pasteurella multocida subsp. multocida str. HN06]
gi|385201447|gb|AFI46302.1| ribokinase [Pasteurella multocida subsp. multocida str. 3480]
Length = 306
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 160/311 (51%), Gaps = 15/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAKPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGANAYLTETV 121
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F D+ + +A +L+Q E P S I AK A+SA V+ + P+P ELL
Sbjct: 122 VEQFADK----ITQADTLLMQLETPLSAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLT 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ ++A H+ G++ VL+ LG+KG +K
Sbjct: 177 QLDMITPNETETEILTGVKVVDEHSAAQAAALFHQKGIETVLITLGSKG---VYASQKGT 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++ RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+
Sbjct: 234 LGKMVAGFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSI 293
Query: 365 PDRKSVLNLLQ 375
P R+ LN LQ
Sbjct: 294 PTRQETLNFLQ 304
>gi|373464881|ref|ZP_09556384.1| ribokinase [Lactobacillus kisonensis F0435]
gi|371761652|gb|EHO50254.1| ribokinase [Lactobacillus kisonensis F0435]
Length = 305
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 155/303 (51%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS D+ I+R+P GET+ A Q GGKGANQA ++L F+ VG
Sbjct: 6 VLVIGSNMIDLITYINRMPIEGETIEAPDFQMGFGGKGANQAVAASRLGSKVSFISMVGN 65
Query: 130 DANGK-----LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
D GK + + GV + G +G A + ++ N I+I+ G N
Sbjct: 66 DTFGKQQLANFKENHIDTTGVSI--------GTKSSGAAPIFVEPTSDNRILIIKGANNE 117
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
PE D ++++K I++LQ+EIP N A +PV+ + + +
Sbjct: 118 LTPEVL-DRYIDLIKNTKIIVLQQEIPLETNYHAIDLANQFNIPVLLNPAPANEDLDINH 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
++ +D SPNE+EL LTGMPT++ ++I A +GV+ ++V LG+KG L+V +
Sbjct: 177 VSKVDFFSPNETELATLTGMPTNNLDEIKRAAKHMIDLGVKNMMVTLGSKG-VLWVSKD- 234
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
++PA +V +DTTGAGD+F SFA F +G+ L+ A A++ V +G
Sbjct: 235 --SGELVPAVKVKAVDTTGAGDSFIGSFAHYFAQGEDVPTALKHANQYAAVTVTRQGTQK 292
Query: 363 SMP 365
S P
Sbjct: 293 SYP 295
>gi|444334035|ref|ZP_21149676.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|443550958|gb|ELT59031.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 331
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L P F+
Sbjct: 26 LVVLGSVNADHVIRVPRFARAGETLRGSGYRIAYGGKGANQAVAAARLKDPNTQVDFIAC 85
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G+ + A + G+ + ++ TG A++ + +G+NSI+I G N +C
Sbjct: 86 LGNDDIGRAMKAAFAKDGINTATITQIEQE--MTGVAMIQVADNGENSIVISAGAN-ACL 142
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S + A+ A+ G VI + A +P+ELL
Sbjct: 143 DEHLVSCYAVHIQQADALLMQLETPLSAICKAAQIAKQNGTKVILNPAPAQA-LPEELLR 201
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + ++A + H++GVQ VL+ LGAKG G+ I
Sbjct: 202 QLYMITPNETEAEILTGIKVEDKISAAQAAKRFHQLGVQIVLITLGAKGVYFSENGQGQI 261
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
AR DTT AGDTF + V +EGK+ +RFA AAA++ V +GA PS+P
Sbjct: 262 IGGFRVKAR--DTTAAGDTFNGALVVALLEGKTLTNAIRFAHAAAAISVTREGAQPSIPH 319
Query: 367 RKSVLNLL 374
R L+ L
Sbjct: 320 RAETLDFL 327
>gi|343496248|ref|ZP_08734351.1| ribokinase [Vibrio nigripulchritudo ATCC 27043]
gi|342821495|gb|EGU56269.1| ribokinase [Vibrio nigripulchritudo ATCC 27043]
Length = 308
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 163/307 (53%), Gaps = 8/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G I ++ G+ + + V D PTG A++ + DG+N+I + N E
Sbjct: 64 DAFGLNIRESFQRDGIDIRGVRVQPD--CPTGIAMIQVSDDGENTICLSAEANAKLSSEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E L+ ++ A +L+Q E P + A AA+ + V+ + P+P LL +D
Sbjct: 122 IQPE-LDQIRTANYLLMQLETPLDGVERAAVAAKESETRVVLNPAPA-CPLPDSLLRCVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG-EKPIKQ 308
+++PNE+E L+G+ E +A H+ G++ VL+ LGAKG L G K I
Sbjct: 180 VITPNETEAEVLSGIKVTDEESAQQAANVLHEKGIETVLITLGAKGVWLSQNGVGKGISS 239
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+ A +DTT AGDTF + G +E K E ++FA AAA+L V GA S+P RK
Sbjct: 240 YRVEA---VDTTAAGDTFNGALVTGLLENKPLESAIQFANAAAALSVTRFGAQTSIPTRK 296
Query: 369 SVLNLLQ 375
V + L+
Sbjct: 297 EVDDFLE 303
>gi|55670460|pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga
Maritima At 2.15 A Resolution
gi|55670461|pdb|1VM7|B Chain B, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga
Maritima At 2.15 A Resolution
Length = 311
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 158/308 (51%), Gaps = 21/308 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGED 130
VVGS+N DI +++D K GET A GGKGANQA AK+ FV +G D
Sbjct: 19 VVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGND 78
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
L+ + G+ Y+ V +PTG A + + GQN III G N E
Sbjct: 79 DYSDLLIENYEKLGIT-GYIRV----SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELI 133
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNF 247
D + ++ I+LLQ EIP ++ AK R G+ VIFD AP I +E+ +
Sbjct: 134 ---DWNTLSESDILLLQNEIPFETTLECAK--RFNGI-VIFDP----APAQGINEEIFQY 183
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+D L+PNE E+ L+ + + +A K ++GV+ V+VKLG KG L + EK K
Sbjct: 184 LDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEK--K 241
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ +DTT AGD F +FAV EGK+ EE + F AAA++ V GA S+P R
Sbjct: 242 HFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAR 301
Query: 368 KSVLNLLQ 375
+ V L+
Sbjct: 302 EEVEAFLK 309
>gi|374339675|ref|YP_005096411.1| ribokinase [Marinitoga piezophila KA3]
gi|372101209|gb|AEX85113.1| ribokinase [Marinitoga piezophila KA3]
Length = 306
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 153/310 (49%), Gaps = 17/310 (5%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH-PTYFVGQVGED 130
V+GS+N DI + ++ GET AK + GGKGANQA AKLS+ YF +G D
Sbjct: 4 VIGSSNMDIVLTVEHFTNPGETQKAKELEYFPGGKGANQAVAAAKLSNKEVYFFTALGND 63
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
GK + ++ V D +PTG A + + G+N I+I G N PE
Sbjct: 64 EFGKKLARNFDELNIK---GYVYTD--LPTGRAYIEVTKKGENRIVIFEGANGFITPE-I 117
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---ELLNF 247
++ + ++++ LLQ EIP + VAK +S VIFD AP P E+ +
Sbjct: 118 VEKKIGILQEYKYFLLQNEIPFETTLHVAKILKSKKKIVIFDP----APAPNITDEIFKY 173
Query: 248 IDILSPNESELGRLTG--MPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+D +PNE E L+ D + + E + K +G++ +++K G + L+
Sbjct: 174 VDYFTPNEEEFKYLSNKFFNLDPEKNLKEILRKFFNLGIKNIILKRGPEDVILY-NRNYI 232
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K VIDTT AGD F + A EGK+ +E + FA AAA L V KGA S+P
Sbjct: 233 LKIPAFKFENVIDTTAAGDVFNGALATALEEGKNIKEAIVFACAAAGLSVTRKGAQSSIP 292
Query: 366 DRKSVLNLLQ 375
RK V L+
Sbjct: 293 ARKEVDEFLE 302
>gi|306841204|ref|ZP_07473919.1| ribokinase [Brucella sp. BO2]
gi|306288726|gb|EFM60048.1| ribokinase [Brucella sp. BO2]
Length = 313
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 160/312 (51%), Gaps = 6/312 (1%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ GV TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALRQMREFGLDTGSVRVID--GVDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +T + A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITSIEPTDLVSAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA + P
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQAQPLHDCVRYGSAAGAIAVTRVGAGAAAP 301
Query: 366 DRKSVLNLLQYA 377
V L+ A
Sbjct: 302 TAHEVEELIGRA 313
>gi|172060577|ref|YP_001808229.1| ribokinase [Burkholderia ambifaria MC40-6]
gi|171993094|gb|ACB64013.1| ribokinase [Burkholderia ambifaria MC40-6]
Length = 308
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 137/296 (46%), Gaps = 4/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGARVTMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D + TG A++++ QN+I+IV G N PE
Sbjct: 71 DAHGAALRAGLEAEGI--DCARLATSAAASTGVALIVVDDASQNTIVIVAGGNGEVTPET 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 VARHD-AALAATDVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P A G + VL+ LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTGLPVRDPADAEAAARMLQAGGARNVLITLGARG-VLALPADGAARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + IDTT AGDTF FA G+ + +RFA AA+L V GA PS+P
Sbjct: 247 PAPVVQAIDTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPSIP 302
>gi|378949927|ref|YP_005207415.1| ribokinase [Pseudomonas fluorescens F113]
gi|359759941|gb|AEV62020.1| Ribokinase [Pseudomonas fluorescens F113]
Length = 304
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 157/301 (52%), Gaps = 10/301 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P +VV+GS N D+ RLP+ GET+ K+ T+ GGKGANQA A+L VG
Sbjct: 2 PAKVVVIGSLNMDLVTRAPRLPRGGETLIGKSFSTIPGGKGANQAVAAARLGAQVSMVGC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+ + L G+ ++VV+ +G A++++ + QN+I+IV G N +
Sbjct: 62 VGNDAYGEQLRGGLLAEGIDCQAVSVVEGA---SGVALIVVDDNSQNAIVIVAGANGALT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E D +V++ A +++ Q E+PD+ K AR G VI + +P +
Sbjct: 119 AEVLDSVD-DVLQSADVIICQLEVPDATVGHALKRARELGKIVILNPAPASRTLPADWYA 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE L+G+ DS E A G +V+V LGA+G +F G
Sbjct: 178 CIDYLIPNESEAAVLSGLAVDSLETAEAAAAHLIAAGAGKVIVTLGAQG-LMFANGA--- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
PA RV +DTT AGDTF FA GK+ + +RF AAA+L V GA PS+
Sbjct: 234 SFEHFPALRVKAVDTTAAGDTFVGGFAAALAGGKNEVDAIRFGQAAAALSVTRAGAQPSI 293
Query: 365 P 365
P
Sbjct: 294 P 294
>gi|148548440|ref|YP_001268542.1| ribokinase [Pseudomonas putida F1]
gi|148512498|gb|ABQ79358.1| ribokinase [Pseudomonas putida F1]
Length = 302
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 151/298 (50%), Gaps = 9/298 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLP+ GET+ + T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVVRAQRLPRAGETLPGDSFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V G +G A++ + + QN I+I+ G N P+
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVSTCPGTSSGVALITVDAASQNCIVIIPGANGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ A +V+ Q E+P AR G VI + P+P + ID
Sbjct: 123 VLRFD-ALLQAAEVVICQLEVPTGTVACTLARARELGKQVILNPAPATGPLPADWFAHID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNESE LTG+ + A + ++G +V++ LGA+G AL V +
Sbjct: 182 YLTPNESEAEALTGVAVTDQDSARRAGERLLQLGAGKVIITLGAQG-ALLVTAQ---GHQ 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA RV +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 238 HYPAPRVQPLDTTAAGDTFIGGFAAGLVRGLDEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|395444137|ref|YP_006384390.1| ribokinase [Pseudomonas putida ND6]
gi|388558134|gb|AFK67275.1| ribokinase [Pseudomonas putida ND6]
Length = 302
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 151/298 (50%), Gaps = 9/298 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLP+ GET+ + T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVVRAQRLPRAGETLPGDSFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V G +G A++ + + QN I+I+ G N P+
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVSTCPGTSSGVALITVDAASQNCIVIIPGANGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ A +V+ Q E+P AR G VI + P+P + ID
Sbjct: 123 VLRFD-ALLQAAEVVICQLEVPTGTVACTLARARELGKQVILNPAPATGPLPADWFAHID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNESE LTG+ + A + ++G +V++ LGA+G AL V +
Sbjct: 182 YLTPNESEAEALTGVAVTDQDSARRAGERLLQLGAGKVIITLGAQG-ALLVTAQ---GHQ 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA RV +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 238 HYPAPRVQPLDTTAAGDTFIGGFAAGLVRGLEEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|333030906|ref|ZP_08458967.1| ribokinase [Bacteroides coprosuis DSM 18011]
gi|332741503|gb|EGJ71985.1| ribokinase [Bacteroides coprosuis DSM 18011]
Length = 303
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 156/301 (51%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS+N D+ V+ RLP GET+ GGKGANQA A+L T FV + G
Sbjct: 4 ITVVGSSNTDMVVKSKRLPLPGETIGGGAFLMNPGGKGANQAVATARLGAKTVFVAKTGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ G+ D V D P+G A++M+ G+NSI++ G N PE
Sbjct: 64 DVFGRKSISTFENEGI--DTRFVSSDSTEPSGVALIMVDDHGENSIVVAPGANAKLLPED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E + + I+L+Q EIP A+ A ++GV V+ + + + ELL+ +
Sbjct: 122 I-EKAKEEISTSEILLMQLEIPMPAVEAAAQIAYASGVKVVLNPAPVQV-LSAELLSKLY 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN E L+G+ E +A GVQ V++ LG++GS + GE + ++
Sbjct: 180 LITPNRGEAELLSGIKITGLESAEKAARAIAAKGVQNVIITLGSEGSFILDNGEAYLVKA 239
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+DTTGAGDTF + VEGKS E + FA+ A+++ V GA S+P R+
Sbjct: 240 Y--EVETVDTTGAGDTFNGAICSALVEGKSMREAVNFASKASAIVVTRMGAQSSIPTRRE 297
Query: 370 V 370
V
Sbjct: 298 V 298
>gi|265993534|ref|ZP_06106091.1| ribokinase [Brucella melitensis bv. 3 str. Ether]
gi|262764404|gb|EEZ10436.1| ribokinase [Brucella melitensis bv. 3 str. Ether]
Length = 313
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 161/314 (51%), Gaps = 6/314 (1%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFV 124
P + V GS N D+ + LP+ +TV A GGKGANQA AKL FV
Sbjct: 5 EAPLKIFVFGSVNVDVSARMAVLPRPEQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFV 64
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
G VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N +
Sbjct: 65 GAVGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-A 121
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQE 243
W D + KA I LLQRE+P N+ VAKA R+AG V+ + + DA +
Sbjct: 122 RWSSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLEPAPVGDASQMAD 181
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
L+ DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 182 LIALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE 241
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+K +V+DT AGD+F FAV F + + +C+R+ +AA ++ V GA +
Sbjct: 242 --VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQARPLHDCVRYGSAAGAIAVTRVGAGAA 299
Query: 364 MPDRKSVLNLLQYA 377
P + V L+ A
Sbjct: 300 APTAREVEELIGRA 313
>gi|416069665|ref|ZP_11583341.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|347999774|gb|EGY40589.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
Length = 308
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L P F+
Sbjct: 5 LVVLGSVNADHVIRVPRFARAGETLRGSGYRIAYGGKGANQAVAAARLKDPNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G+ + A + G+ + ++ TG A++ + +G+NSI+I G N +C
Sbjct: 65 LGNDDIGRAMKAAFAKDGINTATITQIEQE--MTGVAMIQVADNGENSIVISAGAN-ACL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S + A+ A+ G VI + A +P+ELL
Sbjct: 122 DEHLVSCYAVHIQQADALLMQLETPLSAICKAAQIAKQNGTKVILNPAPAQA-LPEELLR 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + ++A + H++GVQ VL+ LGAKG G+ I
Sbjct: 181 QLYMITPNETEAEILTGIKVEDKISAAQAAKRFHQLGVQIVLITLGAKGVYFSENGQGQI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
AR DTT AGDTF + V +EGK+ +RFA AAA++ V +GA PS+P
Sbjct: 241 IGGFRVKAR--DTTAAGDTFNGALVVALLEGKTLTNAIRFAHAAAAISVTREGAQPSIPH 298
Query: 367 RKSVLNLL 374
R L+ L
Sbjct: 299 RAETLDFL 306
>gi|52082131|ref|YP_080922.1| ribokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52005342|gb|AAU25284.1| ribokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
Length = 293
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 159/304 (52%), Gaps = 22/304 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + P GETV ++ +T+ GGKGANQA A+L + +G VG+
Sbjct: 4 ICVIGSSSMDLVVTSPKRPAAGETVLGESFKTVPGGKGANQAVAAARLGAEVHMIGCVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I D GV DY+ V T H V+ +DG NSII+V G N PE
Sbjct: 64 DHYGKAILDNFQANGVLTDYVEPVTGQESGTAHIVL---ADGDNSIIVVKGANDHVTPE- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + L +K+A IVL+Q+EIP+ V+ S G+P++ + P+ E +
Sbjct: 120 YVQKALPAIKQADIVLIQQEIPEETVDYVSGLCSSLGIPLLLNPAPAR-PLRPETVEHAA 178
Query: 250 ILSPNESELGRL-TGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE E L GM + EA+ K +++ + G G V +++
Sbjct: 179 YITPNEHEASVLFQGMSRE------EAL----KRYPEKLFITEGKNG----VRYHNGLEE 224
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++P+ V IDTTGAGDTF A FAV EG+S E LRFA AASL V GA MP
Sbjct: 225 RVVPSFPVNAIDTTGAGDTFNAGFAVALSEGQSIESALRFANRAASLSVLKFGAQGGMPK 284
Query: 367 RKSV 370
R V
Sbjct: 285 RDEV 288
>gi|422654276|ref|ZP_16717022.1| ribokinase [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330967305|gb|EGH67565.1| ribokinase [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 306
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 158/309 (51%), Gaps = 15/309 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 VVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL R+D V GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGQQLRAAL--LAERIDCQAVTVVEGVSTGIASIVVDANSQNAIVIVAGGNGRLTPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F D L V + IV+ Q E+P AR+ G VI + P+P
Sbjct: 123 IERF-DALLAVSE---IVICQLEVPTETVFHTLSRARALGKTVILNPAPASEPLPASWYG 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS +A G + V++ LG +G+ LF
Sbjct: 179 LIDYLIPNESEAHTLTGVTVDSSAAAEQAATAMLAAGARNVIITLGERGT-LFANAAGVE 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA RV +DTT AGDTF FA G+ + +RF AAA++ V GA PS+
Sbjct: 238 H---IPARRVQAVDTTAAGDTFVGGFAAALAAGQGESQAIRFGQAAAAISVTRAGAQPSI 294
Query: 365 PDRKSVLNL 373
P + V L
Sbjct: 295 PTFEEVQEL 303
>gi|300173482|ref|YP_003772648.1| ribokinase [Leuconostoc gasicomitatum LMG 18811]
gi|333447724|ref|ZP_08482666.1| ribokinase [Leuconostoc inhae KCTC 3774]
gi|299887861|emb|CBL91829.1| ribokinase [Leuconostoc gasicomitatum LMG 18811]
Length = 303
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 166/307 (54%), Gaps = 17/307 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA A+ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLVGETMALTDVTTAPGGKGANQAVAAARQGANVSFIGSVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + L GV ++ V + VPTG A +MLQ +G N+I+I GG N +
Sbjct: 65 DSNGQFMRATLLSNGVNVNA--VTTNSEVPTGSAYIMLQENGANTILIHGGANQAL---T 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D V+ KA ++ Q E+P V + K A++ V I + + EL + D
Sbjct: 120 VADLDENVIAKADTLIAQFEVPLEVIVAAFKIAKANNVQTILNPAPAVYDLIPELTHVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYE----QISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
I+ PNE+E LTG+ ++ E ++S A++ GV + ++ LG GS FV ++
Sbjct: 180 IILPNETEAQLLTGITVENNEAVLNRVSNAIL---AKGVPRSIITLGDAGS--FV-ADRD 233
Query: 306 IKQSIIP-AARVIDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ + P +DTTGAGDTF + A V + + EE ++ A+ A+++ V GAIPS
Sbjct: 234 KRWWVKPNKVDAVDTTGAGDTFIGTLASVIDADFNNLEETVKRASIASAIAVTRAGAIPS 293
Query: 364 MPDRKSV 370
+P R V
Sbjct: 294 IPTRDEV 300
>gi|257486179|ref|ZP_05640220.1| ribokinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422598979|ref|ZP_16673231.1| ribokinase [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422681165|ref|ZP_16739435.1| ribokinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330989248|gb|EGH87351.1| ribokinase [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010509|gb|EGH90565.1| ribokinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 306
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 157/306 (51%), Gaps = 15/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGGSVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL + + VV+ GV TG A +++ + QN+I+IV G N P
Sbjct: 65 DAYGEQLRAALLAEHIDCQAVTVVE--GVSTGIASIVVDASSQNAIVIVAGGNGRLTPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F ++ +GI++ Q E+P AR+ G VI + P P
Sbjct: 123 IERFD----ALLAGSGIIICQLEVPTETVFHTLTRARALGKTVILNPAPASEPFPANWYG 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS EA G + V++ LG +G+ LF
Sbjct: 179 LIDYLIPNESEAQTLTGVTVDSSAAAEEAAATMLAAGARNVIITLGERGT-LFASAAGVE 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA RV +DTT AGDTF FA G+S + +RF AAA++ V GA PS+
Sbjct: 238 H---IPARRVQAVDTTAAGDTFVGGFAAALAAGQSESQAIRFGQAAAAISVTRAGAQPSI 294
Query: 365 PDRKSV 370
P + V
Sbjct: 295 PTFEEV 300
>gi|184156218|ref|YP_001844558.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|260662448|ref|ZP_05863343.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
gi|385812775|ref|YP_005849166.1| ribokinase [Lactobacillus fermentum CECT 5716]
gi|183227562|dbj|BAG28078.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|260553139|gb|EEX26082.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
gi|299783672|gb|ADJ41670.1| Ribokinase [Lactobacillus fermentum CECT 5716]
Length = 315
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 164/298 (55%), Gaps = 11/298 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS ++ +IDR+PK+GETV+A + GGKGANQA A+L + +VG
Sbjct: 5 ITVIGSNMMELTTDIDRMPKLGETVSAPSFHMAFGGKGANQAYAAAQLGSSVAMISKVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + G+ + ++V G G A +Q + NSII+V G N P+
Sbjct: 65 DSLGQAYLEHFQQSGIDITGVSV---GNQSNGVAPCFIQGN-MNSIIVVQGANSELTPDV 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D+ +++K + +V+LQ+EI + + + A VPV+ + + + E + +
Sbjct: 121 L-DQYTDLIKSSKMVILQQEISLATDYRAIDLAEQFHVPVMLNPAPANDNVDLEHITKCE 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
SPNE+ELGRLT +P +S +QI +A GV+ V+V +G++G AL+V + +
Sbjct: 180 FYSPNETELGRLTHLPVESIDQIKDAAHSLVDQGVKNVIVTIGSRG-ALWVCAD---HEE 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+IP+ +V +D+ GAGD+F +FA + G+ LR A A A++ V + G+ S P
Sbjct: 236 LIPSYKVNAVDSIGAGDSFVGAFAHYYTNGEDIPTALRHANAYAAVTVTMSGSQTSYP 293
>gi|404491013|ref|YP_006715119.1| ribokinase RbsK [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52350023|gb|AAU42657.1| ribokinase RbsK [Bacillus licheniformis DSM 13 = ATCC 14580]
Length = 295
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 159/304 (52%), Gaps = 22/304 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + P GETV ++ +T+ GGKGANQA A+L + +G VG+
Sbjct: 6 ICVIGSSSMDLVVTSPKRPAAGETVLGESFKTVPGGKGANQAVAAARLGAEVHMIGCVGD 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I D GV DY+ V T H V+ +DG NSII+V G N PE
Sbjct: 66 DHYGKAILDNFQANGVLTDYVEPVTGQESGTAHIVL---ADGDNSIIVVKGANDHVTPE- 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + L +K+A IVL+Q+EIP+ V+ S G+P++ + P+ E +
Sbjct: 122 YVQKALPAIKQADIVLIQQEIPEETVDYVSGLCSSLGIPLLLNPAPAR-PLRPETVEHAA 180
Query: 250 ILSPNESELGRL-TGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE E L GM + EA+ K +++ + G G V +++
Sbjct: 181 YITPNEHEASVLFQGMSRE------EAL----KRYPEKLFITEGKNG----VRYHNGLEE 226
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++P+ V IDTTGAGDTF A FAV EG+S E LRFA AASL V GA MP
Sbjct: 227 RVVPSFPVNAIDTTGAGDTFNAGFAVALSEGQSIESALRFANRAASLSVLKFGAQGGMPK 286
Query: 367 RKSV 370
R V
Sbjct: 287 RDEV 290
>gi|339486942|ref|YP_004701470.1| ribokinase [Pseudomonas putida S16]
gi|338837785|gb|AEJ12590.1| ribokinase [Pseudomonas putida S16]
Length = 302
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 155/299 (51%), Gaps = 11/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVARAQRLPRAGETLPGESFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V GV +G A++ + + QN I+I+ G N P+
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVTTCQGVSSGVALITVDAASQNCIVIIPGGNGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D +++ A +++ Q E+P D+V +A+ R G VI + P+P + I
Sbjct: 123 VQRFD-ALLQAAEVIICQLEVPADTVAWTLAR-GRELGKRVILNPAPATGPLPADWFAHI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L+PNESE LTG+ + A + ++G +V++ LGA+G+ L P
Sbjct: 181 DYLTPNESEAEALTGVAVTDLDSARRAGERLLQLGAGKVIITLGAQGALLV----TPQGH 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA V +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 237 QHFPAPVVQPLDTTAAGDTFIGGFAAGLVRGLGEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|392950349|ref|ZP_10315906.1| Ribokinase [Lactobacillus pentosus KCA1]
gi|334881310|emb|CCB82160.1| ribokinase [Lactobacillus pentosus MP-10]
gi|339638057|emb|CCC17098.1| ribokinase [Lactobacillus pentosus IG1]
gi|392434631|gb|EIW12598.1| Ribokinase [Lactobacillus pentosus KCA1]
Length = 306
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ K + GGKGANQA + T+F+G VG+
Sbjct: 4 VTVIGSINLDRTIRVKNMPKPGETIHTKEIFSAGGGKGANQAVAAQRSGAKTHFIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + D L+ + L + K TG A V + G+N I+I GG NM+ P+
Sbjct: 64 DDAGKTMLDLLTQEKINL--AGITKMTKQSTGQAYVTVDDAGENQIMIHGGANMAFTPDD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++++ + V+ Q E ++ K A++AGV I + +P ELL D
Sbjct: 122 VAAH-RDIIEASDFVVAQFESAVDSTVEAFKIAQAAGVKTILNPAPAMEKVPAELLAVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H++G+ V++ +G+KG+ + G +
Sbjct: 181 MIVPNETETETLTGIAITDEASMMKASAALHELGISAVIITIGSKGAFYDING----RHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+IPA +V +DTT AGDTF + + + S E+ +R+ A+S+ VQ GA PS+P
Sbjct: 237 VIPAFKVEAVDTTSAGDTFIGAMSSVLDKDFSNLEDAIRYGNRASSIAVQRFGAQPSIPY 296
Query: 367 RKSV 370
+ +
Sbjct: 297 KNEI 300
>gi|148825217|ref|YP_001289970.1| ribokinase [Haemophilus influenzae PittEE]
gi|229846590|ref|ZP_04466698.1| ribokinase [Haemophilus influenzae 7P49H1]
gi|148715377|gb|ABQ97587.1| ribokinase [Haemophilus influenzae PittEE]
gi|229810683|gb|EEP46401.1| ribokinase [Haemophilus influenzae 7P49H1]
Length = 306
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 157/312 (50%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K ET+ + Q GGKGANQA +L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPSETLTGQNYQIAYGGKGANQAVAATRLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +A + G+ ++N V TG A + + +NSI++ G N + E
Sbjct: 65 DSIGKTMKNAFAQEGIDTTHINTVSQE--MTGMAFIQVAKSSENSIVLASGAN-AHLGEM 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + ++ +L+Q E P S A+ A+ GV V+ + AP + ELL+
Sbjct: 122 VVRQSEAQIAQSDCLLMQLETPLSGVELAAQIAKKNGVKVVLN----PAPAQILSDELLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + EA HK G+ V++ LG KG + GE
Sbjct: 178 LIDIITPNETEAEILTGVQVSDEQSAVEAAQVFHKKGIDCVMITLGEKGVFVSQNGET-- 235
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
II RV +DTT AGDTF F +EG+S E +RF AAA++ V KGA PS+
Sbjct: 236 --RIINGFRVKAVDTTAAGDTFNGGFVTALLEGQSFENAVRFGQAAAAISVTRKGAQPSI 293
Query: 365 PDRKSVLNLLQY 376
P R+ L L +
Sbjct: 294 PTRQETLEFLAH 305
>gi|365902228|ref|ZP_09440051.1| ribokinase [Lactobacillus malefermentans KCTC 3548]
Length = 301
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 162/306 (52%), Gaps = 10/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+P+ GET++A + GGKG+NQA ++L + VG
Sbjct: 4 ITVIGSNMIDLMTYIDRMPEEGETISAPSFSMGFGGKGSNQAIAASRLGSDVAMITAVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ D G++ D ++ G +G A + ++ N IIIV G N P+
Sbjct: 64 DEFGQQQLDNYQENGIKTD---MIIHGKANSGVAPIFVEPTSGNRIIIVKGANDELTPDA 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D+ ++ + +++LQ+EIP N + + AR+A VPV+ + I +E +N +
Sbjct: 121 L-DQFKSQIQSSKLIVLQQEIPLETNYRAIEIARAANVPVLLNPAPAVEGINREFVNQVQ 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+PNE+EL +TGMP +S ++I A K GV+ ++V +G++G + +
Sbjct: 180 FYAPNETELSTITGMPVESIDEIKAAAHKLIDEGVENLIVTIGSRGVLWVCKDDF----K 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+I A +V +DTTGAGD+F +FA +V G+S E L+ A A++ V KG S P
Sbjct: 236 LIDAHKVDAVDTTGAGDSFIGAFAHYYVAGESVSEALQHANDYAAVTVTRKGTQKSYPTA 295
Query: 368 KSVLNL 373
+ NL
Sbjct: 296 AELKNL 301
>gi|225875016|ref|YP_002756475.1| ribokinase [Acidobacterium capsulatum ATCC 51196]
gi|225792309|gb|ACO32399.1| ribokinase [Acidobacterium capsulatum ATCC 51196]
Length = 312
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 152/314 (48%), Gaps = 20/314 (6%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
P++V+G D+ +LP GETV + T GGKG NQA A+L TYF+ ++G
Sbjct: 7 PILVMGIFALDLAFRTHKLPAWGETVVGSSLATAPGGKGTNQAIAAARLGAETYFLSKIG 66
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWP 187
DA G + A GVR D++ +D TG A ++L + G+N+I++ G+ +
Sbjct: 67 MDAFGHIAEAAYREAGVRTDFLR--RDPHAATGAAAILLDDASGENAIVVSPGSASALTT 124
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP-----Q 242
+ D E + ++ L Q E+P + ARS GVP + + P P +
Sbjct: 125 AEI-DAAHEAIARSACFLTQCELPLPLVRHALGLARSLGVPTVLN------PAPAVAGAE 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
LL D ++PNE E LTG+P + + A G + ++ LGA+G+ +V+
Sbjct: 178 SLLPLCDFVTPNEHEAQALTGLPVSTLAEAEAAADVLLARGARHAILTLGARGA--YVKS 235
Query: 303 EKPIKQSI--IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+KQ I A V+DTTGAGD F A FA EG RF A A + V G
Sbjct: 236 AT-LKQHIPAFDAGPVVDTTGAGDAFNAGFAAALAEGMGVIRAARFGCAVAGIAVTRPGT 294
Query: 361 IPSMPDRKSVLNLL 374
PSMP R V LL
Sbjct: 295 SPSMPRRHEVEALL 308
>gi|407771615|ref|ZP_11118969.1| Ribokinase, bacterial [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407285409|gb|EKF10911.1| Ribokinase, bacterial [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 307
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 14/313 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS+N D + +LPK G+TV+AK T GGKG NQA A+L F+ ++G
Sbjct: 3 IAIVGSSNIDFAARVAQLPKPGQTVSAKDYMTGPGGKGCNQAIAVARLGQMPVFISKIGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + D L+ G D +++ TG A++ + G+N I + GG NM+
Sbjct: 63 DVLGRSLIDTLNAEG--FDTNQLIQSADAQTGTALISIDDAGENIITVAGGANMTMSRAD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP-----QEL 244
++ + ++ +L+Q E P K AR AG +I D AP+P ++L
Sbjct: 121 IREKQV-FLEHCNYLLVQLECPVVAIACAMKYAREAGATIILDP----APVPDRVVLRDL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
+ DI++PN +E +TG+ D+ E A K H+MG + V++K+G++G A + +G++
Sbjct: 176 MELTDIVTPNINECSAMTGIHPDNDETAHAAASKLHEMGARIVVIKMGSRG-AFYSDGDQ 234
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ A IDT AGD F AV +G+ + +RFA A +L GA +
Sbjct: 235 SGRVEPFDVA-AIDTVAAGDCFNGGLAVALHDGRPLRDAVRFACATGALATTRYGAADAA 293
Query: 365 PDRKSVLNLLQYA 377
P VL+L++ A
Sbjct: 294 PTLDQVLSLMESA 306
>gi|335357862|ref|ZP_08549732.1| ribokinase [Lactobacillus animalis KCTC 3501]
Length = 301
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 158/299 (52%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + + K GET+ A + GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINLDRTIRVKEMAKPGETIHASEVFSAGGGKGANQAVAAKRSGAKTAFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + + L ++LD + + V TG A +++ G+NSI+I G N PE
Sbjct: 64 DDAGKTMRELLGYEEIQLD--GIAELDKVATGQAYIVVDEKGENSIMIHAGANGKITPEH 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E +++K++ V+ Q E + I+ + A AGV I + +P+ELL D
Sbjct: 122 V-VEHADLIKESDFVIAQFESNLASTIKAFEVAHQAGVKTILNPAPAMRTVPEELLKTTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ E + +A K H +G++ VL+ +G+KGS ++G+
Sbjct: 181 VIAPNETETEILTGIKVVDEESMRKAAAKLHALGIKVVLITIGSKGSFYSMDGQ----SG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF + + S E + + A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTAAGDTFIGALSTVLKPDFSNLVEAITYGNKASSLTVQRFGAQPSIP 295
>gi|322835083|ref|YP_004215110.1| ribokinase [Rahnella sp. Y9602]
gi|384260306|ref|YP_005404240.1| ribokinase [Rahnella aquatilis HX2]
gi|321170284|gb|ADW75983.1| ribokinase [Rahnella sp. Y9602]
gi|380756282|gb|AFE60673.1| ribokinase [Rahnella aquatilis HX2]
Length = 309
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 159/308 (51%), Gaps = 12/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I+ P+ GETV K GGKGANQA + F+ VG+
Sbjct: 6 LVVLGSINADHILNINHFPQPGETVIGKQYTVAFGGKGANQAVAAGRSGADISFIACVGD 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L+ + + +KD TG A++ + ++G+N I I G N + PE
Sbjct: 66 DDIGERVRKQLASDHIDTHPIEAIKD--TTTGVALIFVNAEGENVIGIDAGANKAVTPE- 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ D + V A +L+Q E P I +K A+ G VI + AP +P ELL
Sbjct: 123 YLDRYKQQVIGASALLMQLESPLETVIAASKIAKDNGTQVILNP----APACELPDELLA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E +LTG+ DS E + A H G+ V++ LG+KG L GE +
Sbjct: 179 RVDIITPNETEAEKLTGIKVDSNEDAARAANALHDKGITTVIITLGSKGVWLSQNGEGKL 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ +DT AGDTF + +EGK + +RFA AAA++ V GA PS+P
Sbjct: 239 VAGF--RVKAVDTIAAGDTFNGALVTALLEGKPMDSAVRFAHAAAAIAVTRPGAQPSVPW 296
Query: 367 RKSVLNLL 374
RK + + L
Sbjct: 297 RKEIDDFL 304
>gi|167771698|ref|ZP_02443751.1| hypothetical protein ANACOL_03070 [Anaerotruncus colihominis DSM
17241]
gi|167666338|gb|EDS10468.1| putative ribokinase [Anaerotruncus colihominis DSM 17241]
Length = 333
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 170/323 (52%), Gaps = 17/323 (5%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+N P ++VVGS D+ V ++ P GETV K+ +T GGKGANQA A+L
Sbjct: 1 MNRKPKILVVGSFVMDLIVSTEKFPGSGETVLGKSFRTAPGGKGANQAVQAARLGADVTM 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQ-SDGQ---NSIIIVG 179
VG+VG D+ G+ + + G+ + +++D P+ ++L+ ++GQ N II+V
Sbjct: 61 VGKVGGDSFGRELIASAQAAGIHTQH--ILQDPDNPSAIGNILLEVAEGQKSKNRIIVVS 118
Query: 180 GTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP 239
G NM+ P+ ++V + +V+LQ EIP +N VA+ A GVPV+ ++ AP
Sbjct: 119 GANMAITPDDVAFVR-DIVSEFDMVMLQLEIPMQINELVAQYAFEKGVPVMLNSAP-SAP 176
Query: 240 IPQELLNFIDILSPNESELGRLTGMP------TDSYEQISEAVVKCHKMGVQQVLVKLGA 293
+ LL+ + +SPNE E LTG+P + + + + + GVQ V++ LG+
Sbjct: 177 LSAALLSHLTYISPNEHEAADLTGIPIRKEGKSVNRDDLDAVIASLRGKGVQNVIITLGS 236
Query: 294 KGSALFVEGEKPIKQS-IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
G+ V G+ I S + V D T AGD+F +F G ++ + L FA A+
Sbjct: 237 AGAV--VAGDSGIDFSPCVDVVEVKDPTAAGDSFVGAFCTAVCAGLNQRQALDFANYTAT 294
Query: 353 LCVQVKGAIPSMPDRKSVLNLLQ 375
+ V GA PS+P V+ L+Q
Sbjct: 295 ITVSQMGAQPSLPHLADVIELMQ 317
>gi|227515240|ref|ZP_03945289.1| possible ribokinase [Lactobacillus fermentum ATCC 14931]
gi|227086396|gb|EEI21708.1| possible ribokinase [Lactobacillus fermentum ATCC 14931]
Length = 315
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 164/298 (55%), Gaps = 11/298 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS ++ +IDR+PK+GETV+A + GGKGANQA A+L + +VG
Sbjct: 5 ITVIGSNMMELTTDIDRMPKLGETVSAPSFHMAFGGKGANQAYAAAQLGSSVAMISKVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + G+ + ++V G G A +Q + NSII+V G N P+
Sbjct: 65 DSLGQAYLEHFQQSGIDITGVSV---GNQSNGVAPCFIQGN-MNSIIVVQGANSELTPDV 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D+ +++K + +V+LQ+EI + + + A VPV+ + + + E + +
Sbjct: 121 L-DQYTDLIKSSKMVILQQEISLATDYRAIDLAEQFHVPVMLNPAPANDNVDLEHITKCE 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
SPNE+ELGRLT +P +S +QI +A GV+ V+V +G++G AL+V + +
Sbjct: 180 FYSPNETELGRLTHLPVESIDQIKDAAHSLVDQGVKNVIVTIGSRG-ALWVCAD---HEE 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+IP+ +V +D+ GAGD+F +FA + G+ LR A A A++ V + G+ S P
Sbjct: 236 LIPSYKVNAVDSIGAGDSFVGAFAHYYTNGEDIPTTLRHANAYAAVTVTMSGSQTSYP 293
>gi|397696175|ref|YP_006534058.1| ribokinase [Pseudomonas putida DOT-T1E]
gi|421521793|ref|ZP_15968444.1| ribokinase [Pseudomonas putida LS46]
gi|397332905|gb|AFO49264.1| ribokinase [Pseudomonas putida DOT-T1E]
gi|402754401|gb|EJX14884.1| ribokinase [Pseudomonas putida LS46]
Length = 302
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 156/299 (52%), Gaps = 11/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLP+ GET+ + T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVVRAQRLPRAGETLPGDSFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V G +G A++ + + QN I+I+ G N P+
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVSTCPGTSSGVALITVDAASQNCIVIIPGANGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D +++ A +V+ Q E+P D+V +A+ AR G VI + P+P + I
Sbjct: 123 VLRFD-ALLQAAEVVICQLEVPTDTVACTLAR-ARELGKQVILNPAPATGPLPADWFAHI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L+PNESE LTG+ + A + ++G +V++ LGA+G AL V +
Sbjct: 181 DYLTPNESEAEALTGVAVTDQDSARRAGERLLQLGAGKVIITLGAQG-ALLVTAQ---GH 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA RV +DTT AGDTF FA V G E + F AA+L V GA PS+P
Sbjct: 237 QHYPAPRVQPLDTTAAGDTFIGGFAAALVRGLKEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|417844511|ref|ZP_12490553.1| Ribokinase [Haemophilus haemolyticus M21639]
gi|341956708|gb|EGT83127.1| Ribokinase [Haemophilus haemolyticus M21639]
Length = 306
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 12/311 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + Q GGKGANQA A+L F+ +G
Sbjct: 5 LTVLGSINADHVISVPYFAKPGETLTGQNYQIAYGGKGANQAVAAARLGAKVAFISCIGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + +A + R+D ++ TG A + + G+NSI++ G N
Sbjct: 65 DSIGETMKNAFAK--ERIDTTHISTVSQEMTGMAFIQVAQSGENSIVLASGANAHLGEIV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
++++ + + +L+Q E P S A+ A+ GV V+ + AP + +LL+
Sbjct: 123 VRQSEVQIAQ-SDCLLMQLETPLSGVELAAQIAKKNGVKVMLN----PAPAQILSDKLLS 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
IDI++PNE+E LTG+ + +A H G++ V++ LGAKG + +G+ I
Sbjct: 178 LIDIITPNETEAEILTGVTVTDEQSAVKAASVFHDKGIETVMITLGAKGVFVSRKGKSRI 237
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + IDTT AGDTF F +E KS +E +RF AAA++ V KGA S+P
Sbjct: 238 IKGF--CVQAIDTTAAGDTFNGGFVTALLEEKSFDEAIRFGQAAAAISVTKKGAQSSIPT 295
Query: 367 RKSVLNLLQYA 377
R+ L+ L+YA
Sbjct: 296 RQETLDFLEYA 306
>gi|333398508|ref|ZP_08480321.1| ribokinase [Leuconostoc gelidum KCTC 3527]
Length = 303
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 163/306 (53%), Gaps = 15/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA A+ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLVGETMALTDVTTAPGGKGANQAVAAARQGANVSFIGSVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + L GV ++ V + VPTG A +MLQ +G N+I+I GG N +
Sbjct: 65 DSNGQFMRATLLTNGVNVNA--VTTNSEVPTGSAYIMLQENGANTILIHGGANQAL---T 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D V+ KA ++ Q E+P V + K A++ V I + + EL++ D
Sbjct: 120 VADLDKNVIAKADTLIAQFEVPLEVIVAAFKIAKANNVQTILNPAPAVYDLTPELMHVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYE----QISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
I+ PNE+E LTG+ ++ E ++S A++ GV + ++ LG GS FV
Sbjct: 180 IILPNETEAQLLTGIAIENDEVVLNRVSNAIL---AKGVSRSIITLGDAGS--FVADRDQ 234
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ +DTTGAGDTF + A V + + +E ++ A+ A+++ V GAIPS+
Sbjct: 235 RWWAKPNNVDAVDTTGAGDTFIGTLASVIDADFNNLDEAVKRASIASAIAVTRAGAIPSI 294
Query: 365 PDRKSV 370
P R V
Sbjct: 295 PTRDEV 300
>gi|413950839|gb|AFW83488.1| hypothetical protein ZEAMMB73_639639, partial [Zea mays]
gi|413950840|gb|AFW83489.1| hypothetical protein ZEAMMB73_639639, partial [Zea mays]
Length = 111
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/93 (77%), Positives = 85/93 (91%)
Query: 283 GVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREE 342
GVQ+VLVKLG++GSALFVEGE+PI+Q I+PA VIDTTGAGDTFT++FAV VEGK + E
Sbjct: 14 GVQEVLVKLGSQGSALFVEGEEPIRQPIVPATEVIDTTGAGDTFTSAFAVALVEGKPKRE 73
Query: 343 CLRFAAAAASLCVQVKGAIPSMPDRKSVLNLLQ 375
C+RFAAAAASLCV+VKGAIPSMPDRKSV+ LL+
Sbjct: 74 CMRFAAAAASLCVRVKGAIPSMPDRKSVMKLLE 106
>gi|300867765|ref|ZP_07112409.1| Ribokinase [Oscillatoria sp. PCC 6506]
gi|300334232|emb|CBN57581.1| Ribokinase [Oscillatoria sp. PCC 6506]
Length = 309
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 156/306 (50%), Gaps = 17/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ + RLP GET+ T GGKGANQA ++L T+ +G+VG
Sbjct: 3 IIVFGSINIDLIAKTPRLPLPGETLLGHNFFTAGGGKGANQAVATSQLGITTHLIGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L G+ D ++ D +G A++ ++ GQN+II+V G N +C
Sbjct: 63 DHFGQELLTNLQFYGLNTD--KILIDKSTHSGIAIIAVEDSGQNNIIVVPGAN-NC---- 115
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
D DLE +K+ A +LLQ EIP V AK AR A V VI D + IP +
Sbjct: 116 INDTDLERLKEILPTATALLLQLEIPLQVVQAAAKLAREASVKVILDPAPFRSDIPTDFY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE E +L G P ++ E ++A + +GV ++KLG+KG E
Sbjct: 176 PLIDIITPNEIEASQLVGFPVNNPETATQAADQLRHLGVNNAIIKLGSKGVVCATADET- 234
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
IPA V +DT AGD F A G S E + + AAA +LC GA +
Sbjct: 235 ---FFIPAFTVEAVDTVAAGDAFNGGLAAALDTGLSLREAVVWGAAAGALCATKNGAQSA 291
Query: 364 MPDRKS 369
M DR +
Sbjct: 292 MCDRAT 297
>gi|378774779|ref|YP_005177022.1| ribokinase [Pasteurella multocida 36950]
gi|356597327|gb|AET16053.1| ribokinase [Pasteurella multocida 36950]
Length = 306
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 159/308 (51%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAKPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N + E
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGAN-AYLTET 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ + +A +L+Q E P S I AK A+SA V+ + P+P ELL +D
Sbjct: 121 VVEQFANKITQADTLLMQLETPLSAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLMQLD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ S+A H+ G++ VL+ LG+KG +K
Sbjct: 180 MITPNETETEILTGVKVVDEHSASQAAALFHQKGIETVLITLGSKG---VYASQKGTPGK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++ RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+P R
Sbjct: 237 MVAGFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSIPTR 296
Query: 368 KSVLNLLQ 375
+ LN LQ
Sbjct: 297 QETLNFLQ 304
>gi|365926570|ref|ZP_09449333.1| ribokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420266113|ref|ZP_14768611.1| ribokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426352|gb|EJE99201.1| ribokinase [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 301
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 157/307 (51%), Gaps = 17/307 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D+ +EI RLPK GET+ K+ T GGKGANQA + T F+G+VG+
Sbjct: 4 ITILGSINVDVILEISRLPKPGETMPMKSLSTAGGGKGANQAIAAVRSGAATTFIGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + L + D +V+ G TG A ++LQ GQNSIII GGTN +
Sbjct: 64 DAYGEKMLTILKENNI--DTSSVIIKKGGQTGQAYILLQESGQNSIIINGGTNREITADD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+K A ++ Q E+ ++ A V I + AP I +LL
Sbjct: 122 VIKAQ-NSIKNADFLIAQFEVDIERILEAFIIAHKNKVVTILNP----APAKDITDDLLK 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D++ PNE E +TG+ +EA + GV+ V++ LG++G+ E E
Sbjct: 177 LTDLIVPNEIEAQMMTGIEITDENTAAEAAKILRERGVKNVIITLGSQGAYYLTENE--- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+IPA +V IDTT AGDTF + + +E +++A A+S+ VQ GAIPS
Sbjct: 234 -DGLIPALKVNAIDTTAAGDTFIGALCSQLGNNLANIKEAIKYATKASSITVQTLGAIPS 292
Query: 364 MPDRKSV 370
+P K V
Sbjct: 293 IPTIKQV 299
>gi|194466697|ref|ZP_03072684.1| ribokinase [Lactobacillus reuteri 100-23]
gi|194453733|gb|EDX42630.1| ribokinase [Lactobacillus reuteri 100-23]
Length = 307
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 17/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D +++ R+P GET+AA + AGGKGANQA + T FVGQVG+
Sbjct: 5 VTIVGSLNVDTTMKVKRMPLPGETIAALSKTNAAGGKGANQAVAAVRSGAETAFVGQVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK++ + L V D + D TG A ++L GQNSI++ GG N ++
Sbjct: 65 DAGGKMMINDLKNNNV--DTTGIHVDDQAGTGSAAILLDESGQNSILVYGGANQQLSVKE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D + + A V+ Q E P ++ + A+ GV I + AP I +LL
Sbjct: 123 VEDA-RDQIAAADFVIAQFETPQEATLRAFQIAKENGVKTILNP----APAHEINPDLLK 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D++ PNE+E LTG+ + + K +MGV+ +++ +GAKG+ +
Sbjct: 178 LTDLIIPNETESAALTGIIITDETSMLMSAAKFAQMGVRNLIITVGAKGAFYCTQD---- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
+ IPA +V +DTT AGDTF + + S E+ + +A A+SL VQ GA+PS
Sbjct: 234 GYNFIPAFKVNAVDTTAAGDTFIGALSSQLKPDMSNIEKAIVYAQRASSLAVQKLGALPS 293
Query: 364 MPDRKSVL 371
+P V+
Sbjct: 294 IPTYDEVV 301
>gi|320107461|ref|YP_004183051.1| ribokinase [Terriglobus saanensis SP1PR4]
gi|319925982|gb|ADV83057.1| ribokinase [Terriglobus saanensis SP1PR4]
Length = 306
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 166/316 (52%), Gaps = 27/316 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ + R+P GET+ ++ T GGKGANQA A+L +G+VGE
Sbjct: 5 IVVVGSINLDLVAFVPRMPVSGETITGQSFATYPGGKGANQAVGAARLGGNVVMIGRVGE 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + D LS GV + V P+G AVVM+ G NSI+++ G N S P
Sbjct: 65 DLFATQLLDELSSAGVSRHCVESVPG---PSGSAVVMVTPAGDNSIVVIPGANDSLQPAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D L+ ++ A ++L Q EIP ++A+ AR GVP + D AP +P LL
Sbjct: 122 L-DLYLDELRSASLILSQLEIPLPTVERLAELAREFGVPFMLDP----APARELPPTLLR 176
Query: 247 FIDILSPNESE----LGRLTGMPTDSYEQISEAVVKCHKM--GVQQVLVKLGAKGSALFV 300
+ L+PNESE L L G P AV H + GV+ V++K+G++G +F+
Sbjct: 177 NVTWLTPNESETQILLQGLRGNP-----NFEPAVAAQHLLDTGVRNVILKMGSRG--VFL 229
Query: 301 EGEKPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
GE ++ + +PA V+DTT AGD F FA G +G E RFA A A++ V
Sbjct: 230 AGEA-METTYLPAFPVEVVDTTAAGDAFNGGFAYGLSDGMEPIEAARFANAVAAVSVSKT 288
Query: 359 GAIPSMPDRKSVLNLL 374
GA PSMP V +L
Sbjct: 289 GAQPSMPKLADVNRML 304
>gi|293569449|ref|ZP_06680742.1| ribokinase [Enterococcus faecium E1071]
gi|294623448|ref|ZP_06702302.1| ribokinase [Enterococcus faecium U0317]
gi|430829815|ref|ZP_19447891.1| ribokinase [Enterococcus faecium E0269]
gi|430837570|ref|ZP_19455535.1| ribokinase [Enterococcus faecium E0680]
gi|431777769|ref|ZP_19566019.1| ribokinase [Enterococcus faecium E2560]
gi|431783474|ref|ZP_19571585.1| ribokinase [Enterococcus faecium E6012]
gi|291587843|gb|EFF19698.1| ribokinase [Enterococcus faecium E1071]
gi|291597143|gb|EFF28340.1| ribokinase [Enterococcus faecium U0317]
gi|430479563|gb|ELA56788.1| ribokinase [Enterococcus faecium E0269]
gi|430487223|gb|ELA63985.1| ribokinase [Enterococcus faecium E0680]
gi|430638837|gb|ELB74737.1| ribokinase [Enterococcus faecium E2560]
gi|430645144|gb|ELB80685.1| ribokinase [Enterococcus faecium E6012]
Length = 308
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ VE + P+ ETV A + L GGKG+NQA AK F+G VG+
Sbjct: 5 VVVLGSINMDVRVETNNYPEYSETVFANKIEMLPGGKGSNQAVSVAKQGKKLAFLGAVGQ 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + L G+ Y +++ TG V ++ + G+N+++ G N + E
Sbjct: 65 DSAGKQMLQNLENKGILTSY--ILQTNKAGTGTFVAIVDNSGENTMVGTMGANETLLKED 122
Query: 190 FGD--EDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ D+E A ++LLQ E I+ K A+ + I D D +E L +
Sbjct: 123 IREVFSDIE----AKVLLLQMETSRESIIETMKIAKEKNMYTILDPAPADGYF-EEALKY 177
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+++PN+ E ++TG+ E EA K H MGV V++K+G KGS ++ GEK +
Sbjct: 178 ASLVTPNQQETEKITGIKVVDEETAFEAAKKIHAMGVPDVIIKMGNKGSLVYKNGEKVLV 237
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
SI + +DT GAGDTF + A V+ + E +RFA AA + V G ++P +
Sbjct: 238 DSI--KVKAVDTVGAGDTFAGALAATLVDTDNLVEAVRFANIAAGIKVSRFGGQEAIPTK 295
Query: 368 KSVL 371
+ V+
Sbjct: 296 EEVM 299
>gi|340355525|ref|ZP_08678208.1| ribokinase [Sporosarcina newyorkensis 2681]
gi|339622297|gb|EGQ26821.1| ribokinase [Sporosarcina newyorkensis 2681]
Length = 295
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 163/306 (53%), Gaps = 28/306 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GSAN D+ V D P GETV T+ GGKGANQA A+L + V VG+
Sbjct: 2 ITVIGSANMDLVVGTDNFPAQGETVLGDIFDTVPGGKGANQAVAAARLGSRVHMVCCVGD 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I L V + VV DG +G A ++L S+G N II+V G N P
Sbjct: 62 DMFGKSIVSNLQKNEVDCTGVGVV-DGA--SGIANILL-SEGDNRIIVVPGANSLLTPAH 117
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD---AGGMDAPIPQELLN 246
D E++KK+ IV+LQ EIP + + R GVPV+ + AGG +A E+L
Sbjct: 118 IDAMD-EIIKKSKIVMLQLEIPVPTVMYALEKCREFGVPVLMNPAPAGGFNA----EMLP 172
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
FI L+PNE+E +L G +V +M +++V LG++G+ F +G++ +
Sbjct: 173 FITYLTPNETECEQLFGGD----------MVDALEMHPNRLIVTLGSEGARYF-DGQRHV 221
Query: 307 KQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I+ + +DTTGAGDTF + A G VEG E +RFA AAASL V+ GA M
Sbjct: 222 ---IVEGFKTKAVDTTGAGDTFNGALAHGIVEGMDLERAVRFANAAASLSVEKFGAQGGM 278
Query: 365 PDRKSV 370
P + V
Sbjct: 279 PASEEV 284
>gi|292897753|ref|YP_003537122.1| ribokinase [Erwinia amylovora ATCC 49946]
gi|291197601|emb|CBJ44694.1| ribokinase [Erwinia amylovora ATCC 49946]
Length = 309
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 163/311 (52%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + P+ GETV K Q GGKGANQA A+ F+ VGE
Sbjct: 7 LTVLGSINADHILNLAHFPRPGETVIGKQYQVAFGGKGANQAVAAARSGADMAFIACVGE 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I L+ R+D +V G TG A++ + DG+N+I I G N + P++
Sbjct: 67 DDIGERIRLQLAND--RIDIASVAVISGGSTGVALIFVDGDGENTIGIYAGANAALTPQR 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---ELLN 246
+ L + +A I+L+Q E P + A+ A V+ + AP Q ELL
Sbjct: 125 VVEHQL-TIAEAQILLMQLESPLDSVLAAARIAHQHQTRVVLNP----APAMQLSDELLA 179
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E LTG+ +S E + A K H+ G+ VL+ LG++G L +G
Sbjct: 180 LVDIITPNETEAQILTGVAVNSDEDAARAAQKLHEKGITTVLITLGSRGVWLSEQG---- 235
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K +PA V +DT AGDTF + +E + E +RFA AAA++ V +GA PS+
Sbjct: 236 KGHCVPAFSVAAVDTVAAGDTFNGALMTALLEQRPMTESVRFAHAAAAIAVTRRGAQPSV 295
Query: 365 PDRKSVLNLLQ 375
P R + + LQ
Sbjct: 296 PWRDEIDSFLQ 306
>gi|319648006|ref|ZP_08002223.1| RbsK protein [Bacillus sp. BT1B_CT2]
gi|423684141|ref|ZP_17658980.1| ribokinase [Bacillus licheniformis WX-02]
gi|317389641|gb|EFV70451.1| RbsK protein [Bacillus sp. BT1B_CT2]
gi|383440915|gb|EID48690.1| ribokinase [Bacillus licheniformis WX-02]
Length = 293
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 157/304 (51%), Gaps = 22/304 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + P GETV ++ +T+ GGKGANQA A+L + +G VG+
Sbjct: 4 ICVIGSSSMDLVVTSPKRPAAGETVLGESFKTVPGGKGANQAVAAARLGAEVHMIGCVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I D GV DY+ V T H V+ +DG NSII+V G N PE
Sbjct: 64 DHYGKAILDNFQANGVLTDYVEPVTGQESGTAHIVL---ADGDNSIIVVKGANDHVTPE- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + L +K+A I+L+Q+EIP+ V+ S G+P++ + P+ E +
Sbjct: 120 YVQKALPAIKQADIILIQQEIPEETVDYVSGLCSSLGIPLLLNPAPAR-PLRPETVEHAA 178
Query: 250 ILSPNESELGRL-TGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE E L GM + + K +++ + G G V +++
Sbjct: 179 YITPNEHEASVLFQGMSRE----------ETLKRYPEKLFITEGKNG----VRYHNGLEE 224
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++P+ V IDTTGAGDTF A FAV EG+S E LRFA AASL V GA MP
Sbjct: 225 RVVPSFPVNAIDTTGAGDTFNAGFAVALSEGQSIESALRFANRAASLSVLKFGAQGGMPK 284
Query: 367 RKSV 370
R V
Sbjct: 285 RDEV 288
>gi|404372097|ref|ZP_10977397.1| ribokinase [Clostridium sp. 7_2_43FAA]
gi|226911768|gb|EEH96969.1| ribokinase [Clostridium sp. 7_2_43FAA]
Length = 309
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 172/308 (55%), Gaps = 20/308 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ +++ +P+VGET+ +K+ + ++GGKGANQA + + ++G+D
Sbjct: 6 VLGSMNMDLVLKVKDIPQVGETILSKSFEKISGGKGANQAVAAKRSGSEVTMISKIGKDD 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG ++ + L + + + + +D TG A++M+ +G NSII+V G+NM+ +
Sbjct: 66 NGLILKNKLKEDNIDVSF--IYEDEKEATGMAIIMVNENGNNSIIVVPGSNMTINEGEI- 122
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
D+ + +K++ I++ Q E P+ + ++ K A+ G I + AP I +ELL
Sbjct: 123 DKSEKALKESDILISQFETPEEITLKAFKKAKEFGKVTILNP----APAKKIDEELLKVT 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E LTG+ ++ E +A GV+ V++ LG++G+A+ E
Sbjct: 179 DIIVPNETEAEVLTGIKVENLEDAKKAAEVFLNKGVKFVIITLGSRGAAVIGED----FS 234
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLR---FAAAAASLCVQVKGAIP 362
++PA +V IDTT AGD+F + V+ ++E ++ F +S+ VQ KGA P
Sbjct: 235 EVVPAFKVNAIDTTAAGDSFIGGLSSKLDVKSLNKENLIKAVTFGNKVSSIAVQRKGAQP 294
Query: 363 SMPDRKSV 370
S+P K V
Sbjct: 295 SIPYLKEV 302
>gi|354582504|ref|ZP_09001406.1| ribokinase [Paenibacillus lactis 154]
gi|353199903|gb|EHB65365.1| ribokinase [Paenibacillus lactis 154]
Length = 294
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 162/303 (53%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GSA+ D+ V + P+ GETV + +T+ GGKGANQA A+L +G+VG+
Sbjct: 4 ITVIGSASMDLVVTSAKRPRAGETVLGDSFKTVPGGKGANQAVAAARLGAEVTMIGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G++I + L G+ DY+ V D T H ++ ++G NSI+ V N P+
Sbjct: 64 DSFGQVILNNLKANGIVADYVEPVTDMESGTAHIIL---AEGDNSIVFVKAANDLVTPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D EV++ + IVL+Q+EIP+ + V+ GVP+I + P+PQ ++
Sbjct: 120 YVDRAAEVIQGSDIVLIQQEIPEETVVHVSDLCAKYGVPLILNPAPA-RPVPQSVIEKAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE E L G E + + + +++V G KG + +G + +
Sbjct: 179 YITPNEHEALVLFG---------EEPLGEVLRRYPNKLIVTEGKKG-VRYYDGSQEV--- 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++P +V +DTTGAGDTF +FAV EG S + L FA AA+L V GA MP R
Sbjct: 226 VVPGYKVEAVDTTGAGDTFNGAFAVALAEGMSLSDSLDFANRAAALSVTKFGAQGGMPTR 285
Query: 368 KSV 370
+ V
Sbjct: 286 REV 288
>gi|440233115|ref|YP_007346908.1| ribokinase [Serratia marcescens FGI94]
gi|440054820|gb|AGB84723.1| ribokinase [Serratia marcescens FGI94]
Length = 308
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV K + GGKGANQA + F+ VG
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVIGKQYKVAFGGKGANQAVAAGRSGADIAFIACVGA 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L+ R+D ++ TG A++ + +G+N I I G N + P
Sbjct: 66 DDVGERVRRQLATD--RVDTQSIEAIENCTTGVALIFVNGEGENVIGIDAGANAALTPAY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ V A +L+Q E P I A+ A+ VI + AP +P ELL
Sbjct: 124 LARYQ-QRVSDADALLMQLESPLETVIAAARLAKQHQTRVILNP----APARELPDELLA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ DS + + A H+ G++ VL+ LG++G L GE
Sbjct: 179 MLDMITPNETEAERLTGIAVDSEQDAARAAQALHQKGIETVLITLGSRGVWLSERGEG-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++PA +V +DT AGDTF + +EGK+ ++ + F AAA++ V GA PS+
Sbjct: 237 --KLVPAFKVEAVDTIAAGDTFNGALLTALLEGKAMQDAVCFGHAAAAIAVTRPGAQPSV 294
Query: 365 PDRKSVLNLLQ 375
P R+ + LQ
Sbjct: 295 PWREEIDAFLQ 305
>gi|418327731|ref|ZP_12938871.1| ribokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232688|gb|EHM73676.1| ribokinase [Staphylococcus epidermidis 14.1.R1.SE]
Length = 307
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 160/312 (51%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQT-LAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ ++G
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKIG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKRAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ +A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSAEAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + + +G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKDTATYFLDLGISAVLITLGEQGT--YCA 232
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
++ K +IPA V +DTT AGDTF +F + S E +R A A+SL VQ K
Sbjct: 233 YQEQYK--MIPACNVKAVDTTAAGDTFIGAFLSELNKDLSNLESAIRLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|293368746|ref|ZP_06615351.1| ribokinase [Bacteroides ovatus SD CMC 3f]
gi|292636211|gb|EFF54698.1| ribokinase [Bacteroides ovatus SD CMC 3f]
Length = 304
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 10/310 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
++T +VV+GS+N D+ ++ DRLPK GET+ GGKGANQA A+L F
Sbjct: 1 MDTKKKIVVIGSSNTDMVIKSDRLPKPGETILGGNFLMNHGGKGANQAVAAARLGGDVTF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ ++G D G + G+ Y+ + P+G A++ + G+N I++ G N
Sbjct: 61 ICKIGNDIFGNETLEMFHKEGIDTTYVGITPQA--PSGVALINVDKKGENCIVVASGANG 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQ 242
+ + + +K+A IV++Q E P AK A+ G+ VI + A +P
Sbjct: 119 TLSVDDIQRAE-STIKQASIVIMQLETPIESVTYAAKMAKKDGITVILNPAPAPTQQLPD 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
+LL +DIL PN +E ++GM E EA+ G++ V++ +GAKG AL E
Sbjct: 178 DLLANVDILIPNVTEAEIISGMHITDDESAKEAIRYISSKGIKTVIITMGAKG-ALAYEN 236
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
K IPA +V +DTT AGDTF V EGK+ ++ + FA+ A+S+ V GA
Sbjct: 237 NKFTH---IPAFKVEAVDTTAAGDTFCGGLCVALSEGKNLKDAIIFASKASSISVTRMGA 293
Query: 361 IPSMPDRKSV 370
S+P RK +
Sbjct: 294 QVSIPLRKEI 303
>gi|365966513|ref|YP_004948075.1| ribokinase [Aggregatibacter actinomycetemcomitans ANH9381]
gi|416089233|ref|ZP_11587888.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|348009421|gb|EGY49573.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype b str.
I23C]
gi|365745426|gb|AEW76331.1| ribokinase [Aggregatibacter actinomycetemcomitans ANH9381]
Length = 310
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 164/309 (53%), Gaps = 9/309 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L P F+
Sbjct: 5 LVVLGSVNADHMIRVPRFARAGETLRGSGYRIAYGGKGANQAVAAARLKDPNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G+ + A + G+ + V+ TG A++ + +G+NSI+I G N +C
Sbjct: 65 LGNDDIGRTMKAAFAKDGINTATITQVEQE--MTGVAMIQVADNGENSIVINAGAN-ACL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S + A+ A+ G VI + A +P+ELL
Sbjct: 122 DEHLVSCYASHIQQADALLMQLETPLSAICKAAQIAKQNGTKVILNPAPAQA-LPEELLR 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LT + + ++A + H++GVQ VL+ LGAKG G+ I
Sbjct: 181 QLYMITPNETEAEILTDIKVEDKISAAQAAKRFHQLGVQIVLITLGAKGVYFSENGQGQI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
A+ DTT AGDTF + AV +EGK+ +RFA AAA++ V +GA PS+P
Sbjct: 241 IGGFRVKAK--DTTAAGDTFNGALAVALLEGKTLTNAIRFAHAAAAISVTREGAQPSIPS 298
Query: 367 RKSVLNLLQ 375
R L+ L+
Sbjct: 299 RAEALDFLE 307
>gi|189464877|ref|ZP_03013662.1| hypothetical protein BACINT_01221 [Bacteroides intestinalis DSM
17393]
gi|189437151|gb|EDV06136.1| ribokinase [Bacteroides intestinalis DSM 17393]
Length = 302
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 157/301 (52%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ ++ DRLP GET+ + GGKGANQA A+L +F+ + G
Sbjct: 5 IIVIGSCNTDMVIKADRLPVPGETIIGGSFMMNPGGKGANQAVAAARLKGNVHFIAKTGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + G+ ++ N+ D +P+G A++M+ +G+NSI I G N S PE
Sbjct: 65 DLFGKRSIEQYEDEGIHVE--NIYSDPTLPSGVALIMVDMNGENSIAIASGANGSLSPED 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++K I+L+Q EIP A+ A G+ VI + A + +LL +
Sbjct: 123 IRKAQ-PTIEKGDILLMQLEIPIETVEYAAQIASEQGIKVILNPAPARA-LSNKLLQNLY 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E L+G+ +E +A GV V++ LG+KG+ ++ + +
Sbjct: 181 MIIPNETEAEILSGVKVTDWESARKAADIISAKGVDIVVITLGSKGA--LIKEKDTFHEV 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+P + +DTT AGDTF + V E + + ++FA AS+ V GA PS+P RK
Sbjct: 239 PVPKVKAVDTTAAGDTFCGALCVALSEDVNVLDAVKFANKCASITVTRMGAQPSLPYRKE 298
Query: 370 V 370
+
Sbjct: 299 I 299
>gi|421262865|ref|ZP_15713950.1| ribokinase [Pasteurella multocida subsp. multocida str. P52VAC]
gi|401690278|gb|EJS85559.1| ribokinase [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 306
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 160/311 (51%), Gaps = 15/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + + GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAQPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGANAYLTETV 121
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F D+ + +A +L+Q E P S I AK A+SA V+ + P+P ELL
Sbjct: 122 VEQFADK----ITQADTLLMQLETPLSAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLT 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ ++A H+ G++ VL+ LG+KG +K
Sbjct: 177 QLDMITPNETETEILTGVKVVDEHSAAQAAALFHQKGIETVLITLGSKG---VYASQKGA 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++ RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+
Sbjct: 234 PGKMVAGFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSI 293
Query: 365 PDRKSVLNLLQ 375
P R+ LN LQ
Sbjct: 294 PTRQETLNFLQ 304
>gi|427384807|ref|ZP_18881312.1| ribokinase [Bacteroides oleiciplenus YIT 12058]
gi|425728068|gb|EKU90927.1| ribokinase [Bacteroides oleiciplenus YIT 12058]
Length = 302
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ ++ DRLP GETV + GGKGANQA A+L YF+ + G
Sbjct: 5 IIVIGSCNTDMVIKADRLPVPGETVMGGSFMMNPGGKGANQAVAAARLKGNVYFIAKTGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + G+ ++ N+ D +P+G A++M+ +G+NSI + G N S PE
Sbjct: 65 DLFGKRSIEQYEDEGIHVE--NIYSDPTLPSGVALIMVDVNGENSIAVASGANGSLSPED 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
V++K I+L+Q EIP A+ A G+ VI + A + +LL +
Sbjct: 123 IRKAQ-PVIEKGDILLMQLEIPIETVEYAAQIASEQGIKVILNPAPARA-LSNKLLQNLY 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E L+G+ +E +A GV V++ +G+KG+ ++ +
Sbjct: 181 MIIPNETEAEILSGIKVTDWESARKAADIISAKGVDIVVITMGSKGA--LIKENNAYHEV 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+P + +DTT AGDTF S V E + + ++FA AS+ V GA ++P RK
Sbjct: 239 SVPKVKAVDTTAAGDTFCGSLCVALSEDMNVLDAVKFANKCASITVTRMGAQSALPYRKE 298
Query: 370 V 370
+
Sbjct: 299 I 299
>gi|403252700|ref|ZP_10919008.1| ribokinase [Thermotoga sp. EMP]
gi|402811906|gb|EJX26387.1| ribokinase [Thermotoga sp. EMP]
Length = 341
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 158/308 (51%), Gaps = 21/308 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVGED 130
VVGS+N DI +++D K GET A GGKGANQA AK+ FV +G D
Sbjct: 4 VVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGND 63
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
L+ + G+ Y+ V +PTG A + + GQN III G N E
Sbjct: 64 DYSDLLIENYEKLGIT-GYIRV----SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELI 118
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNF 247
D + ++ I+LLQ EIP ++ AK R G+ VIFD AP I +E+ +
Sbjct: 119 ---DWNTLSESDILLLQNEIPFETTLECAK--RFNGI-VIFDP----APAQGINEEIFQY 168
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+D L+PNE E+ L+ + + +A K ++GV+ V+VKLG KG L + EK K
Sbjct: 169 LDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEK--K 226
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ +DTT AGD F +FAV EGK+ EE + F AAA++ V GA S+P R
Sbjct: 227 HFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAR 286
Query: 368 KSVLNLLQ 375
+ V L+
Sbjct: 287 EEVEAFLK 294
>gi|227543892|ref|ZP_03973941.1| ribokinase [Lactobacillus reuteri CF48-3A]
gi|338202656|ref|YP_004648801.1| ribokinase [Lactobacillus reuteri SD2112]
gi|227186153|gb|EEI66224.1| ribokinase [Lactobacillus reuteri CF48-3A]
gi|336447896|gb|AEI56511.1| ribokinase [Lactobacillus reuteri SD2112]
Length = 307
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 161/309 (52%), Gaps = 19/309 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D +++ R+P GET+AA + AGGKGANQA A+ T FVGQVG+
Sbjct: 5 VTIVGSLNVDTTMKVKRMPLPGETIAALSKTNAAGGKGANQAVAAARSGAETAFVGQVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK++ + L V D + D TG A ++L GQNSI++ GG N +
Sbjct: 65 DAGGKMMINDLKNNNV--DTTGIHVDDQAGTGSAAILLDESGQNSILVYGGANQQLSVK- 121
Query: 190 FGDEDL-EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
G ED + + V+ Q E P ++ + A+ GV I + AP I +LL
Sbjct: 122 -GVEDARDQIAATDFVIAQFETPQEATLRAFQIAKENGVKTILNP----APAHEINPDLL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D++ PNE+E LTG+ + + K +MGV+ +++ +GAKG+ +
Sbjct: 177 KLTDLIIPNETESAALTGIIVTDETSMLMSAAKFAQMGVRNLIITVGAKGAFYCTQD--- 233
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIP 362
+ IPA +V +DTT AGDTF + + S E+ + +A A+SL VQ GA+P
Sbjct: 234 -GYNFIPAFKVNAVDTTAAGDTFIGALSSQLKPDMSNIEKAIVYAQRASSLAVQKLGALP 292
Query: 363 SMPDRKSVL 371
S+P V+
Sbjct: 293 SIPTYDEVV 301
>gi|408789546|ref|ZP_11201202.1| Ribokinase [Lactobacillus florum 2F]
gi|408521229|gb|EKK21207.1| Ribokinase [Lactobacillus florum 2F]
Length = 541
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 164/314 (52%), Gaps = 24/314 (7%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKT-SQTLAGGKGANQAACGAKLSHPTYFVG 125
P +VVVGS N D + +++ GET+A + Q+ GGKGANQA A+ T F+
Sbjct: 3 PKKIVVVGSTNVDKVLNVEKYALPGETLAIDSYQQSHGGGKGANQAIAAARSGADTTFIT 62
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNV---VKDGGVPTGHAVVMLQSDGQNSIIIVGGTN 182
++G D + +++ G + D+MNV + TG A + + GQNSI + GG N
Sbjct: 63 KLGRDEDAEMMLK-----GFQQDHMNVDHVIMTDQSQTGKAYITVDQSGQNSIYVYGGAN 117
Query: 183 MSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP--- 239
M+ P+ E + KA V+ Q EIP I K A+ GV I + AP
Sbjct: 118 MALSPDDVIAH-REALAKADRVIAQLEIPIPAIIAAFKIAKENGVQTILNP----APAKE 172
Query: 240 IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF 299
IP+ELL+ DI++PNE+E LTG+ + + +K G++ V++ +G KGS
Sbjct: 173 IPEELLHLTDIITPNETEAQTLTGLEVKDEVSMLDNALKFFAQGIKMVIITVGDKGSFY- 231
Query: 300 VEGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQ 356
P + IPA +V +DTT AGDTF + A ++ + E + +A A+SL VQ
Sbjct: 232 ---ATPESHAFIPAFKVKAVDTTAAGDTFIGALASQLELDNSNIREAMLYANHASSLTVQ 288
Query: 357 VKGAIPSMPDRKSV 370
V GA S+PD+ ++
Sbjct: 289 VAGAQNSIPDQAAI 302
>gi|172036776|ref|YP_001803277.1| ribokinase [Cyanothece sp. ATCC 51142]
gi|171698230|gb|ACB51211.1| ribokinase [Cyanothece sp. ATCC 51142]
Length = 318
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 163/310 (52%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ + R P+ GET+ TL GGKGANQA AKL TYFVG+VG
Sbjct: 12 IVVFGSINMDMIAQTPRFPQPGETITGTHFITLPGGKGANQAVATAKLGRSTYFVGRVGG 71
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + L + + V+ D +G A++ +++ G+NSII++ G N +
Sbjct: 72 DSLGRDLLKKLETFDI--NTQGVLIDKNTSSGVAMITVETSGENSIIVIPGANGNI---- 125
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+ +++ K ++LLQ EIP A A+ GV V+ D IP L
Sbjct: 126 -NESDVIRLEKILLKTSLLLLQLEIPLKAVEIAALEAKKLGVTVMLDPAPAPEKIPDSLY 184
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PN++E +L G P E I +A + + GV+ V++KLG KG+ E E+
Sbjct: 185 PLIDIITPNQTEAAKLVGFPVSDTETIKKAAEELLQKGVKIVIIKLGQKGAFYATENEEG 244
Query: 306 IKQSIIPAA-RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ P A + IDT GAGD F A G S +E L++ A +L +GA ++
Sbjct: 245 F---VAPTAVKAIDTVGAGDGFNGGVAAALDRGLSLKEALKWGAIVGALTTTEEGAQTAL 301
Query: 365 PDRKSVLNLL 374
PD ++V L+
Sbjct: 302 PDLETVEQLI 311
>gi|425064916|ref|ZP_18468036.1| Ribokinase [Pasteurella multocida subsp. gallicida P1059]
gi|404384631|gb|EJZ81064.1| Ribokinase [Pasteurella multocida subsp. gallicida P1059]
Length = 306
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 159/308 (51%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAKPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N + E
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGAN-AYLTET 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ + +A +L+Q E P S I AK A+SA V+ + P+P ELL +D
Sbjct: 121 VVEQFANKITQADTLLMQLETPLSAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLTQLD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ ++A H+ G++ VL+ LG+KG +K
Sbjct: 180 MITPNETETEILTGVKVVDEHSAAQAAALFHQKGIETVLITLGSKG---VYASQKGTPGK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++ RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+P R
Sbjct: 237 MVAGFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSIPTR 296
Query: 368 KSVLNLLQ 375
+ LN LQ
Sbjct: 297 QETLNFLQ 304
>gi|331270091|ref|YP_004396583.1| ribokinase [Clostridium botulinum BKT015925]
gi|329126641|gb|AEB76586.1| ribokinase [Clostridium botulinum BKT015925]
Length = 299
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 165/297 (55%), Gaps = 20/297 (6%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ ++++R+ KVGET+ A + + GGKG+NQA ++++ +G+VG D NG ++
Sbjct: 1 MDVVLKVNRMAKVGETIFANDLKNIPGGKGSNQAIACSRMNANVSMIGKVGMDGNGDILV 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L + +Y + KD V TG A++ + ++ NSII+ G+NM+ E+ +E V
Sbjct: 61 NKLKENNINTEY--IFKDDKVSTGTAIITVDNEANNSIIVASGSNMTIEEEEI-NEASNV 117
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFIDILSPN 254
+K + IV+ Q E+P ++ K A+ I + AP I +ELL + DI+ PN
Sbjct: 118 IKNSDIVISQFEVPMKTILKGFKIAKENNKITILNP----APAKKIDRELLKYTDIIIPN 173
Query: 255 ESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAA 314
E+E LTG+ + A K G++ V++ LG++G+A+ ++ I+PA
Sbjct: 174 ETEAFELTGLEVTDLDSAKNAANILMKEGIKCVIITLGSRGAAVIMKE----YSDIVPAF 229
Query: 315 RV--IDTTGAGDTFTASFA----VGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+V IDTT AGD+F FA + + ++ ++ ++F +S+ VQ +GA PS+P
Sbjct: 230 KVNAIDTTAAGDSFIGGFASKIDINNMSFENLKKSIKFGNMVSSIAVQREGAEPSIP 286
>gi|115351560|ref|YP_773399.1| ribokinase [Burkholderia ambifaria AMMD]
gi|115281548|gb|ABI87065.1| ribokinase [Burkholderia ambifaria AMMD]
Length = 308
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 137/296 (46%), Gaps = 4/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGAQVTMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D + TG A++++ QN+I+IV G N PE
Sbjct: 71 DAHGAALRAGLEAEGI--DCARLATSAAASTGVALIVVDDASQNTIVIVAGGNGEVTPET 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 VARHE-AALAATDVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P A G + VL+ LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTGLPVRDPADAEAAARMLQAGGARNVLITLGARG-VLALSADGAARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + IDTT AGDTF FA G+ + +RFA AA+L V GA PS+P
Sbjct: 247 PAPVVQAIDTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPSIP 302
>gi|256847656|ref|ZP_05553101.1| ribokinase [Lactobacillus coleohominis 101-4-CHN]
gi|256715345|gb|EEU30321.1| ribokinase [Lactobacillus coleohominis 101-4-CHN]
Length = 309
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 158/307 (51%), Gaps = 17/307 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D +DR P+ GET+ AK + GGKGANQ+ A+ TY +G VG
Sbjct: 5 IAVLGSINVDTTYHMDRFPQPGETLQAKDKSSAPGGKGANQSVACARSGAKTYHIGMVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + +++ G+ ++ + K G TG A++ L ++GQN I++ GG N + +
Sbjct: 65 DQEGQFMRESMQEDGIDTKFVGIDKMHG--TGTAMITLDAEGQNDIMVYGGANQAMTTDV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ D ++ K+ ++ Q E P V+ + K A+ GV I + AP I ELL
Sbjct: 123 LKNTD-DLFKEIDFIITQFETPQKVSAEAFKRAKENGVTTILNP----APAKDIDPELLK 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ D+++PNE+E LTG+ + + + GV +L+ LG+KG V P
Sbjct: 178 YTDVIAPNETESALLTGIEITDEDSMIKTAEYFKAKGVPNLLITLGSKG----VFYSTPN 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
++PA +V +DTT AGDTF + S + L +A A+SL VQ GA PS
Sbjct: 234 DHGLVPAFKVKPVDTTAAGDTFIGALTSQLKTDLSNIADALVYAQRASSLTVQKMGAAPS 293
Query: 364 MPDRKSV 370
+P V
Sbjct: 294 IPTYDEV 300
>gi|15602017|ref|NP_245089.1| ribokinase [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720370|gb|AAK02236.1| RbsK [Pasteurella multocida subsp. multocida str. Pm70]
Length = 306
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 159/311 (51%), Gaps = 15/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+ +G+
Sbjct: 4 LTVLGSVNADHVISVPHFAKPGETLTGNHYHIAYGGKGANQAVAAARLGANIDFIACIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + A G+ + VV+ TG A++ + + G+NSI+I G N
Sbjct: 64 DAIGQAMKKAFQQDGI--NTQAVVEIADQMTGIAMIQVNAHGENSIVIAAGANAYLTETV 121
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F D+ + +A +L+Q E P I AK A+SA V+ + P+P ELL
Sbjct: 122 VEQFADK----ITQADTLLMQLETPLRAVIFAAKLAKSANTKVVLNPAPAQ-PLPDELLT 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ ++A H+ G++ VL+ LG+KG +K
Sbjct: 177 QLDMITPNETETEILTGVKVVDEHSAAQAAALFHQKGIETVLITLGSKG---VYASQKGT 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++ RV DTT AGDTF + +E K + +RFA AAA++ V GA PS+
Sbjct: 234 PGKMVAGFRVDAKDTTAAGDTFNGALMTALLEDKPLADAIRFAHAAAAISVTRAGAQPSI 293
Query: 365 PDRKSVLNLLQ 375
P R+ LN LQ
Sbjct: 294 PTRQETLNFLQ 304
>gi|251779251|ref|ZP_04822171.1| ribokinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083566|gb|EES49456.1| ribokinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 306
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+PK GET+ A GGKGANQA +KL V +VG+
Sbjct: 3 IAVIGSNMVDLITYIDRMPKEGETLEAPNFNMGCGGKGANQAVAASKLKSDVMMVSKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK G+ D++ + K+ +G A + + + +NSI+IV G N S P+
Sbjct: 63 DLFGKNTIKNFKDNGINTDFVTIEKNQA--SGVAPIFVDKNSKNSILIVKGANKSLSPKD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL-LNFI 248
DE E +KK +++LQ EI A +PV+ + AP +L LN++
Sbjct: 121 I-DEASEELKKCSLIVLQLEINLETVYYAIDFANKNNIPVLLNP----APAISDLNLNYV 175
Query: 249 ---DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG-------SAL 298
D L+PNESEL LT P + E+I EA H GV+ V+V +G+KG
Sbjct: 176 CKCDFLAPNESELEILTNKPVSTVEEIKEAARYIHDKGVKNVIVTMGSKGVLCINNNDEY 235
Query: 299 FVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
F+E K IDTTGAGD+F FA +V K L+ A A A+L V
Sbjct: 236 FIEAHK---------VNAIDTTGAGDSFIGCFAHFYVTTKDILLSLKRATAFAALSVTRY 286
Query: 359 GAIPSMPDRK 368
G S P ++
Sbjct: 287 GTQSSYPTKE 296
>gi|386012747|ref|YP_005931024.1| Ribokinase [Pseudomonas putida BIRD-1]
gi|313499453|gb|ADR60819.1| Ribokinase [Pseudomonas putida BIRD-1]
Length = 302
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 156/297 (52%), Gaps = 7/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLP+ GET+ + T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVVRAQRLPRAGETLPGDSFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V G +G A++ + + QN I+I+ G N P+
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVSTCPGTSSGVALITVDAASQNCIVIIPGANGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D +++ A +V+ Q E+P ++V +A+ AR G VI + P+P + I
Sbjct: 123 VLHFD-ALLQAAEVVICQLEVPTETVACTLAR-ARELGKQVILNPAPATGPLPADWFAHI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L+PNESE LTG+ + A + ++G +V++ LGA+G AL V + +
Sbjct: 181 DYLTPNESEAEALTGVAVTDQDSARRAGERLLQLGAGKVIITLGAQG-ALLVTAQGH-QH 238
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 239 YPAPHVQPLDTTAAGDTFIGGFAAGLVRGLEEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|333899933|ref|YP_004473806.1| ribokinase [Pseudomonas fulva 12-X]
gi|333115198|gb|AEF21712.1| ribokinase [Pseudomonas fulva 12-X]
Length = 302
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 155/301 (51%), Gaps = 5/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLP+ GET+ T AGGKGANQA A+L +G VG
Sbjct: 5 VVVVGSLNMDLIVRAPRLPRGGETLTGHDFSTAAGGKGANQAVAAARLGAQVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + L G+ D V + GVPTG A +++ GQN+I+IV G N + P+
Sbjct: 65 DAYGARLRTGLITEGI--DCSAVSEIDGVPTGIASILVDDAGQNAIVIVAGGNGALTPQH 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ A ++++Q E+PD+ R AG VI + + P+ D
Sbjct: 123 LSAQA-QLLADAQVLIVQLEVPDATVEAAMMLGREAGCTVILNPAPVAGPLSAHWYGMAD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE LTG+P S + A + G ++VL+ LGA+G L+ + E+ +
Sbjct: 182 YLIPNESEAAALTGLPVGSPQSALPAARSLLQAGARRVLITLGAQG-VLYADAERHAHFA 240
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+ P A V DTT AGDTF FA G+ E + AA+L V GA PS+P R
Sbjct: 241 VAPVAAV-DTTAAGDTFVGGFAAALAAGQPLEAAIALGQQAAALAVTRPGAQPSIPYRHE 299
Query: 370 V 370
+
Sbjct: 300 L 300
>gi|339481081|ref|ZP_08656740.1| ribokinase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 308
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 28/307 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS D+ +DRLP GETV A + + GGKGANQA ++L + VG
Sbjct: 7 VLVIGSNVMDLISYVDRLPHKGETVEAPSFEMGFGGKGANQAVAASRLGAQVAMLTCVGN 66
Query: 130 DANGKLITDALSGCGVRLDYM-NVVKDGGVPTGH-----AVVMLQSDGQNSIIIVGGTNM 183
D G R +++ N + GV TGH A + ++S+G N I++V G N
Sbjct: 67 DN---------FGVETRANFVANHIDISGVLTGHQSNGVAPIFVESNGDNRILVVQGANT 117
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---I 240
PE D+ ++++K+A +++LQ+E+P NI+ A+ +P+I++ AP +
Sbjct: 118 ELTPEVLLDK-IDLIKRAKVIVLQQEVPMPTNIKAIHLAKKYNIPIIYNP----APAHKL 172
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
P ++L +D L PNESEL +T MP + ++ A + GV V+V +G +G+
Sbjct: 173 PLDVLPAVDYLIPNESELTAITKMPVSTVQETKAAARRLLSFGVANVIVTMGDRGALWIT 232
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
G++ +++ V IDTTGAGD F +FA F G+S E + A A A+L V +
Sbjct: 233 AGQEA---TLVDGQDVNAIDTTGAGDAFVGAFAHYFARGESLETAIIQANAYAALSVMTR 289
Query: 359 GAIPSMP 365
G S P
Sbjct: 290 GTQKSYP 296
>gi|261868762|ref|YP_003256684.1| ribokinase [Aggregatibacter actinomycetemcomitans D11S-1]
gi|415770020|ref|ZP_11484635.1| ribokinase [Aggregatibacter actinomycetemcomitans D17P-2]
gi|416076321|ref|ZP_11585402.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|416106876|ref|ZP_11590125.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|444344464|ref|ZP_21152725.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|444346074|ref|ZP_21154049.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|261414094|gb|ACX83465.1| ribokinase [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348004925|gb|EGY45415.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|348006078|gb|EGY46544.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348657053|gb|EGY74650.1| ribokinase [Aggregatibacter actinomycetemcomitans D17P-2]
gi|443542076|gb|ELT52449.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|443544080|gb|ELT54147.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 310
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 164/309 (53%), Gaps = 9/309 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L P F+
Sbjct: 5 LVVLGSVNADHMIRVPRFARAGETLRGSGYRIAYGGKGANQAVAAARLKDPNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G+ + A + G+ + V+ TG A++ + +G+NSI+I G N +C
Sbjct: 65 LGNDDIGRTMKAAFAKDGINTATITQVEQE--MTGVAMIQVADNGENSIVINAGAN-ACL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S + A+ A+ G VI + A +P+ELL
Sbjct: 122 DEHLVSCYAAHIQQADALLMQLETPLSAICKAAQIAKQNGTKVILNPAPAQA-LPEELLR 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LT + + ++A + H++GVQ VL+ LGAKG G+ I
Sbjct: 181 QLYMITPNETEAEILTDIKVEDKISAAQAAKRFHQLGVQIVLITLGAKGVYFSENGQGQI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
A+ DTT AGDTF + AV +EGK+ +RFA AAA++ V +GA PS+P
Sbjct: 241 IGGFRVKAK--DTTAAGDTFNGALAVALLEGKTLTNAIRFAHAAAAISVTREGAQPSIPS 298
Query: 367 RKSVLNLLQ 375
R L+ L+
Sbjct: 299 RAEALDFLE 307
>gi|423201611|ref|ZP_17188190.1| ribokinase [Aeromonas veronii AER39]
gi|404616643|gb|EKB13596.1| ribokinase [Aeromonas veronii AER39]
Length = 310
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 160/307 (52%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L P F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAPVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMKSGFAKDGI--DVSAVELDPKLPTGIAIIYVSDEGENSIGISAEANGAITPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ A +LLQ E+P + A+ AR+ G V+ + P+ ELL +D
Sbjct: 122 VKNHE-AMIADAHTLLLQLEVPLESVHEAARLARANGTRVVLNPAPAR-PLSSELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ EA + H+MG+ V++ LG++G V +Q
Sbjct: 180 LITPNQTEAELLTGVKVTDEASAREAAARFHQMGIADVMITLGSQG----VYCSNAQQQQ 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVKAVDTTAAGDTFNGALLAAELAGADFHSAVRFAHGAAALSVTRFGAQSSIPSK 295
Query: 368 KSVLNLL 374
+ V L
Sbjct: 296 QEVDTFL 302
>gi|420144196|ref|ZP_14651684.1| Ribokinase [Lactococcus garvieae IPLA 31405]
gi|391855648|gb|EIT66197.1| Ribokinase [Lactococcus garvieae IPLA 31405]
Length = 302
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 157/304 (51%), Gaps = 9/304 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ AK T GGKGANQA + T+F+G +G+
Sbjct: 4 ITIIGSINLDTTLRVSNMPKPGETLHAKEHFTAGGGKGANQAVAAKRSGADTFFIGAIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ + L + + +++ TG A + + G+NSI+I G N + PE
Sbjct: 64 DGAGQMMRELLEYEDIDTSAVQLLE--SQSTGQAFITVDDSGENSIMIFSGANNAFTPEH 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ + ++ Q E + K A+ V I + IPQELL D
Sbjct: 122 V-ENSKHIIENSDFLIAQFESALDSTVAAFKCAKENKVRTILNPAPARTDIPQELLATTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A H +G++ V++ LG+KG+ ++G K
Sbjct: 181 IIVPNETEAELITGIKVEDEHSLKAAADYFHNLGIEAVIITLGSKGAYYDIKGG---KSG 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S E+ + + + A+SL VQ GA PS+P
Sbjct: 238 IIPAFKVAAVDTTAAGDTFIGALSTVLKADFSNIEDAILYGSKASSLTVQRYGAQPSIPY 297
Query: 367 RKSV 370
+ +
Sbjct: 298 KNEL 301
>gi|296110426|ref|YP_003620807.1| ribokinase [Leuconostoc kimchii IMSNU 11154]
gi|339490421|ref|YP_004704926.1| ribokinase [Leuconostoc sp. C2]
gi|295831957|gb|ADG39838.1| ribokinase [Leuconostoc kimchii IMSNU 11154]
gi|338852093|gb|AEJ30303.1| ribokinase [Leuconostoc sp. C2]
Length = 309
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 164/307 (53%), Gaps = 17/307 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA A+ F+G VG
Sbjct: 11 IVVLGSLNADNIMKMPRMPLVGETMALTDVTTAPGGKGANQAVAAARQGANVSFIGAVGN 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG+ + L GV +D V +G VPTG A +MLQ G N+I+I GG N +
Sbjct: 71 DSNGQFMRATLLTNGVNVDA--VTTNGDVPTGSAYIMLQESGANTILIHGGANQAL---T 125
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D V+ A ++ Q E+P V I K A++ V I + + EL+ D
Sbjct: 126 IADIDESVIANADTLIAQFEVPLDVIIAAFKIAKANHVQTILNPAPAVYQLTSELMQVTD 185
Query: 250 ILSPNESELGRLTGMPTDSYE----QISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
I+ PNE+E L+G+ + E ++S A++ GV + ++ LGA GS +G+K
Sbjct: 186 IILPNETEAQLLSGITVKNDEAVLNRVSNAIL---SKGVSRCIITLGAAGS-FVADGDK- 240
Query: 306 IKQSIIP-AARVIDTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ P + +DTTGAGDTF + A V + + +E ++ A+ A+++ V GAIPS
Sbjct: 241 -RWWAKPNKVKALDTTGAGDTFIGTLARVIESDFSNLDEAVKQASIASAIAVTRAGAIPS 299
Query: 364 MPDRKSV 370
+P V
Sbjct: 300 IPTYDEV 306
>gi|453069761|ref|ZP_21973014.1| ribokinase [Rhodococcus qingshengii BKS 20-40]
gi|452762306|gb|EME20602.1| ribokinase [Rhodococcus qingshengii BKS 20-40]
Length = 293
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 158/307 (51%), Gaps = 26/307 (8%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VVVGS N D+ + R P GET+ T AGGKG+NQA AK FVG V
Sbjct: 4 PRIVVVGSINMDLTTSVSRFPAPGETLLGTAFATAAGGKGSNQAIAAAKAGGDVSFVGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D G + + L GV + V DG P+G A + + D +N+II+V G N S
Sbjct: 64 GDDGFGTQLRETLQDAGVDTALLRSV-DG--PSGVAAITVSEDAENNIIVVPGANSSV-- 118
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ DL+ + A ++L Q EIP A+ AR+ G VI + + +P L+
Sbjct: 119 TSLSEADLDAIAHADVLLCQLEIPLDTVTAAARHARANGTTVILNPSPVQ-DLPGALIES 177
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+DIL N++E EQ++ + V+ ++ LGA G+ L GE+ I
Sbjct: 178 VDILIVNQTE-----------SEQLAAVTGR-----VRYLVTTLGAGGADLR-SGEETIH 220
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
PA +DTTGAGD FT +FAV +V+G+ R L+FAA A S+ V+GA S P R
Sbjct: 221 AD-SPAVTPVDTTGAGDAFTGAFAVEWVQGQDR--ALQFAATAGSMATTVRGASVSSPTR 277
Query: 368 KSVLNLL 374
++ +L
Sbjct: 278 AAIEKVL 284
>gi|441503267|ref|ZP_20985274.1| Ribokinase [Photobacterium sp. AK15]
gi|441429483|gb|ELR66938.1| Ribokinase [Photobacterium sp. AK15]
Length = 306
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 163/307 (53%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + + GGKGANQA A+L F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVASFPRPGETLHGHSYCVIPGGKGANQAVAAARLGADVAFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + + + G+ + V+ + VPTG A++ + + G+NSI I N P++
Sbjct: 64 DSFGYQMREEFAKEGMNTEA--VLVEENVPTGIAMIQVAATGENSICISAEANACLTPKR 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ A +L+Q E P AK A+ AG V+ + P+ +LL ID
Sbjct: 122 L-EPHHHLLANADTLLMQLETPIETIEAAAKVAQEAGTRVVLNPAPAQ-PLSDDLLQLID 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + +A H G++QV++ LG++G + EG K
Sbjct: 180 MITPNETEAELLTGVKVEDTASAQKAADVLHAKGIKQVMITLGSQGVWISNEG----KGQ 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+P RV DTT AGDTF + G EGK+ ++ +RFA AAA++ V GA S+P R
Sbjct: 236 QVPGFRVDAKDTTAAGDTFNGALLTGLQEGKALDDAIRFAHAAAAISVTRMGAQTSIPHR 295
Query: 368 KSVLNLL 374
+ V L
Sbjct: 296 REVERFL 302
>gi|354565340|ref|ZP_08984515.1| ribokinase [Fischerella sp. JSC-11]
gi|353549299|gb|EHC18741.1| ribokinase [Fischerella sp. JSC-11]
Length = 308
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ RLP GET+ + GGKGANQA A+L PT VG+VG
Sbjct: 3 VIVFGSINLDLVATAPRLPLPGETLLGHDFLKVPGGKGANQAVALARLGIPTQMVGRVGA 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
+ + ++L V+ + NV+ D V +G A++++ GQN I+++ G N C ++
Sbjct: 63 QSFSAELIESLQAAAVQTE--NVLVDETVSSGVAIIIIDDTGQNQIVVIPGAN-GCVNQE 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ ++ +LLQ EIP S + A+ A++AGV VI D + +P EL +D
Sbjct: 120 DVTRMSRLLPESSALLLQLEIPLSTVVAAAQTAKTAGVTVILDPAPAQSNLPNELYPLVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE E G+L G P D E +A GV+ +VKLGA+G E
Sbjct: 180 IITPNEVEAGQLVGFPVDGQESAKKAAEALLNRGVKNAIVKLGAQGVVCATSAET----F 235
Query: 310 IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+PA + +DT AGD F A +G + + + AAA ++ GA S+PDR
Sbjct: 236 FVPAFPVKAVDTVAAGDAFNGGLAAAISQGLPLRQAIVWGAAAGAIAATKLGAQTSLPDR 295
Query: 368 KSVLNLLQ 375
+ L+
Sbjct: 296 LTFDTFLK 303
>gi|399019657|ref|ZP_10721803.1| ribokinase [Herbaspirillum sp. CF444]
gi|398097548|gb|EJL87852.1| ribokinase [Herbaspirillum sp. CF444]
Length = 308
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 156/312 (50%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV-- 127
+V++GS N D+ + + R+P GET+ +T+ GGKGANQA A+LS + V V
Sbjct: 2 IVIIGSINMDLVLRVPRMPLPGETITGGQFRTIPGGKGANQAVACARLSADSVKVAMVAC 61
Query: 128 -GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
G+DA G + AL G+ ++ + D +G A +++ +GQNSI++ G N
Sbjct: 62 LGDDAFGAELRAALRKDGIDDSHVTTIPD--TASGIASILVDDNGQNSIVLASGANAELS 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
P D ++++A IV+LQ E P I + A + G V+ + A +P ELL
Sbjct: 120 PAHI-DAARGLIEQARIVVLQLESPLPTVIHAIRLAHALGKTVVLNPAPAQA-LPTELLG 177
Query: 247 FIDILSPNESELGRLTGMPT-------DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF 299
ID L PNE E L GMP DS EQI+ + K G VLV LG KG ++
Sbjct: 178 QIDYLVPNEIEAAMLAGMPASGIRIENDSDEQIATVIGKLRAAGSTNVLVTLGEKG--VY 235
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
E + A + IDTT AGDTF F EG+S + + AA++ V G
Sbjct: 236 AALESGSEHFDAQAVKAIDTTAAGDTFIGGFVAALAEGRSEADAIALGQRAAAISVARVG 295
Query: 360 AIPSMPDRKSVL 371
A S+P R ++
Sbjct: 296 AQTSIPTRLEIV 307
>gi|297543752|ref|YP_003676054.1| ribokinase [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296841527|gb|ADH60043.1| ribokinase [Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 309
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 158/314 (50%), Gaps = 22/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ + + +P VGETV A + GGKGANQA A+L + +G+VG
Sbjct: 4 IVVVGSINMDVVIRVPHIPVVGETVIAYDLKNYGGGKGANQAVSIARLGGTVFMIGRVGN 63
Query: 130 DANGK-----LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
D GK L D++ G+ DY +PTG A + + G+N+I++ G N
Sbjct: 64 DEYGKKLYEGLKIDSIDVKGIEFDYE-------IPTGTAYINVSERGENNIVVYQGANKR 116
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
E+ + ++ +A + ++Q EIP V G+ VI + AP +P
Sbjct: 117 LNIEQIEKHE-DIFDEAKMCVIQLEIPVETVEFVVDLCYRKGIKVILNP----APACKLP 171
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
LL + IL+PNE+EL L+ ++ I +A GVQ V+ +G KGS +
Sbjct: 172 DTLLEKVYILTPNETELAFLSKSKIETIADIKKASKYLLDKGVQNVITTIGEKGSFFINK 231
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ + +I A +DTT AGD+FT + AV EGK+ E + FA A+L V +GA
Sbjct: 232 DTEKLFDAIKVTA--VDTTAAGDSFTGALAVALSEGKNIESAIEFATYVAALTVTKEGAQ 289
Query: 362 PSMPDRKSVLNLLQ 375
S+P R V ++
Sbjct: 290 SSLPYRDEVEKFIK 303
>gi|411009376|ref|ZP_11385705.1| ribokinase [Aeromonas aquariorum AAK1]
Length = 310
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 163/303 (53%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAQVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMKTGFAKDGI--DVSAVELDPKLPTGIAIIYVSDEGENSIGISAEANGALTPSV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ A +LLQ E+P ++ A+ AR+ G V+ + P+ ELL +D
Sbjct: 122 VKGHE-AMIAAAHTLLLQLEVPLESVLEAARLARAHGTRVVLNPAPAR-PLSSELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ +EA + H+MG+ +V++ LG++G V K +Q+
Sbjct: 180 LITPNQTEAELLTGVKVTDEASAAEAAARFHQMGIGEVMITLGSQG----VYCSKGQQQA 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G + +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVKAVDTTAAGDTFNGALLAAELAGADFDAAVRFAHGAAALSVTRFGAQSSIPSK 295
Query: 368 KSV 370
+ V
Sbjct: 296 QEV 298
>gi|354554588|ref|ZP_08973892.1| ribokinase [Cyanothece sp. ATCC 51472]
gi|353553397|gb|EHC22789.1| ribokinase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 163/311 (52%), Gaps = 15/311 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ + R P+ GET+ TL GGKGANQA AKL TYFVG+VG
Sbjct: 3 IVVFGSINMDMIAQTPRFPQPGETITGTHFITLPGGKGANQAVATAKLGRSTYFVGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + L + + V+ D +G A++ +++ G+NSII++ G N +
Sbjct: 63 DSLGRDLLKKLETFDI--NTQGVLIDKNTSSGVAMITVETSGENSIIVIPGANGNI---- 116
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+ +++ K ++LLQ EIP A A+ GV V+ D IP L
Sbjct: 117 -NESDVIRLEKILLKTSLLLLQLEIPLKAVEIAALEAKKLGVTVMLDPAPAPEKIPDSLY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PN++E +L G P E I +A + + GV+ V++KLG KG+ E E+
Sbjct: 176 PLIDIITPNQTEAAKLVGFPVSDTETIKKAAEELLQKGVKIVIIKLGQKGAFYATENEEG 235
Query: 306 IKQSIIPAA-RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ P A + IDT GAGD F A G S +E L++ A +L +GA ++
Sbjct: 236 F---VAPTAVKAIDTVGAGDGFNGGVAAALDRGLSLKEALKWGAIVGALTTTEEGAQTAL 292
Query: 365 PDRKSVLNLLQ 375
PD ++V L+
Sbjct: 293 PDLETVEQLIN 303
>gi|383115219|ref|ZP_09935977.1| ribokinase [Bacteroides sp. D2]
gi|313695364|gb|EFS32199.1| ribokinase [Bacteroides sp. D2]
Length = 304
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 10/310 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
++T +VV+GS+N D+ ++ DRLPK GET+ GGKGANQA A+L F
Sbjct: 1 MDTKKKIVVIGSSNTDMVIKSDRLPKPGETILGGNFLMNHGGKGANQAVAAARLGGDVTF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ ++G D G + G+ Y+ + P+G A++ + G+N I++ G N
Sbjct: 61 ICKIGNDIFGNETLEMFHKEGIDTTYVGITPQE--PSGVALINVDKKGENCIVVASGANG 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQ 242
+ + + +K+A IV++Q E P AK A+ G+ VI + A +P
Sbjct: 119 TLSVDDIQRAE-STIKQASIVIMQLETPIESVTYAAKMAKKDGITVILNPAPAPTQQLPD 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
+LL +DIL PN +E ++GM E EA+ G++ V++ +GAKG AL E
Sbjct: 178 DLLANVDILIPNVTEAEIISGMHITDDESAKEAIRYISSKGIKTVIITMGAKG-ALAYEN 236
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
K IPA +V +DTT AGDTF V EGK+ ++ + FA+ A+S+ V GA
Sbjct: 237 NKFTH---IPAFKVEAVDTTAAGDTFCGGLCVALSEGKNLKDAIIFASKASSISVTRMGA 293
Query: 361 IPSMPDRKSV 370
S+P RK +
Sbjct: 294 QVSIPLRKEI 303
>gi|423206609|ref|ZP_17193165.1| ribokinase [Aeromonas veronii AMC34]
gi|404622161|gb|EKB19026.1| ribokinase [Aeromonas veronii AMC34]
Length = 310
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 160/307 (52%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L P F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAPVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMKSGFAKDGI--DVSAVELDPKLPTGIAIIYVSDEGENSIGISAEANGAITPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ A +LLQ E+P + A+ AR+ G V+ + P+ ELL +D
Sbjct: 122 VKNHE-AMIADAHTLLLQLEVPLESVHEAARLARAHGTRVVLNPAPAR-PLSSELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ EA + H+MG+ V++ LG++G V +Q
Sbjct: 180 LITPNQTEAELLTGIKVTDEASAREAAARFHQMGIADVMITLGSQG----VYCSNAQQQQ 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVKAVDTTAAGDTFNGALLAAELAGADFHSAVRFAHGAAALSVTRFGAQISIPSK 295
Query: 368 KSVLNLL 374
+ V L
Sbjct: 296 QEVDTFL 302
>gi|326389319|ref|ZP_08210887.1| ribokinase [Thermoanaerobacter ethanolicus JW 200]
gi|325994682|gb|EGD53106.1| ribokinase [Thermoanaerobacter ethanolicus JW 200]
Length = 309
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 158/314 (50%), Gaps = 22/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ + + +P VGETV A + GGKGANQA A+L + +G+VG
Sbjct: 4 IVVVGSINMDVVIRVPHIPVVGETVIAYDLKNYGGGKGANQAVSIARLGGTVFMIGRVGN 63
Query: 130 DANGK-----LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
D GK L D++ G+ DY +PTG A + + G+N+I++ G N
Sbjct: 64 DEYGKKLYEGLKIDSIDVKGIEFDYE-------IPTGTAYINVSERGENNIVVYQGANKR 116
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
E+ + ++ +A + ++Q EIP V G+ VI + AP +P
Sbjct: 117 LNIEQIEKHE-DIFDEAKMCVIQLEIPVETVEFVVDLCYRKGIKVILNP----APACELP 171
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
LL + IL+PNE+EL L+ ++ I +A GVQ V+ +G KGS +
Sbjct: 172 DTLLEKVYILTPNETELAFLSKSKIETIADIKKASKYLLDKGVQNVITTIGEKGSFFINK 231
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ + +I A +DTT AGD+FT + AV EGK+ E + FA A+L V +GA
Sbjct: 232 DTEKLFDAIKVTA--VDTTAAGDSFTGALAVALSEGKNIESAIEFATYVAALTVTKEGAQ 289
Query: 362 PSMPDRKSVLNLLQ 375
S+P R V ++
Sbjct: 290 SSLPYRDEVEKFIK 303
>gi|420207397|ref|ZP_14712888.1| ribokinase [Staphylococcus epidermidis NIHLM008]
gi|394275349|gb|EJE19726.1| ribokinase [Staphylococcus epidermidis NIHLM008]
Length = 307
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 157/312 (50%), Gaps = 26/312 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
++V+GS N D ++ + R PK GET+ +Q GGKGANQA ++L+ T F+ +VG
Sbjct: 6 VIVIGSTNVDKFLNVKRFPKPGETLHINQAQKEFGGGKGANQAIAASRLAADTTFISKVG 65
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D N I + G+ Y ++ TG A + + GQN+I++ GG NM+
Sbjct: 66 KDGNANFILEDFKKAGIHTQY--ILTSESEETGQAFITVDEAGQNTILVYGGANMTLSA- 122
Query: 189 KFGDEDLEVVKKAGI----VLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
D+E+ A I V+ Q E+P Q K AR + + + AP +P
Sbjct: 123 ----TDVEMSADAFIGADFVVAQLEVPFEAIEQAFKIARKQNITTVLNP----APAIELP 174
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
+ LL DI+ PNE+E LTG+ ++ + E ++G+ VL+ LG +G+ +
Sbjct: 175 KSLLELTDIIIPNETEAELLTGISINNESDMKETATYFLELGISAVLITLGEQGTYYAYQ 234
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVK 358
+ ++PA V IDTT AGDTF +F + S E + A A+SL VQ K
Sbjct: 235 EQ----YKMVPACNVKAIDTTAAGDTFIGAFLSELNKDLSNIESAIGLANQASSLTVQRK 290
Query: 359 GAIPSMPDRKSV 370
GA S+P RK V
Sbjct: 291 GAQASIPTRKEV 302
>gi|334138899|ref|ZP_08512302.1| ribokinase [Paenibacillus sp. HGF7]
gi|333603546|gb|EGL14958.1| ribokinase [Paenibacillus sp. HGF7]
Length = 307
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 15/303 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + ++ LP GET+ A GGKG NQA A+L +F+G+VG
Sbjct: 4 ICILGSINMDSSLLLESLPHEGETIFATGKLVGPGGKGFNQAVSAARLGASVHFIGKVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + L G+ +++ V D +PTG A+++ S G N I++ G+NM +
Sbjct: 64 DEYGKQLVSTLQQEGIHTEHVGVNPD--LPTGEALILFSSSGSNMIVVSAGSNMGITTQD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+E E++K + ++L Q E+P V + A+ G + + A IP LL D
Sbjct: 122 I-EESREIIKLSDVILAQFEVPIEVIQHIFTIAKEEGKVTVLNPAPAKA-IPPTLLQVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE+ +TG T+S + + + K GV V+V LG +GS L + +
Sbjct: 180 FLIPNESEMHMITGCDTNSEQDMVQGAETLLKQGVGCVIVTLGDRGS-LICHRDGNLS-- 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE-----ECLRFAAAAASLCVQVKGAIP 362
IPA +V IDTT AGD+F SF + ++ E ++FA+ +S+ VQ KGA
Sbjct: 237 -IPAEKVSAIDTTAAGDSFIGSFCTKLRRQERKQLGHVAEAVKFASRFSSIVVQRKGAFQ 295
Query: 363 SMP 365
S+P
Sbjct: 296 SIP 298
>gi|334125263|ref|ZP_08499253.1| ribokinase [Enterobacter hormaechei ATCC 49162]
gi|333387237|gb|EGK58439.1| ribokinase [Enterobacter hormaechei ATCC 49162]
Length = 412
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 165/309 (53%), Gaps = 13/309 (4%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
++GS N DI +DR P+ GE++ ++ + GGKGANQA +K + T+FVG+VG D
Sbjct: 103 ILGSFNVDIIANVDRFPQSGESIFSENTIIGPGGKGANQALAVSKCNVKTHFVGKVGNDQ 162
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPEKF 190
++ + LS + D + +D TG A++ + QSDG+N I I G N S ++
Sbjct: 163 FSQMAFEHLSSSAI--DSFTLYQDKDQKTGTALIYVCQSDGENMIAISPGANRSITADEV 220
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
E VK + I L Q E + + AR G+ V+ + + + L N +D
Sbjct: 221 EAITPE-VKNSDIFLTQLENNLPATFRAIEIARRNGIKVVLNPAPWSSDVVSCLKN-VDF 278
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
L+PNE+E L+G+ +A MGV V++ +GAKG AL +GE+ I
Sbjct: 279 LTPNETEASLLSGIHIMDLASAKDAARAIKAMGVGHVIITMGAKG-ALIYDGEQFIH--- 334
Query: 311 IPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
IPA + +DTTGAGD F +FA +G+S + +FA A ASL V+ +GA +MP+ K
Sbjct: 335 IPALKAVCVDTTGAGDAFNGAFAAAMAKGESIIQAAKFACAFASLAVEKEGA-SNMPEYK 393
Query: 369 SVLN-LLQY 376
VL L QY
Sbjct: 394 DVLTRLAQY 402
>gi|170703423|ref|ZP_02894197.1| ribokinase [Burkholderia ambifaria IOP40-10]
gi|170131668|gb|EDT00222.1| ribokinase [Burkholderia ambifaria IOP40-10]
Length = 309
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 156/310 (50%), Gaps = 9/310 (2%)
Query: 62 NPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPT 121
NP+ PP + VVGS N D+ RLP GET+ + QT+ GGKGANQA A+L
Sbjct: 3 NPVK-PPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGASV 61
Query: 122 YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGT 181
+G VG DA G + DAL+ R+D ++ + G TG A + + + G NSI++V G
Sbjct: 62 AMIGCVGNDAFGARLHDALA--AERIDVTHLRRIDGEATGVATITVDAHGANSIVVVPGA 119
Query: 182 NMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP 241
N +C D +V+ A +++ Q E+P + +A + PV+ + P+
Sbjct: 120 N-ACVDAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAIAHRTPVLLNPAPAR-PLF 177
Query: 242 QELLNFIDILSPNESELGRLTGMPT-DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
LL ID L NE+E LTG+P D + A C K GV VLV LGA+G +
Sbjct: 178 DALLARIDYLVVNETEAESLTGIPVGDDASAVRAADALCAK-GVGNVLVTLGARG--VCW 234
Query: 301 EGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
G + A +DTT AGDTF FA G S ++ + F AA++ V GA
Sbjct: 235 RGAAGHGRHRARAVVAVDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHGA 294
Query: 361 IPSMPDRKSV 370
S+P R+ V
Sbjct: 295 QTSIPTREEV 304
>gi|335356399|ref|ZP_08548269.1| ribokinase [Lactobacillus animalis KCTC 3501]
Length = 308
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 163/315 (51%), Gaps = 26/315 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D +++ RLP GET+ + GGKGANQA A+ T F+G+VG
Sbjct: 5 VTVLGSLNVDNIMQVKRLPLPGETMTMSAKKIAGGGKGANQAIAAARSGAQTAFIGKVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+L+ L + + + + TG A ++LQ +G+NSI+++GG N +
Sbjct: 65 DEQGRLMKGYLEDAKIDATSVTLATE---ETGQAFILLQENGENSILVLGGANQAIT--- 118
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
D+D+E K+ A ++ Q E P +I K A+ V I + AP +P+
Sbjct: 119 --DDDIEAAKEKITTADFLITQFETPIEASITAFKYAKENDVVTILNP----APAKRVPE 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
LL +D++ NE+E LT + D E +A K KMGV+ ++ LG+KG+
Sbjct: 173 ALLKNVDLIVLNETETELLTEIKIDEEESWHQAAAKLAKMGVKNTIITLGSKGAYY---- 228
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKG 359
+ + I A +V +DTT AGDTF + + + S EE + FA+ A++L VQ G
Sbjct: 229 KTTTAEGFIKAFKVATLDTTAAGDTFLGALSSQLHKDLSNIEEAIVFASMASALAVQKLG 288
Query: 360 AIPSMPDRKSVLNLL 374
AIPS+P V + L
Sbjct: 289 AIPSIPQLSEVNDAL 303
>gi|392970061|ref|ZP_10335470.1| ribokinase [Staphylococcus equorum subsp. equorum Mu2]
gi|403045990|ref|ZP_10901465.1| ribokinase [Staphylococcus sp. OJ82]
gi|392511989|emb|CCI58677.1| ribokinase [Staphylococcus equorum subsp. equorum Mu2]
gi|402764152|gb|EJX18239.1| ribokinase [Staphylococcus sp. OJ82]
Length = 287
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 161/304 (52%), Gaps = 24/304 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS++ D+ V+ D LP+ GETV + T GGKGANQA A+LS+ Y +G VG+
Sbjct: 4 IVVIGSSSIDLVVKTDVLPQAGETVMGNSFFTTTGGKGANQAVAAARLSNKVYMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK I + L V +M+ +++ T H + + + D N II+V N PEK
Sbjct: 64 DENGKQIIENLEQNNVDTTFMDKIENETSGTAH-ITLFEDD--NRIIVVPAANNHVTPEK 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ LE I+L+Q EIP+ +V A + VI + AP I +E+++
Sbjct: 121 VLPK-LERFGAGDIILMQHEIPEHTIKEVTDYAVKQDMKVILNP----APYRNIDKEIID 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ ++PNESE L +E + +K + ++++V GA G+ + + ++ +
Sbjct: 176 KVTWITPNESESELL-------FENGVDEALKAYP---RKLIVTKGAAGAMFYNDSQQLV 225
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
K +V+DTTGAGDTF + AV +E K EE + FA A S V GA +MP
Sbjct: 226 KGY---KKKVVDTTGAGDTFNGALAVALIENKPLEEAVDFANLAGSFSVTELGAQGAMPY 282
Query: 367 RKSV 370
RK +
Sbjct: 283 RKEL 286
>gi|167034484|ref|YP_001669715.1| ribokinase [Pseudomonas putida GB-1]
gi|166860972|gb|ABY99379.1| ribokinase [Pseudomonas putida GB-1]
Length = 302
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 150/297 (50%), Gaps = 7/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVARAQRLPRAGETLPGESFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V GV +G A++ + + QN I+I+ G N P
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVSTCPGVSSGVALITVDAASQNCIVIIPGANGLLTPRS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ A +++ Q E+P G VI + P+P + ID
Sbjct: 123 VQRFD-ALLQAAEVIICQLEVPAETVAWTLARGHELGKQVILNPAPATGPLPADWFAHID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFVEGEKPIKQ 308
L+PNESE LTGM E A + ++G +V++ LGA+G+ + +G +
Sbjct: 182 YLTPNESEAEALTGMAVTDQESARRAGERLLQLGAGKVIITLGAQGALRITAQGHQHYPA 241
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
S++ + +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 242 SVV---QPLDTTAAGDTFVGGFAAGLVRGLEEGEAIVFGQRAAALSVTRAGAQPSIP 295
>gi|20806728|ref|NP_621899.1| ribokinase family sugar kinase [Thermoanaerobacter tengcongensis
MB4]
gi|254478103|ref|ZP_05091486.1| ribokinase [Carboxydibrachium pacificum DSM 12653]
gi|20515184|gb|AAM23503.1| Sugar kinases, ribokinase family [Thermoanaerobacter tengcongensis
MB4]
gi|214035965|gb|EEB76656.1| ribokinase [Carboxydibrachium pacificum DSM 12653]
Length = 306
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 158/315 (50%), Gaps = 24/315 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N DI + + R+P VGETV A + GGKGANQA A+L +G+VG
Sbjct: 4 IVVVGSINMDIVIRVPRIPVVGETVIAYDLKNYGGGKGANQAVSIARLGGNVSMIGRVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC---- 185
D G+ + L GV ++ + D PTG A + + G+N+I++ G N
Sbjct: 64 DEYGQKLYRDLKSNGVGVEGIEF--DSETPTGTAYINVSEKGENNIVVYQGANKRLNMTQ 121
Query: 186 --WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---I 240
E F DE A I LLQ EIP V S G+ VI + AP +
Sbjct: 122 IKRYEHFFDE-------AEICLLQLEIPIETVKFVVDLCYSRGIKVILNP----APAYEL 170
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
P +L + IL+PNE+EL L+ ++ E I +A GVQ V+ +G KGS
Sbjct: 171 PDTVLEKVYILTPNETELAFLSKSKIETIEDIRKASKYLLDKGVQNVITTIGEKGSYFIN 230
Query: 301 EGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+ + + +I A +DTT AGD+FT + A +G+ E+ +RFA A+L V +GA
Sbjct: 231 KNTEKLFDAIKVTA--VDTTAAGDSFTGALAFALSKGEKIEDAIRFATFVAALTVTKEGA 288
Query: 361 IPSMPDRKSVLNLLQ 375
S+P ++ V ++
Sbjct: 289 QTSLPYKEEVEKFIK 303
>gi|154492688|ref|ZP_02032314.1| hypothetical protein PARMER_02325 [Parabacteroides merdae ATCC
43184]
gi|423723669|ref|ZP_17697818.1| ribokinase [Parabacteroides merdae CL09T00C40]
gi|154086993|gb|EDN86038.1| ribokinase [Parabacteroides merdae ATCC 43184]
gi|409241379|gb|EKN34149.1| ribokinase [Parabacteroides merdae CL09T00C40]
Length = 309
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 154/303 (50%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ ++ LP+ GET+ T GGKGANQA A+L F+ + G
Sbjct: 11 ILVVGSCNTDMVIKAAHLPRPGETILGGTFFMNPGGKGANQAVAIARLGGSVTFICKTGS 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y V D G P+G A++ + +N I++ G N + P
Sbjct: 71 DIFGHQSQQLFEEEGINTSY--VFSDSGNPSGVALITVDEKAENCIVVASGANANLLPSD 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ E ++ A ++L+Q E+P VA A G VI + P+P +LL+ +
Sbjct: 129 LAKAE-EAIELADLILMQLEVPMETVCFVADIAWQKGKKVILNPAPAH-PLPADLLHHLY 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E +TG+ EA MGVQ V++ LG+KG+ + +GE
Sbjct: 187 LITPNETEAEMITGVKITDDISAVEAARVLSGMGVQHVIITLGSKGALICSDGEA----E 242
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+PA +V +DTT AGD F + V EG++ +E +RFA A+++ V GA S P R
Sbjct: 243 IVPALKVEAVDTTAAGDVFNGALTVALSEGRNLKESVRFACKASAISVTRVGAQSSAPYR 302
Query: 368 KSV 370
V
Sbjct: 303 NEV 305
>gi|406838472|ref|ZP_11098066.1| ribokinase [Lactobacillus vini DSM 20605]
Length = 308
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 152/299 (50%), Gaps = 11/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D ++++ P GETV A + AGGKGANQA A+ YF+G+VG+
Sbjct: 4 ITVVGSLNIDTTLQVNSFPLPGETVKALNKSSTAGGKGANQAVAAARSGAKVYFIGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + +AL ++D ++ + + TG A ++L +GQNSI++ GG N
Sbjct: 64 DQQGKFLIEALKEE--KIDVSSIKLEKRIGTGTANIILDKNGQNSIVVYGGANGHLDSLD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E+ +++ + ++ Q E P +V K A G I + + I ELL D
Sbjct: 122 INQEENKII-NSDFIIAQFETPQKATKEVFKLAHKYGKKTILNPAPAN-RIDTELLGLTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE E +TG+ ++ + E K H GV+ ++ LG KG E +
Sbjct: 180 IIIPNEFESSEITGIKVKDFKSMQENSRKFHNFGVKATIITLGNKGVFYSFNDE----EK 235
Query: 310 IIPAAR--VIDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
++PA + VIDTT AGDTF +F + + + +A A++L +Q GA S+P
Sbjct: 236 VVPAEKVSVIDTTAAGDTFIGAFGAKLNLTMNNFTSAIDYAQKASALTIQRLGAQVSIP 294
>gi|224536955|ref|ZP_03677494.1| hypothetical protein BACCELL_01831 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521442|gb|EEF90547.1| hypothetical protein BACCELL_01831 [Bacteroides cellulosilyticus
DSM 14838]
Length = 302
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 154/301 (51%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ ++ DRLP GET+ + GGKGANQA A+L +F+ + G
Sbjct: 5 IIVIGSCNTDMVIKADRLPVPGETIIGGSFMMNPGGKGANQAVAAARLKGNVHFIAKTGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + G+ ++ N+ D +P+G A++M+ +G+NSI I G N S PE
Sbjct: 65 DLFGKRSIEQYEDEGIHVE--NIYSDLTLPSGVALIMVDMNGENSIAIASGANGSLSPED 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++K I+L+Q EIP A+ A G+ VI + A + +LL +
Sbjct: 123 IRKAQ-PTIEKGDILLMQLEIPIETVEYAAQIASEQGIKVILNPAPARA-LSNKLLQNLY 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E L+G+ +E A GV V++ LG+KG+ ++ + +
Sbjct: 181 MIIPNETEAEILSGIKVTDWESARRAADIISAKGVDIVVITLGSKGA--LIKEKDTFHEV 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+P + +DTT AGDTF + V E ++FA AS+ V GA PS+P RK
Sbjct: 239 PVPKVKAVDTTAAGDTFCGALCVALSEDVDVLNAVKFANKCASITVTRMGAQPSLPYRKE 298
Query: 370 V 370
+
Sbjct: 299 I 299
>gi|260774113|ref|ZP_05883028.1| ribokinase [Vibrio metschnikovii CIP 69.14]
gi|260611074|gb|EEX36278.1| ribokinase [Vibrio metschnikovii CIP 69.14]
Length = 306
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 24/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPTFPRPGETLHGRNYQVIPGGKGANQAVAAARLTADIGFIACVGD 63
Query: 130 DANGKLITDALSGCG-VRLDYMNV--VK-DGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
DA G + C +LD M++ VK PTG A++ + G+NSI + N
Sbjct: 64 DAFG------IESCERFKLDGMDIRGVKVQADCPTGIAMIQVSDHGENSICLSAEANDRL 117
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
E D DL ++ A +L+Q E P I+ A+ A+ A V+ + AP +P
Sbjct: 118 TAEAIED-DLPRIRAASYLLMQLETPIDGIIKAAQVAKQAKTNVVLNP----APARELPS 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
LL+ +D+++PNE+E LTG+ +A H+ G++ V++ LGAKG L G
Sbjct: 173 SLLSCVDVITPNETEAQVLTGITVTDDASAQQAATVLHQQGIEIVIITLGAKGVWLSENG 232
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+ +IP RV DTT AGDTF +F G +E S E ++FA AAA++ V GA
Sbjct: 233 ----RGQLIPGFRVSATDTTAAGDTFNGAFVTGLLENMSLESAIKFAHAAAAISVTRFGA 288
Query: 361 IPSMPDRKSVLNLL 374
S+P R+ V L
Sbjct: 289 QTSIPTRQEVDEFL 302
>gi|90580509|ref|ZP_01236315.1| ribokinase [Photobacterium angustum S14]
gi|90438418|gb|EAS63603.1| ribokinase [Vibrio angustum S14]
Length = 306
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 168/314 (53%), Gaps = 17/314 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G L+ D G+ D V + G PTG A++ + G+NSI + N + E+
Sbjct: 64 DAFGMLMHDNFVKDGI--DVSGVKTEVGTPTGIAMIQVSDCGENSICLSAEAN-NKLTEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DL+ +++A +L+Q E P + AK A+SA VI + AP + ELL
Sbjct: 121 AIESDLDTIRQAEYLLMQLETPMCGIEKAAKVAKSANTTVILNP----APARELSDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ + +A H G++ V++ LGAKG L G
Sbjct: 177 CVDVITPNETEAEVLTGVTVTDNQSAQQAADILHGKGIKTVMITLGAKGVWLSQNGSG-- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
II RV DTT AGDTF + G +E + E ++FA AAA++ V GA S+
Sbjct: 235 --DIISGFRVEATDTTAAGDTFNGALVTGLLEDLALESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV-LNLLQYA 377
P R+ V L L Q+A
Sbjct: 293 PTREEVDLFLAQHA 306
>gi|422589871|ref|ZP_16664530.1| ribokinase [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330876777|gb|EGH10926.1| ribokinase [Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 306
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 157/309 (50%), Gaps = 15/309 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G +G
Sbjct: 5 VVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCIGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL R+D V GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGQQLRAAL--LAERIDCQAVTVVEGVSTGIASIVVDANSQNAIVIVAGGNGRLTPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F ++ + IV+ Q E+P AR+ G VI + P+P
Sbjct: 123 IERFD----ALLAGSEIVICQLEVPTETVFHTLSRARALGKTVILNPAPASEPLPANWYG 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS +A G + V++ LG +G+ LF
Sbjct: 179 LIDYLIPNESEAQTLTGVTVDSSAAAEQAATAMLAAGARNVIITLGERGT-LFANAAGVE 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IPA RV +DTT AGDTF FA G+ + +RF AAA++ V GA PS+
Sbjct: 238 H---IPARRVQAVDTTAAGDTFVGGFAAALAAGQGESQAIRFGQAAAAISVTRAGAQPSI 294
Query: 365 PDRKSVLNL 373
P + V L
Sbjct: 295 PTFEEVQEL 303
>gi|305662700|ref|YP_003858988.1| ribokinase [Ignisphaera aggregans DSM 17230]
gi|304377269|gb|ADM27108.1| ribokinase [Ignisphaera aggregans DSM 17230]
Length = 316
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 151/268 (56%), Gaps = 10/268 (3%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
VVGS + D Y+++ +LP+ ETV + GGKGANQA C A+L TY +G+VG+D
Sbjct: 6 VVGSIHMDFYIKLPKLPQPDETVMGYGFTMMPGGKGANQAVCAARLGAKTYMIGRVGKDI 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
G+ +L+ GV +DY+ + D TG A ++L + G+N I + GT+ E+
Sbjct: 66 FGERALQSLASAGVNIDYVAI--DEEAHTGIAFILLNTAGENMIAVAPGTDYRV-SERDV 122
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
D ++V+K++ +LLQ EIP + + AK A GV V+ + A +P+EL ++ID+L
Sbjct: 123 DRAIDVIKQSDSLLLQLEIPINTVVYAAKIAYRHGVRVLLNPAPAMA-LPKELYSYIDVL 181
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSII 311
PN +E LT + +S + +A + MGV+ V++ +G +G+ + K +
Sbjct: 182 VPNRTEAEMLTSIKINSIDDAVKAGRELIGMGVENVIITMGNRGAVIV---SKDFYHH-V 237
Query: 312 PAAR--VIDTTGAGDTFTASFAVGFVEG 337
PA + V+DTTGAGD F A+ V G
Sbjct: 238 PAFKVDVVDTTGAGDVFVAALGVFLSRG 265
>gi|373858194|ref|ZP_09600932.1| ribokinase [Bacillus sp. 1NLA3E]
gi|372452007|gb|EHP25480.1| ribokinase [Bacillus sp. 1NLA3E]
Length = 302
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 158/310 (50%), Gaps = 16/310 (5%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T + V+GS N D+ + +++PKVGET+ + T+ GGKGANQA A+L +G
Sbjct: 5 TNKKITVIGSINMDLVTKTNQIPKVGETLIGEAFHTIPGGKGANQAVAAARLGSDVTLIG 64
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG D+ G +T L + + + V D TG A + L S+G NSII+V G N +
Sbjct: 65 CVGADSFGVELTKHLYNQSINTENVEPVTD--CSTGIASITL-SNGDNSIIVVPGANYAV 121
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ F + EV+ + I+LLQ EIP I A+ AR V +I + + P+P+ LL
Sbjct: 122 TTD-FVAKHEEVIANSDILLLQLEIPLESVIMAAELARKHDVLIILNPAPIQ-PLPKSLL 179
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+D L+PNE E L + E++ E KC +V G+KG +LF +GE
Sbjct: 180 KMVDYLTPNEHEQELLLTSCDWTAEELREIKEKC--------IVTKGSKGVSLFKDGEIQ 231
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ + A +DTTGAGD+F + A G + EE RFA ++ V GA MP
Sbjct: 232 LPSYKVEA---VDTTGAGDSFNGALAYSLSNGANLEEACRFANIVGAISVTKLGAQSGMP 288
Query: 366 DRKSVLNLLQ 375
+ V LQ
Sbjct: 289 TIQEVELFLQ 298
>gi|330816802|ref|YP_004360507.1| Ribokinase [Burkholderia gladioli BSR3]
gi|327369195|gb|AEA60551.1| Ribokinase [Burkholderia gladioli BSR3]
Length = 313
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 147/297 (49%), Gaps = 5/297 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLPK GET++ AGGKG NQA A+L +G VG+
Sbjct: 14 VAVVGSLNMDLIVRAPRLPKPGETLSGHGYAQAAGGKGGNQAVAAARLGARVTMLGCVGD 73
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG + AL G+ + ++ GV TG A++++ QN+I+IV G N P
Sbjct: 74 DANGTALRGALEAEGIDCAALATARE-GVATGVALIVVDDASQNAIVIVAGGNGEVTPAG 132
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ A +++ Q E P +A R G V+ + + P+P L +D
Sbjct: 133 VARHE-AMIAAADVLVCQLETPLPAVKAALEAGRRHGRVVVLNPAPVLGPLPDGWLPLVD 191
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFVEGEKPIKQ 308
L PNE E LTGM + E A + + G + V+V LGA+G+ A +G +
Sbjct: 192 WLIPNELEAAALTGMTIATPEDAQAAAGQLREAGARNVIVTLGAQGAFAALADGTA--RH 249
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P +DTT AGDTF + G + + +RFA AA+L V GA PS+P
Sbjct: 250 YPAPKVEAVDTTAAGDTFIGGLSARLAAGDAPDAAIRFAQRAAALSVTRAGAQPSIP 306
>gi|91224727|ref|ZP_01259987.1| ribokinase [Vibrio alginolyticus 12G01]
gi|91190273|gb|EAS76542.1| ribokinase [Vibrio alginolyticus 12G01]
Length = 305
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 160/306 (52%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ID+++PNE+E LTG+ E EA H G++ V++ LGAKG L G
Sbjct: 177 YIDVITPNETEAEVLTGITVTDNESAQEAANVLHGKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ II RV DTT AGDTF +F G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIISGFRVEATDTTAAGDTFNGAFVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV 370
P R+ V
Sbjct: 293 PTREEV 298
>gi|323489170|ref|ZP_08094402.1| ribokinase [Planococcus donghaensis MPA1U2]
gi|323397057|gb|EGA89871.1| ribokinase [Planococcus donghaensis MPA1U2]
Length = 293
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 161/307 (52%), Gaps = 28/307 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V+ D PK GET T+ GGKGANQA A+L +G VG+
Sbjct: 2 ITVVGSINMDLVVKTDNFPKQGETTLGTLYTTVPGGKGANQAVAAARLGSAVQMIGAVGQ 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + L GV +D VK +G A ++L S+G N II+V G N + E+
Sbjct: 62 DAFGTELLAGLKSEGVLIDQ---VKRTDGTSGIANILL-SEGDNRIIVVPGANHNVTIEE 117
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP-----QEL 244
D + + K+ +V++Q E+P SV + + GVP I + P P E+
Sbjct: 118 I-DALADQLVKSELVIMQLEMPISVVQRTLEICHQNGVPSILN------PAPASGFTMEM 170
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L F L+PNE+E + G+ ++E+ E +++V LG KG A F +GEK
Sbjct: 171 LPFCTYLTPNETEAEEIFGV---NWEKALEKYPN-------RLVVTLGQKG-AQFFDGEK 219
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ P A+ +DTTGAGDTF + A VE K E +RFA AAASL V+ GA M
Sbjct: 220 HVLVEGFP-AKAVDTTGAGDTFNGALATALVEEKEFEWAVRFANAAASLSVEKFGAQGGM 278
Query: 365 PDRKSVL 371
P+R +VL
Sbjct: 279 PERTAVL 285
>gi|28210620|ref|NP_781564.1| ribokinase [Clostridium tetani E88]
gi|28203058|gb|AAO35501.1| ribokinase [Clostridium tetani E88]
Length = 308
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 8/302 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS D+ + R P GET+ K+ GGKGANQA A+L +G++G+
Sbjct: 6 ILVIGSFMMDLVAQTPRAPIEGETIIGKSFSQFTGGKGANQAVAAARLGAYVTMIGKLGK 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ ++L G+ DY V+ D +G + L+ +G N II++ G N+ P++
Sbjct: 66 DSFGEAHIESLRREGINHDY--VLFDDVESSGVGHITLEENGNNRIIVIPGANLKLTPKE 123
Query: 190 FGDEDLE-VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
EDLE +K + IV+LQ EIP + + A G +I + A + + + +
Sbjct: 124 V--EDLEDNIKSSDIVILQLEIPFETVYKTIELAHKHGKTIILNPAPA-AKLKEHFVELV 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D + PNESE LTG+ +S E +A +G + V++ LG KG L E+ ++
Sbjct: 181 DYIVPNESEASLLTGIKVNSIESARKAAKSLLNLGCKNVIITLGEKGVLLVNNNEEIFQE 240
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
S + +DTT AGD+F +FA G + L FA A +L V GA PS+P
Sbjct: 241 SF--KVKPVDTTAAGDSFIGAFAYSLANGLGNVKSLEFACAVGALTVTKIGAQPSLPKLT 298
Query: 369 SV 370
V
Sbjct: 299 EV 300
>gi|403668095|ref|ZP_10933392.1| ribokinase [Kurthia sp. JC8E]
Length = 303
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 163/303 (53%), Gaps = 19/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ E+D + + G+T++ + GGKGANQA A+L F+G VG
Sbjct: 5 IAVVGSINIDLVYEVDEIVQEGQTISTRDHHLFFGGKGANQAMTAAQLGADVTFIGSVGT 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ L G+ D ++ KDG TG A++ L SD +N+I++ G N + E+
Sbjct: 65 DGYGEQALLNLQRNGI--DTSSIRKDG--LTGQAIIQLSSDAENAILLFAGANHNVTAEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ V++++ +LLQ EIP + + A + +I + A + +LL+ +D
Sbjct: 121 V-EASRTVIEESDFLLLQLEIPMPAIEKAIEIAHGSQTKIIVNPAPSHA-LSDQLLSKVD 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKM---GVQQVLVKLGAKGSALFVEGEKPI 306
L+PN +EL L+G+P + E + C K+ GV V+V LG +GS F
Sbjct: 179 YLTPNRTELESLSGIPFNE----DELHIACQKLIEKGVGCVIVTLGKQGSYYFSGN---- 230
Query: 307 KQSIIPAARVI--DTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K ++P+ ++I DTTGAGD F+ + AV +EG + E+ + +A+ A V KGA P +
Sbjct: 231 KYGLLPSNKMIPVDTTGAGDAFSGTLAVALLEGFALEDAIVYASDVAGFVVTQKGAQPEI 290
Query: 365 PDR 367
P++
Sbjct: 291 PEK 293
>gi|347521552|ref|YP_004779123.1| ribokinase [Lactococcus garvieae ATCC 49156]
gi|385832936|ref|YP_005870711.1| ribokinase [Lactococcus garvieae Lg2]
gi|343180120|dbj|BAK58459.1| ribokinase [Lactococcus garvieae ATCC 49156]
gi|343182089|dbj|BAK60427.1| ribokinase [Lactococcus garvieae Lg2]
Length = 302
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 9/304 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + +PK GET+ AK T GGKGANQA + T+F+G +G+
Sbjct: 4 ITIIGSINLDTTLRVSNMPKPGETLHAKEHFTAGGGKGANQAVAAKRSGADTFFIGAIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+++ + L + + +++ TG A + + G+NSI+I G N + PE
Sbjct: 64 DGAGQMMRELLEYEDIDTSAVQLLE--SQSTGQAFITVDDSGENSIMIFSGANNAFTPEH 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ + ++ Q E + K A+ V I + IPQELL D
Sbjct: 122 V-ENSKHIIENSDFLIAQFESALDSTVAAFKCAKENKVRTILNPAPARTDIPQELLATTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A H +G++ V++ LG+KG+ + K K
Sbjct: 181 IIVPNETEAELITGIKVEDEHSLKAAADYFHNLGIEAVIITLGSKGAYYDI---KDGKSG 237
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S E+ + + + A+SL VQ GA PS+P
Sbjct: 238 IIPAFKVAAVDTTAAGDTFIGALSTVLKADFSNIEDAILYGSKASSLTVQRYGAQPSIPY 297
Query: 367 RKSV 370
+ +
Sbjct: 298 KNEL 301
>gi|312880470|ref|ZP_07740270.1| ribokinase [Aminomonas paucivorans DSM 12260]
gi|310783761|gb|EFQ24159.1| ribokinase [Aminomonas paucivorans DSM 12260]
Length = 303
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 158/305 (51%), Gaps = 12/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ ++ RLP +GET+ T GGKGANQ+ A++ +G+VG+
Sbjct: 4 IVVVGSLNLDLVMQTPRLPALGETLLGGPFSTAEGGKGANQSVACARMGASVDHLGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + ++L GV + ++ D PTG A + + + G N+I++ G N P+
Sbjct: 64 DPFGGRLLESLLREGVGVAGVHACPD--APTGVAQISV-AGGDNAIVVAPGANGRLTPQD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + AG L Q E+P + ARS GVP I + P+PQE+L+ +D
Sbjct: 121 L-RADARLFDGAGAALFQLEVPLDAVAEGLDLARSRGVPTILNPAPWQ-PLPQEVLDRVD 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L N EL + +G E E + + + GV +V++ GA+G+ E+ +
Sbjct: 179 TLVLNRVELAQCSG-----REGAEEGLERILERGVPRVVLTAGAEGAYYRTREER--GRV 231
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P RV+DTTGAGDTF +FAV EG S EE +R+ A +L GA PS+P R+
Sbjct: 232 PAPQVRVVDTTGAGDTFVGAFAVLLAEGASLEEAVRWGVHAGALACTRLGAQPSIPVRRE 291
Query: 370 VLNLL 374
V L
Sbjct: 292 VEAFL 296
>gi|260777268|ref|ZP_05886162.1| ribokinase [Vibrio coralliilyticus ATCC BAA-450]
gi|260606934|gb|EEX33208.1| ribokinase [Vibrio coralliilyticus ATCC BAA-450]
Length = 306
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 165/314 (52%), Gaps = 22/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ T F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADTGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVV---KDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
DA G I + ++D +N+ PTG A++ + G+NSI I N
Sbjct: 64 DAFGINIRENF-----KMDNINIAGVKMQPNCPTGIAMIQVAESGENSICISAEANAKLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
+ + DLE +++A +L+Q E P + A+ A+++ VI + AP + E
Sbjct: 119 EDAI-EFDLERIRQANYLLMQLETPMCGIEKAAQVAKASRTNVILNP----APARELSDE 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL+ ID+++PNE+E LTG+ E EA H+ G++ VL+ LGAKG L G
Sbjct: 174 LLSCIDVITPNETEAEVLTGVTVTDNESAQEAANTLHRKGIEIVLITLGAKGVWLSQNG- 232
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ +IP RV DTT AGDTF + G +E E ++FA AAA++ V GA
Sbjct: 233 ---RGELIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQ 289
Query: 362 PSMPDRKSVLNLLQ 375
S+P R V L+
Sbjct: 290 TSIPSRDEVDAFLE 303
>gi|398889075|ref|ZP_10643035.1| ribokinase [Pseudomonas sp. GM55]
gi|398189966|gb|EJM77221.1| ribokinase [Pseudomonas sp. GM55]
Length = 293
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ RLPK GET+ + T++GGKGANQA A+L +G VG DA G+ +
Sbjct: 1 MDLVTRAPRLPKGGETLIGDSFATVSGGKGANQAVAAARLGAQVSMIGCVGNDAYGEALR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+AL R+D V G +G A++++ QN+I+IV G N + E D V
Sbjct: 61 EAL--LVERIDCQAVSTVDG-SSGVALIVVDDSSQNAIVIVPGANGALTAEAIDRFD-SV 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++ A +++ Q E+PD+ K R G VI + + P+P + ID L PNESE
Sbjct: 117 IQAADVLICQLEVPDASVGHALKRGRELGKTVILNPAPVSRPLPSDWYASIDYLIPNESE 176
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVI 317
L+G+ DS E A +G +V++ LGA+GS LF +G++ + PA + +
Sbjct: 177 ASALSGLSVDSLETAQAAASCLIALGAGKVIITLGAQGS-LFTDGQR-FEHFPAPAVKAV 234
Query: 318 DTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
DTT AGDTF FA GK + +RF AA+L V GA PS+P
Sbjct: 235 DTTAAGDTFVGGFAAALAAGKDEAQAIRFGQVAAALSVTRAGAQPSIP 282
>gi|194016556|ref|ZP_03055170.1| ribokinase [Bacillus pumilus ATCC 7061]
gi|194012029|gb|EDW21597.1| ribokinase [Bacillus pumilus ATCC 7061]
Length = 292
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 158/308 (51%), Gaps = 30/308 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS + D+ V ++ P GETV ++ +T+ GGKGANQA A+L Y VG+VG+
Sbjct: 4 IVVVGSCSMDLVVTSNKRPNAGETVLGESFKTVPGGKGANQAVASARLGADVYMVGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ I L GVR YM V + T H ++ ++G NSI++V G N P+
Sbjct: 64 DAYGQDILSNLQDQGVRTSYMKPVTEMESGTAHIIL---AEGDNSIVVVKGANDEVTPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ E L + GIVL+Q+EIP+ V +PVI + AP + Q++L+
Sbjct: 120 YVREALSTIDDIGIVLIQQEIPEETVEAVCAICSEKEIPVILNP----APARKVSQQVLD 175
Query: 247 FIDILSPNESE-LGRLTGMP-TDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
++PNE E + G+P D+ Q ++L+ G G F
Sbjct: 176 QAAYITPNEHEAVLMFNGLPIEDALRQYP-----------NKLLITEGKNGVRYF----D 220
Query: 305 PIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+K+ ++P +DTTGAGDTF + AV EGKS + L FA AAS+ V GA
Sbjct: 221 GLKEVLVPGFPVEAVDTTGAGDTFNGALAVALTEGKSLYDALAFANLAASMSVTKFGAQG 280
Query: 363 SMPDRKSV 370
MP R+ +
Sbjct: 281 GMPTREEL 288
>gi|148254287|ref|YP_001238872.1| ribokinase [Bradyrhizobium sp. BTAi1]
gi|146406460|gb|ABQ34966.1| ribokinase [Bradyrhizobium sp. BTAi1]
Length = 302
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 160/311 (51%), Gaps = 18/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ +R P++GETVA + GGKGANQA AKL PT +G++G
Sbjct: 4 VVVAGSINMDVVATAERHPRIGETVAGHSVMYFPGGKGANQAVSAAKLGAPTSLIGRLGR 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKD-GGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
DA G+ + L+ G+ L VKD G TG A++ L + N+I+++ G N PE
Sbjct: 64 DAFGEQLRAFLASQGIDL---TAVKDSAGAATGTALITL-AKADNTIVVIPGANAEVSPE 119
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
L + + + Q EIP + + + AR+AG I + A L I
Sbjct: 120 DVAQVAL---TASDVAVSQFEIPQATIVAFFRQARAAGATTILNPAPASA-FDSALFALI 175
Query: 249 DILSPNESELGRLTGMP---TDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D+L NE+ELG LTG+ T + Q+S+AV Q V V LGA+G A+ V G K
Sbjct: 176 DVLVLNETELGFLTGIALGDTPTLPQVSDAVRALDPRDDQTVCVTLGARG-AVAVTGSKA 234
Query: 306 --IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
++ + A +DTTGAGD F + A +G + + +A AAS+ VQ GA PS
Sbjct: 235 RLVEGRAVTA---VDTTGAGDCFVGALAARLSQGAPIADAIGYANIAASISVQRMGAGPS 291
Query: 364 MPDRKSVLNLL 374
MP + V LL
Sbjct: 292 MPTAEEVGALL 302
>gi|118586514|ref|ZP_01543958.1| ribokinase [Oenococcus oeni ATCC BAA-1163]
gi|118433078|gb|EAV39800.1| ribokinase [Oenococcus oeni ATCC BAA-1163]
Length = 308
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 13/305 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++LP+ GET+ + GGKGANQA A+ F+G VG
Sbjct: 8 IVVLGSLNVDTIQHLNKLPERGETIHLNGLTSAPGGKGANQAVAAARQGADVSFIGAVGN 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + LS + + ++ K VPTG A +ML++DG N+I++ GG NM E
Sbjct: 68 DANGRFMKQTLSDNKIDVSHIVTKK---VPTGSAYIMLEADGNNTILVYGGANMQVSVED 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++ A ++ Q E P + ++ + A+ V I + P+ LL+ D
Sbjct: 125 VRAAS-SLIESADAIITQFETPVTAAVEAFEIAKRKDVLTILNPAPAQKIDPK-LLSISD 182
Query: 250 ILSPNESELGRLTGMPTD-SYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNESE L + E ++ A + K+GV+ L+ LG GS + G+ ++
Sbjct: 183 FVTPNESEAQVLIDQKVQFTKESLNNAALSFEKLGVKNTLITLGEHGS-FYKFGQ---QE 238
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
IIP+ +V +DTT AGDTF SF S + L +A ++SL VQ GA+PS+P
Sbjct: 239 GIIPSFKVKAVDTTAAGDTFIGSFTANLKPDLSNLTDALTWATRSSSLTVQKAGALPSIP 298
Query: 366 DRKSV 370
+ V
Sbjct: 299 TFEEV 303
>gi|406677126|ref|ZP_11084311.1| ribokinase [Aeromonas veronii AMC35]
gi|404625440|gb|EKB22257.1| ribokinase [Aeromonas veronii AMC35]
Length = 310
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 160/307 (52%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L P F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAPVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMKSGFAKDGI--DVSAVELDPKLPTGIAIIYVSDEGENSIGISAEANGAITPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + ++ A +LLQ E+P + A+ AR+ G V+ + P+ ELL ++
Sbjct: 122 VKNHE-AMIADAHTLLLQLEVPLESVHEAARLARAHGTRVVLNPAPAR-PLSSELLALVN 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ EA + H+MG+ V++ LG++G V +Q
Sbjct: 180 LITPNQTEAELLTGIKVTDEASAREAAARFHQMGIADVMITLGSQG----VYCSNAQQQQ 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVKAVDTTAAGDTFNGALLAAELAGADFHSAVRFAHGAAALSVTRFGAQSSIPSK 295
Query: 368 KSVLNLL 374
+ V L
Sbjct: 296 QEVDTFL 302
>gi|254469598|ref|ZP_05083003.1| ribokinase [Pseudovibrio sp. JE062]
gi|211961433|gb|EEA96628.1| ribokinase [Pseudovibrio sp. JE062]
Length = 305
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 161/315 (51%), Gaps = 24/315 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N DI DRLP+ GET+ + GGKG NQA +KL VG++G+
Sbjct: 3 IAIVGSINVDITTRSDRLPQPGETLHGHSYAINLGGKGCNQAVAASKLGGDAKLVGRIGK 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+ GV +++++ + G TG AV+ + ++ +NSII++GG N++
Sbjct: 63 DGFGDIAAQHLAEMGVSTEHVHLDETHG--TGIAVIGVDANSENSIIVIGGANLAVDESD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI---PQELLN 246
+ EV++ A I+L+Q EIP + AK R++G VIFD AP+ P+ L
Sbjct: 121 L-ERSAEVLETAKIMLMQLEIPVETCLSAAKKVRASGGKVIFDPA--PAPVHGLPEGFLQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG-------SALF 299
+D+++PNE+E LTG + E+ + A + GV +VKLGA+G S F
Sbjct: 178 NVDVVTPNETETEILTGFRPTNAEEAAHAANLLREQGVAAAVVKLGARGVYFKDETSEGF 237
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
VE P K IDT AGD F A GK+ E +RFAAA +L G
Sbjct: 238 VE---PFK------VNAIDTVAAGDCFNGGLAYALAGGKTLAEAVRFAAACGALSTTKHG 288
Query: 360 AIPSMPDRKSVLNLL 374
A S P V L+
Sbjct: 289 AATSAPTLAEVDALM 303
>gi|156977356|ref|YP_001448262.1| ribokinase [Vibrio harveyi ATCC BAA-1116]
gi|156528950|gb|ABU74035.1| hypothetical protein VIBHAR_06142 [Vibrio harveyi ATCC BAA-1116]
Length = 305
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 161/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLLQ 375
P RK V L+
Sbjct: 293 PTRKEVEEFLE 303
>gi|444425589|ref|ZP_21221027.1| ribokinase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241189|gb|ELU52717.1| ribokinase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 305
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 161/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTSEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVRVKDDDSAQEAANILHSKGIEIVMITLGAKGVLLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLLQ 375
P RK V L+
Sbjct: 293 PTRKEVEEFLE 303
>gi|352516646|ref|YP_004885963.1| ribokinase [Tetragenococcus halophilus NBRC 12172]
gi|348600753|dbj|BAK93799.1| ribokinase [Tetragenococcus halophilus NBRC 12172]
Length = 301
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 155/303 (51%), Gaps = 10/303 (3%)
Query: 71 VVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGED 130
+VGS N D + + R+ K GET+ K T AGGKGANQA A+ T F+G VG D
Sbjct: 5 TIVGSINLDTNLRVHRMVKPGETIHGKEHYTAAGGKGANQAVATARAGTNTSFIGAVGND 64
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
G+ + D L + + + ++++ PTG A + + +G+NSI+ G N + E+
Sbjct: 65 GPGEQMLDLLKEEKIDVSGIEIIQN--EPTGQAFIPIDDNGENSIMFYAGANYAFGTEEV 122
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
++ +++ V+ Q E P I+ + ARS V I + ++ +P++LL D+
Sbjct: 123 A-KNSSLIETNDFVIAQLETPIEATIKAFEIARSKNVKTILNPAPGESDLPEKLLKLTDM 181
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
+ PNE+E +TG+ + +A K H++GV+ V++ GAKG+ G +
Sbjct: 182 IIPNETEAETITGIEVNDETSAKKAAAKLHELGVEAVIITFGAKGAFYDFNG----YSEL 237
Query: 311 IPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPDR 367
+PA +V +DTT AGDTF + S E + A+S VQ GA PS+P +
Sbjct: 238 VPAFKVKAVDTTAAGDTFIGYMIATLEKDFSNLREAILHGNKASSATVQRFGAQPSIPFK 297
Query: 368 KSV 370
+
Sbjct: 298 NEI 300
>gi|119509402|ref|ZP_01628551.1| ribokinase [Nodularia spumigena CCY9414]
gi|119466016|gb|EAW46904.1| ribokinase [Nodularia spumigena CCY9414]
Length = 307
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 155/304 (50%), Gaps = 17/304 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ RLP GET+ + + GGKGANQA A+L PTY VG+VG
Sbjct: 3 IIVFGSINIDLVATTSRLPIAGETILGEDFFKIPGGKGANQAVALARLEIPTYMVGRVGA 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
+ G + L GV+ + N+ D V +G A++ + G+N I+++ G N +
Sbjct: 63 QSFGAELVHNLQLAGVQTE--NIFIDQTVSSGVAIITVDYAGENQIVVIPGAN-----GR 115
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
ED+E ++ A ++LQ EIP + AKAA+ A + VI D A +P EL
Sbjct: 116 VNQEDIERLSQLLPTATALILQLEIPIDAVVAAAKAAKDANIQVILDPAPAQANLPDELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+DI++PNE E G+L G P D+ E +A + GV+ +VKLGAKG+ E
Sbjct: 176 QLVDIITPNEVEAGQLVGFPVDNQESALKAAKVLLQRGVKCAIVKLGAKGAVCATAEET- 234
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+PA +DT AGD F A G S + + + +AA +L GA S
Sbjct: 235 ---FFVPAFPIHAVDTVAAGDAFNGGLAAALYTGLSLHQAIIWGSAAGALATTKMGAQTS 291
Query: 364 MPDR 367
+PD+
Sbjct: 292 LPDK 295
>gi|402815074|ref|ZP_10864667.1| ribokinase RbsK [Paenibacillus alvei DSM 29]
gi|402507445|gb|EJW17967.1| ribokinase RbsK [Paenibacillus alvei DSM 29]
Length = 306
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 173/317 (54%), Gaps = 25/317 (7%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + ++GS N D+ +P GETV ++ T+ GGKGANQA A+L F+G
Sbjct: 2 TQPKITIIGSLNMDLVTVTSTVPTQGETVTGQSFATMYGGKGANQAVACARLQADVSFIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG D G ++ D L+ G+ + + V+ D V +G A ++++ DG N II+V G N
Sbjct: 62 CVGNDTFGTMMLDNLTREGIHTEAVEVLHD--VSSGTASIIVK-DGDNRIIVVPGANALV 118
Query: 186 WPE---KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP--- 239
PE K+ D V++++ I++LQ EIP + A A VPVI + AP
Sbjct: 119 TPERVRKYAD----VIRQSDIIVLQLEIPLPSVRAAIEIAAEAHVPVILNP----APALE 170
Query: 240 IPQELLNFIDILSPNESELGRLTGMPT--DSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
+ ++LL+ + +++PNE EL L GM + ++++ S M + VL K GA+G A
Sbjct: 171 LDEQLLSLVTVITPNEHELAELLGMSSQGNTFDWQS----ALQTMPGKIVLTK-GAEG-A 224
Query: 298 LFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQV 357
+ + + V+DTTGAGDTF + AV EG++ E+ +RFAAAA +L V V
Sbjct: 225 YWSDANGELHHCPSHHVDVVDTTGAGDTFNGALAVMLAEGRTMEQAIRFAAAAGALSVTV 284
Query: 358 KGAIPSMPDRKSVLNLL 374
GA MP R+ +++ +
Sbjct: 285 LGAQGGMPTREQLMDWM 301
>gi|81427812|ref|YP_394811.1| ribokinase [Lactobacillus sakei subsp. sakei 23K]
gi|4959404|gb|AAD34338.1|AF115391_7 ribokinase RbsK [Lactobacillus sakei subsp. sakei 23K]
gi|78609453|emb|CAI54499.1| Ribokinase [Lactobacillus sakei subsp. sakei 23K]
Length = 302
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D + + R P+ GET+A GGKGANQA + T F+ +VG+
Sbjct: 4 VIVLGSTNVDTILNVQRFPQPGETLAMDGRAVAGGGKGANQAIAAVRSGAQTAFISKVGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
+ + D G+ +D++ + G TG A +M+ + GQNSI+I GG N E
Sbjct: 64 EGAADFMIDTFKKDGMNVDHVRCSETAG--TGQAYIMVDAHGQNSILIYGGANQDVTVED 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +K A ++ Q E+P I+ K AR+ GV I + IP ELL D
Sbjct: 122 VHEAET-AIKAADRIVAQFEVPIPAIIEAFKIARANGVQTILNPAPAIKNIPTELLAVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E +TG+ + K+G++ V++ +G+KGS P
Sbjct: 181 MIVPNETEAEIITGIKVTDEASMQANAEAMFKLGIKVVIITVGSKGSFY----ATPTATG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PA +V +DTT AGDTF + + ++ + E + +A A+S+ VQ KGA S+P
Sbjct: 237 FVPAFKVNAVDTTAAGDTFIGALSTKLELDYSNIEAAMTYANKASSIAVQTKGAQNSIPY 296
Query: 367 RKSV 370
K +
Sbjct: 297 EKDI 300
>gi|410085858|ref|ZP_11282573.1| Ribokinase [Morganella morganii SC01]
gi|421493168|ref|ZP_15940526.1| RBSK [Morganella morganii subsp. morganii KT]
gi|455737607|ref|YP_007503873.1| Ribokinase [Morganella morganii subsp. morganii KT]
gi|400192796|gb|EJO25934.1| RBSK [Morganella morganii subsp. morganii KT]
gi|409767803|gb|EKN51877.1| Ribokinase [Morganella morganii SC01]
gi|455419170|gb|AGG29500.1| Ribokinase [Morganella morganii subsp. morganii KT]
Length = 308
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 166/315 (52%), Gaps = 18/315 (5%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQA-ACGAKLSHPTYFV 124
T L V+GS N D + I + P GETV K QT GGKGANQA ACG + T F+
Sbjct: 2 TTSRLTVLGSINVDHIMNIAQFPAPGETVIGKQYQTAFGGKGANQAVACGRSGADIT-FI 60
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
VG+DA G I L + ++VV + TG A++ + DG+N I I G N +
Sbjct: 61 ACVGDDAIGVEILAQLQRDRIHTAAVSVVPEAA--TGVAMIFVNEDGENVIGISAGANAA 118
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IP 241
P F +V+++ +L+Q E P I A+AA++ VI + AP +P
Sbjct: 119 LTPAHFAPYK-GLVEQSDALLMQLESPLETVIAAAQAAKNHQTRVILNP----APARELP 173
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
LL +D+++PNE+E +LTG+ + A H G+ QVL+ LG++G L V
Sbjct: 174 DSLLKLVDVITPNETEAEKLTGISVSDETGAARAAQVLHDKGIGQVLITLGSRGVWLSVN 233
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
GE IP +V +DT AGDTF ++ +EGK +E +RFA AAA++ V +G
Sbjct: 234 GEG----RRIPGFKVNAVDTIAAGDTFNGAYVTALLEGKPADEAVRFAHAAAAIAVTRRG 289
Query: 360 AIPSMPDRKSVLNLL 374
A PS+P R+ + L
Sbjct: 290 AQPSVPWRREIDAFL 304
>gi|421187033|ref|ZP_15644413.1| ribokinase family sugar kinase [Oenococcus oeni AWRIB418]
gi|399964740|gb|EJN99375.1| ribokinase family sugar kinase [Oenococcus oeni AWRIB418]
Length = 313
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 13/305 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++LP+ GET+ + GGKGANQA A+ F+G VG
Sbjct: 13 IVVLGSLNVDTIQHLNKLPERGETIHLNGLTSAPGGKGANQAVAAARQGADVSFIGAVGN 72
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + LS + + ++ K VPTG A +ML++DG N+I++ GG NM E
Sbjct: 73 DANGRFMKQTLSDNKIDVSHIVTKK---VPTGSAYIMLEADGNNTILVYGGANMQVSVED 129
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++ A ++ Q E P + ++ + A+ V I + P+ LL+ D
Sbjct: 130 VRAAS-SLIESADAIITQFETPVTAAVEAFEIAKRKDVLTILNPAPAQKIDPK-LLSISD 187
Query: 250 ILSPNESELGRLTGMPTD-SYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNESE L + E ++ A + K+GV+ L+ LG GS + G+ ++
Sbjct: 188 FVTPNESEAQVLIDQKVQFTKESLNNAALSFEKLGVKNTLITLGEHGS-FYKFGQ---QE 243
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
IIP+ +V +DTT AGDTF SF S + L +A ++SL VQ GA+PS+P
Sbjct: 244 GIIPSFKVKAVDTTAAGDTFIGSFTANLKPDLSNLTDALTWATRSSSLTVQKAGALPSIP 303
Query: 366 DRKSV 370
+ V
Sbjct: 304 TFEEV 308
>gi|28900938|ref|NP_800593.1| ribokinase [Vibrio parahaemolyticus RIMD 2210633]
gi|153836675|ref|ZP_01989342.1| ribokinase [Vibrio parahaemolyticus AQ3810]
gi|260366152|ref|ZP_05778612.1| ribokinase [Vibrio parahaemolyticus K5030]
gi|260879794|ref|ZP_05892149.1| ribokinase [Vibrio parahaemolyticus AN-5034]
gi|260894468|ref|ZP_05902964.1| ribokinase [Vibrio parahaemolyticus Peru-466]
gi|260903004|ref|ZP_05911399.1| ribokinase [Vibrio parahaemolyticus AQ4037]
gi|417322687|ref|ZP_12109221.1| ribokinase [Vibrio parahaemolyticus 10329]
gi|28809384|dbj|BAC62426.1| ribokinase [Vibrio parahaemolyticus RIMD 2210633]
gi|149750024|gb|EDM60769.1| ribokinase [Vibrio parahaemolyticus AQ3810]
gi|308086389|gb|EFO36084.1| ribokinase [Vibrio parahaemolyticus Peru-466]
gi|308092018|gb|EFO41713.1| ribokinase [Vibrio parahaemolyticus AN-5034]
gi|308108399|gb|EFO45939.1| ribokinase [Vibrio parahaemolyticus AQ4037]
gi|308114742|gb|EFO52282.1| ribokinase [Vibrio parahaemolyticus K5030]
gi|328470841|gb|EGF41752.1| ribokinase [Vibrio parahaemolyticus 10329]
Length = 305
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 159/306 (51%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DIAGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLTSEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARVAKDAKTNVILNP----APARELSDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ E EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDNESAQEAANVLHGKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF +F G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGAFVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV 370
P R+ V
Sbjct: 293 PTREEV 298
>gi|350533552|ref|ZP_08912493.1| ribokinase [Vibrio rotiferianus DAT722]
Length = 305
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 162/311 (52%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLTADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DL+ +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLDRIRQAEYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF +F G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGAFVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLLQ 375
P R+ V L+
Sbjct: 293 PTRQEVEEFLE 303
>gi|422298288|ref|ZP_16385898.1| ribo kinase [Pseudomonas avellanae BPIC 631]
gi|407990073|gb|EKG32247.1| ribo kinase [Pseudomonas avellanae BPIC 631]
Length = 306
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 155/306 (50%), Gaps = 9/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 VVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL R+D V GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGQQLRAAL--LVERIDCQAVTVVEGVSTGIASIVVDANSQNAIVIVAGGNGRLTPAL 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + IV+ Q E+P AR+ G VI + P+P ID
Sbjct: 123 IERFD-ALLAGSEIVICQLEVPTETVFHTLSRARALGKTVILNPAPASEPLPASWYGLID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE LTG+ DS +A G + V++ LG +G+ LF
Sbjct: 182 YLIPNESEAQTLTGVTVDSSAAAEQAATAMLAAGARNVIITLGERGT-LFANAAGVEH-- 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA RV +DTT AGDTF FA G+ + +RF AAA++ V GA PS+P
Sbjct: 239 -IPARRVQAVDTTAAGDTFVGGFAAALAAGQGESQAIRFGQAAAAISVTRAGAQPSIPTF 297
Query: 368 KSVLNL 373
+ V L
Sbjct: 298 EEVQEL 303
>gi|226329100|ref|ZP_03804618.1| hypothetical protein PROPEN_03003 [Proteus penneri ATCC 35198]
gi|225202286|gb|EEG84640.1| ribokinase [Proteus penneri ATCC 35198]
Length = 308
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 166/312 (53%), Gaps = 12/312 (3%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQA-ACGAKLSHPTYFV 124
T P L V+GS N D + I + PK GET+ + GGKGANQA ACG + T F+
Sbjct: 2 TTPRLAVLGSINVDHIMNISQFPKPGETIIGHQYKIAFGGKGANQAVACGRSGADIT-FI 60
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
VG+DA G I L+ + +D ++++ PTG A++++ G+N I I+ G N +
Sbjct: 61 ACVGDDAIGSEIISQLNTDNIHIDAISIIPQ--TPTGVAMILVNEQGENVISIIAGANGA 118
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
P ++ V++ A +L+Q E P + AK A+S VI + + E
Sbjct: 119 LTPIHL-EQYHHVIEHADALLMQLESPLETVFEAAKLAKSHQTKVILNPAPAQT-LSDEF 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+FID+++PNE+E LTG+ ++A H+ G++QVL+ LG++G +G
Sbjct: 177 LSFIDVITPNETEAEILTGVSVHDEAGAAKAADILHRKGIKQVLITLGSRGVWFSEQG-- 234
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
K IIP RV +DT AGDTF +F +EGK E + FA AAA++ V GA
Sbjct: 235 --KGMIIPGFRVDAVDTIAAGDTFNGAFVTAILEGKPSVEAICFAHAAAAIAVTRHGAQS 292
Query: 363 SMPDRKSVLNLL 374
S+P R + + L
Sbjct: 293 SVPWRHEIESFL 304
>gi|298480119|ref|ZP_06998318.1| ribokinase [Bacteroides sp. D22]
gi|336404346|ref|ZP_08585044.1| ribokinase [Bacteroides sp. 1_1_30]
gi|295085520|emb|CBK67043.1| ribokinase [Bacteroides xylanisolvens XB1A]
gi|298273928|gb|EFI15490.1| ribokinase [Bacteroides sp. D22]
gi|335943674|gb|EGN05513.1| ribokinase [Bacteroides sp. 1_1_30]
Length = 304
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 10/310 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
++T +VV+GS+N D+ ++ DRLPK GET+ GGKGANQA A+L F
Sbjct: 1 MDTKKKIVVIGSSNTDMVIKSDRLPKPGETILGGNFLMNHGGKGANQAVAAARLGGDVTF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ ++G D G + + Y+ + P+G A++ + G+N I++ G N
Sbjct: 61 ICKIGNDIFGNETLEMFHKEKIDTTYVGITPQE--PSGVALINVDKKGENCIVVASGANG 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQ 242
+ + + +K+A IV++Q E P AK A+ G+ VI + A +P
Sbjct: 119 TLSIDDIQHAE-PAIKQASIVIMQLETPIESVTYAAKMAKKDGITVILNPAPAPTQQLPD 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL +DIL PN +E ++GM E EA+ G++ V++ +GAKG AL E
Sbjct: 178 ELLANVDILIPNVTEAEIISGMHITDDESAKEAIRYISSKGIKTVIITMGAKG-ALAYEN 236
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+ I IPA +V +DTT AGDTF V EGK+ ++ + FA+ A+S+ V GA
Sbjct: 237 NEFIH---IPAFKVEAVDTTAAGDTFCGGLCVALSEGKNLKDAIIFASKASSISVTRMGA 293
Query: 361 IPSMPDRKSV 370
S+P RK +
Sbjct: 294 QVSIPLRKEI 303
>gi|229493172|ref|ZP_04386964.1| ribokinase [Rhodococcus erythropolis SK121]
gi|229319903|gb|EEN85732.1| ribokinase [Rhodococcus erythropolis SK121]
Length = 293
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 158/307 (51%), Gaps = 26/307 (8%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VVVGS N D+ + R P GET+ T AGGKG+NQA AK FVG V
Sbjct: 4 PRIVVVGSINMDLTTSVSRFPAPGETLLGTAFATAAGGKGSNQAIAAAKAGGDVSFVGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D G + + L GV + V DG P+G A + + D +N+II+V G N S
Sbjct: 64 GDDGFGTQLRETLQDAGVDTALLRSV-DG--PSGVAAITVSEDAENNIIVVPGANSSV-- 118
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ DL+ + A ++L Q EIP A+ A + G VI + + +P L++
Sbjct: 119 TSLSEADLDAIAHADVLLCQLEIPVETVRAAAEHAHANGTTVILNPSPVQ-ELPDPLIDA 177
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+DIL N++E EQ++ + V+ ++ LGA G+ L GE+ I
Sbjct: 178 VDILIVNQTE-----------SEQLAAVTGR-----VRYLVTTLGAGGADLR-SGEETIH 220
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
PA +DTTGAGD FT +FAV +V+G+ R L+FAA A SL V+GA S P R
Sbjct: 221 AD-SPAVTPVDTTGAGDAFTGAFAVEWVQGQDR--ALQFAATAGSLATTVRGASVSSPTR 277
Query: 368 KSVLNLL 374
++ +L
Sbjct: 278 AAIEKVL 284
>gi|219117429|ref|XP_002179509.1| ribokinase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409400|gb|EEC49332.1| ribokinase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 709
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 165/331 (49%), Gaps = 30/331 (9%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQ----TLAGGKGANQAACGAKLSHPT- 121
P +VV+GS N D ++ +DR+P GE + + + GGKG QA +KL P
Sbjct: 30 PHRIVVIGSINADTFLPVDRIPIEGENLTLLPGKLPVVDVPGGKGCTQAVAASKLLAPVG 89
Query: 122 ---YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIV 178
FVGQ G D +++ +L V + + + ++ +P+G V + GQ S ++
Sbjct: 90 GSVSFVGQFGNDVAAQILQQSLVDAHVDVTFCSHHEN--IPSGRGYVFHTTSGQVSAVVS 147
Query: 179 GGTNMSCWPE-----KFGDEDL----------EVVKKAGIVLLQREIPDSVNIQVAK-AA 222
GG+N W E + ++D ++++ +V+LQ E+P+ VN VA+ AA
Sbjct: 148 GGSNELGWLEWEHAWEIYNKDRNQILLQGKIDKLLQDCRLVMLQCEVPEYVNRLVARCAA 207
Query: 223 RSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLT---GMPTDSYEQISEAVVKC 279
+ + V+ D GG D + +E L D L PNESEL RL G P + + I
Sbjct: 208 QRGNILVVQDVGGEDRGMNEEHLRHCDYLMPNESELRRLVRSFGGPENDSD-IETMAKFL 266
Query: 280 HKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKS 339
G + +LV G+KGS L + I Q I V+D TGAGD + A+F E KS
Sbjct: 267 QARGARNILVTQGSKGSTLVADDGTVIHQPAITIEEVLDETGAGDCYRAAFCTALCEDKS 326
Query: 340 REECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
++C+ +A AA + V+ GA+PS P R V
Sbjct: 327 LQQCMEWATAAGACSVERLGAVPSTPTRGQV 357
>gi|315646233|ref|ZP_07899353.1| ribokinase [Paenibacillus vortex V453]
gi|315278432|gb|EFU41748.1| ribokinase [Paenibacillus vortex V453]
Length = 292
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 160/303 (52%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GSA+ D+ V + P GETV + +T+ GGKGANQA A+L VG VG+
Sbjct: 4 IVVIGSASMDLVVTAAKRPGAGETVLGDSFKTVPGGKGANQAVACARLGAEVTMVGCVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK I + L GV DY+ V G+ +G A ++L ++G NSI++V N P
Sbjct: 64 DSFGKTILNNLQSNGVVTDYVEPVT--GIESGTAHIIL-AEGDNSIVVVKAANDRITP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D+ V+K + IVL+Q+EIP+ + V++ VP++ + P+P ++
Sbjct: 120 YVDQAAAVIKASDIVLIQQEIPEETVVHVSEICAKYHVPLMLNPAPAR-PVPSRVIEQAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE E L G E + + +++V G G F +G + +
Sbjct: 179 YITPNEHEAAILFG---------DEPLSDVLRRYPNKLIVTEGKNGVRYF-DGSQEV--- 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++P +V +DTTGAGDTF SFAV EG S + LRFA AASL V GA MP R
Sbjct: 226 VVPGYQVEAVDTTGAGDTFNGSFAVALAEGMSITDSLRFANRAASLSVMKFGAQGGMPTR 285
Query: 368 KSV 370
V
Sbjct: 286 DEV 288
>gi|424765909|ref|ZP_18193276.1| ribokinase [Enterococcus faecium TX1337RF]
gi|402413015|gb|EJV45365.1| ribokinase [Enterococcus faecium TX1337RF]
Length = 307
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + ++PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTKMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIEGAATGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVRKNKELITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ ++ + A K H++G+ V++ LG+ G+ F EK +Q
Sbjct: 181 IIIPNETETEIITGIRVTDHDSLVAAAEKMHELGIGTVIITLGSTGA--FYHTEK--EQG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V IDTT AGDTF + + + + +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAIDTTAAGDTFIGALSSTLQPDLGNLKESILYGNLASSIAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|330818946|ref|YP_004385925.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
gi|329130082|gb|AEB74634.1| ribokinase [Lactobacillus buchneri NRRL B-30929]
Length = 308
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 157/312 (50%), Gaps = 19/312 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D I R P+ GETV + AGGKGANQA A+ T F+GQ+G+
Sbjct: 4 ITVLGSLNVDTTFRIKRFPEPGETVQVHEKTSAAGGKGANQAVAAARSGAKTAFIGQIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + +L + Y++ + G TG A +ML +GQN I++ GG N +K
Sbjct: 64 DGAGKFMLQSLENDNIDGSYVSTSESVG--TGTANIMLDENGQNCILVYGGAN-----QK 116
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQEL 244
D++ V+K + V+ Q E P + A++ GV + + A I EL
Sbjct: 117 LTVADVKKAEPVIKNSDFVVAQFETPQDAATAAFQIAKANGVTTVLNPAPAPSTSISTEL 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L DI++PNE E +TG+ + + + K MG+ +++ +G KG+ + ++
Sbjct: 177 LKLTDIIAPNELESASITGIKITNEDSMIATADKFSNMGINNLIITVGDKGAFYSTQSDR 236
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAI 361
+IPA +V +DTT AGDTF +F S + + FA A+SL VQ GA
Sbjct: 237 ----ELIPAFKVKAVDTTAAGDTFIGAFVSQLKPDFSNIKSAVTFAQHASSLTVQRLGAQ 292
Query: 362 PSMPDRKSVLNL 373
PS+P +L +
Sbjct: 293 PSIPKLDEILKV 304
>gi|227551093|ref|ZP_03981142.1| ribokinase [Enterococcus faecium TX1330]
gi|257888967|ref|ZP_05668620.1| carbohydrate kinase [Enterococcus faecium 1,141,733]
gi|257893849|ref|ZP_05673502.1| carbohydrate kinase [Enterococcus faecium 1,231,408]
gi|257896715|ref|ZP_05676368.1| carbohydrate kinase [Enterococcus faecium Com12]
gi|293378633|ref|ZP_06624793.1| ribokinase [Enterococcus faecium PC4.1]
gi|430847667|ref|ZP_19465503.1| ribokinase [Enterococcus faecium E1133]
gi|431039321|ref|ZP_19492556.1| ribokinase [Enterococcus faecium E1590]
gi|431757564|ref|ZP_19546193.1| ribokinase [Enterococcus faecium E3083]
gi|431762837|ref|ZP_19551393.1| ribokinase [Enterococcus faecium E3548]
gi|227179791|gb|EEI60763.1| ribokinase [Enterococcus faecium TX1330]
gi|257825023|gb|EEV51953.1| carbohydrate kinase [Enterococcus faecium 1,141,733]
gi|257830228|gb|EEV56835.1| carbohydrate kinase [Enterococcus faecium 1,231,408]
gi|257833280|gb|EEV59701.1| carbohydrate kinase [Enterococcus faecium Com12]
gi|292642764|gb|EFF60914.1| ribokinase [Enterococcus faecium PC4.1]
gi|430536985|gb|ELA77345.1| ribokinase [Enterococcus faecium E1133]
gi|430562266|gb|ELB01512.1| ribokinase [Enterococcus faecium E1590]
gi|430618069|gb|ELB54916.1| ribokinase [Enterococcus faecium E3083]
gi|430623035|gb|ELB59736.1| ribokinase [Enterococcus faecium E3548]
Length = 307
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + ++PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTKMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIEGAATGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVRKNKELITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ ++ + A K H++G+ V++ LG+ G+ F EK +Q
Sbjct: 181 IIIPNETETEIITGIRVTDHDSLVAAAEKMHELGIGTVIITLGSTGA--FYHTEK--EQG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V IDTT AGDTF + + + + +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAIDTTAAGDTFIGALSSTLQPDLGNLKEAILYGNLASSIAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|418022557|ref|ZP_12661543.1| ribokinase [Shewanella baltica OS625]
gi|353537559|gb|EHC07115.1| ribokinase [Shewanella baltica OS625]
Length = 307
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 157/297 (52%), Gaps = 8/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D V++ P+ GET+ A Q +AGGKGANQA A+L F+ VG+
Sbjct: 4 LVVLGSVNADHVVQVPSFPRPGETLTASGYQVIAGGKGANQAVAAARLGADVAFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + G+ + + +V D + TG A++ + G+NSI I G N + P
Sbjct: 64 DDFGLRVYKEYQALGMDISGLMIVSD--MTTGVAMIQVADSGENSICIAPGANAALTPAL 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
++ KA I+L+Q E P A A+ A V+ + A M+ + ELL +
Sbjct: 122 LAPHQ-HLISKADILLMQLETPLETIFSAATMAKDADTLVVLNPAPAME--LADELLAKV 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI++PNE+E LTG+ DS + + A H G+ V++ LG+KG ++V + +Q
Sbjct: 179 DIITPNETEAELLTGIKVDSIDSAALAAAHLHAKGIATVMITLGSKG--VYVSEQGQGRQ 236
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ +V DTT AGDTF A G ++GK+ E + FA AA++ V GA S+P
Sbjct: 237 IAGFSVQVKDTTAAGDTFNAGVLTGLLQGKTLNEAIVFAHGAAAISVSRFGAQTSIP 293
>gi|73662053|ref|YP_300834.1| ribokinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|72494568|dbj|BAE17889.1| ribokinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
Length = 287
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 162/311 (52%), Gaps = 38/311 (12%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GSA+ D+ V+ D LP+ GETV + T GGKGANQA A+LS+ Y +G VG+
Sbjct: 4 IIVIGSASIDLVVKTDILPEAGETVMGTSFFTNPGGKGANQAVAAARLSNEVYMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA GK I + L V YM+++ + T H + + + D N II+V N P
Sbjct: 64 DAYGKQILENLKDNHVDTTYMDIIDNEKSGTAH-ITLFEDD--NRIIVVPAANNYITPDI 120
Query: 188 -----EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP--- 239
E FG++D I+LLQ EI ++ V A G+ VI + AP
Sbjct: 121 VLPKLENFGEDD--------IILLQHEILEATVQSVVTYAAKHGIKVILNP----APYRE 168
Query: 240 IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF 299
+ +E++ + ++PNESE L ++ E +K + +++++ GAKG+ +
Sbjct: 169 LDKEVIEKVTWITPNESESELL-------FDHQVEQALKAYP---RKLIITQGAKGALFY 218
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
+ ++ I+ VIDTTGAGDTF + AV +E KS E+ + FA A S V G
Sbjct: 219 SDTQQLIEGY---KKEVIDTTGAGDTFNGALAVALIENKSLEDAVNFANLAGSFSVTGLG 275
Query: 360 AIPSMPDRKSV 370
A +MP RK +
Sbjct: 276 AQGAMPYRKDL 286
>gi|431590378|ref|ZP_19521225.1| ribokinase [Enterococcus faecium E1861]
gi|431740995|ref|ZP_19529904.1| ribokinase [Enterococcus faecium E2039]
gi|431752696|ref|ZP_19541376.1| ribokinase [Enterococcus faecium E2620]
gi|430592298|gb|ELB30314.1| ribokinase [Enterococcus faecium E1861]
gi|430602630|gb|ELB40194.1| ribokinase [Enterococcus faecium E2039]
gi|430613155|gb|ELB50172.1| ribokinase [Enterococcus faecium E2620]
Length = 307
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + ++PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTKMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIEGAATGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVRKNKELITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ ++ + A K H++G+ V++ LG+ G+ F EK +Q
Sbjct: 181 IIIPNETETEIITGIRVTDHDSLVAAAEKMHELGIGTVIITLGSAGA--FYHTEK--EQG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V IDTT AGDTF + + + + +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAIDTTAAGDTFIGALSSTLQPDLGNLKEAILYGNLASSIAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|294793242|ref|ZP_06758388.1| ribokinase [Veillonella sp. 6_1_27]
gi|294456187|gb|EFG24551.1| ribokinase [Veillonella sp. 6_1_27]
Length = 295
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +GE
Sbjct: 4 IVVIGSCNMDIVVLADKRPTAGETIMGNELHIAHGGKGANQAVAAARLGAEVTMVGCIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G++I D L + DY+ V + T H + ++G NSII++ G N + +
Sbjct: 64 DAYGQMILDNLKENFINTDYIVTVPNTTTGTAHITL---AEGDNSIIVIAGAN-AMVDQS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 VVDNAWSAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPA-ADLDSEWLELAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P S E+ A +++V LG+KG GE
Sbjct: 179 YITPNEHELSAL--YPNQSTEETLLA-------NENKIIVTLGSKGVGYADNGEI----H 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 226 IVPGFKVEPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTK 285
Query: 368 KSVLNLL 374
V L
Sbjct: 286 DEVTAFL 292
>gi|270294343|ref|ZP_06200545.1| ribokinase [Bacteroides sp. D20]
gi|423305428|ref|ZP_17283427.1| ribokinase [Bacteroides uniformis CL03T00C23]
gi|423311247|ref|ZP_17289216.1| ribokinase [Bacteroides uniformis CL03T12C37]
gi|270275810|gb|EFA21670.1| ribokinase [Bacteroides sp. D20]
gi|392679779|gb|EIY73158.1| ribokinase [Bacteroides uniformis CL03T12C37]
gi|392681418|gb|EIY74777.1| ribokinase [Bacteroides uniformis CL03T00C23]
Length = 304
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 163/311 (52%), Gaps = 26/311 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ V LP GET+ GGKGANQA +L FV +VG
Sbjct: 4 IIVVGSSNTDMVVHTSHLPAPGETILGGKFLMNQGGKGANQAVAVKRLGGDLLFVARVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ G+ Y+ + D P+G A++ + +N I++ G NM
Sbjct: 64 DVLGQQTLRVFQNEGIETSYIAL--DNETPSGVALISVDQYAENCIVVASGANM-----L 116
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
G ED++ ++K I+L+Q EIP S A+ A GV V+ + AP +P+
Sbjct: 117 LGQEDIDSMEKEMLVGDILLMQLEIPLSTVEYAARKAYEKGVKVVLNP----APACSLPE 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-E 301
L ++ +++PN E LTG+ +S E ++ A ++ GV+ +++ LG++GS FV E
Sbjct: 173 SLFQYLYMITPNRIEAEMLTGVKINSKEDVAMAAGVLYRKGVKNIIITLGSEGS--FVRE 230
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
GEK + A +V +DTT AGDTF + VG EG S E+ + FA+ A+S+ V G
Sbjct: 231 GEKTY---YVDAYKVVPVDTTAAGDTFNGAVCVGVSEGMSLEQAVLFASKASSISVTRMG 287
Query: 360 AIPSMPDRKSV 370
A S+P RK +
Sbjct: 288 AQSSIPYRKEL 298
>gi|295676728|ref|YP_003605252.1| ribokinase [Burkholderia sp. CCGE1002]
gi|295436571|gb|ADG15741.1| ribokinase [Burkholderia sp. CCGE1002]
Length = 309
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 148/301 (49%), Gaps = 5/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP+ GET+A + +AGGKG NQA A+L +G VG
Sbjct: 10 VTVVGSLNMDLVVRSPRLPQPGETLAGRGFAQVAGGKGGNQAVAAARLGAQVSMLGCVGA 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG + L R+D ++ G P+G A++++ QN+I+IV G+N P
Sbjct: 70 DANGAQLRAGLE--AERIDCA-ALETGSEPSGVALIVVDDASQNTIVIVAGSNGELTPAA 126
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +V+ Q E P AAR G VI + +P + L ID
Sbjct: 127 VARHE-GTLAAAEVVICQLETPPESVYAALAAARRLGKIVILNPAPATGALPADWLPLID 185
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E L+G+ DS E + A G + VLV LGA+G +EG
Sbjct: 186 YLIPNELEAAALSGVAVDSPEDAARAAAALRAAGARNVLVTLGARGVHAALEGAAATLYD 245
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P +DTT AGDTF FA +G S E +RFA AA+L V GA PS+P R
Sbjct: 246 -APRVEAVDTTAAGDTFIGGFAAQLAQGASVEAAIRFAQRAAALSVTRAGAQPSIPTRAE 304
Query: 370 V 370
V
Sbjct: 305 V 305
>gi|398807729|ref|ZP_10566603.1| ribokinase [Variovorax sp. CF313]
gi|398088976|gb|EJL79515.1| ribokinase [Variovorax sp. CF313]
Length = 321
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ + + P GET+ + T+ GGKGANQA A+ +G VG
Sbjct: 16 IVVLGSLNMDLVLRVPHAPAAGETLLGHSIATIPGGKGANQAVSCAREGGQVQMIGCVGG 75
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + +AL G+ + V D PTG A+++++ GQN I+++ G N ++
Sbjct: 76 DAHGTALRNALQNDGIDTAALRTVAD--EPTGTALILVEDSGQNRIVMIPGANARVEVDE 133
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKA---ARSAGVPVIFDAGGMDAPIPQELLN 246
+ + V+ A ++ Q E P QVA+A A AG V+ + + A I + L
Sbjct: 134 AALK--QQVQGAAFLVTQFETPMD---QVARAIAVAHGAGCKVLLNPSPVQA-IAEPLWP 187
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L NE E L G DS ++ ++A G+ +V+V LG++G A+ V+ +
Sbjct: 188 LIDTLVVNEIEAQTLCGQSADSPQEAAQAGQALRAKGIARVVVTLGSRG-AVAVDADG-A 245
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P + +DTT AGDTF + AV EG S +E +R AA+LC+Q GA PS+P
Sbjct: 246 RHHPAPKVQAVDTTAAGDTFLGALAVALGEGHSFDEAVRLGIRAAALCIQQPGAQPSIPQ 305
Query: 367 RKSVLN 372
R +VL
Sbjct: 306 RDAVLR 311
>gi|422657552|ref|ZP_16719992.1| ribokinase [Pseudomonas syringae pv. lachrymans str. M302278]
gi|331016146|gb|EGH96202.1| ribokinase [Pseudomonas syringae pv. lachrymans str. M302278]
Length = 306
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 155/306 (50%), Gaps = 9/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 VVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL R+D V GV +G A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGQQLRAAL--LAERIDCQAVTVVEGVSSGIASIVVDANSQNAIVIVAGGNGRLTPAL 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + IV+ Q E+P AR+ G VI + P+P ID
Sbjct: 123 IERFD-ALLAGSEIVICQLEVPTETVFHTLSRARALGKTVILNPAPASEPLPASWYGLID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE LTG+ DS +A G + V++ LG +G+ LF
Sbjct: 182 YLIPNESEAQTLTGVNVDSAASAEQAATAMLAAGARNVIITLGERGT-LFANAAGVEH-- 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA RV +DTT AGDTF FA G+ + +RF AAA++ V GA PS+P
Sbjct: 239 -IPARRVQAVDTTAAGDTFVGGFAAALAAGQGESQAIRFGQAAAAISVTRAGAQPSIPTF 297
Query: 368 KSVLNL 373
+ V L
Sbjct: 298 EEVQEL 303
>gi|399517289|ref|ZP_10758842.1| Ribokinase [Leuconostoc pseudomesenteroides 4882]
gi|398647787|emb|CCJ66869.1| Ribokinase [Leuconostoc pseudomesenteroides 4882]
Length = 308
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 165/308 (53%), Gaps = 28/308 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS D+ ++RLP GETV A + + GGKGANQA ++L + VG
Sbjct: 7 VLVIGSNVMDLISYVERLPHKGETVEAPSFEMGFGGKGANQAVAASRLGARVAMLTCVGN 66
Query: 130 DANGKLITDALSGCGVRLDYM-NVVKDGGVPTGH-----AVVMLQSDGQNSIIIVGGTNM 183
D G R +++ N + GV TG+ A + ++S+G N I+IV G N
Sbjct: 67 DG---------FGVKTRANFVANHIDISGVLTGNQSNGVAPIFVESNGDNRILIVQGANT 117
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---I 240
PE D+ ++++K+A +++LQ+EIP NI+ A+ +P+I++ AP +
Sbjct: 118 ELTPEVLLDK-IDLIKQAKVIVLQQEIPMPTNIKAIHLAKKYNIPIIYNP----APAHKL 172
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
P ++L +D L PNESEL +T MP + ++ A + GV V+V +G +G+
Sbjct: 173 PLDVLQMVDYLIPNESELTAITNMPVSTVQETKSAARRLLSFGVANVIVTMGERGALWMT 232
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
G+ K++++ V IDTTGAGD F +FA F +G+S + + A A A+L V +
Sbjct: 233 AGQ---KETLVDGQNVNAIDTTGAGDAFVGAFAHYFAQGQSLDAAIAQANANAALSVMAR 289
Query: 359 GAIPSMPD 366
G S P+
Sbjct: 290 GTQKSYPN 297
>gi|330718997|ref|ZP_08313597.1| ribokinase family sugar kinase [Leuconostoc fallax KCTC 3537]
Length = 311
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI ++ RLP+ GET+ + GGKGANQA + +G +G+
Sbjct: 4 VVVIGSLNIDIVQKVPRLPRQGETLGVTDQSSNFGGKGANQAIAAQRQGSQVAMIGAIGD 63
Query: 130 DANG----KLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
D G +L+TD ++D + TG A +ML+ DG N+I++ GG NMS
Sbjct: 64 DDRGLAFRQLMTDE------KMDDRYITTKAP-HTGSATIMLEPDGHNTILVHGGANMSL 116
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
E + V+ +A +V+ Q E+P + K A+ GV I + + I Q ++
Sbjct: 117 TREDVRRAE-SVIAEADVVVAQLEVPREAIEEGFKIAKQHGVTTILNPAPVTHYIEQAII 175
Query: 246 NFIDILSPNESELGRLTGMP-TDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
+ D++ PNE+E L G+P T +++ + + H G + ++V LGA G V+ ++
Sbjct: 176 DHTDLVVPNETEAAALAGVPATTDRKELEQVIDILHDKGFKDIVVTLGADGVYYDVKQQQ 235
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I IIP A+V+DTT AGDTF S A + S E L A AA+S+ V GAI ++
Sbjct: 236 GIV-PIIP-AKVVDTTAAGDTFIGSLAANWSSDLSIEALLTRATAASSIVVARPGAIAAI 293
Query: 365 PDRKSVLNLL 374
P ++ V LL
Sbjct: 294 PLKREVDALL 303
>gi|430842148|ref|ZP_19460063.1| ribokinase [Enterococcus faecium E1007]
gi|430493229|gb|ELA69532.1| ribokinase [Enterococcus faecium E1007]
Length = 307
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 164/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + ++PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTKMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIEGAATGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++ + ++ Q E I A++AG I + IP ELL D
Sbjct: 121 EVRKNKELITNSDFIIAQFESSLDATILAFSIAKNAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ ++ + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHDSLVAAAEKMHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + + + +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLLPDLGNLKEAILYGNLASSIAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|424043165|ref|ZP_17780805.1| ribokinase [Vibrio cholerae HENC-03]
gi|408889469|gb|EKM27886.1| ribokinase [Vibrio cholerae HENC-03]
Length = 305
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 160/310 (51%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKGAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLL 374
P RK V L
Sbjct: 293 PTRKEVEEFL 302
>gi|160884074|ref|ZP_02065077.1| hypothetical protein BACOVA_02050 [Bacteroides ovatus ATCC 8483]
gi|423291466|ref|ZP_17270314.1| ribokinase [Bacteroides ovatus CL02T12C04]
gi|156110416|gb|EDO12161.1| ribokinase [Bacteroides ovatus ATCC 8483]
gi|392663466|gb|EIY57016.1| ribokinase [Bacteroides ovatus CL02T12C04]
Length = 304
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 10/310 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
++T +VV+GS+N D+ ++ DRLPK GET+ GGKGANQA A+L F
Sbjct: 1 MDTKKKIVVIGSSNTDMVIKSDRLPKPGETILGGNFLMNHGGKGANQAVAAARLGGDVTF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ ++G D G + + Y+ + P+G A++ + G+N I++ G N
Sbjct: 61 ICKIGNDIFGNETLEMFHKEKIDTTYVGITPQE--PSGVALINVDKKGENCIVVASGANG 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQ 242
+ + + + +K+A IV++Q E P AK A+ G+ VI + A +P
Sbjct: 119 TLSIDDIQNAE-PAIKQASIVIMQLETPIESVTYAAKMAKKDGITVILNPAPAPTQQLPD 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
+LL +DIL PN +E ++GM E EA+ G++ V++ +GAKG AL E
Sbjct: 178 DLLANVDILIPNVTEAEIISGMHITDDESAKEAIRYISSKGIKTVIITMGAKG-ALAYEN 236
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+ I IPA +V +DTT AGDTF V EGK+ ++ + FA+ A+S+ V GA
Sbjct: 237 NEFIH---IPAFKVEAVDTTAAGDTFCGGLCVALSEGKNLKDAIIFASKASSISVTRMGA 293
Query: 361 IPSMPDRKSV 370
S+P RK +
Sbjct: 294 QVSIPLRKEI 303
>gi|241662555|ref|YP_002980915.1| ribokinase [Ralstonia pickettii 12D]
gi|240864582|gb|ACS62243.1| ribokinase [Ralstonia pickettii 12D]
Length = 321
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 161/304 (52%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+++VGS N D+ + RLP+ G+TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 17 VLIVGSLNMDLVIRTPRLPRPGQTVAAPALETIPGGKGANQAVAAARLGARVAMLGCVGD 76
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + L GV ++V G TG A V + + GQN+I+IV G N P
Sbjct: 77 DAYGTALREGLRREGVDTSMVSV--HAGAATGIACVTVANSGQNTIVIVAGANEMLTPTM 134
Query: 190 FGDEDLEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ ++A +++ Q E PD+V + K + G VI + P+P L
Sbjct: 135 I-EAQRAAFERARVIVCQLESPPDAVECAL-KLGQRLGKTVILNPAPAIGPLPTPWLAAC 192
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE+E LT P DS E +A H G + V+V LGA+G A +V+G+ +
Sbjct: 193 DYLIPNETEAALLTARPVDSPEAALDAAADLHAQGARHVIVTLGARGVA-YVDGD---AR 248
Query: 309 SIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++PA A+ IDTT AGDTF + A EG + + F AAA++ V GA PS+P
Sbjct: 249 QLMPAPVAQAIDTTAAGDTFVGALAAVLAEGAAPSAAIAFGQAAAAVSVTRLGAQPSIPF 308
Query: 367 RKSV 370
R +
Sbjct: 309 RSEL 312
>gi|398870463|ref|ZP_10625787.1| ribokinase [Pseudomonas sp. GM74]
gi|398208233|gb|EJM94970.1| ribokinase [Pseudomonas sp. GM74]
Length = 293
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ RLPK GET+ ++ T+ GGKGANQA A+L +G VG DA G+ +
Sbjct: 1 MDLVTRAPRLPKGGETLIGQSFTTVCGGKGANQAVAAARLGARVSMIGCVGNDAYGEALR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
AL + ++ + DG +G A++++ QN+I+IV G N + E D V
Sbjct: 61 GALLAEQIDCQAVSTI-DGS--SGVALIVVDDSSQNTIVIVPGANGALTAEAIDRFD-SV 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++ A +++ Q E+PD+ K R G VI + + P+P + ID L PNESE
Sbjct: 117 IRAAEVLICQLEVPDASVGHALKRGRELGKTVILNPAPVSRPLPSDWYASIDYLIPNESE 176
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVI 317
L+G+ DS + A + +G +V++ LGA+GS LF +G++ + P + +
Sbjct: 177 ASALSGLSVDSLDTARAAATRLIALGAGKVIITLGAQGS-LFADGQR-FEHFPAPVVKAV 234
Query: 318 DTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
DTT AGDTF FA GK + +RF AA+L V GA PS+P
Sbjct: 235 DTTAAGDTFVGGFAAALAAGKDEAQAIRFGQVAAALSVTRAGAQPSIP 282
>gi|149178299|ref|ZP_01856891.1| ribokinase [Planctomyces maris DSM 8797]
gi|148842825|gb|EDL57196.1| ribokinase [Planctomyces maris DSM 8797]
Length = 317
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 167/307 (54%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ + +LP GETV A+T GGKGANQA A++ +G VG+
Sbjct: 9 IAVLGSINMDLMIRSAKLPLPGETVIAETKAENPGGKGANQAVAAARMGAEVTMIGCVGD 68
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ + + L G+ Y V + +G AVVM++ G+N+I++V G N +
Sbjct: 69 DSFAEELLQNLKAEGINTRY--VTRKTDTTSGVAVVMVEMSGENAILVVPGANGLVGLAE 126
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +V+ ++ ++L+Q E+P I AK AR AGVPVI D A P ELL +D
Sbjct: 127 L-EQARQVICESDVLLMQLEVPVETVIAAAKIAREAGVPVILDPAPAPAGFPAELLK-VD 184
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PN+SE LTG P S E + A+ + G +Q+LV + +G+ LF +GE
Sbjct: 185 LICPNQSEAAALTGKPLTSLEDVVAAIPALVEQGPRQILVTMADQGAVLF-DGEAV---E 240
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IIP ++ ID+T AGD F A AV E + E FA+AA ++ GA +MPDR
Sbjct: 241 IIPPFQIQAIDSTAAGDAFAAGLAVKLAEQATLREAAHFASAAGAIAASGAGAQTAMPDR 300
Query: 368 KSVLNLL 374
+ + L+
Sbjct: 301 EQIETLI 307
>gi|456012361|gb|EMF46067.1| Ribokinase [Planococcus halocryophilus Or1]
Length = 293
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 162/308 (52%), Gaps = 24/308 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V+ D PK GET T+ GGKGANQA A+L +G VG+
Sbjct: 2 ITVVGSINMDLVVKTDNFPKQGETTLGNLYTTVPGGKGANQAVAVARLGSAVQMIGAVGQ 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + L GV ++ VK +G A ++L S+G N II+V G N S +
Sbjct: 62 DAFGNELLAGLKSEGVLIEQ---VKRTDGTSGIANILL-SEGDNRIIVVPGANHSVTTGE 117
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD---AGGMDAPIPQELLN 246
D + + + +V++Q E+P SV + + +GVP I + A G A E+L
Sbjct: 118 I-DALADQLVASELVVMQLEMPISVVQRTLEICHESGVPSILNPAPASGFTA----EMLP 172
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
F L+PNE+E + G ++E+ E +++V LG KG A F +GEK +
Sbjct: 173 FCTYLTPNETEAEEIFG---KNWEKALEKY-------PNRLVVTLGQKG-AQFYDGEKHV 221
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ P A+ +DTTGAGDTF + A VEGK E +RFA AAASL V+ GA MP
Sbjct: 222 LVAGFP-AKAVDTTGAGDTFNGALATALVEGKEFEWAVRFANAAASLSVEKFGAQGGMPK 280
Query: 367 RKSVLNLL 374
R +VL +
Sbjct: 281 RSTVLERM 288
>gi|381335649|ref|YP_005202616.1| ribokinase [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|356645539|gb|AET31379.1| ribokinase [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 308
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 164/308 (53%), Gaps = 28/308 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS D+ +DRLP GETV A + + GGKGANQA ++L + VG
Sbjct: 7 VLVIGSNVMDLISYVDRLPHKGETVEAPSFEMGFGGKGANQAVAASRLGARVAMLTCVGN 66
Query: 130 DANGKLITDALSGCGVRLDYM-NVVKDGGVPTGH-----AVVMLQSDGQNSIIIVGGTNM 183
D G R +++ N + GV TG+ A + ++S+G N I+IV G N
Sbjct: 67 DG---------FGVKTRANFVANHIDISGVLTGNQSNGVAPIFVESNGDNRILIVQGANT 117
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---I 240
PE D+ ++++K+A +++LQ+E+P NI+ A+ +P+I++ AP +
Sbjct: 118 ELTPEVLLDK-IDLIKQAKVIVLQQEVPMPTNIKAIHLAKKYNIPIIYNP----APAHKL 172
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
P ++L ID L PNESEL +T MP + ++ A + GV V+V +G +G+
Sbjct: 173 PLDVLQMIDYLIPNESELAAITNMPVSTVQETKSAARRLLSFGVANVIVTMGDRGALWIT 232
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
G++ +++ V IDTTGAGD F SFA F +G+S + + A A A+L V +
Sbjct: 233 AGQEA---TLVDGQDVNAIDTTGAGDAFVGSFAHYFAQGESLDAAIAQANAYAALSVMAR 289
Query: 359 GAIPSMPD 366
G S P+
Sbjct: 290 GTQKSYPN 297
>gi|117619763|ref|YP_856836.1| ribokinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117561170|gb|ABK38118.1| ribokinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 310
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 161/303 (53%), Gaps = 10/303 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAEVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + G+ D V D +PTG A++ + +G+NSI I N + P
Sbjct: 64 DAIGHQMKTGFAKDGI--DVSAVELDPKLPTGIAIIYVSDEGENSIGISAEANGALTPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ A +LLQ E+P + A+ AR+ G V+ + P+ ELL +D
Sbjct: 122 VKSHQ-TMIAAAHTLLLQLEVPLESVQEAARLARAHGTRVVLNPAPAR-PLSSELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ +EA + H+MG+ +V++ LG++G V K +Q+
Sbjct: 180 LITPNQTEAELLTGVKVTDEASAAEAAARFHQMGIGEVMITLGSQG----VYCSKGQQQA 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G + +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVKAVDTTAAGDTFNGALLAAELAGADFDAAVRFAHGAAALSVTRFGAQSSIPSK 295
Query: 368 KSV 370
+ V
Sbjct: 296 QEV 298
>gi|269797178|ref|YP_003311078.1| ribokinase [Veillonella parvula DSM 2008]
gi|269093807|gb|ACZ23798.1| ribokinase [Veillonella parvula DSM 2008]
Length = 295
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +GE
Sbjct: 4 IVVIGSCNMDIIVLADKRPTAGETIMGNELHIAHGGKGANQAVAAARLGAEVTMVGCIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G++I D L + DY+ V + T H + ++G NSII++ G N +
Sbjct: 64 DAYGQMILDNLKENFINTDYIVTVPNTTTGTAHITL---AEGDNSIIVIAGANAKV-DKS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 IVDNAWAAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPA-ADLDSEWLKLAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P S E+ A +++V LG+KG GE
Sbjct: 179 YITPNEHELSAL--YPNQSTEETLLA-------NENKIIVTLGSKGVGYADNGEI----H 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 226 IVPGFKVEPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTK 285
Query: 368 KSVLNLL 374
V L
Sbjct: 286 DEVAAFL 292
>gi|423293388|ref|ZP_17271515.1| ribokinase [Bacteroides ovatus CL03T12C18]
gi|392678331|gb|EIY71739.1| ribokinase [Bacteroides ovatus CL03T12C18]
Length = 304
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 161/310 (51%), Gaps = 10/310 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
++T +VV+GS+N D+ ++ DRLPK GET+ GGKGANQA A+L F
Sbjct: 1 MDTKKKIVVIGSSNTDMVIKSDRLPKPGETILGGNFLMNHGGKGANQAVAAARLGGDVTF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ ++G D G + + Y+ + P+G A++ + G+N I++ G N
Sbjct: 61 ICKIGNDIFGNETLEMFHKEKIDTTYVGITPQE--PSGVALINVDKKGENCIVVASGANG 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQ 242
+ + + +K+A IV++Q E P AK A+ G+ VI + A +P
Sbjct: 119 TLSTDDIQHAE-PAIKQASIVIMQLETPIESVTYAAKMAKKDGITVILNPAPAPTQQLPD 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
+LL +DIL PN +E ++GM E EA+ G++ V++ +GAKG AL E
Sbjct: 178 DLLANVDILIPNVTEAEIISGMHITDDESAKEAIRYISSKGIKTVIITMGAKG-ALAYEN 236
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+ I IPA +V +DTT AGDTF V EGK+ ++ + FA+ A+S+ V GA
Sbjct: 237 NEFIH---IPAFKVEAVDTTAAGDTFCGGLCVALSEGKNLKDAIIFASKASSISVTRMGA 293
Query: 361 IPSMPDRKSV 370
S+P RK +
Sbjct: 294 QVSIPLRKEI 303
>gi|424029736|ref|ZP_17769248.1| ribokinase [Vibrio cholerae HENC-01]
gi|408884513|gb|EKM23252.1| ribokinase [Vibrio cholerae HENC-01]
Length = 305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 160/310 (51%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DIAGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLL 374
P RK V L
Sbjct: 293 PTRKEVEEFL 302
>gi|420144854|ref|ZP_14652334.1| Sugar kinase, ribokinase family [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403546|gb|EJN56783.1| Sugar kinase, ribokinase family [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 309
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 159/307 (51%), Gaps = 14/307 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D ++I RLPK GET+A Q GGKGANQA A+ T F+G+VG+
Sbjct: 4 VTILGSINVDTILQIPRLPKPGETLAMSGKQVAGGGKGANQAIAAARAEADTAFIGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANGK++ AL ++D + TG A ++L +GQNSI++ GGTN K
Sbjct: 64 DANGKMMLKALQNA--KIDTTQISTSNYADTGEAFILLDDNGQNSILVDGGTNQEI---K 118
Query: 190 FGDEDL--EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
GD + E ++ A ++ Q E P + + + A+S GV I + + ELL
Sbjct: 119 IGDIETAHETIENADFLITQFETPLTTTLAAFRYAKSVGVTTILNPAPAKTDLDPELLKL 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
D++ PNE+E LTG+ ++ A K GV+ V++ +GAKG+ + +
Sbjct: 179 TDLIVPNETESETLTGIKVTDEASMNAAATALIKQGVKAVIITVGAKGAYYQTKAD---- 234
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSM 364
+ A +V +DTT AGDTF + + S + FA A+SL VQ GA PS+
Sbjct: 235 HGFVKAFKVDAVDTTAAGDTFIGALSSRLNSDLSNLPAAVLFANKASSLTVQKLGAQPSI 294
Query: 365 PDRKSVL 371
P +L
Sbjct: 295 PHLSEIL 301
>gi|340348019|ref|ZP_08671115.1| ribokinase [Prevotella dentalis DSM 3688]
gi|339608224|gb|EGQ13137.1| ribokinase [Prevotella dentalis DSM 3688]
Length = 319
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 166/308 (53%), Gaps = 19/308 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS+N D+ ++ DRLPK GET+ GGKGANQA ++L FV +VG
Sbjct: 23 ILVIGSSNTDMVIKSDRLPKPGETLLGGKFMMNPGGKGANQAVAASRLGGNVTFVCKVGR 82
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + G+ D ++++D +G A++ + S G+N I++ TN K
Sbjct: 83 DTFGKKARELFKEEGI--DVSHILEDPEGNSGVALINVDSKGENCIVVAESTN-DALTSK 139
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
+ EV+K + I++LQ EIP ++ A+ A + G VI + AP P +
Sbjct: 140 DIESLTEVIKASDILVLQLEIPMESVVKAAEIAHAHGKKVILNP----APAPSQGFPAGF 195
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ ID++ PNE+E ++G+ S E+ A K + G ++V+V LG++G A+ E
Sbjct: 196 LSNIDLIVPNETEASIISGIEVQSLEEAERAAKKIQEAGCKKVIVTLGSRG-AMIANHE- 253
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+++P+ +V +DTT AGDTF + AV E S EE RFA A+++ V GA
Sbjct: 254 ---ITVVPSDKVEAVDTTAAGDTFCGALAVALSENMSLEEGTRFACHASAISVTRMGAQS 310
Query: 363 SMPDRKSV 370
S+P R +
Sbjct: 311 SIPYRYEI 318
>gi|259906699|ref|YP_002647055.1| ribokinase [Erwinia pyrifoliae Ep1/96]
gi|387869399|ref|YP_005800768.1| ribokinase [Erwinia pyrifoliae DSM 12163]
gi|224962321|emb|CAX53775.1| Ribokinase [Erwinia pyrifoliae Ep1/96]
gi|283476481|emb|CAY72296.1| ribokinase [Erwinia pyrifoliae DSM 12163]
Length = 309
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 161/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + P+ GETV K Q GGKGANQA A+ F+ VGE
Sbjct: 7 LAVLGSINADHILNLAHFPRPGETVIGKQYQVAFGGKGANQAVAAARSGADMAFIACVGE 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I L+ R+D +V G TG A++ + +G+N+I I G N + PE+
Sbjct: 67 DDIGGRIRQQLAND--RIDVASVAVISGGATGVALIFVNGEGENTIGIYAGANAALTPER 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---ELLN 246
E + + +A ++L+Q E P + A+ A+ V+ + AP Q ELL
Sbjct: 125 V-LEHQQTIAQAQVLLMQLESPLDSVLAAARIAQHHHTRVVLNP----APATQLSDELLA 179
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E LTG+ +S E + A K H+ G+ VL+ LG++G L +G
Sbjct: 180 LVDIITPNETEAQILTGIAVNSDEDAARAAQKLHEKGIATVLITLGSRGVWLSEQGNG-- 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+PA V +DT AGDTF + +E + E +RFA AAA++ V GA PS+
Sbjct: 238 --HCVPAFSVAAVDTIAAGDTFNGALMTALLEQRPMTESVRFAHAAAAIAVTRHGAQPSV 295
Query: 365 PDRKSVLNLLQ 375
P R + + LQ
Sbjct: 296 PWRDEIDSFLQ 306
>gi|395242752|ref|ZP_10419748.1| Ribokinase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480000|emb|CCI85988.1| Ribokinase [Lactobacillus pasteurii CRBIP 24.76]
Length = 305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 154/304 (50%), Gaps = 20/304 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS+N D + + P+ GET+ A GGKGANQA AK T F+ +VG+
Sbjct: 4 IIVIGSSNVDTTLHVKDFPQAGETINASKVTVAGGGKGANQAIAAAKSGAETNFISRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + L+ GV+ + V+K G TG A + L GQN III G N S +
Sbjct: 64 DNFADFLIGELTKYGVKTNC--VMKTTGQSTGQAYITLNEAGQNDIIIDHGANYSLTVDD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+E + +A V+ Q E P I K A+ I + IPQELL D
Sbjct: 122 I-EEQSRLFGEADCVIAQFETPIESTIAAFKLAKKLNTLTILNPAPAIKEIPQELLQLTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E +TG+ + +++ K H++G++ V++ G KG+ L + +
Sbjct: 181 MIVPNETECELITGIKINEEADLAKNAQKLHELGIKNVVITYGDKGAYLSTDQ----VEK 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR------EECLRFAAAAASLCVQVKGAI 361
+IPA +V +DTT AGDTF +GF+ G + E+ A+ A+SL VQ GA
Sbjct: 237 LIPAFKVKAVDTTAAGDTF-----IGFLAGGLKADLANIEQAAILASRASSLAVQKLGAQ 291
Query: 362 PSMP 365
PS+P
Sbjct: 292 PSIP 295
>gi|388600849|ref|ZP_10159245.1| ribokinase [Vibrio campbellii DS40M4]
Length = 305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 160/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTSEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID ++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDAITPNETEAEVLTGVTVTDDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLLQ 375
P RK V L+
Sbjct: 293 PTRKEVEEFLE 303
>gi|345861144|ref|ZP_08813416.1| ribokinase [Desulfosporosinus sp. OT]
gi|344325766|gb|EGW37272.1| ribokinase [Desulfosporosinus sp. OT]
Length = 315
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 158/304 (51%), Gaps = 13/304 (4%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
++ P +VV+GS N D+ V+ R P+ GETV + + GGKGANQA A+L T
Sbjct: 1 MDQRPKIVVIGSLNMDLVVKALRAPRRGETVLGEEIHFIPGGKGANQAVGLARLGAETTM 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+G VG DA G + AL G+ + V + TG A ++L ++G NSI++V G N
Sbjct: 61 IGAVGSDAFGVELEKALQRNGINTSNVKVTSEA---TGVASILL-AEGDNSIVVVPGANA 116
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
C PE + E+ A +VLLQ EIP K AR G V+ + + + ++
Sbjct: 117 QCLPEDLDRCESEIA-AADLVLLQLEIPLVTVEYAVKLARKHGKIVMLNPAPAQS-LSED 174
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL+ +D L+PN SEL LT M +S I++ + + +GV + LGA+G AL G
Sbjct: 175 LLSQVDYLTPNRSELALLTRMSEES--TIAQGIEQLLNVGVSCCVTTLGAEGVALREIGG 232
Query: 304 KPIKQSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+K I R V+DTTGAGD F A A + KS +E FA ++L V GA
Sbjct: 233 SLVK---IRGFRVPVVDTTGAGDAFNAGLAYALAQKKSIQEAAEFAVQVSALAVTKFGAQ 289
Query: 362 PSMP 365
MP
Sbjct: 290 GGMP 293
>gi|282849414|ref|ZP_06258799.1| ribokinase [Veillonella parvula ATCC 17745]
gi|294794729|ref|ZP_06759864.1| ribokinase [Veillonella sp. 3_1_44]
gi|282581118|gb|EFB86516.1| ribokinase [Veillonella parvula ATCC 17745]
gi|294454091|gb|EFG22465.1| ribokinase [Veillonella sp. 3_1_44]
Length = 296
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V ++ P GET+ GGKGANQA A L VG +GE
Sbjct: 4 IVVIGSCNMDIVVLANKRPTAGETIMGNELHIAHGGKGANQAVAAAHLGAEVTMVGCIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G +I D L + DY+ V + T H + ++G NSII++ G N +
Sbjct: 64 DAYGHMIIDNLKENFINTDYIVTVPNTTTGTAHITL---AEGDNSIIVIAGANAKV-DQS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 VVDNAWSAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPA-ADLDSEWLELAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P S E+I A +++V LG+KG GE
Sbjct: 179 YITPNEHELSAL--YPNQSTEEILLA-------NENKIIVTLGSKGVGYADNGEI----H 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 226 IVPGFKVEPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTK 285
Query: 368 KSVLNLL 374
V L
Sbjct: 286 DEVAAFL 292
>gi|153833307|ref|ZP_01985974.1| ribokinase [Vibrio harveyi HY01]
gi|148870443|gb|EDL69364.1| ribokinase [Vibrio harveyi HY01]
Length = 305
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 161/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DL+ +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLDRIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGQIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLLQ 375
P RK V L+
Sbjct: 293 PTRKEVEEFLE 303
>gi|333396234|ref|ZP_08478051.1| ribokinase family sugar kinase [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336393883|ref|ZP_08575282.1| ribokinase family sugar kinase [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 309
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 158/307 (51%), Gaps = 14/307 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D ++I RLPK GET+A Q GGKGANQA A+ T F+G+VG+
Sbjct: 4 VTILGSINVDTILQIPRLPKPGETLAMSGKQVAGGGKGANQAIAAARAEADTAFIGKVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANGK++ AL ++D + TG A ++L +GQNSI++ GGTN K
Sbjct: 64 DANGKMMLKALQNA--KIDTTQISTSNYADTGEAFILLDDNGQNSILVDGGTNQEI---K 118
Query: 190 FGDEDL--EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
GD + E ++ A ++ Q E P + + + A+S GV I + + ELL
Sbjct: 119 IGDIETAHETIENADFLITQFETPLTTTLAAFRYAKSVGVTTILNPAPAKTDLDPELLKL 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
D++ PNE+E LTG+ ++ A K GV+ V++ +GAKG+ +
Sbjct: 179 TDLIVPNETESETLTGIKVTDEASMNAAATALIKQGVKAVIITVGAKGAYY----QTKAN 234
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSM 364
+ A +V +DTT AGDTF + + S + FA A+SL VQ GA PS+
Sbjct: 235 HGFVKAFKVDAVDTTAAGDTFIGALSSRLNSDLSNLPAAVLFANKASSLTVQKLGAQPSI 294
Query: 365 PDRKSVL 371
P +L
Sbjct: 295 PHLSEIL 301
>gi|293572905|ref|ZP_06683855.1| ribokinase [Enterococcus faecium E980]
gi|431081357|ref|ZP_19495447.1| ribokinase [Enterococcus faecium E1604]
gi|431122729|ref|ZP_19498426.1| ribokinase [Enterococcus faecium E1613]
gi|431738679|ref|ZP_19527621.1| ribokinase [Enterococcus faecium E1972]
gi|291607033|gb|EFF36405.1| ribokinase [Enterococcus faecium E980]
gi|430565289|gb|ELB04435.1| ribokinase [Enterococcus faecium E1604]
gi|430567674|gb|ELB06751.1| ribokinase [Enterococcus faecium E1613]
gi|430596792|gb|ELB34604.1| ribokinase [Enterococcus faecium E1972]
Length = 307
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 163/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + ++PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTKMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIEGAATGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVRKNKELITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ ++ + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHDSLVAAAEKMHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + + + +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLLPDLGNLKEAILYGNLASSIAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|253987538|ref|YP_003038894.1| ribokinase [Photorhabdus asymbiotica]
gi|253778988|emb|CAQ82148.1| ribokinase [Photorhabdus asymbiotica]
Length = 309
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 156/310 (50%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L VVGS N D + ++ P+ GETV K Q GGKGANQA + F+ VG+
Sbjct: 6 LAVVGSINADHILNLESFPRPGETVIGKQYQIAFGGKGANQAVAAGRSGADITFIACVGQ 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I L+ V + ++ G TG A++++ G+N I I G N + PE
Sbjct: 66 DDIGSRICQQLAMDNVNTSSIEAIE--GETTGVALILVNQQGENVICINAGANAALTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
F ++K+A +L+Q E P A+ A+ VI + AP + +LL+
Sbjct: 124 FHRYQ-NIIKEADALLIQLESPLETVQLAAETAKQNNTKVILNP----APAQKLSDQLLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E+ LTG+ +A H G++ V++ LG+ G L EK
Sbjct: 179 LVDIITPNETEVEYLTGITIKDNSDAEKAAKVLHGKGIETVIITLGSCGIWL---SEKGQ 235
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K I+P +V +DT AGDTF + A +EGK +RFA +AA++ V +GA PS+
Sbjct: 236 KGKIVPGFKVKAVDTIAAGDTFNGALATALLEGKVMLSAVRFAHSAAAIAVTRQGAQPSI 295
Query: 365 PDRKSVLNLL 374
P R + L
Sbjct: 296 PWRNEIDTFL 305
>gi|433652870|ref|YP_007296724.1| ribokinase [Prevotella dentalis DSM 3688]
gi|433303403|gb|AGB29218.1| ribokinase [Prevotella dentalis DSM 3688]
Length = 300
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 166/308 (53%), Gaps = 19/308 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS+N D+ ++ DRLPK GET+ GGKGANQA ++L FV +VG
Sbjct: 4 ILVIGSSNTDMVIKSDRLPKPGETLLGGKFMMNPGGKGANQAVAASRLGGNVTFVCKVGR 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + G+ D ++++D +G A++ + S G+N I++ TN K
Sbjct: 64 DTFGKKARELFKEEGI--DVSHILEDPEGNSGVALINVDSKGENCIVVAESTN-DALTSK 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
+ EV+K + I++LQ EIP ++ A+ A + G VI + AP P +
Sbjct: 121 DIESLTEVIKASDILVLQLEIPMESVVKAAEIAHAHGKKVILNP----APAPSQGFPAGF 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ ID++ PNE+E ++G+ S E+ A K + G ++V+V LG++G A+ E
Sbjct: 177 LSNIDLIVPNETEASIISGIEVQSLEEAERAAKKIQEAGCKKVIVTLGSRG-AMIANHE- 234
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+++P+ +V +DTT AGDTF + AV E S EE RFA A+++ V GA
Sbjct: 235 ---ITVVPSDKVEAVDTTAAGDTFCGALAVALSENMSLEEGTRFACHASAISVTRMGAQS 291
Query: 363 SMPDRKSV 370
S+P R +
Sbjct: 292 SIPYRYEI 299
>gi|424039372|ref|ZP_17777756.1| ribokinase [Vibrio cholerae HENC-02]
gi|408893059|gb|EKM30372.1| ribokinase [Vibrio cholerae HENC-02]
Length = 305
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 160/310 (51%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DIAGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVADDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLL 374
P RK V L
Sbjct: 293 PTRKEVEEFL 302
>gi|261491664|ref|ZP_05988246.1| ribokinase RbsK [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494217|ref|ZP_05990717.1| ribokinase RbsK [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261310120|gb|EEY11323.1| ribokinase RbsK [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312679|gb|EEY13800.1| ribokinase RbsK [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 309
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 162/314 (51%), Gaps = 24/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + GGKGANQA A+L F+G +G
Sbjct: 4 LTVLGSINADYVISVPYFAKPGETLTGHSYHIAYGGKGANQAVAAARLGAKVSFIGCIGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + A G+ + + + TG A++ + G+NSI+I G N
Sbjct: 64 DDIGKAMKSAFEQDGIDTRSIKTIPNE--MTGIAMIQVAESGENSIVISAGAN------- 114
Query: 190 FGDEDLEVVKK-------AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
G D VV K A +L+Q E P +Q AK A+ G VI + A +P
Sbjct: 115 -GHLDETVVAKCAAEITQADYLLMQLETPLPAIVQAAKLAQQNGTKVILNPAPARA-LPD 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELLN +D+++PNE+E LTG+ +A H+ G+++VL+ LG+KG +FV
Sbjct: 173 ELLNLLDMITPNETEAEILTGVKVVDEASAIQAAQVFHQKGIEKVLITLGSKG--VFVS- 229
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
E + + I+ RV +DTT AGDTF + +E K ++ +RFA AAA++ V KGA
Sbjct: 230 ENGVGK-IVAGFRVQAVDTTAAGDTFNGALVTAMLEDKPLDQAIRFAHAAAAISVTRKGA 288
Query: 361 IPSMPDRKSVLNLL 374
PS+P R+ L+ L
Sbjct: 289 QPSIPTRQETLDFL 302
>gi|146345335|gb|ABQ23679.1| sugar kinase [Lactobacillus reuteri]
Length = 307
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 161/309 (52%), Gaps = 19/309 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ +VGS N D +++ R+P GET+AA + AGGKGANQA A+ T FVGQVG+
Sbjct: 5 VTIVGSLNVDTTMKVKRMPLPGETIAALSKTNAAGGKGANQAVAAARSGAETAFVGQVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA GK++ + L V ++V G TG A ++L GQNSI++ GG N +
Sbjct: 65 DAGGKMMINDLKNNNVDTTGIHVDDQAG--TGSAAILLDESGQNSILVYGGANQQLSVK- 121
Query: 190 FGDEDL-EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
G ED + + V+ Q E P ++ + A+ GV I + AP I +LL
Sbjct: 122 -GVEDARDQIAATDFVIAQFETPQEATLRAFQIAKENGVKTILNP----APAHEINPDLL 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D++ PNE++ LTG+ + + K +MGV +++ +GAKG+ +
Sbjct: 177 KLTDLIIPNETDSAALTGIIVTDETSMLMSSAKFAQMGVPNLIITVGAKGAFYCTQD--- 233
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIP 362
+ IPA +V +DTT AGDTF + + S E+ + +A A+SL VQ GA+P
Sbjct: 234 -GYNFIPAFKVNAVDTTAAGDTFIGALSSQLKPDMSNIEKAIVYAQRASSLAVQKLGALP 292
Query: 363 SMPDRKSVL 371
S+P V+
Sbjct: 293 SIPTYDEVV 301
>gi|431801942|ref|YP_007228845.1| ribokinase [Pseudomonas putida HB3267]
gi|430792707|gb|AGA72902.1| ribokinase [Pseudomonas putida HB3267]
Length = 302
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 153/299 (51%), Gaps = 11/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ RLP+ GET+ ++ T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVARAQRLPRAGETLPGESFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V GV +G A++ + + QN I+IV G N P+
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVSTCQGVSSGVALITVDAASQNCIVIVPGGNGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D +++ A +++ Q E+P D+V +A+ G VI + P+P + I
Sbjct: 123 VQRFD-ALLQAAEVIICQLEVPADTVAWTLAR-GHELGKRVILNPAPATGPLPADWFARI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L+PNESE LTG+ + A K+G +V++ LGA+G+ L P
Sbjct: 181 DYLTPNESEAEALTGVAVTDLDSARRAGECLLKLGAGKVIITLGAQGALLV----TPRGH 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA V +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 237 QHFPAPVVQPLDTTAAGDTFIGGFAAGLVRGLEEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|162148933|ref|YP_001603394.1| ribokinase [Gluconacetobacter diazotrophicus PAl 5]
gi|209545312|ref|YP_002277541.1| ribokinase [Gluconacetobacter diazotrophicus PAl 5]
gi|161787510|emb|CAP57106.1| Ribokinase [Gluconacetobacter diazotrophicus PAl 5]
gi|209532989|gb|ACI52926.1| ribokinase [Gluconacetobacter diazotrophicus PAl 5]
Length = 316
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 158/324 (48%), Gaps = 19/324 (5%)
Query: 58 PVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKL 117
P PK+ + PLVV GS N D+ + P GET+ A+ + GGKGANQA A+L
Sbjct: 2 PRPKSKNH---PLVVFGSINIDMVARLHHFPAPGETLHAQGTDLGLGGKGANQAVAVARL 58
Query: 118 SHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIII 177
+G+ G+D +L GV D + + G TG A++ S G+N+I++
Sbjct: 59 GAEVLLMGRTGDDMFADYAATSLRRRGVGPD--GLFRSPGDTTGLAMICTDSAGENTIVV 116
Query: 178 VGGTNMSCWPEKFGDEDLEVV---KKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAG 234
GG N++ GD+ +V IVL+Q EIP + A+ +AG +I D
Sbjct: 117 AGGANLAMD----GDDVARLVPLLTPGAIVLMQCEIPMDTILAAARRVDAAGATLILDPA 172
Query: 235 GM-DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGA 293
+ DA +P EL +++PNE+E RLTG+ + +A + H+ G+++ ++KLGA
Sbjct: 173 PVPDAGLPDELFRLATLMTPNETETERLTGLRPHDPDSARQAAGRLHQKGLRRAIIKLGA 232
Query: 294 KGSALFVEGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAA 351
+G E IP V ID+ AGD F AV +G RFAAA
Sbjct: 233 RGVLYSDES----GHGFIPPFHVTAIDSVAAGDCFNGGLAVALSQGLDLARATRFAAACG 288
Query: 352 SLCVQVKGAIPSMPDRKSVLNLLQ 375
+L KGA + P R+ V LL
Sbjct: 289 ALATTRKGAADAAPTREEVEGLLS 312
>gi|336399696|ref|ZP_08580496.1| ribokinase [Prevotella multisaccharivorax DSM 17128]
gi|336069432|gb|EGN58066.1| ribokinase [Prevotella multisaccharivorax DSM 17128]
Length = 314
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 156/304 (51%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVVVGS N D+ + R P GET+ + GGKGANQA A+L T F+G+VG+
Sbjct: 11 LVVVGSTNIDMVISASRFPLPGETIIGHDFMSNFGGKGANQAVAAARLGAKTIFIGKVGD 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G L G+ + + + +G A++ G+N+II+ G N P +
Sbjct: 71 DDFGNSTLSHLKEEGIDTSF--IYRSTKASSGVALITTVVGGENTIIVNPGANFELSPTE 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
+ + + A IVL+Q E P + +K A+ G VI + A P+P ELL +
Sbjct: 129 I-ELSHKAFEAAAIVLMQLETPIDTILTASKIAKEYGCYVILNPAPAPTKPLPTELLENV 187
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D+L PN++E ++G+ +A+ K ++G++ V++ +G+ G ++GE
Sbjct: 188 DMLIPNKTEASTISGVDITDDVTTRQAIDKIKELGIKDVVITIGSHGVLSLIDGE----L 243
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ IPA +V +DTT AGDTF + + G + LRFA A+++ V +GA SMP
Sbjct: 244 TNIPAYKVKAVDTTAAGDTFCGALCAALLSGSKMPQALRFANQASAVTVTRRGAQVSMPH 303
Query: 367 RKSV 370
+ +
Sbjct: 304 LEDI 307
>gi|294638372|ref|ZP_06716625.1| ribokinase [Edwardsiella tarda ATCC 23685]
gi|451966328|ref|ZP_21919582.1| ribokinase [Edwardsiella tarda NBRC 105688]
gi|291088625|gb|EFE21186.1| ribokinase [Edwardsiella tarda ATCC 23685]
gi|451315107|dbj|GAC64944.1| ribokinase [Edwardsiella tarda NBRC 105688]
Length = 309
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 159/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D ++++ P+ GET+ K Q GGKGANQA + F+ VG
Sbjct: 6 LVVLGSINADHILKVEHFPRPGETLTGKGYQVAFGGKGANQAVAAGRSGADVAFIACVGA 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I L GV + + V G TG A++ + DG+N I I G N + P+
Sbjct: 66 DDIGERIRSQLVSDGVNIAAVEAV--AGESTGVALIFVNQDGENVIGIHAGANAALTPQY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V +A +L+Q E P + AK AR+ VI + AP +P+ LL+
Sbjct: 124 LARYQ-ALVTQADALLMQLESPIETVLAAAKLARAHNTKVILN----PAPARELPEALLH 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ E +A H G+ V++ LG++G + EG
Sbjct: 179 HIDVITPNETEAECLTGIQVHDDESARQAAAVLHGKGIATVMITLGSRGVWVSQEG---- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IIP RV IDT AGDTF + +EG + +RFA AAA++ V +GA PS+
Sbjct: 235 LGGIIPGFRVEAIDTIAAGDTFNGALLTALLEGNPLSDAVRFAHAAAAIAVTREGAQPSV 294
Query: 365 PDRKSVLNLLQ 375
P R+ + LQ
Sbjct: 295 PWRREIDAFLQ 305
>gi|403380002|ref|ZP_10922059.1| ribokinase [Paenibacillus sp. JC66]
Length = 311
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 160/315 (50%), Gaps = 22/315 (6%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VV+GS N D+ +R P GETV + + GGKGANQA AKL+ +G
Sbjct: 7 PQVVVIGSLNMDLVTRAERAPVKGETVLGQGFDMVPGGKGANQAVALAKLNAECTLIGAR 66
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D G + +L GV + V GV TG A +++ + NSII+V G N C P
Sbjct: 67 GDDDFGGQLVKSLDQHGVNTSKIKKVP--GVTTGVATIVVAEE-DNSIIVVPGANFHCTP 123
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQEL 244
E E+ E++++A +VL+Q EIP + + A G V+ + AP +P E+
Sbjct: 124 EDIEKEE-ELIRQADVVLIQMEIPVETVCKGIELAAKHGTTVVLNP----APARKLPAEI 178
Query: 245 LNFIDILSPNESELGRLTG-------MPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
+ ID L+PN +EL L G P YE++ A+ GV+ V+ LG +G+A
Sbjct: 179 YSRIDYLTPNITELAILAGEEAELQDKPEPRYEKMMRALADN---GVKHVITTLGEEGAA 235
Query: 298 LFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQV 357
+ + P VIDTTGAGD F+A+ A GK ++E + FA+ AA+L V
Sbjct: 236 YLAAHGEILTMPAYP-VHVIDTTGAGDAFSAALAFSLGLGKPQKEAIEFASKAAALSVTR 294
Query: 358 KGAIPSMPDRKSVLN 372
GA MP + N
Sbjct: 295 FGAQAGMPSLAEIEN 309
>gi|172060435|ref|YP_001808087.1| ribokinase [Burkholderia ambifaria MC40-6]
gi|171992952|gb|ACB63871.1| ribokinase [Burkholderia ambifaria MC40-6]
Length = 309
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 157/311 (50%), Gaps = 11/311 (3%)
Query: 62 NPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPT 121
NP+ PP + VVGS N D+ RLP GET+ + QT+ GGKGANQA A+L
Sbjct: 3 NPVK-PPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGASV 61
Query: 122 YFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGT 181
+G VG DA G + DAL+ R+D ++ + G TG A + + + G N+I++V G
Sbjct: 62 AMIGCVGNDAFGARLHDALA--AERIDVTHLRRIDGEATGVATITVDAHGANTIVVVPGA 119
Query: 182 NMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP 241
N +C D +V+ A +++ Q E+P + +A + PV+ + P+
Sbjct: 120 N-ACVDAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAIAHRTPVLLNPAPAR-PLF 177
Query: 242 QELLNFIDILSPNESELGRLTGMPT-DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF- 299
LL ID L NE+E LTG+ D + A C K GV VLV LGA+G
Sbjct: 178 DALLARIDYLVVNETEAESLTGIAVGDDASAVRAADALCAK-GVGNVLVTLGARGVCWRG 236
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
+ GE + + A +DTT AGDTF FA G S ++ + F AA++ V G
Sbjct: 237 IAGEGRLGARAVVA---VDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHG 293
Query: 360 AIPSMPDRKSV 370
A S+P R+ V
Sbjct: 294 AQTSIPTREEV 304
>gi|302187543|ref|ZP_07264216.1| carbohydrate kinase, PfkB [Pseudomonas syringae pv. syringae 642]
Length = 294
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 149/298 (50%), Gaps = 15/298 (5%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ + RLP+ GET++ +T T++GGKGANQA A+L +G VG DA G+ +
Sbjct: 1 MDLVIRAQRLPRPGETLSGETFDTVSGGKGANQAVAAARLGASVAMIGCVGADAYGEQLR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP---EKFGDED 194
AL + + VV GV TG A +++ ++ QN+I+IV G N P E+F
Sbjct: 61 TALLAEHIDCQAVTVVD--GVSTGIASIVVDANSQNAIVIVAGGNGRLSPALIERFD--- 115
Query: 195 LEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPN 254
++ + IV+ Q E+P AR+ G VI + P+P ID L PN
Sbjct: 116 -TLLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPANWYALIDYLIPN 174
Query: 255 ESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAA 314
ESE LTG+ DS A G + V++ LG +G+ LF IPA
Sbjct: 175 ESEAQTLTGVNVDSPAAAENAASAMLAAGARNVIITLGERGT-LFANASGVEH---IPAR 230
Query: 315 RV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
RV +DTT AGDTF FA G+ + +RF AAA++ V GA PS+P + V
Sbjct: 231 RVQAVDTTAAGDTFVGGFAAALSAGQDELQAIRFGQAAAAISVTRAGAQPSIPTFEEV 288
>gi|406669817|ref|ZP_11077080.1| ribokinase [Facklamia ignava CCUG 37419]
gi|405581787|gb|EKB55796.1| ribokinase [Facklamia ignava CCUG 37419]
Length = 309
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 168/313 (53%), Gaps = 18/313 (5%)
Query: 70 LVVVGSANFDIYVE-IDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GS N D+++ I+R+P++ E V ++ + GGK ANQA K+ TY +G VG
Sbjct: 4 IVVIGSINIDLFIYGIERIPRLNEAVLGESYEYGYGGKAANQAIALNKMDIKTYLIGSVG 63
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D G + L G + D++ VV+ TG AV+ + ++G+ + G N
Sbjct: 64 KDEYGSNYLNYLDGLNINTDHLKVVEKE--KTGTAVINIMNNGEYFSTTIPGANHYVDVS 121
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF- 247
+ E + VL+Q EI +A+ S V ++ DAG P+P LN
Sbjct: 122 EL--EKIITEINPDFVLIQFEILKETIYSIAEICNSMNVKLVVDAG---PPLPGLDLNKL 176
Query: 248 --IDILSPNESELGRLTGMPTDSYEQISEAVVKCHK-MGVQQVLVKLGAKGSALFVEGEK 304
I ILSPN+SE LTG+ +S + I E + ++ + +L+KLG +GS L+ +G+K
Sbjct: 177 GKIFILSPNQSEAEFLTGIKIESEQSIYETALTLYENSNSEYILLKLGEQGSYLY-DGQK 235
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+ P+ +V +DTT AGDTF ASF ++E + + + FA+ A+S+CV KGA
Sbjct: 236 G---ELFPSYKVNAVDTTAAGDTFIASFLKRYLETQDIPKSIDFASYASSICVTKKGAAE 292
Query: 363 SMPDRKSVLNLLQ 375
S+P K V++ Q
Sbjct: 293 SIPSYKEVMDGYQ 305
>gi|311033231|ref|ZP_07711321.1| ribokinase [Bacillus sp. m3-13]
Length = 310
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 162/314 (51%), Gaps = 31/314 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D +E D LP++GET+ KT GGKGANQA A+L G VG
Sbjct: 4 IAVVGSINLDYVIETDSLPELGETIKGKTFFCSPGGKGANQAVAAARLGGKVTMFGSVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG + L G+ + ++N + D +PTG A + L G N I+I+ G N
Sbjct: 64 DINGTYLKSNLEKEGIDVTHVNDIPD--IPTGAAFIEL-CQGDNRILIISGAN-DYTNNA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++ + +A +L Q E P + ++ +AG +I + AP + QE+++
Sbjct: 120 YMKSKIDQLLQADCILFQFETPLELLEELVPILHNAGKTIIVNP----APAFKLNQEIID 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQ---QVLVKLGAKGSALFVEGE 303
I L+PNE E Y+ + + + CH++ + ++++ G KG L+ + +
Sbjct: 176 MITYLTPNEHE-----------YQLVLDTSMSCHEVIRKYPNKLIITRGEKG-ILYWDDK 223
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
K I IIP+ +V +DTTGAGDTF+ +FA+ EG S E +RF AA + + KGA
Sbjct: 224 KEI---IIPSIKVTPVDTTGAGDTFSGAFALAISEGMSLPESIRFGTVAAGISITQKGAQ 280
Query: 362 PSMPDRKSVLNLLQ 375
MP RK V LL
Sbjct: 281 SGMPYRKDVDALLN 294
>gi|134300365|ref|YP_001113861.1| ribokinase [Desulfotomaculum reducens MI-1]
gi|134053065|gb|ABO51036.1| ribokinase [Desulfotomaculum reducens MI-1]
Length = 301
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 157/320 (49%), Gaps = 36/320 (11%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P ++VVGS N D+ +R+P VGETV + T+ GGKGANQA A+L +G
Sbjct: 2 TTPGILVVGSINMDLVSYSERIPSVGETVLGNSFNTVPGGKGANQAVAAARLGAKVVMLG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSD--GQNSIIIVGGTN- 182
VG+D G + D+L + D+++ VPT V ++ D G N I++V G N
Sbjct: 62 AVGKDQYGDCLLDSL-----KEDHIDTSGIKRVPTSTGVALINVDQRGNNQIVVVPGANF 116
Query: 183 ------MSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM 236
+S W + F D +V+LQ EIP + + G P+I +
Sbjct: 117 EITEADLSEWEQNFVTTD--------VVVLQLEIPIKTIDKAIMLSVKHGKPIILNPAPA 168
Query: 237 DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS 296
P+P+E +++D L PNE E L G P + Y V K ++V G KG
Sbjct: 169 Q-PLPKEWFSYVDYLVPNEHEAILLGGSPDNDY-------VTLRKEVKNSLIVTRGEKGV 220
Query: 297 ALFVEGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLC 354
+ + E +PA RV +DTT AGD F F+V E K +E ++FA+A A+L
Sbjct: 221 TIASKTE----MVNVPAYRVQTVDTTAAGDAFIGGFSVALAERKGVKEAVKFASAVAALS 276
Query: 355 VQVKGAIPSMPDRKSVLNLL 374
V +GA S+P R+ V N +
Sbjct: 277 VGKEGAQTSLPYRQEVENFI 296
>gi|269960045|ref|ZP_06174422.1| ribokinase [Vibrio harveyi 1DA3]
gi|269835344|gb|EEZ89426.1| ribokinase [Vibrio harveyi 1DA3]
Length = 306
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 160/310 (51%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDDDSAQEAANILHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ IIP RV DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIIPGFRVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLL 374
P R+ V L
Sbjct: 293 PTREEVEEFL 302
>gi|421497849|ref|ZP_15944997.1| ribokinase [Aeromonas media WS]
gi|407183172|gb|EKE57081.1| ribokinase [Aeromonas media WS]
Length = 310
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 164/308 (53%), Gaps = 10/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GET+ + Q + GGKGANQA A+L F+ ++G+
Sbjct: 4 LVVLGSVNADHVLRVPHFPRPGETLTGHSYQVVPGGKGANQAVAAARLGAAVSFIARIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + + G+ D V +D +PTG A++ + ++G+NSI I N + P
Sbjct: 64 DAIGRQMKAGFANDGI--DVSAVEQDEHLPTGIAIIYVSNEGENSIGISAEANGALTPAV 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ A +LLQ E+P + A+ AR+ G V+ + P+ ELL +D
Sbjct: 122 VKCHE-ALIADAHTLLLQLEVPLESVFEAARLARTHGTRVVLNPAPAR-PLSAELLALVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PN++E LTG+ ++A + H+MG+ V++ LG++G V +Q
Sbjct: 180 LITPNQTEAELLTGVKVTDEASAAQAAARFHQMGISDVMITLGSQG----VYCSNARQQQ 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+IP RV +DTT AGDTF + + G E +RFA AA+L V GA S+P +
Sbjct: 236 LIPGFRVEAVDTTAAGDTFNGALLAAELAGADFHEAVRFAHGAAALSVTRFGAQSSIPSK 295
Query: 368 KSVLNLLQ 375
+ V LQ
Sbjct: 296 QEVDTFLQ 303
>gi|188587960|ref|YP_001920831.1| ribokinase [Clostridium botulinum E3 str. Alaska E43]
gi|188498241|gb|ACD51377.1| ribokinase [Clostridium botulinum E3 str. Alaska E43]
Length = 309
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 172/317 (54%), Gaps = 28/317 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ ++I +PK GET+ +++ + + GGKGANQA + + ++G+
Sbjct: 4 ICVLGSMNMDLVMKIKDMPKSGETILSESYEKIPGGKGANQAVAAKRSGAYVSMIAKIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + D L + +DY V +D TG A++M+ G NSII+ G+NMS EK
Sbjct: 64 DDYGRTLRDELKNDDINIDY--VFEDDYNATGTAMIMVADTGNNSIIVNPGSNMSI-NEK 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D L+ +K++ I++ Q E P+ ++++ + A+ I + AP I ELL+
Sbjct: 121 EIDSTLDRIKESDILIAQFETPEEMSLRAFRNAKENEKITILNP----APAKKIKDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEG 302
DI+ PNE+E LTG+ ++ E +A GV+ V++ +G+KG+A+ F E
Sbjct: 177 VTDIIVPNETEAEVLTGVTVENVEDAKKAAKVFMDKGVKFVIITMGSKGAAVIGKDFCE- 235
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECL----RFAAAAASLCVQ 356
++PA +V IDTT AGD+F + + +E L +F +S+ VQ
Sbjct: 236 -------LVPAYKVNAIDTTAAGDSFIGGLSTKLNPNEITKENLLMSVKFGNMVSSIAVQ 288
Query: 357 VKGAIPSMPDRKSVLNL 373
+GA PS+P ++ V+ +
Sbjct: 289 REGAQPSIPYKEEVVKV 305
>gi|330447744|ref|ZP_08311392.1| ribokinase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491935|dbj|GAA05889.1| ribokinase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 306
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 164/314 (52%), Gaps = 17/314 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIASVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G L+ G+ + K+ PTG A++ + G+NSI + N E
Sbjct: 64 DAFGMLMRGNFVKDGINTRGLKTEKN--CPTGIAMIQVSDSGENSICLSPEANEHLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DL++++ A +L+Q E P + AK A+SA VI + AP + ELL
Sbjct: 122 I-EADLDMIRDAKYLLMQLETPMCGIEKAAKVAKSANTKVILNP----APARELSDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ + +A H G+ V++ LGAKG L G
Sbjct: 177 CVDMITPNETEAEVLTGVTVTDNQSAQKAADILHTKGIDTVMITLGAKGVWLSRMG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K II RV DTT AGDTF + G +EG + E ++FA AAA++ V GA S+
Sbjct: 233 KGDIISGFRVEATDTTAAGDTFNGALVTGLLEGLALESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLL-QYA 377
P R+ V L Q+A
Sbjct: 293 PTREEVDAFLAQHA 306
>gi|261250791|ref|ZP_05943365.1| ribokinase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954005|ref|ZP_12597046.1| ribokinase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937664|gb|EEX93652.1| ribokinase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342816273|gb|EGU51175.1| ribokinase [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 306
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 22/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L T F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLKADTGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVV---KDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
DA G I + ++D +N+ PTG A++ + G+NSI I N
Sbjct: 64 DAFGINIRENF-----KMDNINITGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
E + DLE +++A +L+Q E P + A+ A+ A VI + AP +P
Sbjct: 119 AEAI-EPDLERIRQANYLLMQLETPMCGIEKAAQVAKDARTNVILNP----APARELPDS 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL +D+++PNE+E LTG+ + EA H+ G++ V++ LGAKG L G
Sbjct: 174 LLACVDVITPNETEAEVLTGVTVTDNDSAQEAANALHRKGIEIVMITLGAKGVWLSQNG- 232
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ +IP +V DTT AGDTF + G +E E ++FA AAA++ V GA
Sbjct: 233 ---RGELIPGFKVDATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQ 289
Query: 362 PSMPDRKSVLNLLQ 375
S+P R V L+
Sbjct: 290 TSIPTRDEVDAFLE 303
>gi|197284001|ref|YP_002149873.1| ribokinase [Proteus mirabilis HI4320]
gi|227358129|ref|ZP_03842470.1| ribokinase [Proteus mirabilis ATCC 29906]
gi|425066894|ref|ZP_18470010.1| ribokinase [Proteus mirabilis WGLW6]
gi|425073672|ref|ZP_18476778.1| ribokinase [Proteus mirabilis WGLW4]
gi|194681488|emb|CAR40344.1| ribokinase [Proteus mirabilis HI4320]
gi|227161465|gb|EEI46502.1| ribokinase [Proteus mirabilis ATCC 29906]
gi|404594943|gb|EKA95498.1| ribokinase [Proteus mirabilis WGLW4]
gi|404601565|gb|EKB01957.1| ribokinase [Proteus mirabilis WGLW6]
Length = 308
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 164/312 (52%), Gaps = 12/312 (3%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQA-ACGAKLSHPTYFV 124
T P L V+GS N D + I + PK GETV + GGKGANQA ACG + T F+
Sbjct: 2 TTPRLAVLGSINVDHIMNIAQFPKPGETVIGHDYKIAFGGKGANQAVACGRSGADIT-FI 60
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
VG+DA G+ I L + D + ++ PTG A++++ G+N I IV G N +
Sbjct: 61 ACVGDDAIGREIIAQLKTDNIDTDAIRIIPK--TPTGVAMILVNEQGENVISIVAGANSA 118
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
P + ++++A +L+Q E P + AK A++ VI + P+ E
Sbjct: 119 LTPSHL-HQYRHIIEQADALLMQLESPLDTVFEAAKQAKAHQTKVILNPAPAQ-PLSDEF 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+FIDI++PNE+E LTG+ ++A H G++ VL+ LG++G +G
Sbjct: 177 LSFIDIITPNETEAEILTGISVHDEVGAAKAANILHSKGIKHVLITLGSRGVWFSEQG-- 234
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
IIP RV +DT AGDTF +F +EGKS + +RFA AAA++ V GA
Sbjct: 235 --TGMIIPGFRVEAVDTIAAGDTFNGAFVTAILEGKSAHDAIRFAHAAAAIAVTRHGAQS 292
Query: 363 SMPDRKSVLNLL 374
S+P R + + L
Sbjct: 293 SVPWRDEIKSFL 304
>gi|226186386|dbj|BAH34490.1| probable ribokinase [Rhodococcus erythropolis PR4]
Length = 288
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 156/308 (50%), Gaps = 26/308 (8%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P +VVVGS N D+ + R P GET+ T AGGKG+NQA AK F+G V
Sbjct: 4 PRIVVVGSINMDLTTSVARFPAPGETLLGTAFATAAGGKGSNQAIAAAKAGGDVSFIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D G + + L G GV + V DG P+G A + + D +N+II+V G N S
Sbjct: 64 GDDGFGTQLRETLQGAGVDTALLRSV-DG--PSGVAAITVSEDAENNIIVVPGANSSI-- 118
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ DL+ + +A I+L Q EIP A+ A + G VI + + +P L++
Sbjct: 119 TSLTEADLDAISRADILLCQLEIPVETVTAAAEHAHANGTTVILNPSPVQ-ELPAPLIDA 177
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+DIL N++E EQ++ + V ++ LGA G+ L E
Sbjct: 178 VDILIVNQTE-----------SEQLAAVTGR-----VAYLVTTLGAGGADLKTGDETVHA 221
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
S PA +DTTGAGD FT +FAV +V+ + R L+FAA A SL V+GA S P R
Sbjct: 222 DS--PAVTPVDTTGAGDAFTGAFAVEWVQDQDR--ALQFAATAGSLATTVRGASVSSPTR 277
Query: 368 KSVLNLLQ 375
+ +L+
Sbjct: 278 AVIEKVLK 285
>gi|269964357|ref|ZP_06178599.1| ribokinase [Vibrio alginolyticus 40B]
gi|269830854|gb|EEZ85071.1| ribokinase [Vibrio alginolyticus 40B]
Length = 305
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 159/306 (51%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFKMDGI--DITGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ E EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGITVTDNESAQEAANVLHGKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ II RV DTT AGDTF +F G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGEIISGFRVEATDTTAAGDTFNGAFVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV 370
P R+ V
Sbjct: 293 PTREEV 298
>gi|254362592|ref|ZP_04978688.1| ribokinase RbsK [Mannheimia haemolytica PHL213]
gi|452745717|ref|ZP_21945550.1| ribokinase [Mannheimia haemolytica serotype 6 str. H23]
gi|153094199|gb|EDN75084.1| ribokinase RbsK [Mannheimia haemolytica PHL213]
gi|452086319|gb|EME02709.1| ribokinase [Mannheimia haemolytica serotype 6 str. H23]
Length = 309
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 162/314 (51%), Gaps = 24/314 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ + GGKGANQA A+L F+G +G
Sbjct: 4 LTVLGSINADHVISVPYFAKPGETLTGHSCHIAYGGKGANQAVAAARLGAKVSFIGCIGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + A G+ + + + TG A++ + G+NSI+I G N
Sbjct: 64 DDIGKAMKSAFEQDGIDTRSIKTIPNE--MTGIAMIQVAESGENSIVISAGAN------- 114
Query: 190 FGDEDLEVVKK-------AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
G D VV K A +L+Q E P +Q AK A+ G VI + A +P
Sbjct: 115 -GHLDETVVAKCAAEITQADYLLMQLETPLPAIVQAAKLAQQNGTKVILNPAPARA-LPD 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELLN +D+++PNE+E LTG+ +A H+ G+++VL+ LG+KG +FV
Sbjct: 173 ELLNLLDMITPNETEAEILTGVKVVDEASAIQAAQVFHQKGIEKVLITLGSKG--VFVS- 229
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
E + + I+ RV +DTT AGDTF + +E K ++ +RFA AAA++ V KGA
Sbjct: 230 ENGVGK-IVAGFRVQAVDTTAAGDTFNGALVTAMLEDKPLDQAIRFAHAAAAISVTRKGA 288
Query: 361 IPSMPDRKSVLNLL 374
PS+P R+ L+ L
Sbjct: 289 QPSIPTRQETLDFL 302
>gi|387891193|ref|YP_006321491.1| ribokinase [Escherichia blattae DSM 4481]
gi|414595021|ref|ZP_11444652.1| ribokinase [Escherichia blattae NBRC 105725]
gi|386926026|gb|AFJ48980.1| ribokinase [Escherichia blattae DSM 4481]
gi|403193941|dbj|GAB82304.1| ribokinase [Escherichia blattae NBRC 105725]
Length = 309
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 160/314 (50%), Gaps = 10/314 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+ T LVV+GS N D + + P GETV Q GGKGANQA + F
Sbjct: 1 MKTSGQLVVLGSINADHILNLHHFPTPGETVKGSHYQVAFGGKGANQAVAAGRSGANIAF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ VG+D G+ + LS + + ++ V G TG A++ + +G+N I I GG NM
Sbjct: 61 IACVGDDDTGRQVCQQLSSDNIDIAPISTVA--GESTGVALIFVNHEGENVIGIHGGANM 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ ++ +++ A +L+Q E P + + A+ AR VI + P+ E
Sbjct: 119 AL-TTSLVEQHQQLIAGADALLMQLESPLASVLAAAQIARRHHTQVILNPAPA-CPLSDE 176
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL +DI++PNE+E LTG+P ++A H G+ V++ LG+KG L +G
Sbjct: 177 LLGLVDIITPNETEAEILTGIPVTDDASAAQAARVLHAKGIATVIITLGSKGVWLSEQGT 236
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+P RV +DT AGDTF + G +EG+S + +RFA AAA++ V KGA
Sbjct: 237 G----QRVPGFRVNAVDTIAAGDTFNGAMVTGLLEGQSLAQSIRFAHAAAAIAVTRKGAQ 292
Query: 362 PSMPDRKSVLNLLQ 375
PS+P R + LQ
Sbjct: 293 PSVPWRAEIDAFLQ 306
>gi|377832424|ref|ZP_09815382.1| ribokinase [Lactobacillus mucosae LM1]
gi|377553616|gb|EHT15337.1| ribokinase [Lactobacillus mucosae LM1]
Length = 306
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 159/304 (52%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + R P GET++A + + GGKGANQA A+ T+F+G VG
Sbjct: 5 IAVLGSINVDTTYHVQRFPMPGETISAGSKSSAPGGKGANQAVAAARSGAKTWFIGMVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + +AL + + + + G TG A++ L ++GQN I++ GG N + E
Sbjct: 65 DNEGKFMREALQEDHIDTKLIGIDELHG--TGTALITLDAEGQNDIMVYGGANQAMTTEV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D V ++ ++ Q E P +V + K A+ GV I + +P ELL + D
Sbjct: 123 LKNAD-AVFEEIDFLISQFETPQAVTAEAFKQAKEHGVTTILNPAPAHEILP-ELLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PN+SE LTG+ + + ++ + G + +L+ LG+KG V P
Sbjct: 181 VVIPNDSESFVLTGIKITDEDSMLKSAEWFKQQGAKNLLITLGSKG----VFYCTPHGHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGDTF + A + S + L +A A+SL VQ GA+PS+P
Sbjct: 237 MVPAFKVKAVDTTAAGDTFIGALASQLDDDLSNVADALVYAQRASSLTVQKMGAMPSIPT 296
Query: 367 RKSV 370
+ V
Sbjct: 297 GEEV 300
>gi|444348531|ref|ZP_21156164.1| LOW QUALITY PROTEIN: ribokinase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443546786|gb|ELT56391.1| LOW QUALITY PROTEIN: ribokinase [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 309
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 163/309 (52%), Gaps = 10/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L P F+
Sbjct: 5 LVVLGSVNADHMIRVPRFARAGETLRGSGYRIAYGGKGANQAVAAARLKDPNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G+ + A + G+ + V+ TG A++ + +G+NSI+I G N +C
Sbjct: 65 LGNDDIGRTMKAAFAKDGINTATITQVEQE--MTGVAMIQVADNGENSIVINAGAN-ACL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S + A+ A+ G VI + A +P+ELL
Sbjct: 122 DEHLVSCYASHIQQADALLMQLETPLSAICKAAQIAKQNGTKVILNPAPAQA-LPEELLR 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LT + + ++A + H++GVQ VL+ LGAKG G+ I
Sbjct: 181 QLYMITPNETEAEILTDIKVEDKISAAQAAKRFHQLGVQIVLITLGAKGVYFSENGQGQI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
A+ DTT AGDTF + AV +EGK +RFA AAA++ V +GA PS+P
Sbjct: 241 IGGFRVKAK--DTTAAGDTFNGALAVALLEGK-HTNAIRFAHAAAAISVTREGAQPSIPS 297
Query: 367 RKSVLNLLQ 375
R L+ L+
Sbjct: 298 RAEALDFLE 306
>gi|304317163|ref|YP_003852308.1| ribokinase [Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778665|gb|ADL69224.1| ribokinase [Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 315
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 155/304 (50%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N DI ++++ +PK+GETV AK GGKGANQA AKL +G+VG+
Sbjct: 4 ILVVGSINMDIVIKVEHIPKIGETVIAKEVNYSFGGKGANQAVAIAKLGGNVTMIGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + + L V+ + + D TG A + + G+N+I + G N E+
Sbjct: 64 DNFGKELIENLDKQKVKPSGIEI--DKTEKTGMAFIYVSDKGENNISVNQGANKKLDVEQ 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ L++ A I +LQ EIP + + VI + AP IP+E+L
Sbjct: 122 I-NRHLDLFDAAEICVLQLEIPIETVKYAIEICNKKNIKVILNP----APARKIPEEILK 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
I IL+PNESEL LT + E I+ A + GVQ ++ LG KG F++ +
Sbjct: 177 NIYILTPNESELSILTKKNVKTIEDINNASEILLESGVQNIITTLGEKGC--FLKNKNDS 234
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
IDTT AGD+FT + ++ GKS +E + FA ++L V +G S+PD
Sbjct: 235 LHFAAVQVDAIDTTAAGDSFTGAISIALNNGKSIKEAIEFATYVSALTVTKEGTQDSLPD 294
Query: 367 RKSV 370
+ V
Sbjct: 295 KLEV 298
>gi|51891909|ref|YP_074600.1| ribokinase [Symbiobacterium thermophilum IAM 14863]
gi|51855598|dbj|BAD39756.1| ribokinase [Symbiobacterium thermophilum IAM 14863]
Length = 312
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 166/312 (53%), Gaps = 14/312 (4%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
P+VVVGS N D+ V +R P GETV A GGKGANQA A+LS P VG+VG
Sbjct: 4 PVVVVGSLNLDLVVNPERAPAAGETVFAPRLDQFPGGKGANQAVAAARLSAPVAMVGRVG 63
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+DA G + ++L GV + ++ G TG AV+ +++ GQN I++V G N PE
Sbjct: 64 QDAFGDRLLESLRADGVATEGISRSATAG--TGTAVITVEATGQNRIVVVSGANAEVTPE 121
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF- 247
+ ++ A +LLQ E+P ++ A+ A +AGVPVI D A E L
Sbjct: 122 LV-EAHGPLIASASALLLQLEVPVEACVRAAELAAAAGVPVILDPAPAPAEPLPEPLRRN 180
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE---- 303
+++PNE+E LTG+P EA G +QVL+KLG++G+ LF G
Sbjct: 181 TWLITPNETEAAALTGVPVAGRCGAEEAARVLWAQGFRQVLIKLGSEGAYLFRGGAGQWF 240
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+P + +P V+DTT AGD F A G + EE +R+ AA +L V GA P+
Sbjct: 241 EPFR---VP---VVDTTAAGDAFAGGLAAALHRGMALEEAVRWGMAAGALAVTRPGAQPA 294
Query: 364 MPDRKSVLNLLQ 375
M + ++ LL+
Sbjct: 295 MGNLDELMTLLR 306
>gi|251791889|ref|YP_003006609.1| ribokinase [Aggregatibacter aphrophilus NJ8700]
gi|247533276|gb|ACS96522.1| ribokinase [Aggregatibacter aphrophilus NJ8700]
Length = 319
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 164/314 (52%), Gaps = 9/314 (2%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY-- 122
N LVV+GS N D +++ R K GET++ + GGKGANQA A+L
Sbjct: 9 NMCAKLVVLGSINVDHVIQVPRFVKAGETLSGSHYRITYGGKGANQAVAAARLKAQNTQV 68
Query: 123 -FVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGT 181
F+ +G D GK + +A + G+ + + +++ +G A++ + G+NSI+I G
Sbjct: 69 DFIACIGHDDIGKAMKNAFAQDGINVTPIRQIENE--MSGIAMIQVAESGENSIVIAAGA 126
Query: 182 NMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP 241
N + E +E E +++A +L+Q E + A A+ VI + + +P
Sbjct: 127 N-AYLDESLVEEQAENIRQADALLMQLETRLAAICYAADIAKQHHTKVILNPAPAN-TLP 184
Query: 242 QELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
Q LL + +++PNE+E LTG+ + + A K H GVQ VL+ LGAKG +
Sbjct: 185 QTLLANLYMITPNETEAEILTGIKVEDEAGAARAAEKLHHWGVQIVLITLGAKGVYVSEN 244
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ I + A+ DTT AGDTF + V +EGKS + +RFA AAA++ V GA
Sbjct: 245 NQGQIIEGFRVTAK--DTTAAGDTFNGALVVSLLEGKSLTDAIRFAHAAAAISVTRAGAQ 302
Query: 362 PSMPDRKSVLNLLQ 375
PS+P+R L+ L+
Sbjct: 303 PSIPNRAETLDFLE 316
>gi|416893210|ref|ZP_11924496.1| ribokinase RbsK [Aggregatibacter aphrophilus ATCC 33389]
gi|347814238|gb|EGY30888.1| ribokinase RbsK [Aggregatibacter aphrophilus ATCC 33389]
Length = 310
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 163/309 (52%), Gaps = 9/309 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D +++ R K GET++ + GGKGANQA A+L F+
Sbjct: 5 LVVLGSINVDHVIQVPRFVKAGETLSGSHYRIAYGGKGANQAVVAARLKAQNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G+ + +A + G+ + + +++ +G A++ + G+NSI+I G N +
Sbjct: 65 IGHDDIGRAMKNAFAQDGINVTPIRQIENE--MSGIAMIQVAESGENSIVIAAGAN-AYL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +E E +++A +L+Q E P + A A+ VI + + +PQ LL
Sbjct: 122 DESLVEEQAENIRQADALLMQLETPLAAICYAADIAKQHHTKVILNPAPAN-TLPQTLLA 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + + A K H GVQ V + LGAKG + + I
Sbjct: 181 NLYMITPNETEAEILTGIKVEDEAGAARAAEKLHHWGVQIVFITLGAKGVYVSENNQGQI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ A+ DTT AGDTF + V +EGKS + +RFA AAA++ V GA PS+P+
Sbjct: 241 IEGFRVTAK--DTTAAGDTFNGALVVSLLEGKSLTDAIRFAHAAAAISVTRAGAQPSIPN 298
Query: 367 RKSVLNLLQ 375
R L+ L+
Sbjct: 299 RAETLDFLE 307
>gi|387929199|ref|ZP_10131876.1| sugar kinase, ribokinase family protein [Bacillus methanolicus PB1]
gi|387586017|gb|EIJ78341.1| sugar kinase, ribokinase family protein [Bacillus methanolicus PB1]
Length = 306
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 158/312 (50%), Gaps = 17/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ ID++PK GET+ A + GGKGANQA AKL V +VG+
Sbjct: 3 IAVIGSNMVDLISYIDKMPKEGETLEAPDFKIGCGGKGANQAVAAAKLGSKVMMVTKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D L G+ ++ + V G P+G A + + + +N I+I+ G N PE
Sbjct: 63 DIFADNTIKNLKSYGIDTEFTSKVP--GTPSGVAPIFVDPESRNRILIIKGANQHLLPED 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL-LNFI 248
D E +KK +++LQ EIP + G+PVI + AP ++L ++
Sbjct: 121 V-DRSAEKLKKCSLIVLQLEIPLQTVYHAIEFGNKHGIPVILNP----APASKDLDFKYV 175
Query: 249 ---DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D PNESEL LTGMP ++ +QI EA + G++ V+V +G++G ++V E
Sbjct: 176 CKSDFFIPNESELEILTGMPVENEKQIREAASTLIEKGLKNVIVTMGSRG-VMWVTKE-- 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
K + + +V IDTTGAGD F FA FV+ ++ A A A+L V +G S
Sbjct: 233 -KTHTVESHKVAAIDTTGAGDAFIGCFAHFFVQNGDVLNAIKMATAFAALSVTKRGTQTS 291
Query: 364 MPDRKSVLNLLQ 375
P + + L+
Sbjct: 292 YPSVEELEQFLK 303
>gi|254505672|ref|ZP_05117818.1| ribokinase [Vibrio parahaemolyticus 16]
gi|219551325|gb|EED28304.1| ribokinase [Vibrio parahaemolyticus 16]
Length = 306
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 163/309 (52%), Gaps = 22/309 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ T F+ VG+
Sbjct: 4 LVVLGSVNVDHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADTGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNV--VK-DGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
DA G I + ++D +N+ VK PTG A++ + G+NSI I N
Sbjct: 64 DAFGINIRENF-----KMDNININGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
E + DLE +++A +L+Q E P + A+ A+ A VI + AP + E
Sbjct: 119 AESI-EPDLERIRQAKYLLMQLETPMCGIEKAARVAKEAKTNVILNP----APARELSDE 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL +D+++PNE+E LTG+ + E EA H G++ V++ LGAKG L G
Sbjct: 174 LLACVDVITPNETEAEVLTGITVNDNETAQEAANALHGKGIELVMITLGAKGVWLSQNG- 232
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ +IP +V DTT AGDTF + G +E E ++FA AAA++ V GA
Sbjct: 233 ---RGKLIPGFKVEATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQ 289
Query: 362 PSMPDRKSV 370
S+P R V
Sbjct: 290 TSIPTRGEV 298
>gi|297588141|ref|ZP_06946785.1| possible ribokinase [Finegoldia magna ATCC 53516]
gi|297574830|gb|EFH93550.1| possible ribokinase [Finegoldia magna ATCC 53516]
Length = 299
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 159/296 (53%), Gaps = 12/296 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D ++ PK GET+++ + GGKGANQA KL F+ VG
Sbjct: 10 ILVIGSVNVDTTYNLENFPKPGETISSLSKSRSVGGKGANQAIACQKLGGDVKFLACVGN 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + I + + GV D N++K V TG A++ + GQN I++ G N + +
Sbjct: 70 DMDADFIFEHMREYGV--DTSNIIK-KDVDTGTALINVDKTGQNEIVLDHGANYAITIQD 126
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D+++E++ + I++LQ EIP VN K A+ GV VI + + + +++L+ +D
Sbjct: 127 I-DDNIELLDECDILILQMEIPQEVNEYAIKKAKEKGVFVILNPAPSEFEV-EDILDKVD 184
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+ PNE+E+ R + S + EA + V V++ LG GS F + E IKQ
Sbjct: 185 LFVPNENEILRYS-----SKNNLKEAADELLDKNVGSVIITLGENGSEYFSKTEH-IKQD 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
I A+V+DTT AGD++ + AV + KS +E + FA A+S V KG+ S+P
Sbjct: 239 AIK-AKVVDTTSAGDSYIGAMAVMLDQKKSIKEAMEFATKASSKTVTRKGSGESIP 293
>gi|89076719|ref|ZP_01163005.1| ribokinase [Photobacterium sp. SKA34]
gi|89047618|gb|EAR53227.1| ribokinase [Photobacterium sp. SKA34]
Length = 306
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 167/314 (53%), Gaps = 17/314 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G L+ D G+ D V + G PTG A++ + G+NSI + N + E+
Sbjct: 64 DAFGLLMHDNFIKDGI--DVRGVKTEMGTPTGIAMIQVSDCGENSICLSAEAN-NKLTEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DL+ +++A +L+Q E P + AK A+ A VI + AP + ELL
Sbjct: 121 AIESDLDTIRQAEYLLMQLETPMCGIEKAAKVAKLASTTVILNP----APARELSDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ + +A H G++ V++ LGAKG L G
Sbjct: 177 CVDVITPNETEAEVLTGVMVTDNQSAQQAADILHGKGIKTVMITLGAKGVWLSQNGSG-- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
II RV DTT AGDTF + G +E + E ++FA AAA++ V GA S+
Sbjct: 235 --DIISGFRVEATDTTAAGDTFNGALVTGLLEDLALESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV-LNLLQYA 377
P R+ V L L Q+A
Sbjct: 293 PTREEVDLFLAQHA 306
>gi|398954249|ref|ZP_10675878.1| ribokinase [Pseudomonas sp. GM33]
gi|398152709|gb|EJM41222.1| ribokinase [Pseudomonas sp. GM33]
Length = 293
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 6/288 (2%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ RLPK GET+ ++ T++GGKGANQA A+L +G VG DA G +
Sbjct: 1 MDLVTRAPRLPKGGETLIGQSFATVSGGKGANQAVAAARLGAQVSMIGCVGNDAYGDALR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
AL + ++ + DG +G A++++ QN+I+IV G N + E D V
Sbjct: 61 GALLAEQIDCQAVSTI-DGS--SGVALIVVDDSSQNTIVIVPGANGALTAEAIDRFD-SV 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++ A +++ Q E+PD+ K R G VI + P+P ID L PNESE
Sbjct: 117 IQAADVLICQLEVPDASVGHALKRGRELGKTVILNPAPASRPLPSHWYRSIDYLIPNESE 176
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVI 317
L+G+ DS E A + +G +V++ LGA+GS LF +G++ + P + +
Sbjct: 177 ASALSGVTVDSLESAQAAATRLIALGAGKVIITLGAQGS-LFADGQR-FEHFPAPVVKAV 234
Query: 318 DTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
DTT AGDTF FA G+ + +RF AA+L V GA PS+P
Sbjct: 235 DTTAAGDTFVGGFAAALAAGQDEVQAIRFGQVAAALSVTRAGAQPSIP 282
>gi|374331230|ref|YP_005081414.1| Ribokinase, bacterial [Pseudovibrio sp. FO-BEG1]
gi|359344018|gb|AEV37392.1| Ribokinase, bacterial [Pseudovibrio sp. FO-BEG1]
Length = 307
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 157/315 (49%), Gaps = 24/315 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N DI DRLP+ GET+ + GGKG NQA +KL VG++G
Sbjct: 3 IVIVGSINVDITTRSDRLPQPGETLHGHSYAINLGGKGCNQAVAVSKLGGGAQLVGRIGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L GV +++ +D G TG AV+ + S+ +NSI ++GG N++
Sbjct: 63 DGFGDIAARHLEDMGVSTEHVLTHEDHG--TGIAVIGVDSNSENSITVIGGANLAIDESD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI---PQELLN 246
+V++ A I+LLQ EIP + AK R++G VIFD AP+ P+ L
Sbjct: 121 L-KRTSDVLEHAQILLLQLEIPIEACLSAAKKVRASGGKVIFDP--APAPVNGLPEGFLQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG-------SALF 299
+D+++PNE+E LTG + E+ + A + GV +VKLGA+G S F
Sbjct: 178 NVDVVTPNETETEILTGFRPTNAEEAAHAANLLREQGVAAAVVKLGARGVYFKDETSEGF 237
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
VE P K IDT AGD F A GK+ E +RFAAA +L G
Sbjct: 238 VE---PFK------VNAIDTVAAGDCFNGGLAYALAGGKTLAEAVRFAAACGALSTTKHG 288
Query: 360 AIPSMPDRKSVLNLL 374
A S P V L+
Sbjct: 289 AATSAPTLAEVEALM 303
>gi|343501141|ref|ZP_08739022.1| ribokinase [Vibrio tubiashii ATCC 19109]
gi|418476729|ref|ZP_13045879.1| ribokinase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342818760|gb|EGU53612.1| ribokinase [Vibrio tubiashii ATCC 19109]
gi|384575593|gb|EIF06030.1| ribokinase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 306
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 160/306 (52%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVV---KDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
DA G I + ++D +N+ + PTG A++ + G+NSI I N
Sbjct: 64 DAFGINIRENF-----KMDNINIAGVKMEPNCPTGIAMIQVADSGENSICISAEANAKLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
+ + DLE ++ A +L Q E P + AK A+ A VI + P+ ELL
Sbjct: 119 ADAI-ESDLEQIRSAKYLLTQLETPICGIEKAAKVAKEARTNVILNPAPA-RPLSDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ + EA + H+ G++ V++ LGAKG L G
Sbjct: 177 CVDVITPNETEAEVLTGITVTDNDSAQEAANELHRKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ +IP +V DTT AGDTF + G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGELIPGFKVDATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV 370
P R+ V
Sbjct: 293 PSREEV 298
>gi|310778130|ref|YP_003966463.1| ribokinase [Ilyobacter polytropus DSM 2926]
gi|309747453|gb|ADO82115.1| ribokinase [Ilyobacter polytropus DSM 2926]
Length = 305
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 162/307 (52%), Gaps = 12/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ ++ + PK GETV K + + GGKGANQA A+L +G +G+
Sbjct: 4 ILVVGSINMDLVTKVSKSPKTGETVLGKDFKQIPGGKGANQAVAMARLGSDVAMIGMLGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + + GV + + KD + TG A +++ D NSII+V G N +
Sbjct: 64 DSFGDTLLSVIKKDGVDISGIGRCKD--ISTGIATIVVDDDANNSIIVVPGANFEIEKKD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D ++++ + + IV+ Q E P + K ++ G I + AP + E++
Sbjct: 122 I-DANIKLYENSEIVVHQLETPLDIVEYSLKISKKLGKTTILNP----APAKSMSDEIIK 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D L PNE+EL L G+P + E I +A K GV++++V LG+KG A++V+ EK
Sbjct: 177 NVDYLIPNETELELLAGVPVKNKEDILKACRKIMAKGVKKLIVTLGSKG-AIYVD-EKGS 234
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
K+ + +DTT AGD+F +G+ E+ + FAA ++ V +GA S+P
Sbjct: 235 KEFGVYKVDAVDTTAAGDSFIGGLTAAISKGEPLEKAMEFAAKVGAITVTREGAQTSLPT 294
Query: 367 RKSVLNL 373
V+N
Sbjct: 295 LDEVINF 301
>gi|339637678|emb|CCC16639.1| ribokinase [Lactobacillus pentosus IG1]
Length = 307
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 10/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ I R+P GET+ A GGKGANQA A+L F+ VG
Sbjct: 4 VTVIGSNMIDLTTYIGRMPVEGETIEAPEFNIGYGGKGANQAIAAARLGSDVNFITMVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ G+R D + + G +G A + + N I+I+ G N P
Sbjct: 64 DGFGQEQLANYQKNGIRTDGIGI---GHQNSGVAPIFVDPSSDNRILIIKGANKELTPAV 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE ++K + +++LQ+EI N A+ GVPV+ + + + + ++ +
Sbjct: 121 L-DEKQALIKNSKLIVLQQEISLETNYHAIDLAQQFGVPVLLNPAPANEDLNIDYVSKVA 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+PNE+EL LTG+PT + ++I A GV+ +++ LG KG+ E
Sbjct: 180 FFTPNETELATLTGLPTTNLDEIKVAARDLISRGVENLIITLGHKGALWVTENHA----E 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGD+F SFA F +GK+ + L+ A A++ V KG S P
Sbjct: 236 IVPGMKVKAVDTTGAGDSFIGSFAHYFAQGKAIPDALKHANQYAAMTVMKKGTQKSYPTA 295
Query: 368 KSVLNLLQYA 377
+ +LL A
Sbjct: 296 AELSDLLAAA 305
>gi|422676252|ref|ZP_16735584.1| carbohydrate kinase, PfkB [Pseudomonas syringae pv. aceris str.
M302273]
gi|330973958|gb|EGH74024.1| carbohydrate kinase, PfkB [Pseudomonas syringae pv. aceris str.
M302273]
Length = 294
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 148/298 (49%), Gaps = 15/298 (5%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG DA G+ +
Sbjct: 1 MDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGADAYGEQLR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP---EKFGDED 194
AL + + VV+ GV TG A +++ ++ QN+I+IV G N P E+F
Sbjct: 61 AALLAEQIDCQAVTVVE--GVSTGIASIVVDANSQNAIVIVAGGNGRLTPALIERFD--- 115
Query: 195 LEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPN 254
++ + IV+ Q E+P AR+ G VI + P+P ID L PN
Sbjct: 116 -ALLADSQIVICQLEVPTETVFHTLARARALGKTVILNPAPASEPLPASWYALIDYLIPN 174
Query: 255 ESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAA 314
ESE LTG+ DS A G + V++ LG +G+ LF IPA
Sbjct: 175 ESEAQTLTGVNVDSPAAAENAASAMLAAGARNVIITLGERGT-LFASAS---GMEHIPAR 230
Query: 315 RV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
RV +DTT AGDTF FA G + +RF AAA++ V GA PS+P + V
Sbjct: 231 RVQAVDTTAAGDTFVGGFAAALSAGHGELQAIRFGQAAAAISVTRAGAQPSIPTFEEV 288
>gi|332289585|ref|YP_004420437.1| ribokinase [Gallibacterium anatis UMN179]
gi|330432481|gb|AEC17540.1| ribokinase [Gallibacterium anatis UMN179]
Length = 306
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 161/310 (51%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D +++ P+ GET++ + + GGKGANQA A+L F+ +GE
Sbjct: 4 LTVLGSINADHVIQVPHFPQPGETLSGQNYHIVYGGKGANQAVAAARLGAKVDFIACIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
D G + A G+ + + ++ G TG A++ + G+NSI+I G N
Sbjct: 64 DKIGLEMKQAFQKDGINTESIATIQ--GETTGIAMIQVTDSGENSIVISAGANAHLTTDI 121
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
+KF + L+ A +L+Q E P I K A+ AG + + A +P ELL
Sbjct: 122 VDKFKQKILD----ADALLMQLETPLDAIIYATKIAKQAGKHTVLNPAPAKA-LPDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + ++A H+ GV VL+ LGAKG +F+
Sbjct: 177 QLTMITPNETEAELLTGVKVVDEQSAAQAAAVFHQKGVAIVLITLGAKG--VFISHNAL- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
Q IIP RV DTT AGDTF + +E KS EE ++FA AAA++ V GA S+
Sbjct: 234 -QKIIPGFRVQAKDTTAAGDTFNGALVTALLEQKSLEEAIQFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLL 374
P R+ L+ L
Sbjct: 293 PSRQETLDFL 302
>gi|257899995|ref|ZP_05679648.1| carbohydrate kinase [Enterococcus faecium Com15]
gi|257837907|gb|EEV62981.1| carbohydrate kinase [Enterococcus faecium Com15]
Length = 307
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 162/304 (53%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + ++PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTKMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIEGAATGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVRKNKELITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ ++ + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHDSLVAAAEKMHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + + +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLGNLKEAILYGNLASSIAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|303229969|ref|ZP_07316743.1| ribokinase [Veillonella atypica ACS-134-V-Col7a]
gi|302515335|gb|EFL57303.1| ribokinase [Veillonella atypica ACS-134-V-Col7a]
Length = 295
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 150/303 (49%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +GE
Sbjct: 4 IVVIGSCNMDIVVLADKRPAAGETIMGNELHIAHGGKGANQAVAAARLGAEVTMVGCIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G++I D L + DY+ V + T H + ++G NSII++ G N +
Sbjct: 64 DAYGQMILDNLKENHINTDYIVTVPNTTTGTAHITL---AEGDNSIIVIAGANAKV-DQS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 VVDNAWSAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPA-ADLNPEWLELAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P + E+ A K +++V LG++G +GE
Sbjct: 179 YITPNEHELSAL--YPNKTTEETLLANEK-------KIIVTLGSQGVGYADDGEI----H 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 226 IVPGFKVEPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTK 285
Query: 368 KSV 370
V
Sbjct: 286 DEV 288
>gi|345850087|ref|ZP_08803089.1| ribokinase [Streptomyces zinciresistens K42]
gi|345638392|gb|EGX59897.1| ribokinase [Streptomyces zinciresistens K42]
Length = 297
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 165/306 (53%), Gaps = 17/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D+ +++ P+ GETV + +T+ GGKGANQA A+ +G VG
Sbjct: 4 IVVLGSTNMDLVTYVEKAPQRGETVPGRELRTIPGGKGANQAIAAARAGGTVSMIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + L GV D + DG P+G A +++ ++G N+I++V G N +
Sbjct: 64 DAFGTRLRSTLEHSGVDTDDLR-TADG--PSGTAHIVVDAEGGNAIVVVPGANGTLDHLS 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
GDE V+ A +LLQ EIP + A+AAR GV + P+P ELL +D
Sbjct: 121 PGDEG--VIASASTLLLQLEIPLPAVLAGARAARRHGVRTVLTPSPAQ-PLPGELLAAVD 177
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L PNE E LTG TD E + + V +V+V LGA G G +P+
Sbjct: 178 LLVPNEHEAAVLTGR-TDPREAAGALLDR-----VPEVVVTLGAAGCLYAARGAEPLT-- 229
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+PA V +DTTGAGDTF + AV EG+ + LR+AAAAA+L VQ +GA SMP R
Sbjct: 230 -VPAPEVTAVDTTGAGDTFVGALAVASGEGRPMPDALRWAAAAAALSVQREGATVSMPYR 288
Query: 368 KSVLNL 373
+ L
Sbjct: 289 PEIDEL 294
>gi|339450906|ref|ZP_08654276.1| ribokinase [Leuconostoc lactis KCTC 3528]
Length = 311
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 164/328 (50%), Gaps = 31/328 (9%)
Query: 53 RRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAA 112
R DQN N +VV+GS N D +++ R+P VGET+A T GGKGANQA
Sbjct: 2 REDQNE------NMTKKIVVLGSLNVDSIMKMPRMPLVGETMALTDVTTAPGGKGANQAV 55
Query: 113 CGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ 172
A+ F+G VG+D NG + L+ V D + + VPTG A +MLQ +G
Sbjct: 56 AAARQGAQVAFIGAVGQDNNGHFMRQTLADQAV--DVAAIQTNATVPTGSAYIMLQDNGA 113
Query: 173 NSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
N+I+I GG N + D D E++ +A ++ Q E+P +V K A++ V + +
Sbjct: 114 NTILIHGGANQAL---TVDDLDEELIAQADTLIAQFEVPLAVITAAFKMAKAHNVQTVLN 170
Query: 233 AGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDS----YEQISEAVVKCHKMGVQQVL 288
+ L N DI+ PNE+E LTG+ ++ Q+S+A++ GV + +
Sbjct: 171 PAPAVYEVTPTLANLTDIILPNETEAQLLTGITVENDRAVLNQVSDAILAT---GVARSI 227
Query: 289 VKLGAKGSALFVEG-----EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSR-EE 342
+ LG GS +G KP K + +DTT AGDTF + A S +
Sbjct: 228 ITLGEAGS-FIADGANRWWAKPKKVA------AVDTTAAGDTFIGTLASELAADFSNLVD 280
Query: 343 CLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+ A+ A+++ V GAIPS+P R+ V
Sbjct: 281 AVDRASTASAIAVTRPGAIPSIPTREEV 308
>gi|26989181|ref|NP_744606.1| ribokinase [Pseudomonas putida KT2440]
gi|24984020|gb|AAN68070.1|AE016439_5 ribokinase [Pseudomonas putida KT2440]
Length = 302
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 149/296 (50%), Gaps = 5/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V RLP+ GET+ + T+ GGKGANQA A+L +G VG+
Sbjct: 5 VVVVGSLNMDLVVRAQRLPRAGETLPGDSFFTVPGGKGANQAVAVARLGGSVAMIGNVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ D V + +G A++ + + QN I+I+ G N P+
Sbjct: 65 DDYGRQLHRALYVEGI--DCQGVSTCPAMSSGVALITVDAASQNCIVIIPGANGLLTPQS 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++ A +++ Q E+P S G VI + P+P + ID
Sbjct: 123 VRRFD-ALLQAAEVIICQLEVPASTVAWTLARGHELGKQVILNPAPATGPLPADWFAHID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNESE LTG+ + A + ++G +V++ LGA+G AL V + +
Sbjct: 182 YLTPNESEAEALTGVVVTDQDSARRAGERLLQLGAGKVIITLGAQG-ALLVTAQGH-QHY 239
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF FA G V G E + F AA+L V GA PS+P
Sbjct: 240 PAPHVQPLDTTAAGDTFIGGFAAGLVRGLEEGEAIAFGQRAAALSVTRAGAQPSIP 295
>gi|260662395|ref|ZP_05863290.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
gi|260553086|gb|EEX26029.1| ribokinase [Lactobacillus fermentum 28-3-CHN]
Length = 306
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 156/310 (50%), Gaps = 13/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + R P+ GET++A + GGKGANQA A+ T F+G VG
Sbjct: 5 IAVLGSINVDTTYHVARFPEPGETLSATEKSSAPGGKGANQAVAAARSGAQTTFIGMVGA 64
Query: 130 DANGKLITDALSGCGVRLDYM-NVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G+ + +AL GV ++ N V+ G TG A+V L ++GQN I++ GG N +
Sbjct: 65 DNEGRFMREALQEDGVDTQFVGNDVRHG---TGTALVTLDANGQNDIMVYGGANQAMTTA 121
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D ++ + ++ Q E P V + K A+ GV I + +P LL
Sbjct: 122 VLDRTD-DLWDQVDFLVSQFETPQEVTLAAFKLAKEHGVTTILNPAPAKEILPG-LLAVT 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D+++PNE+E LTG+ + +++ GV LV LG++G+ G K
Sbjct: 180 DVIAPNETESALLTGIEINDEADLAKTADYFRGQGVATTLVTLGSRGAYFNHNG----KS 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEG-KSREECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF ++ + + +A A+SL VQ GA+PS+P
Sbjct: 236 GIVPAFKVKAVDTTAAGDTFIGGLVSQLTPSMENLADAITYAQRASSLTVQRMGAMPSIP 295
Query: 366 DRKSVLNLLQ 375
R V L+
Sbjct: 296 TRAQVEEALK 305
>gi|379719286|ref|YP_005311417.1| ribokinase [Paenibacillus mucilaginosus 3016]
gi|378567958|gb|AFC28268.1| ribokinase [Paenibacillus mucilaginosus 3016]
Length = 302
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 153/306 (50%), Gaps = 13/306 (4%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + VVGS N D+ V + R+P+VGETV + GGKGANQA A+L +G V
Sbjct: 4 PRIAVVGSLNMDLVVSMPRMPQVGETVHGTDIHYIPGGKGANQAVGCARLGAEVSMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G+ + + L G+ L ++ + PTG A + ++ N I +V G N C P
Sbjct: 64 GSDHFGREMLERLQEEGIDLGGVHTAEG---PTGTAAIFHTAE-DNCIAVVPGANAYCTP 119
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQEL 244
E + E ++ A ++L+Q E+P + + AR AGV + + AP +P L
Sbjct: 120 ELV-ERHRERIESADVLLVQLEVPLDTVHRALEIARQAGVRTVLNP----APAKVLPAPL 174
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ DIL+PNE+E L+G S E + ++ + V++ G GS+ EGE+
Sbjct: 175 LSLADILTPNETEFALLSGEQDTSEEVLRRVMIAWQQDYGHTVILTRGRLGSSWLDEGER 234
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ +P +DTTGAGD F A+ G G ++ FA AAS+ V GA M
Sbjct: 235 LRTEPALP-VETVDTTGAGDAFNAALCFGLASGWDLQQAADFACRAASVSVTRFGAQAGM 293
Query: 365 PDRKSV 370
P + V
Sbjct: 294 PRLEEV 299
>gi|28869568|ref|NP_792187.1| ribokinase [Pseudomonas syringae pv. tomato str. DC3000]
gi|213970502|ref|ZP_03398629.1| ribokinase [Pseudomonas syringae pv. tomato T1]
gi|301384167|ref|ZP_07232585.1| ribokinase [Pseudomonas syringae pv. tomato Max13]
gi|302063992|ref|ZP_07255533.1| ribokinase [Pseudomonas syringae pv. tomato K40]
gi|302132650|ref|ZP_07258640.1| ribokinase [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28852810|gb|AAO55882.1| ribokinase [Pseudomonas syringae pv. tomato str. DC3000]
gi|213924673|gb|EEB58241.1| ribokinase [Pseudomonas syringae pv. tomato T1]
Length = 306
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 157/306 (51%), Gaps = 9/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 VVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGASVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + AL + + VV+ GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGQQLRAALLAECIDCQAVTVVE--GVSTGIASIVVDANSQNAIVIVAGGNGRLTPAL 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + IV+ Q E+P AR+ G VI + P+P ID
Sbjct: 123 IERFD-ALLAGSEIVICQLEVPTETVFHTLSRARALGKTVILNPAPASEPLPASWYGLID 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNESE LTG+ DS +A + G + V++ LG +G+ LF
Sbjct: 182 YLIPNESEAQTLTGVNVDSAASAEQAAMAMLAAGARNVIITLGERGT-LFANAAGVEH-- 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA RV +DTT AGDTF FA G+ + +RF AAA++ V GA PS+P
Sbjct: 239 -IPARRVQAVDTTAAGDTFVGGFAAALAAGQGESQAIRFGQAAAAISVTRAGAQPSIPTF 297
Query: 368 KSVLNL 373
+ V L
Sbjct: 298 EEVQEL 303
>gi|422336951|ref|ZP_16417923.1| ribokinase [Aggregatibacter aphrophilus F0387]
gi|353345503|gb|EHB89794.1| ribokinase [Aggregatibacter aphrophilus F0387]
Length = 310
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 163/309 (52%), Gaps = 9/309 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D +++ R K GET++ + GGKGANQA A+L F+
Sbjct: 5 LVVLGSINVDHVIQVPRFVKAGETLSGSHYRITYGGKGANQAVAAARLKAQNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D GK + +A + G+ + + +++ +G A++ + G+NSI+I G N +
Sbjct: 65 IGHDDIGKAMKNAFAQDGINVTPIRQIENE--MSGIAMIQVAESGENSIVIAAGAN-AYL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +E E +++A +L+Q E + A A+ VI + + +PQ LL
Sbjct: 122 DESLVEEQAENIRQADALLMQLETRLAAICYAADIAKQHHTKVILNPAPAN-TLPQTLLA 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + + A K H GVQ VL+ LGAKG + + I
Sbjct: 181 NLYMITPNETEAEILTGIKVEDEAGAARAAEKLHHWGVQIVLITLGAKGVYVSENNQGQI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ A+ DTT AGDTF + V +EGKS + +RFA AAA++ V GA PS+P+
Sbjct: 241 IEGFRVTAK--DTTAAGDTFNGALVVSLLEGKSLTDAIRFAHAAAAISVTRAGAQPSIPN 298
Query: 367 RKSVLNLLQ 375
R L+ L+
Sbjct: 299 RAETLDFLE 307
>gi|377556282|ref|ZP_09785996.1| Ribokinase [Lactobacillus gastricus PS3]
gi|376168583|gb|EHS87334.1| Ribokinase [Lactobacillus gastricus PS3]
Length = 306
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 152/299 (50%), Gaps = 11/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + R P+ GET++A + + GGKGANQA A+ TYF+G VG
Sbjct: 5 VAVLGSLNVDTTYRVVRFPEPGETISAISRSSAPGGKGANQAVAAARSGAKTYFIGSVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GKL+ + L + ++ D G TG A+V L +GQN+I++ GG N +
Sbjct: 65 DDEGKLMRECLDDERIYTAHLTTNMDHG--TGTALVTLNEEGQNNIMVYGGANQAMTTSV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V + ++ Q E P +V ++ K A++ V I + IP EL ++D
Sbjct: 123 LDGTD-QVFEDVDFMIAQFETPQAVTLEAFKRAKAHQVVTILNPAPASQLIP-ELAQYVD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + MG+ VL+ LG +G V +
Sbjct: 181 VIAPNETEAELLTGVKLTDEASLDLIAQHFQAMGIPVVLITLGKRG----VYYATKDQAG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEG-KSREECLRFAAAAASLCVQVKGAIPSMP 365
I+PA V +D T AGDTF + A + +E + +A A+SL VQ GA+PS+P
Sbjct: 237 IVPAFTVTAVDPTAAGDTFIGALASQLSTSLDNLDEAITYAQRASSLTVQKYGAMPSIP 295
>gi|254227589|ref|ZP_04921020.1| ribokinase [Vibrio sp. Ex25]
gi|262395638|ref|YP_003287491.1| ribokinase [Vibrio sp. Ex25]
gi|451976136|ref|ZP_21927305.1| ribokinase [Vibrio alginolyticus E0666]
gi|151939631|gb|EDN58458.1| ribokinase [Vibrio sp. Ex25]
gi|262339232|gb|ACY53026.1| ribokinase [Vibrio sp. Ex25]
gi|451929928|gb|EMD77653.1| ribokinase [Vibrio alginolyticus E0666]
Length = 305
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 159/306 (51%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLKADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G I + + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DSFGINIRENFNMDGI--DITGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DL+ +++A +L+Q E P + A+ A+ A VI + AP + ELL
Sbjct: 122 I-EPDLDRIRQADYLLMQLETPMCGIEKAARVAKDAKTNVILNP----APARELSDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L G
Sbjct: 177 CIDVITPNETEAEVLTGVTVTDNDSAQEAANVLHSKGIEIVMITLGAKGVWLSQNG---- 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ +IP RV DTT AGDTF +F G +E E ++FA AAA++ V GA S+
Sbjct: 233 RGELIPGFRVDATDTTAAGDTFNGAFVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSV 370
P R+ V
Sbjct: 293 PTREEV 298
>gi|157960347|ref|YP_001500381.1| ribokinase [Shewanella pealeana ATCC 700345]
gi|157845347|gb|ABV85846.1| ribokinase [Shewanella pealeana ATCC 700345]
Length = 307
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 16/306 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L+V+GS N D +++ P+ GET+ Q + GGKGANQA A+L F+ VG+
Sbjct: 6 LIVLGSVNADHVLQVPSFPRPGETLHGHNYQVIPGGKGANQAVAAARLGGDIGFIACVGD 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ I + G+ + ++++++ PTG A++ + G+NSI I N + E
Sbjct: 66 DSFGQNIRQTFTNDGMDISAVHMIEN--TPTGIAMIQVSDCGENSICIAAEANNALTAEI 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
++ ++++A +L+Q E P + A A+ G V+ + AP +P LL
Sbjct: 124 V-EQHSAMIEQAEYLLMQLETPLAGIELAASIAKVHGTQVVLNP----APARSLPDALLA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E LTG+ + ++A H G+ V++ LGAKG L +
Sbjct: 179 MVDIITPNETEAEVLTGVAVTDADSAAKAAQVLHDKGIATVMITLGAKGVYL----SEQD 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IIP +V DTT AGDTF +F G +EGK+ E + FA AA++ V GA S+
Sbjct: 235 TGKIIPGFKVKATDTTAAGDTFNGAFVTGLLEGKAIENAIVFAHGAAAISVTRFGAQTSI 294
Query: 365 PDRKSV 370
P R V
Sbjct: 295 PSRDEV 300
>gi|414596495|ref|ZP_11446070.1| Sugar kinase, ribokinase family [Leuconostoc citreum LBAE E16]
gi|390482957|emb|CCF28131.1| Sugar kinase, ribokinase family [Leuconostoc citreum LBAE E16]
Length = 304
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P GET+A T GGKGANQA A+ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLEGETMALTDVTTAPGGKGANQAVAAARQGAEVSFIGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D V +G VPTG A +MLQ G N+I+I GG N +
Sbjct: 65 DANGQFMRATLLTNGVNVDA--VTTNGDVPTGSAYIMLQDSGANTILIHGGANQAL---T 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D ++ A ++ Q E+P V I K A++ GV I + + EL+ D
Sbjct: 120 VADLDKTMIADADTLIAQFEVPLDVIIAAFKVAKANGVQTILNPAPAVYDLTPELMAVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVV-KCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE+E L+G+ ++ E + V GV + ++ LG GS +G+K +
Sbjct: 180 IILPNETEAQLLSGLTVENDEAVLNRVSDDLLSQGVSRSVITLGDAGS-FVADGQK--RW 236
Query: 309 SIIP-AARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
P + +DTT AGDTF + A S ++ + A+ A+++ V GAIPS+P
Sbjct: 237 WAKPNKVKAVDTTAAGDTFIGTLATVIAPDFSNLDDAIHRASVASAIAVTRAGAIPSIPT 296
Query: 367 RKSV 370
V
Sbjct: 297 SDEV 300
>gi|387770286|ref|ZP_10126469.1| ribokinase [Pasteurella bettyae CCUG 2042]
gi|386904648|gb|EIJ69437.1| ribokinase [Pasteurella bettyae CCUG 2042]
Length = 306
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 10/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + K GET+ GGKGANQA A+L F+G +G
Sbjct: 4 LTVLGSINADHVISVPYFAKPGETLIGSHYHIAYGGKGANQAVAAARLGANVSFIGCIGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + A + + +K TG A++ + G+NSI+I G N +C E
Sbjct: 64 DDIGRAMKTAFEQDNINTQPIKTIKTE--MTGIAMIQVAESGENSIVISAGAN-ACLDES 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E + + +A +L+Q E P I A+ A+ G ++ + A +P ELL +
Sbjct: 121 TVTEFEDEIARANCLLMQLETPLPAIILAAQIAKDNGTEIVLNPAPARA-LPDELLRLLH 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ + +A H+ G++ VL+ LG+KG + GE
Sbjct: 180 MITPNETEAEILTGIKVVDQDTAVKAASVFHQKGIENVLITLGSKGVFVSQNGEG----E 235
Query: 310 IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +DTT AGDTF + +E K +E +RFA AAA++ V +GA PS+P+R
Sbjct: 236 IVPGFCVNAVDTTAAGDTFNGALVTAILEDKPLQEAIRFAHAAAAISVTRQGAQPSIPNR 295
Query: 368 KSVLNLLQ 375
+ L+ L+
Sbjct: 296 QETLDFLE 303
>gi|340751193|ref|ZP_08688016.1| ribokinase [Fusobacterium mortiferum ATCC 9817]
gi|229421714|gb|EEO36761.1| ribokinase [Fusobacterium mortiferum ATCC 9817]
Length = 307
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 168/305 (55%), Gaps = 10/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ R PK GET+ + + GGKGANQA KL +G+VG+
Sbjct: 4 VVVVGSINMDLVTRCKRAPKGGETLFGEEFFQVPGGKGANQAVAIGKLGTEVTMLGKVGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ GK + +++ GV Y +++G TG A ++++ +GQN I++V G N S +
Sbjct: 64 DSFGKDLINSMKESGVDARY---IEEGEKSTGIAKIIVEENGQNRILVVAGAN-SEVDKA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D L+V+K+ IV+ Q EIP + V +AKA + ++ A + + E++
Sbjct: 120 YIDRYLDVIKECDIVVAQLEIPVEIVAYALAKAKEFGKMTILNPAPARE--LDDEIIKNS 177
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D++ PNESEL +TGMPT++ E+I +A K MGV ++V LG+KGS L + E
Sbjct: 178 DLIIPNESELALITGMPTETEEEIKKAGEKLLDMGVSNLIVTLGSKGS-LHLNREVCEFH 236
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
S + IDTT AGD+F V ++ + E + FA +++ V KGA S+P +
Sbjct: 237 SAYK-VKAIDTTAAGDSFIGGL-VRELKDNNVGEAIEFATKVSAIAVTRKGAQTSIPTIE 294
Query: 369 SVLNL 373
V N
Sbjct: 295 EVENF 299
>gi|294139406|ref|YP_003555384.1| ribokinase [Shewanella violacea DSS12]
gi|293325875|dbj|BAJ00606.1| ribokinase [Shewanella violacea DSS12]
Length = 304
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 165/307 (53%), Gaps = 9/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D +++ P+ G+T+ AK Q +AGGKGANQA AKL + +G
Sbjct: 4 LSVLGSINVDHLMQVGAAPRGGQTIQAKQYQIVAGGKGANQAVAAAKLGADVAMIACIGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + L+ G+ D + G TG A++ ++ G+N I I G N S E
Sbjct: 64 DAIGEQMKQGLADIGI--DTKGITTITGENTGVAMIYVEDSGENRIGIWPGANASL-TET 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ + ++LLQ E P + AK A++AG V+ + A +P+ LL+ +D
Sbjct: 121 VMSEHKASIQDSDLLLLQLETPVETLVAAAKIAKAAGTRVVLNPAPAKA-LPEALLSNVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCH-KMGVQQVLVKLGAKGSALFVEGE-KPIK 307
I++PNE+E +LTG+ A K H K G++ VL+ LG +G L +GE K I
Sbjct: 180 IITPNETEAEQLTGVAISELSDADMAANKLHTKFGIETVLITLGERGVWLSHKGEGKHIA 239
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++ A IDTT AGDTF F G +EG+S + +RF AAA+L V GA S+P R
Sbjct: 240 GFVMQA---IDTTAAGDTFNGGFVTGLLEGQSMLDSVRFGQAAAALSVTRMGAQSSIPTR 296
Query: 368 KSVLNLL 374
L LL
Sbjct: 297 VETLALL 303
>gi|375133298|ref|YP_005049706.1| ribokinase [Vibrio furnissii NCTC 11218]
gi|315182473|gb|ADT89386.1| ribokinase [Vibrio furnissii NCTC 11218]
Length = 305
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 164/309 (53%), Gaps = 22/309 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNV--VK-DGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
D+ G I ++ +LD MN+ VK PTG A++ + G+NSI I N
Sbjct: 64 DSFGINIRESF-----KLDGMNIRGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
E D DL+ ++ A +L+Q E P ++ A+ A+ A VI + AP +P
Sbjct: 119 AEAI-DPDLQHIRDANYLLMQLETPLDGIVKAAQVAKEARTNVILNP----APARELPDA 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL+ +D+++PNE+E LTG+ A H G++ V++ LGAKG L G
Sbjct: 174 LLSCVDVITPNETEAEVLTGITVTDDASAQLAADALHLKGIEIVMITLGAKGVWLSQNG- 232
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ ++IP RV DTT AGDTF + G +E E ++FA AAA++ V GA
Sbjct: 233 ---RGTLIPGFRVQATDTTAAGDTFNGALVTGLLEEMPLESAIKFAHAAAAISVTRFGAQ 289
Query: 362 PSMPDRKSV 370
S+P+R+ V
Sbjct: 290 TSIPNREEV 298
>gi|421877789|ref|ZP_16309328.1| Sugar kinase, ribokinase family [Leuconostoc citreum LBAE C10]
gi|372556411|emb|CCF25448.1| Sugar kinase, ribokinase family [Leuconostoc citreum LBAE C10]
Length = 304
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P GET+A T GGKGANQA A+ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLEGETMALTDVTTAPGGKGANQAVAAARQGAEVSFIGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D V +G VPTG A +MLQ G N+I+I GG N +
Sbjct: 65 DANGQFMRATLLTNGVNVDA--VTTNGDVPTGSAYIMLQDSGANTILIHGGANQAL---T 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D ++ A ++ Q E+P V I K A++ GV I + + EL+ D
Sbjct: 120 VADLDKTMIADADTLIAQFEVPLDVIIAAFKVAKANGVQTILNPAPAVYDLTPELMAVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVV-KCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE+E L+G+ ++ E + V GV + ++ LG GS +G+K +
Sbjct: 180 IILPNETEAQLLSGLTVENDEAVLNRVSDDLLSQGVSRSVITLGDAGS-FVADGQK--RW 236
Query: 309 SIIP-AARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
P + +DTT AGDTF + A S ++ + A+ A+++ V GAIPS+P
Sbjct: 237 WAKPNKVKAVDTTAAGDTFIGTLATVIAPDFSNLDDAIHRASVASAIAVTRAGAIPSIPT 296
Query: 367 RKSV 370
V
Sbjct: 297 SDEV 300
>gi|399004576|ref|ZP_10707189.1| ribokinase [Pseudomonas sp. GM17]
gi|398129421|gb|EJM18789.1| ribokinase [Pseudomonas sp. GM17]
Length = 293
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 149/293 (50%), Gaps = 6/293 (2%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ +RLP+ GET+ ++ T++GGKGANQA A+L +G VG+DA G+ +
Sbjct: 1 MDLVTRAERLPRAGETLIGQSFATVSGGKGANQAVAAARLGAQVSMIGCVGDDAYGEQLR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
AL R+D V G +G A++++ QN+I+IV G N PE D +V
Sbjct: 61 SAL--LAERIDCQAVTVVSG-SSGVALIVVDDSSQNAIVIVAGGNGRLTPEVVSGFD-KV 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
++ A +++ Q E+P K R G VI + P+P + ID L PNESE
Sbjct: 117 LQAADVIICQLEVPLPTVGHSLKRGRELGKTVILNPAPASGPLPADWYASIDYLIPNESE 176
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVI 317
L+G+P DS A + G +V++ LGA+GS LF G + P + +
Sbjct: 177 AAALSGLPVDSLASAEAAAARLIAAGAGKVIITLGAQGS-LFANGTS-FEHFPAPKVKAV 234
Query: 318 DTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
DTT AGDTF FA GKS E +RF AA+L V GA PS+P V
Sbjct: 235 DTTAAGDTFVGGFAAALAAGKSEAEAIRFGQVAAALSVTRPGAQPSIPTLSDV 287
>gi|170016992|ref|YP_001727911.1| ribokinase family sugar kinase [Leuconostoc citreum KM20]
gi|169803849|gb|ACA82467.1| Sugar kinase, ribokinase family [Leuconostoc citreum KM20]
Length = 314
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P GET+A T GGKGANQA A+ F+G VG
Sbjct: 15 IVVLGSLNVDNIMKMPRMPLEGETMALTDVTTAPGGKGANQAVASARQGAEVSFIGAVGS 74
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D V +G VPTG A +MLQ G N+I+I GG N +
Sbjct: 75 DANGQFMRATLLTNGVNVDA--VTTNGDVPTGSAYIMLQDSGANTILIHGGANQAL---T 129
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D ++ A ++ Q E+P V I K A++ GV I + + EL+ D
Sbjct: 130 VADLDKTMIADADTLIAQFEVPLDVIIAAFKVAKANGVQTILNPAPAVYDLTPELMAVTD 189
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVV-KCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE+E L+G+ ++ E + V GV + ++ LG GS +G+K +
Sbjct: 190 IILPNETEAQLLSGLTVENDEAVLNRVSDDLLSQGVSRSVITLGDAGS-FVADGQK--RW 246
Query: 309 SIIP-AARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
P + +DTT AGDTF + A S ++ + A+ A+++ V GAIPS+P
Sbjct: 247 WAKPNKVKAVDTTAAGDTFIGTLATVIAPDFSNLDDAIHRASVASAIAVTRAGAIPSIPT 306
Query: 367 RKSV 370
V
Sbjct: 307 SDEV 310
>gi|421190466|ref|ZP_15647767.1| ribokinase family sugar kinase [Oenococcus oeni AWRIB422]
gi|421192405|ref|ZP_15649671.1| ribokinase family sugar kinase [Oenococcus oeni AWRIB548]
gi|399969522|gb|EJO03856.1| ribokinase family sugar kinase [Oenococcus oeni AWRIB548]
gi|399969901|gb|EJO04215.1| ribokinase family sugar kinase [Oenococcus oeni AWRIB422]
Length = 313
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 159/305 (52%), Gaps = 13/305 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++LP+ GET+ + GGK ANQA A+ F+G VG
Sbjct: 13 IVVLGSLNVDAIQHLNKLPERGETIHLNGLTSAPGGKEANQAVAAARQGADVSFIGAVGN 72
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + LS + + ++ K VPTG A +ML++DG N+I++ GG NM E
Sbjct: 73 DANGRFMKQTLSDNKIDVSHIVTKK---VPTGSAYIMLEADGNNTILVYGGANMQVSVED 129
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++ A ++ Q E P + ++ + A+ V I + P+ LL+ D
Sbjct: 130 VRAAS-SLIESADAIITQFETPVTAAVEAFEIAKRKDVLTILNPAPAQKIDPK-LLSISD 187
Query: 250 ILSPNESELGRLTGMPTD-SYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNESE L + E ++ A + K+GV+ L+ LG GS + G+ ++
Sbjct: 188 FVTPNESEAQVLIDQKVQFTKESLNNAALSFEKLGVKNTLITLGEHGS-FYKFGQ---QE 243
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
IIP+ +V +DTT AGDTF SF S + L +A ++SL VQ GA+PS+P
Sbjct: 244 GIIPSFKVKAVDTTAAGDTFIGSFTANLKPDLSNLTDALTWATRSSSLTVQKAGALPSIP 303
Query: 366 DRKSV 370
+ V
Sbjct: 304 TFEEV 308
>gi|418464853|ref|ZP_13035792.1| ribokinase [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359756808|gb|EHK90965.1| ribokinase [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 310
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L F+
Sbjct: 5 LVVLGSVNADHVIRVPRFARAGETLRGAGYRIAYGGKGANQAVAAARLKDQNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G + A + G+ M ++ TG A++ + G+NSI+I G N +C
Sbjct: 65 IGNDDIGHAMKSAFASDGINTATMTQIEQE--MTGIAMIQVADSGENSIVISAGAN-ACL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S A+ A+ G VI + A +P+EL +
Sbjct: 122 DEHIVSRYAAHIQQADALLMQLETPLSAICLAAQIAQQQGTKVILNPAPAQA-LPEELFH 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + ++A K H+ G+Q VL+ LGAKG + G+ I
Sbjct: 181 RLYMITPNETEAEILTGIKVEDEISAAQAAEKLHQFGMQIVLITLGAKGVYVSENGQGKI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
A+ DTT AGDTF + +EGK+ + +RFA AAA++ V +GA PS+P
Sbjct: 241 IGGFRVKAK--DTTAAGDTFNGALVAALLEGKTLTDAIRFAHAAAAIGVTREGAQPSIPH 298
Query: 367 RKSVLNLL 374
R L+ L
Sbjct: 299 RAETLDFL 306
>gi|337746037|ref|YP_004640199.1| ribokinase [Paenibacillus mucilaginosus KNP414]
gi|336297226|gb|AEI40329.1| ribokinase [Paenibacillus mucilaginosus KNP414]
Length = 312
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 154/305 (50%), Gaps = 10/305 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + VVGS N DI V + R+P VGETV + GGKGANQAA A+L +G V
Sbjct: 11 PKIAVVGSLNMDIVVSMARMPLVGETVQGSAVHYIPGGKGANQAAGAARLGAEVKMIGSV 70
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G + D+L GV + ++++ GV TG A + L + N I++V G N C
Sbjct: 71 GSDIFGTQLVDSLRAFGVDTEAIDMLP--GVETGTATI-LHTREDNCIVVVPGANAHCSA 127
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ ++++A ++L+Q E+P + ARSAGV I + P+P ++L+
Sbjct: 128 DAVRHHH-ALIEQADLLLVQLEVPLDTVREALSIARSAGVRTILNPAPA-VPLPADILSL 185
Query: 248 IDILSPNESELGRLTGMPTDSYEQ-ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
DIL+PNE+EL L+ P +Q + E + ++ +V+V GA GS+ E +
Sbjct: 186 ADILTPNETELALLSNQPVAETDQALMEQLAYWRELHEGRVVVTRGAIGSSYL---EAGV 242
Query: 307 KQSIIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
Q++ P +V DTTGAGD F + G + FA ASL V GA +P
Sbjct: 243 LQTVKPLKVKVADTTGAGDAFNGALGYCIAAGLPFRTAVDFACRTASLSVTKFGAQGGLP 302
Query: 366 DRKSV 370
V
Sbjct: 303 TWSEV 307
>gi|349687762|ref|ZP_08898904.1| heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
[Gluconacetobacter oboediens 174Bp2]
Length = 327
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 150/311 (48%), Gaps = 12/311 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D ++R + GET+ S T GGKGANQA A+L G
Sbjct: 19 PHIAVIGSTNIDFVAHVERFAQPGETLHVHASTTGLGGKGANQAIAVARLGQDVALAGWT 78
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D + L GV D +++D TG A + + G+N I++ GG NM+
Sbjct: 79 GTDMLATMARTTLQQAGV--DTHCLMEDPAADTGRAFITINHAGENQILVDGGANMAHGA 136
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP-IPQELLN 246
E V+ A +V++Q E+ ++ + +A+ AR G+PV+ D + A +P EL
Sbjct: 137 EACPLLS-PVLDHATLVMMQMEMCHALVLAMARTARERGIPVMLDPAPVPARGLPAELYP 195
Query: 247 FIDILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI++PNE E LTG+ PTD + A + H G + ++KLG +G V P
Sbjct: 196 LADIITPNERETRDLTGIEPTDETTALQAAQI-LHARGTRTAIIKLGHRG----VVYSAP 250
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
Q + RV IDT AGD F A A G + E +RFAAA +L GA +
Sbjct: 251 DAQGFVSPFRVRAIDTVAAGDCFNAGLASALARGAAIGEAVRFAAACGALATTRPGAAQA 310
Query: 364 MPDRKSVLNLL 374
P V +LL
Sbjct: 311 APTMDEVADLL 321
>gi|167746924|ref|ZP_02419051.1| hypothetical protein ANACAC_01636 [Anaerostipes caccae DSM 14662]
gi|167653884|gb|EDR98013.1| putative ribokinase [Anaerostipes caccae DSM 14662]
Length = 639
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 147/304 (48%), Gaps = 12/304 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + VVGS N D Y+ + +LP G+TV++ TS GGKG NQ+ AKL H +G V
Sbjct: 327 PKITVVGSINIDTYLNVPQLPHSGKTVSSSTSFVYPGGKGINQSIGAAKLGHRVTLIGNV 386
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D + + +AL GV + V + TG A + ++S G + I I+ G N P
Sbjct: 387 GSDIDSASVYNALKEYGV--ESFGVKRCNQEKTGQAFIFVESSGHSMISILSGANNILTP 444
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E K G L+Q EIP + + A G I + IP E+L+
Sbjct: 445 EDIRKRK-RFFKNTGYCLIQSEIPLDTVAEACRIAHECGAKTILKP-SVCGFIPSEVLSG 502
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL-FVEGEKPI 306
+DIL PNE EL + P S + E + G++ ++V LG G + + EK
Sbjct: 503 VDILVPNEEELNEIC--PAQS--TLQEKTAALLEYGIETIIVTLGENGCYVRTADLEKHF 558
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
P+ +D TGA D F ++ A + G S EE +R A AA C+ +G +PS+ D
Sbjct: 559 PAVPFPS---VDNTGASDAFISALAAYLLYGYSLEEAVRIATYAAGFCISREGVVPSLID 615
Query: 367 RKSV 370
++S+
Sbjct: 616 KRSL 619
>gi|116617905|ref|YP_818276.1| ribokinase family sugar kinase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381336382|ref|YP_005174157.1| ribokinase family sugar kinase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|116096752|gb|ABJ61903.1| Sugar kinase, ribokinase family [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|356644348|gb|AET30191.1| ribokinase family sugar kinase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 313
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 151/305 (49%), Gaps = 12/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D IDRLP GET+ + GGKGANQA A+ +G VG+
Sbjct: 5 VVVIGSLNIDTIQMIDRLPNQGETITVNNQASTFGGKGANQAVAAARQGADVTMIGAVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ LS G+ DY+ TG A +ML+ DG N+I++ GG NM+
Sbjct: 65 DDRGRAFKQLLSDEGISTDYIFTKSQ---FTGSATIMLEPDGHNTIMVYGGANMNLTSAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ ++ A +++ Q E+P + A+ GV I + + + + +++ D
Sbjct: 122 V-EKARNIIANADVIVAQLEVPTEAIVAGFNIAKENGVLTILNPAPITSHLDSNIISSTD 180
Query: 250 ILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++ PNE+E L PT ++ K +K+G V+V LG+ G V G
Sbjct: 181 LIIPNETEAAALAHTEPTTKQSSLTPLTSKLNKVGFSNVVVTLGSDGVYYHVNGSA---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
I+P +V +DTT AGDTF +F+ + S +R + A+S+ V GAI S+P
Sbjct: 237 DILPVFKVNAVDTTAAGDTFIGTFSANIDDNLSNLPSVIRRSCFASSIAVSRSGAIASIP 296
Query: 366 DRKSV 370
++K V
Sbjct: 297 NKKDV 301
>gi|330991627|ref|ZP_08315578.1| Ribokinase [Gluconacetobacter sp. SXCC-1]
gi|329761646|gb|EGG78139.1| Ribokinase [Gluconacetobacter sp. SXCC-1]
Length = 312
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 151/313 (48%), Gaps = 20/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + R + GET+ S T GGKGANQA A+L G G
Sbjct: 6 IAVIGSTNIDFVMHVTRFARPGETMHVHASSTGLGGKGANQAMAVARLGQAVALAGWTGR 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + L G GV D +++D TG A + + G+N I++ GG NM+
Sbjct: 66 DMLASMARTTLEGAGV--DTRWLLEDAATGTGRAFITINRAGENQILVDGGANMAHTDTS 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-----AGGMDAPIPQEL 244
L + AG+V+LQ E+ ++ I VA+ AR+ +PV+ D AGG +P EL
Sbjct: 124 L-PLLLPALDGAGMVMLQMEMDPTLMIAVARHARAHAIPVMLDPAPVPAGG----LPDEL 178
Query: 245 LNFIDILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
DIL+PNE E LTG+ P D ++ A + H+ GV ++KLG +G V
Sbjct: 179 CRLADILTPNERETAALTGIEPKDETTALAAARI-LHERGVSTAIIKLGHRG----VVYS 233
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
P Q IP RV IDT AGD F A A V G + +R AAA +L GA
Sbjct: 234 APGAQGFIPPFRVHAIDTVAAGDCFNAGLATAMVTGHPPAQAVRVAAACGALATTRAGAA 293
Query: 362 PSMPDRKSVLNLL 374
+ P V L+
Sbjct: 294 QAAPTMADVTALM 306
>gi|449495734|ref|XP_002186799.2| PREDICTED: ribokinase [Taeniopygia guttata]
Length = 309
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 161/309 (52%), Gaps = 17/309 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS D+ RLPK GET+ GGKGANQ A+L T + +VG
Sbjct: 5 VVVVGSCMTDLVSLTTRLPKAGETIIGHKFFVGFGGKGANQCVQSARLGAKTSLICKVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G D L G+ ++ D TG A +++ S+GQN I+IV G N+
Sbjct: 65 DSFGNDYVDNLKKNGISTAFVGQTTDAA--TGTASIIVNSEGQNVIVIVPGANL-----L 117
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
EDL +V+ KA +V+ Q EI +V+++ K AR++GV +F+ A + +
Sbjct: 118 LNFEDLKRASDVICKAKVVVCQLEITPAVSLEALKMARASGVKTLFNPAPALADLDPQFY 177
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ DI NE+E LTG+P + E + + G + V+V LGA+G + + G++P
Sbjct: 178 TYSDIFCCNETEAEILTGIPVGNLEDAEKVGRMLLERGCKLVIVTLGAEG-CMMISGDEP 236
Query: 306 IKQSIIPAARV--IDTTGAGDTFTA--SFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
I + + PA +V +DTTGAGD+F +F + + S EE +R + AS+ VQ G
Sbjct: 237 IPKHV-PAGKVRAVDTTGAGDSFVGALAFYLAYYPTLSMEEMIRKSNCVASVSVQAPGTQ 295
Query: 362 PSMPDRKSV 370
S P RK +
Sbjct: 296 SSYPYRKDL 304
>gi|326318856|ref|YP_004236528.1| ribokinase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323375692|gb|ADX47961.1| ribokinase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 326
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 153/315 (48%), Gaps = 8/315 (2%)
Query: 57 NPVPKNPINTPPP-LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGA 115
P P+ P + PP + VVGS N DI + + R P GETV A + + GGKG NQA A
Sbjct: 6 RPAPEIPSRSAPPRIAVVGSLNMDIVLRVPRAPGAGETVMADSLHHIPGGKGGNQAVACA 65
Query: 116 KLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSI 175
+ + +G+VG DA+G + AL +D+ V D PTG A + ++S QN I
Sbjct: 66 RQGAHVHLLGRVGHDAHGAALRAALD--ADAIDHAGVQTDAEAPTGIACITVESTAQNRI 123
Query: 176 IIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGG 235
++VGG N E ++ A +LLQ E+P + A+ A G PV+ +
Sbjct: 124 VVVGGANARF--EIDAQALGAALQGASSLLLQFEVPMPQVMAAARQAHQRGCPVVLNPSP 181
Query: 236 MDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG 295
M PIP L +D L NE E ++ E + A G +QV+V LGA G
Sbjct: 182 MQ-PIPDALWPLVDTLVANEVEAALFADCDVETPEDAAHAARLLRARGPRQVVVTLGAAG 240
Query: 296 SALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCV 355
A+ +G + + +DTT AGDTF + V G+S + ++ AA+LCV
Sbjct: 241 -AVACDGNG-CRHHLGLRVDAVDTTAAGDTFLGALTVALARGESLDLAVQTGVRAAALCV 298
Query: 356 QVKGAIPSMPDRKSV 370
GA PS+P R V
Sbjct: 299 TRPGAQPSIPTRAEV 313
>gi|184156165|ref|YP_001844505.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|227515299|ref|ZP_03945348.1| ribokinase [Lactobacillus fermentum ATCC 14931]
gi|183227509|dbj|BAG28025.1| ribokinase [Lactobacillus fermentum IFO 3956]
gi|227086359|gb|EEI21671.1| ribokinase [Lactobacillus fermentum ATCC 14931]
Length = 306
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 156/310 (50%), Gaps = 13/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + R P+ GET++A + GGKGANQA A+ T F+G VG
Sbjct: 5 IAVLGSINVDTTYHVARFPEPGETLSATDKSSAPGGKGANQAVAAARSGAQTTFIGMVGA 64
Query: 130 DANGKLITDALSGCGVRLDYM-NVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G+ + +AL GV ++ N V+ G TG A+V L ++GQN I++ GG N +
Sbjct: 65 DNEGRFMREALQEDGVDTQFVGNDVRHG---TGTALVTLDANGQNDIMVYGGANQAMTTA 121
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D ++ + ++ Q E P V + K A+ GV I + +P LL
Sbjct: 122 VLDRTD-DLWDQVDFLVSQFETPQEVTLAAFKLAKEHGVTTILNPAPAKEILPG-LLAVT 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D+++PNE+E LTG+ + +++ GV LV LG++G+ G K
Sbjct: 180 DVIAPNETESALLTGIEINDEADLAKTADYFRGQGVATTLVTLGSRGAYFNHNG----KS 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEG-KSREECLRFAAAAASLCVQVKGAIPSMP 365
I+PA +V +DTT AGDTF ++ + + +A A+SL VQ GA+PS+P
Sbjct: 236 GIVPAFKVKAVDTTAAGDTFIGGLVSQLTPSMENLADAITYAQRASSLTVQGMGAMPSIP 295
Query: 366 DRKSVLNLLQ 375
R V L+
Sbjct: 296 TRAQVEEALK 305
>gi|218779468|ref|YP_002430786.1| ribokinase [Desulfatibacillum alkenivorans AK-01]
gi|218760852|gb|ACL03318.1| ribokinase [Desulfatibacillum alkenivorans AK-01]
Length = 544
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 151/301 (50%), Gaps = 7/301 (2%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVG+ N D+ ++RLP +GET+ K GGKGANQA AKL VG
Sbjct: 2 TGPKICVVGACNIDLISYVERLPVLGETLHGKKFSMGFGGKGANQAVMAAKLGGEVAMVG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
++G D G+ GV + +++ ++ +G A + + +G NSIIIV G +
Sbjct: 62 KLGRDVFGENTLANFKKLGVNVSHVHFTEEA--FSGVAPIAVDDNGANSIIIVTGASDLL 119
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
E+ + + K+ +++ Q EIP N++ + AR VP IF+ +P EL
Sbjct: 120 SAEEIRAAE-NAIAKSKVLVCQLEIPMEQNLEALRIARKNNVPTIFNPAPARPGLPDELY 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEGEK 304
DI PNESE LTGMP ++ EQ +A + G + V++ LG +G L G +
Sbjct: 179 QLSDIFCPNESETEILTGMPVETMEQAEQAAKALLERGPKTVILTLGERGCLLVDANGAR 238
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I + A IDTTGAGD F S A GKS E+ + A A++ V +G S
Sbjct: 239 HIPTRKVEA---IDTTGAGDCFVGSLAFFLAAGKSLEDAINRANKIAAVSVCGQGTQSSF 295
Query: 365 P 365
P
Sbjct: 296 P 296
>gi|366052528|ref|ZP_09450250.1| ribokinase [Lactobacillus suebicus KCTC 3549]
Length = 307
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 11/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +I R+P+ GET+ + AGGKGANQA + T F+G+VG+
Sbjct: 5 VVVLGSLNVDTIFKIPRMPQPGETLHLDEKSSSAGGKGANQAVAAVRNGAQTSFIGKVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G ++ L+ G+ ++ + G TG A ++L GQNSI++ GG N +
Sbjct: 65 DQQGTMMKAILAKEGININAIATEDQDG--TGSAAILLDRSGQNSILVYGGANQKIDQTE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++K A ++ Q E P +I+ K A+ AGV I + + I +LL + D
Sbjct: 123 IRSSQ-NLIKSADFLVTQFETPQLSSIEAFKIAKDAGVTTILNPAPA-STIEHKLLQYTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + + + +GV V++ +G +G+ P
Sbjct: 181 LIVPNETESASLTGIEVTNQSSMIASAKAFKTLGVNNVIITVGNRGAYY----STPAGHH 236
Query: 310 IIPAARVI--DTTGAGDTFTASFAVGFVEGK-SREECLRFAAAAASLCVQVKGAIPSMPD 366
+ A RV+ DTTGAGDTF + + + + +A A+S+ VQ GAIPS+P
Sbjct: 237 FMSAYRVVATDTTGAGDTFIGALCSRLQPNLVNLPDAVDYAQRASSIAVQTLGAIPSIPT 296
Query: 367 RKSVLNLLQ 375
VL+ ++
Sbjct: 297 ESQVLDAIK 305
>gi|339480887|ref|ZP_08656546.1| ribokinase family sugar kinase [Leuconostoc pseudomesenteroides
KCTC 3652]
Length = 307
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 158/305 (51%), Gaps = 23/305 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA A+ F+G +G
Sbjct: 8 IVVLGSLNVDSIMKMPRMPLVGETMALTNVTTAPGGKGANQAVAAARQGADVSFIGAIGN 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D + +G VPTG A +MLQ DG N+I+I GG N +
Sbjct: 68 DANGQFMRATLVNNGVNVDQLK--TNGDVPTGSAFIMLQDDGANTILIHGGANQAL---T 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D +++ A +++ Q E+P +V + + A + V + + + EL+ D
Sbjct: 123 TADLDHDLIIDADLIIAQFEVPYAVILAAFELAHNHHVQTVLNPAPAVYELTPELMAVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKC-HKMGVQQVLVKLGAKGSAL-------FVE 301
I+ PNE+E LTG+ + E + V G ++ ++ LGA GS + + +
Sbjct: 183 IILPNETEAQLLTGIEVVNDEGVLNRVTDALQAKGAKRSIITLGAAGSFVADGQRRWWAQ 242
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGA 360
EK + Q DTT AGDTF + A S ++ ++ A+ A+++ V GA
Sbjct: 243 PEKVVAQ---------DTTAAGDTFIGTLASVIASDFSNLDDAVKRASIASAIAVTRPGA 293
Query: 361 IPSMP 365
IPS+P
Sbjct: 294 IPSIP 298
>gi|380031518|ref|YP_004888509.1| deoxyribokinase [Lactobacillus plantarum WCFS1]
gi|342240761|emb|CCC77995.1| deoxyribokinase [Lactobacillus plantarum WCFS1]
Length = 307
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 154/310 (49%), Gaps = 10/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ I R+P GET+ A GGKGANQA A+L F+ VG
Sbjct: 4 VTVIGSNMIDLTTYIGRMPVEGETIEAPEFNIGYGGKGANQAIAAARLGSDVNFITMVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ G+R D + + G +G A + + N I+I+ G N P
Sbjct: 64 DGFGQEQLANYQKNGIRTDGIGI---GHQNSGVAPIFVDPSSDNRILIIKGANKELTPAV 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE ++K + +++LQ+EI N A+ GVPV+ + + + + ++ +
Sbjct: 121 L-DEKQALIKNSKLIVLQQEISLETNYHAIDLAQQFGVPVLLNPAPANKNLNIDYVSKVV 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+PNE+EL LTG+PT++ ++I A GV+ +++ LG KG+ E
Sbjct: 180 FFTPNETELATLTGLPTNNLDEIKVAACDLISRGVENLIITLGHKGALWVTENHA----E 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGD+F SFA F +G++ + L+ A A++ V KG S P
Sbjct: 236 IVPGMKVKAVDTTGAGDSFIGSFAHYFAQGEAIPDALQHANQYAAMTVMKKGTQKSYPTA 295
Query: 368 KSVLNLLQYA 377
+ +LL A
Sbjct: 296 AELSDLLAAA 305
>gi|170026413|ref|YP_001722918.1| ribokinase [Yersinia pseudotuberculosis YPIII]
gi|169752947|gb|ACA70465.1| ribokinase [Yersinia pseudotuberculosis YPIII]
Length = 308
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 162/311 (52%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV + GGKGANQA + F+ VG+
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVIGQQYNVAFGGKGANQAVAAGRSGADIAFIACVGD 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L+ + + +K G TG A++ + SDG+N I I G N + PE
Sbjct: 66 DDIGERVRQQLTADKIDTQPIEAIK--GATTGVALIFVNSDGENVIGINAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V+ A +L+Q E P I AK A+ VI + AP +P ELL
Sbjct: 124 LRRYQQQVI-DADALLMQLESPLDTVIAAAKLAKQHQTQVILNP----APARKLPDELLT 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + ++A H G+ V++ LG++G L +G
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAAKAAQILHDKGITTVIITLGSRGVWLSEQG---- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K ++ +V +DT AGDTF + +EG+S + +RFA AAA++ V GA PS+
Sbjct: 235 KGKLVAGFKVNAVDTIAAGDTFNGALLTALLEGQSMDVAVRFAHAAAAIAVTRPGAQPSI 294
Query: 365 PDRKSVLNLLQ 375
P R + + LQ
Sbjct: 295 PWRAEIDSFLQ 305
>gi|384083589|ref|ZP_09994764.1| ribokinase [gamma proteobacterium HIMB30]
Length = 306
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 154/313 (49%), Gaps = 20/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVG 128
+VV GSAN DI +++ LPK+GET + GGKG NQA ++LSH F+G VG
Sbjct: 3 VVVFGSANVDISIDVRSLPKLGETKQGSDYRIGLGGKGLNQAVAASRLSHSLVQFIGAVG 62
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G + L+ GV + +D PTG A++ + DG NSI + GG N+S
Sbjct: 63 TDHFGSFLESELAALGVATS--GIRRDPTRPTGMALIHVDRDGHNSITVSGGANLSWTTS 120
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN-- 246
D + + L Q E P V +++ K +A I D APIP+E ++
Sbjct: 121 HISDLAFD---GTTVGLCQLETPFDVTVEILKRLSNADALTILDP----APIPEEAIDEI 173
Query: 247 --FIDILSPNESELGRLTGMPT-DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+DIL+PN+ E RL +S E + A+ + G + V++ +G +G A E
Sbjct: 174 FPVVDILTPNQHEAERLLNRRILNSKEAVQGAIALVKRGGFKAVIITMGEQGVAY---SE 230
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ +PA +V IDT AGD F + A V G S E + FA AAA+L V +GA
Sbjct: 231 NGTDGNWLPAFQVDTIDTVAAGDCFNGALAASIVNGVSFRESVVFAMAAAALSVTKEGAS 290
Query: 362 PSMPDRKSVLNLL 374
S+P V L
Sbjct: 291 SSVPSLVEVQEFL 303
>gi|337755983|ref|YP_004648494.1| ribokinase [Francisella sp. TX077308]
gi|336447588|gb|AEI36894.1| Ribokinase [Francisella sp. TX077308]
Length = 313
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 5/297 (1%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VVVGSAN D+ V++D+L + G+T+ ++ + GGKGANQA +L F+ +G
Sbjct: 9 SVVVVGSANRDLVVKVDQLAQKGQTIISQNYEEFCGGKGANQAVAARRLGENVTFITNLG 68
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D+ G + + G LD + + +D G TG A + + + GQN I +V G N + +
Sbjct: 69 KDSFGDRLLEFYKKEG--LDSLTINQDSGSNTGLAFICVDNQGQNIINVVMGAN-AKLDQ 125
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D+ + +++A I+L Q E P +A ++ A + +PQELL +
Sbjct: 126 QILDKHNQKIQQAKIILTQLETPLETIEYLANKITDKQTFILNPAPARE--LPQELLKKV 183
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DIL+PNE+E L+G+ +A + H GV V+V LG +G+ L + K
Sbjct: 184 DILTPNETEASILSGIEVKDVNTAKQAAKELHNKGVSTVIVTLGEQGALLSKNNGQEQKL 243
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
V+DTT AGDTF A +G S E+ + A AA+L V ++GA S P
Sbjct: 244 FATKKVDVVDTTAAGDTFNGVLAFCLDKGLSIEQSIEIANTAAALAVTIEGAEDSAP 300
>gi|268531892|ref|XP_002631074.1| Hypothetical protein CBG02845 [Caenorhabditis briggsae]
Length = 312
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 149/294 (50%), Gaps = 3/294 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS D+ DR P+ GE+V ++ +GGKGANQA A+L +G VGE
Sbjct: 6 IVVLGSIVQDLVSYTDRFPRPGESVRGNDFKSGSGGKGANQAVAAARLGANVAMIGLVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G L+ GV + K+ T A + + + +NSI++ G N+ PE
Sbjct: 66 DMFGDSNIKGLTENGVDTSCVGKTKESHTAT--ATITVNKEAENSIVVTLGANLFLTPE- 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + ++ + +V+ Q EI + N + + AR V + DA + + +L+ +D
Sbjct: 123 VADANSSIISNSKMVMCQGEIDEKGNRRAFEIARKNKVITFLNPAPGDANMDKTILDLVD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ NE+E +TG+P ++ E +A V+ KMG Q ++ LGAKG L +G I+
Sbjct: 183 IICTNENEAEFITGIPQNNVEDAKKAAVEMVKMGPQHAIITLGAKGVLLASKGHNEIEHI 242
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ IDTTGAGD F +FA V G S + +R AA A+L V G S
Sbjct: 243 SVDNVEAIDTTGAGDCFCGTFAAHHVAGVSMIDSIRSAAKIAALSVTRHGTQSS 296
>gi|187933721|ref|YP_001885721.1| ribokinase [Clostridium botulinum B str. Eklund 17B]
gi|187721874|gb|ACD23095.1| ribokinase [Clostridium botulinum B str. Eklund 17B]
Length = 309
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 170/317 (53%), Gaps = 28/317 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ ++I +PK GET+ +K+ + + GGKGANQA + + ++G+
Sbjct: 4 ICVLGSMNMDLVMKIKDMPKPGETILSKSYEKIPGGKGANQAVAAKRSGAYVSMIAKIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + D L + +D V +D TG A++M+ G NSII+ G+NMS EK
Sbjct: 64 DDYGRTLRDELKNDDINIDC--VFEDDSNATGTAMIMVADTGNNSIIVNPGSNMSI-NEK 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D L+ +K++ I++ Q E P+ ++++ K A+ I + AP I ELL
Sbjct: 121 EIDSTLDRIKESDILIAQFETPEEMSLRAFKNAKENEKITILNP----APAKKIKDELLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSAL----FVEG 302
DI+ PNE+E LTG+ ++ E +A GV+ V++ +G+KG+A+ F E
Sbjct: 177 VTDIIVPNETEAEVLTGITVENVEDAKKAAKVFMDKGVKFVIITMGSKGAAVIGKDFCE- 235
Query: 303 EKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECL----RFAAAAASLCVQ 356
++PA +V IDTT AGD+F + + +E L +F +S+ VQ
Sbjct: 236 -------LVPAYKVNAIDTTAAGDSFIGGLSTKLNPNEITKENLLMSVKFGNMVSSIAVQ 288
Query: 357 VKGAIPSMPDRKSVLNL 373
+GA PS+P ++ V+ +
Sbjct: 289 REGAQPSIPYKEEVIKV 305
>gi|303230410|ref|ZP_07317171.1| ribokinase [Veillonella atypica ACS-049-V-Sch6]
gi|302514949|gb|EFL56930.1| ribokinase [Veillonella atypica ACS-049-V-Sch6]
Length = 294
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +G+
Sbjct: 4 IVVIGSCNMDIVVLADKRPTAGETIMGNELHIAHGGKGANQAVATARLGAEVTMVGCIGQ 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G++I D L + DY+ + D T H + ++G NSII++ G N +
Sbjct: 64 DAYGQMILDNLKENHINTDYIVTIPDTTTGTAHITL---AEGDNSIIVIAGANAKV-DQS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 VVDNAWSAIEQADLVMVQNEIPIPTIEYIVRRCHEAQVKVLLNPAPA-ADLNPEWLELAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P S E+ A +++V LG++G GE
Sbjct: 179 YITPNEHELSSL--YPNQSTEETLLA-------NENKIIVTLGSQGVGYADNGEI----R 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 226 IVPGFKVEPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQKLGAQGGMPTK 285
Query: 368 KSV 370
V
Sbjct: 286 DEV 288
>gi|254252399|ref|ZP_04945717.1| Ribokinase [Burkholderia dolosa AUO158]
gi|124895008|gb|EAY68888.1| Ribokinase [Burkholderia dolosa AUO158]
Length = 309
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 138/297 (46%), Gaps = 6/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D + TG A++++ QN+I+IV G N PE
Sbjct: 71 DAHGAALRAGLEAEGI--DCTGLATSASASTGVALIVVDDASQNAIVIVAGGNGEVTPET 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 VARHE-AALAAADVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPSGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFVEGEKPIKQ 308
L PNE E LTG+P A G + VL+ LGA+G AL +G +
Sbjct: 188 YLIPNEVEAAALTGLPVRDPADAHAAAHALQAAGARNVLITLGARGVFALTADGAA--RH 245
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P R +DTT AGDTF FA G + +RFA AA+L V GA PS+P
Sbjct: 246 YAAPVVRAVDTTAAGDTFIGGFAAQLAAGAELDAAIRFAQRAAALSVTRAGAQPSIP 302
>gi|115351396|ref|YP_773235.1| ribokinase [Burkholderia ambifaria AMMD]
gi|115281384|gb|ABI86901.1| ribokinase [Burkholderia ambifaria AMMD]
Length = 309
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 154/306 (50%), Gaps = 10/306 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
PP + VVGS N D+ RLP GET+ + QT+ GGKGANQA A+L +G
Sbjct: 7 PPRIAVVGSVNVDLVTRAPRLPVPGETLLGTSFQTVHGGKGANQAVAAARLGASVAMIGC 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G + DAL+ R+D ++ + G TG A + + + G NSI++V G N +C
Sbjct: 67 VGNDAFGARLHDALA--AERIDVTHLRRIDGEATGVATITVDAHGANSIVVVPGAN-ACV 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
D +V+ A +++ Q E+P + +A + PV+ + P+ LL
Sbjct: 124 DAALIDASRDVIAGAALMVCQLEVPIETVARAIGSAIAHRTPVLLNPAPAR-PLFDALLA 182
Query: 247 FIDILSPNESELGRLTGMPT-DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEGEK 304
ID L NE+E LTG+ D + A C K GV VLV LGA+G + G+
Sbjct: 183 RIDYLVVNETEAESLTGIAVGDDASAVRAADALCAK-GVGNVLVTLGARGVCWRGIAGQG 241
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ + A +DTT AGDTF FA G S ++ + F AA++ V GA S+
Sbjct: 242 RHRARAVVA---VDTTAAGDTFVGGFAAARASGASMDDAIAFGQHAAAISVTRHGAQTSI 298
Query: 365 PDRKSV 370
P R+ V
Sbjct: 299 PTREEV 304
>gi|260769520|ref|ZP_05878453.1| ribokinase [Vibrio furnissii CIP 102972]
gi|260614858|gb|EEX40044.1| ribokinase [Vibrio furnissii CIP 102972]
Length = 305
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 164/309 (53%), Gaps = 22/309 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNV--VK-DGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
D+ G I ++ +LD MN+ VK PTG A++ + G+NSI I N
Sbjct: 64 DSFGINIRESF-----KLDGMNIRGVKMQPNCPTGIAMIQVSDSGENSICISAEANAKLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
E D DL+ ++ A +L+Q E P ++ A+ A+ A VI + AP +P
Sbjct: 119 AEAI-DPDLQHIRDAKYLLMQLETPLDGIVKAAQVAKEARTNVILNP----APARELPDV 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL+ +D+++PNE+E LTG+ A H G++ V++ LGAKG L G
Sbjct: 174 LLSCVDVITPNETEAEVLTGITVSDDASAQLAADALHGKGIEIVMITLGAKGVWLSQNG- 232
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ ++IP RV DTT AGDTF + G +E E ++FA AAA++ V GA
Sbjct: 233 ---RGALIPGFRVQATDTTAAGDTFNGALVTGLLEEMPLESAIKFAHAAAAISVTRFGAQ 289
Query: 362 PSMPDRKSV 370
S+P+R+ V
Sbjct: 290 TSIPNREEV 298
>gi|206560025|ref|YP_002230789.1| putative ribokinase [Burkholderia cenocepacia J2315]
gi|421865173|ref|ZP_16296853.1| Ribokinase [Burkholderia cenocepacia H111]
gi|198036066|emb|CAR51960.1| putative ribokinase [Burkholderia cenocepacia J2315]
gi|358074636|emb|CCE47731.1| Ribokinase [Burkholderia cenocepacia H111]
Length = 309
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 142/303 (46%), Gaps = 4/303 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVTMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D + + TG A++++ QN+I+IV G N +
Sbjct: 71 DAHGAALRAGLEAEGI--DCIGLATSVSASTGVALIVVDDASQNAIVIVAGGNGEVTTDT 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P A R G V+ + AP+P+ L +D
Sbjct: 129 ITRHE-AALAAADVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPEGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P + A G + VLV LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTGLPVRDPAEAEAAARALQAGGARNVLVTLGARG-VLALTADGAARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF F+ G + +RFA AA+L V GA PS+P R
Sbjct: 247 PAPVVQAVDTTAAGDTFIGGFSARLAAGADVDAAIRFAQRAAALSVTRAGAQPSIPTRAE 306
Query: 370 VLN 372
+ +
Sbjct: 307 LAD 309
>gi|219849772|ref|YP_002464205.1| ribokinase [Chloroflexus aggregans DSM 9485]
gi|219544031|gb|ACL25769.1| ribokinase [Chloroflexus aggregans DSM 9485]
Length = 302
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 165/314 (52%), Gaps = 22/314 (7%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P ++VVGS N D+ V R P+ GET+ Q GGKGANQA A+L +G+V
Sbjct: 3 PTIIVVGSLNMDLVVRAPRHPQPGETLIGSDFQIFPGGKGANQAVAAARLGARVRMIGRV 62
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G DA G + DA GV Y V +D TG A++ L + GQN+I++ G NM
Sbjct: 63 GVDAFGDALLDAAQYDGVDTGY--VQRDPDAATGVALITLDAHGQNTIVVALGANM---- 116
Query: 188 EKFGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ + D++ + + A ++L+Q E P + + A GV V+ + P+P
Sbjct: 117 -RVSEADVQRAEALFQGADVLLMQLECPLDAVMAATELAHRYGVQVVLNPAPAR-PLPVA 174
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL+ ID L PN+ EL L TD ++ A+ + + GV+ +LV LG++G AL E
Sbjct: 175 LLSQIDYLLPNQLELQALAEGETD----LTAAIERLQRQGVRNLLVTLGSEG-ALLATAE 229
Query: 304 KPIKQSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ + +PA + V+DT AGD F +F V EGK E +R+ AA +L V GA
Sbjct: 230 ---QTTTVPAFQVPVVDTVAAGDAFAGAFCVALAEGKPPLEAVRWGNAAGALAVTRAGAQ 286
Query: 362 PSMPDRKSVLNLLQ 375
PS+P R V+ LL+
Sbjct: 287 PSLPSRMEVMRLLE 300
>gi|385786651|ref|YP_005817760.1| ribokinase [Erwinia sp. Ejp617]
gi|310765923|gb|ADP10873.1| ribokinase [Erwinia sp. Ejp617]
Length = 309
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 160/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + P+ GETV K Q GGKGANQA A+ F+ VGE
Sbjct: 7 LAVLGSINADHILNLAHFPRPGETVIGKQYQVAFGGKGANQAVAAARSGADMAFIACVGE 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I L+ R+D +V G TG A++ + +G+N+I I G N + PE+
Sbjct: 67 DDIGGRIRQQLAND--RIDVASVAVISGGATGVALIFVNGEGENTIGIYAGANAALTPER 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---ELLN 246
E + + +A ++L+Q E P + A+ A+ V+ + AP Q ELL
Sbjct: 125 V-LEHQQTIAQAQVLLMQLESPLDSVLAAARIAQHHHTRVVLNP----APATQLSDELLA 179
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E LTG+ +S E + A K H+ G+ VL+ LG++G L +G
Sbjct: 180 LVDIITPNETEAQILTGIAVNSDEDAARAAQKLHEKGIATVLITLGSRGVWLSEQGNG-- 237
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+PA V +DT AGDTF + +E + E +RFA AAA++ V A PS+
Sbjct: 238 --HCVPAFSVAAVDTIAAGDTFNGALMTALLEQRPMVEAVRFAHAAAAIAVTRHSAQPSV 295
Query: 365 PDRKSVLNLLQ 375
P R + + LQ
Sbjct: 296 PWRDEIDSFLQ 306
>gi|167627052|ref|YP_001677552.1| ribokinase [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|167597053|gb|ABZ87051.1| ribokinase, PfkB family [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 306
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 5/297 (1%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GSAN D+ V++D+L + G+T+ ++ + GGKGANQA +L F+ +G
Sbjct: 2 SVVVIGSANRDLVVKVDQLAQKGQTIISQNYEEFCGGKGANQAVAARRLGENVTFITNLG 61
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D+ G + + G LD + +D G TG A + + + GQN I +V G N + +
Sbjct: 62 KDSFGDRLLEFYKKEG--LDSSTINQDSGSNTGLAFICVDNQGQNIINVVMGAN-AKLDQ 118
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D+ + +++A I+L Q E P +A + ++ A + +PQELL +
Sbjct: 119 QILDKHNQKIQQAKIILTQLETPLETIEYLADKISDKQIFILNPAPARE--LPQELLKKV 176
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DIL+PNE+E L+G+ E +A + H GV V++ LG +G+ L + K
Sbjct: 177 DILTPNETEASILSGIEVKDIETAKQAAKELHNKGVSTVIITLGEQGALLSKNHGQEQKL 236
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
V+DTT AGDTF A +G S E+ + A AA+L V ++GA S P
Sbjct: 237 FATKKVDVVDTTAAGDTFNGVLAFCLDKGLSIEQSIEIANTAAALAVTIEGAEDSAP 293
>gi|329926636|ref|ZP_08281049.1| ribokinase [Paenibacillus sp. HGF5]
gi|328939177|gb|EGG35540.1| ribokinase [Paenibacillus sp. HGF5]
Length = 292
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GSA+ D+ V + P GETV + +T+ GGKGANQA A+L VG VG+
Sbjct: 4 IVVIGSASMDLVVTSAKRPGAGETVLGDSFKTVPGGKGANQAVAAARLGAEVTMVGCVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ I + L GV DY+ V G+ +G A ++L ++G NSI++V N P K
Sbjct: 64 DSFGETILNNLQSNGVITDYVEPVT--GMESGTAHIIL-AEGDNSIVVVKAANDRITP-K 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D+ + ++ A IVL+Q+EIP+ + V+ VP++ + P+P ++
Sbjct: 120 YVDQAEKAIQAADIVLIQQEIPEETVVHVSAICAKYQVPLMLNPAPAR-PVPSVVIERAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE E L E + + +++V G KG F +++
Sbjct: 179 YITPNEHEAAILFN---------DEPLGDVLRRYPNKLIVTEGKKGVRYF----DGMQEV 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++P +V +DTTGAGDTF +FAV EG S + LRFA AASL V GA MP R
Sbjct: 226 VVPGYKVEAVDTTGAGDTFNGAFAVALAEGMSMTDSLRFANRAASLSVMKFGAQGGMPSR 285
Query: 368 KSV 370
V
Sbjct: 286 LEV 288
>gi|163801642|ref|ZP_02195540.1| ribokinase [Vibrio sp. AND4]
gi|159174559|gb|EDP59361.1| ribokinase [Vibrio sp. AND4]
Length = 306
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 160/313 (51%), Gaps = 17/313 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADICFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I + G+ D V PTG A++ + G+NSI I N E
Sbjct: 64 DPFGINIRENFKLDGI--DITGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP + ELL+
Sbjct: 122 I-EPDLERIRQADYLLMQLETPMCGIEKAARIAKDAKTNVILNP----APARELSDELLS 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E LTG+ + EA H G++ V++ LGAKG L +
Sbjct: 177 CIDVITPNETEAEVLTGVKVTDNDSAREAANLLHSKGIEIVMITLGAKGVWL----SQNR 232
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
II RV IDTT AGDTF + G +EG E ++ A AAA++ V GA S+
Sbjct: 233 HGQIIAGFRVEAIDTTAAGDTFNGALVTGLLEGLPLESAIKLAHAAAAISVTRFGAQTSI 292
Query: 365 PDRKSVLNLL-QY 376
P RK V L QY
Sbjct: 293 PTRKEVEEFLAQY 305
>gi|430834587|ref|ZP_19452591.1| ribokinase [Enterococcus faecium E0679]
gi|430839636|ref|ZP_19457575.1| ribokinase [Enterococcus faecium E0688]
gi|430858663|ref|ZP_19476288.1| ribokinase [Enterococcus faecium E1552]
gi|430485053|gb|ELA61987.1| ribokinase [Enterococcus faecium E0679]
gi|430490623|gb|ELA67139.1| ribokinase [Enterococcus faecium E0688]
gi|430545034|gb|ELA85034.1| ribokinase [Enterococcus faecium E1552]
Length = 305
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 160/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLKKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +Q
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EQG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|22123930|ref|NP_667353.1| ribokinase [Yersinia pestis KIM10+]
gi|45439873|ref|NP_991412.1| ribokinase [Yersinia pestis biovar Microtus str. 91001]
gi|108806009|ref|YP_649925.1| ribokinase [Yersinia pestis Antiqua]
gi|108810174|ref|YP_645941.1| ribokinase [Yersinia pestis Nepal516]
gi|150260928|ref|ZP_01917656.1| ribokinase [Yersinia pestis CA88-4125]
gi|153949716|ref|YP_001399012.1| ribokinase [Yersinia pseudotuberculosis IP 31758]
gi|162420036|ref|YP_001604653.1| ribokinase [Yersinia pestis Angola]
gi|165926140|ref|ZP_02221972.1| ribokinase [Yersinia pestis biovar Orientalis str. F1991016]
gi|165939970|ref|ZP_02228507.1| ribokinase [Yersinia pestis biovar Orientalis str. IP275]
gi|166009591|ref|ZP_02230489.1| ribokinase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213342|ref|ZP_02239377.1| ribokinase [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401573|ref|ZP_02307067.1| ribokinase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167422853|ref|ZP_02314606.1| ribokinase [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167425521|ref|ZP_02317274.1| ribokinase [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167468629|ref|ZP_02333333.1| ribokinase [Yersinia pestis FV-1]
gi|218927229|ref|YP_002345104.1| ribokinase [Yersinia pestis CO92]
gi|229839853|ref|ZP_04460012.1| ribokinase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841934|ref|ZP_04462090.1| ribokinase [Yersinia pestis biovar Orientalis str. India 195]
gi|229896811|ref|ZP_04511974.1| ribokinase [Yersinia pestis Pestoides A]
gi|229904700|ref|ZP_04519811.1| ribokinase [Yersinia pestis Nepal516]
gi|270488409|ref|ZP_06205483.1| ribokinase [Yersinia pestis KIM D27]
gi|294502118|ref|YP_003566180.1| ribokinase [Yersinia pestis Z176003]
gi|384120600|ref|YP_005503220.1| ribokinase [Yersinia pestis D106004]
gi|384124477|ref|YP_005507091.1| ribokinase [Yersinia pestis D182038]
gi|384138011|ref|YP_005520713.1| ribokinase [Yersinia pestis A1122]
gi|384412714|ref|YP_005622076.1| ribokinase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420549363|ref|ZP_15047083.1| ribokinase [Yersinia pestis PY-01]
gi|420554739|ref|ZP_15051880.1| ribokinase [Yersinia pestis PY-02]
gi|420560374|ref|ZP_15056763.1| ribokinase [Yersinia pestis PY-03]
gi|420565740|ref|ZP_15061600.1| ribokinase [Yersinia pestis PY-04]
gi|420570760|ref|ZP_15066168.1| ribokinase [Yersinia pestis PY-05]
gi|420576439|ref|ZP_15071294.1| ribokinase [Yersinia pestis PY-06]
gi|420581734|ref|ZP_15076117.1| ribokinase [Yersinia pestis PY-07]
gi|420587143|ref|ZP_15081010.1| ribokinase [Yersinia pestis PY-08]
gi|420592228|ref|ZP_15085579.1| ribokinase [Yersinia pestis PY-09]
gi|420597592|ref|ZP_15090402.1| ribokinase [Yersinia pestis PY-10]
gi|420603304|ref|ZP_15095469.1| ribokinase [Yersinia pestis PY-11]
gi|420608691|ref|ZP_15100364.1| ribokinase [Yersinia pestis PY-12]
gi|420614088|ref|ZP_15105197.1| ribokinase [Yersinia pestis PY-13]
gi|420614394|ref|ZP_15105460.1| ribokinase [Yersinia pestis PY-14]
gi|420624741|ref|ZP_15114643.1| ribokinase [Yersinia pestis PY-15]
gi|420629688|ref|ZP_15119131.1| ribokinase [Yersinia pestis PY-16]
gi|420634891|ref|ZP_15123793.1| ribokinase [Yersinia pestis PY-19]
gi|420640167|ref|ZP_15128545.1| ribokinase [Yersinia pestis PY-25]
gi|420645585|ref|ZP_15133506.1| ribokinase [Yersinia pestis PY-29]
gi|420650943|ref|ZP_15138325.1| ribokinase [Yersinia pestis PY-32]
gi|420656538|ref|ZP_15143367.1| ribokinase [Yersinia pestis PY-34]
gi|420662002|ref|ZP_15148239.1| ribokinase [Yersinia pestis PY-36]
gi|420667316|ref|ZP_15153029.1| ribokinase [Yersinia pestis PY-42]
gi|420672212|ref|ZP_15157493.1| ribokinase [Yersinia pestis PY-45]
gi|420677540|ref|ZP_15162348.1| ribokinase [Yersinia pestis PY-46]
gi|420683129|ref|ZP_15167374.1| ribokinase [Yersinia pestis PY-47]
gi|420688501|ref|ZP_15172161.1| ribokinase [Yersinia pestis PY-48]
gi|420693808|ref|ZP_15176795.1| ribokinase [Yersinia pestis PY-52]
gi|420699518|ref|ZP_15181827.1| ribokinase [Yersinia pestis PY-53]
gi|420705506|ref|ZP_15186512.1| ribokinase [Yersinia pestis PY-54]
gi|420710657|ref|ZP_15191194.1| ribokinase [Yersinia pestis PY-55]
gi|420716190|ref|ZP_15196095.1| ribokinase [Yersinia pestis PY-56]
gi|420721738|ref|ZP_15200824.1| ribokinase [Yersinia pestis PY-58]
gi|420722070|ref|ZP_15201106.1| ribokinase [Yersinia pestis PY-59]
gi|420732652|ref|ZP_15210572.1| ribokinase [Yersinia pestis PY-60]
gi|420737646|ref|ZP_15215082.1| ribokinase [Yersinia pestis PY-61]
gi|420743136|ref|ZP_15220020.1| ribokinase [Yersinia pestis PY-63]
gi|420749058|ref|ZP_15224967.1| ribokinase [Yersinia pestis PY-64]
gi|420754279|ref|ZP_15229689.1| ribokinase [Yersinia pestis PY-65]
gi|420760511|ref|ZP_15234616.1| ribokinase [Yersinia pestis PY-66]
gi|420765408|ref|ZP_15239043.1| ribokinase [Yersinia pestis PY-71]
gi|420770674|ref|ZP_15243756.1| ribokinase [Yersinia pestis PY-72]
gi|420775640|ref|ZP_15248265.1| ribokinase [Yersinia pestis PY-76]
gi|420781277|ref|ZP_15253202.1| ribokinase [Yersinia pestis PY-88]
gi|420786903|ref|ZP_15258124.1| ribokinase [Yersinia pestis PY-89]
gi|420791910|ref|ZP_15262641.1| ribokinase [Yersinia pestis PY-90]
gi|420797484|ref|ZP_15267648.1| ribokinase [Yersinia pestis PY-91]
gi|420802584|ref|ZP_15272234.1| ribokinase [Yersinia pestis PY-92]
gi|420807915|ref|ZP_15277072.1| ribokinase [Yersinia pestis PY-93]
gi|420813338|ref|ZP_15281911.1| ribokinase [Yersinia pestis PY-94]
gi|420818761|ref|ZP_15286847.1| ribokinase [Yersinia pestis PY-95]
gi|420824147|ref|ZP_15291652.1| ribokinase [Yersinia pestis PY-96]
gi|420829200|ref|ZP_15296215.1| ribokinase [Yersinia pestis PY-98]
gi|420834797|ref|ZP_15301261.1| ribokinase [Yersinia pestis PY-99]
gi|420839723|ref|ZP_15305719.1| ribokinase [Yersinia pestis PY-100]
gi|420850587|ref|ZP_15315520.1| ribokinase [Yersinia pestis PY-102]
gi|420856351|ref|ZP_15320350.1| ribokinase [Yersinia pestis PY-103]
gi|420861409|ref|ZP_15324839.1| ribokinase [Yersinia pestis PY-113]
gi|421761431|ref|ZP_16198231.1| ribokinase [Yersinia pestis INS]
gi|21956664|gb|AAM83604.1|AE013601_8 ribokinase [Yersinia pestis KIM10+]
gi|45434728|gb|AAS60289.1| ribokinase [Yersinia pestis biovar Microtus str. 91001]
gi|108773822|gb|ABG16341.1| ribokinase [Yersinia pestis Nepal516]
gi|108777922|gb|ABG11980.1| ribokinase [Yersinia pestis Antiqua]
gi|115345840|emb|CAL18698.1| ribokinase [Yersinia pestis CO92]
gi|149290336|gb|EDM40413.1| ribokinase [Yersinia pestis CA88-4125]
gi|152961211|gb|ABS48672.1| ribokinase [Yersinia pseudotuberculosis IP 31758]
gi|162352851|gb|ABX86799.1| ribokinase [Yersinia pestis Angola]
gi|165912096|gb|EDR30736.1| ribokinase [Yersinia pestis biovar Orientalis str. IP275]
gi|165922000|gb|EDR39177.1| ribokinase [Yersinia pestis biovar Orientalis str. F1991016]
gi|165991513|gb|EDR43814.1| ribokinase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205640|gb|EDR50120.1| ribokinase [Yersinia pestis biovar Antiqua str. B42003004]
gi|166958245|gb|EDR55266.1| ribokinase [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167048955|gb|EDR60363.1| ribokinase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055535|gb|EDR65328.1| ribokinase [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229678818|gb|EEO74923.1| ribokinase [Yersinia pestis Nepal516]
gi|229691273|gb|EEO83326.1| ribokinase [Yersinia pestis biovar Orientalis str. India 195]
gi|229696219|gb|EEO86266.1| ribokinase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700249|gb|EEO88285.1| ribokinase [Yersinia pestis Pestoides A]
gi|262360196|gb|ACY56917.1| ribokinase [Yersinia pestis D106004]
gi|262364141|gb|ACY60698.1| ribokinase [Yersinia pestis D182038]
gi|270336913|gb|EFA47690.1| ribokinase [Yersinia pestis KIM D27]
gi|294352577|gb|ADE62918.1| ribokinase [Yersinia pestis Z176003]
gi|320013218|gb|ADV96789.1| ribokinase [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342853140|gb|AEL71693.1| ribokinase [Yersinia pestis A1122]
gi|391420210|gb|EIQ83018.1| ribokinase [Yersinia pestis PY-01]
gi|391420268|gb|EIQ83075.1| ribokinase [Yersinia pestis PY-02]
gi|391420320|gb|EIQ83126.1| ribokinase [Yersinia pestis PY-03]
gi|391435284|gb|EIQ96354.1| ribokinase [Yersinia pestis PY-04]
gi|391436724|gb|EIQ97654.1| ribokinase [Yersinia pestis PY-05]
gi|391440062|gb|EIR00666.1| ribokinase [Yersinia pestis PY-06]
gi|391452397|gb|EIR11802.1| ribokinase [Yersinia pestis PY-07]
gi|391452436|gb|EIR11840.1| ribokinase [Yersinia pestis PY-08]
gi|391454113|gb|EIR13355.1| ribokinase [Yersinia pestis PY-09]
gi|391467994|gb|EIR25908.1| ribokinase [Yersinia pestis PY-10]
gi|391468808|gb|EIR26649.1| ribokinase [Yersinia pestis PY-11]
gi|391470288|gb|EIR27970.1| ribokinase [Yersinia pestis PY-12]
gi|391484282|gb|EIR40567.1| ribokinase [Yersinia pestis PY-13]
gi|391485679|gb|EIR41796.1| ribokinase [Yersinia pestis PY-15]
gi|391500189|gb|EIR54714.1| ribokinase [Yersinia pestis PY-16]
gi|391500405|gb|EIR54909.1| ribokinase [Yersinia pestis PY-19]
gi|391502625|gb|EIR56902.1| ribokinase [Yersinia pestis PY-14]
gi|391505174|gb|EIR59207.1| ribokinase [Yersinia pestis PY-25]
gi|391516640|gb|EIR69511.1| ribokinase [Yersinia pestis PY-29]
gi|391517294|gb|EIR70114.1| ribokinase [Yersinia pestis PY-34]
gi|391517729|gb|EIR70503.1| ribokinase [Yersinia pestis PY-32]
gi|391530460|gb|EIR82038.1| ribokinase [Yersinia pestis PY-36]
gi|391533528|gb|EIR84792.1| ribokinase [Yersinia pestis PY-42]
gi|391535559|gb|EIR86619.1| ribokinase [Yersinia pestis PY-45]
gi|391548921|gb|EIR98668.1| ribokinase [Yersinia pestis PY-47]
gi|391549139|gb|EIR98872.1| ribokinase [Yersinia pestis PY-46]
gi|391549553|gb|EIR99251.1| ribokinase [Yersinia pestis PY-48]
gi|391563528|gb|EIS11835.1| ribokinase [Yersinia pestis PY-52]
gi|391564985|gb|EIS13140.1| ribokinase [Yersinia pestis PY-53]
gi|391567496|gb|EIS15353.1| ribokinase [Yersinia pestis PY-54]
gi|391579013|gb|EIS25195.1| ribokinase [Yersinia pestis PY-55]
gi|391580227|gb|EIS26249.1| ribokinase [Yersinia pestis PY-56]
gi|391590703|gb|EIS35384.1| ribokinase [Yersinia pestis PY-58]
gi|391594304|gb|EIS38470.1| ribokinase [Yersinia pestis PY-60]
gi|391608958|gb|EIS51404.1| ribokinase [Yersinia pestis PY-61]
gi|391609253|gb|EIS51666.1| ribokinase [Yersinia pestis PY-63]
gi|391609402|gb|EIS51798.1| ribokinase [Yersinia pestis PY-59]
gi|391609929|gb|EIS52277.1| ribokinase [Yersinia pestis PY-64]
gi|391622321|gb|EIS63259.1| ribokinase [Yersinia pestis PY-65]
gi|391623533|gb|EIS64307.1| ribokinase [Yersinia pestis PY-66]
gi|391632674|gb|EIS72172.1| ribokinase [Yersinia pestis PY-71]
gi|391634133|gb|EIS73443.1| ribokinase [Yersinia pestis PY-72]
gi|391644602|gb|EIS82580.1| ribokinase [Yersinia pestis PY-76]
gi|391647423|gb|EIS85052.1| ribokinase [Yersinia pestis PY-88]
gi|391651702|gb|EIS88844.1| ribokinase [Yersinia pestis PY-89]
gi|391657628|gb|EIS94120.1| ribokinase [Yersinia pestis PY-90]
gi|391665089|gb|EIT00710.1| ribokinase [Yersinia pestis PY-91]
gi|391674391|gb|EIT09001.1| ribokinase [Yersinia pestis PY-93]
gi|391674535|gb|EIT09130.1| ribokinase [Yersinia pestis PY-94]
gi|391674742|gb|EIT09327.1| ribokinase [Yersinia pestis PY-92]
gi|391688592|gb|EIT21793.1| ribokinase [Yersinia pestis PY-95]
gi|391690505|gb|EIT23530.1| ribokinase [Yersinia pestis PY-96]
gi|391692280|gb|EIT25139.1| ribokinase [Yersinia pestis PY-98]
gi|391705784|gb|EIT37291.1| ribokinase [Yersinia pestis PY-99]
gi|391706440|gb|EIT37874.1| ribokinase [Yersinia pestis PY-100]
gi|391721581|gb|EIT51487.1| ribokinase [Yersinia pestis PY-103]
gi|391721638|gb|EIT51542.1| ribokinase [Yersinia pestis PY-102]
gi|391722544|gb|EIT52338.1| ribokinase [Yersinia pestis PY-113]
gi|411177753|gb|EKS47765.1| ribokinase [Yersinia pestis INS]
Length = 308
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 162/311 (52%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV + GGKGANQA + F+ VG+
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVIGQQYNVAFGGKGANQAVAAGRSGADIAFIACVGD 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L+ + + +K G TG A++ + SDG+N I I G N + PE
Sbjct: 66 DDIGERVRQQLTADKIDTQPIEAIK--GATTGVALIFVNSDGENVIGINAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V+ A +L+Q E P I AK A+ VI + AP +P ELL
Sbjct: 124 LRRYQQQVI-DADALLMQLESPLDTVIAAAKLAKQHQTQVILNP----APARKLPDELLT 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + ++A H G+ V++ LG++G L +G
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAAKAAQILHDKGIATVIITLGSRGVWLSEQG---- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K ++ +V +DT AGDTF + +EG+S + +RFA AAA++ V GA PS+
Sbjct: 235 KGKLVAGFKVNAVDTIAAGDTFNGALLTALLEGQSMDVAVRFAHAAAAIAVTRPGAQPSI 294
Query: 365 PDRKSVLNLLQ 375
P R + + LQ
Sbjct: 295 PWRAEIDSFLQ 305
>gi|334881234|emb|CCB82071.1| ribokinase [Lactobacillus pentosus MP-10]
Length = 307
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 153/310 (49%), Gaps = 10/310 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ I R+P GET+ A GGKGANQA A+L F+ VG
Sbjct: 4 VTVIGSNMIDLTTYIGRMPVEGETIEAPEFNIGYGGKGANQAIAAARLGSDVNFITMVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ G+R D + + G +G A + + N I+I+ G N P
Sbjct: 64 DGFGQEQLANYQKNGIRTDGIGI---GHQNSGVAPIFVDPSSDNRILIIKGANKELTPAI 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE ++K + +++LQ+EI N A+ GVPV+ + + + + ++ +
Sbjct: 121 L-DEKQALIKNSKLIVLQQEISLETNYHAIDLAQQFGVPVLLNPAPANEDLNIDYVSKVA 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+PNE+EL LTG+PT + ++I A GV+ +++ LG KG+ E
Sbjct: 180 FFTPNETELATLTGLPTTNLDEIKVAARDLISRGVENLIITLGHKGALWVTENHA----E 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
I+P +V +DTTGAGD+F SFA F +G++ + L+ A A++ V KG S P
Sbjct: 236 IVPGMKVKAVDTTGAGDSFIGSFAHYFAQGEAIPDALKHANQYAAMTVMKKGTQKSYPTA 295
Query: 368 KSVLNLLQYA 377
+ +LL A
Sbjct: 296 AELSDLLAAA 305
>gi|152977884|ref|YP_001343513.1| ribokinase [Actinobacillus succinogenes 130Z]
gi|150839607|gb|ABR73578.1| ribokinase [Actinobacillus succinogenes 130Z]
Length = 310
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 161/315 (51%), Gaps = 22/315 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY----FVG 125
L V+GS N D + + K GET+ GGKGANQA A+L + F+G
Sbjct: 4 LTVLGSINADHVISVPYFAKPGETLTGSHYHIAYGGKGANQAVAAARLCDQSQMTVSFIG 63
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+GED G+ + A + G+ + + VKD TG A++ + + G+NSI+I G N
Sbjct: 64 CIGEDGIGRTMKQAFADDGINVAPIVEVKDE--TTGIAMIQVAATGENSIVISPGANAYL 121
Query: 186 WPE---KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
E +F DE + A +L+Q E P ++ A A+ G V+ + P+P
Sbjct: 122 NEEVVERFSDE----ITSADYLLMQLETPLPAIMKAAALAKKHGTKVVLNPAPAR-PLPD 176
Query: 243 ELLNFIDILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE 301
ELL DI++PNE+E LTG+ TD + A V H G++ VL+ LG+KG V
Sbjct: 177 ELLTNTDIITPNETEAEILTGVCVTDEQSAVKSAQV-FHDKGIETVLITLGSKG----VY 231
Query: 302 GEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
+ K I+ RV +DTT AGDTF +F ++GK+ + FA AAA+L V +G
Sbjct: 232 FSRQSKGGIVAGFRVRAVDTTAAGDTFNGAFLTALLDGKTMANAITFAHAAAALSVTREG 291
Query: 360 AIPSMPDRKSVLNLL 374
A PS+P R L L
Sbjct: 292 AQPSIPSRAETLRFL 306
>gi|78066219|ref|YP_368988.1| ribokinase [Burkholderia sp. 383]
gi|77966964|gb|ABB08344.1| Ribokinase [Burkholderia sp. 383]
Length = 309
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 137/296 (46%), Gaps = 4/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + +L G+ D + TG A++++ QN+I+IV G N E
Sbjct: 71 DAHGAALRASLEAEGI--DCAGLATSASASTGVALIVVDDASQNAIVIVAGGNGEVTTET 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 VARHE-AALASADVLICQLETPPEAVFAALSAGRRLGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LT +P + A G VLV LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTALPVRDPAEAEAAARVLQAGGACNVLVTLGARG-VLALTADGAARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA + +DTT AGDTF F+ G + +RFA AA+L V GA PS+P
Sbjct: 247 PAPAVQAVDTTAAGDTFIGGFSARLAAGADVDTAIRFAQRAAALSVTRAGAQPSIP 302
>gi|187927973|ref|YP_001898460.1| ribokinase [Ralstonia pickettii 12J]
gi|187724863|gb|ACD26028.1| ribokinase [Ralstonia pickettii 12J]
Length = 321
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 154/302 (50%), Gaps = 7/302 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+++VGS N D+ + RLP+ +TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 17 VLIVGSLNMDLVIRTPRLPRPRQTVAAPALETIPGGKGANQAVAAARLGARVAMLGCVGD 76
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + D L GV D V + GV TG A V + + GQN+I+IV G N P
Sbjct: 77 DAYGTALRDGLRREGV--DTSMVSEHAGVATGIACVTVANSGQNTIVIVAGANELLTPTM 134
Query: 190 FGDEDLEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ ++A +++ Q E PD+V + K + G VI + P+P +
Sbjct: 135 I-EAQRAAFERARVIVCQLESPPDAVECAL-KLGQRLGKTVILNPAPAIGPLPTPWIAAC 192
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE+E LT P DS E +A H G + V+V LGA G A +V+ +
Sbjct: 193 DYLIPNETEAALLTARPVDSPEAALDAAADLHAQGARHVIVTLGAHGVA-YVDAHSRLLM 251
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P A IDTT AGDTF + A E + + + F AAA++ V GA PS+P R
Sbjct: 252 P-APTAHAIDTTAAGDTFVGALAAALAEDAAADAAIEFGQAAAAVSVTRLGAQPSIPFRS 310
Query: 369 SV 370
+
Sbjct: 311 EL 312
>gi|392966087|ref|ZP_10331506.1| ribokinase [Fibrisoma limi BUZ 3]
gi|387845151|emb|CCH53552.1| ribokinase [Fibrisoma limi BUZ 3]
Length = 313
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 149/313 (47%), Gaps = 12/313 (3%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKL--SHP---- 120
P + V+GS+N D+ ++ D+LP GET+ T AGGKGANQA +L S P
Sbjct: 2 PASVCVIGSSNTDMVIKADKLPAPGETIIGGTFLMNAGGKGANQAVAAVRLAASEPDLAS 61
Query: 121 TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGG 180
FV VG D G+ G+R D+ V D P+G A++ + S G+NSI++ G
Sbjct: 62 VTFVANVGNDVFGQQARQQFDQEGLRTDF--VTTDNQEPSGVALIGVDSRGENSIMVASG 119
Query: 181 TNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI 240
N + L + +VLLQ E P + A G+ VI + P+
Sbjct: 120 ANARLSQTQVATA-LATQPDSTVVLLQLETPLPTVDYAIRQAHVRGMRVILNPAPAQ-PL 177
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
LL + +++PNESE LTG+ +A H+ GV V++ LG+KG+ L
Sbjct: 178 NPSLLTCLHVITPNESEAELLTGIRVTDETTAWQAAQHLHEAGVPNVVITLGSKGAYLST 237
Query: 301 EGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
EGE + P +DTT AGD F + AV E E + FA AAS+ V GA
Sbjct: 238 EGESTFVSA--PPVTAVDTTAAGDCFNGALAVALAESLPLLEAVTFACKAASISVTRMGA 295
Query: 361 IPSMPDRKSVLNL 373
SMP R V L
Sbjct: 296 QASMPRRYEVDTL 308
>gi|186475992|ref|YP_001857462.1| ribokinase [Burkholderia phymatum STM815]
gi|184192451|gb|ACC70416.1| ribokinase [Burkholderia phymatum STM815]
Length = 309
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 146/302 (48%), Gaps = 4/302 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ RLP+ GET+A +AGGKG NQA A+L +G VG
Sbjct: 10 VTVIGSLNMDLVARAPRLPQPGETLAGHAFAQVAGGKGGNQAVAAARLGAQVAMLGCVGA 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG + L G+ D + PTG A++++ QN+I+IV G+N P+
Sbjct: 70 DANGAQLRAGLEAEGI--DCAALETSAAAPTGVALIIVDDGSQNAIVIVAGSNGEVAPDT 127
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +V+ Q E P + AR G VI + P+P + L ID
Sbjct: 128 ISRHE-AALAAANVVICQLETPPAAVRAALAVARRLGKTVILNPAPAAGPLPADWLPLID 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P S ++ A G + V+V +GA+G + +P +
Sbjct: 187 YLIPNELEAAALTGLPVTSPQEAQAAARALRHAGARNVIVTIGAQGVVAALGDAEP-QHF 245
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF A G + +RFA AA++ V GA PS+P R
Sbjct: 246 EAPRVKAVDTTAAGDTFIGGLAAQLACGVDVADAIRFAQRAAAISVTRAGAQPSIPARAE 305
Query: 370 VL 371
V+
Sbjct: 306 VV 307
>gi|399518019|ref|ZP_10759551.1| Ribokinase [Leuconostoc pseudomesenteroides 4882]
gi|398647060|emb|CCJ67578.1| Ribokinase [Leuconostoc pseudomesenteroides 4882]
Length = 307
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 159/305 (52%), Gaps = 23/305 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA A+ F+G +G
Sbjct: 8 IVVLGSLNVDSIMKMPRMPLVGETMALTNVTTAPGGKGANQAVAAARQGANVSFIGAIGN 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D + +G VPTG A +MLQ DG N+I+I GG N +
Sbjct: 68 DANGQFMRATLVNNGVNVDQLK--TNGDVPTGSAFIMLQDDGANTILIHGGANQAL---T 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D +++ A +++ Q E+P +V + + A + V + + + EL+ D
Sbjct: 123 TADLDRDLIIDADLIIAQFEVPYAVILAAFELAHNHQVQTVLNPAPAVYELTPELMAVTD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKC-HKMGVQQVLVKLGAKGSAL-------FVE 301
I+ PNE+E LTG+ + E + V G ++ ++ LGA GS + + +
Sbjct: 183 IILPNETEAQLLTGIEVVNDEGVLNRVTDALQAKGAKRSIITLGAAGSFVADGQRRWWAQ 242
Query: 302 GEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGA 360
EK + Q DTT AGDTF + A + + ++ ++ A+ A+++ V GA
Sbjct: 243 PEKVVAQ---------DTTAAGDTFIGTLASVIAPDFNNLDDAVKRASIASAIAVTRPGA 293
Query: 361 IPSMP 365
IPS+P
Sbjct: 294 IPSIP 298
>gi|188532182|ref|YP_001905979.1| ribokinase [Erwinia tasmaniensis Et1/99]
gi|188027224|emb|CAO95063.1| Ribokinase [Erwinia tasmaniensis Et1/99]
Length = 309
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 154/306 (50%), Gaps = 6/306 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + P+ GETV K Q GGKGANQA + F+ +GE
Sbjct: 7 MAVLGSINADHILNLAHFPRPGETVIGKQYQVAFGGKGANQAVAAGRSGADIAFIACLGE 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I L+ R+D +V G TG A++ + DG+N I I G N + PE+
Sbjct: 67 DDIGKRIRQQLAND--RIDVASVATITGGSTGVALIFVNGDGENIIGIDAGANAALTPER 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ A ++L+Q E P + A A V+ + P+ ELL+ +D
Sbjct: 125 V-VEHQHIIADAQVLLMQLESPLDSVLAAAHIAHQHQTRVVLNPAPA-TPLSDELLSLVD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ +S E A K H+ G+ VL+ LG +G L +G
Sbjct: 183 IITPNETEAQILTGVTVNSDEDADLAARKLHEKGIATVLITLGNRGVWLSEQGNGQRIAG 242
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
AA +DT AGDTF + +E + E +RFA AAA++ V +GA PS+P R
Sbjct: 243 FRVAA--VDTIAAGDTFNGALMTALLEQRPMAEAVRFAHAAAAIAVTRRGAQPSVPWRDE 300
Query: 370 VLNLLQ 375
+ + LQ
Sbjct: 301 IDSFLQ 306
>gi|313680831|ref|YP_004058570.1| ribokinase [Oceanithermus profundus DSM 14977]
gi|313153546|gb|ADR37397.1| ribokinase [Oceanithermus profundus DSM 14977]
Length = 302
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 156/310 (50%), Gaps = 17/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V + R PK GETV + GGKGANQA A+L +G+VG
Sbjct: 6 VLVVGSLNMDLVVPVPRHPKPGETVVGGDLRRFPGGKGANQAVAAARLGARVRMIGRVGA 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + L G+ + V + VPTG A++ + DGQN+I++ G N WP+
Sbjct: 66 DAYGAELKRGLEAEGIATED---VAELDVPTGVALISVGEDGQNAIVVSPGANARLWPDD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E AG+V+LQ E P + A+ R+AG V+ +A P+P+ LL +
Sbjct: 123 LSPERF---AAAGVVVLQLETPLETVQRAAELGRAAGARVLLNAAPAQ-PLPEGLLGALG 178
Query: 250 ILSPNESELGRLTGM--PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+L NE E R+ G P E ++ A V ++ V +V LGA+G L G +
Sbjct: 179 VLVVNEFEAARVAGAREPAGPEEALALARVLARRVPV--AVVTLGARG--LVWAGAE--G 232
Query: 308 QSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+PA R +DTT AGD F A G+ LRF +AA +L GA PS+P
Sbjct: 233 AGTLPAFEVRAVDTTAAGDAFVGGLAAALAAGEPLVRALRFGSAAGALAATRPGAQPSLP 292
Query: 366 DRKSVLNLLQ 375
++V +LL
Sbjct: 293 TAEAVRSLLS 302
>gi|339999496|ref|YP_004730379.1| sugar Kinase [Salmonella bongori NCTC 12419]
gi|339512857|emb|CCC30600.1| sugar Kinase [Salmonella bongori NCTC 12419]
Length = 412
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 163/312 (52%), Gaps = 19/312 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
++GS N DI +DR P+ GE++ ++ + GGKGANQA +K T+FVG+VG D
Sbjct: 103 ILGSFNVDIIANVDRFPQSGESIFSENTVIGPGGKGANQALAVSKCHVKTHFVGKVGNDQ 162
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPEKF 190
+L + LS + D + +D TG A++ + QSDG+N I I G N S ++
Sbjct: 163 FSQLAYEHLSSSDI--DSFMLYQDKKAKTGTALIYVCQSDGENMIAISPGANQSITADEV 220
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF--- 247
E VK + + L Q E + + AR G V+ D AP E++N
Sbjct: 221 EAITAE-VKNSDVFLTQLENNLPATFRAIEIARRCGTKVVLDP----APYSPEVVNCLQN 275
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+D L+PNE+E L+G+ A GV QV++ +GAKG AL +G + I
Sbjct: 276 VDFLTPNETEASLLSGIHVTDLASAKTAAKAIKAKGVGQVIITMGAKG-ALIYDGLEFIH 334
Query: 308 QSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+PA A +DTTGAGD F ++ +G+S + ++FA A ASL V+ +GA +MP
Sbjct: 335 ---VPALKALCVDTTGAGDAFNGAYTAAMAKGQSILQAVKFACAFASLAVEKEGA-SNMP 390
Query: 366 DRKSVLN-LLQY 376
+ K VL L QY
Sbjct: 391 EYKDVLTRLAQY 402
>gi|320529581|ref|ZP_08030665.1| ribokinase [Selenomonas artemidis F0399]
gi|320138202|gb|EFW30100.1| ribokinase [Selenomonas artemidis F0399]
Length = 313
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 145/305 (47%), Gaps = 6/305 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+P GET+ A GGKGANQA AK + V +VG
Sbjct: 3 IAVIGSNMVDLTAYIDRMPAPGETLEAPDFALGCGGKGANQAVAAAKYDADVWMVTKVGS 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + CGV Y V+ +G A + + GQNSI+I+ G N P
Sbjct: 63 DIFADNTIANFNACGVNTTY---VRKTEGSSGVAPIFVDRSGQNSILIIKGANNRLLPRD 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE +KK G++LLQ E+P + G+PV+ + + E + D
Sbjct: 120 I-DEAEADLKKCGMILLQLEVPLETVYYAIDFGQKHGIPVLLNPAPATKDLSIEKVCACD 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
PNE+EL LTGMP ++ E+I A G++ V+V +G +GS GE ++
Sbjct: 179 FFVPNETELAILTGMPAETVEEIERAAETLLARGLKNVIVTMGGRGSLWMTGGETYRLEA 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
AA +DT+GAGD F FA +V ++ A+A A+L V KG S P + +
Sbjct: 239 YKVAA--VDTSGAGDAFIGCFAGCYVRHGDVRAAMQTASAFAALSVTAKGTQMSYPAKDA 296
Query: 370 VLNLL 374
V +
Sbjct: 297 VETFI 301
>gi|384048492|ref|YP_005496509.1| Ribokinase [Bacillus megaterium WSH-002]
gi|345446183|gb|AEN91200.1| Ribokinase [Bacillus megaterium WSH-002]
Length = 292
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 22/304 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + P GETV ++ +T+ GGKGANQA A+L +G VGE
Sbjct: 4 VTVIGSSSMDLVVTSNIRPGAGETVLGESFKTVPGGKGANQAVAAARLGADVSMIGCVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I + GV ++ + V D T H ++ ++G NSI++V G N P+
Sbjct: 64 DHYGKAILENFKSNGVSVENVKPVTDSDSGTAHIIL---AEGDNSIVVVKGANDHITPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ E +K+A IVL+Q+EIP+ VA+ + VP++ + P+ E++ +
Sbjct: 120 YVEKAKEKIKEADIVLIQQEIPEETVEYVAQLCQELKVPLLLNPAPAR-PLKAEVIEQVS 178
Query: 250 ILSPNESELGRLTGMPTDSYE-QISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE E L +E + E V+K + ++ + G +G F GEK +
Sbjct: 179 YITPNEHEAELL-------FEGKEKEEVLKQYP---NKLFITEGKQGVRYF-NGEKEV-- 225
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++P+ +V IDTTGAGDTF A+ AV EG E+ ++FA AASL V GA MP
Sbjct: 226 -LVPSYQVETIDTTGAGDTFNAALAVALAEGMGFEKGIQFANRAASLSVTKFGAQGGMPT 284
Query: 367 RKSV 370
RK V
Sbjct: 285 RKEV 288
>gi|416999699|ref|ZP_11940119.1| ribokinase [Veillonella parvula ACS-068-V-Sch12]
gi|333976505|gb|EGL77372.1| ribokinase [Veillonella parvula ACS-068-V-Sch12]
Length = 296
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 150/308 (48%), Gaps = 22/308 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +GE
Sbjct: 4 IVVIGSCNMDIVVLADKRPTAGETIMGNELHIAHGGKGANQAVAAARLGAEVTMVGCIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G++I D L + DY+ V + T H + ++G NSII++ G N +
Sbjct: 64 DTYGQMILDNLKENFINTDYIVTVPNTTTGTAHITL---AEGDNSIIVIAGANAKI-DQS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
D +++A +V++Q EIP + + A V V+ + A D + E L
Sbjct: 120 VVDNAWSAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPATD--LDSEWLKLA 177
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE EL L P S E+ A +++V LG+KG +GE
Sbjct: 178 TYITPNEHELSAL--YPNQSTEETLLA-------NENKIIVTLGSKGVGYADDGEI---- 224
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+P +V +DTTGAGDTF +FA V G+S + L + AAA+L +Q GA MP
Sbjct: 225 RIVPGFKVEPVDTTGAGDTFNGAFATAIVNGESLADALHYGNAAAALSIQRLGAQGGMPT 284
Query: 367 RKSVLNLL 374
+ V L
Sbjct: 285 KDEVAAFL 292
>gi|404416484|ref|ZP_10998304.1| putative ribokinase [Staphylococcus arlettae CVD059]
gi|403491141|gb|EJY96666.1| putative ribokinase [Staphylococcus arlettae CVD059]
Length = 304
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 160/310 (51%), Gaps = 20/310 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTL-AGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D + + R K GET+ +Q + GGKGANQA A+ + T F+ ++G
Sbjct: 5 VVIIGSTNVDKIINVARFAKPGETLHVDNAQKIYGGGKGANQALATARSNAQTTFISKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D + + + + DY ++ TG A + + GQN+I++ GG NM+
Sbjct: 65 SDGDANFMLEDFQAAQMNTDY--IITTDEAETGQAFITIDESGQNTILVYGGANMT---- 118
Query: 189 KFGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
++D+E + A ++ Q E+P I+ AR V I + + + + L
Sbjct: 119 -LNEQDVEQAEAAIANADYIIAQLEVPVPAIIKAFTIARQHDVTTILNPAPA-SELSKAL 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L DI+ PNESE L+G+P + + + +G+Q VL+ LG +G+ + +
Sbjct: 177 LQLTDIIIPNESEAELLSGIPVTDRDSMHKNADYFLSLGMQVVLITLGEQGTYYATKEDA 236
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAI 361
++IPA +V +DTT AGDTF +FA +E + EE + +A AAS+ VQ +GA
Sbjct: 237 ----NLIPAVKVHAVDTTAAGDTFIGAFASRLNMEHFNIEEAITYANKAASITVQSEGAQ 292
Query: 362 PSMPDRKSVL 371
S+P+ +VL
Sbjct: 293 KSIPEEVTVL 302
>gi|262273952|ref|ZP_06051764.1| ribokinase [Grimontia hollisae CIP 101886]
gi|262221762|gb|EEY73075.1| ribokinase [Grimontia hollisae CIP 101886]
Length = 306
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 164/312 (52%), Gaps = 18/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRHYQVIPGGKGANQAVAAARLNADIAFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I ++ G+ + + + D PTG A++ + G+NSI I N E
Sbjct: 64 DPFGVNIRESFKCDGINIGGVKMQPD--CPTGIAMIQVADSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
+ +LE +++A +L+Q E P D + + A+ A+ G VI + AP +P+ LL
Sbjct: 122 V-EPELERIRQADYLLMQLETPLDGIEL-AAQTAKRHGTRVILNP----APARELPESLL 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE+E LTG+ D A H G+ V++ LGAKG + GE
Sbjct: 176 ACIDIITPNETEAEVLTGVKVDDDASARAAADVLHGKGIDTVMITLGAKGVYVSQNGEG- 234
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
I+P RV DTT AGDTF +F G +E E ++FA AAA++ V GA S
Sbjct: 235 ---HIVPGFRVEATDTTAAGDTFNGAFVTGLMESMPLESAIKFAHAAAAISVTRFGAQTS 291
Query: 364 MPDRKSVLNLLQ 375
+P R+ V L+
Sbjct: 292 IPTREEVDAFLK 303
>gi|312134377|ref|YP_004001715.1| ribokinase [Caldicellulosiruptor owensensis OL]
gi|311774428|gb|ADQ03915.1| ribokinase [Caldicellulosiruptor owensensis OL]
Length = 312
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 166/313 (53%), Gaps = 19/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ +++D +P VGET+ AK + + GGKGANQA A+L F+G +G+
Sbjct: 4 ICVLGSVNMDVVIKVDDMPAVGETIKAKEIKKICGGKGANQAVAVARLGGNVSFIGCIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+++ + L ++D + D +PTG A +++ G+N I++ G N S E
Sbjct: 64 DENGEILLETLK--REKIDTKTIRLDDNLPTGVAYIIVDKKGKNLILVYSGMN-SDLNEN 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ EV+ + I++ Q EIP + I+ K A+ V I + + + IP EL D
Sbjct: 121 DVYNNKEVIANSKILISQLEIPINTVIKAFKIAKENKVITILNPSPV-SDIPDELYRLCD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE E RLTG+ + I + + ++ ++ LG +GSA++ G K +
Sbjct: 180 IIIPNEMEAERLTGIYPATLSDIEKIGEFFYHKSIKISIITLGERGSAVYYNG----KIN 235
Query: 310 IIPAAR--VIDTTGAGDTFTASFAVGFVEGKSRE-------ECLRFAAAAASLCVQVKGA 360
I+P+ + VIDTT AGDTF +FA K+ E + + A A++ V +GA
Sbjct: 236 IVPSIQVNVIDTTAAGDTFIGAFAWQL--SKTDELTFEKLCKIVELANKVAAISVTKEGA 293
Query: 361 IPSMPDRKSVLNL 373
S+P V+ +
Sbjct: 294 QSSIPYLSEVIGM 306
>gi|412986400|emb|CCO14826.1| ribokinase [Bathycoccus prasinos]
Length = 735
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 177/370 (47%), Gaps = 64/370 (17%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTS--QTLAGGKGANQAACGAKLS--- 118
IN P + VVGS NFD+ V + LPK ET+ A S GGKGANQA GAK+S
Sbjct: 47 INNVPAIFVVGSVNFDVTVHTE-LPKSEETMRAYNSNIHRALGGKGANQA-VGAKMSLLR 104
Query: 119 ---HPTYFVGQVGEDANGKLITDALSG-CGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNS 174
YFVG+ G+D GK + + LS V L + +++ V +G V+L +G S
Sbjct: 105 PQDSVVYFVGKFGDDEEGKWLFNTLSEEYSVNLKHSESIRN--VSSGTGFVLLSKEGVAS 162
Query: 175 IIIVGGTNM-----SCWPEKFGD---------EDL------------EVVKKAGIVLLQR 208
++V G N S P F D ED + ++LLQR
Sbjct: 163 SVVVPGANAEWEAKSALPNFFADVFSSSDISTEDRTCLANDEREYGDSISSTKTVLLLQR 222
Query: 209 EIPDSVNIQVAKAARSAG----VPVIFDAGGMDAPIPQELLNFIDILSPNESELGRL--T 262
EIPD+V+ +K + G V+ D GG + + L +DI+SPN SEL L T
Sbjct: 223 EIPDAVSEAASKVFKEKGDLNPRIVLLDLGGSQSRVSDALFQSVDIISPNLSELETLVAT 282
Query: 263 GMPT-----------DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE------KP 305
+P D + ++ V+K G Q +LV LG +GS + + KP
Sbjct: 283 SIPDYGVNIYNFENDDDAIRAAKGVLKSRGNGKQALLVTLGHRGSFYVTDKDEEFVFVKP 342
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ S+ P V+D T AG +F +SFAV EG + + A+A+ +L VQ GA PS+P
Sbjct: 343 L-ASLDPEL-VVDCTAAGYSFRSSFAVAVAEGNTITRSMEIASASGALAVQKMGAAPSLP 400
Query: 366 DRKSVLNLLQ 375
+R S+ L+
Sbjct: 401 NRASIEEFLE 410
>gi|317471734|ref|ZP_07931075.1| ribokinase [Anaerostipes sp. 3_2_56FAA]
gi|316900838|gb|EFV22811.1| ribokinase [Anaerostipes sp. 3_2_56FAA]
Length = 639
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 147/304 (48%), Gaps = 12/304 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + VVGS N D Y+ + +LP G+TV++ TS GGKG NQ+ AKL H +G V
Sbjct: 327 PKITVVGSINIDTYLNVPQLPHSGKTVSSSTSFVYPGGKGINQSIGAAKLGHRVTLIGNV 386
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D + + +AL GV + V + TG A + ++S G + I I+ G N P
Sbjct: 387 GSDIDSASVYNALKEYGV--ESFGVKRCNQEKTGQAFIFVESSGHSMISILSGANNILTP 444
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E K G L+Q EIP + + A G I + IP E+L+
Sbjct: 445 EDIRKRK-RFFKNTGYCLIQSEIPLDTVAEACRIAHECGAKTILKP-SVCGFIPSEVLSG 502
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPI 306
+DIL PNE EL + P S + E + G++ ++V LG G + + EK
Sbjct: 503 VDILVPNEEELNEIC--PAQS--TLQEKTGALLEYGIETIIVTLGENGCYVRTADLEKHF 558
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
P+ +D TGA D F ++ A + G S EE +R A AA C+ +G +PS+ D
Sbjct: 559 PAVPFPS---VDNTGASDAFISALAAYLLYGYSLEEAVRIATYAAGFCISREGVVPSLID 615
Query: 367 RKSV 370
++S+
Sbjct: 616 KRSL 619
>gi|149188637|ref|ZP_01866929.1| ribokinase [Vibrio shilonii AK1]
gi|148837547|gb|EDL54492.1| ribokinase [Vibrio shilonii AK1]
Length = 336
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 158/308 (51%), Gaps = 10/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L+V+GS N D +++ P+ GET+ Q + GGKGANQA A+L T F+ VG+
Sbjct: 34 LIVLGSVNADHVLQVPSFPRPGETLHGMNYQVIPGGKGANQAVAAARLGGDTGFIACVGD 93
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G I +A G+ + V + G PTG A++ + G+NSI I N +
Sbjct: 94 DAFGINIREAFKADGINI--AGVQLEPGTPTGIAMIQVAESGENSICISAEANAKLTTAR 151
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ A +L Q E P AK A+ + V+ + A +P LL +D
Sbjct: 152 V-EPHRTMIENAKYLLTQLETPIEGIEYAAKLAKQSKTNVVLNPAPAMA-LPDSLLECVD 209
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+E LTG+ E EA + H+ G++ V++ LG+KG L G +
Sbjct: 210 VITPNETEAEVLTGITVTDDESAQEAANELHRKGIEIVMITLGSKGVWLSQNG----RGV 265
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IP +V DTT AGDTF + G +EGKS EE + FA AAA++ V GA S+P
Sbjct: 266 RIPGFKVDATDTTAAGDTFNGALVTGLIEGKSIEEAIVFAHAAAAISVTRFGAQTSIPSL 325
Query: 368 KSVLNLLQ 375
V L+
Sbjct: 326 DEVKEFLE 333
>gi|387902194|ref|YP_006332533.1| ribokinase [Burkholderia sp. KJ006]
gi|387577086|gb|AFJ85802.1| Ribokinase [Burkholderia sp. KJ006]
Length = 308
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 138/296 (46%), Gaps = 4/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A + AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGRAYAQAAGGKGGNQAVAAARLGAQVAMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D V TG A++++ QN+I+IV G N P
Sbjct: 71 DAHGAALRAGLEAEGI--DCSRVATSASASTGVALIVVDDASQNTIVIVAGGNGEVTPAT 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 VAQHE-AAIAAADVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P A G + VLV LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTGLPVRDPADAEAAARALQAAGARNVLVTLGARG-VLALSADGAARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF FAV G + +RFA AA++ V GA PS+P
Sbjct: 247 PAPVVQALDTTAAGDTFIGGFAVRLAAGDGVDASIRFAQRAAAVSVTRAGAQPSIP 302
>gi|239817601|ref|YP_002946511.1| ribokinase [Variovorax paradoxus S110]
gi|239804178|gb|ACS21245.1| ribokinase [Variovorax paradoxus S110]
Length = 305
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 15/306 (4%)
Query: 71 VVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGED 130
+V+GS N DI + + P GET+ + + GGKGANQA A+ +G VG D
Sbjct: 1 MVLGSLNMDIVLRVPHAPAAGETLLGHSIAHIPGGKGANQAVSCAREGGRVGMIGCVGND 60
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
A+G+ + DAL G+ D + PTG A+++++ GQN I+++ G N E
Sbjct: 61 AHGQALRDALGRDGI--DTTALRTSPSEPTGTALILVEDGGQNRIVMIPGANAQA--EID 116
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKA---ARSAGVPVIFDAGGMDAPIPQELLNF 247
+ ++ A ++ Q EIP QVA+A A AG V+ + + PI + L
Sbjct: 117 APALRQQLQGAAFLVTQFEIPLD---QVARAISVAHEAGCKVLLNPSPVQ-PIAEPLWPR 172
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFVEGEKPI 306
ID L NE E L G DS ++ + A G+ +V+V LGA+G+ A+ +G +
Sbjct: 173 IDTLVVNEIEAQALCGQAADSPQEAALAGQALRAKGIARVVVTLGARGAVAIDADGAR-- 230
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
P + +DTT AGDTF + AV EG+S +E +R AA+LC+Q GA PS+P
Sbjct: 231 -HHPAPQVQAVDTTAAGDTFLGALAVALGEGQSFDEAVRLGIRAAALCIQQPGAQPSIPQ 289
Query: 367 RKSVLN 372
R +VL
Sbjct: 290 RDAVLQ 295
>gi|392939200|ref|ZP_10304844.1| ribokinase [Thermoanaerobacter siderophilus SR4]
gi|392290950|gb|EIV99393.1| ribokinase [Thermoanaerobacter siderophilus SR4]
Length = 300
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 157/307 (51%), Gaps = 24/307 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V++GS N D ++ +LP+ GETV A + + GGKGANQA +L Y +G VG
Sbjct: 3 IVIIGSINRDYTAQVKKLPEKGETVIASSYKISIGGKGANQAVAAKRLGAQVYMIGAVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM---SCW 186
G+ I L G+ + + ++ TG+A++ + G N+I++ G N S W
Sbjct: 63 SDGGRDIIKKLESEGIDVSGVLFTEE---VTGNAMITIDELGFNTIVVYPGANAKLDSSW 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
E+ +++++A V+LQ EIP K ++ V VI + AP IP E
Sbjct: 120 IERHS----KIIEEADFVILQLEIPLETVETAVKLSKKYNVKVILNP----APAKEIPDE 171
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+ +IDI++PNE EL +LTG TD I + + GV +V+V LG KGS + G+
Sbjct: 172 VYKYIDIITPNEVELTQLTG-TTD----IKDGANMLIEKGVSEVIVTLGEKGS-YYTNGQ 225
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ I +P ID+T AGD+F A+ AV E + + L FA +L GA S
Sbjct: 226 EEIFSEAVP-VNTIDSTAAGDSFNAAIAVALCENMNIKSALNFANIVGALTTTKMGAQDS 284
Query: 364 MPDRKSV 370
+P R V
Sbjct: 285 LPYRDEV 291
>gi|309781138|ref|ZP_07675875.1| ribokinase [Ralstonia sp. 5_7_47FAA]
gi|404393950|ref|ZP_10985754.1| ribokinase [Ralstonia sp. 5_2_56FAA]
gi|308919959|gb|EFP65619.1| ribokinase [Ralstonia sp. 5_7_47FAA]
gi|404279053|gb|EGY65112.2| ribokinase [Ralstonia sp. 5_2_56FAA]
Length = 321
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 154/302 (50%), Gaps = 7/302 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+++VGS N D+ + RLP+ G+TVAA +T+ GGKGANQA A+L +G VG+
Sbjct: 17 VLIVGSLNMDLVIRTPRLPRPGQTVAAPALETIPGGKGANQAVAAARLGARVAMLGCVGD 76
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + L GV ++V G TG A V + GQN+I+IV G N P
Sbjct: 77 DAYGTALREGLRREGVDTSMVSV--HAGAATGIACVTVAKSGQNTIVIVAGANEMLTPTM 134
Query: 190 FGDEDLEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ ++A +++ Q E PD+V + K + G VI + P+P +
Sbjct: 135 I-EAQRAAFERARVIVCQLESPPDAVECAL-KLGQRLGKTVILNPAPAIGPLPTPWIAAC 192
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE+E LT P DS E +A H G + V+V LGA+G A +V+ +
Sbjct: 193 DYLIPNETEAALLTARPVDSPEAALDAAADLHAQGARHVIVTLGARGVA-YVDAHSRLLM 251
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
P A IDTT AGDTF + A E + + + F AAA++ V GA PS+P R
Sbjct: 252 P-APTAHAIDTTAAGDTFVGALAAALAEDAAADAAIEFGQAAAAVSVTRLGAQPSIPFRS 310
Query: 369 SV 370
+
Sbjct: 311 EL 312
>gi|381336280|ref|YP_005174055.1| ribokinase family sugar kinase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356644246|gb|AET30089.1| ribokinase family sugar kinase [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 303
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 159/306 (51%), Gaps = 11/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA ++ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLVGETMALTEVTTAPGGKGANQAVAASRQGANVSFIGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D ++ D VPTG A +MLQ G N+I+I GG N + E
Sbjct: 65 DANGQFMRATLLTNGVNVDAVSTNSD--VPTGSAYIMLQESGANTILIHGGANQALTIE- 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D ++ +A +++ Q E+P V + K A+ V I + + EL+ D
Sbjct: 122 --DIDTALIAQADVLIAQFEVPFEVILAAFKIAKKNNVQTILNPAPAVYELTPELMAVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKC-HKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE+E LTG+ + E + V GVQ+ ++ LG GS +G+K +
Sbjct: 180 IVLPNETEAQLLTGINVINDEGVLNRVSDALQAKGVQRSIITLGEAGS-FIADGQK--RW 236
Query: 309 SIIPA-ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+ P DTT AGDTF + A S ++ ++ A A+++ V GAIPS+P
Sbjct: 237 WVQPEKVDAQDTTAAGDTFIGTLASVIAPDFSNLDDAVQRANIASAIAVTRPGAIPSIPT 296
Query: 367 RKSVLN 372
K V N
Sbjct: 297 DKEVDN 302
>gi|421878155|ref|ZP_16309638.1| Sugar kinase, ribokinase family [Leuconostoc citreum LBAE C11]
gi|390448030|emb|CCF25758.1| Sugar kinase, ribokinase family [Leuconostoc citreum LBAE C11]
Length = 304
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 155/304 (50%), Gaps = 11/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P GET+A T GGKGANQA A+ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLEGETMALTDVTTAPGGKGANQAVAAARQGAEVSFIGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D V +G VPTG A +MLQ G N+I+I GG N +
Sbjct: 65 DANGQFMRATLLTNGVNVDA--VTTNGDVPTGSAYIMLQDSGANTILIHGGANQAL---T 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D D ++ A ++ Q E+P V I A++ GV I + + EL+ D
Sbjct: 120 VADLDKTMIADADTLIAQFEVPLDVIIAAFNVAKANGVQTILNPAPAVYDLTPELMAVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVV-KCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE+E L+G+ ++ E + V GV + ++ LG GS +G+K +
Sbjct: 180 IILPNETEAQLLSGLTVENDEAVLNRVSDDLLSQGVSRSVITLGDAGS-FVADGQK--RW 236
Query: 309 SIIP-AARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
P + +DTT AGDTF + A S ++ + A+ A+++ V GAIPS+P
Sbjct: 237 WAKPNKVKAVDTTAAGDTFIGTLATVIAPDFSNLDDAIHRASVASAIAVTRAGAIPSIPT 296
Query: 367 RKSV 370
V
Sbjct: 297 SDEV 300
>gi|425057569|ref|ZP_18460980.1| ribokinase [Enterococcus faecium 504]
gi|403040262|gb|EJY51352.1| ribokinase [Enterococcus faecium 504]
Length = 305
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGITEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IIPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|238765128|ref|ZP_04626062.1| Ribokinase [Yersinia kristensenii ATCC 33638]
gi|238696680|gb|EEP89463.1| Ribokinase [Yersinia kristensenii ATCC 33638]
Length = 308
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV + + GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVVGEQYKVAFGGKGANQAVAAGRSGANIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+ + D + G TG A++ + S+G+N I I G N + PE
Sbjct: 66 DDIGDRVRQQLASDNI--DTQPIEAIAGSTTGVALIFVNSEGENVIGIHAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
G +V+ A +L+Q E P I AK A+ VI + AP +P ELL
Sbjct: 124 LGRYQQQVI-GADALLMQLESPLETVIAAAKLAKQHQTQVILNP----APARELPDELLT 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + + A H G+ V++ LG++G L G+ +
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAARAAQILHDKGIATVIITLGSRGVWLSERGQGKL 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+DT AGDTF + +EG+S + +RFA AAA++ V GA PS+P
Sbjct: 239 VAGF--KVNAVDTIAAGDTFNGALLTALLEGQSMDLAVRFAHAAAAIAVTRSGAQPSIPW 296
Query: 367 RKSVLNLLQ 375
R + + LQ
Sbjct: 297 RAEIDSFLQ 305
>gi|238759536|ref|ZP_04620698.1| Ribokinase [Yersinia aldovae ATCC 35236]
gi|238702195|gb|EEP94750.1| Ribokinase [Yersinia aldovae ATCC 35236]
Length = 308
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV K GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVIGKQYNVAFGGKGANQAVAAGRSGANIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+G + D + G+ TG A++ + +G+N I I G N + P+
Sbjct: 66 DDIGDRVRRQLAGDNI--DTAPIEAVAGITTGVALIFVNGEGENVIGIHAGANSAVTPDY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
G +V+ A +L+Q E P I AK A+ VI + AP +P ELL
Sbjct: 124 LGRYQQQVI-DADALLMQLESPLETVIAAAKLAKQHQTQVILNP----APARELPDELLT 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + ++A H G+ V++ LG++G L +G +
Sbjct: 179 LVDMITPNETEAERLTGVHIEQDDDAAKAAQILHNKGIATVIITLGSRGVWLSEQGHGKL 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+DT AGDTF + +EG+S + +RFA AAA++ V GA PS+P
Sbjct: 239 VAGF--KVEAVDTIAAGDTFNGALLTALLEGQSMDLAVRFAHAAAAIAVTRPGAQPSIPW 296
Query: 367 RKSVLNLLQ 375
R + LQ
Sbjct: 297 RVEIDRFLQ 305
>gi|163749203|ref|ZP_02156453.1| ribokinase [Shewanella benthica KT99]
gi|161331273|gb|EDQ02162.1| ribokinase [Shewanella benthica KT99]
Length = 306
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 171/310 (55%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D +++ PK G+T+ AK Q +AGGKGANQA AKL + +G
Sbjct: 4 LSVLGSINVDHLMQVGAAPKGGQTIQAKQYQIVAGGKGANQAVAAAKLGADVAMIACIGI 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + L G+ D + G TG A++ ++ G+N I I G N +C E
Sbjct: 64 DAIGEQMKQGLVDVGI--DTKGITTIPGENTGVAMIYVEDSGENRIGIWPGAN-ACLTET 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E ++ + ++LLQ E P + + AK A++AG V+ + A +P+ LL +D
Sbjct: 121 VMLEHKAAIQDSDLLLLQLETPVTTLVAAAKIAKAAGTRVVLNPAPAKA-LPESLLRHVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKM----GVQQVLVKLGAKGSALFVEGE-K 304
I++PNE+E +LTG+ + ++S+A + K+ G++ VL+ LG +G L +GE K
Sbjct: 180 IITPNETEAEQLTGV---AIRELSDADIAARKLYSQFGIETVLITLGKRGVWLSHKGEGK 236
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I ++ A IDTT AGDTF F G +EG+S + +RF AAA+L V GA S+
Sbjct: 237 HIAGFVMQA---IDTTAAGDTFNGGFVCGLLEGQSMLDAVRFGQAAAALSVTRMGAQSSI 293
Query: 365 PDRKSVLNLL 374
P R++ L L
Sbjct: 294 PTREATLERL 303
>gi|336310121|ref|ZP_08565093.1| ribokinase in cluster with nucleoside hydrolase [Shewanella sp.
HN-41]
gi|335865851|gb|EGM70842.1| ribokinase in cluster with nucleoside hydrolase [Shewanella sp.
HN-41]
Length = 332
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 166/312 (53%), Gaps = 19/312 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
++V+GSAN D ++ + LP G+T+ ++ + GGKGANQA A+LSHP F+
Sbjct: 22 ILVIGSANADHVMKFEYLPAPGQTLMSREYRLEHGGKGANQAVACARLSHPHSQIDFICH 81
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G+D+ G + + G+R+D ++ + + + TG A++ + +G+NSI I G N +
Sbjct: 82 LGQDSVGNEMCASWLKDGIRIDGISQIAN--MNTGTAMIFVADNGENSIGIAAGANANLT 139
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---E 243
P + D+ + A +L+Q E P + A+ G+ + + AP+ +
Sbjct: 140 PIEL-DKHYALFANAQFMLIQLETPMETVSHALQTAKRLGITTVLNP----APVVSSELD 194
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
L ++DI++PNE+E LTG+ ++ E A H+ GV V++ LG+KG+ + G
Sbjct: 195 YLKWVDIITPNETEAEALTGIEVNNEEDAKLAAQLLHQQGVTTVVITLGSKGAFISSAG- 253
Query: 304 KPIKQSIIP--AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+IP A R IDT AGDTF + VG EG S + FA A+++ V +GA
Sbjct: 254 ---FTGLIPALAVRAIDTVAAGDTFNGALVVGLSEGMSIAAAVGFANTASAITVTREGAQ 310
Query: 362 PSMPDRKSVLNL 373
++P R+ + L
Sbjct: 311 RAIPYRQELSTL 322
>gi|261405850|ref|YP_003242091.1| ribokinase [Paenibacillus sp. Y412MC10]
gi|261282313|gb|ACX64284.1| ribokinase [Paenibacillus sp. Y412MC10]
Length = 292
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 158/303 (52%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GSA+ D+ V + P GETV + +T+ GGKGANQA A+L VG VG+
Sbjct: 4 IVVIGSASMDLVVTSAKRPGAGETVLGDSFKTVPGGKGANQAVAAARLGAEVTMVGCVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ I L GV DY+ V G+ +G A ++L ++G NSI++V N PE
Sbjct: 64 DSFGETILSNLQSNGVITDYVEPVT--GMESGTAHIIL-AEGDNSIVVVKAANDRITPE- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D+ +V++ A IVL+Q+EIP+ + V+ VP++ + P+P ++
Sbjct: 120 YVDQAEKVIQAADIVLIQQEIPEETVVHVSAICAKYQVPLMLNPAPAR-PVPSVVIERAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE E L E + + +++V G KG F +++
Sbjct: 179 YITPNEHEAAILFN---------DEPLGDVLRRYPNKLIVTEGKKGVRYF----DGMQEI 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++P +V +DTTGAGDTF +FAV EG S LRFA AASL V GA MP R
Sbjct: 226 VVPGYKVEAVDTTGAGDTFNGAFAVALAEGMSLTASLRFANRAASLSVMKFGAQGGMPSR 285
Query: 368 KSV 370
V
Sbjct: 286 LEV 288
>gi|157694015|ref|YP_001488477.1| ribokinase [Bacillus pumilus SAFR-032]
gi|157682773|gb|ABV63917.1| ribokinase [Bacillus pumilus SAFR-032]
Length = 292
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 154/306 (50%), Gaps = 26/306 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS + D+ V ++ P GETV ++ +T+ GGKGANQA A+L Y +G+VG+
Sbjct: 4 IVVVGSCSMDLVVTSNKRPNAGETVLGESFKTVPGGKGANQAVASARLGADVYMIGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I L GVR YM V + T H ++ ++G NSI++V G N P+
Sbjct: 64 DTYGQDILSNLQDQGVRTSYMKPVTEMESGTAHIIL---AEGDNSIVVVKGANNEVTPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ E L + G+VL+Q+EIP+ V +PVI + AP + Q++L+
Sbjct: 120 YVREALSTIDDIGMVLIQQEIPEETVEAVCAICSKKEIPVILNP----APARKVSQQVLD 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
++PNE E + ++ + ++L+ G G F +
Sbjct: 176 QATYITPNEHEAVLMFN---------GRSIEDALRQYPNKLLITEGKNGVRYF----DGL 222
Query: 307 KQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K+ ++P +DTTGAGDTF + AV EGKS + L FA AAS+ V GA M
Sbjct: 223 KEVLVPGFPVEAVDTTGAGDTFNGALAVALTEGKSLYDALAFANLAASMSVTKFGAQGGM 282
Query: 365 PDRKSV 370
P R+ +
Sbjct: 283 PTREEL 288
>gi|295681142|ref|YP_003609716.1| ribokinase [Burkholderia sp. CCGE1002]
gi|295441037|gb|ADG20205.1| ribokinase [Burkholderia sp. CCGE1002]
Length = 304
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 150/300 (50%), Gaps = 8/300 (2%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
+VGSAN D+ V +RLP GET+ T AGGKGANQA A+L +G VG D
Sbjct: 1 MVGSANMDLVVHAERLPARGETLLGGAFATFAGGKGANQAVAAARLGASVAMLGCVGRDE 60
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
+G + D L + +++ V D +G AV+ + +DG N+I++ G N + P+
Sbjct: 61 SGAQLRDGLKHEHIDTAHLHTVDD--RLSGIAVITVAADGANTIVVSPGANAALMPDHI- 117
Query: 192 DEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
D + AG+++ Q E+P D+V ++ AAR G P + + A +P L
Sbjct: 118 DAAAAGIAAAGMLICQLEVPLDAVAHAISLAARF-GTPALLNPAPAQA-LPDALYEQTSF 175
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
L NESE LT + DS EA + GV+ V+V LGA+G GE+
Sbjct: 176 LILNESEAALLTDVAVDSPASAREAATRLRAKGVETVIVTLGAEGVWYATPGEE--GHLP 233
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
P IDTT AGDTF FA V G S + + FA AA+L V +GA S+P V
Sbjct: 234 APCVDAIDTTAAGDTFVGGFAAERVRGASIRDAIDFAQRAAALSVTREGAQASIPTESEV 293
>gi|428772032|ref|YP_007163820.1| ribokinase [Cyanobacterium stanieri PCC 7202]
gi|428686311|gb|AFZ46171.1| ribokinase [Cyanobacterium stanieri PCC 7202]
Length = 309
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 149/303 (49%), Gaps = 7/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ V + LP+ GET+ GGKGANQA ++L PT F+G+VG+
Sbjct: 6 IVVFGSVNIDLTVTVSHLPQSGETLKGNNFTISVGGKGANQAIALSRLGTPTAFIGRVGK 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSD-GQNSIIIVGGTNMSCWPE 188
D G I + L GV +D + +D PTG A++ ++ + G+N III+ G N +
Sbjct: 66 DNWGDRILEELHQQGVNIDKFS--QDVQHPTGTAMITVEEETGENQIIIISGANGVVGTK 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D ++ +LLQ EIP V ++ A+ VPVI D +P ++ I
Sbjct: 124 ELLDLT-NLLPHCRYLLLQLEIPLPVVLEAITLAKKHHVPVILDPAPAHT-LPHDIYQDI 181
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I++PN E +L G + Q+ +A GVQ V++ +GA G E+
Sbjct: 182 SIITPNAIEASQLVGFEVQTQAQVEKAGQWFLDKGVQTVIITMGADGVYCASHHEQFWLS 241
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+ P V+DT GAGD F A V S EE + + SL V KG P++ + +
Sbjct: 242 T--PPVTVVDTVGAGDAFNGGLATALVNNYSLEEAVTWGLINGSLSVTRKGEFPTLSEFQ 299
Query: 369 SVL 371
L
Sbjct: 300 QWL 302
>gi|431443488|ref|ZP_19513556.1| ribokinase [Enterococcus faecium E1630]
gi|431760429|ref|ZP_19549029.1| ribokinase [Enterococcus faecium E3346]
gi|430586129|gb|ELB24392.1| ribokinase [Enterococcus faecium E1630]
gi|430623935|gb|ELB60599.1| ribokinase [Enterococcus faecium E3346]
Length = 305
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IIPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|340502714|gb|EGR29373.1| ribokinase, putative [Ichthyophthirius multifiliis]
Length = 278
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 14/271 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+ S +FD+++ + R P GET+ AK S GGKGANQA +KL T F GQ G+
Sbjct: 8 ICVICSGSFDLFLIVPRFPVEGETMPAKKSYIKNGGKGANQAVAASKLGSSTIFAGQFGK 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE- 188
D G+ + + G V + +++ GV TG A++ L G+NSIIIVGG N E
Sbjct: 68 DVYGQNLVHEMQGNMVETGNIRLLE--GVQTGQAIITLTEKGENSIIIVGGANTFYESED 125
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
E + + ++ +LLQ+EIP ++ A+ A+ V+ D GG D IP+ L+ +
Sbjct: 126 SLPLEYQKAILQSRFLLLQKEIPLKISTLAAQFAKKYQKIVMLDCGGTDEKIPENLMKNL 185
Query: 249 DILSPNESELGRLTGMPTD--SYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG---E 303
D +SPN +EL + G S ++I E +++ +K V V++K G+ GS + E E
Sbjct: 186 DFISPNSTELQSILGWEKKEISTQEIREQIIRKYKDLV--VVLKKGSDGSEVISENIQIE 243
Query: 304 KP----IKQSIIPAARVIDTTGAGDTFTASF 330
P + + I+ + DT GAGD FTA F
Sbjct: 244 VPSITQLDKKILDKYTIKDTVGAGDCFTAVF 274
>gi|208780113|ref|ZP_03247456.1| ribokinase [Francisella novicida FTG]
gi|208744117|gb|EDZ90418.1| ribokinase [Francisella novicida FTG]
Length = 306
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 153/297 (51%), Gaps = 5/297 (1%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GSAN D+ V++D+L + G+T+ ++ + GGKGANQA +L F+ +G
Sbjct: 2 SVVVIGSANRDLVVKVDQLAQKGQTIISQNYEEFCGGKGANQAVAARRLGENVTFITNLG 61
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D+ G + + G LD + +D G TG A + + + GQN I +V G N +
Sbjct: 62 KDSFGDRLLEFYKKEG--LDSSTINQDSGSNTGLAFICVDNQGQNIINVVMGANAK-LDQ 118
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D+ + +++A I+L Q E P +A ++ A + +PQELL +
Sbjct: 119 QILDKHNQKIQQAKIILTQLETPLETIEYLADKISDKQTFILNPAPARE--LPQELLKKV 176
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DIL+PNE+E L+G+ E +A + H GV V++ LG +G+ L + K
Sbjct: 177 DILTPNETEASILSGIEVKDIETAKQAAKELHNKGVATVIITLGEQGALLSKNNGQEQKL 236
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
V+DTT AGDTF A +G S E+ + A AA+L V ++GA S P
Sbjct: 237 FATKKVDVVDTTAAGDTFNGVLAFCLDKGLSIEQSIEIANTAAALAVTIEGAEDSAP 293
>gi|150018888|ref|YP_001311142.1| ribokinase [Clostridium beijerinckii NCIMB 8052]
gi|149905353|gb|ABR36186.1| ribokinase [Clostridium beijerinckii NCIMB 8052]
Length = 299
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 18/304 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D+ ++ P G+TV K T GGKG NQA +L VG++GE
Sbjct: 4 LCVIGSLNMDLVTTVENFPAAGQTVMGKEFNTFPGGKGGNQAIALGRLGSDVLMVGKIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + L V+ +++ K G+ +G AV+ + + G+N+II+V G N
Sbjct: 64 DIYGKRYLEVLRSNNVKSHGVSIEK--GISSGVAVIQVSNKGENNIIVVPGANAEV-DIN 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQELLNFI 248
+ + ++++A I L Q EIP I K + G VI D A +D +P E+ ++
Sbjct: 121 YIESKWSLIERADIFLFQLEIPLETAIATMKKLKKQGKTVILDPAPALD--LPDEIFKYV 178
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L+PNE+EL L G +S E + EA GV+ ++ KLG+ G+A+ ++ +K I+
Sbjct: 179 DYLTPNETELETLIGRNINSEENLVEAAKTLFDKGVKVIVAKLGSDGAAI-IKKDKCIR- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+P + IDTT AGD+F + K +EC+ F A ++ GA +MP
Sbjct: 237 --VPGFIIDPIDTTAAGDSF------ALAKEKELKECVIFGNAVGAISTTALGAQEAMPT 288
Query: 367 RKSV 370
+ V
Sbjct: 289 FERV 292
>gi|293553045|ref|ZP_06673688.1| ribokinase [Enterococcus faecium E1039]
gi|291602794|gb|EFF33003.1| ribokinase [Enterococcus faecium E1039]
Length = 305
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
IIPA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IIPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|326692540|ref|ZP_08229545.1| ribokinase [Leuconostoc argentinum KCTC 3773]
Length = 314
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 167/332 (50%), Gaps = 31/332 (9%)
Query: 49 CQCQRRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGA 108
Q R DQN N +VV+GS N D +++ R+P VGET+A T GGKGA
Sbjct: 1 MQHAREDQNE------NMTKKIVVLGSLNVDSIMKMPRMPLVGETMALTDVTTAPGGKGA 54
Query: 109 NQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQ 168
NQA ++ F+G VG+D+NG + L+ V D + + VPTG A +MLQ
Sbjct: 55 NQAVAASRQGAQVAFIGAVGQDSNGHFMRQTLADQAV--DVAAIQTNATVPTGSAYIMLQ 112
Query: 169 SDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVP 228
+G N+I+I GG N + + DEDL + +A ++ Q E+P +V K A++ V
Sbjct: 113 DNGANTILIHGGANQALTVDDL-DEDL--IAQADTLIAQFEVPLAVITAAFKMAKAHNVQ 169
Query: 229 VIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDS----YEQISEAVVKCHKMGV 284
+ + + L + DI+ PNE+E LTG+ ++ Q+S+A++ GV
Sbjct: 170 TVLNPAPAVYEVTPTLASLTDIILPNETEAQLLTGITVENDRAVLNQVSDALLAT---GV 226
Query: 285 QQVLVKLGAKGSALFVEG-----EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKS 339
+ ++ LG GS +G KP K + +DTT AGDTF + A S
Sbjct: 227 ARSIITLGEAGS-FIADGANRWWAKPKKVA------AVDTTAAGDTFIGTLASELAADFS 279
Query: 340 R-EECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+ + A+ A+++ V GAIPS+P R+ V
Sbjct: 280 NLVDAVDRASTASAIAVTRPGAIPSIPTREEV 311
>gi|358064684|ref|ZP_09151246.1| hypothetical protein HMPREF9473_03309 [Clostridium hathewayi
WAL-18680]
gi|356697019|gb|EHI58616.1| hypothetical protein HMPREF9473_03309 [Clostridium hathewayi
WAL-18680]
Length = 438
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 154/304 (50%), Gaps = 16/304 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ + ++ LP+ G+T++ + GGKGANQA AKL + +G+VG
Sbjct: 121 IVVVGSVNIDVTLNVNELPQPGKTISTSKHSVIPGGKGANQAVGVAKLENEVSLIGRVGN 180
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + L+ + V D + +D TG A + +Q+DG++ I ++ G N + P
Sbjct: 181 DYDSSLVYSYMEEYHV--DIQGIKRDSLAETGKAYIHVQNDGESMITLLAGANQNLTPAD 238
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + LLQ E+P++ ++ A+ A + GV I ++ I + L+ +ID
Sbjct: 239 ISCYD-DLFEHCEYCLLQTEVPEAAILEAARLAHAHGVKNILKPAAINR-IDRSLMQYID 296
Query: 250 ILSPNESELGRLT-GMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I PN E L GMP E ++A + MG + V++ LG G + +
Sbjct: 297 IFVPNRKEAEMLCPGMP--DVESKADAFL---AMGAKTVIITLGHHGCYI----KDTSFC 347
Query: 309 SIIPAARVI--DTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PAA I DTTGA D F ++ AV G S + A AA CV +G IP+M D
Sbjct: 348 GYLPAADFIPVDTTGAADAFISTLAVYLQNGYSLVNAAKIATYAAGFCVSRQGVIPAMID 407
Query: 367 RKSV 370
R S+
Sbjct: 408 RNSL 411
>gi|452973585|gb|EME73407.1| ribokinase RbsK [Bacillus sonorensis L12]
Length = 293
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 157/314 (50%), Gaps = 34/314 (10%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + PK GETV + +T+ GGKGANQA A+L + +G VG+
Sbjct: 4 ICVIGSSSMDLVVTSQKRPKAGETVLGDSFKTVPGGKGANQAVAAARLGAEVHMIGCVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I L V DY+ V D T H V+ +DG NSII+V G N PE
Sbjct: 64 DHYGKAILANLKANDVLTDYVEPVTDTESGTAHIVL---ADGDNSIIVVKGANDHVTPE- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + L +++A IV++Q+EIP+ V++ ++ G P++ + P+ + +
Sbjct: 120 YVERALPAIERADIVMIQQEIPEDTVDYVSRLCKTLGTPLLLNPAPA-RPLSKATIENAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPIK- 307
++PNE EA V + ++ L + K LF+ EG+ ++
Sbjct: 179 YITPNE-----------------HEASVLFQGLSREEALQRFPEK---LFITEGKNGVRF 218
Query: 308 -----QSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+ +IP+ + +DTTGAGDTF A AV EG E LRFA AASL V GA
Sbjct: 219 HNGTEERLIPSFPVKAVDTTGAGDTFNAGLAVALSEGGDIESALRFANRAASLSVLKFGA 278
Query: 361 IPSMPDRKSVLNLL 374
MP R V L
Sbjct: 279 QGGMPKRAEVERAL 292
>gi|260587499|ref|ZP_05853412.1| ribokinase [Blautia hansenii DSM 20583]
gi|260541764|gb|EEX22333.1| ribokinase [Blautia hansenii DSM 20583]
Length = 296
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 152/290 (52%), Gaps = 11/290 (3%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D + + ++P GET+ + + GGKGANQA KL +G VG+D G+++
Sbjct: 1 MDFVINVKKMPLSGETILGEDVNLVPGGKGANQAYAVGKLGGQVDMIGAVGDDLYGRMLI 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
+ L GV + + +++ G PTG+A + + G+NSII+V G N + D+ + +
Sbjct: 61 ENLQNVGVGISGIEIIQ--GTPTGNAFISVDEGGENSIIVVQGANNKLTTQMI-DKHVNL 117
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
+K+A I+++Q EIP V V A+ +I D +P++ L I+ PNE+E
Sbjct: 118 IKRADIIIMQLEIPLEVVEYVKTLAQEK--LIILDPAPAQDDLPKQFLEGFTIVKPNETE 175
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV- 316
L L G ++ E++ + + G+Q V+V LG G+ L + K A +V
Sbjct: 176 LQTLIGKKLETKEELISGAEELLEKGIQTVIVTLGGDGALLVTKD----KTEYFKAQKVT 231
Query: 317 -IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+DTT AGD FTA+ A+ +GK+ E ++F + + + V KGA S+P
Sbjct: 232 AVDTTAAGDCFTAALALALSKGKAYAEAIQFGNSVSGIVVTRKGAQTSIP 281
>gi|411007407|ref|ZP_11383736.1| ribokinase [Streptomyces globisporus C-1027]
Length = 296
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 162/301 (53%), Gaps = 13/301 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ R P GETV + +T+ GGKGANQA A+ +G VG+
Sbjct: 4 IAVLGSTNMDLVAYTARAPGRGETVTGREFRTIPGGKGANQAVAAARAGGEVMMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + + L GV D ++ + P+G A +++ G N+I++V G N
Sbjct: 64 DAYGAQLREGLEHAGVDTDLLHTAEG---PSGTAHIVVDDTGSNAIVVVPGANGVVT--T 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
G ++ + + I+L+Q E+P S ++ A+AAR+ GV I + P+P ELL+ ID
Sbjct: 119 LGPGEIAAIAASEILLMQLELPLSAVVEGARAARAQGVRTILTPAPVQ-PLPDELLDHID 177
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L PNE E L+G D ++ +++ V +V+V LGAKG G +P+
Sbjct: 178 LLVPNEHEAAELSGQ--DEPHAAAQILLRR----VPEVIVTLGAKGCLYAARGGEPVLFE 231
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P+ +DTTGAGDTF + AV EG+ + FA+AAA+LCVQ GA SMP R
Sbjct: 232 -APSVTAVDTTGAGDTFVGALAVALGEGRPVAGAVAFASAAAALCVQKPGASTSMPYRSE 290
Query: 370 V 370
+
Sbjct: 291 I 291
>gi|345875127|ref|ZP_08826923.1| ribokinase [Neisseria weaveri LMG 5135]
gi|343969554|gb|EGV37766.1| ribokinase [Neisseria weaveri LMG 5135]
Length = 304
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 161/310 (51%), Gaps = 20/310 (6%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D+ R P+VGET+ + GGKGANQA A+L VG V
Sbjct: 4 PRITVIGSINMDLVTSAPRFPQVGETLLGTDFRQFMGGKGANQAVAAARLGAQVDLVGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+ ++D L V D + V G PTG A + + ++G N II+V G N + P
Sbjct: 64 GDDAFGRELSDGLVQENVNTDGVATVS--GRPTGMANITV-AEGDNHIIVVSGANFAVTP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQEL 244
E E ++ +A IV+ Q E P I+ AK A+ G P I + AP +PQEL
Sbjct: 121 EHIRQEAQRII-EADIVMAQLETPLDAVIEAAKTAKQHGKPFILNP----APAQKLPQEL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L + +L+PN EL G+ S E E +++ V++ LGA+G ALF +G+
Sbjct: 176 LELVTVLTPNAYELAISLGL---SAEMPPEELIRHSPC---PVVMTLGAEG-ALFSDGKG 228
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ + +DTTGAGDTF A+ A + G +E ++ A AAA++ V GA M
Sbjct: 229 GLHRQASFKVTPVDTTGAGDTFNAALARYWHLG--LQEAVKLACAAAAISVTQAGAQSGM 286
Query: 365 PDRKSVLNLL 374
P K++ L
Sbjct: 287 PSEKTLRQFL 296
>gi|425055026|ref|ZP_18458519.1| ribokinase [Enterococcus faecium 505]
gi|403034747|gb|EJY46175.1| ribokinase [Enterococcus faecium 505]
Length = 307
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 161/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + ++PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTKMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGT 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIEGAATGQAMIMVDAAGENSILIHAGAN-NAFHEP 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ E++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVRKNKELITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ ++ + A K H++G+ V++ LG+ G+ F +K +
Sbjct: 181 IIIPNETETEIITGIRVTDHDSLVAAAEKMHELGIGTVIITLGSVGA--FYHTKK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + + + +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLGNLKEAILYGNLASSIAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+S+
Sbjct: 297 RESL 300
>gi|399887524|ref|ZP_10773401.1| ribokinase [Clostridium arbusti SL206]
Length = 307
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 166/302 (54%), Gaps = 18/302 (5%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D+ ++++ +PKVGET+ ++ + + GGKGANQA + + +G+VG+D
Sbjct: 6 VLGSINMDLVIKVNSMPKVGETILSEDMKKIPGGKGANQAIAAKRSGAEVHIIGKVGKDE 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
GK++T+ LS G+ + N+ KD TG A++ + G NSII+V G+NMS +
Sbjct: 66 YGKVLTEKLSEDGIEIK--NIFKDDNKNTGMALITVNKAGNNSIIVVPGSNMSISKKDIL 123
Query: 192 DEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
+ V+ I++ Q E+P + V A + + V+ + + I ++L+ D+
Sbjct: 124 KAE-SVIGYCDILVSQLEVPIERVKEAFIIAKKYNKLTVLNPSPSKE--IHEQLMKNTDM 180
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
+ PNE+E LTG+ E +A + GV+ V++ LG KG+A+ E I
Sbjct: 181 IIPNETEAYDLTGIKVQDLESCRKAAQFFIERGVKVVIITLGEKGAAIITENH----GEI 236
Query: 311 IPAAR--VIDTTGAGDTFTASFAVGFVEGK-----SREECLRFAAAAASLCVQVKGAIPS 363
IPA R V+DTT AGD+F + V ++ K S +E ++F +S+ +Q KGA PS
Sbjct: 237 IPAYRVKVVDTTAAGDSFLGAL-VSKIDSKDISFESIKEGVKFGNQVSSITIQRKGAQPS 295
Query: 364 MP 365
+P
Sbjct: 296 IP 297
>gi|254876161|ref|ZP_05248871.1| ribokinase [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842182|gb|EET20596.1| ribokinase [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 306
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 152/297 (51%), Gaps = 5/297 (1%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GSAN D+ V++D+L + G+T+ ++ + GGKGANQA +L F+ +G
Sbjct: 2 SVVVIGSANRDLVVKVDQLAQKGQTIISQNYEEFCGGKGANQAVAARRLGENVTFITNLG 61
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D+ G + + G LD + + +D TG A + + S GQN I +V G N +
Sbjct: 62 KDSFGDRLLEFYKKEG--LDSLTINQDSSSNTGLAFICVDSQGQNIINVVMGANAK-LDQ 118
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D+ + +++A I+L Q E P +A ++ A + +PQELL +
Sbjct: 119 QVLDKHNQKIQQANIILTQLETPLETIEYLANKITDKQTFILNPAPARE--LPQELLKKV 176
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DIL+PNE+E L+G+ +A + H GV V++ LG +G+ L + K
Sbjct: 177 DILTPNETEASILSGIEVKDVNTAKQAANELHNKGVSTVIITLGEQGALLSKNNGQEQKL 236
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
V+DTT AGDTF A +G S E+ + A AA+L V V+GA S P
Sbjct: 237 FATKKVDVVDTTAAGDTFNGVLAFCLDKGLSIEQSIEIANTAAALAVTVEGAEDSAP 293
>gi|427413267|ref|ZP_18903459.1| ribokinase [Veillonella ratti ACS-216-V-Col6b]
gi|425716083|gb|EKU79069.1| ribokinase [Veillonella ratti ACS-216-V-Col6b]
Length = 296
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 155/312 (49%), Gaps = 30/312 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA AKL VG +G+
Sbjct: 4 IVVIGSCNMDITVMADKRPTAGETIMGSGLNISPGGKGANQAVAAAKLMAQVTMVGCIGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+++ D L + DY+ V++ T H + ++G NSII++ G N EK
Sbjct: 64 DAYGRMVLDNLHKYNINTDYLTVIEGENSGTAHITL---AEGDNSIIVIAGANAKV-DEK 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN--F 247
D + + KA +VL+Q EIP S + + G+ V+ + P P L+ +
Sbjct: 120 VVDNAWDAIMKADLVLVQNEIPLSTIGYITEKCSKNGIKVLLN------PAPAADLDPAW 173
Query: 248 ID---ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
+D ++PNE EL L P+ S +EA + ++ +++V LG +G A G
Sbjct: 174 LDAATYITPNEHELAAL--YPSQS----TEATMLANE---GKIIVTLGKEGVAYAQGG-- 222
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
K +P V +DTTGAGDTF +FA KS EE L++ AAA+L + GA
Sbjct: 223 --KVHTVPGFTVTPVDTTGAGDTFNGAFATAVANNKSMEEALQYGNAAAALSILKLGAQE 280
Query: 363 SMPDRKSVLNLL 374
MP V L
Sbjct: 281 GMPTADEVAAFL 292
>gi|423214219|ref|ZP_17200747.1| ribokinase [Bacteroides xylanisolvens CL03T12C04]
gi|392693164|gb|EIY86399.1| ribokinase [Bacteroides xylanisolvens CL03T12C04]
Length = 321
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 168/325 (51%), Gaps = 32/325 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D+ ++ LP GETV GGKGANQA A+L FV +G
Sbjct: 3 VVVIGSSNIDMVAQVSHLPAPGETVGDANFMQSLGGKGANQAVAAARLGGSVTFVTSLGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D ++ + G+ DY ++ D PTG A++ + + G+N I + G N S P
Sbjct: 63 DMYADILKNHFKKEGIATDY--IIDDVNHPTGTALIFVANSGENCIAVAPGANYSLLPGS 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
EV+ +A I+++Q EIP ++A +A+ G V+F+ AP I +EL+
Sbjct: 121 ITHFS-EVIDEADIIVMQAEIPYETIKKIALSAKQKGKKVLFNP----APACLIDEELMK 175
Query: 247 FIDILSPNESELGRLTGM--PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
IDIL NE E ++G+ ++ E+I++ ++K G V++ LG++G ++++ K
Sbjct: 176 AIDILVVNELEAAFISGIDYTDNNLEEIAKTLLKA---GTSNVVITLGSQG--VYMKNRK 230
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
Q +P +V IDT AGDTF + AV + + E L FA AA++ V GA P
Sbjct: 231 ETIQ--LPGCKVNAIDTIAAGDTFCGALAVFCAQREIDREALSFANTAAAIAVTRSGAQP 288
Query: 363 SMP-----------DRKSVLNLLQY 376
S+P + ++LNL+ +
Sbjct: 289 SIPTLDEVKHFILENESTLLNLMNH 313
>gi|297622951|ref|YP_003704385.1| ribokinase [Truepera radiovictrix DSM 17093]
gi|297164131|gb|ADI13842.1| ribokinase [Truepera radiovictrix DSM 17093]
Length = 299
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 155/310 (50%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ V + R P+ GET+ +T GGKGANQA A+ P VG+VG
Sbjct: 2 IVVVGSLNMDLVVRVPRAPRPGETLLGSGYETHPGGKGANQAVAAARFGAPVRMVGRVGR 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + L+ G+ L ++ D TG A + + GQNSII+ G N + PE
Sbjct: 62 DAYGDPLAHRLAAEGIDLGFLEQTDD---KTGVAFITVDEAGQNSIIVAPGANAALRPED 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ V + A +VL+Q EIP ++ A R+AG V+ + A + L +D
Sbjct: 119 LTE---RVFEGAEVVLVQLEIPLKTALRAAALGRAAGARVLLNLAPAQA-LSAAQLGDVD 174
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L NE E L G P + + A+ + V V++ LG +G+A P
Sbjct: 175 LLLVNEHEAATLLGAP-EVLGDLGAALAGLRRF-VPAVVLTLGGRGAAW----AGPEGSG 228
Query: 310 IIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ PA RV+DTT AGD F + A G + E +R+A AA +L V GA PS+P R
Sbjct: 229 LEPAHRVRVVDTTAAGDAFAGALAAELARGATLEAAVRYAGAAGALAVSRSGAQPSLPTR 288
Query: 368 KSVLNLLQYA 377
+ LL+ A
Sbjct: 289 EEAERLLRGA 298
>gi|410028008|ref|ZP_11277844.1| ribokinase [Marinilabilia sp. AK2]
Length = 305
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 153/305 (50%), Gaps = 10/305 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P ++V+GSAN D+ ++ D P GET+ + GGKGANQA A+L F+ ++
Sbjct: 5 PKILVIGSANMDMVIQSDHFPAPGETIIGGKFSLIPGGKGANQAVAAARLGGEVCFLSKL 64
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D G+ G+ ++ + + +P+G A++ + G+N+II+ G N P
Sbjct: 65 GQDIFGQQNLFNYQNEGIDCQFVGQIPE--IPSGVALITVDKHGENTIIVAPGANHQLLP 122
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ D+ + A ++LLQ EIP + + G +I + P+ ELL+
Sbjct: 123 DDL-DKGRSAFESADMILLQLEIPMETVLAAVNLGSALGKRIILNPAPA-GPLSDELLSK 180
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+ ++SPNE+E LTG+ +A + VQ V++ +GA G+ L
Sbjct: 181 LFLISPNETEAEFLTGIKVHDESSAKKAAQYFLQKDVQHVIITMGASGAYLHTNN----F 236
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ I+P +V ID+T AGDTF + AV EGK ++FA AA+L VQ GA S+P
Sbjct: 237 EGILPTDKVIAIDSTAAGDTFNGALAVALGEGKDMVYAVKFALKAATLSVQRMGAQTSIP 296
Query: 366 DRKSV 370
+
Sbjct: 297 HMHEI 301
>gi|300714607|ref|YP_003739410.1| ribokinase [Erwinia billingiae Eb661]
gi|299060443|emb|CAX57550.1| Ribokinase [Erwinia billingiae Eb661]
Length = 309
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 160/313 (51%), Gaps = 8/313 (2%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+ TP L V+GS N D + ++ P+ GETV K Q GGKGANQA + F
Sbjct: 1 MKTPGKLAVLGSINADHILNLNTFPRPGETVIGKHYQIAFGGKGANQAVAAGRSGADIAF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ VGED G+ I + L+ + + + V+ G TG A++ + ++G+NSI I G N
Sbjct: 61 IACVGEDDIGQRIREQLNKDNIDVSPVEVI--AGDSTGVALIFVNAEGENSIAIHSGANA 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ P + + +AG +L+Q E P + AK A VI + P+ E
Sbjct: 119 ALTPAIVIKHQ-KTIAEAGALLMQLESPLDSVLAAAKIAHQHQTKVILNPAPA-TPLSDE 176
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL +D+++PNE+E LTG+ DS E + A H G+ VL+ LG++G L +G+
Sbjct: 177 LLALVDMITPNETEAEILTGVHIDSDEDAARAAAVLHDKGIHSVLITLGSRGVWLSEQGD 236
Query: 304 -KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+ I + A +DT AGDTF + ++ + + +RFA AAA++ V GA P
Sbjct: 237 GQRIAGFKVDA---VDTIAAGDTFNGALITALLDEQPMAQAVRFAHAAAAISVTRSGAQP 293
Query: 363 SMPDRKSVLNLLQ 375
S+P R + LQ
Sbjct: 294 SVPWRHETDSFLQ 306
>gi|157374263|ref|YP_001472863.1| ribokinase [Shewanella sediminis HAW-EB3]
gi|157316637|gb|ABV35735.1| ribokinase [Shewanella sediminis HAW-EB3]
Length = 403
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 160/298 (53%), Gaps = 8/298 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N DI +++R P+ GET+ + ++ AGGKGANQA AK F+ ++G+
Sbjct: 105 IFILGSFNVDIVAKLERFPQPGETLHSLSNNIGAGGKGANQAYAAAKSGANVTFMTKIGK 164
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPE 188
D + L+G G+ D +V+ PTG+A++ + + G+N I + G N +
Sbjct: 165 DQFSHFAKEHLAGTGI--DNTIIVESETSPTGNALIYVCEQTGENMIAVHSGANTEITQD 222
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + +V A + L Q E Q AR+ GV V+ + P ELL F+
Sbjct: 223 EILQAEQHIV-GANLFLTQLENNIDAIKQSMMIARNHGVKVVLNPAPYHDETP-ELLEFV 280
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D+++PNE+E +TG+ +A K ++MGV V++ G++G L+ E E+ I+
Sbjct: 281 DVITPNETEASLMTGIEVTDLSSAKQAAEKINQMGVNTVVITRGSQGVLLY-ENERFIEI 339
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ I A V DTTGAGD F + V+G++ + ++A A ASL V+ +GA +MPD
Sbjct: 340 AAIKCA-VTDTTGAGDAFNGALVARLVKGETLHDAGKYANAYASLAVEREGA-ANMPD 395
>gi|69244439|ref|ZP_00602855.1| Carbohydrate kinase, PfkB [Enterococcus faecium DO]
gi|257879053|ref|ZP_05658706.1| carbohydrate kinase [Enterococcus faecium 1,230,933]
gi|257881679|ref|ZP_05661332.1| carbohydrate kinase [Enterococcus faecium 1,231,502]
gi|257890907|ref|ZP_05670560.1| carbohydrate kinase [Enterococcus faecium 1,231,410]
gi|260558578|ref|ZP_05830774.1| carbohydrate kinase [Enterococcus faecium C68]
gi|261206765|ref|ZP_05921456.1| carbohydrate kinase [Enterococcus faecium TC 6]
gi|289566446|ref|ZP_06446872.1| ribokinase [Enterococcus faecium D344SRF]
gi|293559551|ref|ZP_06676086.1| ribokinase [Enterococcus faecium E1162]
gi|293570145|ref|ZP_06681224.1| ribokinase [Enterococcus faecium E1071]
gi|294615244|ref|ZP_06695123.1| ribokinase [Enterococcus faecium E1636]
gi|294618937|ref|ZP_06698441.1| ribokinase [Enterococcus faecium E1679]
gi|314939651|ref|ZP_07846876.1| ribokinase [Enterococcus faecium TX0133a04]
gi|314943982|ref|ZP_07850683.1| ribokinase [Enterococcus faecium TX0133C]
gi|314948610|ref|ZP_07851986.1| ribokinase [Enterococcus faecium TX0082]
gi|314953868|ref|ZP_07856731.1| ribokinase [Enterococcus faecium TX0133A]
gi|314993539|ref|ZP_07858895.1| ribokinase [Enterococcus faecium TX0133B]
gi|314997052|ref|ZP_07862042.1| ribokinase [Enterococcus faecium TX0133a01]
gi|383327762|ref|YP_005353646.1| ribokinase [Enterococcus faecium Aus0004]
gi|389867635|ref|YP_006375058.1| ribokinase [Enterococcus faecium DO]
gi|406580040|ref|ZP_11055262.1| ribokinase [Enterococcus sp. GMD4E]
gi|406582262|ref|ZP_11057390.1| ribokinase [Enterococcus sp. GMD3E]
gi|406584499|ref|ZP_11059528.1| ribokinase [Enterococcus sp. GMD2E]
gi|406591621|ref|ZP_11065882.1| ribokinase [Enterococcus sp. GMD1E]
gi|410935948|ref|ZP_11367821.1| ribokinase [Enterococcus sp. GMD5E]
gi|415890550|ref|ZP_11549503.1| ribokinase [Enterococcus faecium E4453]
gi|424793452|ref|ZP_18219559.1| ribokinase [Enterococcus faecium V689]
gi|424796409|ref|ZP_18222140.1| ribokinase [Enterococcus faecium S447]
gi|424848079|ref|ZP_18272602.1| ribokinase [Enterococcus faecium R501]
gi|424913431|ref|ZP_18336798.1| ribokinase [Enterococcus faecium R497]
gi|424951913|ref|ZP_18366965.1| ribokinase [Enterococcus faecium R496]
gi|424954944|ref|ZP_18369813.1| ribokinase [Enterococcus faecium R494]
gi|424956946|ref|ZP_18371700.1| ribokinase [Enterococcus faecium R446]
gi|424961205|ref|ZP_18375662.1| ribokinase [Enterococcus faecium P1986]
gi|424965425|ref|ZP_18379409.1| ribokinase [Enterococcus faecium P1190]
gi|424967061|ref|ZP_18380797.1| ribokinase [Enterococcus faecium P1140]
gi|424972799|ref|ZP_18386120.1| ribokinase [Enterococcus faecium P1139]
gi|424974893|ref|ZP_18388101.1| ribokinase [Enterococcus faecium P1137]
gi|424979173|ref|ZP_18392035.1| ribokinase [Enterococcus faecium P1123]
gi|424979881|ref|ZP_18392711.1| ribokinase [Enterococcus faecium ERV99]
gi|424984938|ref|ZP_18397448.1| ribokinase [Enterococcus faecium ERV69]
gi|424988678|ref|ZP_18400983.1| ribokinase [Enterococcus faecium ERV38]
gi|424992066|ref|ZP_18404163.1| ribokinase [Enterococcus faecium ERV26]
gi|424996186|ref|ZP_18408006.1| ribokinase [Enterococcus faecium ERV168]
gi|424999503|ref|ZP_18411116.1| ribokinase [Enterococcus faecium ERV165]
gi|425001231|ref|ZP_18412753.1| ribokinase [Enterococcus faecium ERV161]
gi|425005613|ref|ZP_18416837.1| ribokinase [Enterococcus faecium ERV102]
gi|425008722|ref|ZP_18419789.1| ribokinase [Enterococcus faecium ERV1]
gi|425012358|ref|ZP_18423178.1| ribokinase [Enterococcus faecium E422]
gi|425015409|ref|ZP_18426032.1| ribokinase [Enterococcus faecium E417]
gi|425018105|ref|ZP_18428579.1| ribokinase [Enterococcus faecium C621]
gi|425030475|ref|ZP_18435650.1| ribokinase [Enterococcus faecium C1904]
gi|425031718|ref|ZP_18436831.1| ribokinase [Enterococcus faecium 515]
gi|425036021|ref|ZP_18440823.1| ribokinase [Enterococcus faecium 514]
gi|425039966|ref|ZP_18444463.1| ribokinase [Enterococcus faecium 513]
gi|425042293|ref|ZP_18446638.1| ribokinase [Enterococcus faecium 511]
gi|425047099|ref|ZP_18451075.1| ribokinase [Enterococcus faecium 510]
gi|425048611|ref|ZP_18452506.1| ribokinase [Enterococcus faecium 509]
gi|425051023|ref|ZP_18454716.1| ribokinase [Enterococcus faecium 506]
gi|425062390|ref|ZP_18465551.1| ribokinase [Enterococcus faecium 503]
gi|427397266|ref|ZP_18889892.1| ribokinase [Enterococcus durans FB129-CNAB-4]
gi|430821186|ref|ZP_19439799.1| ribokinase [Enterococcus faecium E0045]
gi|430823611|ref|ZP_19442181.1| ribokinase [Enterococcus faecium E0120]
gi|430826124|ref|ZP_19444315.1| ribokinase [Enterococcus faecium E0164]
gi|430829105|ref|ZP_19447204.1| ribokinase [Enterococcus faecium E0269]
gi|430832158|ref|ZP_19450206.1| ribokinase [Enterococcus faecium E0333]
gi|430837317|ref|ZP_19455288.1| ribokinase [Enterococcus faecium E0680]
gi|430843384|ref|ZP_19461284.1| ribokinase [Enterococcus faecium E1050]
gi|430851453|ref|ZP_19469202.1| ribokinase [Enterococcus faecium E1185]
gi|430855415|ref|ZP_19473123.1| ribokinase [Enterococcus faecium E1392]
gi|430861691|ref|ZP_19479155.1| ribokinase [Enterococcus faecium E1573]
gi|430866671|ref|ZP_19481919.1| ribokinase [Enterococcus faecium E1574]
gi|430908225|ref|ZP_19485058.1| ribokinase [Enterococcus faecium E1575]
gi|430955857|ref|ZP_19486657.1| ribokinase [Enterococcus faecium E1576]
gi|431000972|ref|ZP_19488453.1| ribokinase [Enterococcus faecium E1578]
gi|431156334|ref|ZP_19499674.1| ribokinase [Enterococcus faecium E1620]
gi|431231652|ref|ZP_19502695.1| ribokinase [Enterococcus faecium E1622]
gi|431257781|ref|ZP_19505064.1| ribokinase [Enterococcus faecium E1623]
gi|431303211|ref|ZP_19508058.1| ribokinase [Enterococcus faecium E1626]
gi|431377762|ref|ZP_19510548.1| ribokinase [Enterococcus faecium E1627]
gi|431504163|ref|ZP_19515383.1| ribokinase [Enterococcus faecium E1634]
gi|431542715|ref|ZP_19518377.1| ribokinase [Enterococcus faecium E1731]
gi|431669649|ref|ZP_19524186.1| ribokinase [Enterococcus faecium E1904]
gi|431744316|ref|ZP_19533187.1| ribokinase [Enterococcus faecium E2071]
gi|431746916|ref|ZP_19535729.1| ribokinase [Enterococcus faecium E2134]
gi|431748203|ref|ZP_19536965.1| ribokinase [Enterococcus faecium E2297]
gi|431753735|ref|ZP_19542402.1| ribokinase [Enterococcus faecium E2883]
gi|431765204|ref|ZP_19553721.1| ribokinase [Enterococcus faecium E4215]
gi|431768924|ref|ZP_19557356.1| ribokinase [Enterococcus faecium E1321]
gi|431769736|ref|ZP_19558141.1| ribokinase [Enterococcus faecium E1644]
gi|431773594|ref|ZP_19561916.1| ribokinase [Enterococcus faecium E2369]
gi|431776705|ref|ZP_19564965.1| ribokinase [Enterococcus faecium E2560]
gi|431780611|ref|ZP_19568785.1| ribokinase [Enterococcus faecium E4389]
gi|431782821|ref|ZP_19570950.1| ribokinase [Enterococcus faecium E6012]
gi|431784644|ref|ZP_19572681.1| ribokinase [Enterococcus faecium E6045]
gi|447911905|ref|YP_007393317.1| Ribokinase [Enterococcus faecium NRRL B-2354]
gi|68196380|gb|EAN10808.1| Carbohydrate kinase, PfkB [Enterococcus faecium DO]
gi|257813281|gb|EEV42039.1| carbohydrate kinase [Enterococcus faecium 1,230,933]
gi|257817337|gb|EEV44665.1| carbohydrate kinase [Enterococcus faecium 1,231,502]
gi|257827267|gb|EEV53893.1| carbohydrate kinase [Enterococcus faecium 1,231,410]
gi|260075752|gb|EEW64058.1| carbohydrate kinase [Enterococcus faecium C68]
gi|260078895|gb|EEW66595.1| carbohydrate kinase [Enterococcus faecium TC 6]
gi|289161767|gb|EFD09641.1| ribokinase [Enterococcus faecium D344SRF]
gi|291587344|gb|EFF19229.1| ribokinase [Enterococcus faecium E1071]
gi|291591883|gb|EFF23513.1| ribokinase [Enterococcus faecium E1636]
gi|291594819|gb|EFF26192.1| ribokinase [Enterococcus faecium E1679]
gi|291606503|gb|EFF35902.1| ribokinase [Enterococcus faecium E1162]
gi|313588823|gb|EFR67668.1| ribokinase [Enterococcus faecium TX0133a01]
gi|313591976|gb|EFR70821.1| ribokinase [Enterococcus faecium TX0133B]
gi|313594203|gb|EFR73048.1| ribokinase [Enterococcus faecium TX0133A]
gi|313597406|gb|EFR76251.1| ribokinase [Enterococcus faecium TX0133C]
gi|313641060|gb|EFS05640.1| ribokinase [Enterococcus faecium TX0133a04]
gi|313644987|gb|EFS09567.1| ribokinase [Enterococcus faecium TX0082]
gi|364094449|gb|EHM36622.1| ribokinase [Enterococcus faecium E4453]
gi|378937456|gb|AFC62528.1| ribokinase [Enterococcus faecium Aus0004]
gi|388532884|gb|AFK58076.1| ribokinase [Enterococcus faecium DO]
gi|402916142|gb|EJX37046.1| ribokinase [Enterococcus faecium V689]
gi|402918260|gb|EJX38970.1| ribokinase [Enterococcus faecium R501]
gi|402923074|gb|EJX43402.1| ribokinase [Enterococcus faecium S447]
gi|402926968|gb|EJX46961.1| ribokinase [Enterococcus faecium R497]
gi|402928367|gb|EJX48233.1| ribokinase [Enterococcus faecium R496]
gi|402935275|gb|EJX54536.1| ribokinase [Enterococcus faecium R494]
gi|402943732|gb|EJX62200.1| ribokinase [Enterococcus faecium P1190]
gi|402944534|gb|EJX62940.1| ribokinase [Enterococcus faecium P1986]
gi|402944769|gb|EJX63162.1| ribokinase [Enterococcus faecium R446]
gi|402952701|gb|EJX70484.1| ribokinase [Enterococcus faecium P1139]
gi|402955096|gb|EJX72659.1| ribokinase [Enterococcus faecium P1140]
gi|402955288|gb|EJX72829.1| ribokinase [Enterococcus faecium P1137]
gi|402959138|gb|EJX76414.1| ribokinase [Enterococcus faecium P1123]
gi|402967466|gb|EJX84016.1| ribokinase [Enterococcus faecium ERV69]
gi|402967992|gb|EJX84500.1| ribokinase [Enterococcus faecium ERV99]
gi|402971281|gb|EJX87566.1| ribokinase [Enterococcus faecium ERV38]
gi|402974486|gb|EJX90534.1| ribokinase [Enterococcus faecium ERV168]
gi|402974712|gb|EJX90735.1| ribokinase [Enterococcus faecium ERV26]
gi|402978691|gb|EJX94415.1| ribokinase [Enterococcus faecium ERV165]
gi|402985505|gb|EJY00707.1| ribokinase [Enterococcus faecium ERV102]
gi|402987145|gb|EJY02235.1| ribokinase [Enterococcus faecium ERV161]
gi|402991767|gb|EJY06516.1| ribokinase [Enterococcus faecium ERV1]
gi|402993559|gb|EJY08158.1| ribokinase [Enterococcus faecium E422]
gi|402995679|gb|EJY10119.1| ribokinase [Enterococcus faecium E417]
gi|403002887|gb|EJY16821.1| ribokinase [Enterococcus faecium C1904]
gi|403003002|gb|EJY16929.1| ribokinase [Enterococcus faecium C621]
gi|403014081|gb|EJY27100.1| ribokinase [Enterococcus faecium 513]
gi|403015038|gb|EJY27984.1| ribokinase [Enterococcus faecium 515]
gi|403016182|gb|EJY29012.1| ribokinase [Enterococcus faecium 514]
gi|403022517|gb|EJY34876.1| ribokinase [Enterococcus faecium 510]
gi|403023734|gb|EJY35956.1| ribokinase [Enterococcus faecium 511]
gi|403030224|gb|EJY41929.1| ribokinase [Enterococcus faecium 509]
gi|403038619|gb|EJY49826.1| ribokinase [Enterococcus faecium 503]
gi|403038959|gb|EJY50141.1| ribokinase [Enterococcus faecium 506]
gi|404454697|gb|EKA01606.1| ribokinase [Enterococcus sp. GMD4E]
gi|404458332|gb|EKA04769.1| ribokinase [Enterococcus sp. GMD3E]
gi|404463999|gb|EKA09569.1| ribokinase [Enterococcus sp. GMD2E]
gi|404467476|gb|EKA12582.1| ribokinase [Enterococcus sp. GMD1E]
gi|410735657|gb|EKQ77565.1| ribokinase [Enterococcus sp. GMD5E]
gi|425722592|gb|EKU85487.1| ribokinase [Enterococcus durans FB129-CNAB-4]
gi|430438820|gb|ELA49225.1| ribokinase [Enterococcus faecium E0045]
gi|430442010|gb|ELA52076.1| ribokinase [Enterococcus faecium E0120]
gi|430445340|gb|ELA55096.1| ribokinase [Enterococcus faecium E0164]
gi|430480799|gb|ELA57973.1| ribokinase [Enterococcus faecium E0333]
gi|430481606|gb|ELA58757.1| ribokinase [Enterococcus faecium E0269]
gi|430487428|gb|ELA64165.1| ribokinase [Enterococcus faecium E0680]
gi|430497835|gb|ELA73863.1| ribokinase [Enterococcus faecium E1050]
gi|430534148|gb|ELA74616.1| ribokinase [Enterococcus faecium E1185]
gi|430546470|gb|ELA86413.1| ribokinase [Enterococcus faecium E1392]
gi|430549730|gb|ELA89545.1| ribokinase [Enterococcus faecium E1573]
gi|430551347|gb|ELA91114.1| ribokinase [Enterococcus faecium E1574]
gi|430554369|gb|ELA93981.1| ribokinase [Enterococcus faecium E1575]
gi|430557040|gb|ELA96522.1| ribokinase [Enterococcus faecium E1576]
gi|430562631|gb|ELB01863.1| ribokinase [Enterococcus faecium E1578]
gi|430573391|gb|ELB12206.1| ribokinase [Enterococcus faecium E1622]
gi|430575025|gb|ELB13778.1| ribokinase [Enterococcus faecium E1620]
gi|430577516|gb|ELB16113.1| ribokinase [Enterococcus faecium E1623]
gi|430579852|gb|ELB18332.1| ribokinase [Enterococcus faecium E1626]
gi|430582712|gb|ELB21128.1| ribokinase [Enterococcus faecium E1627]
gi|430587427|gb|ELB25653.1| ribokinase [Enterococcus faecium E1634]
gi|430592638|gb|ELB30643.1| ribokinase [Enterococcus faecium E1731]
gi|430599871|gb|ELB37559.1| ribokinase [Enterococcus faecium E1904]
gi|430605563|gb|ELB42956.1| ribokinase [Enterococcus faecium E2071]
gi|430607944|gb|ELB45239.1| ribokinase [Enterococcus faecium E2134]
gi|430614256|gb|ELB51244.1| ribokinase [Enterococcus faecium E2297]
gi|430621068|gb|ELB57856.1| ribokinase [Enterococcus faecium E2883]
gi|430628351|gb|ELB64793.1| ribokinase [Enterococcus faecium E1321]
gi|430628901|gb|ELB65325.1| ribokinase [Enterococcus faecium E4215]
gi|430636178|gb|ELB72252.1| ribokinase [Enterococcus faecium E2369]
gi|430636365|gb|ELB72431.1| ribokinase [Enterococcus faecium E1644]
gi|430639350|gb|ELB75224.1| ribokinase [Enterococcus faecium E4389]
gi|430640542|gb|ELB76377.1| ribokinase [Enterococcus faecium E2560]
gi|430646675|gb|ELB82144.1| ribokinase [Enterococcus faecium E6012]
gi|430649048|gb|ELB84436.1| ribokinase [Enterococcus faecium E6045]
gi|445187614|gb|AGE29256.1| Ribokinase [Enterococcus faecium NRRL B-2354]
Length = 305
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|293393668|ref|ZP_06637977.1| ribokinase [Serratia odorifera DSM 4582]
gi|291423790|gb|EFE97010.1| ribokinase [Serratia odorifera DSM 4582]
Length = 308
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 160/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + +D+ P+ GETV K + GGKGANQA + F+ VG
Sbjct: 6 LVVLGSINADHILNVDQFPRPGETVIGKQYKVAFGGKGANQAVAAGRSGADIAFIACVGA 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I L+G ++D V G TG A++ + DG+N I I G N + P+
Sbjct: 66 DDIGERIRQQLAGD--QIDTQPVEAIDGSTTGVALIFVNGDGENVIGIDAGANAALTPQY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
V+ A + L+Q E P I A+ A+ VI + AP +P ELL
Sbjct: 124 LERYRQSVIDAAAL-LMQLESPLESVIAAARLAKQHATRVILNP----APARELPDELLA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E RLTG+ ++ + A H G++ VL+ LG++G L G+
Sbjct: 179 MIDMITPNETEAQRLTGIAVNNDADAARAASVLHAKGIETVLITLGSRGVWLSENGDG-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++P RV +DT AGDTF + +EG++ + +RFA AAA++ V GA PS+
Sbjct: 237 --KLVPGFRVKAVDTIAAGDTFNGALLTALLEGQTLNQAVRFAHAAAAIAVTRPGAQPSV 294
Query: 365 PDRKSVLNLLQ 375
P R + LQ
Sbjct: 295 PWRAEIDAFLQ 305
>gi|383815595|ref|ZP_09971006.1| ribokinase [Serratia sp. M24T3]
gi|383295627|gb|EIC83950.1| ribokinase [Serratia sp. M24T3]
Length = 309
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 158/310 (50%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + + P+ GETV GGKGANQA + F+ VG
Sbjct: 6 LVVLGSINADHVLNVRQFPQPGETVMGSQYNVAFGGKGANQAVAAGRSGADISFIACVGS 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + + L+ + + +KD TG A++ + ++G+N I I G N S PE
Sbjct: 66 DEIGERVRNQLASDNIDTRPIEAIKD--TTTGVALIFVNAEGENVIGIDAGANKSLTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V A +L+Q E P I A+ A VI + AP +P ELL+
Sbjct: 124 LQRYQQHIVD-ASALLMQLESPLESVIAAARIAHENNTQVILNP----APACELPDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E +LTG+ + + + A H G+ V++ LG+KG L +GE
Sbjct: 179 LVDMITPNETEAEKLTGVKVSTADDAARAAKMLHDKGIATVIITLGSKGVWLSQQGEG-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+P +V +DT AGDTF + G +EGK ++ +RFA AAA++ V GA PS+
Sbjct: 237 --RSVPGFKVKAVDTIAAGDTFNGALITGLLEGKPMDQAVRFAHAAAAIAVTRAGAQPSV 294
Query: 365 PDRKSVLNLL 374
P R + + L
Sbjct: 295 PWRNEIDDFL 304
>gi|365903183|ref|ZP_09441006.1| ribokinase family sugar kinase [Lactobacillus malefermentans KCTC
3548]
Length = 305
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 167/307 (54%), Gaps = 15/307 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + I R+P+ GET+ + + AGGKGANQA A+ T F+G++G+
Sbjct: 5 VTVLGSLNVDTTLRIKRMPQPGETLQTENKSSAAGGKGANQAVAAARAGAETSFIGKIGK 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW-PE 188
D+ G+ + ++L +D ++ D V TG A ++L +GQNSI++ GG+N E
Sbjct: 65 DSAGQFMVESLKDD--HIDTSSIATDETVGTGSAFILLDEEGQNSILVYGGSNQQVQKAE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
ED +K A ++ Q E P + I+ K A++ GV I + A I ELL +
Sbjct: 123 VEAAEDK--IKNADFLIAQFETPQAAAIEAFKIAKANGVTTILNPAPA-ATIDPELLKYS 179
Query: 249 DILSPNESELGRLTGMP-TDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
DI++PNE+E LTG+ TD ++ A K +MGV+ +++ +G+KG A +
Sbjct: 180 DIVTPNETESATLTGIEVTDEASMVANA-EKFAEMGVKNLIITVGSKG-AFY---STAAG 234
Query: 308 QSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSM 364
+PA + +DTT AGDTF + + S + L FA A+S+ VQ GA+PS+
Sbjct: 235 HDFVPAFTVKAVDTTAAGDTFIGALSSQLKPDLSNIADALVFAQRASSITVQRLGAMPSI 294
Query: 365 PDRKSVL 371
P ++
Sbjct: 295 PTYDEII 301
>gi|116493427|ref|YP_805162.1| ribokinase family sugar kinase [Pediococcus pentosaceus ATCC 25745]
gi|421893739|ref|ZP_16324232.1| ribokinase protein [Pediococcus pentosaceus IE-3]
gi|116103577|gb|ABJ68720.1| Sugar kinase, ribokinase family [Pediococcus pentosaceus ATCC
25745]
gi|385273224|emb|CCG89604.1| ribokinase protein [Pediococcus pentosaceus IE-3]
Length = 302
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 158/305 (51%), Gaps = 12/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + ++PK GET+ K + GGKGANQA + T F+G VG
Sbjct: 4 VTIIGSINLDRTIRVKQMPKPGETMHTKEIFSAGGGKGANQAVAAKRSEAKTNFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + + L + + + + + TG A +++ G+N I+I G N + PE
Sbjct: 64 DDAGRAMLELLEHENIDMSGIETLDNQ--STGQAYIVVDDAGENQIMIHAGANTAFTPE- 120
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ +++K + ++ Q E DSV + K AR AGV I + +P +LL
Sbjct: 121 YVQSKADLIKNSDFIIAQFESSLDSVT-EAFKIAREAGVKTILNPAPAVEKVPSDLLAVT 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D++ PNE+E LTG+ + +A H G++ VL+ +G+KG+ V G K
Sbjct: 180 DMIIPNETETEILTGIEVTDEASMKKASKALHDEGIEAVLITIGSKGTFYDVNG----KS 235
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
IIPA +V +DTT AGDTF + + + S E+ + + A+SL VQ GA PS+P
Sbjct: 236 GIIPAFKVKAVDTTSAGDTFIGAMSTVLNKDFSNLEDAILYGNKASSLTVQRFGAQPSIP 295
Query: 366 DRKSV 370
+K +
Sbjct: 296 YKKEL 300
>gi|402304004|ref|ZP_10823083.1| ribokinase [Selenomonas sp. FOBRC9]
gi|400375930|gb|EJP28823.1| ribokinase [Selenomonas sp. FOBRC9]
Length = 314
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 143/305 (46%), Gaps = 6/305 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+P GET+ A GGKGANQA AK + V +VG
Sbjct: 4 IAVIGSNMVDLTAYIDRMPAPGETLEAPDFALGCGGKGANQAVAAAKYDADVWMVTKVGS 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D CGV Y V+ +G A + + GQNSI+I+ G N P
Sbjct: 64 DIFADNTIANFKACGVNTTY---VRKTEGSSGVAPIFVDRSGQNSILIIKGANNRLLPRD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE +KK G++LLQ EIP + G+PV+ + + E + D
Sbjct: 121 I-DEAEADLKKCGMILLQLEIPLETVYYAIDFGQKHGIPVLLNPAPATKDLSIEKVCACD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
PNE+EL LTGMP ++ E+I A G++ V+V +G +GS EK +
Sbjct: 180 FFVPNETELAILTGMPAETVEEIERAAETLLARGLKNVIVTMGGRGSLWMTGAEKYSLGA 239
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
AA +DT+GAGD F FA +V ++ A+A A+L V KG S P + +
Sbjct: 240 YQVAA--VDTSGAGDAFIGCFAGCYVRHGDVRAAMQTASAFAALSVTAKGTQMSYPAKDA 297
Query: 370 VLNLL 374
V +
Sbjct: 298 VETFI 302
>gi|227432321|ref|ZP_03914314.1| possible ribokinase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227351927|gb|EEJ42160.1| possible ribokinase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 316
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 161/311 (51%), Gaps = 11/311 (3%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFV 124
N +VV+GS N D +++ R+P VGET+ T GGKGANQA ++ F+
Sbjct: 13 NMTKNIVVLGSLNVDNIMKMPRMPLVGETMVLTEVTTAPGGKGANQAVAASRQGANVSFI 72
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
G VG DANG+ + L GV +D ++ D VPTG A +MLQ G N+I+I GG N +
Sbjct: 73 GAVGNDANGQFMRATLLTNGVNVDAVSTNSD--VPTGSAYIMLQESGANTILIHGGANQA 130
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
E D + ++ +A +++ Q E+P V + K A+ V I + + EL
Sbjct: 131 LTIE---DINTALIAQADVLIAQFEVPFEVILAAFKIAKKNNVQTILNPAPAVYELTSEL 187
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKC-HKMGVQQVLVKLGAKGSALFVEGE 303
+ DI+ PNE+E LTG+ + E + V GVQ+ ++ LG GS +G+
Sbjct: 188 MAVTDIVLPNETEAQLLTGINVINDEGVLNRVSDALQAKGVQRSIITLGEAGS-FIADGQ 246
Query: 304 KPIKQSIIPA-ARVIDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAI 361
K + + P V DTT AGDTF + A + + ++ ++ A A+++ V GAI
Sbjct: 247 K--RWWVQPEKVDVQDTTAAGDTFIGTLASVIAPDFSNLDDAVQRANIASAIAVTRPGAI 304
Query: 362 PSMPDRKSVLN 372
PS+P K V N
Sbjct: 305 PSIPTDKEVDN 315
>gi|417958175|ref|ZP_12601091.1| ribokinase [Neisseria weaveri ATCC 51223]
gi|343967237|gb|EGV35486.1| ribokinase [Neisseria weaveri ATCC 51223]
Length = 304
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 161/310 (51%), Gaps = 20/310 (6%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D+ R P+VGET+ + GGKGANQA A+L VG V
Sbjct: 4 PRITVIGSINMDLVTSAPRFPQVGETLLGTDFRQFMGGKGANQAVAAARLGAQVDLVGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+ ++D L V D + V G PTG A + + ++G N II+V G N + P
Sbjct: 64 GDDAFGRELSDGLVQENVNTDGVATVS--GRPTGMANITV-AEGDNHIIVVSGANFAVTP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQEL 244
E E ++ +A IV+ Q E P I+ AK A+ G P I + AP +PQEL
Sbjct: 121 EYIRQEAQRII-EADIVMAQLETPLDAVIEAAKTAKQHGKPFILNP----APAQKLPQEL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L + +L+PN EL G+ S E E +++ V++ LGA+G ALF +G+
Sbjct: 176 LELVTVLTPNAYELAISLGL---SAEMPPEELIRHSPC---PVVMTLGAEG-ALFSDGKG 228
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ + +DTTGAGDTF A+ A + G +E ++ A AAA++ V GA M
Sbjct: 229 GLHRQASFKVTPVDTTGAGDTFNAALARYWHLG--LQEAVKLACAAAAISVTQAGAQSGM 286
Query: 365 PDRKSVLNLL 374
P K++ L
Sbjct: 287 PSEKTLRQFL 296
>gi|374312018|ref|YP_005058448.1| Ribokinase [Granulicella mallensis MP5ACTX8]
gi|358754028|gb|AEU37418.1| Ribokinase [Granulicella mallensis MP5ACTX8]
Length = 329
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 154/307 (50%), Gaps = 18/307 (5%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
P+VVVGS N D+ + R+P GET+ + QT GGKGANQA A+L +G +G
Sbjct: 7 PIVVVGSINIDLVSRVPRIPHAGETIFGYSFQTHPGGKGANQAVGIARLGGAVKMIGMLG 66
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
DA GK + + LS GV + + V D TG A + + G+NSI++ G N+ P+
Sbjct: 67 RDAFGKEMREHLSKEGVDMTDVGDVDDA---TGIASIFVDDAGENSIVVTAGANLHVTPD 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
+ E+++ AG VL Q EIP + +++ VP+I D AP +P L
Sbjct: 124 LLRSK-AEILRTAGAVLTQLEIPVETVLCLSEMCAEMKVPLILDP----APAQTLPAGAL 178
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ ++PNE+E T E ++ G V++K GA GS L GE
Sbjct: 179 RGVTWMTPNETEAQFYAKGATTEEELVN----MLFNAGAHGVILKRGALGSVL--AGEDR 232
Query: 306 IKQSIIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I I R +DTT AGD F A+FAVG ++G + FA+ +A++ V GA PS+
Sbjct: 233 ITHRIAAHVVRAVDTTAAGDAFNAAFAVGLMKGYDPVQSAEFASVSAAISVTRAGAQPSL 292
Query: 365 PDRKSVL 371
V+
Sbjct: 293 ATWDEVM 299
>gi|330820111|ref|YP_004348973.1| Ribokinase [Burkholderia gladioli BSR3]
gi|327372106|gb|AEA63461.1| Ribokinase [Burkholderia gladioli BSR3]
Length = 298
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 149/295 (50%), Gaps = 10/295 (3%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V+ RLP GET+ T GGKGANQA A+L +G +G D G +
Sbjct: 1 MDLAVQAKRLPARGETLLGGDLATFGGGKGANQAVAAARLGASVAMLGCLGADDFGVQLR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
D L G+ +++ V GV +G AV+ + DG N+I++ G N P+ + +
Sbjct: 61 DGLQAEGIDTAHLHTVA--GVASGTAVITVAEDGANTIVVSPGANARLAPDHV-EAARDA 117
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
+ AG+++ Q E+P ++ A AG PV+ + P+P L +D L NE+E
Sbjct: 118 IDAAGLLICQLEVPLDTVLRAVALAARAGTPVLLNPAPAQ-PLPDALYRQVDFLILNETE 176
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV- 316
LTG+P D EA GV+ V+V LGA+G A + G+ + S +PA RV
Sbjct: 177 AQLLTGLPVDGPAAAREAAACLLAKGVKTVIVTLGAQG-AWYARGD---EASHLPAPRVE 232
Query: 317 -IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
IDTT AGDTF FA V G S + + F AA+L V +GA S+P + V
Sbjct: 233 AIDTTAAGDTFVGGFAAEHVRGASLRDAIEFGQQAAALSVTRQGAQASIPTQAEV 287
>gi|379719979|ref|YP_005312110.1| ribokinase [Paenibacillus mucilaginosus 3016]
gi|386722627|ref|YP_006188953.1| ribokinase [Paenibacillus mucilaginosus K02]
gi|378568651|gb|AFC28961.1| ribokinase [Paenibacillus mucilaginosus 3016]
gi|384089752|gb|AFH61188.1| ribokinase [Paenibacillus mucilaginosus K02]
Length = 304
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 153/305 (50%), Gaps = 10/305 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + VVGS N DI V + R+P VGETV + GGKGANQAA A+L +G V
Sbjct: 3 PKIAVVGSLNMDIVVSMARMPLVGETVQGSAVHYVPGGKGANQAAGAARLGAEVKMIGAV 62
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G + D+L GV + ++++ GV TG A + L + N I++V G N C
Sbjct: 63 GSDIFGTQLVDSLRAFGVDTEAIDMLP--GVETGTATI-LHTREDNCIVVVPGANARCSA 119
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ ++++A ++L+Q E+P + ARSAGV I + P+P ++L+
Sbjct: 120 DAVRRHH-ALIEQADLLLVQLEVPLDTVREALGIARSAGVRTILNPAPA-VPLPADILSL 177
Query: 248 IDILSPNESELGRLTGMPTDSYEQ-ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
DIL+PNE+EL L+ P +Q + E + ++ V+V GA GS+ E +
Sbjct: 178 ADILTPNETELALLSNQPVAETDQALMEQLAYWRELHEGTVVVTRGAIGSSYL---EAGV 234
Query: 307 KQSIIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
Q++ P +V DTTGAGD F + G + FA ASL V GA +P
Sbjct: 235 LQTVKPLKVKVADTTGAGDAFNGALGYCIAAGLPFRTAVDFACRTASLSVTKFGAQGGLP 294
Query: 366 DRKSV 370
V
Sbjct: 295 TWSEV 299
>gi|416410985|ref|ZP_11688685.1| Ribokinase [Crocosphaera watsonii WH 0003]
gi|357260384|gb|EHJ09811.1| Ribokinase [Crocosphaera watsonii WH 0003]
Length = 297
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 155/291 (53%), Gaps = 9/291 (3%)
Query: 86 RLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGV 145
LP+ GETV TL GGKGANQA AKL TYFVG+VG D+ G+ + L +
Sbjct: 7 HLPQPGETVIGDHFITLPGGKGANQAVATAKLGRLTYFVGRVGGDSFGRELLKRLET--L 64
Query: 146 RLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVL 205
+++ V D +G A++ +++ G+N+II++ G N + + +++ K ++L
Sbjct: 65 KINTQGVFIDQKTFSGVAMINVETSGENTIIVIPGANGNIDESDITRLE-KILSKTSLLL 123
Query: 206 LQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESELGRLTGMP 265
LQ EIP + A+ A+ GV V+ D +P L IDI++PN++E +L G P
Sbjct: 124 LQLEIPLAAVEMAAREAKELGVTVMLDPAPAPEKLPDRLYPLIDIITPNQNEAEKLVGFP 183
Query: 266 TDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARV--IDTTGAG 323
D+ E+I +A K GV+ V++KLG KG+ + E Q +PA +V IDT GAG
Sbjct: 184 LDNEEEIKKAANVLLKKGVKIVVIKLGDKGAFYATDKE----QDFVPAIKVKTIDTVGAG 239
Query: 324 DTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
D F A G +E L++ +L +GA ++PD V +LL
Sbjct: 240 DGFNGGIAAALDRGLCLKEALKWGTIVGALTTTKEGAQTALPDLDVVHSLL 290
>gi|271967463|ref|YP_003341659.1| ribokinase [Streptosporangium roseum DSM 43021]
gi|270510638|gb|ACZ88916.1| ribokinase [Streptosporangium roseum DSM 43021]
Length = 299
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 162/299 (54%), Gaps = 12/299 (4%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V GSAN D+ ++ P +GETV + +T+ GGKGANQA A+ F+G VG+DA
Sbjct: 4 VFGSANMDLVAYVEAAPGLGETVTGREFRTIPGGKGANQAIAAARAGAEVVFLGAVGDDA 63
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
G + L+G GV + + V P+G A +++ G NSII+V G N +
Sbjct: 64 FGPELRRTLAGAGVDVSGLRTVPG---PSGIAQIVVDGQGGNSIIVVPGANGAVTAPT-- 118
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
+ +LEV+ ++ ++LLQ E+P A+AAR+AG VI + P+P ELL+ +DIL
Sbjct: 119 EAELEVIARSDVLLLQLELPIEAVTAAARAARAAGTTVILTPAPVQ-PLPDELLDAVDIL 177
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSII 311
NE E +TG+ E + + V V++ LG++G+ G P +
Sbjct: 178 VANEHEAAAITGLAG------HEDAARELRTRVGWVIITLGSRGALTAAPGAGPAVRVRA 231
Query: 312 PAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
P R +DTT AGDTF + A VE +S + +RFA AAA+L VQ +GA SMP R +
Sbjct: 232 PEVRAVDTTAAGDTFVGALAAAHVERQSPDRAVRFAGAAAALSVQREGASTSMPSRAEI 290
>gi|294621356|ref|ZP_06700530.1| ribokinase [Enterococcus faecium U0317]
gi|291599067|gb|EFF30110.1| ribokinase [Enterococcus faecium U0317]
Length = 310
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 9 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 68
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 69 DSEGQQLLDLLTKENI--DTSGIAEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 125
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 126 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 185
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 186 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EHG 241
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 242 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 301
Query: 367 RKSV 370
R+++
Sbjct: 302 REAL 305
>gi|126656184|ref|ZP_01727568.1| Ribokinase [Cyanothece sp. CCY0110]
gi|126622464|gb|EAZ93170.1| Ribokinase [Cyanothece sp. CCY0110]
Length = 305
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 160/309 (51%), Gaps = 13/309 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ + P+ GET+ TL GGKGANQA AKL TYFVG+VG
Sbjct: 3 IVVFGSINMDMIAQTPCFPQPGETITGTHFITLPGGKGANQAVATAKLGRSTYFVGRVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + L + + V+ D +G A++ +++ G+NSII++ G N +
Sbjct: 63 DSLGRDLLKRLETFDI--NTQGVLIDKNTSSGVAMITVETSGENSIIVISGANGN----- 115
Query: 190 FGDEDL----EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ D+ +++ KA ++LLQ EIP A A+ GV V+ D +P L
Sbjct: 116 INESDVIRLEKILLKASLLLLQLEIPLKAVEIAAIEAKKLGVTVMLDPAPAPEKLPDSLY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PN++E +L G P E I +A + + GV+ V++KLG KG+ E E+
Sbjct: 176 PLIDIITPNQTEAAKLVGFPLSDTETIKKAAEQLLQKGVKIVIIKLGQKGAFYATENEEG 235
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ IDT GAGD F A G S +E L++ + +L +GA ++P
Sbjct: 236 FVAPTV--VETIDTVGAGDGFNGGVAAALDRGLSLKEALKWGSVVGALTTTQEGAQTALP 293
Query: 366 DRKSVLNLL 374
D ++V L+
Sbjct: 294 DLETVEQLI 302
>gi|379794759|ref|YP_005324757.1| putative ribokinase [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356871749|emb|CCE58088.1| putative ribokinase [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 305
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 16/309 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQNSI + GG NM+ P
Sbjct: 65 NDGVADFILEDFKEANIDTSY--IIKTDEAKTGQAFITVNAEGQNSIYVYGGANMTITP- 121
Query: 189 KFGDEDLEVVK----KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
ED+E K KA ++ Q E+P I + A++ GV + + P+P +L
Sbjct: 122 ----EDVETAKDAIVKADFIVAQLEVPIPAIIAAFEIAKAHGVTTVLNPAPA-KPLPDKL 176
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ IDI+ PNE+E L+G+ + +G++ VL+ LG +G+
Sbjct: 177 LSLIDIIVPNETEAELLSGIKVTDESSMQANADYFLSLGIKTVLITLGKQGTYFATRDHS 236
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPS 363
Q+ + IDTT AGDTF +F + + EE + F A+S VQ G+ S
Sbjct: 237 QHIQAY--KVKAIDTTAAGDTFIGAFVSRLNKSQDNLEEAIDFGNKASSFTVQRHGSQAS 294
Query: 364 MPDRKSVLN 372
+P + V N
Sbjct: 295 IPPLEEVEN 303
>gi|406661652|ref|ZP_11069767.1| Ribokinase [Cecembia lonarensis LW9]
gi|405554496|gb|EKB49580.1| Ribokinase [Cecembia lonarensis LW9]
Length = 305
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 153/305 (50%), Gaps = 10/305 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P ++V+GSAN D+ ++ D P GET+ + GGKGANQA A+L F+ ++
Sbjct: 5 PKILVIGSANMDMVIQSDHFPAPGETIIGGEFSLIPGGKGANQAVAAARLGGEVCFISKL 64
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+D G+ G+ ++ + + +P+G A++ + G+N+II+ G N P
Sbjct: 65 GQDIFGQQNLFNYQNEGIDCQFIGQIPE--IPSGVALITVDKYGENTIIVAPGANHQLLP 122
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ D+ + A ++LLQ EIP + + G +I + P+ ELL+
Sbjct: 123 DDL-DKGRRAFEAADMILLQLEIPMETVLATVNLGSALGKRIILNPAPA-GPLSDELLSK 180
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+ ++SPNE+E LTG+ +A + GVQ V++ +GA G+ L
Sbjct: 181 LFLISPNETEAEFLTGVKVHDEASAKKAAQYFLQKGVQHVIITMGASGAYLHTNN----F 236
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ ++P +V ID+T AGDTF + V EGK ++FA AA+L VQ GA S+P
Sbjct: 237 EGVLPTDKVTAIDSTAAGDTFNGALTVALGEGKDLVYAVKFALKAATLSVQRMGAQTSIP 296
Query: 366 DRKSV 370
+
Sbjct: 297 HMHEI 301
>gi|167622522|ref|YP_001672816.1| ribokinase [Shewanella halifaxensis HAW-EB4]
gi|167352544|gb|ABZ75157.1| ribokinase [Shewanella halifaxensis HAW-EB4]
Length = 305
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 161/308 (52%), Gaps = 12/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L+V+GS N D +++ P+ GET+ Q + GGKGANQA A+L T F+ VG+
Sbjct: 4 LIVLGSVNADHVLQVASFPRPGETLHGYNYQIIPGGKGANQAVAAARLGADTGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I G+ + +++V++ PTG A++ + G+NSI I N K
Sbjct: 64 DGFGRNIRHTFEQDGMEVSAVHMVEN--TPTGIAMIQVADSGENSICIAAAAN-DALTTK 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
++ +++A +L+Q E P A A++ G VI + AP +P LL
Sbjct: 121 VVEQHALKIEQAQYLLMQLETPLPGIELAASIAKAQGTQVILNP----APARSLPDTLLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E LTG+ + ++A H G+ V++ LG+KG L +GE I
Sbjct: 177 MVDIITPNETEAELLTGVAITDADSAAQAAKVLHDKGIVTVMITLGSKGVYLSEQGEGKI 236
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+V DTT AGDTF +F +EG++ ++ + FA AAA++ V GA S+P
Sbjct: 237 IAGF--KVQVTDTTAAGDTFNGAFVTALLEGQTIDKAIVFAHAAAAISVTRFGAQTSIPT 294
Query: 367 RKSVLNLL 374
R+ V L
Sbjct: 295 REEVEQFL 302
>gi|389572294|ref|ZP_10162379.1| ribokinase [Bacillus sp. M 2-6]
gi|388427875|gb|EIL85675.1| ribokinase [Bacillus sp. M 2-6]
Length = 281
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 155/300 (51%), Gaps = 26/300 (8%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V ++ P GETV ++ +T+ GGKGANQA A+L Y +G+VG+DA G+ I
Sbjct: 1 MDLVVTSNKRPSAGETVLGESFKTVPGGKGANQAVASARLGADVYMIGRVGDDAYGQDIM 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
L GVR YM V + T H ++ ++G NSI++V G N P D L
Sbjct: 61 SNLQAQGVRTTYMKPVTEMESGTAHIIL---AEGDNSIVVVKGANNEVTPHYVKDA-LSS 116
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFIDILSPN 254
++ GIVL+Q+EIP+ V G+PVI + AP + Q++L+ ++PN
Sbjct: 117 LEDIGIVLIQQEIPEETIEAVCAICSEKGIPVILNP----APARKVSQQILDQAAYITPN 172
Query: 255 ESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPA- 313
E E + T I+EA+ + ++L+ G G F +G K + ++P
Sbjct: 173 EHEAALMFDGLT-----IAEAL----RQYPNKLLITEGKNGVRYF-DGSKEV---LVPGY 219
Query: 314 -ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLN 372
+ +DTTGAGDTF + AV EGKS + L FA AAS+ V GA MP R+ + N
Sbjct: 220 PVKAVDTTGAGDTFNGALAVALTEGKSLFDALAFANLAASISVTKFGAQGGMPAREELEN 279
>gi|302380989|ref|ZP_07269450.1| putative ribokinase [Finegoldia magna ACS-171-V-Col3]
gi|302311210|gb|EFK93230.1| putative ribokinase [Finegoldia magna ACS-171-V-Col3]
Length = 292
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 155/301 (51%), Gaps = 22/301 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D ++ PK GET+++ + GGKGANQA KL F+ VG
Sbjct: 3 ILVIGSVNVDTTYNLENFPKPGETISSLSKSRSVGGKGANQAIACQKLGGDVKFLACVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + I + GV D N++K V TG A++ + GQN I++ G N + +
Sbjct: 63 DMDADFIFKNMREYGV--DTSNIIK-KNVDTGTALINVDKTGQNQIVLDHGANYAISIQD 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
D+++E++ + I++LQ EIP VN K A+ GV VI + P P E +
Sbjct: 120 I-DDNIELLDECDILILQMEIPQEVNEYAIKKAKEKGVFVILN------PAPSEFEVENI 172
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ +D+ PNE+E+ R + S + + EA + V V++ LG GS F + E
Sbjct: 173 LDKVDLFVPNENEILRYS-----SKKNLKEAAAELLDKNVGSVIITLGENGSEYFTKAEH 227
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IKQ I A +DTT AGD++ + AV + KS +E + FA +S V KG+ S+
Sbjct: 228 -IKQEAIK-ADAVDTTSAGDSYIGAMAVMLDQKKSIKEAMEFATKVSSKTVTRKGSGESI 285
Query: 365 P 365
P
Sbjct: 286 P 286
>gi|410100480|ref|ZP_11295440.1| ribokinase [Parabacteroides goldsteinii CL02T12C30]
gi|409215515|gb|EKN08514.1| ribokinase [Parabacteroides goldsteinii CL02T12C30]
Length = 309
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ ++ LP+ GET+ T GGKGANQA A+L F+ + G
Sbjct: 11 ILVVGSSNTDMVIKAGHLPRPGETILGGTFFMNPGGKGANQAVTIARLGASVTFICKTGS 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y + D P+G A++ + +N I++ G N + P
Sbjct: 71 DIFGHQSQQLFEEEGINTSY--IFSDSEYPSGVALITVDEQAENCIVVASGANANLLPSD 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ E V A IVL+Q EIP VA+ A VI + P+ LL +
Sbjct: 129 LAKAE-EAVDLADIVLMQLEIPMETVEYVAEIAYYKNKKVILNPAPAQ-PLSPSLLKHLY 186
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKPIKQ 308
+++PNE+E ++G+ E +A +MGVQ V++ LG+KG+ ++ EG +
Sbjct: 187 MITPNETEAEMISGVKITGQESAVKAARVLSEMGVQNVIITLGSKGALVYCDEGVE---- 242
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
IPA +V +DTT AGD F + AV EG+++ E +RFA A+++ V GA S+P
Sbjct: 243 -FIPAFKVEAVDTTAAGDVFNGALAVALSEGRNQIEAVRFACKASAISVTRVGAQSSVPY 301
Query: 367 RKSV 370
R V
Sbjct: 302 RSEV 305
>gi|295703058|ref|YP_003596133.1| ribokinase [Bacillus megaterium DSM 319]
gi|294800717|gb|ADF37783.1| ribokinase [Bacillus megaterium DSM 319]
Length = 292
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 22/304 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + P GETV ++ +T+ GGKGANQA A+L +G VGE
Sbjct: 4 VTVIGSSSMDLVVTSNIRPGAGETVLGESFKTVPGGKGANQAVAAARLGADVSMIGCVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I + GV ++ + V D T H ++ ++G NSI++V G N P+
Sbjct: 64 DHYGKAILENFKSNGVSVNNVKPVTDLDSGTAHIIL---AEGDNSIVVVKGANDYITPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ E +K+A IVL+Q+EIP+ VA+ + VP++ + P+ E++ +
Sbjct: 120 YVEKAKEKIKEADIVLIQQEIPEETVEYVAQLCQELKVPLLLNPAPAR-PLKAEVIEQVS 178
Query: 250 ILSPNESELGRLTGMPTDSYE-QISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE E L +E + E V+K + ++ + G +G F GEK +
Sbjct: 179 YITPNEHEAELL-------FEGKEKEEVLKQYP---NKLFITEGKQGVRYF-NGEKEV-- 225
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++P+ +V IDTTGAGDTF A+ AV EG E+ ++FA AASL V GA MP
Sbjct: 226 -LVPSYQVETIDTTGAGDTFNAALAVALAEGMGFEKGIQFANRAASLSVTKFGAQGGMPT 284
Query: 367 RKSV 370
RK V
Sbjct: 285 RKEV 288
>gi|308510368|ref|XP_003117367.1| hypothetical protein CRE_02120 [Caenorhabditis remanei]
gi|308242281|gb|EFO86233.1| hypothetical protein CRE_02120 [Caenorhabditis remanei]
Length = 314
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 3/294 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS D+ DR P+ GE+V ++ +GGKGANQA A+L +G VGE
Sbjct: 8 IVVFGSIVQDLVSYTDRFPRPGESVRGNVFKSGSGGKGANQAVAAARLGANVALIGMVGE 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G L+ GV D V K T A + + + +NSI++ G N+ PE
Sbjct: 68 DMFGDTNIKDLTQNGV--DTSCVGKTNKTHTATATITVNKEAENSIVVTLGANLELSPE- 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + + + +V+ Q EI + N + + AR GV + DA + + +L +D
Sbjct: 125 VADANSSTISNSKMVMCQGEIDEKGNRRAFEIARKHGVTTFLNPAPGDAKMDKTILELVD 184
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ NE+E +TG+P ++ + +A +MG Q ++ LGAKG L +G+ I+
Sbjct: 185 VICTNENEAEFITGIPQNNVDDAKKAARAMVEMGPQHAIITLGAKGVLLASKGKDDIEHM 244
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ IDTTGAGD F + A V G S +R AA A+L V G S
Sbjct: 245 SVDKVEAIDTTGAGDCFCGTLAAHLVAGHSMTSSIRSAANIAALSVTRHGTQSS 298
>gi|373857709|ref|ZP_09600449.1| ribokinase [Bacillus sp. 1NLA3E]
gi|372452380|gb|EHP25851.1| ribokinase [Bacillus sp. 1NLA3E]
Length = 306
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 157/312 (50%), Gaps = 16/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ ID++PK GET+ A + GGKGANQA AK+ V +VG+
Sbjct: 3 IAVIGSNMVDLISYIDKMPKEGETLEAPDFEIGCGGKGANQAVAAAKMGSKVMMVTKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D L G+ ++ N V G +G A + + + +N I+I+ G N P
Sbjct: 63 DLFADNTIQNLESYGIDTEFTNKVL--GTSSGVAPIFVDPESKNRILIIKGANQQLLPVD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL-LNFI 248
D + +K+ +++LQ EIP + + G+PVI + AP + L +++
Sbjct: 121 V-DRAADKLKQCSLIVLQLEIPLETIYRAIEFGNEHGIPVILNP----APASKNLDFSYV 175
Query: 249 ---DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D PNESEL LTGMP ++ EQI A + GV+ V+V +G++G +GE
Sbjct: 176 CKCDFFIPNESELEILTGMPVETDEQIKAAASTLIEKGVKDVIVTMGSRGVMWVTKGEVH 235
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG---AIP 362
I S AA IDTTGAGD F FA FV+ ++ A A A+L V +G + P
Sbjct: 236 IVDSHTVAA--IDTTGAGDAFIGCFAHYFVQDGDVLHAIKMATAFAALSVTKRGTQTSYP 293
Query: 363 SMPDRKSVLNLL 374
S + + +N++
Sbjct: 294 SFDEVEQFMNVM 305
>gi|160891615|ref|ZP_02072618.1| hypothetical protein BACUNI_04068 [Bacteroides uniformis ATCC 8492]
gi|317478307|ref|ZP_07937471.1| ribokinase [Bacteroides sp. 4_1_36]
gi|156859022|gb|EDO52453.1| ribokinase [Bacteroides uniformis ATCC 8492]
gi|316905466|gb|EFV27256.1| ribokinase [Bacteroides sp. 4_1_36]
Length = 318
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 159/310 (51%), Gaps = 15/310 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ + LP+ GET+ GGKGANQA A+ F+ +G+
Sbjct: 16 IVVVGSTNVDLIARVSHLPEPGETIGDAEYCLSYGGKGANQAIAAARSGGHVSFISCLGD 75
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA + + G+ +DY+ K TG A + + +G+N I + G N E+
Sbjct: 76 DAYADTLITSFVDSGIDVDYIQ--KCVRHSTGIAFIFVAENGENCIAVAPGANNLLRGER 133
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D L V+K+A ++LQ EIP I + + A + +I + AP IP +L
Sbjct: 134 M-DTILPVIKEADALVLQLEIPYESVISLIEYAHTVDTKIILNP----APAKQIPSYILE 188
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV-EGEKP 305
+DIL NE+E + G D E I A ++G Q V++ LG KGS + E EK
Sbjct: 189 KVDILILNETEAMLIAGQSLDFSEPIGIARSLLRRVG-QVVILTLGEKGSVIVSDEMEKQ 247
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
I ++ +DTTGAGDTF +F +VEG ++C++FA AAA+L V GA S+P
Sbjct: 248 IPSYVV---NTVDTTGAGDTFCGAFVAQWVEGVDLQDCVQFATAAAALSVTRIGAQVSIP 304
Query: 366 DRKSVLNLLQ 375
+K V+ ++
Sbjct: 305 YQKEVIEFMR 314
>gi|443312867|ref|ZP_21042481.1| ribokinase [Synechocystis sp. PCC 7509]
gi|442777017|gb|ELR87296.1| ribokinase [Synechocystis sp. PCC 7509]
Length = 316
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 155/311 (49%), Gaps = 11/311 (3%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + GS N D+ + +LP GET+ TL GGKGANQA A+L TY VG+V
Sbjct: 5 PCAIAFGSINMDLVAKTPKLPVPGETLLGHEFFTLPGGKGANQAVAMARLGIDTYMVGRV 64
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D+ G + + L GV + NV D + +G A++ + G+N II++ G N
Sbjct: 65 GNDSFGNQLLETLQSVGVNTE--NVFIDENISSGVALISVDDAGENQIIVIPGANGRV-- 120
Query: 188 EKFGDEDL-EVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
+ E+L ++ ++L+Q E+P + A+AA+ GV VI D + IP EL
Sbjct: 121 DSIDVENLISLLPNCRVLLMQFEVPLPTILLAAQAAKRLGVKVILDPAPVLKDIPAELYP 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PN++E+G L G P E ++A + GV + KLG KG + E
Sbjct: 181 LVDIITPNQTEIGSLVGFPVIDIESATKATHILLQRGVGCAIAKLGVKGVICTTKEET-- 238
Query: 307 KQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+PA +DT AGD F A VEG + + + AAA ++ G SM
Sbjct: 239 --FFVPAFPVETVDTVAAGDAFNGGLAAAIVEGLPLRQAVVWGAAAGAIASTTSGTQSSM 296
Query: 365 PDRKSVLNLLQ 375
P + +++ LQ
Sbjct: 297 PTKDVLIDFLQ 307
>gi|323499254|ref|ZP_08104231.1| ribokinase [Vibrio sinaloensis DSM 21326]
gi|323315642|gb|EGA68676.1| ribokinase [Vibrio sinaloensis DSM 21326]
Length = 307
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/304 (34%), Positives = 155/304 (50%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ T F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADTGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G I + + D V PTG A++ + G+NSI I N +
Sbjct: 64 DAFGINIRENFKLDNI--DIAGVKMQPNCPTGIAMIQVADSGENSICISAEANAKLTADA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ DLE +++A +L+Q E P + A+ A+ A VI + AP +P LL
Sbjct: 122 I-ESDLERIRQAKYLLMQLETPMCGIEKAAQVAKEAKTNVILNP----APARELPDSLLA 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E LTG+ E EA H+ G++ V++ LGAKG L G +
Sbjct: 177 CVDVITPNETEAELLTGIVVSDNESAQEAANVLHRKGIEIVMITLGAKGVWLSQNGRGEL 236
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ DTT AGDTF + G +E E ++FA AAA++ V GA S+P
Sbjct: 237 IEGF--KVDATDTTAAGDTFNGALVTGLLEDLPLESAIKFAHAAAAISVTRFGAQTSIPT 294
Query: 367 RKSV 370
R+ V
Sbjct: 295 REEV 298
>gi|186683016|ref|YP_001866212.1| ribokinase [Nostoc punctiforme PCC 73102]
gi|186465468|gb|ACC81269.1| ribokinase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 155/302 (51%), Gaps = 13/302 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ RLP GET+ + ++GGKGANQA AKL PT VG+VG
Sbjct: 3 IIVFGSINIDLVATTPRLPVPGETLLGEEFFKVSGGKGANQAVALAKLGIPTQMVGRVGA 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + + L GV++D N+ D V +G A++ + G+N II++ G N +
Sbjct: 63 DDFGVELVNNLQSSGVQID--NIFVDETVSSGVAIIAVNHAGENQIIVIPGAN-----GR 115
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
ED+E ++ +A +LLQ EIP + I A AAR + + VI D + P EL
Sbjct: 116 VNQEDVERLSQLLPEATALLLQLEIPITTVIAAATAARKSKIRVILDPAPAQSNFPDELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+DI++PNE E +L G P D EQ ++A + GV+ +VKLGAKG E+
Sbjct: 176 PLVDIITPNEVEAAQLVGFPVDGEEQAAKAAEVLLQRGVKCAIVKLGAKG-VFCATAEEK 234
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ P +DT AGD F G S + + + AAA +L GA S+P
Sbjct: 235 FFVPVFP-VHAVDTVAAGDAFNGGLTAALFAGFSLHQAVVWGAAAGALATTKSGAQTSLP 293
Query: 366 DR 367
DR
Sbjct: 294 DR 295
>gi|430852952|ref|ZP_19470682.1| ribokinase [Enterococcus faecium E1258]
gi|430540774|gb|ELA80951.1| ribokinase [Enterococcus faecium E1258]
Length = 305
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 160/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + + ++D TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENIDTSGIAEIQDA--TTGQAMIMVDAVGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +Q
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EQG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|261823353|ref|YP_003261459.1| ribokinase [Pectobacterium wasabiae WPP163]
gi|261607366|gb|ACX89852.1| ribokinase [Pectobacterium wasabiae WPP163]
gi|385873819|gb|AFI92339.1| Ribokinase [Pectobacterium sp. SCC3193]
Length = 403
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 176/342 (51%), Gaps = 17/342 (4%)
Query: 38 TNRQFPAHVIKCQCQRRDQNPVPK-NPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAA 96
+ F + + + Q R Q K N +N + ++GS N DI ++ R PK GE++ A
Sbjct: 71 SGENFEVLLKRLEKQNRHQTSKQKGNSMN--GKVCILGSFNVDIVAKVMRFPKGGESIMA 128
Query: 97 KTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDG 156
+ S GGKGANQA ++ YF+ +VG D + D + + + +
Sbjct: 129 QGSAIGPGGKGANQAMAASRAGAQVYFIAKVGTDQFSQFAYDHFTASDIH--SFKLYQSD 186
Query: 157 GVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVN 215
PTG+A++ + Q +G+N I I G N + ++ E+ + ++L+Q E S
Sbjct: 187 SEPTGNAIIYVSQQNGENMIAIHPGANQTITDDEVAAIASELT-TSDVLLVQLENNFSAT 245
Query: 216 IQVAKAARSAGVPVIFDAGGMDAPIPQEL---LNFIDILSPNESELGRLTGMPTDSYEQI 272
+ K A + G VI + AP E+ L+++D+++PNE+E L+G+ +
Sbjct: 246 LNAIKLAHTLGKKVILNP----APYSSEILPYLDYLDVITPNETEASLLSGIDIHDVDDA 301
Query: 273 SEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAV 332
EA +K +G ++V++ +G++G AL ++G++ PA V DTTGAGD F +FA
Sbjct: 302 KEAALKIAALGAKRVIITMGSRG-ALLLDGKQFQHIPAFPALGV-DTTGAGDAFNGAFAA 359
Query: 333 GFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
G+S + +A+A ASL V+ +GA +MP+ + V+ L
Sbjct: 360 ALANGQSLVQAATYASAFASLAVEREGA-SNMPEHQQVIARL 400
>gi|413962658|ref|ZP_11401885.1| ribokinase [Burkholderia sp. SJ98]
gi|413928490|gb|EKS67778.1| ribokinase [Burkholderia sp. SJ98]
Length = 310
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 8/304 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ RLP+ GET+A + GGKG+NQA A+L +G VG+
Sbjct: 10 VTVVGSLNMDLVARAPRLPRPGETLAGHAFAQMPGGKGSNQAVAAARLGAHVAMIGCVGD 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG + +L G+ D + PTG A++++ QN+I+IV G+N P +
Sbjct: 70 DTNGATLRGSLEAEGI--DCTALATSASTPTGVALIVVDDASQNAIVIVAGSNAEVTPAR 127
Query: 190 FGDEDLEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
++ ++ +A +++ Q E PD+V +A A R I + +P + I
Sbjct: 128 IEAQE-ALIARADVIVCQLETPPDAVRAALA-AGRRLKRTTILNPAPAARKLPPDWFPLI 185
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L PNE E L+G+ ++ + A G + V+V LGA+G ++G +
Sbjct: 186 DYLIPNELEAATLSGVAIETPDDARRAAQALKAKGARNVIVTLGAQGVLALLDGADD-EG 244
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+P+ RV +DTT AGDTF F+ G + + + F AA++ V +GA PS+P
Sbjct: 245 VHLPSPRVEAVDTTAAGDTFIGGFSAELARGAAAIDAIAFGQRAAAIAVTREGAQPSIPH 304
Query: 367 RKSV 370
R +
Sbjct: 305 RSEI 308
>gi|269102919|ref|ZP_06155616.1| ribokinase [Photobacterium damselae subsp. damselae CIP 102761]
gi|268162817|gb|EEZ41313.1| ribokinase [Photobacterium damselae subsp. damselae CIP 102761]
Length = 406
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 158/306 (51%), Gaps = 12/306 (3%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFV 124
NT + V+GS N DI E+D LPK+G+T A ++ GGKGANQA+ A L +
Sbjct: 96 NTETDVYVLGSFNIDIVTEVDNLPKIGQTQRATSTHFYPGGKGANQASAAATLCDKVHLT 155
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSD-GQNSIIIVGGTNM 183
+VG+D + LS + + +++D TG A+V++ S G N I I G N
Sbjct: 156 IKVGQDEFSEKAKSYLSSTNIT--SLTLLEDSQPHTGSAIVLVSSQTGNNMITIDLGANE 213
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ E+ +D++++++A + L Q E + A S+ VI D + Q
Sbjct: 214 TIKTEEIL-QDIDLIREAKVFLTQLENNFDATRFAIEQAYSSQTLVILDPAPYREEVKQ- 271
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+L FIDI++PNE E ++G+ +A ++ GV V++ + KGS L+
Sbjct: 272 ILPFIDIITPNEIEAEEISGIKITDISTAKDAAKAIYQQGVNHVIITMAEKGSILY---- 327
Query: 304 KPIKQSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ PA + VIDT+GAGD FT S A +G + ++ + +A A +SL ++ KGA
Sbjct: 328 NHLGFHYTPAYKSAVIDTSGAGDAFTGSLAAYLAKGVNLKQAINYATAFSSLKIEKKGA- 386
Query: 362 PSMPDR 367
+MPD+
Sbjct: 387 SNMPDK 392
>gi|329850023|ref|ZP_08264869.1| ribokinase [Asticcacaulis biprosthecum C19]
gi|328841934|gb|EGF91504.1| ribokinase [Asticcacaulis biprosthecum C19]
Length = 304
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 149/293 (50%), Gaps = 10/293 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+++++ LPK ET+ K + GGKG NQA A+L T+ + VG+
Sbjct: 3 IVVAGSINVDVFLDVTALPKPNETIIGKAMRQAIGGKGLNQAVACARLGATTHMIAAVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA T L+ GV +D++ + G TG A +++ DGQN I++ G N +
Sbjct: 63 DALAPQATGFLTANGVLIDHVKAL--AGATTGLANILVAEDGQNMIVVTPGANGLLSRDD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + A +++Q E+P + AR+ GV + + +D P L+ D
Sbjct: 121 IDAAD-SSIATASALIVQLEVPIPTVRHALERARAHGVMTVLNPAPVD-PAAMALMPLAD 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+++PNE+EL +LTG+P S + + G +Q LV LG++G A + G
Sbjct: 179 LVTPNETELMKLTGIPDLSDASLIAGLNALMVAGAKQALVTLGSEGCAALIAG----NLV 234
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
+PA RV +D TGAGD F + V G LR+A+AA++L V V A
Sbjct: 235 RLPAFRVKAVDATGAGDIFNGALVTRLVAGDDPVTALRYASAASALSVTVPSA 287
>gi|407478058|ref|YP_006791935.1| ribokinase [Exiguobacterium antarcticum B7]
gi|407062137|gb|AFS71327.1| Ribokinase [Exiguobacterium antarcticum B7]
Length = 292
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 154/302 (50%), Gaps = 22/302 (7%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
VVGS + D+ VE DR P GETV T+ GGKGANQA A+L VG +G+DA
Sbjct: 6 VVGSISMDLVVESDRRPSAGETVIGSAFHTVPGGKGANQAVAIARLGGNVEMVGCIGDDA 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG I V ++ + + T H + ++G NSI++V N++ ++
Sbjct: 66 NGDAIRQNFETAQVGTTHLQTIANERTGTAHITL---AEGDNSIVVVQSANLAVVYDEAQ 122
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ L + + ++LLQ EIP QVA+ ++ G+PV+ + AP + ELL +
Sbjct: 123 LDSL--LGQTDMILLQLEIPLETVKQVARYGKAHGIPVVLNP----APAIVLDDELLADV 176
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
L+PNE E G + G +S+ K ++V G++G A F +G+ +
Sbjct: 177 TYLTPNEHECGLIFGQQQSLEHWLSQYPNK--------LIVTEGSRG-ARFYDGQDIVTV 227
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
I A V+DTTGAGDTF + AV EG+ E +RFA AA + V+ GA MP R+
Sbjct: 228 PAI-ATTVVDTTGAGDTFNGALAVALTEGRPLTEAIRFANQAAGISVRALGAQGGMPTRE 286
Query: 369 SV 370
+
Sbjct: 287 QM 288
>gi|425022325|ref|ZP_18432513.1| ribokinase [Enterococcus faecium C497]
gi|403003252|gb|EJY17156.1| ribokinase [Enterococcus faecium C497]
Length = 305
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 158/304 (51%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALGSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|402817126|ref|ZP_10866715.1| ribokinase RbsK [Paenibacillus alvei DSM 29]
gi|402505232|gb|EJW15758.1| ribokinase RbsK [Paenibacillus alvei DSM 29]
Length = 292
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS++ D+ V + P GETV ++ +T+ GGKGANQA A+L +G+VG+
Sbjct: 4 IIVVGSSSIDLVVTSSKRPGAGETVLGESFKTVPGGKGANQAVAAARLGADVTMIGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA + I + V +DY+ V T H V+ ++G NSI++V N P+
Sbjct: 64 DAFAEQILNNFKQNKVCIDYVEPVTHMESGTAHIVL---AEGDNSIVVVKAANNEVTPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ D + K A +V++Q+EIP V++ + G+P++ + P+ E++
Sbjct: 120 YIDHSMRAFKDADMVMIQQEIPVESVTYVSRICKKLGIPLLLNPAPAR-PLDNEVIENAA 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE E L S ISEA+ K ++ + G+KG F +G +
Sbjct: 179 YITPNEHEAKILF-----SSLSISEALRKYP----NKLFITEGSKGVRYF-DGSNEV--- 225
Query: 310 IIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++P+ + V+DTTGAGDTF A+FAV EG + + +RFA AASL V GA MP R
Sbjct: 226 LVPSYKVEVVDTTGAGDTFNAAFAVALAEGTAIYDSVRFANRAASLSVTKFGAQGGMPYR 285
Query: 368 KSV 370
+ V
Sbjct: 286 QEV 288
>gi|374673725|dbj|BAL51616.1| ribokinase [Lactococcus lactis subsp. lactis IO-1]
Length = 314
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 159/309 (51%), Gaps = 36/309 (11%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS-HPTYFVGQVGED 130
V+GS + D+ +R+P GETV + + GGKGANQA A+LS + +G VG+D
Sbjct: 20 VIGSISMDLVTRTNRVPNAGETVFGEDFAMVPGGKGANQAVAFARLSPNEVSMIGAVGKD 79
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVP--TGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
A G+ I V + NV G VP TG A + L D N III+ G N P
Sbjct: 80 AFGESILQNFKENAVLFE--NV---GTVPQTTGIAQITLYDD-DNRIIIIPGANNEVLPS 133
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ-----E 243
D E VK++ +V+LQ EIP N+ +AK + + V+++ P P E
Sbjct: 134 YLADL-WEKVKESQLVILQNEIPHETNLAIAKFCKENAIKVLYN------PAPARKTDLE 186
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+++F+D ++PNE E L P + E+I K +++V LG++G +F +GE
Sbjct: 187 MIDFVDYITPNEHECKEL--FPNLALEEIL-------KKYSNRLIVTLGSEG-VIFHDGE 236
Query: 304 KPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
K IPA A+V+DTTGAGDTF +FA G E S + +R A A+ L +Q GA
Sbjct: 237 TLQK---IPAIKAKVVDTTGAGDTFNGAFAFGLTENLSISDSIRLAVVASHLSIQKFGAQ 293
Query: 362 PSMPDRKSV 370
MP V
Sbjct: 294 GGMPKLSEV 302
>gi|116617803|ref|YP_818174.1| ribokinase family sugar kinase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|339498316|ref|ZP_08659292.1| ribokinase family sugar kinase [Leuconostoc pseudomesenteroides
KCTC 3652]
gi|116096650|gb|ABJ61801.1| Sugar kinase, ribokinase family [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 303
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 11/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P VGET+A T GGKGANQA ++ F+G VG
Sbjct: 5 IVVLGSLNVDNIMKMPRMPLVGETMALTEVTTAPGGKGANQAVAASRQGANVSFIGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DANG+ + L GV +D ++ D VPTG A +MLQ G N+I+I GG N + E
Sbjct: 65 DANGQFMRATLLTNGVNVDAVSTNSD--VPTGSAYIMLQESGANTILIHGGANQALTIE- 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + ++ +A +++ Q E+P V + K A+ V I + + EL+ D
Sbjct: 122 --DINTALIAQADVLIAQFEVPFEVILAAFKIAKKNNVQTILNPAPAVYELTPELMAVTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKC-HKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
I+ PNE+E LTG+ + E + V GVQ+ ++ LG GS +G+K +
Sbjct: 180 IVLPNETEAQLLTGINVINDEGVLNRVSDALQAKGVQRSIITLGEAGS-FIADGQK--RW 236
Query: 309 SIIPA-ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
+ P DTT AGDTF + A S ++ ++ A A+++ V GAIPS+P
Sbjct: 237 WVQPEKVDAQDTTAAGDTFIGTLASVIAPDFSNLDDAVQRANIASAIAVTRPGAIPSIPT 296
Query: 367 RKSVLN 372
K V N
Sbjct: 297 DKEVDN 302
>gi|421079888|ref|ZP_15540824.1| Putative ribokinase [Pectobacterium wasabiae CFBP 3304]
gi|401705375|gb|EJS95562.1| Putative ribokinase [Pectobacterium wasabiae CFBP 3304]
Length = 403
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 175/338 (51%), Gaps = 17/338 (5%)
Query: 42 FPAHVIKCQCQRRDQNPVPK-NPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQ 100
F + + + Q R Q K N +N + ++GS N DI ++ R PK GE++ A+ S
Sbjct: 75 FEVLLKRLEKQNRHQTSKQKGNSMN--GKVCILGSFNVDIVAKVMRFPKGGESIMAQGSA 132
Query: 101 TLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPT 160
GGKGANQA ++ YF+ +VG D + D + + + + PT
Sbjct: 133 IGPGGKGANQAMAASRAGAQVYFIAKVGTDQFSQFAYDHFTASDIH--SFKLYQSDSEPT 190
Query: 161 GHAVVML-QSDGQNSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVA 219
G+A++ + Q +G+N I I G N + ++ E+ + ++L+Q E S +
Sbjct: 191 GNAIIYVSQQNGENMIAIHPGANQTITDDEVAAIASELT-TSDVLLVQLENNFSATLNAI 249
Query: 220 KAARSAGVPVIFDAGGMDAPIPQEL---LNFIDILSPNESELGRLTGMPTDSYEQISEAV 276
K A + G VI + AP E+ L+++D+++PNE+E L+G+ + EA
Sbjct: 250 KLAHTLGKKVILNP----APYSSEILPYLDYLDVITPNETEASLLSGIDIHDVDDAKEAA 305
Query: 277 VKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVE 336
+K +G ++V++ +G++G AL ++G++ PA IDTTGAGD F +FA
Sbjct: 306 LKIAALGAKRVIITMGSRG-ALLLDGKQFQHIPAFPALG-IDTTGAGDAFNGAFAAALAN 363
Query: 337 GKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLNLL 374
G++ + +A+A ASL V+ +GA +MP+ + V+ L
Sbjct: 364 GQNMAQAATYASAFASLAVEREGA-SNMPEHQQVIARL 400
>gi|227432209|ref|ZP_03914205.1| ribokinase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|227351982|gb|EEJ42212.1| ribokinase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
Length = 313
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 8/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D IDRLP GET+ + GGKGANQA A+ +G VG+
Sbjct: 5 VVVIGSLNIDTIQMIDRLPNQGETITVNNQASTFGGKGANQAVAAARQGADVTMIGAVGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ LS G+ DY+ TG A +ML+ DG N+I++ GG NM+
Sbjct: 65 DDRGRAFKQLLSDEGISTDYIFTKSQ---FTGSATIMLEPDGHNTIMVYGGANMNLTSAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ ++ A +++ Q E+P + A+ GV I + + + + +++ D
Sbjct: 122 V-EKARNIIANADVIVAQLEVPTEAIVAGFNIAKENGVLTILNPAPITSHLDSNIISSTD 180
Query: 250 ILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++ PNE+E L PT ++ K +K+G V+V LG+ G V G I
Sbjct: 181 LIIPNETEAAALAHTEPTTKQSSLTPLTSKLNKVGFSNVVVTLGSDGVYYNVNGSADI-- 238
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPDR 367
S + +DTT AGDTF +F+ + S +R + A+S+ V G I S+P++
Sbjct: 239 SPVFKVNAVDTTAAGDTFIGTFSANIDDNLSNLPSVIRRSCFASSIAVSQSGTIASIPNK 298
Query: 368 KSV 370
K V
Sbjct: 299 KDV 301
>gi|238783002|ref|ZP_04627029.1| Ribokinase [Yersinia bercovieri ATCC 43970]
gi|238716003|gb|EEQ07988.1| Ribokinase [Yersinia bercovieri ATCC 43970]
Length = 308
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 161/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV K + GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVIGKQYKVAFGGKGANQAVAAGRSGAKIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L+ + D + G TG A++ + +G+N I I G N + PE
Sbjct: 66 DDIGERVRRQLASDNI--DTAPIEAVAGTTTGVALIFVNGEGENVIGINAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V+ A +L+Q E P I AK A+ VI + AP +P ELL
Sbjct: 124 LSRYQQQVI-AADALLMQLESPLDTVIAAAKLAKQHQTQVILNP----APARELPDELLA 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + ++A H G+ V++ LG++G L +G
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAAKAAQILHDKGIATVIITLGSRGVWLSEQG---- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K ++ +V +DT AGDTF + +EG+S + +RFA AAA++ V GA PS+
Sbjct: 235 KGKLVAGFKVDAVDTIAAGDTFNGALLTALLEGQSMDLAVRFAHAAAAIAVTRSGAQPSI 294
Query: 365 PDRKSVLNLLQ 375
P R + + LQ
Sbjct: 295 PWRTEIDSFLQ 305
>gi|239986992|ref|ZP_04707656.1| putative ribokinase [Streptomyces roseosporus NRRL 11379]
gi|291443940|ref|ZP_06583330.1| ribokinase [Streptomyces roseosporus NRRL 15998]
gi|291346887|gb|EFE73791.1| ribokinase [Streptomyces roseosporus NRRL 15998]
Length = 296
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 162/301 (53%), Gaps = 13/301 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ R P GETV + +T+ GGKGANQA A+ +G VG+
Sbjct: 4 IAVLGSTNMDLVAYTARAPGRGETVTGREFRTIPGGKGANQAVAAARAGGEVMMIGAVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + + L GV D ++ + P+G A +++ G N+I++V G N
Sbjct: 64 DVYGTRLREGLEHAGVDTDLLHTAEG---PSGTAHIVVDDTGSNAIVVVPGANGVVT--T 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
G ++ + + I+L+Q E+P S ++ A+AAR+ GV I + P+P ELL+ ID
Sbjct: 119 LGPGEIAAIAASEILLMQLELPLSAVVEGARAARAQGVRTILTPAPVQ-PLPDELLDHID 177
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L PNE E L+G D ++ +++ V +V+V LGAKG G +P+
Sbjct: 178 LLVPNEHEAAELSGQ--DEPHAAAQILLRR----VPEVIVTLGAKGCLYAARGGEPVLFE 231
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P+ +DTTGAGDTF + AV EG+ E + FA+AAA+LCVQ GA SMP R
Sbjct: 232 A-PSVTAVDTTGAGDTFVGTLAVALGEGRPVAEAVAFASAAAALCVQKTGASTSMPYRSE 290
Query: 370 V 370
+
Sbjct: 291 I 291
>gi|312109358|ref|YP_003987674.1| ribokinase [Geobacillus sp. Y4.1MC1]
gi|311214459|gb|ADP73063.1| ribokinase [Geobacillus sp. Y4.1MC1]
Length = 298
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 159/313 (50%), Gaps = 26/313 (8%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVGS N D+ R P GET+ + + GGKGANQA A+L + +G
Sbjct: 2 TKPVITVVGSINMDLVTIASRFPSQGETILGEEFHLIPGGKGANQAVAAARLGAEVHMIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHA-VVMLQSDGQNSIIIVGGTNMS 184
VG D G + +L GV +D + V G TG A + +L+ D N II+V G N +
Sbjct: 62 AVGTDPFGNELLRSLEREGVHIDNVKPVTHKG--TGIASITILEQD--NRIIVVPGANHA 117
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
PE D E++ K+ + +LQ EIP SV + A+ V VI + P+PQ+L
Sbjct: 118 LRPEDI-DRYEEIIAKSDVCVLQLEIPLSVVERAVFLAKKHHVRVILNPAPAQ-PLPQKL 175
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
+ D L+PNE E + +EQ+ V +V+V GA+G + +G
Sbjct: 176 IEQADFLTPNEHEREII-------FEQVDVDVF------ADKVIVTEGARGVTIRKDG-- 220
Query: 305 PIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
KQ +IP+ V+DTTGAGDTF + AV +G S E+ RFA AAA+L V GA
Sbjct: 221 --KQVLIPSFCVPVVDTTGAGDTFNGALAVALSKGMSLEDACRFANAAAALSVTKLGAQG 278
Query: 363 SMPDRKSVLNLLQ 375
MP + V LQ
Sbjct: 279 GMPTEEEVKKFLQ 291
>gi|409406101|ref|ZP_11254563.1| sugar kinase [Herbaspirillum sp. GW103]
gi|386434650|gb|EIJ47475.1| sugar kinase [Herbaspirillum sp. GW103]
Length = 299
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 167/308 (54%), Gaps = 17/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP---TYFVGQ 126
+V++GS N D+ + + R+P GET+A T+ GGKGANQA A+LS P V
Sbjct: 2 IVIIGSVNMDLVLRVPRMPLPGETLAGDKFMTIPGGKGANQAVACARLSAPGTAVAMVAC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VGEDA G+ + +++ CG+ Y++ V G TG A +M+ ++ QNSI+I G N
Sbjct: 62 VGEDAFGQQMRQSITACGIDDRYIDEV--AGEATGIASIMVDANAQNSIVIAAGANGRLD 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+ + ++++A IVLLQ E+P + I + A + G V+ + + +P+ELL
Sbjct: 120 VERI-ERARPLIEQASIVLLQLEVPMATVIHSIELAHALGKIVVLNPAPAQS-LPRELLQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG-SALFVEGEKP 305
ID L NE E L +D ++ K H +G + V+V LG KG F +G
Sbjct: 178 KIDYLILNEIEAAMLAEEQSDDIALLAH---KLHDLGARNVVVTLGEKGVYGSFADG--- 231
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+Q +PA +V +DTT AGDTF F +G+ + + L +A AAA+L V GA S
Sbjct: 232 -RQRHLPARKVQAVDTTAAGDTFIGGFIGAIAQGRDQFDALAYAQAAAALSVTRVGAQTS 290
Query: 364 MPDRKSVL 371
+P R V+
Sbjct: 291 IPLRDEVV 298
>gi|336412622|ref|ZP_08592975.1| ribokinase [Bacteroides ovatus 3_8_47FAA]
gi|335942668|gb|EGN04510.1| ribokinase [Bacteroides ovatus 3_8_47FAA]
Length = 321
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 168/325 (51%), Gaps = 32/325 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D+ ++ LP GETV GGKGANQA A+L FV +G
Sbjct: 3 VVVIGSSNIDMVAQVSHLPAPGETVGDANFMQSLGGKGANQAVAAARLGGSVTFVTSLGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D ++ + G+ DY ++ D PTG A++ + + G+N I + G N S P
Sbjct: 63 DMYADILKNHFKKEGIATDY--IIDDVNHPTGTALIFVANSGENCIAVAPGANYSLLPGS 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
EV+ +A I+++Q EIP ++A +++ G V+F+ AP I +EL+
Sbjct: 121 ITHFS-EVIDEADIIVMQAEIPYETIKKIALSSKQKGKKVLFNP----APACLIDEELMK 175
Query: 247 FIDILSPNESELGRLTGM--PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
IDIL NE E ++G+ ++ E+I++ ++K G V++ LG++G ++++ K
Sbjct: 176 AIDILVVNELEAAFISGIDYTDNNLEEIAKTLLKA---GTSNVVITLGSQG--VYMKNRK 230
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
Q +P +V IDT AGDTF + AV + + E L FA AA++ V GA P
Sbjct: 231 ETIQ--LPGCKVNAIDTIAAGDTFCGALAVFCAQREIDREALSFANTAAAIAVTRSGAQP 288
Query: 363 SMP-----------DRKSVLNLLQY 376
S+P + ++LNL+ +
Sbjct: 289 SIPTLDEVKHFILENESTLLNLMNH 313
>gi|313897041|ref|ZP_07830588.1| ribokinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974488|gb|EFR39956.1| ribokinase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 313
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 142/301 (47%), Gaps = 6/301 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+P GET+ A GGKGANQA AK + V +VG
Sbjct: 3 IAVIGSNMVDLTAYIDRMPAPGETLEAPDFALGCGGKGANQAVAAAKYDADVWMVTKVGS 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + CGV Y V+ +G A + + GQNSI+I+ G N P
Sbjct: 63 DIFADNTIANFNACGVNTTY---VRKTEGSSGVAPIFVDRSGQNSILIIKGANNRLLPRD 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
DE +KK G++LLQ E+P + +PV+ + + E + D
Sbjct: 120 I-DEAEADLKKCGMILLQLEVPLETVYYAIDFGQKHSIPVLLNPAPATKDLSIEKVCACD 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
PNE+EL LTGMP ++ E+I A G++ V+V +G +GS GE ++
Sbjct: 179 FFVPNETELAILTGMPAETVEEIERAAETLLARGLKNVIVTMGGRGSLWMTGGETYRLEA 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
AA +DT+GAGD F FA +V ++ A+A A+L V KG S P +
Sbjct: 239 YKVAA--VDTSGAGDAFIGCFAGCYVRHGDVRAAMQTASAFAALSVTAKGTQMSYPTKAE 296
Query: 370 V 370
V
Sbjct: 297 V 297
>gi|416052838|ref|ZP_11578473.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991630|gb|EGY33093.1| ribokinase [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 310
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 158/308 (51%), Gaps = 9/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY---FVGQ 126
LVV+GS N D + + R + GET+ + GGKGANQA A+L F+
Sbjct: 5 LVVLGSVNADHVIRVPRFARAGETLRGAGYRIAYGGKGANQAVAAARLKDQNTQVDFIAC 64
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
+G D G + A + G+ M ++ TG A++ + G+NSI+I G N +
Sbjct: 65 IGNDDIGHAMKAAFASDGINTATMTQIEQE--MTGVAMIQVADSGENSIVISAGAN-AYL 121
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E +++A +L+Q E P S A+ + G VI + A +P+EL +
Sbjct: 122 DEHIVSRYAAHIQQADALLMQLETPLSAICLAAQIEQQQGTKVILNPAPAQA-LPEELFH 180
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ +++PNE+E LTG+ + ++A K H+ GVQ VL+ LGAKG + G+ I
Sbjct: 181 RLYMITPNETEAEILTGIKVEDEISAAQAAEKLHQFGVQIVLITLGAKGVYVSENGQGKI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
A+ DTT AGDTF + V +EGK+ + +RFA AAA++ V +GA PS+P
Sbjct: 241 IGGFRVKAK--DTTAAGDTFNGALVVALLEGKTLTDAIRFAHAAAAIGVTREGAQPSIPH 298
Query: 367 RKSVLNLL 374
R L+ L
Sbjct: 299 RAETLDFL 306
>gi|269925475|ref|YP_003322098.1| ribokinase [Thermobaculum terrenum ATCC BAA-798]
gi|269789135|gb|ACZ41276.1| ribokinase [Thermobaculum terrenum ATCC BAA-798]
Length = 308
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 169/310 (54%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS+N D+ V + +P VGETV GGKGANQA A+L F+G VG
Sbjct: 5 VVVVGSSNTDMVVPVPHIPGVGETVLGGDLIIAPGGKGANQAVAAARLGAEVVFIGAVGS 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ L+ G+ Y+ +V G P+G A++M+ G NSI + G N +PE
Sbjct: 65 DDFGQKAIKGLNADGIDTSYVKIVD--GTPSGVALIMVDPSGNNSIAVSPGANSRLFPED 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ +V++ A I+L Q E+P D+V + + V ++ A +P ++++ +
Sbjct: 123 I-ELSSKVLQNARILLTQLEVPLDTVATALEFGKKMDCVTMLNPAPAPATGLPSDIISHV 181
Query: 249 DILSPNESELGRLTG--MPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
D+++PNE E L G MP+ E +++A++ +GV+ V++ LG +G AL + +K +
Sbjct: 182 DVITPNEVEARALVGRDMPS---EDLAKALL---DLGVKIVILTLGERG-ALVAQQDKLV 234
Query: 307 KQSIIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
++ P A +DTT AGD F+ + AV EG + +RFA AAA+L V GA PSMP
Sbjct: 235 --AVEPFAVSPVDTTAAGDAFSGALAVAIAEGLELIDAVRFANAAAALSVTKMGAQPSMP 292
Query: 366 DRKSVLNLLQ 375
R + L
Sbjct: 293 TRAELETFLS 302
>gi|15673621|ref|NP_267795.1| ribokinase [Lactococcus lactis subsp. lactis Il1403]
gi|281492220|ref|YP_003354200.1| ribokinase [Lactococcus lactis subsp. lactis KF147]
gi|385831097|ref|YP_005868910.1| ribokinase [Lactococcus lactis subsp. lactis CV56]
gi|20139703|sp|Q9CF42.1|RBSK_LACLA RecName: Full=Ribokinase
gi|12724649|gb|AAK05737.1|AE006394_7 ribokinase [Lactococcus lactis subsp. lactis Il1403]
gi|281375891|gb|ADA65385.1| Ribokinase [Lactococcus lactis subsp. lactis KF147]
gi|326407105|gb|ADZ64176.1| ribokinase [Lactococcus lactis subsp. lactis CV56]
Length = 300
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 159/309 (51%), Gaps = 36/309 (11%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLS-HPTYFVGQVGED 130
V+GS + D+ +R+P GETV + + GGKGANQA A+LS + +G VG+D
Sbjct: 6 VIGSISMDLVTRTNRVPNAGETVFGEDFAMVPGGKGANQAVAFARLSPNEVSMIGAVGKD 65
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVP--TGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
A G+ I V + NV G VP TG A + L D N III+ G N P
Sbjct: 66 AFGESILQNFKENAVLFE--NV---GTVPQTTGIAQITLYDD-DNRIIIIPGANNEVLPS 119
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ-----E 243
D E +K++ +V+LQ EIP N+ +AK + + V+++ P P E
Sbjct: 120 YLADL-WEKIKESQLVILQNEIPHETNLAIAKFCKENAIKVLYN------PAPARKTDLE 172
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
+++F+D ++PNE E L P + E+I K +++V LG++G +F +GE
Sbjct: 173 MIDFVDYITPNEHECKEL--FPNLALEEI-------LKKYSNRLIVTLGSEG-VIFHDGE 222
Query: 304 KPIKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
K IPA A+V+DTTGAGDTF +FA G E S + +R A A+ L +Q GA
Sbjct: 223 TLQK---IPAIKAKVVDTTGAGDTFNGAFAFGLTENLSISDSIRLAVVASHLSIQKFGAQ 279
Query: 362 PSMPDRKSV 370
MP V
Sbjct: 280 GGMPKLSEV 288
>gi|386839595|ref|YP_006244653.1| ribokinase [Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|374099896|gb|AEY88780.1| putative ribokinase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451792889|gb|AGF62938.1| putative ribokinase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 297
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 164/303 (54%), Gaps = 17/303 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ + + P+ GETV + +T+ GGKGANQA A+ +G VG
Sbjct: 4 IAVLGSTNMDLVTYVGKAPQRGETVTGREFRTIPGGKGANQAIAAARAGATVSMIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + D L GV D++ V+ P+G A +++ +G N+I+++ G N +
Sbjct: 64 DAFGARLRDTLEHSGVDTDFLRTVEG---PSGTAHIVVDDEGGNAIVVIPGANGTVDHLS 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
GDE V+ A +LLQ EIP + + A+AAR G+ + + P+P ELL +D
Sbjct: 121 PGDEG--VIATADALLLQLEIPLAAVVAGAQAARRHGIRTVLTPSPVQ-PLPPELLAAVD 177
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L PNE E LTG TD EA + V +V+V LGA G G +P+
Sbjct: 178 LLVPNEYEAVTLTGR-TDP----REAAATLLDL-VPEVVVTLGATGCLYLTRGAEPL--- 228
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++PA RV +D+TGAGDTF + AV E K E L +AA AA++ VQ +GA SMP R
Sbjct: 229 VVPAPRVRAVDSTGAGDTFVGTLAVALAEEKPVREALSWAATAAAISVQREGASASMPYR 288
Query: 368 KSV 370
+
Sbjct: 289 PEI 291
>gi|424857428|ref|ZP_18281582.1| ribokinase [Enterococcus faecium R499]
gi|402928837|gb|EJX48653.1| ribokinase [Enterococcus faecium R499]
Length = 305
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFNAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + D + + G TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENI--DTSGIAEIQGATTGQAMIMVDAAGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F +K +
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTKK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|238795152|ref|ZP_04638741.1| Ribokinase [Yersinia intermedia ATCC 29909]
gi|238725510|gb|EEQ17075.1| Ribokinase [Yersinia intermedia ATCC 29909]
Length = 308
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 159/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + +++ P+ GETV K + GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNVEQFPRPGETVIGKQYKVAFGGKGANQAVAAGRSGANIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+ + + + D TG A++ + +G+N I I G N + PE
Sbjct: 66 DDIGDRVRQQLASDNIDTAPIEAIAD--TTTGVALIFVNGEGENVIGINAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
G V+ A +L+Q E P I AK A+ VI + AP +P ELL
Sbjct: 124 LGRYQQHVI-DADALLMQLESPLETVIAAAKLAKQHQTQVILNP----APARELPDELLT 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + ++A H G+ V++ LG++G L +G
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAAKAAQILHDKGIATVIITLGSRGVWLSEQG---- 234
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K ++ +V +DT AGDTF + +EG+ + +RFA AAA++ V GA PS+
Sbjct: 235 KGKLVAGFKVNAVDTIAAGDTFNGALLTALLEGQVMDSAVRFAHAAAAIAVTRPGAQPSI 294
Query: 365 PDRKSVLNLLQ 375
P R + + LQ
Sbjct: 295 PWRTEIDSFLQ 305
>gi|153805842|ref|ZP_01958510.1| hypothetical protein BACCAC_00079 [Bacteroides caccae ATCC 43185]
gi|423219703|ref|ZP_17206199.1| ribokinase [Bacteroides caccae CL03T12C61]
gi|149130519|gb|EDM21725.1| ribokinase [Bacteroides caccae ATCC 43185]
gi|392624908|gb|EIY18986.1| ribokinase [Bacteroides caccae CL03T12C61]
Length = 311
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 163/313 (52%), Gaps = 23/313 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS+N D+ ++ LP GETV GGKGANQA A+L FV +G
Sbjct: 3 VVVIGSSNIDMVAQVSHLPAPGETVGDANFMQSLGGKGANQAVAAARLGGFVTFVTSLGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D ++ + G+ DY ++ D PTG A++ + G+N I + G N S P
Sbjct: 63 DMYADILKNHFKKEGITTDY--IIDDVNHPTGTALIFVADSGENCIAVAPGANYSLLPGS 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V+ +A I+++Q EIP ++A +A+ G V+F+ AP I +EL+
Sbjct: 121 ITHFS-KVIDEADIIVMQAEIPYETIKKIALSAKKKGKKVLFNP----APACLIDEELMK 175
Query: 247 FIDILSPNESELGRLTGM--PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
IDIL NE E ++G+ ++ E+I+E ++K G V++ LG++G+ + K
Sbjct: 176 AIDILVVNELEASFISGIDYTDNNLEEIAETLLKA---GTSNVVITLGSQGAYM-----K 227
Query: 305 PIKQSI-IPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
K++I +P +V IDT AGDTF + AV + + E L FA AA++ V GA
Sbjct: 228 NAKETIQLPGCKVNAIDTIAAGDTFCGALAVVCAKKEIDREALNFANTAAAIAVTRSGAQ 287
Query: 362 PSMPDRKSVLNLL 374
PS+P V + +
Sbjct: 288 PSIPTLDEVKHFM 300
>gi|56421765|ref|YP_149083.1| ribokinase [Geobacillus kaustophilus HTA426]
gi|56381607|dbj|BAD77515.1| ribokinase [Geobacillus kaustophilus HTA426]
Length = 297
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 158/309 (51%), Gaps = 24/309 (7%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D+ R P GET+ + T GGKGANQA A+L +G V
Sbjct: 4 PTITVIGSLNMDLVTVAARFPNQGETILGEQFLTTPGGKGANQAVAAARLGANIRMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+ + +L G+ +DY+ V G TG A + + S+ N II+V G N + P
Sbjct: 64 GDDAFGQELIRSLQNEGISVDYVKPVTHGS--TGIASITI-SERDNRIIVVPGANHALTP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E D V+ ++ + LLQ EIP V + A GV VI + P+P +L
Sbjct: 121 EDL-DSCESVIAESDVCLLQLEIPLPVVERAVSIAHRHGVRVIVNPAPAQ-PLPPSVLEQ 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
L+PNE E L ++++ E +++V GAKG ++ +G+
Sbjct: 179 ASFLTPNEHERTIL-------FDKMDEEAF------ADKLIVTEGAKGVRIWQDGQ---- 221
Query: 308 QSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ +IP+ + V+DTTGAGDTF + AV EGK +E RFA AAA+L V GA MP
Sbjct: 222 ERLIPSFQVPVVDTTGAGDTFNGALAVALAEGKPLDEACRFANAAAALSVTKLGAQAGMP 281
Query: 366 DRKSVLNLL 374
R+ V + L
Sbjct: 282 RRQEVESFL 290
>gi|377577845|ref|ZP_09806826.1| ribokinase [Escherichia hermannii NBRC 105704]
gi|377541083|dbj|GAB51991.1| ribokinase [Escherichia hermannii NBRC 105704]
Length = 310
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 166/317 (52%), Gaps = 16/317 (5%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+NT LVV+GS N D + ++ PK GET+ Q GGKGANQA + F
Sbjct: 2 MNTTGKLVVLGSINADHILNLESFPKPGETLTGSHYQVAFGGKGANQAVAAGRSGADIAF 61
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ VG+D G+ + L+ ++D V TG A++ + ++G+N I I G N
Sbjct: 62 IACVGDDDTGRRVCTQLASD--KIDITPVATIADESTGVALIFVNAEGENVIGISAGANS 119
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---I 240
+ PE+ + +++ +A +L+Q E P + AK A+ VI + AP +
Sbjct: 120 ALTPERVNAQH-DLIAQASALLMQLESPVESVLAAAKIAKQNNTSVILNP----APARTL 174
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
ELL +DI++PNE+E +LTG+ +S + ++A + H G+ V++ LG++G V
Sbjct: 175 SDELLGLVDIITPNETEAEKLTGVKVESDDDAAQAAQRLHDKGINTVIITLGSRG----V 230
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
+ K +P +V +DT AGDTF + +EGK+ + +RFA AAA++ V +
Sbjct: 231 WASRDGKGQRVPGFKVEAVDTIAAGDTFNGALVTALLEGKALSDAIRFAHAAAAIAVTRR 290
Query: 359 GAIPSMPDRKSVLNLLQ 375
GA PS+P R + LQ
Sbjct: 291 GAQPSVPWRHEIDAFLQ 307
>gi|330718859|ref|ZP_08313459.1| ribokinase family sugar kinase [Leuconostoc fallax KCTC 3537]
Length = 312
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 160/308 (51%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D +++ R+P GET+A + T GGKGANQA A+ +FVG VG
Sbjct: 5 IVVLGSLNVDNILKMPRMPFEGETMALQDVTTAPGGKGANQAVAAARQGANVFFVGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG+ + L GV +D + V D VPTG A +MLQ +G N+I+I GG N + +
Sbjct: 65 DTNGQFMKTTLLTNGVNVDQVAVKSD--VPTGSAYIMLQENGANTIMIHGGANQALTLDH 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +++ KA I++ Q E+P +V A++ V I + I EL D
Sbjct: 123 V-EAARDIIAKADILVAQFEVPLAVITAAFAMAKAYNVQTILNPAPAVYSITPELAALTD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVV-KCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++ PNE+E L+G+ E + V K GV +V++ LG GS EG K+
Sbjct: 182 VIVPNETEAQLLSGIKVIPDEGVLNRVADKLLATGVPRVIITLGGAGS-FVAEGT---KR 237
Query: 309 SIIPAARVI--DTTGAGDTFTASFA-VGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ +V+ DTT AGDTF + A V + + + + A A++L V GAIPS+P
Sbjct: 238 WFVDPVKVLAQDTTAAGDTFIGTLANVLNKDFTNIDASVTRATYASALAVTRAGAIPSIP 297
Query: 366 DRKSVLNL 373
+ V N
Sbjct: 298 TYEEVDNF 305
>gi|134295669|ref|YP_001119404.1| ribokinase [Burkholderia vietnamiensis G4]
gi|134138826|gb|ABO54569.1| ribokinase [Burkholderia vietnamiensis G4]
Length = 308
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 138/297 (46%), Gaps = 6/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A + AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGRAYAQAAGGKGGNQAVAAARLGAQVAMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D V TG A++++ QN+I+IV G N P
Sbjct: 71 DAHGAALRAGLEAEGI--DCSRVATSASASTGVALIVVDDASQNTIVIVAGGNGEVTPAT 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 VAQHE-AAIAAADVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG-SALFVEGEKPIKQ 308
L PNE E LTG+P A G + VL+ LGA+G AL +G +
Sbjct: 188 YLIPNEVEAAALTGLPVRDPADAEAAARALQAAGARNVLITLGARGVQALSADGAA--RH 245
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P + +DTT AGDTF FA G + +RFA AA++ V GA PS+P
Sbjct: 246 YPAPVVQALDTTAAGDTFIGGFAARLAAGDGVDAAIRFAQRAAAVSVTRAGAQPSIP 302
>gi|444379774|ref|ZP_21178948.1| Ribokinase [Enterovibrio sp. AK16]
gi|443676156|gb|ELT82863.1| Ribokinase [Enterovibrio sp. AK16]
Length = 306
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 160/312 (51%), Gaps = 18/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLKADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I ++ G+ + + + D PTG A++ + G+NSI I N E
Sbjct: 64 DPFGVNIRESFKCDGINISGVKMQAD--CPTGIALIQVSDSGENSICISAEANAKLTAEA 121
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELL 245
+ +LE ++ A +L+Q E P D + + A+ + VI + AP +P+ LL
Sbjct: 122 I-EPELERIRHAEYLLMQLETPLDGIEL-AAQIGKRHDTKVILNP----APARELPESLL 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE+E LTG+ + A H G++ V++ LGAKG + GE
Sbjct: 176 ACIDIITPNETEAEVLTGVKVEDDASAKAAADILHGKGIETVMITLGAKGVYVSQNGEG- 234
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
I+P RV DTT AGDTF +F G +E E ++FA AAA++ V GA S
Sbjct: 235 ---QIVPGFRVEATDTTAAGDTFNGAFVTGLMESMPLESAIKFAHAAAAISVTRFGAQTS 291
Query: 364 MPDRKSVLNLLQ 375
+P R V L+
Sbjct: 292 IPTRDEVDEFLK 303
>gi|401680875|ref|ZP_10812785.1| ribokinase [Veillonella sp. ACP1]
gi|400218214|gb|EJO49099.1| ribokinase [Veillonella sp. ACP1]
Length = 295
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 144/301 (47%), Gaps = 16/301 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +G+
Sbjct: 4 IVVIGSCNMDIVVLADKRPAAGETIMGNELHIAHGGKGANQAVAAARLGAEVTMVGCIGQ 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G++I D L + DY+ V D T H + ++G NSII++ G N +
Sbjct: 64 DAYGQMILDNLKENHINTDYIVTVPDTTTGTAHITL---AEGDNSIIVIAGANAKV-DQS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 VVDNAWPAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPA-ADLNPEWLELAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P + E+ A +++V LG+KG GE
Sbjct: 179 YITPNEHELSAL--YPNKTTEETLLA-------NENKIIVTLGSKGVGYADNGEIHTVSG 229
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+ +DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 230 F--KVKPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTKDE 287
Query: 370 V 370
V
Sbjct: 288 V 288
>gi|313894125|ref|ZP_07827691.1| ribokinase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441689|gb|EFR60115.1| ribokinase [Veillonella sp. oral taxon 158 str. F0412]
Length = 295
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 143/305 (46%), Gaps = 16/305 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +GE
Sbjct: 4 IVVIGSCNMDIVVLADKRPTAGETIMGNELHIAHGGKGANQAVAAARLGAEVTMVGCIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G++I D L + DY+ V D T H + ++G NSII++ G N +
Sbjct: 64 DAYGQMIMDNLKENHINTDYIVTVPDTTTGTAHITL---AEGDNSIIVIAGANAKV-DQS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 VVDNAWSAIEQADLVMVQNEIPIPTIEYLVRRCHEANVKVLLNPAPA-ADLNPEWLELAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P S + A +++V LG+KG GE
Sbjct: 179 YITPNEHELSAL--YPNQSTKDTLLA-------NENKIIVTLGSKGVGYADNGEIHTVSG 229
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 230 F--KVEPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTKDE 287
Query: 370 VLNLL 374
V L
Sbjct: 288 VAAFL 292
>gi|237801022|ref|ZP_04589483.1| ribokinase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023879|gb|EGI03936.1| ribokinase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 306
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 157/301 (52%), Gaps = 15/301 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V+VGS N D+ + RLP+ GET++ +T T+ GGKGANQA A+L +G VG
Sbjct: 5 IVIVGSLNMDLVIRAQRLPRPGETLSGETFDTVPGGKGANQAVAAARLGAGVAMIGCVGA 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP-- 187
DA G+ + AL + + VV+ GV TG A +++ ++ QN+I+IV G N P
Sbjct: 65 DAYGEHLRAALLAESIDCQAVTVVE--GVSTGIASIVVDANSQNAIVIVAGGNGRLTPAL 122
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+F ++ + IV+ Q E+P A + G VI + P+P+
Sbjct: 123 IERFD----ALLAGSEIVICQLEVPTETVFHTLTRAHALGKTVILNPAPASEPLPENWYG 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID L PNESE LTG+ DS +A G + V++ LG +G+ LF + +
Sbjct: 179 LIDYLIPNESEAQTLTGVTVDSPAAAEKAAATMLAAGARNVIITLGERGT-LFASADG-V 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ I A RV +DTT AGDTF FA G+S + + F AAA++ V GA PS+
Sbjct: 237 QH--IDARRVQAVDTTAAGDTFVGGFAAALAAGQSEPQAILFGQAAAAISVTRAGAQPSI 294
Query: 365 P 365
P
Sbjct: 295 P 295
>gi|332159636|ref|YP_004296213.1| ribokinase [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|386310396|ref|YP_006006452.1| ribokinase [Yersinia enterocolitica subsp. palearctica Y11]
gi|418241621|ref|ZP_12868147.1| ribokinase [Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
gi|433548840|ref|ZP_20504886.1| Ribokinase [Yersinia enterocolitica IP 10393]
gi|318603730|emb|CBY25228.1| ribokinase [Yersinia enterocolitica subsp. palearctica Y11]
gi|325663866|gb|ADZ40510.1| ribokinase [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|330861804|emb|CBX71977.1| ribokinase [Yersinia enterocolitica W22703]
gi|351779035|gb|EHB21162.1| ribokinase [Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
gi|431789881|emb|CCO67926.1| Ribokinase [Yersinia enterocolitica IP 10393]
Length = 308
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 158/309 (51%), Gaps = 12/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV K + GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVIGKQYKVAFGGKGANQAVAAGRSGANIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+ + + VV G TG A++ + +G+N I I G N + PE
Sbjct: 66 DDIGDRVRLQLASDNIDTAPIEVV--AGTTTGVALIFVNGEGENVIGIHAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
G +++ A +L+Q E P I AK A+ VI + AP +P ELL+
Sbjct: 124 LGRYQQQLI-DADALLMQLESPLKTVIAAAKLAKQHQTQVILNP----APARELPDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + + A H G+ V++ LG++G L +G+ +
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAARAAQILHDKGIATVIITLGSRGVWLSEQGQGKL 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+DT AGDTF + +EG++ +RFA AAA++ V GA PS+P
Sbjct: 239 VAGF--KVNAVDTIAAGDTFNGALLTALLEGQAMGSAVRFAHAAAAIAVTRPGAQPSIPW 296
Query: 367 RKSVLNLLQ 375
R + + LQ
Sbjct: 297 RAEIDSFLQ 305
>gi|424889508|ref|ZP_18313107.1| ribokinase [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393171726|gb|EJC71771.1| ribokinase [Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 309
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 147/307 (47%), Gaps = 7/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+V++G D + RLP + ET+ GGKG+NQA A F+ +VG
Sbjct: 7 IVILGIFAADTAYKAKRLPHIAETLMGSGFSLGPGGKGSNQAIAAAMAGGKVTFISRVGN 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPE 188
D G++ A S GV+ NV+K GV +G A + + + G N+II+V G E
Sbjct: 67 DPFGEMALAAYSQAGVK---ANVMKMDGVSSGAAFIFVDEVSGDNAIIVVPGAAGLIGIE 123
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D + ++ A I + Q E P + A+ AGV IF+ A IP E+
Sbjct: 124 DV-DANRAEIESAAIFMTQLEQPLEAALHGLAMAKRAGVTTIFNPAPARA-IPDEIYRLC 181
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D + PNE E L G P + EQ+ A G Q V++ LGA+G+ G+
Sbjct: 182 DFIVPNEVEAAELVGHPITTDEQVRAAGRTLLDRGAQAVIITLGARGAFYHSAGQSEFVP 241
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+ A VIDTTGAGD F FA EG++ E +RF +A A++ V G P+MP R
Sbjct: 242 AF-SAGNVIDTTGAGDAFLGGFATAISEGQTPIEAIRFGSATAAIAVTRPGTAPAMPSRA 300
Query: 369 SVLNLLQ 375
+ LL+
Sbjct: 301 EISALLR 307
>gi|427440413|ref|ZP_18924811.1| ribokinase [Pediococcus lolii NGRI 0510Q]
gi|425787629|dbj|GAC45599.1| ribokinase [Pediococcus lolii NGRI 0510Q]
Length = 312
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 155/309 (50%), Gaps = 10/309 (3%)
Query: 65 NTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFV 124
N + ++GS N D + + ++PK GET+ K + GGKGANQA + T F+
Sbjct: 10 NKLSTVTIIGSINLDRTIRVKQMPKPGETMHTKEIFSAGGGKGANQAVAAKRSEAKTNFI 69
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMS 184
G VG D G+ + D L + L + + + TG A +++ G+N I++ G NM+
Sbjct: 70 GAVGNDDAGRAMLDLLEHEDIDLSGVTTLDNQA--TGQAYIVVDDAGENEIMLHAGANMA 127
Query: 185 CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL 244
P+ + +V+K + V+ Q E + + A AGV I + +P +L
Sbjct: 128 FTPDYVASK-TDVIKNSDFVIAQFETGLEATTKAFEIAHEAGVKTILNPAPAIEKVPDDL 186
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L D++ PNE+E LTG+ + +A H G++ VL+ +G+KG+ V GE
Sbjct: 187 LAVTDMIIPNETETEILTGIEVTDEASMVKAAKALHDQGIKAVLITIGSKGTFYSVNGE- 245
Query: 305 PIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAI 361
I+PA +V +DTT AGDTF + + S ++ + + A+SL VQ GA
Sbjct: 246 ---TGIVPAFKVKAVDTTSAGDTFIGAMSTVLNPDFSNLKDAILYGNKASSLTVQRFGAQ 302
Query: 362 PSMPDRKSV 370
PS+P +K +
Sbjct: 303 PSIPYKKEL 311
>gi|15890145|ref|NP_355817.1| ribokinase [Agrobacterium fabrum str. C58]
gi|15158317|gb|AAK88602.1| ribokinase [Agrobacterium fabrum str. C58]
Length = 312
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 148/292 (50%), Gaps = 13/292 (4%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
VVGS D+ +DR+P GET+ A T + GGKGANQA A+L V +VG+D
Sbjct: 7 VVGSNMVDLITYVDRMPGPGETLEAPTFEMGCGGKGANQAVAAARLGAEVMMVTRVGDDV 66
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
L+ GV D +VVK G +G A + ++ G+NSI+IV G N P +
Sbjct: 67 FADNTIRNLASFGV--DTRHVVKVSGKSSGVAPIFVEQSGENSILIVKGANADLLPVEV- 123
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
D+ +K+ G++L+Q E+P + A G+ I + A + E + + L
Sbjct: 124 DKAAADLKECGLILMQMEVPVETVYHTIEFAAQNGIETILNPAPAAANLDPERIRQVTFL 183
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE----KPIK 307
PNESEL L+G+PTD+ E I A G++ V+V LGA+G+ + E +P+K
Sbjct: 184 VPNESELALLSGLPTDTDEDIVRAARSLIARGIRTVIVTLGARGARMITSDEIVNIEPVK 243
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
+ P DTTGAGD F SFA + E + L+ A+ A+ + G
Sbjct: 244 --VTPR----DTTGAGDAFIGSFARFYAETREVVSSLKKASLYAAHSITRPG 289
>gi|375010403|ref|YP_004984036.1| ribokinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359289252|gb|AEV20936.1| Ribokinase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 158/309 (51%), Gaps = 24/309 (7%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D+ R P GET+ + T GGKGANQA A+L +G V
Sbjct: 4 PTITVIGSINMDLVTVAARFPNQGETILGERFLTTPGGKGANQAVAAARLGANIRMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+ + +L G+ +DY+ V G TG A + + S+ N II+V G N + P
Sbjct: 64 GDDAFGQELIRSLQNEGISVDYVKPVTHGS--TGIASITI-SERDNRIIVVPGANHALTP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E D V+ ++ + LLQ EIP V + A GV VI + P+P +L
Sbjct: 121 EDL-DSCESVIAESDVCLLQLEIPLPVVERAVSIAHRHGVRVIVNPAPAQ-PLPPSVLEQ 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
L+PNE E L ++++ E +++V GAKG ++ +G+
Sbjct: 179 ASFLTPNEHERTIL-------FDKMDEEAF------ADKLIVTEGAKGVRIWQDGQ---- 221
Query: 308 QSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ +IP+ + V+DTTGAGDTF + AV EGK +E RFA AAA+L V GA MP
Sbjct: 222 ERLIPSFQVPVVDTTGAGDTFNGALAVALAEGKPLDEACRFANAAAALSVTKLGAQAGMP 281
Query: 366 DRKSVLNLL 374
R+ V + L
Sbjct: 282 RRQEVESFL 290
>gi|238027461|ref|YP_002911692.1| Ribokinase [Burkholderia glumae BGR1]
gi|237876655|gb|ACR28988.1| Ribokinase [Burkholderia glumae BGR1]
Length = 297
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 146/294 (49%), Gaps = 4/294 (1%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
+VGS N D+ V RLPK GET++ AGGKG NQA A+L +G++G+DA
Sbjct: 1 MVGSLNMDLVVRAPRLPKPGETLSGHGYAQAAGGKGGNQAVAAARLGARVAMLGRLGDDA 60
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG + AL ++D + GVPTG A++++ QN+I+IV G N PE
Sbjct: 61 NGAALRAALE--AEQIDCAALATSAGVPTGVALIVVDDASQNAIVIVAGGNGLVTPEDV- 117
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
++ A +++ Q E P +A R V+ + AP+P L +D L
Sbjct: 118 AAHDAMIAAADVLVCQLETPLPAVRAALEAGRRHACSVVLNPAPALAPLPDGWLPLVDWL 177
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSII 311
PNE E LTG+ + A + + G + V+V LG +G + + + +
Sbjct: 178 IPNEIEAAALTGVAIATPADAELAARQLAQAGARNVIVTLGGQG-VVARQADGSTRHYPA 236
Query: 312 PAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P +DTT AGDTF FA G++ +E +RFA AA+L V GA PS+P
Sbjct: 237 PKVEAVDTTAAGDTFIGGFAARLAAGETPDEAIRFALRAAALSVTRAGAQPSIP 290
>gi|424904289|ref|ZP_18327799.1| ribokinase [Burkholderia thailandensis MSMB43]
gi|390930267|gb|EIP87669.1| ribokinase [Burkholderia thailandensis MSMB43]
Length = 324
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 149/299 (49%), Gaps = 10/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ V RLP+ GET+A ++ AGGKG NQA A+L +G+VG
Sbjct: 20 VMVIGSLNMDLVVRAPRLPQPGETLAGRSFAQAAGGKGGNQAVAAARLGAQVAMLGRVGA 79
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D ++V TG A++++ QN+I+IV G+N PE
Sbjct: 80 DAHGAALRAGLVAEGIDCDALSVSTT--ATTGVALIVVDDASQNAIVIVAGSNGEVTPES 137
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
E + A +++ Q E PD+ A R G V+ + P+P + L +D
Sbjct: 138 IA-EHGAALAAADVLICQLETPDAAVRAALAAGRRLGKTVVLNPAPAVGPLPADWLPLVD 196
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFVEGEKPIKQ 308
L PNE E LTG+P A G + V+V LG +G AL +G
Sbjct: 197 YLIPNEIEAAALTGLPVRDPAGAEAAARALAAAGARNVIVTLGGQGVLALTADG----AA 252
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA RV +DTT AGDTF FA G + + +RFA AA+L V GA PS+P
Sbjct: 253 RHYPAPRVAPVDTTAAGDTFIGGFAARLAAGDAPHDAIRFAQRAAALSVTRAGAQPSIP 311
>gi|420156397|ref|ZP_14663240.1| putative ribokinase [Clostridium sp. MSTE9]
gi|394757695|gb|EJF40712.1| putative ribokinase [Clostridium sp. MSTE9]
Length = 318
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 153/309 (49%), Gaps = 18/309 (5%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V+ P GETV QT GGKGANQA A+L G+VG+D G+ +
Sbjct: 1 MDLIVKTGHFPNAGETVLGLDYQTAPGGKGANQAVQAARLGAQVTMAGRVGDDDFGRRLI 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQS-DGQNSIIIVGGTNMSCWPEKFGDEDLE 196
+ GV ++++V G+ + +Q+ +N II+V G NM+ P ED+
Sbjct: 61 ASCREAGVNTEFVSVDSTTYSAIGNVQLEVQNGTTRNRIIVVSGANMATRP-----EDVA 115
Query: 197 VVKKA----GIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILS 252
+K + +V+LQ EIP +N VA A VPV+ ++ AP+ ELL+ + +S
Sbjct: 116 FLKDSIAEYDMVMLQLEIPMQINELVAAYAYKKNVPVMLNSAP-SAPLSDELLSHLTYIS 174
Query: 253 PNESELGRLTGMPTD------SYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
PNE E LTG+P + + + +A GV+ V++ LG G A+ E +
Sbjct: 175 PNEHEAADLTGVPIRKDGKQVNMDDVHKAADTLLAKGVKNVVITLGNAG-AVVANKEAFL 233
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ I V D T AGD+F +F G S ++ L FA A+L V GA PS+P
Sbjct: 234 YEPCIDVVEVKDPTAAGDSFVGAFTASVCAGLSHKDALHFANYTATLTVSRMGAQPSLPK 293
Query: 367 RKSVLNLLQ 375
K V+ L+Q
Sbjct: 294 LKEVIALMQ 302
>gi|375103353|ref|ZP_09749616.1| sugar kinase, ribokinase [Saccharomonospora cyanea NA-134]
gi|374664085|gb|EHR63963.1| sugar kinase, ribokinase [Saccharomonospora cyanea NA-134]
Length = 314
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 152/296 (51%), Gaps = 11/296 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGSAN D+ V DR P GETV ++ L GGKGAN A A+L +G VG+
Sbjct: 24 VLVVGSANADLVVAADRRPAGGETVLGGDTEILPGGKGANTAVAAARLGADVALLGAVGD 83
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G L+ D+L GVR D + VV PTG A + + DG+NSI++ G N + PE
Sbjct: 84 DAHGSLLLDSLRKSGVRTDLVRVVPR---PTGLAFITVTPDGENSILVSPGANRALRPED 140
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ A ++++ EIP + A +AG I + + A +P+ L +D
Sbjct: 141 V----TSALPGAEVMVVSMEIPLATVEHAVNTAAAAGTRTILNLSPV-ASVPEPTLAVVD 195
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L N+ E L G D+ + SE + +G + +V GA+G A+ VE + + +
Sbjct: 196 LLLVNQHEAAWLLGGSEDTAVRTSE-LPGLLDLGPRGAVVTSGARG-AVVVEADG-LTEV 252
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P+ V+DTTGAGD F + A G + + + A A+ V +GA PS P
Sbjct: 253 PSPSVDVVDTTGAGDAFAGALATALSGGAALTDAVEQAVRVAAFSVTRRGAQPSYP 308
>gi|423332407|ref|ZP_17310191.1| ribokinase [Parabacteroides distasonis CL03T12C09]
gi|409229156|gb|EKN22036.1| ribokinase [Parabacteroides distasonis CL03T12C09]
Length = 307
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 22/309 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ V+ + LP+ GETV T GGKGANQA A+L F+ + G
Sbjct: 9 ILVVGSSNTDMVVKTNHLPRPGETVLGGTFFMNPGGKGANQAVAVARLGGQVSFICKTGS 68
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y + D P+G A++ + + +N I++ G N + P
Sbjct: 69 DIFGHQSQQLFEEEGIDTSY--IFSDPKNPSGVALITVDAHAENCIVVASGANANLLPSD 126
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE----- 243
+ E ++KA ++L+Q EIP D+V VAK A VI + P P +
Sbjct: 127 LAKSE-EAIEKADLILMQLEIPMDTVEF-VAKMASKKNKRVILN------PAPAQTLSAT 178
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL + +++PNE+E ++G+ +A +MGVQ V+V LG+KG+ ++ +
Sbjct: 179 LLRHLYMITPNETEAEMISGVKITDEVSAKKAAQVIMEMGVQNVIVTLGSKGALIYCDS- 237
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA +V +DTT AGD F + V EG+ E +RFA A+++ V GA
Sbjct: 238 ---MVDMVPAIKVEAVDTTAAGDIFNGALTVALAEGRDLREAVRFACKASAISVTRVGAQ 294
Query: 362 PSMPDRKSV 370
S+P R V
Sbjct: 295 SSVPYRNEV 303
>gi|420260669|ref|ZP_14763344.1| ribokinase [Yersinia enterocolitica subsp. enterocolitica WA-314]
gi|404511879|gb|EKA25739.1| ribokinase [Yersinia enterocolitica subsp. enterocolitica WA-314]
Length = 308
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 158/309 (51%), Gaps = 12/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV K + GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVIGKQYKVAFGGKGANQAVAAGRSGANIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+ + D + G TG A++ + +G+N I I G N + PE
Sbjct: 66 DDIGDRVRLQLASDNI--DTAPIEAVAGTTTGVALIFVNGEGENVIGIHAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
G +V+ A +L+Q E P I AK A+ VI + AP +P ELL+
Sbjct: 124 LGRYQQQVI-DADALLMQLESPLETVIAAAKLAKQHQTQVILNP----APARELPDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + ++A H G+ V++ LG++G L +G+ +
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAAKAAQILHDKGIATVIITLGSRGVWLSEQGQGKL 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+DT AGDTF + +EG++ +RFA AAA++ V GA PS+P
Sbjct: 239 VAGF--KVNAVDTIAAGDTFNGALLTALLEGQAMGSAVRFAHAAAAIAVTRPGAQPSIPW 296
Query: 367 RKSVLNLLQ 375
R + + LQ
Sbjct: 297 RAEIDSFLQ 305
>gi|238019799|ref|ZP_04600225.1| hypothetical protein VEIDISOL_01674 [Veillonella dispar ATCC 17748]
gi|237863323|gb|EEP64613.1| hypothetical protein VEIDISOL_01674 [Veillonella dispar ATCC 17748]
Length = 295
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 147/307 (47%), Gaps = 20/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N DI V D+ P GET+ GGKGANQA A+L VG +GE
Sbjct: 4 IVVIGSCNMDIVVLADKRPAAGETIMGNELHIAHGGKGANQAVAAARLGAEVTMVGCIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G++I D L + DY+ V + T H + ++G NSII++ G N +
Sbjct: 64 DAYGQMILDNLKENFINTDYIVTVPNTTTGTAHITL---AEGDNSIIVIAGANAKV-DKS 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +++A +V++Q EIP + + A V V+ + A + E L
Sbjct: 120 VVDNAWSAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPA-ADLNPEWLELAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++PNE EL L P S E+ A +++V LG+KG GE
Sbjct: 179 YITPNEHELSAL--YPNQSTEETLLA-------NENKIIVTLGSKGVGYADNGEI----H 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ +V +DTTGAGDTF +FA V GKS + L + AAA+L +Q GA MP +
Sbjct: 226 TVSGFKVDPVDTTGAGDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTK 285
Query: 368 KSVLNLL 374
V L
Sbjct: 286 DEVAAFL 292
>gi|170703980|ref|ZP_02894638.1| ribokinase [Burkholderia ambifaria IOP40-10]
gi|170131109|gb|EDS99778.1| ribokinase [Burkholderia ambifaria IOP40-10]
Length = 291
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 132/288 (45%), Gaps = 4/288 (1%)
Query: 78 FDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGKLIT 137
D+ V RLP GET+A AGGKG NQA A+L +G VG DA+G +
Sbjct: 1 MDLVVRSPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGAQVTMIGCVGADAHGAALR 60
Query: 138 DALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDEDLEV 197
L G+ D + TG A++++ QN+I+IV G N PE +
Sbjct: 61 AGLEAEGI--DCARLATSAAASTGVALIVVDDASQNTIVIVAGGNGEVTPETVARHE-AA 117
Query: 198 VKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSPNESE 257
+ +++ Q E P A R G V+ + AP+P L +D L PNE E
Sbjct: 118 LAATDVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPGGWLPLVDYLIPNEVE 177
Query: 258 LGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPAARVI 317
LTG+P + + A G + VL+ LGA+G L + + + P I
Sbjct: 178 AAALTGLPVRNPAEAEVAARMLQAGGARNVLITLGARG-VLALPADGATRHYPAPVVHAI 236
Query: 318 DTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
DTT AGDTF FA G+ + +RFA AA+L V GA PS+P
Sbjct: 237 DTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPSIP 284
>gi|389816202|ref|ZP_10207365.1| ribokinase [Planococcus antarcticus DSM 14505]
gi|388465195|gb|EIM07514.1| ribokinase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 163/308 (52%), Gaps = 24/308 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V+ D PK GETV +T+ GGKGANQA A+L + +G VG+
Sbjct: 2 ITVVGSINMDLVVQTDCFPKQGETVLGNLYETVPGGKGANQAVAAARLGSDVHMIGAVGQ 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + L GV++ + + DG +G A ++L S+G N II+V G N S E+
Sbjct: 62 DAFGTELLSGLKSEGVQVKGIKRI-DG--ASGIANILL-SEGDNRIIVVPGANYSVTAEE 117
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD---AGGMDAPIPQELLN 246
E + + +V++Q E+ V Q + GVP + + A G A + L
Sbjct: 118 IAS-FTEQLAASDLVIMQLEMLIPVIQQTLEICHQNGVPSMLNPAPASGFTA----DFLP 172
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ L+PNE+E + G +++E+ E +++V LG KG A F +G+K I
Sbjct: 173 YCTYLTPNETEAEEIFG---ENWEKALEEYPN-------RLVVTLGQKG-AQFYDGQKHI 221
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ + +DTTGAGDTF + A VEG+ E +RFA AAASL V+ GA MP+
Sbjct: 222 TVKGF-STKTVDTTGAGDTFNGALAAALVEGQEFEGAVRFANAAASLSVEKFGAQGGMPN 280
Query: 367 RKSVLNLL 374
R +VL +
Sbjct: 281 RAAVLERM 288
>gi|294497689|ref|YP_003561389.1| ribokinase [Bacillus megaterium QM B1551]
gi|294347626|gb|ADE67955.1| ribokinase [Bacillus megaterium QM B1551]
Length = 292
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 167/304 (54%), Gaps = 22/304 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + P GETV ++ +T+ GGKGANQA A+L +G VGE
Sbjct: 4 VTVIGSSSMDLVVTSNIRPGAGETVLGESFKTVPGGKGANQAVAAARLGADVSMIGCVGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I + GV ++ NV G +G A ++L ++G NSI++V G N P+
Sbjct: 64 DHYGKAILENFKSNGVSVE--NVKPVTGSDSGTAHIIL-AEGDNSIVVVKGANDYITPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++ E +K+A IVL+Q+EIP+ VA+ + VP++ + P+ E++ +
Sbjct: 120 YVEKAKEKIKEADIVLIQQEIPEETVEYVAQLCQELKVPLLLNPAPAR-PLKAEVIEQVS 178
Query: 250 ILSPNESELGRLTGMPTDSYE-QISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
++PNE E L +E + E V+K + ++ + G +G F GEK +
Sbjct: 179 YITPNEHEAELL-------FEGKEKEEVLKQYP---NKLFITEGKQGVRYF-NGEKEV-- 225
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++P+ +V IDTTGAGDTF A+ AV EG E+ ++FA AASL V GA MP
Sbjct: 226 -LVPSYQVETIDTTGAGDTFNAALAVALAEGMGFEKGIQFANRAASLSVTKFGAQGGMPT 284
Query: 367 RKSV 370
RK V
Sbjct: 285 RKEV 288
>gi|160931855|ref|ZP_02079248.1| hypothetical protein CLOLEP_00686 [Clostridium leptum DSM 753]
gi|156869192|gb|EDO62564.1| putative ribokinase [Clostridium leptum DSM 753]
Length = 318
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 154/301 (51%), Gaps = 3/301 (0%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ + I R P GE++ + GGKG+N+A +L F ++G+
Sbjct: 6 ILVVGSSNTDVILRIPRYPLQGESLVVYKREQALGGKGSNRAVALTRLGADLDFCCKLGK 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G+ I DA GV + + + G TG A +ML+ G N+I+ G N + +K
Sbjct: 66 DASGEFILDAYEKEGVSREMVLLGDTEG--TGTAYIMLEDSGSNTILSYLGANGD-YTQK 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D L + G + + E + KA++ G + DAG + +P E
Sbjct: 123 DIDVVLSKLSHYGYLCMDLEFSLEAIRAILKASKEGGPKAVIDAGPVRKELPLEAFRGAY 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+LSPNE+E +TG+ + +A ++ G + V++K G +G+ L+ + +
Sbjct: 183 VLSPNETEASGMTGIKITDRDSAEKACAALYQSGCENVILKWGKQGALLYDGTDFSHFPA 242
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
+ +V+DTT AGD F A EG S +E ++FA AAS+ V GAIPS+P+RK
Sbjct: 243 YSGSGKVVDTTAAGDCFMAGLTCRLSEGYSLKESIQFANIAASIAVTRLGAIPSLPNRKE 302
Query: 370 V 370
V
Sbjct: 303 V 303
>gi|422006823|ref|ZP_16353811.1| ribokinase [Providencia rettgeri Dmel1]
gi|414098014|gb|EKT59664.1| ribokinase [Providencia rettgeri Dmel1]
Length = 309
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 160/307 (52%), Gaps = 9/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + + P+ GETV Q GGKGANQA + F+ VG+
Sbjct: 6 LVVLGSINADHILNVKHFPQPGETVRGDHYQVAFGGKGANQAVAAGRSGADITFIACVGD 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I LS ++ + ++ ++ G TG A++ + G+N+I I G N E+
Sbjct: 66 DDIGASIKKQLSLDNIKTECIDAIE--GETTGVALIYVNQQGENTIGINAGANAQLTKER 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
G ++V+ A VL+Q E P A+ A+ VI + + +P LL+ +D
Sbjct: 124 LGHYQQKIVE-ADAVLMQLESPIETVQMAAEIAKKNNTKVILNPAPAQS-LPDSLLSLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ + + +A H+ G+ +V++ LG++G EK +
Sbjct: 182 IITPNETEAEHLTGIAVNDNQGAQDAAEVLHQKGISKVMITLGSRG---VWYSEKGAEGK 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
II A RV +DT AGDTF ++ +EGK+ EE + FA AAA++ V GA PS+P R
Sbjct: 239 IISAFRVKAVDTIAAGDTFNGAYVTALLEGKADEEAIIFAHAAAAIAVTRPGAQPSVPWR 298
Query: 368 KSVLNLL 374
K + L
Sbjct: 299 KEIDQFL 305
>gi|303235176|ref|ZP_07321796.1| putative ribokinase [Finegoldia magna BVS033A4]
gi|302493768|gb|EFL53554.1| putative ribokinase [Finegoldia magna BVS033A4]
Length = 292
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 22/301 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D ++ PK GET+++ + GGKGANQA KL F+ VG
Sbjct: 3 ILVIGSVNVDTTYNLENFPKPGETISSLSKSRSVGGKGANQAIACQKLGGDVKFLACVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + I + GV D N++K V TG A++ + GQN I++ G N + +
Sbjct: 63 DMDADFIFKNMREYGV--DTSNIIK-KDVDTGTALINVDKTGQNQIVLDHGANYAISIQD 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
D+++E++ + I++LQ EIP VN K A+ GV VI + P P E +
Sbjct: 120 I-DDNIELLDECDILILQMEIPQEVNEYAIKKAKEKGVFVILN------PAPSEFEVENI 172
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ +D+ PNE+E+ R + S + + EA + V V++ LG GS F + E
Sbjct: 173 LDKVDLFVPNENEILRYS-----SKKNLKEAAAELLDKNVGSVIITLGENGSEYFSKTEH 227
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IKQ I A V DTT AGD++ + AV + KS +E + FA +S V KG+ S+
Sbjct: 228 -IKQEAIKADAV-DTTSAGDSYIGAMAVMLDQKKSIKEAMEFATKVSSKTVTRKGSGESI 285
Query: 365 P 365
P
Sbjct: 286 P 286
>gi|358064694|ref|ZP_09151256.1| hypothetical protein HMPREF9473_03319 [Clostridium hathewayi
WAL-18680]
gi|356697029|gb|EHI58626.1| hypothetical protein HMPREF9473_03319 [Clostridium hathewayi
WAL-18680]
Length = 637
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 152/304 (50%), Gaps = 16/304 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS N D+ + ++ LP+ G+T++ + GGKGANQ+ AKL + +G+VG
Sbjct: 328 IVVVGSINIDVTLNVNELPQPGKTISTNKHSVIPGGKGANQSVGVAKLENEVALIGRVGN 387
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + L+ + V D + +D TG A + +Q+DG++ I I+ G N + P
Sbjct: 388 DYDSTLVYTCMEEHHV--DIQGIRRDIRAETGKAYIHVQNDGESMITILAGANQNLSPAD 445
Query: 190 FGD-EDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
EDL + + LLQ E+P++ + A+ A GV I ++ I L+ +I
Sbjct: 446 VNHYEDL--FEHSEYCLLQTEVPEAAVFEAARQAHKHGVKNILKPAAINQ-INHSLMQYI 502
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI PN E L D E +EA MG + V++ LG G +++ +
Sbjct: 503 DIFVPNRKEAEILCPEKPD-IESKAEAF---QAMGARTVIITLGHHGC--YIKDDSFC-- 554
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PAA +DTTGA D F A+ AV + G S + A AA CV +G IP+M D
Sbjct: 555 GYLPAADFVPVDTTGAADAFIATLAVYLLNGHSLVNAAKIATYAAGFCVSRQGVIPAMID 614
Query: 367 RKSV 370
R S+
Sbjct: 615 RNSL 618
>gi|398794645|ref|ZP_10554683.1| sugar kinase, ribokinase [Pantoea sp. YR343]
gi|398208421|gb|EJM95149.1| sugar kinase, ribokinase [Pantoea sp. YR343]
Length = 320
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 152/318 (47%), Gaps = 32/318 (10%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V GS N D+ ++R P GE++ A TS GGKGANQA + +++G++G D
Sbjct: 7 VFGSFNLDVVAVMNRFPMPGESLTAHTSMMGPGGKGANQATAALRAGARVHYIGKIGNDD 66
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQ-SDGQNSIIIVGGTNMS------ 184
G L G D + + PTG+A++ + D +N I + G N +
Sbjct: 67 FGMFARRHLEKTG--FDAITLFTCKEKPTGNALIYVAGDDAENMISVYPGANTTVTAAEV 124
Query: 185 --CWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ 242
C P V A I+L+Q E S ++ AR+ G VI + P P
Sbjct: 125 TRCQP---------TVAAADILLVQLENNLSAIQRMIDNARAGGTFVIMN------PAPW 169
Query: 243 E-----LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSA 297
+ LL +D+L+PN +E +LTG+ + +A K H+ G +QV++ LG G+
Sbjct: 170 QKVTDALLAKVDLLTPNSTEAMQLTGVKVTDFASAQQAAEKLHRKGARQVIITLGVSGAL 229
Query: 298 LFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQV 357
L V + P++ + P A+ +DTTGAGD F + A G + FA+A ASLCV+
Sbjct: 230 LSVAEQPPLRIPLFP-AQPLDTTGAGDAFNGALAARLASGDELPQAALFASAYASLCVER 288
Query: 358 KGAIPSMPDRKSVLNLLQ 375
GA SMP L LQ
Sbjct: 289 SGAAHSMPSYAEALARLQ 306
>gi|118498321|ref|YP_899371.1| ribokinase [Francisella novicida U112]
gi|194323908|ref|ZP_03057683.1| ribokinase [Francisella novicida FTE]
gi|118424227|gb|ABK90617.1| ribokinase, pfkB family [Francisella novicida U112]
gi|194321805|gb|EDX19288.1| ribokinase [Francisella tularensis subsp. novicida FTE]
Length = 306
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 152/297 (51%), Gaps = 5/297 (1%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GSAN D+ V++D+L + G+T+ ++ + GGKGANQA +L F+ +G
Sbjct: 2 SVVVIGSANRDLVVKVDQLAQKGQTIISQNYEEFCGGKGANQAVAARRLGENVTFITNLG 61
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D+ G + + G LD + +D G TG A + + + GQN I +V G N +
Sbjct: 62 KDSFGDRLLEFYKKEG--LDSSTINQDSGSNTGLAFICVDNQGQNIINVVMGANAK-LDQ 118
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D+ + +++A I+L Q E P +A ++ A + +PQELL +
Sbjct: 119 QILDKHNQKIQQAKIILTQLETPLETIEYLADKISDKQTFILNPAPARE--LPQELLKKV 176
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DIL+PNE+E L+G+ +A + H GV +++ LG +G+ L + K
Sbjct: 177 DILTPNETEASILSGIEVKDVNTAKQAAKELHNKGVATIIITLGEQGALLSKNNGQEQKL 236
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
V+DTT AGDTF A +G S E+ + A AA+L V ++GA S P
Sbjct: 237 FATKKVDVVDTTAAGDTFNGVLAFCLDKGLSIEQSIEIANTAAALAVTIEGAEDSAP 293
>gi|300311612|ref|YP_003775704.1| sugar kinase [Herbaspirillum seropedicae SmR1]
gi|300074397|gb|ADJ63796.1| sugar kinase protein [Herbaspirillum seropedicae SmR1]
Length = 299
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 164/308 (53%), Gaps = 17/308 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP---TYFVGQ 126
+V++GS N D+ + + R+P GET+A T+ GGKGANQA A+L+ P V
Sbjct: 2 IVIIGSVNMDLVLRVPRMPLPGETLAGDRFMTIPGGKGANQAVACARLAAPGTRVAMVAC 61
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG+DA G + +++ CG+ Y++ V G TG A +M+ ++ QNSI+I G N
Sbjct: 62 VGDDAFGGQMRQSITACGIDDRYIDEV--AGEATGIASIMVDANAQNSIVIAAGANGRLD 119
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E+ + ++++A IVLLQ E+P + I + A + G V+ + A +P+ LL
Sbjct: 120 VERI-ERARALIEQASIVLLQLEVPMATVIHSIELAHALGKTVVLNPAPAQA-LPRALLQ 177
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG-SALFVEGEKP 305
ID L NE E L + E I K H +G + V+V LG KG F +G+
Sbjct: 178 KIDYLILNEIEAAMLA---EEQSEDIPMLARKLHDLGARNVVVTLGEKGVYGSFADGQ-- 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
Q +PA +V +DTT AGDTF F +G+ + E + +A AAA+L V GA S
Sbjct: 233 --QRHLPARKVQAVDTTAAGDTFIGGFIGAIAQGRDQFEAIAYAQAAAALSVTRVGAQTS 290
Query: 364 MPDRKSVL 371
+P R V+
Sbjct: 291 IPTRDEVV 298
>gi|23100031|ref|NP_693497.1| ribokinase [Oceanobacillus iheyensis HTE831]
gi|22778262|dbj|BAC14532.1| ribokinase [Oceanobacillus iheyensis HTE831]
Length = 290
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 158/303 (52%), Gaps = 26/303 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS++ D+ V PK GET+ QT+ GGKGANQA ++L +G+VG+
Sbjct: 4 ITVVGSSSIDLVVTAPTRPKAGETIIGDDFQTVPGGKGANQAVAASRLGANVSMIGRVGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I L V ++Y+ V D V +G A + L D NSII V G N P+
Sbjct: 64 DTFGEEILSNLQENKVSVEYVEPVTD--VASGTAHITLAED-DNSIIFVKGANDYVTPD- 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + L+ + A IVL+Q+EIP+ V + + VP++ + AP + +++
Sbjct: 120 YIKKSLDKLINADIVLIQQEIPEETVEFVIETCHTYEVPILLNP----APAREVSNQVIE 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
L+PNE E + G S V+K + ++L+ G G F +GE I
Sbjct: 176 RTTYLTPNEHEFSIMFGNENRS------DVLKRYP---NKLLITEGKNGVRYF-DGEAEI 225
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+IP+ V +DTTGAGDTF ASFA+ EG+S E+ +RFA AAS+ + GA M
Sbjct: 226 ---VIPSYEVVPVDTTGAGDTFNASFAIAIAEGRSLEDAIRFANKAASISITKFGAQGGM 282
Query: 365 PDR 367
P R
Sbjct: 283 PTR 285
>gi|347760821|ref|YP_004868382.1| heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
[Gluconacetobacter xylinus NBRC 3288]
gi|347579791|dbj|BAK84012.1| heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
[Gluconacetobacter xylinus NBRC 3288]
Length = 314
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 154/313 (49%), Gaps = 20/313 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + R + GET+ ++S T GGKGANQA A+L G G+
Sbjct: 8 IAVIGSTNIDFVMHVTRFAQPGETMHVRSSSTGLGGKGANQAMAVARLGQTVALAGWTGQ 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + L GV ++ ++D TG A + + + GQN I++ GG NM+
Sbjct: 68 DMLADMARTTLEAAGVNTRWL--LEDTTCGTGRAFITINAAGQNQILVDGGANMAHTDAS 125
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
L + AG+V++Q E+ ++ + +A+ AR+ +PV+ D AP+P + L
Sbjct: 126 LA-HILPALDGAGLVMMQMEMDPTLMLAIARHARAHAIPVMLD----PAPVPTDGLPEAL 180
Query: 245 LNFIDILSPNESELGRLTGM-PTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
D+++PNE E LTG+ PTD ++ A + H GV ++KLG +G V
Sbjct: 181 CALADLITPNERETAALTGIEPTDETTALAAARI-LHARGVGTAIIKLGHRG----VVYS 235
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
P Q +P RV IDT AGD F A A V G + +R AAA +L GA
Sbjct: 236 APDAQGFVPPFRVHAIDTVAAGDCFNAGLATALVTGHPLGQAVRIAAACGALATTRAGAA 295
Query: 362 PSMPDRKSVLNLL 374
+ P V+ L+
Sbjct: 296 QAAPTMDEVMTLM 308
>gi|197287318|ref|YP_002153190.1| deoxyribokinase [Proteus mirabilis HI4320]
gi|425070106|ref|ZP_18473220.1| ribokinase [Proteus mirabilis WGLW6]
gi|425073951|ref|ZP_18477056.1| ribokinase [Proteus mirabilis WGLW4]
gi|194684805|emb|CAR46880.1| deoxyribokinase [Proteus mirabilis HI4320]
gi|404594604|gb|EKA95173.1| ribokinase [Proteus mirabilis WGLW4]
gi|404595899|gb|EKA96432.1| ribokinase [Proteus mirabilis WGLW6]
Length = 306
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 148/310 (47%), Gaps = 9/310 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+PK GET+ A + GGKGANQA AKL+ + +VG+
Sbjct: 3 IAVIGSNMVDLITYIDRMPKEGETLEAPAFKIGCGGKGANQAVAAAKLNSKVMMLTKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D L G+ Y V K G +G A + + S NSI+IV G N E
Sbjct: 63 DIFADNTIMNLESYGINTRY--VEKVPGTTSGVAPIFVTSQSSNSILIVKGANQHLSAED 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +KK +++LQ EIP + +PV+F+ + + D
Sbjct: 121 I-DRAAVSLKKCRMIVLQLEIPLETVYHAIEFGNKHHIPVLFNPAPASKALDLTIAAQCD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
PNE+EL LTGMP ++ ++I EA + G + ++V LG KG AL+V GE +
Sbjct: 180 FFVPNETELEILTGMPINTLDEIREAAYFLLEKGFKNIIVTLGEKG-ALWVNGE---IEK 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA V +DT+GAGD F F+ +V + EE L A + L V KG S P
Sbjct: 236 YIPAIEVNAVDTSGAGDAFIGCFSHYYVHTGNIEEALNKAVMFSGLSVTGKGTQSSYPSI 295
Query: 368 KSVLNLLQYA 377
+ L A
Sbjct: 296 EEFSEFLSSA 305
>gi|423140126|ref|ZP_17127764.1| putative ribokinase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379052680|gb|EHY70571.1| putative ribokinase [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 412
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 162/314 (51%), Gaps = 19/314 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N DI +DR P+ GE++ ++ + GGKGANQA +K T+FVG+VG
Sbjct: 101 VCILGSFNVDIIANVDRFPQSGESIFSENTVIGPGGKGANQALAVSKCHVKTHFVGKVGN 160
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPE 188
D +L + LS + D + +D TG A++ + QSDG+N I I G N S +
Sbjct: 161 DQFSQLAYEHLSSSDI--DSFMLYQDKQSKTGTALIYVCQSDGENMIAISPGANQSITAD 218
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF- 247
+ E V+ + + L Q E + + AR G V+ D AP ++N
Sbjct: 219 EVEAITSE-VRSSDVFLTQLENNLPATFRAIEIARRCGTKVVLDP----APYSPHVINCL 273
Query: 248 --IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+D L+PNE+E L+G+ A GV QV++ +GAKG AL +G +
Sbjct: 274 QNVDFLTPNETEASLLSGIQVTDISSAKTAAKAIKAKGVGQVIITMGAKG-ALIYDGHEF 332
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+PA A +DTTGAGD F ++ +G+S + ++FA A ASL V+ +GA +
Sbjct: 333 TH---VPALKALCVDTTGAGDAFNGAYTAAMAKGQSILQAVKFACAFASLAVEKEGA-SN 388
Query: 364 MPDRKSVLN-LLQY 376
MP+ K VL L QY
Sbjct: 389 MPEYKDVLTRLAQY 402
>gi|341889026|gb|EGT44961.1| hypothetical protein CAEBREN_01086 [Caenorhabditis brenneri]
Length = 314
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 146/294 (49%), Gaps = 3/294 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS D+ DR P+ GE+V T ++ +GGKGANQA A+L +G VGE
Sbjct: 8 IVVFGSIVQDLVSYTDRFPRPGESVRGNTFKSGSGGKGANQAVAAARLGANVAMIGMVGE 67
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G L GV D + + T A++ + + +N I++ G NM P K
Sbjct: 68 DMFGDSNIKDLKENGV--DTNCIGRTNKTHTATALITVNKEAENCIVVTLGANMEMSP-K 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + +++ + IV+ Q EI + N + + AR GV + DA + + +L+ +D
Sbjct: 125 IAETNSSIIENSKIVMCQGEIDEKGNRKAFEIARKNGVTTFLNPAPGDANMDKSILDLVD 184
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ NE+E +TG+P ++ E +A +MG + ++ LG+KG L +G + I
Sbjct: 185 VICTNENEAEFITGIPQNNVEDAEKAARAMVEMGPKYAIITLGSKGVLLASKGVENIDHI 244
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ IDTTGAGD F S A + G S +R AA ASL V G S
Sbjct: 245 EVKKVEAIDTTGAGDCFCGSLAAHLIAGHSMSSSIRSAANIASLSVTRHGTQSS 298
>gi|153011762|ref|YP_001372976.1| ribokinase [Ochrobactrum anthropi ATCC 49188]
gi|151563650|gb|ABS17147.1| ribokinase [Ochrobactrum anthropi ATCC 49188]
Length = 334
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 166/324 (51%), Gaps = 7/324 (2%)
Query: 53 RRDQNPVPKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAA 112
RR K P + + GS N D+ + LP+ G+TV A GGKGANQA
Sbjct: 13 RRSYGAAAKR-WRKPLKIFIFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAV 71
Query: 113 CGAKLSHPTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQ 172
AK+ FVG VG DA G+L + G+ + V+ GV TG A++ ++ GQ
Sbjct: 72 AVAKMGGDVRFVGAVGNDAFGELALKQMQEFGLNTGSVRVID--GVDTGMAIIQVEEAGQ 129
Query: 173 NSIIIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
N+I + G N + W + + +A I LLQRE+P N+ VAKAAR+AG V+ D
Sbjct: 130 NTIAVCAGAN-AHWSAADVNAYTADIARAKITLLQREVPHEANLAVAKAARAAGGSVLLD 188
Query: 233 AGGM-DAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKL 291
+ DA +L++ DI+SPNE+E +TG+ A + G + V+VKL
Sbjct: 189 PAPVGDASRMADLISLSDIISPNETEAAEITGIEPTDLASAEAAARNLLERGPKTVIVKL 248
Query: 292 GAKGSALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAA 351
G++G+ L E +K +V+DT AGD+F FAV F +G+ +C+R+ +AA
Sbjct: 249 GSRGALLVTADE--VKHFAPFKVKVVDTVAAGDSFNGGFAVAFSQGQPLHDCVRYGSAAG 306
Query: 352 SLCVQVKGAIPSMPDRKSVLNLLQ 375
++ V GA + P V LLQ
Sbjct: 307 AIAVTRAGAGAAAPTAGEVAALLQ 330
>gi|414160090|ref|ZP_11416361.1| ribokinase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878740|gb|EKS26610.1| ribokinase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 303
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 161/303 (53%), Gaps = 8/303 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETV-AAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R K GET+ + + GGKGANQA A+++ T F+ +VG
Sbjct: 5 VVILGSTNVDQFLTVERYAKPGETLHVKEGQKKYGGGKGANQAIATARMNADTTFISKVG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D + + G+ +Y + + TG A + + DG N+I + GG NM PE
Sbjct: 65 KDGLADFMFEGFKEAGMNTEY--ITESETADTGQAFITVDKDGSNTIYVYGGANMDITPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ V+K+A V+ Q E+P I+ + AR G+ I + + +P+ELL I
Sbjct: 123 DVAQAE-AVIKEADYVVAQLEVPIPAIIRAFEIARKHGITTILNPAPA-SELPEELLGLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D++ PNE E L+G+P + +++ +G++ VL+ +GA+G+ V+G + +
Sbjct: 181 DVIIPNEFEAEILSGIPVTDEKSMAQNADYFLSLGIKVVLITIGAQGTYYAVKGNSGLVK 240
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGF-VEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ V+DTT AGDTF +F F V+ + E + FA AAS VQ GA S+P
Sbjct: 241 AY--KVDVVDTTAAGDTFIGAFVSAFDVKQMNLETAIDFANKAASYTVQKAGAQISIPFA 298
Query: 368 KSV 370
K +
Sbjct: 299 KDI 301
>gi|262384597|ref|ZP_06077731.1| ribokinase [Bacteroides sp. 2_1_33B]
gi|298375134|ref|ZP_06985091.1| ribokinase [Bacteroides sp. 3_1_19]
gi|262293890|gb|EEY81824.1| ribokinase [Bacteroides sp. 2_1_33B]
gi|298267634|gb|EFI09290.1| ribokinase [Bacteroides sp. 3_1_19]
Length = 309
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ ++ + LP+ GETV T GGKGANQA A+L F+ + G
Sbjct: 11 ILVVGSSNTDMVIKTNHLPRPGETVLGGTFFMNPGGKGANQAVAIARLGGEVSFICKTGS 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y + D P+G A++ + + +N I++ G N + P
Sbjct: 71 DIFGHQSQQLFEEEGIDTSY--IFSDSKNPSGVALITVDAHAENCIVVASGANANLLPTD 128
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ E +++A ++L+Q EIP D+V VAK A VI + P+ LL +
Sbjct: 129 LAKAE-EAIEQAELILMQLEIPMDTVEF-VAKTAWKKNKRVILNPAPAQ-PLSAALLRHL 185
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
+++PNE+E ++G+ +A +MGVQ V++ LG+KG+ ++ +
Sbjct: 186 YMITPNETEAEMISGVKITDEVSAEKAARVIMEMGVQNVIITLGSKGALIYCDS----MV 241
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGD F + V EG+ E +RFA A+++ V GA S P
Sbjct: 242 DMVPAIKVEAVDTTAAGDIFNGALTVALAEGRDLREAVRFACKASAISVTRVGAQSSAPY 301
Query: 367 RKSV 370
R V
Sbjct: 302 RNEV 305
>gi|384549161|ref|YP_005738413.1| putative ribokinase [Staphylococcus aureus subsp. aureus JKD6159]
gi|302332010|gb|ADL22203.1| putative ribokinase [Staphylococcus aureus subsp. aureus JKD6159]
Length = 304
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A+S GV + + A +P ELL+ I
Sbjct: 123 DIINAK-DAIINADFVVAQLEVPIPAIIAAFEIAKSHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAINFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|257886310|ref|ZP_05665963.1| carbohydrate kinase [Enterococcus faecium 1,231,501]
gi|257822166|gb|EEV49296.1| carbohydrate kinase [Enterococcus faecium 1,231,501]
Length = 305
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 159/304 (52%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + + +PK GET+ A GGKGANQA + T F+G VG
Sbjct: 4 VTVIGSINMDTTLRLTNMPKPGETMHAHEIFHAGGGKGANQAVAAKRSGARTSFIGGVGA 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G+ + D L+ + + ++D TG A++M+ + G+NSI+I G N + + E+
Sbjct: 64 DSEGQQLLDLLTKENIDTSGIAEIQDA--TTGQAMIMVDAVGENSILIHAGAN-NAFHEQ 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
++ +++ + ++ Q E I A+ AG I + IP ELL D
Sbjct: 121 EVLKNKQLITNSDFIIAQFESSLDATILAFSIAKDAGKTTILNPAPARETIPTELLEKTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNE+E +TG+ + + A K H++G+ V++ LG+ G+ F EK +
Sbjct: 181 IIIPNETETEIITGIRVTDHNSLVAAAEKLHELGIGTVIITLGSAGA--FYHTEK--EHG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S +E + + A+S+ VQ GA PS+P
Sbjct: 237 IVPAFKVDAVDTTAAGDTFIGALSSTLQPDLSNLKEAILYGNLASSVAVQSYGAQPSIPY 296
Query: 367 RKSV 370
R+++
Sbjct: 297 REAL 300
>gi|270290067|ref|ZP_06196293.1| ribokinase [Pediococcus acidilactici 7_4]
gi|304385680|ref|ZP_07368024.1| ribokinase [Pediococcus acidilactici DSM 20284]
gi|418069951|ref|ZP_12707228.1| ribokinase family sugar kinase [Pediococcus acidilactici MA18/5M]
gi|270281604|gb|EFA27436.1| ribokinase [Pediococcus acidilactici 7_4]
gi|304328184|gb|EFL95406.1| ribokinase [Pediococcus acidilactici DSM 20284]
gi|357536482|gb|EHJ20513.1| ribokinase family sugar kinase [Pediococcus acidilactici MA18/5M]
Length = 301
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 154/304 (50%), Gaps = 10/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D + + ++PK GET+ K + GGKGANQA + T F+G VG
Sbjct: 4 VTIIGSINLDRTIRVKQMPKPGETMHTKEIFSAGGGKGANQAVAAKRSEAKTNFIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + D L + L + + + TG A +++ G+N I++ G NM+ P+
Sbjct: 64 DDAGRAMLDLLEHEDIDLSGVTTLDNQA--TGQAYIVVDDAGENEIMLHAGANMAFTPDY 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ +V+K + V+ Q E + + A AGV I + +P +LL D
Sbjct: 122 VASK-ADVIKNSDFVIAQFETGLEATTKAFEIAHEAGVKTILNPAPAIEKVPDDLLAVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + +A H G++ VL+ +G+KG+ V GE
Sbjct: 181 MIIPNETETEILTGIEVTDEASMVKAAKALHDQGIKAVLITIGSKGTFYSVNGE----TG 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMPD 366
I+PA +V +DTT AGDTF + + S ++ + + A+SL VQ GA PS+P
Sbjct: 237 IVPAFKVKAVDTTSAGDTFIGAMSTVLNPDFSNLKDAILYGNKASSLTVQRFGAQPSIPY 296
Query: 367 RKSV 370
+K +
Sbjct: 297 KKEL 300
>gi|296110798|ref|YP_003621179.1| ribokinase [Leuconostoc kimchii IMSNU 11154]
gi|339491967|ref|YP_004706472.1| ribokinase [Leuconostoc sp. C2]
gi|295832329|gb|ADG40210.1| ribokinase [Leuconostoc kimchii IMSNU 11154]
gi|338853639|gb|AEJ31849.1| ribokinase [Leuconostoc sp. C2]
Length = 312
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 158/314 (50%), Gaps = 15/314 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV+GS N D IDRLP+ GET+A + + GGKGANQA A+ F+G VG
Sbjct: 5 VVVIGSLNMDTIQMIDRLPQRGETLAVRNQASTFGGKGANQAVAAARQGADVTFIGAVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ L G++ DY+ PTG A +ML+ DG N+I++ GG NMS +
Sbjct: 65 DDRGRAFKQLLVDEGIKTDYIFTKNQ---PTGSATIMLEDDGHNTIMVFGGANMSLSADD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +V+ Q E+P + + + AR AGV I + + + + E++ D
Sbjct: 122 IS-QARAAIVAADVVVAQLEVPMAAVAKGFEIAREAGVLTILNPAPVTSHLTDEIMLTTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQ-ISEAVVKCHKMGVQQVLVKLGAKGSALFV---EGEKP 305
+L PNE+E L + + + Q + + +K ++G+ +V LG G V G+ P
Sbjct: 181 LLIPNETEAAALADVQSTTDSQALEQLTLKLRRLGMAHTIVTLGGDGVYYHVNDQSGQVP 240
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSM 364
I + +DTT AGDTF + A E ++ + A+SL V +GA+ S+
Sbjct: 241 IFK-----VDAVDTTAAGDTFIGTVAANITKEMTDLPTIIKRSCFASSLTVSRRGALVSI 295
Query: 365 PDRKSV-LNLLQYA 377
P + V L QY+
Sbjct: 296 PTKAEVDAGLQQYS 309
>gi|262038992|ref|ZP_06012327.1| ribokinase [Leptotrichia goodfellowii F0264]
gi|261746984|gb|EEY34488.1| ribokinase [Leptotrichia goodfellowii F0264]
Length = 308
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 16/310 (5%)
Query: 71 VVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGED 130
+V+GS N D+ +++ LPK+GET+ + GGKGANQA +KL T +G VG D
Sbjct: 5 LVIGSLNMDMTAKVENLPKLGETIFSNEFYESCGGKGANQAVAMSKLGMTTEMIGMVGND 64
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
+ G + + L V+ D N++K + TG A++ + G NSII++ G N E
Sbjct: 65 SQGDRLINNLIKHNVKAD--NIIKSNDL-TGRAIITVDKRGNNSIIVIPGCNFKITEEDI 121
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN---- 246
++ +EV+ + I++LQ EIP V A+ G I + P P LN
Sbjct: 122 QNK-IEVIAENDIIVLQNEIPSEVVEYTLVKAKELGKTTILN------PAPARKLNDKIY 174
Query: 247 -FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
ID L NE+E+ + + I + K + ++ +++ LG GS LF E +
Sbjct: 175 KNIDYLILNETEMEEIFDIGIHDKVYIGQIFHKKKECNIKNIILTLGENGSVLFDENDN- 233
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+K+ +DTT AGD+F +FA+ E + +E +++A A +++ V +GA S+P
Sbjct: 234 VKKYDAYEVEAVDTTAAGDSFIGAFALKICETNNPDEAIKYATATSAIVVTRQGAQDSIP 293
Query: 366 DRKSVLNLLQ 375
+ + ++
Sbjct: 294 SPEEIEEFIE 303
>gi|387825423|ref|YP_005824894.1| Ribokinase [Francisella cf. novicida 3523]
gi|332184889|gb|AEE27143.1| Ribokinase [Francisella cf. novicida 3523]
Length = 306
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 152/297 (51%), Gaps = 5/297 (1%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GSAN D+ V++D+L + G+T+ ++ + GGKGANQA +L F+ +G
Sbjct: 2 SVVVIGSANRDLVVKVDQLAQKGQTIISQNYEEFCGGKGANQAVAARRLGENVTFITNLG 61
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+D+ G + + G LD + +D TG A + + + GQN I +V G N +
Sbjct: 62 KDSFGDRLLEFYKKEG--LDSSTINQDEASNTGLAFICVDNQGQNIINVVMGANAK-LDQ 118
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ D+ + +++A I+L Q E P +A ++ A + +PQ+LL +
Sbjct: 119 QILDKHNQKIQQANIILTQLETPLETIEYLANKITEEQTFILNPAPARE--LPQQLLKKV 176
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DIL+PNE+E L+G+ E +A H+ GV V++ LG +G+ L + K
Sbjct: 177 DILTPNETEASILSGIQVKDLETAKQAAKILHEQGVAIVIITLGEQGALLSKNNRQEQKL 236
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
V+DTT AGDTF A +G S E+ + A AA+L V V+GA S P
Sbjct: 237 FATKKVDVVDTTAAGDTFNGVLAFCLDKGLSIEQSIEIANTAAALAVTVEGAEDSAP 293
>gi|227505436|ref|ZP_03935485.1| possible ribokinase [Corynebacterium striatum ATCC 6940]
gi|227197979|gb|EEI78027.1| possible ribokinase [Corynebacterium striatum ATCC 6940]
Length = 306
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 156/309 (50%), Gaps = 14/309 (4%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P VVVGS N D+ + ++R P GET+ + LAGGKGANQA A+ FVG V
Sbjct: 6 PHCVVVGSINADLMISVERHPTPGETLIGSGGEVLAGGKGANQAVAAARQGASVSFVGAV 65
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA + L GV L ++ K TG AV+ + +DG+N+I++V G N
Sbjct: 66 GDDAYAGPAMELLEASGVDLSHVEHFK--ATTTGLAVIKVAADGENTIVVVPGANARVDA 123
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E F + + KA +VLLQ EIP + + + AR+ G V+ + + Q LL
Sbjct: 124 E-FVQQHARALHKADMVLLQGEIPAAGFQKAVELARAVGARVVVNLAPVVDVDKQALLQ- 181
Query: 248 IDILSPNESELG---RLTGMPTDSYEQISEAVVKCHKM-GVQQVLVKLGAKGSALF-VEG 302
D L NE E G + G T S E E +V+C + G V++ LGA+G+ + EG
Sbjct: 182 ADPLVVNEHEAGLVLKQLGAQTPSDE--PEELVECLRAEGFAAVVLTLGARGAIVADAEG 239
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
PI P + +DTTGAGD FT + ++G + + AA + +GA P
Sbjct: 240 TTPIP---TPQIKAVDTTGAGDAFTGALVAKLLQGATLSDAAHHAARVGAFAALSRGAQP 296
Query: 363 SMPDRKSVL 371
S PD K+ L
Sbjct: 297 SYPDLKAQL 305
>gi|317121091|ref|YP_004101094.1| ribokinase [Thermaerobacter marianensis DSM 12885]
gi|315591071|gb|ADU50367.1| ribokinase [Thermaerobacter marianensis DSM 12885]
Length = 314
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 164/318 (51%), Gaps = 17/318 (5%)
Query: 60 PKNPINTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSH 119
P+ P+ T VVGS + + DR P GETV + GGKG+NQA A+L
Sbjct: 7 PRRPVVT-----VVGSFAVGLTLRADRFPVAGETVVGRDFDRGPGGKGSNQAVQAARLGA 61
Query: 120 PTYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVG 179
FVG VG+D + + GV Y+ VV G TG ++L + G+N I++
Sbjct: 62 DVEFVGLVGDDDLAAMAWELYRREGVGTRYLGVVP--GRNTGVGFIVLNAQGENFIVLDP 119
Query: 180 GTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP 239
G N P + E + ++ +VL Q EIP + + AR AGV I + P
Sbjct: 120 GANGCLGPAHV-ERARERLAQSHVVLTQLEIPVEAAVHALRLARDAGVTAILNPAPAR-P 177
Query: 240 IPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKM---GVQQVLVKLGAKGS 296
+P E L D+++PNE+EL L G+P D ++++ CH++ GV+ V++ GA+G
Sbjct: 178 LPLEHLALADVITPNETELRILLGLPPDDP---ADSLDLCHRLLAAGVRTVVLTRGARG- 233
Query: 297 ALFVEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQ 356
L VE ++ P A V+DTTGAGD F+A+FAV EG+ E R AAAA +L
Sbjct: 234 VLVVEPGGVVEIPAFPVA-VVDTTGAGDAFSATFAVSLAEGRPLAEAARRAAAAGALACT 292
Query: 357 VKGAIPSMPDRKSVLNLL 374
G IP++P R + LL
Sbjct: 293 ALGVIPALPRRDQLDALL 310
>gi|296389644|ref|ZP_06879119.1| ribokinase [Pseudomonas aeruginosa PAb1]
Length = 258
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 9/259 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ T+ GGKGANQA A+L +G +G+
Sbjct: 5 VLVVGSLNMDLVVRAPRLPRGGETLAGQSFTTIPGGKGANQAVAAARLGAGVAMIGCLGD 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G + AL G+ D V + G +G A++++ QN+I+IV G+N P
Sbjct: 65 DAYGDQLYRALQAEGI--DCQGVERVAGESSGVALIVVDDSSQNAIVIVAGSNGHLSPAV 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ ++++A +V+ Q E P V + A + G VI + +P + L +D
Sbjct: 123 LARHE-HLLEQAQVVVCQLESPLETVGHVLRRAHALGKTVILNPAPATRDVPADWLPLVD 181
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE+E L +P DS E A + +MG +V+V LGA+G+ L EG +
Sbjct: 182 YLVPNETESELLCRLPVDSLESAGRAAERLREMGAGRVIVTLGAQGALLVGEG----RVE 237
Query: 310 IIPAARV--IDTTGAGDTF 326
P ARV +DTT AGDTF
Sbjct: 238 HFPVARVKALDTTAAGDTF 256
>gi|301309208|ref|ZP_07215152.1| ribokinase [Bacteroides sp. 20_3]
gi|423338940|ref|ZP_17316682.1| ribokinase [Parabacteroides distasonis CL09T03C24]
gi|300832890|gb|EFK63516.1| ribokinase [Bacteroides sp. 20_3]
gi|409233065|gb|EKN25906.1| ribokinase [Parabacteroides distasonis CL09T03C24]
Length = 309
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 12/304 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ ++ + LP+ GETV T GGKGANQA A+L F+ + G
Sbjct: 11 ILVVGSSNTDMVIKTNHLPRPGETVLGGTFFMNPGGKGANQAVAIARLGGEVSFICKTGS 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y + D P+G A++ + + +N I++ G N + P
Sbjct: 71 DIFGHQSQQLFEEEGIDTSY--IFSDSKNPSGVALITVDAHAENCIVVASGANANLQPTD 128
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ E +++A ++L+Q EIP D+V VAK A VI + P+ LL +
Sbjct: 129 LAKAE-EAIEQAELILMQLEIPMDTVEF-VAKTAWKKNKRVILNPAPAQ-PLSAALLRHL 185
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
+++PNE+E ++G+ +A +MGVQ V++ LG+KG+ ++ +
Sbjct: 186 YMITPNETEAEMISGVKITDEVSAEKAARVIMEMGVQNVIITLGSKGALIYCDS----MV 241
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
++PA +V +DTT AGD F + V EG+ E +RFA A+++ V GA S P
Sbjct: 242 DMVPAIKVEAVDTTAAGDIFNGALTVALAEGRDLREAVRFACKASAISVTRVGAQSSAPY 301
Query: 367 RKSV 370
R V
Sbjct: 302 RNEV 305
>gi|448239502|ref|YP_007403560.1| ribokinase [Geobacillus sp. GHH01]
gi|445208344|gb|AGE23809.1| ribokinase [Geobacillus sp. GHH01]
Length = 297
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 157/308 (50%), Gaps = 22/308 (7%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D+ R P GET+ + T GGKGANQA A+L +G V
Sbjct: 4 PSITVIGSLNMDLVTVAARFPNQGETILGEQFLTTPGGKGANQAVAAARLGADVRMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+ + +L GV +D + V TG A + + S+ N II+V G N + P
Sbjct: 64 GDDAFGQELIRSLQNEGVSVDCVKSVTHQ--RTGIAAITI-SERDNRIIVVPGANHALTP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E D V+ ++ + LLQ EIP V + A GV VI + P+P +L
Sbjct: 121 EDL-DPYESVIAESDVCLLQLEIPLPVVERAVSIAHRHGVRVIVNPAPAQ-PLPLVVLEQ 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG-EKPI 306
L+PNE E G L ++++ E + V Q++V GAKG ++ +G E+ I
Sbjct: 179 ASFLTPNEHERGIL-------FDKMDE------ESFVDQLIVTEGAKGVRIWQDGQERLI 225
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ +P V+DTTGAGDTF + AV EGK E RFA AAA+L V GA MP
Sbjct: 226 RSFHVP---VVDTTGAGDTFNGALAVALAEGKPLHEACRFANAAAALSVTKLGAQAGMPR 282
Query: 367 RKSVLNLL 374
R+ V + L
Sbjct: 283 REEVESFL 290
>gi|239617001|ref|YP_002940323.1| ribokinase [Kosmotoga olearia TBF 19.5.1]
gi|239505832|gb|ACR79319.1| ribokinase [Kosmotoga olearia TBF 19.5.1]
Length = 300
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 156/306 (50%), Gaps = 23/306 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ + +D + GET T GGKGANQA KL YF+ VG
Sbjct: 2 IAVVGSNNVDVVLTVDHFTRAGETQKCTTLNYFPGGKGANQAVAAKKLGAEVYFLTCVGN 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D N + ++L G+ +K P G A++ +++ G N I+I G N + E
Sbjct: 62 DGNAQFAVESLKKAGLE----KGIKKVDSPNGMAIIEVEASGNNRIVIYPGAN-AYLTES 116
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ + + KA ++LLQ EIP S + A+ AG VIFD AP I +E+
Sbjct: 117 VVESARDELLKADVLLLQNEIPFSATLHAARLFHEAGKLVIFDP----APSKDITKEIFQ 172
Query: 247 FIDILSPNESELGRLTG-MPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVE-GEK 304
++DI++PNESE L G +P + + + K+G + VL+KLG KG+ E GE
Sbjct: 173 YVDIITPNESEAVSLVGDLPPEML------IKELKKLGCKNVLLKLGEKGTIFSGELGEF 226
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ + A +DTT AGDTF + AV G + ++FA+AAA++ V GA PS
Sbjct: 227 SLGAFKVDA---VDTTAAGDTFNGALAVAIENGLDMIDAVKFASAAAAISVTRMGAQPSC 283
Query: 365 PDRKSV 370
P + V
Sbjct: 284 PTLEEV 289
>gi|227356996|ref|ZP_03841368.1| deoxyribokinase [Proteus mirabilis ATCC 29906]
gi|227162874|gb|EEI47833.1| deoxyribokinase [Proteus mirabilis ATCC 29906]
Length = 306
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 148/310 (47%), Gaps = 9/310 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+PK GET+ A + GGKGANQA AKL+ + +VG+
Sbjct: 3 IAVIGSNMVDLITYIDRMPKEGETLEAPAFKIGCGGKGANQAVAAAKLNSKVMMLTKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D L G+ Y V K G +G A + + S NSI+IV G N E
Sbjct: 63 DIFADNTIMNLESYGINTRY--VEKVPGTTSGVAPIFVTSQSSNSILIVKGANQHLSAED 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +KK +++LQ EIP + +PV+F+ + + D
Sbjct: 121 I-DRAAVSLKKCRMIVLQLEIPLETVYHAIEFGNKHHIPVLFNPAPASKALDITIAAQCD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
PNE+EL LTGMP ++ ++I EA + G + ++V LG KG AL+V GE +
Sbjct: 180 FFVPNETELEILTGMPINTLDEIREAAYFLLEKGFKNIIVTLGEKG-ALWVNGE---IEK 235
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IPA V +DT+GAGD F F+ +V + EE L A + L V KG S P
Sbjct: 236 YIPAIEVNAVDTSGAGDAFIGCFSHYYVHTGNIEEALNKAVMFSGLSVTGKGTQSSYPSI 295
Query: 368 KSVLNLLQYA 377
+ L A
Sbjct: 296 EEFSEFLSSA 305
>gi|423718475|ref|ZP_17692657.1| ribokinase [Geobacillus thermoglucosidans TNO-09.020]
gi|383365010|gb|EID42313.1| ribokinase [Geobacillus thermoglucosidans TNO-09.020]
Length = 298
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 156/312 (50%), Gaps = 24/312 (7%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVGS N D+ R P GET+ + + GGKGANQA A+L + +G
Sbjct: 2 TKPVITVVGSINMDLVTIASRFPSQGETILGEEFHLIPGGKGANQAVAAARLGAEVHMIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG D G + +L GV +D + V G TG A + + S+ N II+V G N +
Sbjct: 62 AVGTDPFGNELLRSLEREGVHIDNVKPVTHKG--TGIASITI-SEQDNRIIVVPGANHAL 118
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
PE D E++ K+ + +LQ EIP SV + A+ V VI + P+PQ+L+
Sbjct: 119 RPEDI-DRYEEIIAKSDVCVLQLEIPLSVVERAVFLAKKHHVRVILNPAPAQ-PLPQKLI 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D L+PNE E + +EQ+ V +V+V GA+G + +G
Sbjct: 177 EQADFLTPNEHEREII-------FEQVDVDVF------ADKVIVTEGARGVTIRKDG--- 220
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
KQ IP V+DTTGAGDTF + AV +G S E+ RFA AAA+L V GA
Sbjct: 221 -KQVHIPGFCVPVVDTTGAGDTFNGALAVALSKGMSLEDACRFANAAAALSVTKLGAQGG 279
Query: 364 MPDRKSVLNLLQ 375
MP + V LQ
Sbjct: 280 MPTEEEVKKFLQ 291
>gi|386829946|ref|YP_006236600.1| putative ribokinase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|417798310|ref|ZP_12445484.1| ribokinase [Staphylococcus aureus subsp. aureus 21310]
gi|418656442|ref|ZP_13218254.1| ribokinase [Staphylococcus aureus subsp. aureus IS-105]
gi|334276424|gb|EGL94686.1| ribokinase [Staphylococcus aureus subsp. aureus 21310]
gi|375033665|gb|EHS26849.1| ribokinase [Staphylococcus aureus subsp. aureus IS-105]
gi|385195338|emb|CCG14946.1| putative ribokinase [Staphylococcus aureus subsp. aureus HO 5096
0412]
Length = 304
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A+S GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKSHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|315650454|ref|ZP_07903524.1| ribokinase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315487250|gb|EFU77562.1| ribokinase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 297
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 155/301 (51%), Gaps = 13/301 (4%)
Query: 74 GSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANG 133
GS N D ++D + GET+++ GGKG NQ+ AK Y G VG A+G
Sbjct: 7 GSLNLDYVYDVDHFVREGETLSSTDMNVFCGGKGLNQSVALAKAGVKVYHAGAVGS-ADG 65
Query: 134 KLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDE 193
+++TDALS GV + Y ++ +P+GHA++ G N I++ GG N + E F +
Sbjct: 66 EMLTDALSSVGVDISY---IRRYDMPSGHAIIQKNKSGNNCILLYGGANQNIDKE-FIKD 121
Query: 194 DLEVVKKAGIVLLQREIPDSVNIQ-VAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILS 252
L+ K I+LLQ EI N+ + A + G+ ++ + ++ I + L I L
Sbjct: 122 VLKDFDKGDILLLQNEIS---NLSFIVDEAFAKGIRIVLNPSPINESIFECDLKKISYLI 178
Query: 253 PNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIP 312
NE E + + S + + E + K +++ LG +GS ++V+ I Q I P
Sbjct: 179 LNEIEAADILSVEYKSKDDLIEKLTKSFPD--TGLVLTLGEEGS-VYVDKNCKIYQGIYP 235
Query: 313 AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVLN 372
+V+DTT AGDTFT F G VEG + LR A+ AAS+ V KGA PS+P K V
Sbjct: 236 T-KVVDTTAAGDTFTGYFIAGLVEGMDIKSALRQASKAASITVSKKGASPSIPFVKEVFT 294
Query: 373 L 373
+
Sbjct: 295 V 295
>gi|37524091|ref|NP_927435.1| ribokinase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36783514|emb|CAE12354.1| ribokinase [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 309
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 153/306 (50%), Gaps = 15/306 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + P+ GETV + Q GGKGANQA + F+ VGE
Sbjct: 6 LAVLGSINADHILNLKSFPRPGETVIGEQYQVAFGGKGANQAVAAGRSGADITFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G I L+ + + V+K G TG A++ + G+N I I G N + PE
Sbjct: 66 DDIGFRICQQLAKDNINTSGIEVIK--GETTGVALIFVNHQGENIIGINAGANAALTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
F ++++A +L+Q E P A A+ VI + AP + +LL+
Sbjct: 124 FYRYQ-NIIEEADALLIQLESPLETVQLAATIAKQNNTKVILNP----APARKLSDQLLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E LTG+ ++ A H G++ V++ LG++G L G+K
Sbjct: 179 LVDIITPNETEAEYLTGIKVENDSDAENAAQILHGKGIETVIITLGSRGVWLSESGQKG- 237
Query: 307 KQSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I+P + V+DT AGDTF + +E KS +RFA +AA++ V +GA PS+
Sbjct: 238 --KIVPGFKVNVVDTVAAGDTFNGALVTALLERKSMLSAIRFAHSAAAIAVTRQGAQPSV 295
Query: 365 PDRKSV 370
P R +
Sbjct: 296 PWRNEI 301
>gi|402566585|ref|YP_006615930.1| ribokinase [Burkholderia cepacia GG4]
gi|402247782|gb|AFQ48236.1| ribokinase [Burkholderia cepacia GG4]
Length = 309
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 134/296 (45%), Gaps = 4/296 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAIAAARLGAQVAMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D + TG A++++ QN+I+IV G N +
Sbjct: 71 DAHGAALRAGLEAEGI--DCARLATSATASTGVALIVVDDASQNTIVIVAGANGDVTTDT 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D + +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 VARHD-AALAATDVLICQLETPPDAVFAALSAGRRHGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+P A G + VL+ LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTGLPVRDPADAETAARALQAAGARNVLITLGARG-VLALTADGAARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P +DTT AGDTF FA G + +RFA AA+L V GA PS+P
Sbjct: 247 PAPVVPAVDTTAAGDTFIGGFAARLAAGADVDTAIRFAQRAAALSVTRAGAQPSIP 302
>gi|291286158|ref|YP_003502974.1| ribokinase [Denitrovibrio acetiphilus DSM 12809]
gi|290883318|gb|ADD67018.1| ribokinase [Denitrovibrio acetiphilus DSM 12809]
Length = 302
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 151/304 (49%), Gaps = 10/304 (3%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V GS N D+ ++DR P+ GET+ + T GGKGANQA A+L VG+ G D
Sbjct: 6 VTGSINMDLVTQVDRFPRPGETINGLSFATFPGGKGANQAVALARLGAKVSMVGKTGNDI 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
+ GV + V TG AV+ + S G+NSIIIV G N +
Sbjct: 66 YAGEYMQYFTNAGVNTE---CVSQEDTSTGIAVISVDSSGENSIIIVAGANGKV-NSLYV 121
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
E +++ ++ +L+Q EIP IQ A A G VI D A +P LL +DI+
Sbjct: 122 SEKQDIISRSDFLLIQLEIPMEAVIQAADIAVKNGTKVILDPAPA-ADVPDSLLCNVDII 180
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSII 311
+PNE+E LTG+ ++ +A K + G + ++K GA+G+ ++ GE
Sbjct: 181 TPNETEAEVLTGIKPETDADFRKAGEKLIERGAKNAVMKAGARGAYIYTNGELIHIDGF- 239
Query: 312 PAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP---DRK 368
V DTT AGDTF A A +G E +RFA AAA++ +GA MP + K
Sbjct: 240 -KVEVKDTTAAGDTFNAGLAYALGKGLLMREAVRFANAAAAISTTKQGAQSGMPVIAEVK 298
Query: 369 SVLN 372
++LN
Sbjct: 299 TLLN 302
>gi|429737292|ref|ZP_19271161.1| ribokinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429153038|gb|EKX95836.1| ribokinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 316
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 148/305 (48%), Gaps = 14/305 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ + R+P+ GET+A K GGKGANQA A++ + VG
Sbjct: 2 IAVIGSNNMDLISYVQRMPEPGETLAMKDFSIAYGGKGANQAVAAARMGADILMLTAVGT 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN--MSCWP 187
D G+ I L G+R DY +K P G A + + QN I+I G N ++
Sbjct: 62 DVFGQDIDVHLRAEGIRGDY---IKHVDAPNGTASIWVDDTAQNRILIHKGANALLNVQD 118
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ EDL +K +++LQ E+ V R GVP++ + + ++
Sbjct: 119 IERAAEDL---RKCSMIILQLEVDYDVVYHAFSFGREHGVPILLNPAPASTELDMARISC 175
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
D PNE+EL LT D+ + I EA G++ V+V LG+KG G
Sbjct: 176 CDFFMPNETELEILTNHVVDTMDAIQEAGAILLAQGMKNVIVTLGSKGVLWLHAG----G 231
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+IPA V +DTTGAGD+F FA + K+ + LR+A A A+L VQ +GA S P
Sbjct: 232 AELIPAFVVEAVDTTGAGDSFIGCFAAVYEREKNVRDALRWANAFAALGVQKRGAQSSYP 291
Query: 366 DRKSV 370
R V
Sbjct: 292 TRGDV 296
>gi|269122219|ref|YP_003310396.1| ribokinase [Sebaldella termitidis ATCC 33386]
gi|268616097|gb|ACZ10465.1| ribokinase [Sebaldella termitidis ATCC 33386]
Length = 304
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 163/302 (53%), Gaps = 9/302 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ V++++LPK+GET+ +T GGKGANQA AKL +G++G+
Sbjct: 4 ILVIGSLNMDLVVKVEKLPKLGETILGETLYENPGGKGANQAVAAAKLGGNVSMIGKLGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L ++ + + D TG AV+ + S G NSI+++ G+N+ E
Sbjct: 64 DNYGEQLLLNLKSNNIKTEGIIRCDD---ITGTAVIEVDSKGNNSIVVIPGSNLKLSKED 120
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
D +++ KA IV+LQ+EIP ++V + AA + ++ A + I +++L
Sbjct: 121 L-DSASDLIDKADIVILQQEIPMETVEYALELAAEKGKITILNPAPAV--KISEKVLAAT 177
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
D L NE+EL ++G + + + + G + +++ LG KG ++ EGE+ IK+
Sbjct: 178 DFLILNETELEIISGKESIPETEYIYTINELRNKGAKNIILTLGEKG-GMYTEGEE-IKE 235
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+DTT AGD+F +FA+ E + L FA ++L V GA S+P ++
Sbjct: 236 YKALKVTAVDTTAAGDSFIGAFALKLAENAGVSDALEFAVGVSALTVTRSGAQQSLPTQE 295
Query: 369 SV 370
+
Sbjct: 296 EL 297
>gi|282915591|ref|ZP_06323363.1| ribokinase [Staphylococcus aureus subsp. aureus D139]
gi|283768002|ref|ZP_06340917.1| ribokinase [Staphylococcus aureus subsp. aureus H19]
gi|282320694|gb|EFB51032.1| ribokinase [Staphylococcus aureus subsp. aureus D139]
gi|283461881|gb|EFC08965.1| ribokinase [Staphylococcus aureus subsp. aureus H19]
Length = 304
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A+S GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKSHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|238753958|ref|ZP_04615317.1| Ribokinase [Yersinia ruckeri ATCC 29473]
gi|238707710|gb|EEQ00069.1| Ribokinase [Yersinia ruckeri ATCC 29473]
Length = 308
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 156/311 (50%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I + P+ GETV K GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNIQQFPRPGETVIGKQYNVAFGGKGANQAVAAGRSGADIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L+ R+D V G TG A++ + +G+N I I G N + P+
Sbjct: 66 DDIGERVRQQLATD--RIDTGPVEAIAGETTGVALIFVNGEGENVIGINAGANAAVTPDY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V+ A +L+Q E P I AK AR VI + AP +P ELL
Sbjct: 124 LQRYQQKVI-DAQALLMQLESPLETVIAAAKLARENQTQVILNP----APARELPDELLQ 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + A H G+ V++ LG++G L +G+
Sbjct: 179 LVDMITPNETEAERLTGIHIKNDNDADRAAKILHDKGITTVIITLGSRGVWLSEQGQG-- 236
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++P +V +DT AGDTF + +EG++ +RFA AAA++ V GA PS+
Sbjct: 237 --KLMPGFKVDAVDTIAAGDTFNGALLTALLEGQTMATAVRFAHAAAAIAVTRSGAQPSI 294
Query: 365 PDRKSVLNLLQ 375
P R + LQ
Sbjct: 295 PWRAEIDTFLQ 305
>gi|418562911|ref|ZP_13127360.1| ribokinase [Staphylococcus aureus subsp. aureus 21262]
gi|371972553|gb|EHO89928.1| ribokinase [Staphylococcus aureus subsp. aureus 21262]
Length = 304
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A+S GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKSHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|116334023|ref|YP_795550.1| ribokinase family sugar kinase [Lactobacillus brevis ATCC 367]
gi|116099370|gb|ABJ64519.1| Sugar kinase, ribokinase family [Lactobacillus brevis ATCC 367]
Length = 306
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 156/299 (52%), Gaps = 11/299 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D + I R+P+ GET++ + + AGGKGANQA A+ T F+G+VG
Sbjct: 5 VTVLGSLNVDTTLRIARMPQPGETLSTENKSSAAGGKGANQAVAAARAGAETSFIGKVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + ++L +D ++ D V TG A ++L GQNSI++ GG+N E+
Sbjct: 65 DDAGRFMVESLDND--HIDTHAIITDPVVGTGSAFILLDEAGQNSILVYGGSNQQIKAEE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ E+ A ++ Q E P + + K A+ GV I + A I E+L D
Sbjct: 123 VIAREDEIA-NADFLITQFETPQAATLAAFKVAKQHGVTTILNPAPA-AEIDPEILKVTD 180
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
++ PNE+E LTG+ + K +MGV+ +++ +G+KG+ E E
Sbjct: 181 LVIPNETESAELTGIEVTDEASMDANAKKFREMGVKNLIITVGSKGAYYATEQES----G 236
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
+PA +V +DTT AGDTF + + S L FA A+SL VQ GA+PS+P
Sbjct: 237 FVPAFKVKAVDTTAAGDTFIGALSSQLKPDLSNVATALVFAQRASSLTVQGLGAMPSIP 295
>gi|417902602|ref|ZP_12546467.1| ribokinase [Staphylococcus aureus subsp. aureus 21266]
gi|341842578|gb|EGS83813.1| ribokinase [Staphylococcus aureus subsp. aureus 21266]
Length = 304
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 155/300 (51%), Gaps = 12/300 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKSTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQSQHIE 240
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPSMP 365
+ VIDTT AGDTF +F KS++ + + F A+SL VQ GA S+P
Sbjct: 241 AY--KVNVIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQASIP 296
>gi|323702357|ref|ZP_08114022.1| ribokinase [Desulfotomaculum nigrificans DSM 574]
gi|333924086|ref|YP_004497666.1| ribokinase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532663|gb|EGB22537.1| ribokinase [Desulfotomaculum nigrificans DSM 574]
gi|333749647|gb|AEF94754.1| ribokinase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 301
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 152/309 (49%), Gaps = 18/309 (5%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P ++V+GS N D+ DR+P VGETV + T+ GGKGANQA KL +G V
Sbjct: 4 PHVLVIGSLNMDLVSYSDRIPHVGETVLGQRFATVPGGKGANQAMAAVKLGAKVTMLGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D+ G + L GV D V++ G TG A++ + ++G N I++V G N P
Sbjct: 64 GNDSYGDQLLSHLKQHGV--DTTRVLRTGST-TGVALINVDANGNNQIVVVPGANYDLGP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ +V A +V+LQ EIP Q + A PVI + P+P + LN
Sbjct: 121 AELVRRQ-QVFADADVVVLQLEIPLPTVGQAIELAHKYHKPVILNPAPAQ-PLPDDWLNQ 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
+D L PNE E L G + Y + + KM ++V G KG F+ + +
Sbjct: 179 VDYLIPNEHEALLLAGSEENFYVALRQ------KMK-HTLIVTRGEKGVT-FMHQNQLVS 230
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+PA V +DTT AGD F F+V EG E +RF A A+L V +GA S+P
Sbjct: 231 ---VPAFMVQAVDTTAAGDAFIGGFSVALAEGLGLPEAIRFGCAVAALSVTKEGAQTSLP 287
Query: 366 DRKSVLNLL 374
R+ V + +
Sbjct: 288 LRQEVEHFM 296
>gi|172058394|ref|YP_001814854.1| ribokinase [Exiguobacterium sibiricum 255-15]
gi|171990915|gb|ACB61837.1| ribokinase [Exiguobacterium sibiricum 255-15]
Length = 292
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 157/304 (51%), Gaps = 26/304 (8%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
VVGS + D+ VE DR P GETV T+ GGKGANQA A+L VG +G+DA
Sbjct: 6 VVGSISMDLVVESDRRPSAGETVIGSAFHTVPGGKGANQAVAIARLGGHVEMVGCIGDDA 65
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG I V ++ + D T H + ++G NSI++V N++ ++
Sbjct: 66 NGVAIRQNFETEHVGTTHLQTIADQRTGTAHITL---AEGDNSIVVVQSANLAVVYDENQ 122
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLNFI 248
+ L + +A ++LLQ EIP + QVA+ ++ G+PV+ + AP + ELL +
Sbjct: 123 LDSL--LGQADMILLQLEIPLATVKQVARYGKTHGIPVVLNP----APAIVLDDELLADV 176
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
L+PNE E G + G +++ K ++V G++G A F +GE +
Sbjct: 177 TYLTPNEHECGLIFGQQQPLEHWLTQYPNK--------LIVTEGSRG-ARFYDGEAIVT- 226
Query: 309 SIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+PA + V+DTTGAGDTF + AV +G + E +RFA AA + V+ GA MP
Sbjct: 227 --VPAIKTDVVDTTGAGDTFNGALAVSLTDGATLTEAIRFANKAAGMSVRALGAQGGMPT 284
Query: 367 RKSV 370
+ +
Sbjct: 285 HEQM 288
>gi|150008288|ref|YP_001303031.1| ribokinase [Parabacteroides distasonis ATCC 8503]
gi|256839426|ref|ZP_05544935.1| ribokinase [Parabacteroides sp. D13]
gi|149936712|gb|ABR43409.1| ribokinase [Parabacteroides distasonis ATCC 8503]
gi|256738356|gb|EEU51681.1| ribokinase [Parabacteroides sp. D13]
Length = 307
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 22/309 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ ++ + LP+ GETV T GGKGANQA A+L F+ + G
Sbjct: 9 ILVVGSSNTDMVIKTNHLPRPGETVLGGTFFMNPGGKGANQAVAVARLGGQVSFICKTGS 68
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y + D P+G A++ + + +N I++ G N + P
Sbjct: 69 DIFGHQSQQLFEEEGIDTSY--IFSDPKNPSGVALITVDAHAENCIVVASGANANLLPSD 126
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE----- 243
+ E ++KA ++L+Q EIP D+V VAK A VI + P P +
Sbjct: 127 LAKSE-EAIEKADLILMQLEIPMDTVEF-VAKMASKKNKRVILN------PAPAQTLSAT 178
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL + +++PNE+E ++G+ +A +MGVQ V+V LG+KG+ ++ +
Sbjct: 179 LLRHLYMITPNETEAEMISGVKITDEVSAKKAAQVIMEMGVQNVIVTLGSKGALIYCDS- 237
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA +V +DTT AGD F + V EG+ E +RFA A+++ V GA
Sbjct: 238 ---MVDMVPAIKVEAVDTTAAGDIFNGALTVALAEGRDLREAVRFACKASAISVTRVGAQ 294
Query: 362 PSMPDRKSV 370
S P R V
Sbjct: 295 SSAPYRNEV 303
>gi|304438118|ref|ZP_07398061.1| ribokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368891|gb|EFM22573.1| ribokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 310
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 147/305 (48%), Gaps = 14/305 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ R+P+ GET+A K GGKGANQA A++ + VG
Sbjct: 2 IAVIGSNNMDLISYAQRMPEPGETLAMKDFSIAYGGKGANQAVAAARMGADILMLTAVGT 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN--MSCWP 187
D G+ I L G+R DY +K P G A + + QN I+I G N ++
Sbjct: 62 DVFGQDIDVHLRAEGIRGDY---IKHVDAPNGTASIWVDDTAQNRILIHKGANALLNVQD 118
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ EDL +K +++LQ E+ V R GVP++ + + ++
Sbjct: 119 IERAAEDL---RKCSMIILQLEVNYDVVYHAVSFGREHGVPILLNPAPASTELDMARISC 175
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
D PNE+EL LT D+ + I EA G++ V+V LG+KG G
Sbjct: 176 CDFFMPNETELEILTNHVVDTMDAIQEAGAILLAQGMKNVIVTLGSKGVLWLHAG----G 231
Query: 308 QSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+IPA +DTTGAGD+F FA + + K+ + LR+A A A+L VQ +GA S P
Sbjct: 232 AELIPAFVVEAVDTTGAGDSFIGCFAAMYEQEKNVRDALRWANAFAALGVQKRGAQSSYP 291
Query: 366 DRKSV 370
R V
Sbjct: 292 TRGDV 296
>gi|338214147|ref|YP_004658204.1| ribokinase [Runella slithyformis DSM 19594]
gi|336307970|gb|AEI51072.1| ribokinase [Runella slithyformis DSM 19594]
Length = 313
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 10/307 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS+N D+ V+ ++LP GETV GGKGANQA A+L FV +VG
Sbjct: 5 ILVIGSSNTDMVVKANKLPAPGETVIGGVFLMNPGGKGANQAVAAARLGADVTFVAKVGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK +R ++ V D P+G A++ + G+NSI++ G N P +
Sbjct: 65 DIFGKQAIQGFRQDKIRTEF--VFADPKNPSGVALIGVDERGENSIMVAPGANGHLRPHE 122
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ LE V +A ++LLQ EIP I + + G+ +I + P+P E+ +
Sbjct: 123 V-IQALEAVPEARLLLLQLEIPLETVIATIEQGANQGLNIILNPAPAQ-PLPDEIYAHLF 180
Query: 250 ILSPNESELGRLTGMPTDSY--EQISEAVVKCHKMGVQQVLVKLGAKGSALF-VEGEKPI 306
++PNE+E LTGM +++ + + EA G++ V++ LGAKG+ L+ +G + I
Sbjct: 181 AITPNETETKLLTGMTVEAHDLDSLREAAAWFLAKGLKNVIITLGAKGAFLYNSDGGQLI 240
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
P DTT AGD F + V E KS E + FA AAS+ V GA S+P
Sbjct: 241 AA---PPVTATDTTAAGDVFNGALVVALSENKSLTEAVTFACKAASISVTRMGAQASVPT 297
Query: 367 RKSVLNL 373
RK V +L
Sbjct: 298 RKEVDSL 304
>gi|123440415|ref|YP_001004409.1| ribokinase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122087376|emb|CAL10157.1| ribokinase [Yersinia enterocolitica subsp. enterocolitica 8081]
Length = 308
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 158/309 (51%), Gaps = 12/309 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV + + GGKGANQA + F+ VGE
Sbjct: 6 LVVLGSINADHILNIEQFPRPGETVVGEQYKVAFGGKGANQAVAAGRSGANIAFIACVGE 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+ + D + G TG A++ + +G+N I I G N + PE
Sbjct: 66 DDIGDRVRLQLASDNI--DTAPIEAVAGTTTGVALIFVNGEGENVIGIHAGANSAVTPEY 123
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
G +V+ A +L+Q E P I AK A+ VI + AP +P ELL+
Sbjct: 124 LGRYQQQVI-DADALLMQLESPLGTVIAAAKLAKQHQTQVILNP----APARELPDELLS 178
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+D+++PNE+E RLTG+ + + ++A H G+ V++ LG++G L +G+ +
Sbjct: 179 LVDMITPNETEAERLTGIHIEQDDDAAKAAQILHDKGIATVIITLGSRGVWLSEQGQGKL 238
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+DT AGDTF + +EG++ +RFA AAA++ V GA PS+P
Sbjct: 239 VAGF--KVNAVDTIAAGDTFNGALLTALLEGQAMGSAVRFAHAAAAIAVTRPGAQPSIPW 296
Query: 367 RKSVLNLLQ 375
R + + LQ
Sbjct: 297 RAEIDSFLQ 305
>gi|440757702|ref|ZP_20936883.1| Ribokinase [Pantoea agglomerans 299R]
gi|436428466|gb|ELP26122.1| Ribokinase [Pantoea agglomerans 299R]
Length = 309
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 153/307 (49%), Gaps = 8/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + P+ GETV + Q GGKGANQA + F+ VG
Sbjct: 7 LAVLGSINADHILNLAHFPRPGETVIGQNYQIAFGGKGANQAVAAGRAGADIAFIACVGA 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I D L+ + + VV+ G TG A++ + DG+N+I I G N + P+
Sbjct: 67 DDMGKRIRDQLTQDNIDTTPVEVVE--GESTGVAMIFVNGDGENNIGIYSGANAALTPDC 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
V+ A +L+Q E P + A AR VI + + + ELL +D
Sbjct: 125 VARHQ-HVIADADALLMQLESPLESVLAAATLARQHHTQVILNPAPATS-LSDELLALVD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ +S E + A H G+ VL+ LG +G L GE Q
Sbjct: 183 IITPNETEAESLTGIAVNSDEDAARAAEVLHAKGIGTVLITLGRRGVWLSERGE---GQR 239
Query: 310 IIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
I + + IDT AGDTF +F +E K + +RFA AAA++ V GA PS+P R
Sbjct: 240 IAGFSVKAIDTIAAGDTFNGAFITARLEQKPMYDAVRFAHAAAAIAVTRPGAQPSVPWRT 299
Query: 369 SVLNLLQ 375
+ + LQ
Sbjct: 300 EIDDFLQ 306
>gi|288554287|ref|YP_003426222.1| ribokinase [Bacillus pseudofirmus OF4]
gi|288545447|gb|ADC49330.1| ribokinase [Bacillus pseudofirmus OF4]
Length = 309
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 154/312 (49%), Gaps = 15/312 (4%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+N P + V+GS+N D V + PKVGET+ GGKGANQA A+L F
Sbjct: 1 MNQRPKVTVIGSSNVDYVVRASKYPKVGETIIGSEFTQFMGGKGANQAVAAARLGADVTF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ +GED+ G I D L V ++ ++ KD +G A + + SD N I ++ G N
Sbjct: 61 ITAIGEDSQGSEIKDNLLKENVNVEGIH--KDTDESSGIAFINV-SDDTNKITVIPGANY 117
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---I 240
PE + + A IVL+Q EIP I+ + A +P+I + AP +
Sbjct: 118 KLKPEHIEIQKT-AISSADIVLIQMEIPIDTVIKAMEVACEFNIPIILNP----APAQIL 172
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
+ELL L+PN +E+ +TG+P + + I + V+ +++ G +G LF
Sbjct: 173 SEELLGKATYLTPNVTEMQVITGLPLSNQQSIQDGFSLLFNQRVKNIILTRGEEG-VLFG 231
Query: 301 EGEKPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
++P+ + + + +V +DTTGAGDTF A G E ++FA AA+L V
Sbjct: 232 SHDEPLLREV-QSMKVHPVDTTGAGDTFNGGLAYSLACGNDLEAAIQFANVAAALSVTKH 290
Query: 359 GAIPSMPDRKSV 370
GA MP K V
Sbjct: 291 GAQSGMPTLKEV 302
>gi|325568754|ref|ZP_08145047.1| ribokinase [Enterococcus casseliflavus ATCC 12755]
gi|325157792|gb|EGC69948.1| ribokinase [Enterococcus casseliflavus ATCC 12755]
Length = 309
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 154/308 (50%), Gaps = 11/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N DI + R+P++GET+ + GGKGANQA ++ T F+G++GE
Sbjct: 4 ITILGSVNMDIVITTTRMPRIGETIIGEQIDYFVGGKGANQAVAASRYGASTKFLGKIGE 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + LS LD +V ++ + TG A + ++ N I +V G N E
Sbjct: 64 DTFGEKVLQHLSREA--LDLSSVSREKNMFTGIASIFKLAE-DNCITVVPGAN-GLIDEA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + + + + I+L Q EIP Q A+ GV I + + +P ELL +ID
Sbjct: 120 YVQQTISELSQGDILLTQLEIPVETIKQALILAKKKGVLTILNPAPYNEIVP-ELLPYID 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
IL+PNE+E L G ++I + + K +++V G+KG FVE + +
Sbjct: 179 ILTPNETEFAALIGKEAILEDEIEQVIADWQKKYATRIVVTRGSKG-VTFVEKSQVVT-- 235
Query: 310 IIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
IP+ + V+DTTGAGDTF A EG E + A ASL VQ GA MP +
Sbjct: 236 -IPSNKVSVVDTTGAGDTFNGILAAALGEGADFYEAVSMANNGASLSVQKLGAQTGMPLK 294
Query: 368 KSVLNLLQ 375
+ ++
Sbjct: 295 SEIEEFMK 302
>gi|407773072|ref|ZP_11120373.1| ribokinase [Thalassospira profundimaris WP0211]
gi|407283536|gb|EKF09064.1| ribokinase [Thalassospira profundimaris WP0211]
Length = 307
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 8/308 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VVVGS+NFD + +LP G+TV+++ +T GGKG NQA A+L F+ ++G+
Sbjct: 3 IVVVGSSNFDFAARVAKLPVQGQTVSSQAYKTGPGGKGCNQALAVARLGVDPVFISKIGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + + L+ G LD +++ TG A++ + G+N I +VGG NM+
Sbjct: 63 DMLGNQLIETLAAEG--LDTTHLIVADEAQTGIALISIDEAGENMITVVGGANMTMTRSD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVA-KAARSAGVPVIFD-AGGMDAPIPQELLNF 247
E + ++ +LLQ E P V I A K AR V+ D A D + ++LL
Sbjct: 121 L-HEKQDYLRDCDYLLLQLECP-VVAIDCAIKYAREGKAKVMLDPAPVADLVVMRDLLAL 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
I++PN+SE LTG+ S A +K H MG + V++K+G G+ G+ +
Sbjct: 179 THIVTPNQSECLALTGIDPVDEATASSASIKLHDMGPETVIIKMGGDGAFYSSGGQTGMV 238
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+ +DT GAGD F A AV +S ++ +RFA A +L GA + P
Sbjct: 239 PGFV--VNTVDTVGAGDCFNAGLAVALHGDQSLKDAVRFACATGALSTTNNGAAEAAPRL 296
Query: 368 KSVLNLLQ 375
VL+L++
Sbjct: 297 ADVLSLIE 304
>gi|343085861|ref|YP_004775156.1| ribokinase [Cyclobacterium marinum DSM 745]
gi|342354395|gb|AEL26925.1| ribokinase [Cyclobacterium marinum DSM 745]
Length = 303
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 10/309 (3%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+N ++VVGSAN D+ + +++ P GET++ AGGKGANQA A+L
Sbjct: 1 MNQGHKILVVGSANTDMVIRVEKFPAPGETLSGHNFLLNAGGKGANQAVAAARLGGKVAM 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
+ ++G D GK + G+ ++ VV D +P+G A +++ G+N+I++ GG+N+
Sbjct: 61 MARLGNDLFGKQTIENFKKEGLNVE--GVVLDNKLPSGVAQIVVDKSGENTIVVAGGSNL 118
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE 243
+ + ++ +V++A ++LLQ E+P + VA+ A G VI + + + +
Sbjct: 119 ALNTRQV-NKYYSLVQEAEVILLQLEVPMETVLYVAQKATGLGKKVILNPAPAN-KLSDK 176
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
L I ++PNE+E LTG+ + A H GV+ V++ LGA G+ L
Sbjct: 177 LYASIYAITPNETETKFLTGINITGEKSAQHAADFFHDKGVKVVIITLGAAGAFL----S 232
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
P I + V +DTT AGDTF + A EE + FA AASL V GA
Sbjct: 233 TPDYSGTIATSEVEAVDTTAAGDTFNGALATALSNKMDWEEAVAFANKAASLSVTKHGAQ 292
Query: 362 PSMPDRKSV 370
S+P K +
Sbjct: 293 ASVPFLKDL 301
>gi|416840321|ref|ZP_11903582.1| ribokinase [Staphylococcus aureus O11]
gi|416845506|ref|ZP_11906005.1| ribokinase [Staphylococcus aureus O46]
gi|323440252|gb|EGA97966.1| ribokinase [Staphylococcus aureus O11]
gi|323443421|gb|EGB01037.1| ribokinase [Staphylococcus aureus O46]
Length = 304
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISTFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSHL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|221197889|ref|ZP_03570935.1| ribokinase [Burkholderia multivorans CGD2M]
gi|221204553|ref|ZP_03577570.1| ribokinase [Burkholderia multivorans CGD2]
gi|221175410|gb|EEE07840.1| ribokinase [Burkholderia multivorans CGD2]
gi|221181821|gb|EEE14222.1| ribokinase [Burkholderia multivorans CGD2M]
Length = 310
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Query: 75 SANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGK 134
S N D+ V RLP GET+A AGGKG NQA A+L +G VG DA+G
Sbjct: 17 SLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGADAHGD 76
Query: 135 LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDED 194
+ L G+ D + PTG A++++ QN+I+IV G N PE +
Sbjct: 77 ALRAGLEAEGI--DCTGLATSASAPTGVALIVVDDGSQNAIVIVAGGNGEVTPETVARHE 134
Query: 195 LEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSP 253
+ A +++ Q E PD+V +A A R G V+ + AP+P + L +D L P
Sbjct: 135 -ATLASADVLICQLETQPDTVRAALA-AGRRLGRTVVLNPAPAVAPLPADWLALVDYLIP 192
Query: 254 NESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPA 313
NE E LTG P A G + VL+ LG +G L + + + P
Sbjct: 193 NELEAAALTGRPMRDATDAEVAARALQARGARNVLITLGERG-VLALTADGIARHYPAPV 251
Query: 314 ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
R +DTT AGDTF FA G + ++ +RFA AA++ V GA PS+P
Sbjct: 252 VRAVDTTAAGDTFIGGFAARLAAGANVDDAIRFAQRAAAVSVTRAGAQPSIP 303
>gi|456356654|dbj|BAM91099.1| ribokinase [Agromonas oligotrophica S58]
Length = 302
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 157/315 (49%), Gaps = 26/315 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ +R P++GETVA ++ GGKGANQA AKL PT +G++G
Sbjct: 4 VIVAGSINMDVVATAERHPRIGETVAGQSVMYFPGGKGANQAVSAAKLGVPTALIGRLGR 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G + L+ G+ D V + TG A++ L + N+I+++ G N +
Sbjct: 64 DGFGAQLRAFLADQGI--DLAAVKESTSASTGTAIITL-AKADNTIVVIPGAN-----AE 115
Query: 190 FGDEDL-EVVKKAG-IVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE---- 243
G EDL +V AG + + Q EIP + + A++ G I + P P
Sbjct: 116 LGAEDLAQVALAAGDVAVSQFEIPQATIAAFFQRAKAVGATTILN------PAPASAFDS 169
Query: 244 -LLNFIDILSPNESELGRLTGMPTD---SYEQISEAVVKCHKMGVQQVLVKLGAKGSALF 299
L ID+L NE+ELG L + S +Q+ +AV Q V V LGA+G+
Sbjct: 170 GLFALIDVLVLNETELGFLADIELGDAPSLQQVKDAVRALKPNSDQTVCVTLGARGAVAV 229
Query: 300 VEGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKG 359
+GE + + A + +DTTGAGD F + A +G E + +A AAS+ VQ G
Sbjct: 230 SDGEARLVEG--RAVKAVDTTGAGDCFVGALAARLSQGAPMAEAIGYANLAASISVQRMG 287
Query: 360 AIPSMPDRKSVLNLL 374
A PSMP + V LL
Sbjct: 288 AGPSMPSAEEVRALL 302
>gi|261323720|ref|ZP_05962917.1| ribokinase [Brucella neotomae 5K33]
gi|261299700|gb|EEY03197.1| ribokinase [Brucella neotomae 5K33]
Length = 275
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 142/273 (52%), Gaps = 6/273 (2%)
Query: 67 PPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQ 126
P + V GS N D+ + LP+ G+TV A GGKGANQA AKL FVG
Sbjct: 7 PLKIFVFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGAIRFVGA 66
Query: 127 VGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
VG DA G+L + G+ + V+ D V TG A++ ++ GQN+I + G N + W
Sbjct: 67 VGHDAFGELALKQMREFGLDTGSVRVIDD--VDTGMAIIQVEETGQNTIAVCAGAN-ARW 123
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELL 245
D + KA I LLQRE+P N+ VAKA R+AG V+ D + DA +L+
Sbjct: 124 SSADIDAYGADIAKARITLLQREVPHEANLAVAKAVRAAGGTVLLDPAPVGDASQMADLI 183
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
DI+SPNE+E +TG+ A K + G + V++KLG++G+ L E
Sbjct: 184 ALSDIISPNETEAAEITGIEPTDLASAEAAGRKLLERGPKIVILKLGSRGALLVTADE-- 241
Query: 306 IKQSIIPAARVIDTTGAGDTFTASFAVGFVEGK 338
+K +V+DT AGD+F FAV F + +
Sbjct: 242 VKHFTPFKVKVVDTVAAGDSFNGGFAVAFSQAR 274
>gi|433462917|ref|ZP_20420487.1| ribokinase RbsK [Halobacillus sp. BAB-2008]
gi|432188232|gb|ELK45444.1| ribokinase RbsK [Halobacillus sp. BAB-2008]
Length = 296
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 158/319 (49%), Gaps = 42/319 (13%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS++ D+ V + P GETV ++ QT+ GGKGANQA A+L Y +G VG
Sbjct: 6 IAVIGSSSMDLVVTSAKRPSAGETVLGESFQTVPGGKGANQAVAAARLGADVYMIGCVGT 65
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + GV DY+ V D T H ++ ++G NSI++V G N P+
Sbjct: 66 DPYGEAVLANFRENGVHTDYVEPVTDARTGTAHIIL---AEGDNSIVVVKGANDHVTPD- 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+ ++ + + ++++Q+EIP+ +A+ + GVP++ + AP IP E++
Sbjct: 122 YVEKLIPFFQTCDLLMIQQEIPEETVETMAQISADIGVPLLLNP----APARQIPAEVIE 177
Query: 247 FIDILSPNESELGRL--TGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+PNE E L G P D V K + G L EGEK
Sbjct: 178 QAAFLTPNEHEAAVLFDGGNPED--------VTKRY-------------PGKLLITEGEK 216
Query: 305 PIK------QSIIP--AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQ 356
++ + +IP + +V+DTTGAGDTF A+F E + E L FA AASL V
Sbjct: 217 GVRYYDGATEKLIPSFSVQVVDTTGAGDTFNAAFGTAIAEKQDMEAALLFANRAASLSVT 276
Query: 357 VKGAIPSMPDRKSVLNLLQ 375
GA MP R+ V L+
Sbjct: 277 GFGAQGGMPTREEVERALR 295
>gi|434391435|ref|YP_007126382.1| ribokinase [Gloeocapsa sp. PCC 7428]
gi|428263276|gb|AFZ29222.1| ribokinase [Gloeocapsa sp. PCC 7428]
Length = 310
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 161/312 (51%), Gaps = 17/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ ++ RLP GET+ T+ GGKGANQA A+L T VG+VG+
Sbjct: 5 VLVFGSINMDLVAKVPRLPTPGETLLGHNLTTVPGGKGANQAVAVARLGISTAIVGRVGK 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L V+ D + + D +G A++ + + +N II++ G N +
Sbjct: 65 DQFGQELLQNLQSDRVQTDAVYI--DSSKTSGVAIIAVDDNAENHIIVIPGANGNV---- 118
Query: 190 FGDEDLEVVK----KAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
G+ED+E + KA ++LLQ EIP S Q A+AA+ AGV VI D +P EL
Sbjct: 119 -GEEDIERLTQQLPKASVLLLQLEIPLSAVQQAAQAAQQAGVKVILDPAPAPTALPPELY 177
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+DI++PN E G+L DS E +A + GV+ ++KLGA G +F +
Sbjct: 178 PVVDIITPNAVEAGQLVNFTVDSPESAEKAARVLQQRGVKTAIIKLGATG--VFCATAE- 234
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ IPA + +DT AGD F A +G E + + AA +L GA S
Sbjct: 235 -ESFFIPAFSVKAVDTVAAGDAFNGGLAAALSQGYLLREAVVWGAATGALSTTKPGAQSS 293
Query: 364 MPDRKSVLNLLQ 375
+P R++V +Q
Sbjct: 294 LPTRETVEAFMQ 305
>gi|342217283|ref|ZP_08709930.1| putative ribokinase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341588173|gb|EGS31573.1| putative ribokinase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 296
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 152/296 (51%), Gaps = 7/296 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+ S + D ++ PK G+TV AK + GGKG NQA + G VG
Sbjct: 3 ILVLASLHMDQNYILESFPKPGQTVLAKEAYLSRGGKGQNQAVAICRCGGHVGVFGAVGR 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG L+ AL GV + Y+ + KD PTG A + +Q DG+N+I++ G + + E
Sbjct: 63 DENGTLLEKALEEDGVDIRYL-MKKD--CPTGRASIYIQEDGENTIVVYPGADFAMTLED 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D +V++ ++LQ E+P ++ + + A+ GV + + L ++D
Sbjct: 120 LEGLD-QVLEGVQALVLQLELPLNLVYRALEVAKKKGVLTFLNPAPAVVDFDPKYLTYVD 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE EL L G S +Q+ EA + GV QVLV LG++GS L V G+ Q
Sbjct: 179 FLIPNEGELSDLLGRKISS-DQVEEAARELLNKGVGQVLVTLGSRGS-LLVHGDGSFYQE 236
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ +DTTGAGD + +F ++E K ++ + FA + A+ V+ GA+ S P
Sbjct: 237 -DHKVKAVDTTGAGDAYIGAFVKKYLEKKDIKKAMAFATSYAARVVEAYGALDSFP 291
>gi|255015442|ref|ZP_05287568.1| ribokinase [Bacteroides sp. 2_1_7]
gi|410101533|ref|ZP_11296461.1| ribokinase [Parabacteroides sp. D25]
gi|409239331|gb|EKN32115.1| ribokinase [Parabacteroides sp. D25]
Length = 307
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 22/309 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS+N D+ V+ + LP+ GETV T GGKGANQA +L F+ + G
Sbjct: 9 ILVVGSSNTDMVVKTNHLPRPGETVLGGTFFMNPGGKGANQAVAVVRLGGQVSFICKTGS 68
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G G+ Y + D P+G A++ + + +N I++ G N + P
Sbjct: 69 DIFGHQSQQLFEEEGIDTSY--IFSDPKNPSGVALITVDAHAENCIVVASGANANLLPSD 126
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE----- 243
+ E ++KA ++L+Q EIP D+V VAK A VI + P P +
Sbjct: 127 LAKSE-EAIEKADLILMQLEIPMDTVEF-VAKMASKKNKRVILN------PAPAQTLSAT 178
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL + +++PNE+E ++G+ +A +MGVQ V+V LG+KG+ ++ +
Sbjct: 179 LLRHLYMITPNETEAEMISGVKITDEVSAKKAAQVIMEMGVQNVIVTLGSKGALIYCDS- 237
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
++PA +V +DTT AGD F + V EG+ E +RFA A+++ V GA
Sbjct: 238 ---MVDMVPAIKVEAVDTTAAGDIFNGALTVALAEGRDLREAVRFACKASAISVTRVGAQ 294
Query: 362 PSMPDRKSV 370
S+P R V
Sbjct: 295 SSVPYRNEV 303
>gi|404319638|ref|ZP_10967571.1| ribokinase [Ochrobactrum anthropi CTS-325]
Length = 312
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 165/313 (52%), Gaps = 6/313 (1%)
Query: 64 INTPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYF 123
+ T + + GS N D+ + LP+ G+TV A GGKGANQA AK+ F
Sbjct: 1 METVLKIFIFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKMGGDIRF 60
Query: 124 VGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNM 183
VG VG DA G+L + G+ + + V+ GV TG A++ ++ GQN+I + G N
Sbjct: 61 VGAVGNDAFGELALKQMQEFGLNTESVRVID--GVDTGMAIIQVEEAGQNTIAVCAGAN- 117
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQ 242
+ W + + +A I LLQRE+P N+ VAKAAR+AG V+ D + DA
Sbjct: 118 AYWSAADINAYAADIARAKITLLQREVPHEANLAVAKAARAAGGSVLLDPAPVGDASRMA 177
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
+L++ DI+SPNE+E +TG+ A + G + V+VKLG++G+ L
Sbjct: 178 DLISLSDIISPNETEAAEITGIEPTDLASAEAAARNLLERGPKTVIVKLGSRGALLVTAD 237
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
E +K V+DT AGD+F FAV F EG+ +C+R+ +AA ++ V GA
Sbjct: 238 E--VKHFAPFKVEVVDTVAAGDSFNGGFAVAFSEGQPLHDCVRYGSAAGAIAVTRAGAGA 295
Query: 363 SMPDRKSVLNLLQ 375
+ P + V LLQ
Sbjct: 296 AAPTAEEVAALLQ 308
>gi|323492279|ref|ZP_08097437.1| ribokinase [Vibrio brasiliensis LMG 20546]
gi|323313592|gb|EGA66698.1| ribokinase [Vibrio brasiliensis LMG 20546]
Length = 306
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 162/313 (51%), Gaps = 22/313 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L+ T F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRNYQVIPGGKGANQAVAAARLNADTGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVV---KDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCW 186
DA G I + ++D +N+ + PTG A++ + G+NSI I N
Sbjct: 64 DAFGINIRENF-----KMDNINIAGVKMEPNCPTGIAMIQVSDSGENSICISAEANARLT 118
Query: 187 PEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQE 243
E + DLE ++ A +L+Q E P S + ++ A+ A VI + AP + E
Sbjct: 119 AEAI-EPDLERIRAAKYLLMQLETPMSGIEKASRVAKEARTNVILNP----APARELSDE 173
Query: 244 LLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE 303
LL +D+++PNE+E LTG+ + EA H+ G++ V++ LGAKG L G
Sbjct: 174 LLACVDVITPNETEAEVLTGITVIDDDSAQEAANVLHRKGIEIVMITLGAKGVWLSENG- 232
Query: 304 KPIKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAI 361
+ +I +V DTT AGDTF + G +E + ++FA AAA++ V GA
Sbjct: 233 ---RGELITGFKVDATDTTAAGDTFNGALVTGLLEDLPLKSAIKFAHAAAAISVTRFGAQ 289
Query: 362 PSMPDRKSVLNLL 374
S+P R V L
Sbjct: 290 TSIPTRAEVDTFL 302
>gi|282921565|ref|ZP_06329283.1| ribokinase [Staphylococcus aureus subsp. aureus C427]
gi|282315980|gb|EFB46364.1| ribokinase [Staphylococcus aureus subsp. aureus C427]
Length = 304
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKVFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|82749974|ref|YP_415715.1| ribokinase [Staphylococcus aureus RF122]
gi|82655505|emb|CAI79896.1| ribokinase [Staphylococcus aureus RF122]
Length = 304
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 157/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V+VGS N D ++ ++R ++GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVIVGSTNVDQFLTVERYAQLGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIIDADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL V+ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVKKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|225405661|ref|ZP_03760850.1| hypothetical protein CLOSTASPAR_04882 [Clostridium asparagiforme
DSM 15981]
gi|225042806|gb|EEG53052.1| hypothetical protein CLOSTASPAR_04882 [Clostridium asparagiforme
DSM 15981]
Length = 301
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 160/307 (52%), Gaps = 21/307 (6%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
VVGS N D+ V +++PK GET+ + + GGKGANQA A+L G VG+D
Sbjct: 12 VVGSINMDMTVTAEKIPKKGETITGRELYYIPGGKGANQAVAMARLGANVEMFGCVGDDG 71
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
NG L+ + L GV+ +++ V+ PTG A + + + N+I+IV G N G
Sbjct: 72 NGALLIENLKAQGVKTEHIKTVEH--TPTGVAFITV-GERDNTIVIVAGANNRVDRAYIG 128
Query: 192 DEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
+ E +KK+ +VLLQ EIP +S+ + R+ +PVI + + + Q L+ +
Sbjct: 129 HIEHE-LKKSDMVLLQHEIPLESIEYVIDLCYRNQ-IPVILNPAPARS-LKQNLIEKVTY 185
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
L+PNE E L G D E + + +++++ LG+KG K +
Sbjct: 186 LTPNEHEARILFG-AVDRDELL--------RRYPEKLIITLGSKGVCTC---RKSGEILT 233
Query: 311 IPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
IPA VIDTTGAGDT +F V EG + EE L+FA AAA L + GA MP R+
Sbjct: 234 IPARPGNVIDTTGAGDTLNGAFCVKIAEGANIEEALQFANAAAGLSTEKLGAQEGMPVRE 293
Query: 369 SVLNLLQ 375
V N L+
Sbjct: 294 EVTNALR 300
>gi|408357319|ref|YP_006845850.1| ribokinase [Amphibacillus xylanus NBRC 15112]
gi|407728090|dbj|BAM48088.1| ribokinase [Amphibacillus xylanus NBRC 15112]
Length = 289
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 30/312 (9%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + V+GS N D+ +R+P GET+ ++ + + GGKGANQA A+L +F+G
Sbjct: 2 TKPKITVIGSVNLDMVTSTERVPNQGETLTGQSFEMIPGGKGANQAVAAARLGADVHFIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+VG+D G+++ L+ G+ +D + V G +G A +++ SD N II G N
Sbjct: 62 RVGDDPFGEILLKNLTENGIHVDGVEPVT--GEHSGIATIIV-SDRDNRIIYTPGANNLV 118
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
PE + + L ++ ++ V+LQ EIP V G+ VI + + P+ + +
Sbjct: 119 TPE-YVEHFLPIIDQSDYVVLQLEIPMETVEYVTGYCYENGIKVILNPAPIQ-PLSETVQ 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
++PNESE V +Q++V LG G + +GE
Sbjct: 177 KQATYITPNESE-------------------VVGVNASTEQLIVTLGKDGVKYYQDGE-- 215
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+ I+PA V +DTTGAGDTF + AVG +G S E+ +++ AAA+L VQ GA
Sbjct: 216 --ERIVPAYTVEAVDTTGAGDTFNGALAVGLAKGWSLEKAIKYGNAAAALSVQKFGAQDG 273
Query: 364 MPDRKSVLNLLQ 375
+P V LQ
Sbjct: 274 IPTVAEVEQFLQ 285
>gi|365540959|ref|ZP_09366134.1| ribokinase [Vibrio ordalii ATCC 33509]
Length = 306
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 155/308 (50%), Gaps = 20/308 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + Q + GGKGANQA A+L F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVPSFPRPGETLHGRHYQVIPGGKGANQAVAAARLKADIGFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGV------PTGHAVVMLQSDGQNSIIIVGGTNM 183
DA G I + +LD +N+ GV PTG A++ + G+NSI I N
Sbjct: 64 DAFGINIRENF-----KLDGINI---AGVKMQPNCPTGIAMIQVSDSGENSICISAEAND 115
Query: 184 SCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD-AGGMDAPIPQ 242
+ + DL + A +L+Q E P I+ A+ A+ VI + A D +P
Sbjct: 116 KLTADAI-EADLAAIGAAKYLLMQLETPIDGIIKAAQIAKQNRTNVILNPAPARD--LPD 172
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
LL +D+++PNE+E RLTG+ D A + HK G++ VL+ LGAKG L G
Sbjct: 173 TLLECVDVITPNETEAQRLTGITVDDDHTAQLAANELHKKGIEIVLITLGAKGVWLSQNG 232
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+ V DTT AGDTF + G +E E ++FA AAA++ V GA
Sbjct: 233 RGQLIAGF--KVDVTDTTAAGDTFNGALVTGLLEDMPLESAIKFAHAAAAISVTRFGAQT 290
Query: 363 SMPDRKSV 370
S+P R V
Sbjct: 291 SIPTRIEV 298
>gi|365883721|ref|ZP_09422846.1| ribokinase [Bradyrhizobium sp. ORS 375]
gi|365287792|emb|CCD95377.1| ribokinase [Bradyrhizobium sp. ORS 375]
Length = 300
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 162/308 (52%), Gaps = 22/308 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+VV GS N D+ +R P++GETVA ++ GGKGANQA AKL PT +G++G
Sbjct: 4 VVVAGSINMDVVATAERHPRIGETVAGQSVMYFPGGKGANQAVSAAKLGAPTALIGRLGR 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+ + L+ G+ D V G TG A++ L ++ N+I+++ G+N E
Sbjct: 64 DAFGEQLRVFLADQGI--DLAAVKDSAGGSTGTAIITL-ANADNTIVVIPGSN----AEV 116
Query: 190 FGDEDLEVVKKAG-IVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIP-----QE 243
D+ ++ AG + + Q EIP + I + A++AG I + P P Q
Sbjct: 117 SVDDIAQIALSAGDVAVSQFEIPQATIIAFFQQAKAAGATTILN------PAPAGAFAQG 170
Query: 244 LLNFIDILSPNESELGRLTGMPT-DSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
L +D+L NE+ELG L+G+ D+ Q +AV H Q + V LGA+G+ G
Sbjct: 171 LFALVDVLVLNETELGFLSGVEIGDAPPQAVDAVAALHPRADQTICVTLGARGAIAVRGG 230
Query: 303 EKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIP 362
+ + + A + +DTTGAGD F + A +G + + + +A AAS+ VQ GA P
Sbjct: 231 DARLVEG--RAVKAVDTTGAGDCFVGALAARLSQGAAIADAIAYANVAASISVQRMGAGP 288
Query: 363 SMPDRKSV 370
SMP + V
Sbjct: 289 SMPTAEEV 296
>gi|221212976|ref|ZP_03585952.1| ribokinase [Burkholderia multivorans CGD1]
gi|221167189|gb|EED99659.1| ribokinase [Burkholderia multivorans CGD1]
Length = 310
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Query: 75 SANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGK 134
S N D+ V RLP GET+A AGGKG NQA A+L +G VG DA+G
Sbjct: 17 SLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGADAHGD 76
Query: 135 LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDED 194
+ L G+ D + PTG A++++ QN+I+IV G N PE +
Sbjct: 77 ALRAGLEAEGI--DCTGLATSASAPTGVALIVVDDGSQNAIVIVAGGNGEVTPETVARHE 134
Query: 195 LEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSP 253
+ A +++ Q E PD+V +A A R G V+ + AP+P + L +D L P
Sbjct: 135 -ATLASADVLICQLETPPDTVRAALA-AGRRLGRTVVLNPAPAVAPLPADWLALVDYLIP 192
Query: 254 NESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPA 313
NE E LTG P A G + VL+ LG +G L + + + P
Sbjct: 193 NELEAAALTGRPMRDATDAEVAARALQARGARNVLITLGERG-VLALTADGIARHYPAPI 251
Query: 314 ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
R +DTT AGDTF FA G + ++ +RFA AA++ V GA PS+P
Sbjct: 252 VRAVDTTAAGDTFIGGFAARLAAGANVDDAIRFAQRAAAVSVTRAGAQPSIP 303
>gi|307262160|ref|ZP_07543811.1| Ribokinase [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306868137|gb|EFM99962.1| Ribokinase [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
Length = 303
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 14/308 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY----FVG 125
L V+GS N D + + PK GET+ GGKGANQA A++ + + F+
Sbjct: 4 LCVLGSVNADHVIRVPYFPKAGETLKGGHYHIAYGGKGANQAVAAARVRNTSLVEVDFIA 63
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+G D G+ + A G+ +++ V D TG A++ + G+NSI+I G N +
Sbjct: 64 CIGADDIGRAMKQAFVQDGINPEHIVEVADQ--MTGIAMIQVADSGENSIVISAGANAN- 120
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
E + +++A +L+Q E P + K A++ VI + P+ E+L
Sbjct: 121 LDESVVAQHQATIERADCLLVQLETPLQAVEKALKIAKANHTQVILNPAPAQ-PLSDEIL 179
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE+E LTG+ + +A H+ G+Q VL+ LGAKG+ L G
Sbjct: 180 ANIDIITPNETETALLTGIQVVDEQTAQQAANVFHQKGIQTVLITLGAKGAFLSENGNG- 238
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
II +V +DTT AGDTF + A+ +EGKS + + FA A+S+ V GA S
Sbjct: 239 ---EIIAGFKVTPVDTTAAGDTFNGALAIALLEGKSMRDAVMFAHKASSISVTRMGAQSS 295
Query: 364 MPDRKSVL 371
+P R ++
Sbjct: 296 IPTRAELV 303
>gi|418954179|ref|ZP_13506155.1| ribokinase [Staphylococcus aureus subsp. aureus IS-189]
gi|375373519|gb|EHS77189.1| ribokinase [Staphylococcus aureus subsp. aureus IS-189]
Length = 304
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTRFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|49482505|ref|YP_039729.1| ribokinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|221141152|ref|ZP_03565645.1| putative ribokinase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|257424407|ref|ZP_05600836.1| ribokinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427078|ref|ZP_05603480.1| ribokinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429713|ref|ZP_05606100.1| ribokinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257432360|ref|ZP_05608723.1| ribokinase [Staphylococcus aureus subsp. aureus E1410]
gi|257435319|ref|ZP_05611370.1| ribokinase [Staphylococcus aureus subsp. aureus M876]
gi|282902852|ref|ZP_06310745.1| ribokinase [Staphylococcus aureus subsp. aureus C160]
gi|282907253|ref|ZP_06315101.1| ribokinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907597|ref|ZP_06315439.1| ribokinase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282912498|ref|ZP_06320294.1| ribokinase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913118|ref|ZP_06320910.1| ribokinase [Staphylococcus aureus subsp. aureus M899]
gi|282922746|ref|ZP_06330436.1| ribokinase [Staphylococcus aureus subsp. aureus C101]
gi|283959705|ref|ZP_06377146.1| ribokinase [Staphylococcus aureus subsp. aureus A017934/97]
gi|293498169|ref|ZP_06666023.1| ribokinase [Staphylococcus aureus subsp. aureus 58-424]
gi|293511761|ref|ZP_06670455.1| ribokinase [Staphylococcus aureus subsp. aureus M809]
gi|293550371|ref|ZP_06673043.1| ribokinase [Staphylococcus aureus subsp. aureus M1015]
gi|295426805|ref|ZP_06819444.1| ribokinase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297588988|ref|ZP_06947629.1| ribokinase [Staphylococcus aureus subsp. aureus MN8]
gi|304380228|ref|ZP_07362948.1| ribokinase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|384860912|ref|YP_005743632.1| putative ribokinase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384866118|ref|YP_005746314.1| ribokinase [Staphylococcus aureus subsp. aureus TCH60]
gi|384868826|ref|YP_005751540.1| Ribokinase [Staphylococcus aureus subsp. aureus T0131]
gi|387141900|ref|YP_005730293.1| putative ribokinase [Staphylococcus aureus subsp. aureus TW20]
gi|415683324|ref|ZP_11448557.1| putative ribokinase [Staphylococcus aureus subsp. aureus CGS00]
gi|417887348|ref|ZP_12531476.1| ribokinase [Staphylococcus aureus subsp. aureus 21195]
gi|418277530|ref|ZP_12892011.1| ribokinase [Staphylococcus aureus subsp. aureus 21178]
gi|418566272|ref|ZP_13130654.1| ribokinase [Staphylococcus aureus subsp. aureus 21264]
gi|418580943|ref|ZP_13145028.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597814|ref|ZP_13161332.1| ribokinase [Staphylococcus aureus subsp. aureus 21342]
gi|418601447|ref|ZP_13164878.1| ribokinase [Staphylococcus aureus subsp. aureus 21345]
gi|418871447|ref|ZP_13425825.1| ribokinase [Staphylococcus aureus subsp. aureus IS-125]
gi|418890791|ref|ZP_13444913.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896655|ref|ZP_13450730.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418899573|ref|ZP_13453636.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418907992|ref|ZP_13462006.1| ribokinase [Staphylococcus aureus subsp. aureus CIG149]
gi|418916114|ref|ZP_13470078.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418921899|ref|ZP_13475819.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418948253|ref|ZP_13500571.1| ribokinase [Staphylococcus aureus subsp. aureus IS-157]
gi|418981174|ref|ZP_13528890.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|418984767|ref|ZP_13532460.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|424784109|ref|ZP_18210925.1| Ribokinase [Staphylococcus aureus CN79]
gi|49240634|emb|CAG39292.1| putative ribokinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257273425|gb|EEV05527.1| ribokinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257276709|gb|EEV08160.1| ribokinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257280194|gb|EEV10781.1| ribokinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257283239|gb|EEV13371.1| ribokinase [Staphylococcus aureus subsp. aureus E1410]
gi|257285915|gb|EEV16031.1| ribokinase [Staphylococcus aureus subsp. aureus M876]
gi|269939787|emb|CBI48155.1| putative ribokinase [Staphylococcus aureus subsp. aureus TW20]
gi|282314967|gb|EFB45353.1| ribokinase [Staphylococcus aureus subsp. aureus C101]
gi|282323218|gb|EFB53537.1| ribokinase [Staphylococcus aureus subsp. aureus M899]
gi|282324194|gb|EFB54510.1| ribokinase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282328502|gb|EFB58773.1| ribokinase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330152|gb|EFB59673.1| ribokinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282597311|gb|EFC02270.1| ribokinase [Staphylococcus aureus subsp. aureus C160]
gi|283789297|gb|EFC28124.1| ribokinase [Staphylococcus aureus subsp. aureus A017934/97]
gi|290919418|gb|EFD96494.1| ribokinase [Staphylococcus aureus subsp. aureus M1015]
gi|291097100|gb|EFE27358.1| ribokinase [Staphylococcus aureus subsp. aureus 58-424]
gi|291465719|gb|EFF08251.1| ribokinase [Staphylococcus aureus subsp. aureus M809]
gi|295129257|gb|EFG58884.1| ribokinase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297577499|gb|EFH96212.1| ribokinase [Staphylococcus aureus subsp. aureus MN8]
gi|302750141|gb|ADL64318.1| putative ribokinase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304341209|gb|EFM07128.1| ribokinase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312436623|gb|ADQ75694.1| ribokinase [Staphylococcus aureus subsp. aureus TCH60]
gi|315194724|gb|EFU25113.1| putative ribokinase [Staphylococcus aureus subsp. aureus CGS00]
gi|329312961|gb|AEB87374.1| Ribokinase [Staphylococcus aureus subsp. aureus T0131]
gi|341857936|gb|EGS98741.1| ribokinase [Staphylococcus aureus subsp. aureus 21195]
gi|365173288|gb|EHM63857.1| ribokinase [Staphylococcus aureus subsp. aureus 21178]
gi|371970996|gb|EHO88407.1| ribokinase [Staphylococcus aureus subsp. aureus 21264]
gi|374393224|gb|EHQ64538.1| ribokinase [Staphylococcus aureus subsp. aureus 21342]
gi|374398559|gb|EHQ69726.1| ribokinase [Staphylococcus aureus subsp. aureus 21345]
gi|375368199|gb|EHS72119.1| ribokinase [Staphylococcus aureus subsp. aureus IS-125]
gi|375373097|gb|EHS76799.1| ribokinase [Staphylococcus aureus subsp. aureus IS-157]
gi|377706792|gb|EHT31087.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377708445|gb|EHT32734.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377708846|gb|EHT33126.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377712738|gb|EHT36954.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377733956|gb|EHT57996.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377736439|gb|EHT60455.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377752343|gb|EHT76266.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|377757215|gb|EHT81104.1| ribokinase [Staphylococcus aureus subsp. aureus CIG149]
gi|377762877|gb|EHT86738.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC341D]
gi|421957475|gb|EKU09794.1| Ribokinase [Staphylococcus aureus CN79]
Length = 304
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|418324530|ref|ZP_12935765.1| ribokinase [Staphylococcus pettenkoferi VCU012]
gi|365225698|gb|EHM66940.1| ribokinase [Staphylococcus pettenkoferi VCU012]
Length = 302
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 12/305 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+VV+GS N D ++ ++R K GET+ + +Q GGKGANQA A+L T F+ +VG
Sbjct: 5 VVVLGSTNVDQFLTVERYAKPGETLHVEEAQKAYGGGKGANQAIATARLGAETTFISKVG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+ + G+ Y VV+ TG A + + + GQN+I + GG NM+
Sbjct: 65 TEGIADFMFKDFEAAGIDTSY--VVETEQAQTGQAFITVDAQGQNTIYVYGGANMTIDEA 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + +A ++ Q E+P K AR+ GV + + A +P +LL I
Sbjct: 123 DVARAE-QAIAEADFIVAQLEVPIPAITAAFKMARAHGVTTLLNPAPAKA-LPDDLLQLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNESE L+G+P + E+ H +G+ VL+ LG G+ F + +Q
Sbjct: 181 DIIVPNESEAETLSGVPVTDEASMRESAAYFHDLGIHTVLITLGEHGT--FYSTDAGSEQ 238
Query: 309 SIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
+PA + +DTT AGDTF + S + + +A A SL VQ GA ++P
Sbjct: 239 --LPAYPVKAVDTTAAGDTFIGALVSHLASDMSNLSDAIDYANKAGSLTVQRAGAQAAIP 296
Query: 366 DRKSV 370
+
Sbjct: 297 HASDI 301
>gi|153940649|ref|YP_001390909.1| ribokinase [Clostridium botulinum F str. Langeland]
gi|384461953|ref|YP_005674548.1| ribokinase [Clostridium botulinum F str. 230613]
gi|152936545|gb|ABS42043.1| ribokinase [Clostridium botulinum F str. Langeland]
gi|295318970|gb|ADF99347.1| ribokinase [Clostridium botulinum F str. 230613]
Length = 303
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 155/312 (49%), Gaps = 17/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS D+ IDR+PK GET+ A + GGKGANQA A+L V +VG+
Sbjct: 3 IAVIGSNMVDLISYIDRMPKEGETLEALDFKMGCGGKGANQAITAARLKSDVMMVSKVGD 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ GV D++ V K+ +G A + + + +NSI+I+ G N + P
Sbjct: 63 DLFGQNTIKNFKNNGVNTDFVTVQKNQA--SGVAPIFVDKESKNSILIIKGANKNLSPTD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQEL-LNFI 248
D E +KK +++LQ EI A +PV+ + AP +EL N++
Sbjct: 121 IDDAS-EELKKCSLIILQLEIELETVYYSIDFANKNNIPVLLNP----APATKELDFNYV 175
Query: 249 ---DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D PNE+EL LT P ++ E I EA GV+ V+V +G+KG L++ +
Sbjct: 176 YKCDFFVPNETELEILTNKPVNTIEDIKEAAHFIEDKGVKNVIVTMGSKG-LLWINKD-- 232
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
++ I A +V +DTTGAGD F FA +V K+ L A A A+L V G S
Sbjct: 233 -EEHFIKARKVDAVDTTGAGDGFIGCFAHYYVATKNILLALEKATAYAALSVTRYGTQTS 291
Query: 364 MPDRKSVLNLLQ 375
P ++ L+
Sbjct: 292 YPTKEEFEEFLK 303
>gi|307250966|ref|ZP_07532892.1| Ribokinase [Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306856994|gb|EFM89124.1| Ribokinase [Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 303
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 14/308 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY----FVG 125
L V+GS N D + + PK GET+ GGKGANQA A++ + + F+
Sbjct: 4 LCVLGSVNADHVIRVPYFPKAGETLKGGHYHIAYGGKGANQAVAAARVRNTSLVEVDFIA 63
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+G D G+ + A G+ +++ V D TG A++ + G+NSI+I G N +
Sbjct: 64 CIGADDIGRAMKQAFVQDGINPEHIVEVADQ--MTGIAMIQVADSGENSIVISAGANAN- 120
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
E + +++A +L+Q E P + K A++ VI + P+ E+L
Sbjct: 121 LDESVVAQHQATIERADCLLVQLETPLQAVEKALKIAKANHTQVILNPAPAQ-PLSDEIL 179
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
ID+++PNE+E LTG+ + +A H+ G+Q VL+ LGAKG+ L G
Sbjct: 180 ANIDMITPNETETALLTGIQVVDEQTAQQAANVFHQKGIQTVLITLGAKGAFLSENG--- 236
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
II +V +DTT AGDTF + A+ +EGKS + + FA A+S+ V GA S
Sbjct: 237 -NSEIIAGFKVTPVDTTAAGDTFNGALAIALLEGKSMRDAVMFAHKASSISVTRMGAQSS 295
Query: 364 MPDRKSVL 371
+P R ++
Sbjct: 296 IPTRAELV 303
>gi|257126319|ref|YP_003164433.1| ribokinase [Leptotrichia buccalis C-1013-b]
gi|257050258|gb|ACV39442.1| ribokinase [Leptotrichia buccalis C-1013-b]
Length = 305
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 163/311 (52%), Gaps = 18/311 (5%)
Query: 71 VVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGED 130
+V+GS N D+ V++++LPK+GET+ GGKGANQA AKL T +G VG+D
Sbjct: 5 LVIGSLNMDMTVKVEKLPKLGETIFGNEFYESCGGKGANQAVAVAKLGMKTEMIGMVGKD 64
Query: 131 ANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKF 190
+ G+ + L GV+ D NV+K + TG A++ + +G N+II++ G+N EK
Sbjct: 65 SQGEKLIQNLVDNGVKAD--NVIKSDEL-TGRAIITVDKNGDNNIIVIAGSNFKI-TEKD 120
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN---- 246
+ V+ + +V+LQ EIP SV A+ G +F+ P P LN
Sbjct: 121 IQNKVNVIAENDVVILQNEIPLSVVEFCLLKAKELGKITVFN------PAPATKLNDRIF 174
Query: 247 -FIDILSPNESELGRLTGMPTDSYEQISEAVV-KCHKMGVQQVLVKLGAKGSALFVEGEK 304
D L NE+E+ + + S E +E ++ K + G++ +++ LG KG F +
Sbjct: 175 HNTDYLILNETEMEEIFEIKI-SDEGYAEKILHKKEEHGIKNIILTLGEKGCVYF-DKNN 232
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
I + + IDTT AGD+F +FA+ E E +++A A +++ V +GA S+
Sbjct: 233 DINKYEAYKVKAIDTTAAGDSFIGAFAMKICECGDTGEAIKYATAVSAIVVTRQGAQSSI 292
Query: 365 PDRKSVLNLLQ 375
P + + + L+
Sbjct: 293 PTKDEIKDFLR 303
>gi|379020055|ref|YP_005296717.1| ribokinase [Staphylococcus aureus subsp. aureus M013]
gi|418952012|ref|ZP_13504069.1| ribokinase [Staphylococcus aureus subsp. aureus IS-160]
gi|359829364|gb|AEV77342.1| Ribokinase [Staphylococcus aureus subsp. aureus M013]
gi|375370270|gb|EHS74090.1| ribokinase [Staphylococcus aureus subsp. aureus IS-160]
Length = 304
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ ++ A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAKDSIIN-ADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|417894858|ref|ZP_12538865.1| ribokinase [Staphylococcus aureus subsp. aureus 21235]
gi|341842159|gb|EGS83591.1| ribokinase [Staphylococcus aureus subsp. aureus 21235]
Length = 304
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKTHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|32472551|ref|NP_865545.1| ribokinase [Rhodopirellula baltica SH 1]
gi|32443787|emb|CAD73229.1| ribokinase [Rhodopirellula baltica SH 1]
Length = 314
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 147/305 (48%), Gaps = 16/305 (5%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVGSAN D+ RLP GET A + GGKGANQA A+L FV
Sbjct: 6 TRPKITVVGSANVDLTFRTPRLPVPGETFAGHSLHQGMGGKGANQAVVAARLGAEVAFVA 65
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+VG D DA G+ ++ KD PTG A +++ D +N II+V G N
Sbjct: 66 RVGNDGFATQAIDAYQTDGINTSFVQHSKDQ--PTGTAAILVDDDAENCIIVVAGANAEL 123
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQ 242
+ +V+ + +V+ Q E P ++ K AR+A V + AP +
Sbjct: 124 NADDVRSAK-DVIAFSDVVICQLETPVEAALEAFKLARAANVLTML----TPAPAELVSD 178
Query: 243 ELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEG 302
ELL+ D+ PN++E+ +TG ++ + A + + GV+QV + +G +G +
Sbjct: 179 ELLSLCDVCVPNKTEIAAITGCSVETQADCAAAAEQLRQRGVRQVALTMGGEGVLVLDRS 238
Query: 303 EKPIKQSIIPAA--RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGA 360
S+IPA+ + +DTTGAGD FT + AV EG S + A A++ V G
Sbjct: 239 ----GMSLIPASPVKAVDTTGAGDAFTGALAVSLAEGMSLADAATRAGIVAAISVTRVGT 294
Query: 361 IPSMP 365
S P
Sbjct: 295 QTSFP 299
>gi|260221344|emb|CBA29812.1| hypothetical protein Csp_A14030 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 313
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 156/307 (50%), Gaps = 21/307 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHP-TYFVGQVG 128
++V GSAN D V +P GETV + QT GGKGANQA A+ T+ + +G
Sbjct: 5 ILVAGSANLDFVVRAHHIPAPGETVLGRDFQTFPGGKGANQAVASARAGGAITHMLLGLG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
+DA + ++L GV+ M++V+ PTG A + + D +N+I + G N+ P+
Sbjct: 65 QDAFATPLENSLQSAGVQ---MHIVRTPDHPTGTAFICVSDDAENAITVAPGANVELRPD 121
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
L + +LLQ E P A+AAR+ GV V+ +A A +P ELL +
Sbjct: 122 H-----LPSLAGFTHLLLQLETPLDTVTAFARAARAQGVQVVLNAAPARA-LPPELLAHV 175
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKC-HKMGVQQVLVKLGAKGSALFVEGEKPIK 307
D+L NE EL ++G ++ C ++ V V+V LG +GS G +
Sbjct: 176 DVLVVNEGELAVVSGH--------EGSIADCLARVAVPNVVVTLGHRGSCARHNGAFAV- 226
Query: 308 QSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
QS P + V DTTGAGDTF S +G+ + LRFA+AA+++ GA S+P+
Sbjct: 227 QSAFPISPV-DTTGAGDTFCGSLVAALSQGQPLADALRFASAASAIACTRWGAQSSIPET 285
Query: 368 KSVLNLL 374
V LL
Sbjct: 286 TEVEALL 292
>gi|239834603|ref|ZP_04682931.1| ribokinase [Ochrobactrum intermedium LMG 3301]
gi|444308985|ref|ZP_21144626.1| ribokinase [Ochrobactrum intermedium M86]
gi|239822666|gb|EEQ94235.1| ribokinase [Ochrobactrum intermedium LMG 3301]
gi|443487754|gb|ELT50515.1| ribokinase [Ochrobactrum intermedium M86]
Length = 307
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 161/307 (52%), Gaps = 6/307 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ + GS N D+ + LP+ G+TV A GGKGANQA AKL FVG VG
Sbjct: 3 IFIFGSVNVDVSARMAALPRPGQTVNASGYGIGLGGKGANQAVAVAKLGGDIRFVGAVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA G+L + G+ + + V+ GV TG A++ ++ GQN+I + G N + W
Sbjct: 63 DAFGELAVKQMQEFGLNTESVRVID--GVDTGMAIIQVEEAGQNTIAVCAGAN-ARWSAA 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGM-DAPIPQELLNFI 248
D + +A I LLQRE+P N+ VAKAAR+AG V+ D + DA +L+
Sbjct: 120 DIDAYAADIARAKITLLQREVPHEANLAVAKAARAAGGSVLLDPAPVGDAGRMADLIALS 179
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+SPNE+E +TG+ A + G + V+VKLG++G+ L E +K
Sbjct: 180 DIISPNETEAAEITGIEPTDLASAEAAARNLLERGPKMVIVKLGSRGALLVTADE--VKH 237
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
V+DT AGD+F FAV + + +S +C+R+ +AA ++ V GA + P
Sbjct: 238 FAPFKVDVVDTVAAGDSFNGGFAVAYSQDRSLHDCVRYGSAAGAVAVTRPGAGSAAPTAA 297
Query: 369 SVLNLLQ 375
V LLQ
Sbjct: 298 EVAALLQ 304
>gi|107022683|ref|YP_621010.1| ribokinase [Burkholderia cenocepacia AU 1054]
gi|116689632|ref|YP_835255.1| ribokinase [Burkholderia cenocepacia HI2424]
gi|105892872|gb|ABF76037.1| Ribokinase [Burkholderia cenocepacia AU 1054]
gi|116647721|gb|ABK08362.1| ribokinase [Burkholderia cenocepacia HI2424]
Length = 311
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 139/303 (45%), Gaps = 4/303 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D + TG A++++ QN+I+IV G N +
Sbjct: 71 DAHGAALRAGLEAEGI--DCAGLATSASASTGVALIVVDDGSQNAIVIVAGGNGEVTTDT 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 IARHE-AALAAADVLICQLETPPDTVFAALSAGRRLGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+ + A G + VLV LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTGLRVRDPAEAEAAARALQAGGARNVLVTLGARG-VLALTADGTARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF F+ G + +RFA AA+L V GA PS+P R
Sbjct: 247 PAPVVQAVDTTAAGDTFIGGFSARLAAGADVDTAIRFAQCAAALSVTRAGAQPSIPTRSE 306
Query: 370 VLN 372
+ +
Sbjct: 307 LAD 309
>gi|75906477|ref|YP_320773.1| ribokinase [Anabaena variabilis ATCC 29413]
gi|75700202|gb|ABA19878.1| Ribokinase [Anabaena variabilis ATCC 29413]
Length = 307
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 157/312 (50%), Gaps = 17/312 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V GS N D+ +LP GET+ + + GGKGANQA AKL PT VG+VG
Sbjct: 3 IIVFGSINIDLVATAPKLPIAGETLLGEDFFKVPGGKGANQAVAVAKLGVPTQMVGRVGA 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
G + + L GV+ D N+ D +G A++ + DG+N I+++ G N +
Sbjct: 63 HGFGAELMENLQDAGVQTD--NIFVDETASSGVAMITVAHDGENQIVVIPGAN-----GR 115
Query: 190 FGDEDLE----VVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
D+E ++ A +LLQ EIP + I A+AARS + VI D + +P EL
Sbjct: 116 VNQADVERLSYILPTATALLLQLEIPITAVIAAAQAARSNNITVILDPAPAPSDLPAELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE E G++ G P D E +A + GV+ +VKLGAKG + E
Sbjct: 176 PLIDIITPNEVEAGQIVGFPVDGEEAARKAAGVLLQRGVKSAIVKLGAKGVVCATDKET- 234
Query: 306 IKQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+PA V +DT AGD F A G S + + + AAA +L GA S
Sbjct: 235 ---FFVPAFFVDTVDTVAAGDAFNGGLATALYSGLSLHQAVIWGAAAGALAATKLGAQTS 291
Query: 364 MPDRKSVLNLLQ 375
+PD+ + L+
Sbjct: 292 LPDKLTFEAFLK 303
>gi|251797972|ref|YP_003012703.1| ribokinase [Paenibacillus sp. JDR-2]
gi|247545598|gb|ACT02617.1| ribokinase [Paenibacillus sp. JDR-2]
Length = 292
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 161/303 (53%), Gaps = 20/303 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS++ D+ V R P GETV + T+ GGKGANQA A+L +G+VG+
Sbjct: 4 IIVVGSSSVDLVVTAARRPGAGETVLGEGFATVPGGKGANQAIAAARLGAEVTMIGRVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I + V Y+ V T H V+ ++G NSI++V N P
Sbjct: 64 DVYGQEILNNFRMNNVFNGYVEPVTHMASGTAHIVL---AEGDNSIVVVPAANNEVTP-A 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
F ++ E KA I+L+Q+EIP+ V + + +P++ + P+ +EL+
Sbjct: 120 FIEKCKEAFHKADILLIQQEIPEETVAYVGELCKEMQLPLLLNPAPAR-PLTEELIANAT 178
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L+PNE E L P S +SEA+ + ++ + G++G F +G++ +
Sbjct: 179 YLTPNEHEARVL--FPGLS---LSEALRRYP----NKLFITEGSRGVRFF-DGQQEV--- 225
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++P+ +V +DTTGAGDTF A+FAV EG+ +C++FA AASL V GA MP R
Sbjct: 226 LVPSYKVEAVDTTGAGDTFNAAFAVALAEGRPIRDCVKFANRAASLSVTKFGAQGGMPIR 285
Query: 368 KSV 370
+ V
Sbjct: 286 REV 288
>gi|336233749|ref|YP_004586365.1| ribokinase [Geobacillus thermoglucosidasius C56-YS93]
gi|335360604|gb|AEH46284.1| ribokinase [Geobacillus thermoglucosidasius C56-YS93]
Length = 295
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 156/312 (50%), Gaps = 24/312 (7%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVGS N D+ R P GET+ + + GGKGANQA A+L + +G
Sbjct: 2 TKPVITVVGSINMDLVTIASRFPSQGETILGEEFHLIPGGKGANQAVAAARLGAEVHMIG 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
VG D G + +L GV +D + V G TG A + + S+ N II+V G N +
Sbjct: 62 AVGTDPFGNELLRSLEREGVHIDNVKPVTHKG--TGIASITI-SEQDNRIIVVPGANHAL 118
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
PE D E++ K+ + +LQ EIP SV + A+ V VI + P+PQ+L+
Sbjct: 119 RPEDI-DRYEEIIAKSDVCVLQLEIPLSVVERAVFLAKKHHVRVILNPAPAQ-PLPQKLI 176
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
D L+PNE E + +EQ+ V +V+V GA+G + +G
Sbjct: 177 EQADFLTPNEHEREII-------FEQVDVDVF------ADKVIVTEGARGVTIRKDG--- 220
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
KQ IP V+DTTGAGDTF + AV +G S E+ RFA AAA+L V GA
Sbjct: 221 -KQVHIPGFCVPVVDTTGAGDTFNGALAVALSKGMSLEDACRFANAAAALSVTKLGAQGG 279
Query: 364 MPDRKSVLNLLQ 375
MP + V L+
Sbjct: 280 MPTEEEVERFLR 291
>gi|432462254|ref|ZP_19704392.1| ribokinase [Escherichia coli KTE204]
gi|433069589|ref|ZP_20256363.1| ribokinase [Escherichia coli KTE128]
gi|430987092|gb|ELD03640.1| ribokinase [Escherichia coli KTE204]
gi|431580257|gb|ELI52820.1| ribokinase [Escherichia coli KTE128]
Length = 404
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 8/305 (2%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N DI + RLP +GE++ A GGKG NQA + YF+ +VG D
Sbjct: 96 VIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDH 155
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPEKF 190
+ ++ + + K+ TG A +++ + G N I I G NM+ ++
Sbjct: 156 FSDYAINFMNSSKIYKSIIYQTKE--TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEI 213
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
+ E + + ++LLQ E + Q A+ +PVI + + I EL+ +D
Sbjct: 214 TIQK-EAIINSDVILLQLETNYTALQQAITLAQKNSIPVIINPAPYN-DIVNELIQDVDY 271
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
++PNE+E G L+G+ E A H GV+ ++ LG+KGS F +G+K I
Sbjct: 272 ITPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAF-DGKKFIHSPA 330
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
PA V +T GAGD F S A G +GKS E L +A+A ASL V+ A MP+ +SV
Sbjct: 331 FPAV-VKNTAGAGDAFNGSLASGLAKGKSLESALCYASAFASLAVETSNA-SDMPEHESV 388
Query: 371 LNLLQ 375
++ +Q
Sbjct: 389 IHRIQ 393
>gi|21281973|ref|NP_645059.1| ribokinase [Staphylococcus aureus subsp. aureus MW2]
gi|49485148|ref|YP_042369.1| ribokinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|297209221|ref|ZP_06925620.1| ribokinase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300911219|ref|ZP_07128668.1| ribokinase [Staphylococcus aureus subsp. aureus TCH70]
gi|418933254|ref|ZP_13487080.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|418987227|ref|ZP_13534902.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|448742426|ref|ZP_21724369.1| ribokinase [Staphylococcus aureus KT/314250]
gi|448743686|ref|ZP_21725593.1| ribokinase [Staphylococcus aureus KT/Y21]
gi|21203409|dbj|BAB94109.1| probable ribokinase [Staphylococcus aureus subsp. aureus MW2]
gi|49243591|emb|CAG42015.1| putative ribokinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|296886154|gb|EFH25088.1| ribokinase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300887398|gb|EFK82594.1| ribokinase [Staphylococcus aureus subsp. aureus TCH70]
gi|377720642|gb|EHT44797.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377773428|gb|EHT97174.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|445546810|gb|ELY15093.1| ribokinase [Staphylococcus aureus KT/314250]
gi|445562971|gb|ELY19135.1| ribokinase [Staphylococcus aureus KT/Y21]
Length = 304
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKSTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|433130536|ref|ZP_20315978.1| ribokinase [Escherichia coli KTE163]
gi|431646414|gb|ELJ13908.1| ribokinase [Escherichia coli KTE163]
Length = 404
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 8/305 (2%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N DI + RLP +GE++ A GGKG NQA + YF+ +VG D
Sbjct: 96 VIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDH 155
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPEKF 190
+ ++ + + K+ TG A +++ + G N I I G NM+ ++
Sbjct: 156 FSDYAINFMNSSKIYKSIIYQTKE--TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEI 213
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
+ E + + ++LLQ E + Q A+ +PVI + + I EL+ +D
Sbjct: 214 TIQK-EAIINSDVILLQLETNYTALQQAITLAQKNSIPVIINPAPYN-DIVNELIQDVDY 271
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
++PNE+E G L+G+ E A H GV+ ++ LG+KGS F +G+K I
Sbjct: 272 ITPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAF-DGKKFIHSPA 330
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
PA V +T GAGD F S A G +GKS E L +A+A ASL V+ A MP+ +SV
Sbjct: 331 FPAV-VKNTAGAGDAFNGSLASGLAKGKSLESALCYASAFASLAVETSNA-SDMPEHESV 388
Query: 371 LNLLQ 375
++ +Q
Sbjct: 389 IHRIQ 393
>gi|170732935|ref|YP_001764882.1| ribokinase [Burkholderia cenocepacia MC0-3]
gi|169816177|gb|ACA90760.1| ribokinase [Burkholderia cenocepacia MC0-3]
Length = 311
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 139/303 (45%), Gaps = 4/303 (1%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ V RLP GET+A AGGKG NQA A+L +G VG
Sbjct: 11 VTVVGSLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGA 70
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ D + TG A++++ QN+I+IV G N +
Sbjct: 71 DAHGAALRAGLEAEGI--DCTGLATSASASTGVALIVVDDGSQNAIVIVAGGNGEVTTDT 128
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+ + A +++ Q E P A R G V+ + AP+P L +D
Sbjct: 129 IAGHE-AALAAADVLICQLETPPDTVFAALSAGRRLGRTVVLNPAPAVAPLPDGWLPLVD 187
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
L PNE E LTG+ + A G + VLV LGA+G L + + +
Sbjct: 188 YLIPNEVEAAALTGLRVRDPAEAEAAARALQAGGARNVLVTLGARG-VLALTADGTARHY 246
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKS 369
P + +DTT AGDTF F+ G + +RFA AA+L V GA PS+P R
Sbjct: 247 PAPVVQAVDTTAAGDTFIGGFSARLAAGADVDTAIRFAQRAAALSVTRAGAQPSIPTRSE 306
Query: 370 VLN 372
+ +
Sbjct: 307 LAD 309
>gi|347543109|ref|YP_004857747.1| ribokinase [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986146|dbj|BAK81821.1| ribokinase [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 309
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 164/305 (53%), Gaps = 20/305 (6%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ ++I+ +PKVGET+ +K+ + +AGGKGANQA + + ++G+
Sbjct: 4 ICVIGSLNMDLVLKINDIPKVGETILSKSYEKIAGGKGANQAIAAKRCGADVSMIAKIGK 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NGK++ + L + D + KD PTG A++M+ +G NSI++V G+NM+ ++
Sbjct: 64 DENGKILREKLKEENI--DVTCIFKDDQDPTGLALIMVNKNGNNSIVVVPGSNMNITDKE 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
D + + + I++ Q E +++ ++ + A+ I + AP I ++LL
Sbjct: 122 I-DNSISKIINSDILIAQFETNENMTLKSFQKAKEFNKTTILNP----APAKKIDEKLLK 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
DI+ PNE+E LTG+ +S + +A GV+ ++ LG KG AL V G
Sbjct: 177 LTDIIIPNETEAEILTGIKINSIDDAKKAGEFFLNKGVKFSVITLGEKG-ALIV-GRNF- 233
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLR----FAAAAASLCVQVKGA 360
++ A +V +DTT AGD+F + + E L+ F +S+ VQ KGA
Sbjct: 234 -HELVHAFKVNAVDTTAAGDSFIGALSSKLNFKNLNRETLKDAVSFGNKVSSITVQRKGA 292
Query: 361 IPSMP 365
PS+P
Sbjct: 293 QPSIP 297
>gi|15923258|ref|NP_370792.1| ribokinase [Staphylococcus aureus subsp. aureus Mu50]
gi|15925971|ref|NP_373504.1| ribokinase [Staphylococcus aureus subsp. aureus N315]
gi|148266693|ref|YP_001245636.1| ribokinase [Staphylococcus aureus subsp. aureus JH9]
gi|150392733|ref|YP_001315408.1| ribokinase [Staphylococcus aureus subsp. aureus JH1]
gi|156978598|ref|YP_001440857.1| ribokinase [Staphylococcus aureus subsp. aureus Mu3]
gi|253733709|ref|ZP_04867874.1| ribokinase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005065|ref|ZP_05143666.2| ribokinase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257793920|ref|ZP_05642899.1| ribokinase [Staphylococcus aureus A9781]
gi|258408673|ref|ZP_05680958.1| ribokinase [Staphylococcus aureus A9763]
gi|258421265|ref|ZP_05684192.1| ribokinase [Staphylococcus aureus A9719]
gi|258439013|ref|ZP_05690104.1| ribokinase [Staphylococcus aureus A9299]
gi|258444248|ref|ZP_05692582.1| ribokinase [Staphylococcus aureus A8115]
gi|258447128|ref|ZP_05695278.1| ribokinase [Staphylococcus aureus A6300]
gi|258448586|ref|ZP_05696699.1| ribokinase [Staphylococcus aureus A6224]
gi|258455822|ref|ZP_05703777.1| ribokinase [Staphylococcus aureus A5937]
gi|269201916|ref|YP_003281185.1| ribokinase [Staphylococcus aureus subsp. aureus ED98]
gi|282893425|ref|ZP_06301658.1| ribokinase [Staphylococcus aureus A8117]
gi|282926377|ref|ZP_06334009.1| ribokinase [Staphylococcus aureus A10102]
gi|295405538|ref|ZP_06815348.1| ribokinase [Staphylococcus aureus A8819]
gi|296275768|ref|ZP_06858275.1| ribokinase [Staphylococcus aureus subsp. aureus MR1]
gi|297244876|ref|ZP_06928756.1| ribokinase [Staphylococcus aureus A8796]
gi|384546473|ref|YP_005735726.1| ribokinase [Staphylococcus aureus subsp. aureus ED133]
gi|384863623|ref|YP_005748982.1| ribokinase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387149453|ref|YP_005741017.1| Ribokinase [Staphylococcus aureus 04-02981]
gi|387779444|ref|YP_005754242.1| putative ribokinase [Staphylococcus aureus subsp. aureus LGA251]
gi|415692318|ref|ZP_11454324.1| probable ribokinase [Staphylococcus aureus subsp. aureus CGS03]
gi|417652112|ref|ZP_12301868.1| ribokinase [Staphylococcus aureus subsp. aureus 21172]
gi|417803175|ref|ZP_12450221.1| ribokinase [Staphylococcus aureus subsp. aureus 21318]
gi|417894021|ref|ZP_12538044.1| ribokinase [Staphylococcus aureus subsp. aureus 21201]
gi|417899526|ref|ZP_12543429.1| ribokinase [Staphylococcus aureus subsp. aureus 21259]
gi|418312837|ref|ZP_12924343.1| ribokinase [Staphylococcus aureus subsp. aureus 21334]
gi|418423452|ref|ZP_12996607.1| ribokinase [Staphylococcus aureus subsp. aureus VRS1]
gi|418426401|ref|ZP_12999435.1| ribokinase [Staphylococcus aureus subsp. aureus VRS2]
gi|418429333|ref|ZP_13002270.1| ribokinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418432226|ref|ZP_13005032.1| ribokinase [Staphylococcus aureus subsp. aureus VRS4]
gi|418435939|ref|ZP_13007762.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS5]
gi|418438836|ref|ZP_13010562.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS6]
gi|418441819|ref|ZP_13013442.1| ribokinase [Staphylococcus aureus subsp. aureus VRS7]
gi|418444939|ref|ZP_13016436.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS8]
gi|418447886|ref|ZP_13019297.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS9]
gi|418450718|ref|ZP_13022063.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS10]
gi|418453728|ref|ZP_13025007.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|418456637|ref|ZP_13027855.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|418567787|ref|ZP_13132151.1| ribokinase [Staphylococcus aureus subsp. aureus 21272]
gi|418599862|ref|ZP_13163338.1| ribokinase [Staphylococcus aureus subsp. aureus 21343]
gi|418639135|ref|ZP_13201405.1| ribokinase [Staphylococcus aureus subsp. aureus IS-3]
gi|418652437|ref|ZP_13214404.1| ribokinase [Staphylococcus aureus subsp. aureus IS-99]
gi|418662275|ref|ZP_13223827.1| ribokinase [Staphylococcus aureus subsp. aureus IS-122]
gi|418877177|ref|ZP_13431417.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418879978|ref|ZP_13434200.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418882924|ref|ZP_13437126.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885552|ref|ZP_13439707.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|418893749|ref|ZP_13447852.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|418913520|ref|ZP_13467494.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418919045|ref|ZP_13472993.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|418930453|ref|ZP_13484303.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|418990183|ref|ZP_13537846.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|419784010|ref|ZP_14309785.1| ribokinase [Staphylococcus aureus subsp. aureus IS-M]
gi|424772804|ref|ZP_18199892.1| ribokinase [Staphylococcus aureus subsp. aureus CM05]
gi|443635377|ref|ZP_21119506.1| ribokinase [Staphylococcus aureus subsp. aureus 21236]
gi|13700184|dbj|BAB41482.1| probable ribokinase [Staphylococcus aureus subsp. aureus N315]
gi|14246035|dbj|BAB56430.1| probable ribokinase [Staphylococcus aureus subsp. aureus Mu50]
gi|147739762|gb|ABQ48060.1| ribokinase [Staphylococcus aureus subsp. aureus JH9]
gi|149945185|gb|ABR51121.1| ribokinase [Staphylococcus aureus subsp. aureus JH1]
gi|156720733|dbj|BAF77150.1| probable ribokinase [Staphylococcus aureus subsp. aureus Mu3]
gi|253728306|gb|EES97035.1| ribokinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257787892|gb|EEV26232.1| ribokinase [Staphylococcus aureus A9781]
gi|257840682|gb|EEV65141.1| ribokinase [Staphylococcus aureus A9763]
gi|257842689|gb|EEV67111.1| ribokinase [Staphylococcus aureus A9719]
gi|257847889|gb|EEV71885.1| ribokinase [Staphylococcus aureus A9299]
gi|257850507|gb|EEV74455.1| ribokinase [Staphylococcus aureus A8115]
gi|257854141|gb|EEV77094.1| ribokinase [Staphylococcus aureus A6300]
gi|257858217|gb|EEV81105.1| ribokinase [Staphylococcus aureus A6224]
gi|257862034|gb|EEV84807.1| ribokinase [Staphylococcus aureus A5937]
gi|262074206|gb|ACY10179.1| ribokinase [Staphylococcus aureus subsp. aureus ED98]
gi|282591706|gb|EFB96777.1| ribokinase [Staphylococcus aureus A10102]
gi|282764111|gb|EFC04238.1| ribokinase [Staphylococcus aureus A8117]
gi|285815992|gb|ADC36479.1| Ribokinase [Staphylococcus aureus 04-02981]
gi|294969613|gb|EFG45632.1| ribokinase [Staphylococcus aureus A8819]
gi|297178393|gb|EFH37640.1| ribokinase [Staphylococcus aureus A8796]
gi|298693525|gb|ADI96747.1| ribokinase [Staphylococcus aureus subsp. aureus ED133]
gi|312828790|emb|CBX33632.1| ribokinase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130247|gb|EFT86235.1| probable ribokinase [Staphylococcus aureus subsp. aureus CGS03]
gi|329725942|gb|EGG62421.1| ribokinase [Staphylococcus aureus subsp. aureus 21172]
gi|334273393|gb|EGL91743.1| ribokinase [Staphylococcus aureus subsp. aureus 21318]
gi|341844692|gb|EGS85901.1| ribokinase [Staphylococcus aureus subsp. aureus 21259]
gi|341853528|gb|EGS94409.1| ribokinase [Staphylococcus aureus subsp. aureus 21201]
gi|344176546|emb|CCC87002.1| putative ribokinase [Staphylococcus aureus subsp. aureus LGA251]
gi|365237314|gb|EHM78164.1| ribokinase [Staphylococcus aureus subsp. aureus 21334]
gi|371982432|gb|EHO99592.1| ribokinase [Staphylococcus aureus subsp. aureus 21272]
gi|374395935|gb|EHQ67190.1| ribokinase [Staphylococcus aureus subsp. aureus 21343]
gi|375019761|gb|EHS13313.1| ribokinase [Staphylococcus aureus subsp. aureus IS-3]
gi|375021792|gb|EHS15287.1| ribokinase [Staphylococcus aureus subsp. aureus IS-99]
gi|375036657|gb|EHS29722.1| ribokinase [Staphylococcus aureus subsp. aureus IS-122]
gi|377697872|gb|EHT22225.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377700266|gb|EHT24605.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377717150|gb|EHT41327.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377717467|gb|EHT41643.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377724183|gb|EHT48300.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377728625|gb|EHT52725.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|377733736|gb|EHT57777.1| ribokinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377759563|gb|EHT83444.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377768097|gb|EHT91882.1| ribokinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|383364214|gb|EID41528.1| ribokinase [Staphylococcus aureus subsp. aureus IS-M]
gi|387721443|gb|EIK09305.1| ribokinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387721817|gb|EIK09669.1| ribokinase [Staphylococcus aureus subsp. aureus VRS2]
gi|387723089|gb|EIK10851.1| ribokinase [Staphylococcus aureus subsp. aureus VRS1]
gi|387728363|gb|EIK15852.1| ribokinase [Staphylococcus aureus subsp. aureus VRS4]
gi|387730021|gb|EIK17432.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS5]
gi|387731990|gb|EIK19240.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS6]
gi|387739038|gb|EIK26051.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS8]
gi|387740039|gb|EIK27011.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS9]
gi|387740463|gb|EIK27412.1| ribokinase [Staphylococcus aureus subsp. aureus VRS7]
gi|387747466|gb|EIK34173.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS10]
gi|387748942|gb|EIK35601.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|387749464|gb|EIK36088.1| rbsK- ribokinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|402347473|gb|EJU82508.1| ribokinase [Staphylococcus aureus subsp. aureus CM05]
gi|408422778|emb|CCJ10189.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408424766|emb|CCJ12153.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408426755|emb|CCJ14118.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408428743|emb|CCJ25908.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408430731|emb|CCJ18046.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408432725|emb|CCJ20010.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408434714|emb|CCJ21974.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|408436699|emb|CCJ23942.1| Probable ribokinase [Staphylococcus aureus subsp. aureus ST228]
gi|443409394|gb|ELS67889.1| ribokinase [Staphylococcus aureus subsp. aureus 21236]
Length = 304
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|386728047|ref|YP_006194430.1| ribokinase [Staphylococcus aureus subsp. aureus 71193]
gi|387601572|ref|YP_005733093.1| ribokinase [Staphylococcus aureus subsp. aureus ST398]
gi|404477590|ref|YP_006709020.1| ribokinase [Staphylococcus aureus 08BA02176]
gi|418311636|ref|ZP_12923158.1| ribokinase [Staphylococcus aureus subsp. aureus 21331]
gi|418979193|ref|ZP_13526991.1| Ribokinase [Staphylococcus aureus subsp. aureus DR10]
gi|283469510|emb|CAQ48721.1| ribokinase [Staphylococcus aureus subsp. aureus ST398]
gi|365233747|gb|EHM74690.1| ribokinase [Staphylococcus aureus subsp. aureus 21331]
gi|379993131|gb|EIA14579.1| Ribokinase [Staphylococcus aureus subsp. aureus DR10]
gi|384229340|gb|AFH68587.1| Ribokinase [Staphylococcus aureus subsp. aureus 71193]
gi|404439079|gb|AFR72272.1| putative ribokinase [Staphylococcus aureus 08BA02176]
Length = 304
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEEKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q EIP I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEIPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|220931303|ref|YP_002508211.1| Ribokinase [Halothermothrix orenii H 168]
gi|219992613|gb|ACL69216.1| Ribokinase [Halothermothrix orenii H 168]
Length = 306
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 157/310 (50%), Gaps = 16/310 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ V+ ++ P+ GETV + + + GGKGANQA KL F+G G+
Sbjct: 5 ILVIGSLNMDLIVQTEKYPRKGETVPGENFKQVPGGKGANQALTAGKLGGQVRFIGSCGK 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE- 188
D G + + L GV +D + V+ TG A++ ++ +G N II V G N P+
Sbjct: 65 DEYGTTLLNNLKNGGVIVDDILRVEKN---TGIAMITIEKEGSNRIIYVKGANEYVTPDV 121
Query: 189 --KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
K D KKA I+L+Q EIP I+ + A+ + VI D + +P+++
Sbjct: 122 VMKMEDR----FKKASILLIQMEIPLESVIKAVELAKKYQMKVILDPSPVQG-LPEKIFP 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID + PNE EL L E+ ++ ++ K+G V+V G G + + E +
Sbjct: 177 LIDYILPNEIELDELVKNGCQIEEEKAKHLL---KLGTNNVIVTKGKNGVSHYYEDKVAT 233
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+S + +DTT AGD F S A G +G S E+ ++F+ A+ V GA S+P
Sbjct: 234 YESY--HVKAVDTTAAGDAFAGSLAYGLSQGWSLEKTIKFSNLVAANSVTKLGAQSSLPT 291
Query: 367 RKSVLNLLQY 376
+ V+ ++
Sbjct: 292 YQEVMKFAKH 301
>gi|421609757|ref|ZP_16050945.1| ribokinase [Rhodopirellula baltica SH28]
gi|408499530|gb|EKK04001.1| ribokinase [Rhodopirellula baltica SH28]
Length = 310
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 146/302 (48%), Gaps = 10/302 (3%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVGSAN D+ RLP GET A + GGKGANQA A+L FV
Sbjct: 2 TRPKITVVGSANVDLTFRTPRLPVPGETFAGHSLHQGMGGKGANQAVVAARLGAEVAFVA 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+VG D DA G+ ++ KD PTG A +++ D +N II+V G N
Sbjct: 62 RVGNDGFATQAIDAYQTDGINTSFVQHSKDQ--PTGTAAILVDDDAENCIIVVAGANAEL 119
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
+ +V+ + +V+ Q E P ++ K AR+A V + + + ELL
Sbjct: 120 NADDVRSAK-DVIAFSDVVICQLETPVEAALEAFKLARAANVLTMLTPAPAEL-VSDELL 177
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ D+ PN++E+ +TG ++ + A + + GV+QV + +G +G +
Sbjct: 178 SLCDVCVPNKTEIAAITGCSVETQADCAAAAEQLRQRGVRQVALTMGGEGVLVLDRS--- 234
Query: 306 IKQSIIPAA--RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
S+IPA+ + +DTTGAGD FT + AV EG S + A A++ V G S
Sbjct: 235 -GMSLIPASPVKAVDTTGAGDAFTGALAVSLAEGMSLADAATRAGIVAAISVTRVGTQTS 293
Query: 364 MP 365
P
Sbjct: 294 FP 295
>gi|300900121|ref|ZP_07118314.1| putative ribokinase [Escherichia coli MS 198-1]
gi|300954870|ref|ZP_07167292.1| putative ribokinase [Escherichia coli MS 175-1]
gi|331642613|ref|ZP_08343748.1| regulatory protein, DeoR family [Escherichia coli H736]
gi|331683662|ref|ZP_08384258.1| regulatory protein, DeoR family [Escherichia coli H299]
gi|417290739|ref|ZP_12078020.1| putative ribokinase [Escherichia coli B41]
gi|417634910|ref|ZP_12285124.1| deoR-like helix-turn-helix domain protein [Escherichia coli
STEC_S1191]
gi|422353208|ref|ZP_16433969.1| putative ribokinase [Escherichia coli MS 117-3]
gi|432485748|ref|ZP_19727664.1| ribokinase [Escherichia coli KTE212]
gi|432704772|ref|ZP_19939874.1| ribokinase [Escherichia coli KTE171]
gi|433135239|ref|ZP_20320592.1| ribokinase [Escherichia coli KTE166]
gi|433173856|ref|ZP_20358388.1| ribokinase [Escherichia coli KTE232]
gi|300318165|gb|EFJ67949.1| putative ribokinase [Escherichia coli MS 175-1]
gi|300356335|gb|EFJ72205.1| putative ribokinase [Escherichia coli MS 198-1]
gi|324018786|gb|EGB88005.1| putative ribokinase [Escherichia coli MS 117-3]
gi|331039411|gb|EGI11631.1| regulatory protein, DeoR family [Escherichia coli H736]
gi|331078614|gb|EGI49816.1| regulatory protein, DeoR family [Escherichia coli H299]
gi|345388401|gb|EGX18212.1| deoR-like helix-turn-helix domain protein [Escherichia coli
STEC_S1191]
gi|386253061|gb|EIJ02751.1| putative ribokinase [Escherichia coli B41]
gi|431016145|gb|ELD29692.1| ribokinase [Escherichia coli KTE212]
gi|431243001|gb|ELF37390.1| ribokinase [Escherichia coli KTE171]
gi|431657320|gb|ELJ24286.1| ribokinase [Escherichia coli KTE166]
gi|431693041|gb|ELJ58460.1| ribokinase [Escherichia coli KTE232]
Length = 404
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 153/305 (50%), Gaps = 8/305 (2%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N DI + RLP +GE++ A GGKG NQA + YF+ +VG D
Sbjct: 96 VIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDH 155
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVML-QSDGQNSIIIVGGTNMSCWPEKF 190
+ ++ + + K+ TG A +++ + G N I I G NM+ ++
Sbjct: 156 FSDYAINFMNSSKIYKSIIYQTKE--TQTGTATILVNEGTGDNVIAIYPGANMTMSSDEI 213
Query: 191 GDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDI 250
+ E + + ++LLQ E + Q A+ +PVI + + I EL+ +D
Sbjct: 214 TIQK-EAIINSDVILLQLETNYTALQQAITLAQKNSIPVIINPAPYN-DIVNELIQDVDY 271
Query: 251 LSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI 310
++PNE+E G L+G+ E A H GV+ ++ LG+KGS F +G+K I
Sbjct: 272 ITPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAF-DGKKFIHSPA 330
Query: 311 IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
PA V +T GAGD F S A G +GKS E L +A+A ASL V+ A MP+ +SV
Sbjct: 331 FPAV-VKNTAGAGDAFNGSLASGLAKGKSLESALCYASAFASLAVETSNA-SDMPEHESV 388
Query: 371 LNLLQ 375
++ +Q
Sbjct: 389 IHRIQ 393
>gi|304397994|ref|ZP_07379869.1| ribokinase [Pantoea sp. aB]
gi|304354280|gb|EFM18652.1| ribokinase [Pantoea sp. aB]
Length = 309
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 153/307 (49%), Gaps = 8/307 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
L V+GS N D + + P+ GETV + Q GGKGANQA + F+ VG
Sbjct: 7 LAVLGSINADHILNLAHFPRPGETVIGQNYQIAFGGKGANQAVAAGRAGADIAFIACVGA 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK I + L+ + + VV+ G TG A++ + DG+N+I I G N + P+
Sbjct: 67 DDMGKRIREQLTQDNIDTTPVEVVE--GESTGVAMIFVNGDGENNIGIYSGANAALTPDC 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
V+ A +L+Q E P + A AR VI + + + ELL ID
Sbjct: 125 VARHQ-HVIADADALLMQLESPLESVLAAATLARQHHTQVILNPAPATS-LSDELLALID 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E LTG+ +S E + A H G+ VL+ LG +G L GE Q
Sbjct: 183 IITPNETEAESLTGIAVNSDEDAARAAEVLHAKGIGTVLITLGRRGVWLSERGE---GQR 239
Query: 310 IIP-AARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
I + + IDT AGDTF +F +E K + +RFA AAA++ V GA PS+P R
Sbjct: 240 IAGFSVKAIDTIAAGDTFNGAFITARLEQKPMYDAVRFAHAAAAIAVTRPGAQPSVPWRT 299
Query: 369 SVLNLLQ 375
+ + LQ
Sbjct: 300 EIDDFLQ 306
>gi|157373128|ref|YP_001481117.1| ribokinase [Serratia proteamaculans 568]
gi|157324892|gb|ABV43989.1| ribokinase [Serratia proteamaculans 568]
Length = 318
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 160/311 (51%), Gaps = 16/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + I++ P+ GETV K + GGKGANQA + F+ VG
Sbjct: 16 LVVLGSINADHILNIEQFPRPGETVIGKQYKVAFGGKGANQAVAAGRSGADIAFIACVGA 75
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I L+ R+D + TG A++ + ++G+N I I G N + P+
Sbjct: 76 DDIGERIRQQLATD--RIDTQPIEAIAENTTGVALIFVNAEGENVIGIDAGANAAVTPDY 133
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---IPQELLN 246
+V+ A +L+Q E P I A A+ VI + AP +P ELL
Sbjct: 134 LARYQQKVI-DADALLMQLESPLETVIAAAGLAKQHQTQVILNP----APARELPDELLA 188
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
ID+++PNE+E RLTG+ ++ + + A H G+ V++ LG++G L G
Sbjct: 189 MIDMITPNETEAQRLTGIAVNNDDDAARAAQALHDKGIATVIITLGSRGVWLSENG---- 244
Query: 307 KQSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
K ++P RV +DT AGDTF + +EGK+ + +RFA AAA++ V GA PS+
Sbjct: 245 KGKLVPGFRVKAVDTIAAGDTFNGALVTALLEGKTMADAVRFAHAAAAIAVTRPGAQPSV 304
Query: 365 PDRKSVLNLLQ 375
P R+ + LQ
Sbjct: 305 PWREEIDIFLQ 315
>gi|307154739|ref|YP_003890123.1| ribokinase [Cyanothece sp. PCC 7822]
gi|306984967|gb|ADN16848.1| ribokinase [Cyanothece sp. PCC 7822]
Length = 305
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 150/311 (48%), Gaps = 17/311 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D+ V++ LP GETV T GGKGAN A AKL P VGQVG
Sbjct: 3 VIVLGSINIDLVVQVSHLPHKGETVIGNNFFTACGGKGANGAVAIAKLGIPVSMVGQVGG 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + L GV + V+ + +G A +++ G N+I GG N
Sbjct: 63 DQFGETLLKGLQSAGV--NTQGVIINPDTHSGVASIVVDQHGDNTIACAGGAN-----SL 115
Query: 190 FGDEDLEVVKK----AGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
GD +++ K A +V L+ IP V + A AA +A VI D +P EL
Sbjct: 116 VGDAEIQQFKALLPGAKVVSLELGIPLDVVVAAASAASAADCIVILDPAPARNDLPDELY 175
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
IDI++PNE E +L G P E + A + + GV+ V+V LG++G+ E
Sbjct: 176 PLIDIITPNEVEASQLVGFPVIDPETATRAALILQQRGVKTVIVTLGSQGALCCSANET- 234
Query: 306 IKQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
+PA V+DT AGD F GKS E +++A A +L V GA S
Sbjct: 235 ---FFVPALSVSVVDTVAAGDAFNGGLVAALASGKSLPEAMQWATVAGALSVTQAGAQSS 291
Query: 364 MPDRKSVLNLL 374
+PDR S L L
Sbjct: 292 LPDRASFLQFL 302
>gi|253730617|ref|ZP_04864782.1| ribokinase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|385780552|ref|YP_005756723.1| ribokinase [Staphylococcus aureus subsp. aureus 11819-97]
gi|417654049|ref|ZP_12303777.1| ribokinase [Staphylococcus aureus subsp. aureus 21193]
gi|417795754|ref|ZP_12442972.1| ribokinase [Staphylococcus aureus subsp. aureus 21305]
gi|418314764|ref|ZP_12926232.1| ribokinase [Staphylococcus aureus subsp. aureus 21340]
gi|418573806|ref|ZP_13137987.1| ribokinase [Staphylococcus aureus subsp. aureus 21333]
gi|253725643|gb|EES94372.1| ribokinase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|329732608|gb|EGG68958.1| ribokinase [Staphylococcus aureus subsp. aureus 21193]
gi|334270685|gb|EGL89085.1| ribokinase [Staphylococcus aureus subsp. aureus 21305]
gi|364521541|gb|AEW64291.1| ribokinase [Staphylococcus aureus subsp. aureus 11819-97]
gi|365244886|gb|EHM85539.1| ribokinase [Staphylococcus aureus subsp. aureus 21340]
gi|371980871|gb|EHO98070.1| ribokinase [Staphylococcus aureus subsp. aureus 21333]
Length = 304
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|423000074|ref|ZP_16990828.1| ribokinase [Escherichia coli O104:H4 str. 09-7901]
gi|423003743|ref|ZP_16994489.1| ribokinase [Escherichia coli O104:H4 str. 04-8351]
gi|354869190|gb|EHF29600.1| ribokinase [Escherichia coli O104:H4 str. 04-8351]
gi|354873045|gb|EHF33422.1| ribokinase [Escherichia coli O104:H4 str. 09-7901]
Length = 404
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 151/304 (49%), Gaps = 6/304 (1%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N DI + RLP +GE++ A GGKG NQA + YF+ +VG D
Sbjct: 96 VIGSFNVDIISYLPRLPTIGESLLASNFIFSPGGKGCNQALAASFADTDVYFITKVGTDH 155
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
+ ++ + + K+ T +++ + G N I I G NM+ ++
Sbjct: 156 FSDYAINFMNSSKIYKSIIYQTKETQTETA-TILVNEGTGDNVIAIYPGANMTMSSDEIT 214
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
+ E + + I+LLQ E + Q A+ +PVI + + I EL+ +D +
Sbjct: 215 IQK-EAIINSDIILLQLETNYTALQQAITLAQKNSIPVIINPAPYN-DIVNELIQDVDYI 272
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSII 311
+PNE+E G L+G+ E A H GV+ ++ LG+KGS F +G+K I
Sbjct: 273 TPNETEAGLLSGIDVHDLESAKRAAEAIHNKGVKNTVITLGSKGSLAF-DGKKFIHSPAF 331
Query: 312 PAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSVL 371
PA V +T GAGD F S A G +GKS E L +A+A ASL V+ A MP+ +SV+
Sbjct: 332 PAV-VKNTAGAGDAFNGSLASGLAKGKSLESALCYASAFASLAVETSNA-SDMPEHESVI 389
Query: 372 NLLQ 375
+ +Q
Sbjct: 390 HRIQ 393
>gi|417304638|ref|ZP_12091649.1| ribokinase [Rhodopirellula baltica WH47]
gi|327539056|gb|EGF25689.1| ribokinase [Rhodopirellula baltica WH47]
Length = 310
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 66 TPPPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVG 125
T P + VVGSAN D+ RLP GET A + GGKGANQA A+L FV
Sbjct: 2 TRPKITVVGSANVDLTFRTPRLPVPGETFAGHSLHQGMGGKGANQAVVAARLGAEVAFVA 61
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+VG D DA G+ ++ KD PTG A +++ D +N II+V G N
Sbjct: 62 RVGNDGFATQAIDAYQTDGINTSFIQHSKDQ--PTGTAAILVDDDAENCIIVVAGANAEL 119
Query: 186 WPEKFGD--EDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAP---I 240
GD +V+ + +V+ Q E P ++ K AR+A V + AP +
Sbjct: 120 ---NAGDVRSAKDVIADSDVVICQLETPVESALEAFKLARAANVLTML----TPAPAELV 172
Query: 241 PQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFV 300
ELL+ D+ PN++E+ +TG ++ + A + + GV+QV + +G +G +
Sbjct: 173 SDELLSLCDVCVPNKTEIAAITGCSVETQADCAAAAEQLRQRGVRQVALTMGGEGVLVLD 232
Query: 301 EGEKPIKQSIIPAA--RVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVK 358
S+IPA+ + +DTTGAGD FT + AV EG S + A A++ V
Sbjct: 233 RS----GMSLIPASPVKAVDTTGAGDAFTGALAVSLAEGMSLADAATRAGIVAAISVTRV 288
Query: 359 GAIPSMP 365
G S P
Sbjct: 289 GTQTSFP 295
>gi|406838588|ref|ZP_11098182.1| ribokinase [Lactobacillus vini DSM 20605]
Length = 305
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 149/297 (50%), Gaps = 7/297 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ ++GS N D ++ P GET+ A + AGGKGANQA A+L T F+G+VG
Sbjct: 4 VTIIGSLNIDTTFKVTNFPLPGETIRAFNKSSAAGGKGANQAVAAARLGAKTTFIGKVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL G+ + + V G TG A ++L GQN II+ GG N +
Sbjct: 64 DQQGEFMIKALKQEGIDISGIKVEPATG--TGTADILLNEAGQNCIIVYGGANQTLTVAD 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
D ++ + V+ Q E P + I K A++AG I + +P ELL+ D
Sbjct: 122 LAGLDQQIA-ASDFVVAQFETPQAATIAAFKLAKAAGKMTILNPAPASEILP-ELLSLTD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I+ PNESE R+TG+ + ++ K +G+ + ++ LG++G + G + + +
Sbjct: 180 IIIPNESENQRITGIEITDLNSMKKSAAKFADLGISRTIITLGSQG-VFYAAGNRTAQLA 238
Query: 310 IIPAARVIDTTGAGDTFTASFAVGFV-EGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ +D T AGDTF +F ++ E + +A A++L VQ GA S+P
Sbjct: 239 AFK-VKTVDPTAAGDTFIGAFVAKLSPTMENFTEAINYAQKASALTVQHLGAQVSIP 294
>gi|149909308|ref|ZP_01897964.1| ribokinase [Moritella sp. PE36]
gi|149807625|gb|EDM67573.1| ribokinase [Moritella sp. PE36]
Length = 306
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 155/306 (50%), Gaps = 8/306 (2%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + + GGKGANQA A+L F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVASFPRPGETLLGHSYAVIPGGKGANQAVAAARLGADIAFIACVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + G+ + V +D PTG A++ + + G+NSI I N PE+
Sbjct: 64 DSFGASMITEFDLDGINTQAVMVEQD--TPTGIAMIQVAATGENSICISAEANACLTPER 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+++++A +L+Q E P + Q AK A AG V+ + P+ ELL +D
Sbjct: 122 LAPHS-KLIEQADTLLMQLETPITTITQAAKIANQAGTRVVLNPAPAQ-PLSDELLAVVD 179
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGE-KPIKQ 308
+++PNE+E LTG+ A H G+ +V++ LG++G + G K +K
Sbjct: 180 LITPNETEAELLTGIKVTDMASAQVAANALHAKGISEVMITLGSQGVWISQAGTGKQVKG 239
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRK 368
+ A +DTT AGDTF G G ++ +RFA AAA++ V GA S+P +
Sbjct: 240 FRVDA---VDTTAAGDTFNGGLLAGLQAGLVLDDAIRFAHAAAAISVTRVGAQTSIPTKA 296
Query: 369 SVLNLL 374
V L
Sbjct: 297 EVDEFL 302
>gi|417003517|ref|ZP_11942547.1| putative ribokinase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325478500|gb|EGC81613.1| putative ribokinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 297
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 163/310 (52%), Gaps = 24/310 (7%)
Query: 69 PLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVG 128
++ GS N DI+ ++ + + GET++A+ + AGGKG NQ+ AK S Y VG +G
Sbjct: 2 KIINFGSVNIDIFFAVEHIVRPGETISARDIERRAGGKGLNQSVALAKNSDEVYHVGNIG 61
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D G+ + D L G+ D++ + TG+A++ + G+N I++ G N +
Sbjct: 62 SD--GEFLADYLGSQGINTDFL---RKSDNLTGNALIQVDDAGENCIVLYKGANFDN-DK 115
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF- 247
F DE K I++LQ EI ++ + A G+ ++ + +PI +E+ F
Sbjct: 116 DFIDEVFSYFAKGDILVLQNEI--NMMDYIIDRAYEKGLKIVLNP----SPITEEVKKFD 169
Query: 248 ---IDILSPNESELGRLTGMPTDSYEQISEAVVKCH-KMGVQQVLVKLGAKGSALFVEGE 303
ID+L NE E ++G+ D E+ E K + K+ ++++ LG+KGS +++
Sbjct: 170 YEKIDLLLVNEHEAKAISGI--DDIEENIEYFRKTYPKL---KLIITLGSKGS-IYISEN 223
Query: 304 KPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
I+Q ID+TGAGDTFT F F +G ++CL A A++L V KGA S
Sbjct: 224 DLIRQDAYKV-EAIDSTGAGDTFTGYFVANFYKGVDVDKCLDLATKASALSVTKKGASGS 282
Query: 364 MPDRKSVLNL 373
+P+++ V+N
Sbjct: 283 IPNQEEVINF 292
>gi|114770329|ref|ZP_01447867.1| ribokinase [Rhodobacterales bacterium HTCC2255]
gi|114549166|gb|EAU52049.1| ribokinase [alpha proteobacterium HTCC2255]
Length = 291
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 34/308 (11%)
Query: 74 GSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANG 133
GS N D ++DR P GET+++K+ + GGKG NQ+ + VG +G+D
Sbjct: 6 GSINIDNVYQVDRFPLDGETISSKSYDKILGGKGINQSVAIHRAGGDVKHVGYIGDDT-- 63
Query: 134 KLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTN-----MSCWP- 187
I D + G++ D+++ PTGHA++ + + G+N I+I G N C+
Sbjct: 64 -WILDQILKIGIKTDFISKCYG---PTGHAIIFVDAAGENEIVIHAGANDQFSKSQCFKI 119
Query: 188 -EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLN 246
E FG +D VV LQ EI +++I++AK A+ G + + A DA +E+L
Sbjct: 120 LESFGSKDSWVV-------LQNEI--NLSIEIAKKAKELGFRICYSAAPFDASHAKEMLP 170
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
++D+L NE+EL L +S E+ + V +LV LG++G+ L ++
Sbjct: 171 YVDLLVMNETELKEL----QNSIEK------NVFDLDVDMILVTLGSRGAELHMKNNTYK 220
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+ S I A +DTTGAGDTF SF + G ++ L +AAA++S+ + GA ++P
Sbjct: 221 QSSFI--AEPVDTTGAGDTFLGSFMACYDNGYEIKKALEYAAASSSIQITRIGAAKAIPT 278
Query: 367 RKSVLNLL 374
V L
Sbjct: 279 FDEVEEFL 286
>gi|408532617|emb|CCK30791.1| Putative ribokinase [Streptomyces davawensis JCM 4913]
Length = 297
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 163/303 (53%), Gaps = 17/303 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ + + P+ GETV + +T+ GGKGANQA A+ +G VG
Sbjct: 4 IAVLGSTNMDLVAFVAKAPQRGETVTGREFRTIPGGKGANQAIAAARAGATVSMIGAVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + L GV D++ + P+G A +++ +G N+I+++ N +
Sbjct: 64 DSFGTRLRSTLEHSGVETDHLRTTEG---PSGTAHIVVDDEGGNAIVVIPAANGTVDHLA 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
GDE L + A +LLQ EIP + A+AAR+ GV + P+P ELLN D
Sbjct: 121 PGDEGL--IASADALLLQLEIPLDAVLAGAQAARAHGVRTVLTPAPAQ-PLPVELLNATD 177
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
+L PNE E+ LTG TD S A+ + V +V+V LG+ GS G PI
Sbjct: 178 LLLPNEHEVAALTGR-TDPR---SAALALLEE--VPEVVVTLGSAGSLYAARGTDPI--- 228
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
++PA +V +DTTGAGDTF + AV EG+ + L +AAAAA+L VQ GA SMP R
Sbjct: 229 VVPAPQVTAVDTTGAGDTFAGTLAVALAEGRPMPDALAWAAAAAALSVQRAGASESMPYR 288
Query: 368 KSV 370
+
Sbjct: 289 SEI 291
>gi|255035747|ref|YP_003086368.1| ribokinase [Dyadobacter fermentans DSM 18053]
gi|254948503|gb|ACT93203.1| ribokinase [Dyadobacter fermentans DSM 18053]
Length = 302
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 147/297 (49%), Gaps = 10/297 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS+N D+ V+ + PK GETV T GGKGANQA A+L FV + G
Sbjct: 5 VLVIGSSNTDMVVKTEHFPKPGETVLGGTFLMNPGGKGANQAVAAARLGADVRFVAKTGN 64
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D GK + G+ + +M + + +G A++ + + GQN I++ G NM P
Sbjct: 65 DIFGKQAREGFRKEGIDISFMTETAE--LASGIALITVNAQGQNEIVVASGANMDLHPAD 122
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ E AG+ LLQ EIP ++V + + A V+ A G AP+ L+ +
Sbjct: 123 IPELAFE---NAGLALLQLEIPRETVRWALQQCAGRNIRTVLNPAPG--APLGPGFLDGL 177
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
+++PNE+E +TG+ DS E + A GVQ V++ LG++G +++ E
Sbjct: 178 YLITPNETETELITGITVDSEEALERAAQHLLGSGVQNVIITLGSRG--IYLASEHFTGM 235
Query: 309 SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
P +DTT AGD F + + EE RFA AA++ V GA S P
Sbjct: 236 IAAPVVEAVDTTAAGDVFNGALLKALADEAPLEEACRFACTAAAISVTRMGAQSSAP 292
>gi|169825245|ref|YP_001692856.1| ribokinase [Finegoldia magna ATCC 29328]
gi|167832050|dbj|BAG08966.1| ribokinase [Finegoldia magna ATCC 29328]
Length = 292
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 155/301 (51%), Gaps = 22/301 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D ++ PK GET+++ + GGKGANQA KL F+ VG
Sbjct: 3 ILVIGSVNVDTTYNLENFPKPGETISSLSKSRSVGGKGANQAIACQKLGGDVKFLACVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + I + GV D N++K V TG A++ + GQN I++ G N + +
Sbjct: 63 DMDADFIFKNMREYGV--DTSNIIK-KYVDTGTALINVDKTGQNQIVLDHGANYAISIQD 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
D+++E++ + I++LQ EIP VN K A+ GV VI + P P E +
Sbjct: 120 I-DDNIELLDECDILILQMEIPQEVNEYAIKKAKEKGVFVILN------PAPSEFEVENI 172
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ +D+ PNE+E+ R + + + + EA + V V++ LG GS F + E
Sbjct: 173 LDKVDLFVPNENEILRYS-----TKKNMKEAADELLDKNVGSVIITLGENGSEYFSKTEH 227
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IKQ I A V DTT AGD++ + AV + KS +E + FA +S V KG+ S+
Sbjct: 228 -IKQEAIKADAV-DTTSAGDSYIGAMAVMLDQKKSIKEAMEFATKVSSKTVTRKGSGESI 285
Query: 365 P 365
P
Sbjct: 286 P 286
>gi|350547203|ref|ZP_08916535.1| ribokinase [Mycoplasma iowae 695]
gi|349503230|gb|EGZ30841.1| ribokinase [Mycoplasma iowae 695]
Length = 301
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 155/309 (50%), Gaps = 15/309 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N DI + +++LPK G+T+ GGKGANQA +K++ TY +G VG
Sbjct: 4 VLVIGSLNMDIVINVNKLPKEGQTIYGNNISYFCGGKGANQAVALSKMNLETYMMGCVGN 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D NG + ++L V +++K PTG A + + DG N+I+I+ G N + +
Sbjct: 64 DDNGDKLINSLKENNVN---TSMIKKCNNPTGLASIYVSEDGSNNIVIIKGANYNNTVDD 120
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPI---PQELLN 246
++ + +K ++ Q EIP V + K A+ + + API +E+LN
Sbjct: 121 II-KNKDFIKSFEAIVCQFEIPQDVILSAFKIAKELKIKTFLNP----APIIKYDEEILN 175
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+ D L PNE+E L + ++ISE + + ++V G+KG L+ + +
Sbjct: 176 YTDYLIPNETEFEELFKIKK-PIQKISENDLNLKNKNI-NLIVTYGSKGVYLWKNNKFNL 233
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+S IDTT AGD+F F + + +E + F AS+ V KGA S+P
Sbjct: 234 FES--RKVNAIDTTAAGDSFIGGFVSNILSSNNIDEAINFGIDVASIAVTRKGAQQSIPS 291
Query: 367 RKSVLNLLQ 375
+ VL+ +
Sbjct: 292 YQEVLDFYK 300
>gi|161524800|ref|YP_001579812.1| ribokinase [Burkholderia multivorans ATCC 17616]
gi|189350446|ref|YP_001946074.1| ribokinase [Burkholderia multivorans ATCC 17616]
gi|160342229|gb|ABX15315.1| ribokinase [Burkholderia multivorans ATCC 17616]
gi|189334468|dbj|BAG43538.1| ribokinase [Burkholderia multivorans ATCC 17616]
Length = 310
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 137/292 (46%), Gaps = 6/292 (2%)
Query: 75 SANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGK 134
S N D+ V RLP GET+A AGGKG NQA A+L +G VG DA+G
Sbjct: 17 SLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGADAHGA 76
Query: 135 LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDED 194
+ L G+ D + PTG A++++ QN+I+IV G N PE +
Sbjct: 77 ALRAGLEAEGI--DCAGLATSASAPTGVALIVVDDGSQNAIVIVAGGNGEVTPETVARHE 134
Query: 195 LEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSP 253
A +++ Q E PD+V +A A R G V+ + AP+P + L +D L P
Sbjct: 135 -ATFASADVLICQLETPPDTVRAALA-AGRRLGRTVVLNPAPAVAPLPADWLALVDYLIP 192
Query: 254 NESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPA 313
NE E LTG P A G + VL+ LG +G L + + + P
Sbjct: 193 NELEAAALTGRPVRDAADAEVAARALQARGARNVLITLGERG-VLALTADGIARHYPAPV 251
Query: 314 ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
R +DTT AGDTF FA G + +RFA AA+L V GA PS+P
Sbjct: 252 VRAVDTTAAGDTFIGGFAARLAAGAEVDAAIRFAQRAAALSVTRAGAQPSIP 303
>gi|389839011|ref|YP_006341095.1| ribokinase [Cronobacter sakazakii ES15]
gi|387849487|gb|AFJ97584.1| ribokinase [Cronobacter sakazakii ES15]
Length = 309
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 155/308 (50%), Gaps = 10/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D + ++ P GETV Q GGKGANQA + F+ VGE
Sbjct: 7 LVVLGSINADHILNLEAFPAPGETVTGSQYQVAFGGKGANQAVAAGRSGADIAFIACVGE 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I LS + D V G TG A++ + +G+N I I G N + PE+
Sbjct: 67 DDIGERIRQQLSRDNI--DVAPVRTVAGESTGVALIFVNGEGENVIGIHAGANAALTPER 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+E E + A +L+Q E P I A+ A VI + A + ELL +D
Sbjct: 125 V-NEQREKIANARALLMQLESPVESVIAAARIAHENQTTVILNPAPARA-LSDELLALVD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E +LTG+ E ++A H+ G++ V++ LG++G L V GE
Sbjct: 183 IITPNETEAEKLTGVKVSDDESAAQAAAVLHQKGIETVIITLGSRGVWLSVNGEG----Q 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+P RV +DT AGDTF + +EG E +RFA AAA++ V GA PS+P R
Sbjct: 239 RVPGFRVKAVDTIAAGDTFNGALMTALLEGTPMLEAIRFAHAAAAIAVTRPGAQPSVPWR 298
Query: 368 KSVLNLLQ 375
+ LQ
Sbjct: 299 DEIDAFLQ 306
>gi|421475184|ref|ZP_15923161.1| ribokinase [Burkholderia multivorans CF2]
gi|400230692|gb|EJO60447.1| ribokinase [Burkholderia multivorans CF2]
Length = 310
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 138/292 (47%), Gaps = 6/292 (2%)
Query: 75 SANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDANGK 134
S N D+ V RLP GET+A AGGKG NQA A+L +G VG DA+G
Sbjct: 17 SLNMDLVVRAPRLPLPGETLAGHAFAQAAGGKGGNQAVAAARLGAQVAMIGCVGADAHGA 76
Query: 135 LITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFGDED 194
+ L G+ D + PTG A++++ QN+I+IV G N PE +
Sbjct: 77 ALRAGLEAEGI--DCAGLATSASAPTGVALIVVDDGSQNAIVIVAGGNGEVTPETVARHE 134
Query: 195 LEVVKKAGIVLLQREI-PDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDILSP 253
+ A +++ Q E PD+V +A A R G V+ + AP+P + L +D L P
Sbjct: 135 -ATLACADVLICQLETPPDTVRAALA-AGRRLGRTVVLNPAPAVAPLPADWLALVDYLIP 192
Query: 254 NESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSIIPA 313
NE E LTG P A G + VLV LG +G L + + + P
Sbjct: 193 NELEAAALTGRPVRDAADAEVAARALQARGARNVLVTLGERG-VLALTADGIARHYPAPV 251
Query: 314 ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
R +DTT AGDTF FA G + +RFA AA+L V GA PS+P
Sbjct: 252 VRAVDTTAAGDTFIGGFAARLAAGAEVDAAIRFAQRAAALSVTRAGAQPSIP 303
>gi|418645562|ref|ZP_13207683.1| ribokinase [Staphylococcus aureus subsp. aureus IS-55]
gi|421149052|ref|ZP_15608711.1| ribokinase [Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|443639004|ref|ZP_21123028.1| ribokinase [Staphylococcus aureus subsp. aureus 21196]
gi|375022666|gb|EHS16137.1| ribokinase [Staphylococcus aureus subsp. aureus IS-55]
gi|394331154|gb|EJE57242.1| ribokinase [Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|443407959|gb|ELS66490.1| ribokinase [Staphylococcus aureus subsp. aureus 21196]
Length = 304
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A ++ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFIVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|197335519|ref|YP_002156263.1| ribokinase [Vibrio fischeri MJ11]
gi|197317009|gb|ACH66456.1| ribokinase [Vibrio fischeri MJ11]
Length = 305
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 160/308 (51%), Gaps = 12/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV+GS N D +++ P+ GET+ + + GGKGANQA A+L F+ VG+
Sbjct: 4 LVVLGSVNADHVLQVASFPRPGETLHGHSYSVIPGGKGANQAVAAARLGADIAFIASVGD 63
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+ G + +A G+ + + + ++ PTG A++ + + G+NSI I N ++
Sbjct: 64 DSFGHQMIEAFQFDGINTEAVMIEEN--TPTGIAMIQVAATGENSICISAEANARLTADR 121
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQ---ELLN 246
+++ A +L+Q E P + A+ A++AG V+ + AP Q +LL
Sbjct: 122 IAPHH-GLIEAADTLLMQLETPIETIEKAAQIAKAAGTKVVLNP----APAHQLSDDLLQ 176
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DI++PNE+E LTG+ +A H G++ V++ LG+KG +++ +
Sbjct: 177 LVDIITPNETEAELLTGIQVTDMASAQQAADALHAKGIETVMITLGSKG--VWISQDGSG 234
Query: 307 KQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPD 366
+Q + DTTGAGDTF +F G G+ ++ ++FA AAA++ V GA S+P
Sbjct: 235 RQVEGFKVQATDTTGAGDTFNGAFLTGLQSGRKLDDAIKFAHAAAAISVTRMGAQTSIPS 294
Query: 367 RKSVLNLL 374
V L
Sbjct: 295 ITEVERFL 302
>gi|257139218|ref|ZP_05587480.1| ribokinase [Burkholderia thailandensis E264]
Length = 324
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 151/300 (50%), Gaps = 12/300 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++VVGS N D+ V RLP+ GET+A ++ AGGKG NQA A+L +G+VG
Sbjct: 20 VMVVGSLNMDLVVRSPRLPQPGETLAGRSFAQAAGGKGGNQAVAAARLGAQVAMLGRVGS 79
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
DA+G + L G+ ++V TG A++++ QN+I+IV G+N PE
Sbjct: 80 DAHGAALRAGLVAEGIDCGALSVSTT--ATTGVALIVVDDASQNAIVIVAGSNGEVTPEA 137
Query: 190 FGDEDLEVVKKAGIVLLQREIP-DSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
E + A +++ Q E P D+V +A A R G V+ + P+P + L +
Sbjct: 138 I-AEHDAAIAAADVLICQLETPGDAVRAALA-AGRRLGKTVVLNPAPAVGPLPADWLPLV 195
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGS-ALFVEGEKPIK 307
D L PNE E LTG P A G + V+V LG +G+ AL +G
Sbjct: 196 DYLIPNEIEAAALTGSPVRDPASAEAAARALAAAGARNVIVTLGGQGAVALTADG----V 251
Query: 308 QSIIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
PA RV +DTT AGDTF FA G + + +RFA AA+L V GA PS+P
Sbjct: 252 ARHYPAPRVTPVDTTAAGDTFIGGFAARLAAGDTPHDAIRFAQRAAALSVTRAGAQPSIP 311
>gi|291294602|ref|YP_003506000.1| ribokinase [Meiothermus ruber DSM 1279]
gi|290469561|gb|ADD26980.1| ribokinase [Meiothermus ruber DSM 1279]
Length = 313
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 156/324 (48%), Gaps = 30/324 (9%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAK-LSHP-------- 120
+VVVGS N D+ V + R P GET+ +T GGKGANQA A+ L+ P
Sbjct: 3 IVVVGSINMDLVVRVKRHPVPGETLLGSDYETHHGGKGANQAVAAARMLARPMPTKSASP 62
Query: 121 -----TYFVGQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSI 175
+G+VG+D G+ + +AL G+ + + PTG A + + +GQN+I
Sbjct: 63 GPAPGVRMIGRVGQDEFGQQLRNALKREGINVSATLPI---AAPTGVAFIAIDEEGQNTI 119
Query: 176 IIVGGTNMSCWPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGG 235
I+ G N PE + E +A +V+LQ EIP + A+ R AG VI +A
Sbjct: 120 IVSPGANHRLRPEHLSPAEFE---EARVVVLQLEIPLETVRRAAELGRQAGAQVILNAAP 176
Query: 236 MDAPIPQELLNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKG 295
+P +LL+ IDIL NE E L+G+ DS E E V + V V++ LG +G
Sbjct: 177 AQK-LPDKLLHHIDILVVNEIEALGLSGVKPDSPEMALE-VAQLLAKKVPTVIITLGEQG 234
Query: 296 SALFV---EGEKPIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAAS 352
+ +G +P +P V+D TGAGD F + A EG+ + + A +
Sbjct: 235 AVWASPEGQGHQP-----VPEVEVVDATGAGDAFIGALAAALCEGRPLAQAVAHGCVAGA 289
Query: 353 LCVQVKGAIPSMPDRKSVLNLLQY 376
L GA S+P R+ V L+
Sbjct: 290 LATTKTGAQSSLPWREEVCARLEL 313
>gi|418320714|ref|ZP_12932068.1| ribokinase [Staphylococcus aureus subsp. aureus VCU006]
gi|365226504|gb|EHM67720.1| ribokinase [Staphylococcus aureus subsp. aureus VCU006]
Length = 304
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K V TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKSTEVKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ V + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHDVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|417925214|ref|ZP_12568641.1| ribokinase [Finegoldia magna SY403409CC001050417]
gi|341592511|gb|EGS35397.1| ribokinase [Finegoldia magna SY403409CC001050417]
Length = 292
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 154/301 (51%), Gaps = 22/301 (7%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
++V+GS N D + PK GET+++ + GGKGANQA KL F+ VG
Sbjct: 3 ILVIGSVNVDTTYNLKNFPKPGETISSLSKSRSVGGKGANQAIACQKLGGDVKFLACVGN 62
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D + I + GV D N++K V TG A++ + GQN I++ G N + +
Sbjct: 63 DMDADFIFKNMREYGV--DTSNIIK-KDVDTGTALINVDKTGQNQIVLDHGANYAISIQD 119
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQE-----L 244
D+++E++ + I++LQ EIP VN K A+ GV VI + P P E +
Sbjct: 120 I-DDNIELLDECDILILQMEIPQEVNEYAIKKAKEKGVFVILN------PAPSEFEVENI 172
Query: 245 LNFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEK 304
L+ +D+ PNE+E+ R + + + + EA + V V++ LG GS F + E
Sbjct: 173 LDKVDLFVPNENEILRYS-----TKKNMKEAADELLDKNVGSVIITLGENGSEYFSKTEH 227
Query: 305 PIKQSIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
IKQ I A V DTT AGD++ + AV + KS +E + FA +S V KG+ S+
Sbjct: 228 -IKQEAIKADAV-DTTSAGDSYIGAMAVMLDQKKSIKEAMEFATKVSSKTVTRKGSGESI 285
Query: 365 P 365
P
Sbjct: 286 P 286
>gi|238855929|ref|ZP_04646216.1| ribokinase [Lactobacillus jensenii 269-3]
gi|260664529|ref|ZP_05865381.1| ribokinase [Lactobacillus jensenii SJ-7A-US]
gi|313472024|ref|ZP_07812516.1| ribokinase [Lactobacillus jensenii 1153]
gi|238831446|gb|EEQ23796.1| ribokinase [Lactobacillus jensenii 269-3]
gi|239530047|gb|EEQ69048.1| ribokinase [Lactobacillus jensenii 1153]
gi|260561594|gb|EEX27566.1| ribokinase [Lactobacillus jensenii SJ-7A-US]
Length = 308
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 151/297 (50%), Gaps = 11/297 (3%)
Query: 72 VVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGEDA 131
V+GS N D + ++R+P GETV + GGKGANQA A+ +F+G +G+D
Sbjct: 7 VLGSINLDTTLHVERIPLPGETVPVSDKSSAPGGKGANQAVASARSGAKVHFIGAIGDDN 66
Query: 132 NGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEKFG 191
+G+ + +L + D N+ K TG A +ML +GQNSI++ G N +
Sbjct: 67 SGQTMLRSLKEDNI--DLTNITKSDKAGTGTATIMLDENGQNSILVYPGANKEINLTQIK 124
Query: 192 DEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFIDIL 251
+ + ++ ++ Q E P + A GV + + + IP ELL DI+
Sbjct: 125 NAE-SLIASMDFIVAQFETPIKETTLAFQIAHKHGVVTVLNPAPA-SHIPDELLGETDII 182
Query: 252 SPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSII 311
+PNE+E +TG+ DS ++++ GV+ L+ LG KG ++ +K K I+
Sbjct: 183 APNETESFAITGIKADSLSSMNKSANYFRDKGVKATLITLGDKG--VYYSYDKQAK--IV 238
Query: 312 PAARV--IDTTGAGDTFTASFAVGFVEGKSR-EECLRFAAAAASLCVQVKGAIPSMP 365
PA +V +DTT AGDTF + + + S E + + A+SL VQ GA PS+P
Sbjct: 239 PAYKVKAVDTTAAGDTFLGALSAVLKKDLSNLEVAIDYGEKASSLTVQRNGAQPSIP 295
>gi|424735649|ref|ZP_18164112.1| ribokinase [Lysinibacillus fusiformis ZB2]
gi|422950306|gb|EKU44675.1| ribokinase [Lysinibacillus fusiformis ZB2]
Length = 294
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 155/306 (50%), Gaps = 27/306 (8%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ V+GS N D+ V+++ PK GET+ + QT+ GGKGANQA A+L VG +G
Sbjct: 2 ITVIGSLNMDLVVQMNAFPKQGETILGNSFQTVPGGKGANQAVAAARLGSEVAMVGCLGN 61
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ + AL ++ + VK PTG A +++ + N I++V G N
Sbjct: 62 DHFGETLHAALQKEQIQTKAL--VKSTTAPTGIANILIY-NSDNRIVVVPGANYDLSISH 118
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD---AGGMDAPIPQELLN 246
+ E+++K+ +V++Q EIP + AGVP++ + A D + +
Sbjct: 119 L-EASKELIQKSHLVIIQLEIPKETTAHAIHLCKEAGVPILLNPAPAANFDV----QWME 173
Query: 247 FIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
I L+PNE+E + P EQ+ E +++V LG+ G+ F +G PI
Sbjct: 174 DITYLTPNETECAEIFNEPV---EQVLEKYPN-------KLIVTLGSDGARYF-DGSYPI 222
Query: 307 KQSIIPA--ARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+P V+DTTGAGDTF + A VEG+S +E + FA AASL V+ GA M
Sbjct: 223 H---VPGYMTTVVDTTGAGDTFNGALAYALVEGQSLDEAVYFANIAASLSVEKLGAQGGM 279
Query: 365 PDRKSV 370
P +V
Sbjct: 280 PALGAV 285
>gi|253315520|ref|ZP_04838733.1| ribokinase [Staphylococcus aureus subsp. aureus str. CF-Marseille]
Length = 304
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 156/302 (51%), Gaps = 16/302 (5%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQ-TLAGGKGANQAACGAKLSHPTYFVGQVG 128
+V++GS N D ++ ++R + GET+ + +Q GGKGANQA A++ T F+ ++G
Sbjct: 5 VVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQVDTTFITKIG 64
Query: 129 EDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPE 188
D I + + Y ++K TG A + + ++GQN+I + GG NM+ PE
Sbjct: 65 TDGVADFILEDFKAAHIDTSY--IIKTTEAKTGQAFITVNAEGQNTIYVYGGANMTMTPE 122
Query: 189 KFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFI 248
+ + + A V+ Q E+P I + A++ GV + + A +P ELL+ I
Sbjct: 123 DVINAK-DAIINADFVVAQLEVPIPAIISAFEIAKAHGVTTVLNPAPAKA-LPNELLSLI 180
Query: 249 DILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQ 308
DI+ PNE+E L+G+ + + + + +G++ VL+ LG +G+ + +
Sbjct: 181 DIIVPNETEAELLSGIKVTNEQSMKDNANYFLSLGIKTVLITLGKQGTYFATKNQS---- 236
Query: 309 SIIPAARV--IDTTGAGDTFTASFAVGFVEGKSRE---ECLRFAAAAASLCVQVKGAIPS 363
I A +V IDTT AGDTF +F KS++ + + F A+SL VQ GA S
Sbjct: 237 QHIEAYKVNAIDTTAAGDTFIGAFVSRL--NKSQDNLADAIDFGNKASSLTVQKHGAQAS 294
Query: 364 MP 365
+P
Sbjct: 295 IP 296
>gi|256272100|gb|EEU07103.1| Rbk1p [Saccharomyces cerevisiae JAY291]
Length = 333
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 163/341 (47%), Gaps = 54/341 (15%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPT-----YFV 124
+ V+GS N+D+ DRLP GET A +T AGGKG NQAA KL +P+ +
Sbjct: 3 ITVIGSLNYDLDTFTDRLPNAGETFRANHFETHAGGKGLNQAAAIGKLKNPSSRYSVRMI 62
Query: 125 GQVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSD--GQNSIIIVGGTN 182
G VG D GK + D LS CGV + ++ + G+ TG A ++++ GQN I+IV G N
Sbjct: 63 GNVGNDTFGKQLKDTLSDCGVDITHVGTYE--GINTGTATILIEEKAGGQNRILIVEGAN 120
Query: 183 MSC----------WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFD 232
+PE G E+ E V+ Q EIPD ++I A ++++
Sbjct: 121 SKTIYDSKQLCEIFPE--GKEEEEY------VVFQHEIPDPLSIIKWIHANRPNFQIVYN 172
Query: 233 AGGMDAPIPQELLNFIDILSPNESELGRLTGMPTDSY---------------------EQ 271
A +P++ +D+L NE E ++ D+ E
Sbjct: 173 PSPFKA-MPKKDWELVDLLVVNEIEGLQIVESVFDNELVEEIREKIKDDFLGEYRKICEL 231
Query: 272 ISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQSI--IPAARVIDTTGAGDTFTAS 329
+ E ++ K G+ V++ LG+KG LF E P Q + I V+DTTGAGDTF
Sbjct: 232 LYEKLMNRKKRGI--VVMTLGSKG-VLFCSHESPEVQFLPAIENVSVVDTTGAGDTFLGG 288
Query: 330 FAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDRKSV 370
+G++ ++F+ A+SL +Q KGA SMP K V
Sbjct: 289 LVTQLYQGETLSTAIKFSTLASSLTIQRKGAAESMPLYKDV 329
>gi|297531473|ref|YP_003672748.1| ribokinase [Geobacillus sp. C56-T3]
gi|297254725|gb|ADI28171.1| ribokinase [Geobacillus sp. C56-T3]
Length = 297
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 155/309 (50%), Gaps = 24/309 (7%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D+ R P GET+ + T GGKGANQA A+L +G V
Sbjct: 4 PTITVIGSINMDLVTVAARFPNQGETILGEQFLTTPGGKGANQAVAAARLGADVRMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G+DA G+ + +L GV +DY+ V TG A + + S N II+V G N + P
Sbjct: 64 GDDAFGQELIRSLQNEGVSVDYVKPVTHQH--TGIAAITI-SQQDNRIIVVPGANHALTP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
E D V+ ++ + LLQ EIP V + A GV VI + P+P +L
Sbjct: 121 EDL-DPYESVIAESDVCLLQLEIPLPVVERAVSIAHRHGVRVIVNPAPAQ-PLPLVVLEQ 178
Query: 248 IDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIK 307
L+PNE E L ++++ E +++V GAKG ++ +G+
Sbjct: 179 ASFLTPNEHERAIL-------FDKMDEEAF------ADKLIVTEGAKGVRIWQDGQ---- 221
Query: 308 QSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMP 365
+ +IP+ V+DTTGAGDTF + AV EGK +E RFA AAA+L V GA MP
Sbjct: 222 ERLIPSFHVPVVDTTGAGDTFNGALAVALAEGKPLDEACRFANAAAALSVTKLGAQAGMP 281
Query: 366 DRKSVLNLL 374
R+ V + L
Sbjct: 282 RRQEVESFL 290
>gi|212640490|ref|YP_002317010.1| ribokinase [Anoxybacillus flavithermus WK1]
gi|212561970|gb|ACJ35025.1| Ribokinase [Anoxybacillus flavithermus WK1]
Length = 294
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 157/310 (50%), Gaps = 26/310 (8%)
Query: 68 PPLVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQV 127
P + V+GS N D+ R+P GETV + + + GGKGANQA A+L + +G V
Sbjct: 4 PKITVIGSINMDLVTITKRMPVQGETVLGEAFRLIPGGKGANQAVAAARLGADVHMIGAV 63
Query: 128 GEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWP 187
G D G + L G+ +D + V D V TG A +++ S+G N II+V G N + P
Sbjct: 64 GADMFGTELLQHLQKEGIIVDGVKPVTD--VETGIATIVI-SEGDNRIIVVPGANHALCP 120
Query: 188 EKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNF 247
+ + E + + + LL EIP V Q A+ GV VI + P+P +LL+
Sbjct: 121 DDLERWE-EKIATSDVCLLPLEIPLPVVEQAVAIAKRHGVRVILNPAPAQ-PLPDQLLDQ 178
Query: 248 IDILSPNESELG-RLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPI 306
+DIL+PNE E L G P + + HK+ +V G +G + GE
Sbjct: 179 VDILTPNEHERDVVLAGRPMEKW---------AHKL-----IVTEGKRGVSFQRNGE--- 221
Query: 307 KQSIIPAAR--VIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
++IP+ V+DTTGAGDTF + AV +G EE R+A AAA+L V GA M
Sbjct: 222 -WTLIPSFHVPVVDTTGAGDTFNGALAVALSKGMVLEEACRYANAAAALSVTKLGAQTGM 280
Query: 365 PDRKSVLNLL 374
P K + + L
Sbjct: 281 PTEKELESFL 290
>gi|303253743|ref|ZP_07339879.1| ribokinase [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307248720|ref|ZP_07530733.1| Ribokinase [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302647399|gb|EFL77619.1| ribokinase [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306854647|gb|EFM86837.1| Ribokinase [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 303
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 14/308 (4%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTY----FVG 125
L V+GS N D + + PK GET+ GGKGANQA A++ + + F+
Sbjct: 4 LCVLGSVNADHVIRVPYFPKAGETLKGGHYHIAYGGKGANQAVAAARVRNTSLVEVDFIA 63
Query: 126 QVGEDANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSC 185
+G D G+ + A G+ +++ V D TG A++ + G+NSI+I G N +
Sbjct: 64 CIGADDIGRAMKQAFVQDGINPEHIVEVADQ--MTGIAMIQVADSGENSIVISAGANAN- 120
Query: 186 WPEKFGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELL 245
E + ++ A +L+Q E P + K A++ VI + P+ E+L
Sbjct: 121 LDESVVAQHQATIESADCLLVQLETPLQAVEKALKIAKAHHTQVILNPAPAQ-PLSDEIL 179
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+ ID+++PNE+E LTG+ + +A H+ G+Q VL+ LGAKG+ L G
Sbjct: 180 SNIDMITPNETETALLTGVQVVDEQTAQQAANVFHQKGIQTVLITLGAKGAFLSENGNGE 239
Query: 306 IKQ--SIIPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPS 363
I I P +DTT AGDTF + AV +EGKS + + FA A+S+ V GA S
Sbjct: 240 IIAGFKITP----VDTTAAGDTFNGALAVALLEGKSMRDAVMFAHKASSISVTRMGAQSS 295
Query: 364 MPDRKSVL 371
+P R ++
Sbjct: 296 IPTRAELV 303
>gi|377820706|ref|YP_004977077.1| ribokinase [Burkholderia sp. YI23]
gi|357935541|gb|AET89100.1| ribokinase [Burkholderia sp. YI23]
Length = 310
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 150/306 (49%), Gaps = 12/306 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
+ VVGS N D+ RLPK GET+A + GGKG NQA A+L +G VG
Sbjct: 10 VTVVGSLNMDLVARAPRLPKPGETLAGHAFAQVPGGKGGNQAVAAARLGAQVAMIGCVGN 69
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D+NG + +L G+ + D PTG A++++ QN+I+IV G+N S P +
Sbjct: 70 DSNGATLKGSLEAEGIDCSALATSPD--APTGVALIVVDDASQNAIVIVAGSNASVTPAR 127
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPV----IFDAGGMDAPIPQELL 245
+E ++ +A +++ Q E P ++ +AA +AG + I + +P +
Sbjct: 128 I-EEQQALLAQADVIVCQLETP----VETVRAALAAGRRLQRTTILNPAPAARKLPPDWF 182
Query: 246 NFIDILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKP 305
+D L PNE E L+G+ D+ + A G + V+V LGA+G ++G
Sbjct: 183 PLVDYLIPNEIEAATLSGVAIDTPDDARRAAQALKAKGARNVIVTLGAQGVLALLDGAGE 242
Query: 306 IKQSI-IPAARVIDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSM 364
+ P IDTT AGDTF FA G + + + F AA++ V +GA PS+
Sbjct: 243 DGVHVPSPPVDAIDTTAAGDTFIGGFAAELARGAAAMDAIAFGQRAAAVAVTREGAQPSI 302
Query: 365 PDRKSV 370
P R +
Sbjct: 303 PRRSEI 308
>gi|156936132|ref|YP_001440048.1| ribokinase [Cronobacter sakazakii ATCC BAA-894]
gi|156534386|gb|ABU79212.1| hypothetical protein ESA_04026 [Cronobacter sakazakii ATCC BAA-894]
Length = 309
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 154/308 (50%), Gaps = 10/308 (3%)
Query: 70 LVVVGSANFDIYVEIDRLPKVGETVAAKTSQTLAGGKGANQAACGAKLSHPTYFVGQVGE 129
LVV GS N D + ++ P GETV Q GGKGANQA + F+ VGE
Sbjct: 7 LVVFGSINADHILNLEAFPAPGETVTGSQYQVAFGGKGANQAVAAGRSGADIAFIACVGE 66
Query: 130 DANGKLITDALSGCGVRLDYMNVVKDGGVPTGHAVVMLQSDGQNSIIIVGGTNMSCWPEK 189
D G+ I LS + D V G TG A++ + +G+N I I G N + PE+
Sbjct: 67 DDIGERIRQQLSRDNI--DVAPVSAVAGESTGVALIFVNGEGENVIGIHAGANAALTPER 124
Query: 190 FGDEDLEVVKKAGIVLLQREIPDSVNIQVAKAARSAGVPVIFDAGGMDAPIPQELLNFID 249
+E E + A +L+Q E P I A+ A VI + A + ELL +D
Sbjct: 125 V-NEQREKIANARALLMQMESPVESVIAAARIAHENQTTVILNPAPARA-LSDELLALVD 182
Query: 250 ILSPNESELGRLTGMPTDSYEQISEAVVKCHKMGVQQVLVKLGAKGSALFVEGEKPIKQS 309
I++PNE+E +LTG+ E ++A H+ G++ V++ LG++G L V GE
Sbjct: 183 IITPNETEAEKLTGVKVSDDESAAQAAAVLHQKGIETVIITLGSRGVWLSVNGEG----Q 238
Query: 310 IIPAARV--IDTTGAGDTFTASFAVGFVEGKSREECLRFAAAAASLCVQVKGAIPSMPDR 367
+P RV +DT AGDTF + +EG E +RFA AAA++ V GA PS+P R
Sbjct: 239 RVPGFRVKAVDTIAAGDTFNGALMTALLEGTPMLEAIRFAHAAAAIAVTRPGAQPSVPWR 298
Query: 368 KSVLNLLQ 375
+ LQ
Sbjct: 299 DEIDAFLQ 306
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,892,101,999
Number of Sequences: 23463169
Number of extensions: 255367822
Number of successful extensions: 755704
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8144
Number of HSP's successfully gapped in prelim test: 11243
Number of HSP's that attempted gapping in prelim test: 722113
Number of HSP's gapped (non-prelim): 22011
length of query: 377
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 233
effective length of database: 8,980,499,031
effective search space: 2092456274223
effective search space used: 2092456274223
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)