Query 017102
Match_columns 377
No_of_seqs 149 out of 1400
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:58:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.1E-81 3.8E-86 604.1 24.7 370 5-377 3-422 (427)
2 3qb0_A Actin-related protein 4 100.0 2.3E-79 7.7E-84 592.9 28.4 366 3-377 19-498 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 3.2E-77 1.1E-81 568.8 32.8 374 4-377 2-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 1.9E-76 6.5E-81 566.2 15.8 372 3-374 2-388 (394)
5 4fo0_A Actin-related protein 8 100.0 5.1E-73 1.8E-77 571.2 23.9 370 7-377 15-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 5.5E-71 1.9E-75 533.6 29.3 370 5-376 3-412 (418)
7 4am6_A Actin-like protein ARP8 100.0 7.2E-60 2.5E-64 459.3 27.2 363 4-377 37-652 (655)
8 1jce_A ROD shape-determining p 100.0 2.9E-36 9.9E-41 283.6 19.0 307 8-355 4-330 (344)
9 2v7y_A Chaperone protein DNAK; 99.9 1.7E-26 5.7E-31 227.5 7.6 297 8-351 3-350 (509)
10 3h1q_A Ethanolamine utilizatio 99.9 5.9E-24 2E-28 193.0 16.1 244 7-349 28-272 (272)
11 1dkg_D Molecular chaperone DNA 99.9 9.4E-25 3.2E-29 208.0 10.8 304 8-351 3-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.9 5.8E-24 2E-28 203.3 12.9 301 7-351 18-392 (394)
13 3i33_A Heat shock-related 70 k 99.9 5.7E-23 2E-27 197.1 9.2 302 6-351 22-400 (404)
14 2kho_A Heat shock protein 70; 99.8 4E-21 1.4E-25 192.6 13.8 298 8-351 3-381 (605)
15 1yuw_A Heat shock cognate 71 k 99.8 9.9E-21 3.4E-25 187.9 14.5 213 103-350 140-378 (554)
16 3d2f_A Heat shock protein homo 99.8 1.2E-20 4.1E-25 190.7 11.8 213 103-351 139-382 (675)
17 4gni_A Putative heat shock pro 99.8 1.5E-20 5E-25 180.6 8.5 221 101-352 149-401 (409)
18 4b9q_A Chaperone protein DNAK; 99.8 3.8E-19 1.3E-23 178.3 9.0 304 8-351 3-381 (605)
19 2ych_A Competence protein PILM 99.7 2.3E-17 7.8E-22 156.6 14.2 173 117-320 152-331 (377)
20 2fsj_A Hypothetical protein TA 99.7 1.1E-17 3.6E-22 156.7 9.4 177 9-197 23-239 (346)
21 4a2a_A Cell division protein F 99.6 1.6E-15 5.3E-20 145.2 14.7 200 114-351 166-393 (419)
22 2zgy_A Plasmid segregation pro 99.5 2.3E-14 8E-19 132.7 9.8 179 126-350 135-320 (320)
23 4apw_A ALP12; actin-like prote 99.5 2.4E-14 8.3E-19 132.9 5.1 185 3-197 3-219 (329)
24 3js6_A Uncharacterized PARM pr 99.4 1.7E-13 5.8E-18 128.3 9.1 185 8-198 5-232 (355)
25 2d0o_A DIOL dehydratase-reacti 98.9 3.8E-09 1.3E-13 100.7 8.5 180 138-348 390-601 (610)
26 1nbw_A Glycerol dehydratase re 98.9 3.5E-09 1.2E-13 101.2 7.6 180 138-348 392-603 (607)
27 4ehu_A Activator of 2-hydroxyi 98.6 4.7E-08 1.6E-12 88.1 5.9 51 292-350 203-253 (276)
28 1hux_A Activator of (R)-2-hydr 97.6 0.00032 1.1E-08 62.7 10.3 48 296-351 209-256 (270)
29 1t6c_A Exopolyphosphatase; alp 96.7 0.0027 9.1E-08 57.9 7.0 73 116-191 97-177 (315)
30 2ews_A Pantothenate kinase; PA 96.5 0.022 7.6E-07 50.8 11.1 50 295-349 236-286 (287)
31 2gup_A ROK family protein; sug 96.3 0.017 5.8E-07 51.8 9.3 51 121-174 87-142 (292)
32 3cer_A Possible exopolyphospha 95.9 0.0035 1.2E-07 57.8 2.8 75 116-191 102-191 (343)
33 2i7n_A Pantothenate kinase 1; 95.7 0.033 1.1E-06 51.2 8.6 56 292-349 302-358 (360)
34 3vgl_A Glucokinase; ROK family 95.6 0.16 5.4E-06 46.1 12.7 46 127-174 94-146 (321)
35 4db3_A Glcnac kinase, N-acetyl 95.5 0.11 3.7E-06 47.4 11.2 52 298-349 272-324 (327)
36 1u6z_A Exopolyphosphatase; alp 95.4 0.044 1.5E-06 53.4 8.7 73 116-191 96-176 (513)
37 3hi0_A Putative exopolyphospha 95.3 0.053 1.8E-06 52.7 8.8 72 116-190 100-178 (508)
38 3r8e_A Hypothetical sugar kina 95.1 0.19 6.4E-06 45.6 11.5 46 127-174 115-168 (321)
39 4htl_A Beta-glucoside kinase; 95.1 1.1 3.7E-05 40.0 16.4 52 297-350 239-290 (297)
40 3vov_A Glucokinase, hexokinase 94.9 0.19 6.5E-06 45.2 10.9 47 127-175 96-149 (302)
41 2qm1_A Glucokinase; alpha-beta 94.5 0.12 4.2E-06 46.8 8.7 46 127-174 106-158 (326)
42 3cet_A Conserved archaeal prot 93.5 0.042 1.4E-06 49.7 3.2 25 150-174 127-151 (334)
43 3djc_A Type III pantothenate k 93.4 0.54 1.9E-05 41.3 10.3 19 9-27 4-22 (266)
44 2h3g_X Biosynthetic protein; p 91.6 0.87 3E-05 40.1 9.2 19 9-27 2-20 (268)
45 3mdq_A Exopolyphosphatase; str 90.9 0.27 9.4E-06 44.5 5.4 72 117-191 90-170 (315)
46 3bex_A Type III pantothenate k 90.4 1 3.5E-05 39.1 8.4 19 9-27 5-23 (249)
47 1zbs_A Hypothetical protein PG 86.6 4.2 0.00014 35.9 10.0 69 104-173 62-132 (291)
48 3zx3_A Ectonucleoside triphosp 86.3 2.5 8.7E-05 40.0 8.7 88 83-171 90-202 (452)
49 1zc6_A Probable N-acetylglucos 77.5 19 0.00066 31.7 10.9 89 81-173 53-145 (305)
50 2e2o_A Hexokinase; acetate and 75.5 16 0.00054 32.1 9.7 55 104-160 62-117 (299)
51 2aa4_A Mannac kinase, putative 70.6 14 0.00049 32.1 8.1 51 298-349 236-286 (289)
52 2yhw_A Bifunctional UDP-N-acet 70.5 4.9 0.00017 36.3 5.1 46 127-174 129-181 (343)
53 2ap1_A Putative regulator prot 67.5 11 0.00037 33.7 6.7 46 127-174 118-170 (327)
54 3aap_A Ectonucleoside triphosp 67.5 3.3 0.00011 37.9 3.2 35 150-184 140-176 (353)
55 2ch5_A NAGK protein; transfera 66.0 30 0.001 31.0 9.4 91 81-172 49-143 (347)
56 2f9w_A Pantothenate kinase; CO 65.2 17 0.00059 31.7 7.2 17 9-25 25-41 (271)
57 3mcp_A Glucokinase; structural 60.5 61 0.0021 29.5 10.4 133 1-176 3-173 (366)
58 1zxo_A Conserved hypothetical 59.1 7.1 0.00024 34.4 3.7 54 120-173 75-130 (291)
59 2aa4_A Mannac kinase, putative 53.8 5.9 0.0002 34.8 2.2 48 124-174 91-145 (289)
60 2hoe_A N-acetylglucosamine kin 46.2 51 0.0018 30.0 7.5 46 127-174 186-236 (380)
61 2hoe_A N-acetylglucosamine kin 43.0 13 0.00046 34.0 2.9 53 298-350 317-370 (380)
62 3epq_A Putative fructokinase; 41.2 19 0.00066 31.8 3.6 50 124-175 92-148 (302)
63 2yhx_A Hexokinase B; transfera 40.7 27 0.00093 33.0 4.7 51 298-351 386-442 (457)
64 3djc_A Type III pantothenate k 40.3 48 0.0016 28.7 5.9 49 152-200 4-53 (266)
65 3htv_A D-allose kinase, alloki 35.9 30 0.001 30.6 4.0 61 298-358 242-306 (310)
66 3eno_A Putative O-sialoglycopr 33.2 26 0.00089 31.5 3.1 27 296-322 250-276 (334)
67 2ivn_A O-sialoglycoprotein end 32.5 20 0.00067 32.3 2.1 35 296-335 245-279 (330)
68 1saz_A Probable butyrate kinas 31.0 34 0.0011 31.4 3.5 51 297-351 297-348 (381)
69 2itm_A Xylulose kinase, xylulo 30.2 29 0.001 32.9 3.1 48 296-351 387-434 (484)
70 2yrb_A Protein fantom; beta sa 29.9 21 0.00071 28.3 1.6 67 129-198 22-89 (156)
71 3cj1_A Ectonucleoside triphosp 29.6 38 0.0013 32.0 3.7 22 150-171 190-211 (456)
72 3qbx_A Anhydro-N-acetylmuramic 28.8 16 0.00056 33.4 0.9 23 297-319 285-307 (371)
73 1bdg_A Hexokinase; phosphotran 28.0 40 0.0014 31.7 3.5 50 299-351 396-446 (451)
74 3cqy_A Anhydro-N-acetylmuramic 27.0 18 0.00062 33.1 0.9 23 297-319 291-313 (370)
75 2ap1_A Putative regulator prot 25.3 17 0.00059 32.4 0.4 52 298-349 272-324 (327)
76 2zf5_O Glycerol kinase; hypert 25.3 61 0.0021 30.8 4.4 47 296-351 394-440 (497)
77 2e2o_A Hexokinase; acetate and 24.9 23 0.00079 31.0 1.2 46 297-350 241-286 (299)
78 1cza_N Hexokinase type I; stru 24.2 29 0.001 36.0 1.9 51 297-351 408-459 (917)
79 4g9i_A Hydrogenase maturation 24.1 25 0.00086 35.7 1.4 27 296-322 706-732 (772)
80 3vgl_A Glucokinase; ROK family 23.5 1.2E+02 0.0042 26.6 5.8 46 151-196 3-49 (321)
81 2h3g_X Biosynthetic protein; p 22.7 1.5E+02 0.0052 25.5 6.1 48 153-200 3-52 (268)
82 2dpn_A Glycerol kinase; thermu 22.5 48 0.0017 31.5 3.0 46 297-351 400-445 (495)
83 2e1z_A Propionate kinase; TDCD 22.1 43 0.0015 31.1 2.4 27 1-27 12-38 (415)
84 2ch5_A NAGK protein; transfera 21.0 49 0.0017 29.5 2.6 50 298-350 268-323 (347)
85 2w40_A Glycerol kinase, putati 20.8 85 0.0029 29.8 4.4 46 297-351 409-454 (503)
86 2q2r_A Glucokinase 1, putative 20.4 23 0.00079 32.3 0.2 46 128-174 126-205 (373)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-81 Score=604.08 Aligned_cols=370 Identities=37% Similarity=0.676 Sum_probs=322.2
Q ss_pred CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCC----------------------CccccCCCccceeccchhc
Q 017102 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT----------------------GVMVGMGQKDAYVGDEAQS 62 (377)
Q Consensus 5 ~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~----------------------~~~~~~~~~~~~vg~~~~~ 62 (377)
.+.++||||+||+++|+||||++.|+++|||+++++++. ..+.+..+.+.+||+++..
T Consensus 3 ~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~ 82 (427)
T 3dwl_A 3 SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALK 82 (427)
T ss_dssp CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHH
T ss_pred CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhh
Confidence 367899999999999999999999999999999998753 1112345568899999988
Q ss_pred ccC-cceeeccccCCccCCHHHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhh
Q 017102 63 KRG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 141 (377)
Q Consensus 63 ~~~-~~~~~~p~~~g~i~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~ 141 (377)
... ...+++|+++|.|.|||.++.+|+|+|.+.|++++.++|+++++|+++++..|+++++++||.|++|+++++++++
T Consensus 83 ~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~v 162 (427)
T 3dwl_A 83 KASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAV 162 (427)
T ss_dssp THHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHH
T ss_pred CcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHH
Confidence 765 6789999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcC--------CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHH
Q 017102 142 LSLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRD 213 (377)
Q Consensus 142 ~a~~~~g--------~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ 213 (377)
+|+|++| .++|+|||+|++.|+|+||++|+++.++.+++++||++++++|.++|.++++. ..+.+.+++
T Consensus 163 la~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~ 239 (427)
T 3dwl_A 163 LALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAER 239 (427)
T ss_dssp HHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHH
T ss_pred HHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHH
Confidence 9999998 68999999999999999999999999999999999999999999999877765 345688999
Q ss_pred HhHhcceeecCHHHHHHHhccCCCccceEEc--CCCc--eEeeCCccccccccCCCCCCCCCC-CCChhHHHHHHHhcCC
Q 017102 214 MKEKLAYIALDYEQELETAKTSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCD 288 (377)
Q Consensus 214 ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--pd~~--~i~i~~~~~~~~e~lf~p~~~~~~-~~~l~~~I~~~i~~~~ 288 (377)
+|+++|||+.|++++++.........+.|.+ |||. .+.++.+||+++|+||+|++++.+ ..+|+++|.++|.+||
T Consensus 240 IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~ 319 (427)
T 3dwl_A 240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSP 319 (427)
T ss_dssp HHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSC
T ss_pred HHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCC
Confidence 9999999999998888765443333556777 8887 788999999999999999999988 4899999999999999
Q ss_pred HHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhC--------------CCCceEEEECCCCCccccchhhHHhhccccc
Q 017102 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTF 354 (377)
Q Consensus 289 ~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~--------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~ 354 (377)
+|+|+.|++|||||||+|++|||.+||++||+.+. |...+++|..+++|.+++|+||||+|++++|
T Consensus 320 ~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f 399 (427)
T 3dwl_A 320 IDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEF 399 (427)
T ss_dssp HHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTH
T ss_pred HHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccch
Confidence 99999999999999999999999999999999886 4556799999999999999999999999999
Q ss_pred ccccccHHHHhhcCCcccccccC
Q 017102 355 QQMWIAKSEYDESGPSIVHRKCF 377 (377)
Q Consensus 355 ~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
+++||||+||+|+|++|++||++
T Consensus 400 ~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 400 GSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHHSEEHHHHHHSCGGGGSCCCC
T ss_pred hheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999974
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-79 Score=592.92 Aligned_cols=366 Identities=31% Similarity=0.568 Sum_probs=330.8
Q ss_pred CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccc-hhcccCcceeeccccCCccCCH
Q 017102 3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE-AQSKRGILTLKYPIEHGIVSNW 81 (377)
Q Consensus 3 ~~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~~~~~~~~p~~~g~i~~~ 81 (377)
..++..+||||+||.+||+||+|++.|++++||+++++++.. +++.+||++ +...++...+++|+++|.|.||
T Consensus 19 ggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw 92 (498)
T 3qb0_A 19 GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW 92 (498)
T ss_dssp CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred CCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence 457889999999999999999999999999999999987542 456789997 5555677889999999999999
Q ss_pred HHHHHHHHHhcccccccCCCCC-cEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCC
Q 017102 82 DDMEKIWHHTFYNELRVAPEEH-PILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160 (377)
Q Consensus 82 ~~~~~~~~~~~~~~L~~~~~~~-~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~ 160 (377)
|.++.+|+|+|.+.|++.+.++ ||+|++|++++...|+++++++||.|++++++++++++||+|++|.++|+|||+|++
T Consensus 93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g 172 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD 172 (498)
T ss_dssp HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence 9999999999988899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhc------------------CCCccCh------h-HHHHHHHHh
Q 017102 161 VSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER------------------GYSFTTT------A-EREIVRDMK 215 (377)
Q Consensus 161 ~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~ik 215 (377)
.|+|+||++|+++.+++.++++||++++++|.++|.++ ++.+... . +.++++++|
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999864 2333221 1 345899999
Q ss_pred HhcceeecC--HHHHHHHhccCCCccceEEcCCCceEeeCCc-cccccccCCCCCCCCC---------------------
Q 017102 216 EKLAYIALD--YEQELETAKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGM--------------------- 271 (377)
Q Consensus 216 ~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~-~~~~~e~lf~p~~~~~--------------------- 271 (377)
+++|||+.+ ++++... ..+...+.|++|||+.|.++.+ ||++||.||+|++++.
T Consensus 253 E~~c~Va~~~~~~~~~~~--~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~ 330 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKTE--LSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP 330 (498)
T ss_dssp HHTCCCCSSCHHHHHHHH--HHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred HhhEEecCCccHhHHhhh--ccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence 999999987 4443322 1234578899999999999999 9999999999987643
Q ss_pred -----------------------------------------------------------CCCChhHHHHHHHhcCCHHHH
Q 017102 272 -----------------------------------------------------------ESAGIHETTYNSIMKCDVDIR 292 (377)
Q Consensus 272 -----------------------------------------------------------~~~~l~~~I~~~i~~~~~~~r 292 (377)
+..||+++|.++|.+||.|+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r 410 (498)
T 3qb0_A 331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR 410 (498)
T ss_dssp CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence 567999999999999999999
Q ss_pred HhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC---CCCccccchhhHHhhcccccccccccHHHHhhcCC
Q 017102 293 KDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369 (377)
Q Consensus 293 ~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~ 369 (377)
+.|++||||+||+|++|||.+||++||+.+.| ..+++|..+ ++|.+++|+||||+|++.+|+++||||+||+|+|+
T Consensus 411 ~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~ 489 (498)
T 3qb0_A 411 ATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGV 489 (498)
T ss_dssp HHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred HHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCc
Confidence 99999999999999999999999999999999 789999987 78999999999999999999999999999999999
Q ss_pred -cccccccC
Q 017102 370 -SIVHRKCF 377 (377)
Q Consensus 370 -~~~~~k~~ 377 (377)
.||+|||.
T Consensus 490 ~~iv~~kc~ 498 (498)
T 3qb0_A 490 ERLLNDRFR 498 (498)
T ss_dssp HHHHHHTTC
T ss_pred HhhccccCc
Confidence 99999994
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=3.2e-77 Score=568.75 Aligned_cols=374 Identities=87% Similarity=1.392 Sum_probs=342.5
Q ss_pred CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHH
Q 017102 4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~ 83 (377)
+++.++||||+||+++|+||++++.|++++||+++++++.....+...++.++|+++...++...+++|+++|.+.||+.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence 46789999999999999999999999999999999988766555555678899999998888889999999999999999
Q ss_pred HHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceE
Q 017102 84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 163 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~ 163 (377)
++.+|+|+|.+.|++++.++++++++|++++..+|+++++++||.+++++++++++|+||+|++|..+++|||+|+++|+
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEE
Q 017102 164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE 243 (377)
Q Consensus 164 v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (377)
|+||++|+++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++.++++.....+.....|.
T Consensus 162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 241 (375)
T 2fxu_A 162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 241 (375)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence 99999999998888999999999999999999988888876667889999999999999998887766555455678899
Q ss_pred cCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhC
Q 017102 244 LPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA 323 (377)
Q Consensus 244 ~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~ 323 (377)
+|||+.+.++.+||.++|.||+|++++.+..+|.++|.++|.+||.++|+.+++||+||||+|++|||.+||++||..+.
T Consensus 242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~ 321 (375)
T 2fxu_A 242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA 321 (375)
T ss_dssp CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377 (377)
Q Consensus 324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
|...++++..+++|.+++|+||+++|++++|+++||||+||+|+|+++++||||
T Consensus 322 p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp CTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 988889999999999999999999999999999999999999999999999997
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=1.9e-76 Score=566.23 Aligned_cols=372 Identities=47% Similarity=0.888 Sum_probs=164.8
Q ss_pred CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCcc-c-cCCCccceeccchhcccCcceeeccccCCccCC
Q 017102 3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM-V-GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (377)
Q Consensus 3 ~~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~-~-~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~ 80 (377)
.+.+.++||||+||+++|+||++++.|++++||+++++++.... . +...++.++|+++...++...+++|+++|.+.|
T Consensus 2 ~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~d 81 (394)
T 1k8k_B 2 DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRN 81 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEec
Confidence 35577899999999999999999999999999999988765322 1 223467899999988877788999999999999
Q ss_pred HHHHHHHHHHhc-ccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCC
Q 017102 81 WDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD 159 (377)
Q Consensus 81 ~~~~~~~~~~~~-~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~ 159 (377)
|+.++.+|+|+| .+.|++++.++++++++|++++...|+++++++||.+++++++++++|+||+|++|.++++|||+|+
T Consensus 82 wd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~ 161 (394)
T 1k8k_B 82 WDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD 161 (394)
T ss_dssp ------------------------------------------------------------------------CCEEEECS
T ss_pred HHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence 999999999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCcc
Q 017102 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239 (377)
Q Consensus 160 ~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 239 (377)
++|+|+||++|+++.++..++++||++++++|.++|.++++++....+.+.++++|+++|+++.++..+++.....+...
T Consensus 162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 99999999999999998999999999999999999999888887666788999999999999999877776554444556
Q ss_pred ceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHH
Q 017102 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 240 ~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el 319 (377)
..|.+|||+.+.++.+||+++|+||+|++++.+..+|+++|.++|.+||.++|+.+++||+||||+|++|||.+||++||
T Consensus 242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el 321 (394)
T 1k8k_B 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321 (394)
T ss_dssp EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhC-----------CCCceEEEECCCCCccccchhhHHhhcccccc-cccccHHHHhhcCCccccc
Q 017102 320 SALA-----------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWIAKSEYDESGPSIVHR 374 (377)
Q Consensus 320 ~~~~-----------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itr~~y~e~G~~~~~~ 374 (377)
..+. |...++++..+++|.+++|+||+++|++++|+ ++||||+||+|+|+++++|
T Consensus 322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 9887 77778899889999999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-73 Score=571.17 Aligned_cols=370 Identities=21% Similarity=0.389 Sum_probs=293.7
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCcc----------------------------------------
Q 017102 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM---------------------------------------- 46 (377)
Q Consensus 7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~---------------------------------------- 46 (377)
+++||||+||.++|+|||||+.|+ .+|++++++......
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~-~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPA-SIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCE-EEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCC-eeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 558999999999999999999997 569999987532110
Q ss_pred ---------------------------------ccCCCccceeccchhcc--cCcceeeccccCC-----------ccCC
Q 017102 47 ---------------------------------VGMGQKDAYVGDEAQSK--RGILTLKYPIEHG-----------IVSN 80 (377)
Q Consensus 47 ---------------------------------~~~~~~~~~vg~~~~~~--~~~~~~~~p~~~g-----------~i~~ 80 (377)
......+++||++|+.. .+.+.++|||++| .+.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 01123567999999753 5678999999999 4678
Q ss_pred HHHHHHHHHHhcccccccCCCC---CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeC
Q 017102 81 WDDMEKIWHHTFYNELRVAPEE---HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDS 157 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDi 157 (377)
|++++.+|+|+|.+.|++.+++ |+|||++|+++++..|+.+++++||.|+||++++.++++||+|++|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999998999998765 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCcc-----ChhHHHHHHHHhHhcceeecCHHHH----
Q 017102 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT-----TTAEREIVRDMKEKLAYIALDYEQE---- 228 (377)
Q Consensus 158 G~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~-----~~~~~~~~~~ik~~~~~v~~~~~~~---- 228 (377)
|++.|+|+||+||+++.++..++++||++++++|.++|.++++.+. ...++++++++|+++||++.++..+
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 9999999999999999999999999999999999999999887654 3457889999999999998764211
Q ss_pred ---------------------HHH----------------------------------------------hccCCCccce
Q 017102 229 ---------------------LET----------------------------------------------AKTSSAVEKS 241 (377)
Q Consensus 229 ---------------------~~~----------------------------------------------~~~~~~~~~~ 241 (377)
+.. ..........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 000 0000112345
Q ss_pred EEcCCCceEeeCCccccccccCCCCCCC--------------------------------CCCCCChhHHHHHHHhcCC-
Q 017102 242 YELPDGQVITIGAERFRCPEVLFQPSMI--------------------------------GMESAGIHETTYNSIMKCD- 288 (377)
Q Consensus 242 ~~~pd~~~i~i~~~~~~~~e~lf~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~- 288 (377)
+..|++..+.++.+|+.++|.||.|+.. +.+..||+++|.++|.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 7788999999999999999999998542 1235689999999999997
Q ss_pred HHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCc-----eEEEECCC---CCccccchhhHHhhccccccccccc
Q 017102 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSM-----KIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIA 360 (377)
Q Consensus 289 ~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~-----~v~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~it 360 (377)
.|.|+.|++|||||||+|++|||.+||++||+.++|... +++|+.++ ||.+++|+||||+|+|++|+++|||
T Consensus 494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wIt 573 (593)
T 4fo0_A 494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIY 573 (593)
T ss_dssp HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEE
T ss_pred HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeEC
Confidence 699999999999999999999999999999999998643 58999886 8999999999999999999999999
Q ss_pred HHHHhhcCCcccccccC
Q 017102 361 KSEYDESGPSIVHRKCF 377 (377)
Q Consensus 361 r~~y~e~G~~~~~~k~~ 377 (377)
|+||+|+|++||++||+
T Consensus 574 k~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 574 QREWQRFGVRMLRERAA 590 (593)
T ss_dssp HHHHHHHTTHHHHHHCS
T ss_pred HHHHHhhCcHHHhhcCC
Confidence 99999999999999995
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=5.5e-71 Score=533.61 Aligned_cols=370 Identities=39% Similarity=0.687 Sum_probs=331.9
Q ss_pred CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc--------cccCCCccceeccchhcccCcceeeccccCC
Q 017102 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76 (377)
Q Consensus 5 ~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g 76 (377)
.+.++||||+||+++|+||++++.|++++||+++++++... ..+....+.+||+++...++ ..+++|+++|
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~-~~~~~pi~~G 81 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT-YATKWPIRHG 81 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTT-SEEECCEETT
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCC-CEEeccccCC
Confidence 46689999999999999999999999999999998876421 12223346899999988764 7899999999
Q ss_pred ccCCHHHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhh---------c
Q 017102 77 IVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA---------S 147 (377)
Q Consensus 77 ~i~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~---------~ 147 (377)
.+.||+.++.+|+++|.+.|+++++++++++++|++++...|+.+.+++||.+++++++++++|+||+|+ .
T Consensus 82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 9999999999999999788999888999999999999999999999999999999999999999999998 5
Q ss_pred CCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHH
Q 017102 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQ 227 (377)
Q Consensus 148 g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~ 227 (377)
+. +|+|||+|+++|+|+||++|+++.++...+++||++++++|.++|.+++..+....+.+.++++|+++|+++.++.+
T Consensus 162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~ 240 (418)
T 1k8k_A 162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240 (418)
T ss_dssp CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence 66 89999999999999999999999988899999999999999999998888776666788999999999999998877
Q ss_pred HHHHhccC-CCccceEEcCCCc-----eEeeCCccccccccCCCCCCCCCCC-CChhHHHHHHHhcCCHHHHHhhhcCeE
Q 017102 228 ELETAKTS-SAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGMES-AGIHETTYNSIMKCDVDIRKDLYGNIV 300 (377)
Q Consensus 228 ~~~~~~~~-~~~~~~~~~pd~~-----~i~i~~~~~~~~e~lf~p~~~~~~~-~~l~~~I~~~i~~~~~~~r~~l~~nIv 300 (377)
++++.... ......|.+||+. .+.++.+||.++|+||+|++.+.+. .+|.++|.++|.+||.++|+.+++||+
T Consensus 241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv 320 (418)
T 1k8k_A 241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV 320 (418)
T ss_dssp HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence 76544322 2234689999988 8999999999999999999887764 799999999999999999999999999
Q ss_pred EecCCCCCCChHHHHHHHHhhhC----------------CCCceEEEECCCCCccccchhhHHhhcccccccccccHHHH
Q 017102 301 LSGGSTMFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364 (377)
Q Consensus 301 l~GG~s~i~g~~~rl~~el~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y 364 (377)
||||+|++|||.+||++||..++ |...++++..+++|.+++|+|||++|++++|+++||||+||
T Consensus 321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey 400 (418)
T 1k8k_A 321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDY 400 (418)
T ss_dssp EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHH
T ss_pred EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHH
Confidence 99999999999999999999875 56667899999999999999999999999999999999999
Q ss_pred hhcCCccccccc
Q 017102 365 DESGPSIVHRKC 376 (377)
Q Consensus 365 ~e~G~~~~~~k~ 376 (377)
+|+|+++++|||
T Consensus 401 ~e~G~~~~~~~~ 412 (418)
T 1k8k_A 401 EEIGPSICRHNP 412 (418)
T ss_dssp HHHCGGGGGCCC
T ss_pred hhhCHHHHhhhc
Confidence 999999999976
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=7.2e-60 Score=459.25 Aligned_cols=363 Identities=21% Similarity=0.418 Sum_probs=302.7
Q ss_pred CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc---------c----------------------------
Q 017102 4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------M---------------------------- 46 (377)
Q Consensus 4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~---------~---------------------------- 46 (377)
.+..++|||++||.++|+|+|.|..|. .+|++++++..... .
T Consensus 37 ~~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~ 115 (655)
T 4am6_A 37 NDPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYY 115 (655)
T ss_dssp CCGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 355789999999999999999999998 77999986532100 0
Q ss_pred -----------------------cc---------C--CCccceeccchhcc-cCcceeeccccCCccC----C-------
Q 017102 47 -----------------------VG---------M--GQKDAYVGDEAQSK-RGILTLKYPIEHGIVS----N------- 80 (377)
Q Consensus 47 -----------------------~~---------~--~~~~~~vg~~~~~~-~~~~~~~~p~~~g~i~----~------- 80 (377)
+. + ...+.+||++|..+ ++.+.+++|+++|.+. |
T Consensus 116 k~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~ 195 (655)
T 4am6_A 116 KRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAEL 195 (655)
T ss_dssp SCCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHH
T ss_pred CCCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCcccccccc
Confidence 00 0 12477899999884 6778999999999998 8
Q ss_pred HHHHHHHHHHhccc-ccccCCC---CCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcC-CceEEEE
Q 017102 81 WDDMEKIWHHTFYN-ELRVAPE---EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG-RTTGIVL 155 (377)
Q Consensus 81 ~~~~~~~~~~~~~~-~L~~~~~---~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVV 155 (377)
|+.++.+|+|+|.+ .|+++++ ++||+|++|+++++..|+.+++++||.|++++++++.++++|+|++| .++||||
T Consensus 196 WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVV 275 (655)
T 4am6_A 196 ISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVV 275 (655)
T ss_dssp HHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEE
Confidence 99999999999973 8999886 79999999999999999999999999999999999999999999999 6999999
Q ss_pred eCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCC-----CccChhHHHHHHHHhHhcceee-cCHHHHH
Q 017102 156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY-----SFTTTAEREIVRDMKEKLAYIA-LDYEQEL 229 (377)
Q Consensus 156 DiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v~-~~~~~~~ 229 (377)
|+|++.|+|+||++|+++.+++.++++||++++++|.++|.++++ ++....+.+++++||+++|||+ .|..
T Consensus 276 DiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~--- 352 (655)
T 4am6_A 276 NIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA--- 352 (655)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC---
T ss_pred cCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh---
Confidence 999999999999999999999999999999999999999999987 4577788999999999999994 4431
Q ss_pred HHhccCCCccceE--EcCCC----ceEeeCCccccccccCCCCCCCC---------------------------------
Q 017102 230 ETAKTSSAVEKSY--ELPDG----QVITIGAERFRCPEVLFQPSMIG--------------------------------- 270 (377)
Q Consensus 230 ~~~~~~~~~~~~~--~~pd~----~~i~i~~~~~~~~e~lf~p~~~~--------------------------------- 270 (377)
.....| ..|++ ..+.++.|||++||+||.|++++
T Consensus 353 -------~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~ 425 (655)
T 4am6_A 353 -------VQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSL 425 (655)
T ss_dssp -------SEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCH
T ss_pred -------hhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccch
Confidence 112222 33554 36889999999999999986430
Q ss_pred ----------------------------------------------CCCCChhHHHHHHHhc-C---CHHHHHhhhcCeE
Q 017102 271 ----------------------------------------------MESAGIHETTYNSIMK-C---DVDIRKDLYGNIV 300 (377)
Q Consensus 271 ----------------------------------------------~~~~~l~~~I~~~i~~-~---~~~~r~~l~~nIv 300 (377)
....+|..+|.++|.. | +....+++++||+
T Consensus 426 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nil 505 (655)
T 4am6_A 426 SQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNIL 505 (655)
T ss_dssp HHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEE
T ss_pred hHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEE
Confidence 0024889999999974 2 3333459999999
Q ss_pred EecCCCCCCChHHHHHHHHhhhCC--------------------------------------------------------
Q 017102 301 LSGGSTMFPGIADRMSKEISALAP-------------------------------------------------------- 324 (377)
Q Consensus 301 l~GG~s~i~g~~~rl~~el~~~~~-------------------------------------------------------- 324 (377)
+|||+|+||||...|...+...-|
T Consensus 506 ivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 585 (655)
T 4am6_A 506 IVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQ 585 (655)
T ss_dssp EESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHH
T ss_pred EEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhh
Confidence 999999999998766555543111
Q ss_pred -----------CCceEEEECCCCC---ccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102 325 -----------SSMKIKVVAPPER---KYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377 (377)
Q Consensus 325 -----------~~~~v~v~~~~~~---~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
...+|+|..+|++ .+++|+|||++|++++|.++||||+||+|.|++||++||+
T Consensus 586 ~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 586 HQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred hhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence 0134788888854 8999999999999999999999999999999999999985
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=2.9e-36 Score=283.59 Aligned_cols=307 Identities=15% Similarity=0.215 Sum_probs=237.7
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhccc----CcceeeccccCCccCCHHH
Q 017102 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~ 83 (377)
.+|+||+||+++++|+.++. |...+||+++...+. ....++|++|.... ....+.+|+++|.+.+|+.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~ 75 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV 75 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence 68999999999999998765 666789999876531 23457999987653 2345678999999999999
Q ss_pred HHHHHHHhcccccccC-CCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeC
Q 017102 84 MEKIWHHTFYNELRVA-PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDS 157 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~-~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi 157 (377)
.+++|.+++.+..... ....++++++|..++..+|+.+.++ ++.+|++.+.++++|+||+++++. .+.+|||+
T Consensus 76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDi 154 (344)
T 1jce_A 76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDI 154 (344)
T ss_dssp HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEe
Confidence 9999999984322222 3468899999999999999998885 599999999999999999999986 68999999
Q ss_pred CCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhc-CCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCC
Q 017102 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER-GYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS 236 (377)
Q Consensus 158 G~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~ 236 (377)
|+++|+++++..|.++ .....++||+++++.+.+++.++ +..+ ..+.++++|+++++...+...+
T Consensus 155 Gggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~~~~~~----~~~~ae~~K~~l~~~~~~~~~~-------- 220 (344)
T 1jce_A 155 GGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAI----GERTAERVKIEIGNVFPSKEND-------- 220 (344)
T ss_dssp CSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEEC----CHHHHHHHHHHHCBCSCCHHHH--------
T ss_pred CCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHHhCccc----CHHHHHHHHHHHhccCccccCC--------
Confidence 9999999999999887 45688999999999999998754 2222 2467999999999875443211
Q ss_pred CccceEEc-----CCCc--eEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhh-cCeEEecCCCCC
Q 017102 237 AVEKSYEL-----PDGQ--VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLY-GNIVLSGGSTMF 308 (377)
Q Consensus 237 ~~~~~~~~-----pd~~--~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~-~nIvl~GG~s~i 308 (377)
...+.+ .+|. .+.++.+++. .+|+|.. ..+.+.|.++|.+++.+.+..++ ++|+||||+|++
T Consensus 221 --~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~ 290 (344)
T 1jce_A 221 --ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLL 290 (344)
T ss_dssp --HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCS
T ss_pred --cceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccc
Confidence 112222 3554 3444444443 2333311 23788888999999988888888 799999999999
Q ss_pred CChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc-ccccc
Q 017102 309 PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQ 355 (377)
Q Consensus 309 ~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~-l~~~~ 355 (377)
|||.++|++++.. + +..+++|.+++|.||++++. ++.|+
T Consensus 291 p~l~~~l~~~~~~------~--v~~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 291 RGLDTLLQKETGI------S--VIRSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp BTHHHHHHHHHSS------C--EEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred hHHHHHHHHHHCC------C--ccccCChHHHHHHHHHHHHhChHHHH
Confidence 9999999999942 2 33466889999999999998 45553
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.93 E-value=1.7e-26 Score=227.55 Aligned_cols=297 Identities=16% Similarity=0.212 Sum_probs=200.3
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCC--------CCceEEeeCCCCccccCCCccceeccchhccc-----Ccceeec---
Q 017102 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR-----GILTLKY--- 71 (377)
Q Consensus 8 ~~vvID~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~-----~~~~~~~--- 71 (377)
.+|+||+||++++++++.+..|..+ +||+++.. +...++|++|.... ....+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 5899999999999999987777655 77777762 23467898876542 1223333
Q ss_pred -ccc---CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhh
Q 017102 72 -PIE---HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS 143 (377)
Q Consensus 72 -p~~---~g~i~~~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a 143 (377)
|++ +|...+. +....+++++.. ..++ .....+++++|..++..+|+.+.+++ +.+|++.+.++++|.||
T Consensus 73 ~p~~~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~~~~~VitvPa~~~~~qr~a~~~a~-~~AGl~~~~li~Ep~AA 149 (509)
T 2v7y_A 73 TDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLG--EPVTRAVITVPAYFNDAQRQATKDAG-RIAGLEVERIINEPTAA 149 (509)
T ss_dssp SCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHH
T ss_pred CCcEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEecCHHHH
Confidence 554 5542222 222333333321 1122 23468999999999999999988876 88999999999999999
Q ss_pred hhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cCCceEEEcccHHHHHHHHHHHHHhc-----CCCccChh----
Q 017102 144 LYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA---- 206 (377)
Q Consensus 144 ~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~---- 206 (377)
++++|. .+.+|+|+|+++++++.+. +|.. +.......++||.++++.|.+++.++ +.++....
T Consensus 150 Alay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~ 229 (509)
T 2v7y_A 150 ALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQ 229 (509)
T ss_dssp HHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHH
T ss_pred HHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence 999886 4799999999999999776 3533 22233456899999999999888653 44432211
Q ss_pred -HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC------CC---ceEeeCCccccccccCCCCCCCCCCCCCh
Q 017102 207 -EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG---QVITIGAERFRCPEVLFQPSMIGMESAGI 276 (377)
Q Consensus 207 -~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------d~---~~i~i~~~~~~~~e~lf~p~~~~~~~~~l 276 (377)
-...++++|+.++... ...+.+| +| ..+.++.+++. .+|.|-. ..+
T Consensus 230 ~l~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~fe---~l~~~~~-----~~i 285 (509)
T 2v7y_A 230 RLKDAAEKAKKELSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKFE---ELSAHLV-----ERT 285 (509)
T ss_dssp HHHHHHHHHHHHTTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHHH---HHTHHHH-----HTT
T ss_pred HHHHHHHHHHHhcCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHHH---HHHHHHH-----HHH
Confidence 1355777777776431 1122222 23 12233433332 2333311 126
Q ss_pred hHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 277 ~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++|..+. +....+++|+||||+|++|++.++|++++.. .+..+.+|..++|.||+++|..
T Consensus 286 ~~~i~~~L~~a~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 286 MGPVRQALQDAG--LTPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHHHHT--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence 777778887664 2345678999999999999999999999842 2334678899999999999864
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=5.9e-24 Score=193.00 Aligned_cols=244 Identities=16% Similarity=0.159 Sum_probs=178.6
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHHHHH
Q 017102 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK 86 (377)
Q Consensus 7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~~~ 86 (377)
.-.++||+||.++|+.+..++. . .++. + .....|+++|.+.||+..+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~-~-----~l~~-----------------~---------~~~~~~l~~g~i~d~~~~~~ 75 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG-I-----PVAG-----------------A---------LKWASVVKDGLVVDYIGAIQ 75 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC-C-----EEEE-----------------E---------EEECCCCBTTBCTTHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC-c-----EEEE-----------------E---------eecccccCCCEEEcHHHHHH
Confidence 4579999999999998853321 1 1111 1 11236889999999999999
Q ss_pred HHHHhccccccc-CCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceEEE
Q 017102 87 IWHHTFYNELRV-APEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165 (377)
Q Consensus 87 ~~~~~~~~~L~~-~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~ 165 (377)
+|++++...... ......++++.|..+....|+. ++.+++.+|++...+..++.|++++++..+++|||+|+++|+++
T Consensus 76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~-~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~ 154 (272)
T 3h1q_A 76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAEA-CGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA 154 (272)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTH-HHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHH-HHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence 999997543332 2233567788887776666655 45567999999999999999999999999999999999999999
Q ss_pred EeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC
Q 017102 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 245 (377)
Q Consensus 166 pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p 245 (377)
++.+|.++ .....++||.++++.+.+.+. .+.+.++++|++++. .+++...
T Consensus 155 ~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~-----~~~~~~~------------- 205 (272)
T 3h1q_A 155 VIEKGKIT--ATFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSR-----HREIMRV------------- 205 (272)
T ss_dssp EEETTEEE--EECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTT-----HHHHHHH-------------
T ss_pred EEECCEEE--EEecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCC-----HHHHHHH-------------
Confidence 99999988 456789999999999998873 134568888888761 1111110
Q ss_pred CCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCC
Q 017102 246 DGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS 325 (377)
Q Consensus 246 d~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~ 325 (377)
.+.++. .+.+.+.+.+.+++ ..++|+||||+|++|||.++|++++..
T Consensus 206 --------------~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~---- 252 (272)
T 3h1q_A 206 --------------VRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK---- 252 (272)
T ss_dssp --------------HHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS----
T ss_pred --------------HHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC----
Confidence 011111 15566666666665 236999999999999999999999932
Q ss_pred CceEEEECCCCCccccchhhHHhh
Q 017102 326 SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 326 ~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
++..+++|+++.|.||+++|
T Consensus 253 ----~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 253 ----EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp ----CCBCCSSGGGHHHHHHHTTC
T ss_pred ----CccccCChHHHHHHHHHhcC
Confidence 33446789999999999875
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.91 E-value=9.4e-25 Score=208.02 Aligned_cols=304 Identities=16% Similarity=0.169 Sum_probs=194.5
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCC--------CCceEEeeCCCCccccCCCccceeccchhccc------Ccceee---
Q 017102 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR------GILTLK--- 70 (377)
Q Consensus 8 ~~vvID~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~------~~~~~~--- 70 (377)
..|.||+||+++.+++..+..|..+ +||+++...+ ...++|.+|.... ....++
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~~~~~~~~~k~~l 73 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTT---------SCEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECC---------CCEEECHHHHHhhhhCccceeehhHHhh
Confidence 4789999999999998865544433 5777665332 2344665544320 000011
Q ss_pred ---------------cccc-------------CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHH
Q 017102 71 ---------------YPIE-------------HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR 118 (377)
Q Consensus 71 ---------------~p~~-------------~g~i~~~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~ 118 (377)
+|+. +|..... +....+++++.. ..++ .....+++++|..++..+|
T Consensus 74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r 151 (383)
T 1dkg_D 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR 151 (383)
T ss_dssp TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence 1221 2322222 333445555431 1222 2336799999999999999
Q ss_pred HHHHhhhcccCCCCeEEeechhhhhhhhcCCc------eEEEEeCCCCceEEEEeeCC------eec-CCceEEEcccHH
Q 017102 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEG------YAL-PHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~v~pv~~g------~~l-~~~~~~~~~GG~ 185 (377)
+.+.+++ +.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+..+ ... .......++||.
T Consensus 152 ~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 230 (383)
T 1dkg_D 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (383)
T ss_dssp HHHHHHH-HHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred HHHHHHH-HHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence 9988875 889999999999999999988753 68999999999999988754 221 112345699999
Q ss_pred HHHHHHHHHHHhc-----CCCccChh-----HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCC-c--eEee
Q 017102 186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG-Q--VITI 252 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~-~--~i~i 252 (377)
++++.|.+++.++ +.++.... -...++++|++++..... .-..+..+..++| . .+.+
T Consensus 231 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~i 300 (383)
T 1dkg_D 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT----------DVNLPYITADATGPKHMNIKV 300 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEE----------EEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCce----------EEEEecccccCCCCeeEEEEE
Confidence 9999999988654 44432211 135677888887753100 0000011223344 2 2244
Q ss_pred CCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEE
Q 017102 253 GAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV 332 (377)
Q Consensus 253 ~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~ 332 (377)
+.+++. .+|+|.. ..+.+.|.++|.++.. ....+++|+||||+|++|++.++|++++.. ++.
T Consensus 301 t~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~ 362 (383)
T 1dkg_D 301 TRAKLE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR 362 (383)
T ss_dssp EHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCB
T ss_pred eHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCC
Confidence 443332 2333311 1266777778877652 345568999999999999999999999942 234
Q ss_pred CCCCCccccchhhHHhhcc
Q 017102 333 APPERKYSVWIGGSILASL 351 (377)
Q Consensus 333 ~~~~~~~~~w~Gasi~a~l 351 (377)
.+.+|.+++|.||+++|.+
T Consensus 363 ~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 363 KDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp CSSCTTTHHHHHHHHHTTT
T ss_pred CCcChHHHHHHHHHHHHHh
Confidence 5678999999999999875
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.90 E-value=5.8e-24 Score=203.28 Aligned_cols=301 Identities=18% Similarity=0.165 Sum_probs=185.6
Q ss_pred CCcEEEeCCCCceEEeeeCCCCCCCC--------CCceEEeeCCCCccccCCCccceeccchhcc--cC----cceeecc
Q 017102 7 IQPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK--RG----ILTLKYP 72 (377)
Q Consensus 7 ~~~vvID~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~--~~----~~~~~~p 72 (377)
..+|.||+||+++++++..+..|..+ +||+++.. ....++|++|... .. ...+++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~k~~ 87 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFT----------DDERLIGDAAKNQVAANPQNTIFDIKRL 87 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEEC----------SSCEEESHHHHHTGGGCGGGEECCGGGT
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEe----------CCcEEecHHHHHhhHhCcccCHHHHHHH
Confidence 56799999999999999987766533 25555543 2346678776543 11 1122222
Q ss_pred ccC--------------------------------C--ccCC-HHHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCC
Q 017102 73 IEH--------------------------------G--IVSN-WDDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNP 114 (377)
Q Consensus 73 ~~~--------------------------------g--~i~~-~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~ 114 (377)
+.. | .... -+....+++++. ...++ ..-..+++++|..++
T Consensus 88 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~~~~~~vitvP~~~~ 165 (394)
T 3qfu_A 88 IGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--TKVTHAVVTVPAYFN 165 (394)
T ss_dssp TTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCC
T ss_pred hCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--CCcceEEEEECCCCC
Confidence 211 1 0111 122333443332 11222 234689999999999
Q ss_pred HHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc------eEEEEeCCCCceEEEEee--CCeec-CCceEEEcccHH
Q 017102 115 KANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIY--EGYAL-PHAILRLDLAGR 185 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~v~pv~--~g~~l-~~~~~~~~~GG~ 185 (377)
..+|+.+.+.+ +.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++... .......++||.
T Consensus 166 ~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~ 244 (394)
T 3qfu_A 166 DAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGE 244 (394)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChH
Confidence 99999888877 889999999999999999998753 459999999999988775 33221 112334799999
Q ss_pred HHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEc---CCCceEee
Q 017102 186 DLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQVITI 252 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---pd~~~i~i 252 (377)
++++.+.+++.++ +........ ...++++|+.++.. ....+.+ .++..+.+
T Consensus 245 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~~~~~~~ 308 (394)
T 3qfu_A 245 DFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQ----------------MSTRIEIDSFVDGIDLSE 308 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTC----------------SEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccC----------------CcEEEEEEeccCCceeEE
Confidence 9999999888532 222211100 12344445444321 1112222 13333332
Q ss_pred CCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEE
Q 017102 253 GAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV 332 (377)
Q Consensus 253 ~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~ 332 (377)
.-.|..+ |-++.|. ...+.+.|.+.|.++..+ ...+++|+||||+|++|++.++|++.+.. .++.
T Consensus 309 ~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~v~ 373 (394)
T 3qfu_A 309 TLTRAKF-EELNLDL-----FKKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDG-------KKAS 373 (394)
T ss_dssp EEEHHHH-HHHHHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTT-------CCCB
T ss_pred EEEHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCC-------CCCC
Confidence 2222222 1122220 112566677777665433 45668999999999999999999988832 1334
Q ss_pred CCCCCccccchhhHHhhcc
Q 017102 333 APPERKYSVWIGGSILASL 351 (377)
Q Consensus 333 ~~~~~~~~~w~Gasi~a~l 351 (377)
.+.+|..++|.||+++|.+
T Consensus 374 ~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 374 KGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp CCSCTTTHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHh
Confidence 5668899999999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.88 E-value=5.7e-23 Score=197.07 Aligned_cols=302 Identities=17% Similarity=0.170 Sum_probs=183.7
Q ss_pred CCCcEEEeCCCCceEEeeeCCCCCCC--------CCCceEEeeCCCCccccCCCccceeccchhccc--CcceeeccccC
Q 017102 6 DIQPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GILTLKYPIEH 75 (377)
Q Consensus 6 ~~~~vvID~Gs~~~k~G~~~~~~P~~--------~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~~~~p~~~ 75 (377)
...+|.||+||+++++++..+..|.. .+||+++.. ....++|.+|.... ......+.+++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~Kr 91 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT----------DTERLIGDAAKNQVAMNPTNTIFDAKR 91 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEEC----------SSCEEETHHHHHTTTTCSTTEECCGGG
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEEC----------CCCEEecHHHHHhhHhChhhhHHHHHH
Confidence 35689999999999999987665542 335555432 23466787765431 11111122221
Q ss_pred Ccc--------------------------------------CC-HHHHHHHHHHhc---ccccccCCCCCcEEEEeCCCC
Q 017102 76 GIV--------------------------------------SN-WDDMEKIWHHTF---YNELRVAPEEHPILLTEAPLN 113 (377)
Q Consensus 76 g~i--------------------------------------~~-~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~ 113 (377)
..- .. .+....+++++. ...++ .....+++++|..+
T Consensus 92 ~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~--~~~~~~vitvPa~~ 169 (404)
T 3i33_A 92 LIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLG--GKVHSAVITVPAYF 169 (404)
T ss_dssp TTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEEEECTTC
T ss_pred HhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhc--cCCCcEEEEECCCC
Confidence 111 11 122333444432 11222 23457999999999
Q ss_pred CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc---------eEEEEeCCCCceEEEEee--CCee-cCCceEEEc
Q 017102 114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT---------TGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLD 181 (377)
Q Consensus 114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~---------~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~ 181 (377)
+..+|+.+.+++ +.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++.. +.......+
T Consensus 170 ~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~ 248 (404)
T 3i33_A 170 NDSQRQATKDAG-TITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 248 (404)
T ss_dssp CHHHHHHHHHHH-HHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETT
T ss_pred CHHHHHHHHHHH-HHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCC
Confidence 999999887775 889999999999999999988643 459999999999998774 4332 222334579
Q ss_pred ccHHHHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEc---CCCc
Q 017102 182 LAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQ 248 (377)
Q Consensus 182 ~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---pd~~ 248 (377)
+||.++++.+.+++.++ +........ ...+++.|+.++.. ....+.+ .++.
T Consensus 249 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~g~ 312 (404)
T 3i33_A 249 LGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS----------------TQASIEIDSLYEGV 312 (404)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTS----------------SEEEEEEEEEETTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcC----------------cceEEEEeeccCCc
Confidence 99999999999888432 222211100 13345555544321 1112221 1333
Q ss_pred eEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCce
Q 017102 249 VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMK 328 (377)
Q Consensus 249 ~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~ 328 (377)
.+.+.-.|..+ |-++.|- ...+.+.|.+.|..... ....++.|+||||+|++|++.++|++.+...
T Consensus 313 ~~~~~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~------ 378 (404)
T 3i33_A 313 DFYTSITRARF-EELNADL-----FRGTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK------ 378 (404)
T ss_dssp EEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTTC------
T ss_pred eeEEEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHHHHcCCC------
Confidence 33322222222 2222220 11145566666665432 2345688999999999999999999887321
Q ss_pred EEEECCCCCccccchhhHHhhcc
Q 017102 329 IKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 329 v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
++..+.+|..+++.||+++|.+
T Consensus 379 -~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 379 -ELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp -CCBCSSCTTTHHHHHHHHHHHH
T ss_pred -CCCCCcCHHHHHHHHHHHHHHH
Confidence 2345678999999999999875
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.85 E-value=4e-21 Score=192.57 Aligned_cols=298 Identities=17% Similarity=0.208 Sum_probs=188.6
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCC--------CCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeec--
Q 017102 8 QPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKY-- 71 (377)
Q Consensus 8 ~~vvID~Gs~~~k~G~~~~~~P~~--------~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~-- 71 (377)
..|.||+||+++.+++..+..|.+ .+||+++...+ ...++|.+|... +..+.+++
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~t~~~~Kr~i 73 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTT---------SCEEESHHHHTTTTTCGGGEEECGGGTT
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECC---------CcEEECHHHHHHhhhCCCCEeehhhHhh
Confidence 589999999999999886554442 35777665322 234566665432 01111111
Q ss_pred ----------------ccc-------------CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHH
Q 017102 72 ----------------PIE-------------HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR 118 (377)
Q Consensus 72 ----------------p~~-------------~g~i~~~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~ 118 (377)
|++ .|..... +....+++++.. ..++ ..-..+++++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~v~~~VitVPa~f~d~qr 151 (605)
T 2kho_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHC--SCCCEEEEEECTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEEECCCCCHHHH
Confidence 221 2222222 233444444421 2233 2235799999999999999
Q ss_pred HHHHhhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEEEee------CCee-cCCceEEEcccHH
Q 017102 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY------EGYA-LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~pv~------~g~~-l~~~~~~~~~GG~ 185 (377)
+.+.+++ +.+|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+. +|.. +.......++||.
T Consensus 152 ~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~ 230 (605)
T 2kho_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGG
T ss_pred HHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHH
Confidence 9888776 88999999999999999998874 3479999999999999886 3432 2222345689999
Q ss_pred HHHHHHHHHHHhc-----CCCccChh-----HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC------CC-c
Q 017102 186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG-Q 248 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------d~-~ 248 (377)
++++.|.+++.++ +.++.... -...++++|+.++... ...+.+| +| .
T Consensus 231 d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~ 294 (605)
T 2kho_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ----------------QTDVNLPYITADATGPK 294 (605)
T ss_dssp GTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------EEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEecccccCCCCce
Confidence 9999999888643 33332211 1244666777665321 1122222 23 1
Q ss_pred eE--eeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCC
Q 017102 249 VI--TIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS 326 (377)
Q Consensus 249 ~i--~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~ 326 (377)
.+ .++.+.| |-++.|- ...+.+.|.++|..... ....++.|+||||+|++|++.++|++.+..
T Consensus 295 ~~~~~itr~~f---e~l~~~~-----~~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~----- 359 (605)
T 2kho_A 295 HMNIKVTRAKL---ESLVEDL-----VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK----- 359 (605)
T ss_dssp EEEEEEEHHHH---HTTCCST-----TGGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSS-----
T ss_pred EEEEEEeHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCC-----
Confidence 22 3333332 2233331 12267788888877642 234568999999999999999999988842
Q ss_pred ceEEEECCCCCccccchhhHHhhcc
Q 017102 327 MKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 327 ~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+..+.+|..+++.||+++|..
T Consensus 360 ---~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 360 ---EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp ---CCBCSSCTTTHHHHHHHHHHTT
T ss_pred ---CcCcCCCcchHHHHHHHHHHHH
Confidence 1234568899999999999874
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.84 E-value=9.9e-21 Score=187.93 Aligned_cols=213 Identities=16% Similarity=0.211 Sum_probs=145.7
Q ss_pred CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-------ceEEEEeCCCCceEEEEee--CCee-
Q 017102 103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA- 172 (377)
Q Consensus 103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~v~pv~--~g~~- 172 (377)
..+++++|..++..+|+.+.+++ +.+|++.+.++++|.||+++++. .+.+|+|+|+++++++.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A~-~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 57999999999999999888765 88999999999999999998873 4689999999999999886 6754
Q ss_pred cCCceEEEcccHHHHHHHHHHHHHh-----cCCCccChh-----HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceE
Q 017102 173 LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242 (377)
Q Consensus 173 l~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~ 242 (377)
+.......++||+++++.|.+++.+ .+.++.... -...++++|+.++... ...+
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~i 282 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QASI 282 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEEE
Confidence 2334446799999999999988753 233332211 1244666666655321 1223
Q ss_pred EcC---CCceEe--eCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHH
Q 017102 243 ELP---DGQVIT--IGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS 316 (377)
Q Consensus 243 ~~p---d~~~i~--i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~ 316 (377)
.++ +|.... ++.+.+. ..+.+|.. +.+.|.++|.... +.+..++.|+||||+|++|++.++|+
T Consensus 283 ~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~---------i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~ 351 (554)
T 1yuw_A 283 EIDSLYEGIDFYTSITRARFEELNADLFRG---------TLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQ 351 (554)
T ss_dssp EETTCSSSCCEEEEEEHHHHHHHTHHHHHH---------TTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred EEeeccCCceEEEEEEHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHH
Confidence 332 333222 2222221 11222222 4456666666542 22345689999999999999999999
Q ss_pred HHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102 317 KEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 317 ~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
+.+... ++..+.+|..+++.||+++|.
T Consensus 352 ~~f~~~-------~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 352 DFFNGK-------ELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp HHTTTC-------CCBCCSCTTTHHHHHHHHHHH
T ss_pred HHcCCC-------ccccCCCchhHHHHHHHHHHH
Confidence 877432 233456889999999999986
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.83 E-value=1.2e-20 Score=190.66 Aligned_cols=213 Identities=10% Similarity=0.176 Sum_probs=146.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC------------ceEEEEeCCCCceEEEEee--
Q 017102 103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVSHTVPIY-- 168 (377)
Q Consensus 103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~~~lVVDiG~~~t~v~pv~-- 168 (377)
..+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 57999999999999999988876 88999999999999999987642 4689999999999999875
Q ss_pred CCee-cCCceEEEcccHHHHHHHHHHHHHh-----cCCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCC
Q 017102 169 EGYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSA 237 (377)
Q Consensus 169 ~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~ 237 (377)
+|.. +.......++||.++++.|.+++.. .+.++..... ...++.+|+.++...
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------- 282 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------- 282 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS---------------
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC---------------
Confidence 6654 3333345799999999999998853 2333221110 244666666554210
Q ss_pred ccceEEcC---CCce--EeeCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCCh
Q 017102 238 VEKSYELP---DGQV--ITIGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 311 (377)
Q Consensus 238 ~~~~~~~p---d~~~--i~i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~ 311 (377)
...+.++ ++.. +.++.+.|. +.+.++.. +.+.|.++|..... ...-++.|+||||+|++|++
T Consensus 283 -~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~---------i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v 350 (675)
T 3d2f_A 283 -NAPFSVESVMNDVDVSSQLSREELEELVKPLLER---------VTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTL 350 (675)
T ss_dssp -EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTT---------TTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHH
T ss_pred -ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHH
Confidence 1122222 1222 233333322 22333333 66677777765431 12345799999999999999
Q ss_pred HHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 312 ADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 312 ~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.++|++.+.. .+..+.+|..+++.||+++|..
T Consensus 351 ~~~l~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 351 KQSISEAFGK--------PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHHHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence 9999988842 2345678899999999999863
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.82 E-value=1.5e-20 Score=180.58 Aligned_cols=221 Identities=14% Similarity=0.169 Sum_probs=141.9
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc--------eEEEEeCCCCceEEEEe--eCC
Q 017102 101 EEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI--YEG 170 (377)
Q Consensus 101 ~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--------~~lVVDiG~~~t~v~pv--~~g 170 (377)
....+++++|..++..+|+.+.+.+ +..|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+ .+|
T Consensus 149 ~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~ 227 (409)
T 4gni_A 149 KVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSG 227 (409)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETT
T ss_pred CCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCC
Confidence 3467999999999999999888777 889999999999999999998764 58999999999999875 333
Q ss_pred ee-cCCceEEEcccHHHHHHHHHHHHHhc-----C--CCccChh-H----HHHHHHHhHhcceeecCHHHHHHHhccCCC
Q 017102 171 YA-LPHAILRLDLAGRDLTDALMKILTER-----G--YSFTTTA-E----REIVRDMKEKLAYIALDYEQELETAKTSSA 237 (377)
Q Consensus 171 ~~-l~~~~~~~~~GG~~l~~~l~~~l~~~-----~--~~~~~~~-~----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~ 237 (377)
.. +.......++||.++++.|.+++..+ + .+..... . ...++.+|+.++..
T Consensus 228 ~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~---------------- 291 (409)
T 4gni_A 228 MYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRS---------------- 291 (409)
T ss_dssp EEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHS----------------
T ss_pred eEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCC----------------
Confidence 21 11222357999999999999888642 1 1111100 0 12345555543311
Q ss_pred ccceEEc---CCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHH
Q 017102 238 VEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314 (377)
Q Consensus 238 ~~~~~~~---pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~r 314 (377)
....+.+ .++....+.-.|..+ |-++.|- ...+.+.|.+.|.+.. .....++.|+||||+|++|++.++
T Consensus 292 ~~~~i~i~~~~~~~~~~~~itr~~~-~~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~V~LvGG~s~~p~v~~~ 363 (409)
T 4gni_A 292 TNASFSVESLIDGLDFASTINRLRY-ETIARTV-----FEGFNRLVESAVKKAG--LDPLDVDEVIMSGGTSNTPRIAAN 363 (409)
T ss_dssp SEEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHHHHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHH
T ss_pred CceEEEeecccCCcceEEEeeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CCHHHCCEEEEECCccccHHHHHH
Confidence 0111222 123322222222222 2223330 0114555556665442 223456889999999999999999
Q ss_pred HHHHHhhhCCCCceEEE------ECCCCCccccchhhHHhhccc
Q 017102 315 MSKEISALAPSSMKIKV------VAPPERKYSVWIGGSILASLS 352 (377)
Q Consensus 315 l~~el~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~l~ 352 (377)
|++.+.. ++++ ....+|..++-.||++++...
T Consensus 364 l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 364 FRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp HHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 9877733 2345 234588999999999998764
No 18
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.77 E-value=3.8e-19 Score=178.27 Aligned_cols=304 Identities=17% Similarity=0.168 Sum_probs=179.4
Q ss_pred CcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccc
Q 017102 8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI 73 (377)
Q Consensus 8 ~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~ 73 (377)
.+|.||+||+++.+++..+..|. ..+||+++...+ ...++|.+|... ...+.+++.+
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Krll 73 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GCTLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTT---------SCEEESHHHHHTTTTCGGGEECCGGGTT
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCC---------CcEEecHHHHHHHHhCCCcEehhhHHhh
Confidence 57999999999999987554443 344666655422 235567665432 1111222222
Q ss_pred cC-------------------------------CccCC-HHHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHH
Q 017102 74 EH-------------------------------GIVSN-WDDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANR 118 (377)
Q Consensus 74 ~~-------------------------------g~i~~-~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~ 118 (377)
.. |.... .+....+++++. ...|+. .-..+++++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr 151 (605)
T 4b9q_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHH
T ss_pred CCCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence 11 11112 233344444443 123332 335799999999999999
Q ss_pred HHHHhhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEEEeeCCe------e-cCCceEEEcccHH
Q 017102 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEGY------A-LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~pv~~g~------~-l~~~~~~~~~GG~ 185 (377)
+.+.+++ +..|++.+.++++|.||++++|. .+.+|+|+|+++++++.+.-+. . +.......++||.
T Consensus 152 ~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~ 230 (605)
T 4b9q_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHH
T ss_pred HHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChH
Confidence 8877776 88999999999999999998863 4679999999999999876433 1 1122234688999
Q ss_pred HHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC---CceEee
Q 017102 186 DLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD---GQVITI 252 (377)
Q Consensus 186 ~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd---~~~i~i 252 (377)
++++.+.+++..+ +.+...... ...++.+|..++.... ......+...+ +..+.+
T Consensus 231 d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~------------~~i~~~~~~~~~~g~~~~~~ 298 (605)
T 4b9q_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ------------TDVNLPYITADATGPKHMNI 298 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSE------------EEEEEEEEEECSSSEEEEEE
T ss_pred HHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCC------------eEEEEeeeccCCCCCeeEEE
Confidence 9999999888642 222211111 2335555555442110 00011111111 112222
Q ss_pred CCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEE
Q 017102 253 GAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV 332 (377)
Q Consensus 253 ~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~ 332 (377)
.-.|..+ |-++.|- ...+.+.|.+++..... ...-++.|+||||+|++|++.+++++.+.. .+.
T Consensus 299 ~itr~~~-e~l~~~~-----~~~i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~~fg~--------~~~ 362 (605)
T 4b9q_A 299 KVTRAKL-ESLVEDL-----VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR 362 (605)
T ss_dssp EEEHHHH-HHHHHHH-----HHHTTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------CCC
T ss_pred EEeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHHHHhcc--------CcC
Confidence 2122222 1122220 00134455555554321 223457899999999999999999988832 123
Q ss_pred CCCCCccccchhhHHhhcc
Q 017102 333 APPERKYSVWIGGSILASL 351 (377)
Q Consensus 333 ~~~~~~~~~w~Gasi~a~l 351 (377)
.+.+|..++-.||+++|..
T Consensus 363 ~~~nPdeaVA~GAai~a~~ 381 (605)
T 4b9q_A 363 KDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp SSSCTTTHHHHHHHHHHHH
T ss_pred CCcChhHHHHHhHHHHHHH
Confidence 4567899999999999864
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.73 E-value=2.3e-17 Score=156.59 Aligned_cols=173 Identities=16% Similarity=0.231 Sum_probs=109.1
Q ss_pred HHHHHHhhhcccCCCCeEEeechhhhhhhhcC-------CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHH
Q 017102 117 NREKMTQIMFETFNAPAMYVAIQAVLSLYASG-------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189 (377)
Q Consensus 117 ~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~ 189 (377)
..+.+.+++ +.+|++.+.+..+|+|++.+++ ..+.+|||+|+++|+++.+.+|.++ .....++||.++++
T Consensus 152 ~v~~~~~~~-~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~~~GG~~i~~ 228 (377)
T 2ych_A 152 AVAGVLEAL-RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVLTLSGKDFTE 228 (377)
T ss_dssp HHHHHHHHH-HHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHH
T ss_pred HHHHHHHHH-HHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE--EEEeeechHHHHHH
Confidence 345555555 8899999999999999998864 2456999999999999999999887 56788999999999
Q ss_pred HHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCC
Q 017102 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI 269 (377)
Q Consensus 190 ~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~ 269 (377)
.+.+.+ +. +.+.++++|.++++...+..++ ...+.+++ ..+.++.+. +.|++ .|
T Consensus 229 ~i~~~~---~~------~~~~aE~~K~~~~~~~~~~~~~----------~~~i~~~~-~~~~i~~~~--~~~~i-~~--- 282 (377)
T 2ych_A 229 AIARSF---NL------DLLAAEEVKRTYGMATLPTEDE----------ELLLDFDA-ERERYSPGR--IYDAI-RP--- 282 (377)
T ss_dssp HHHHHT---TC------CHHHHHHHHHHTC------------------------------------C--HHHHH-HH---
T ss_pred HHHHHh---CC------CHHHHHHHHhhccccccccccc----------cccccccc-ccccCCHHH--HHHHH-HH---
Confidence 988743 22 2456899999988754321110 00111221 111222111 11111 11
Q ss_pred CCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHh
Q 017102 270 GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIS 320 (377)
Q Consensus 270 ~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~ 320 (377)
....+.+.|.++|..++...+....++|+||||+|++||+.+++++++.
T Consensus 283 --~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 283 --VLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp --HHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 0011455566666555444555678899999999999999999999994
No 20
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.72 E-value=1.1e-17 Score=156.67 Aligned_cols=177 Identities=15% Similarity=0.129 Sum_probs=125.2
Q ss_pred cEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCcccc------C--------CCccceeccchhcccCcceeecccc
Q 017102 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG------M--------GQKDAYVGDEAQSKRGILTLKYPIE 74 (377)
Q Consensus 9 ~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~------~--------~~~~~~vg~~~~~~~~~~~~~~p~~ 74 (377)
.+.||+|+.++|+-. ++ .-...+||.++........++ . .+..+.||++|. +|++
T Consensus 23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l~ 91 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQG 91 (346)
T ss_dssp EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCSS
T ss_pred EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------cccC
Confidence 689999999999863 33 224468898876654321100 0 134566776653 8899
Q ss_pred CCccCCHHHHHHHHHHhccccc-ccCCCCCcEE--EEeCCCCCHHHHHHHHhhhccc-------------CCCCeEEeec
Q 017102 75 HGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPIL--LTEAPLNPKANREKMTQIMFET-------------FNAPAMYVAI 138 (377)
Q Consensus 75 ~g~i~~~~~~~~~~~~~~~~~L-~~~~~~~~vv--l~~p~~~~~~~~~~l~~~lfe~-------------~~~~~v~~~~ 138 (377)
.+.+.+ +..+.++.+.+.+.. ........++ ++.|......+|+.+.+.+... +++..|.+++
T Consensus 92 ~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~ 170 (346)
T 2fsj_A 92 DGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP 170 (346)
T ss_dssp TTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred CCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence 999988 666666666653322 1112335689 9999988888888888876432 1356799999
Q ss_pred hhhhhhhhc--C-----C-ceEEEEeCCCCceEEEEee--CCeecCCceEEEcccHHHHHHHHHHHHHh
Q 017102 139 QAVLSLYAS--G-----R-TTGIVLDSGDGVSHTVPIY--EGYALPHAILRLDLAGRDLTDALMKILTE 197 (377)
Q Consensus 139 ~~~~a~~~~--g-----~-~~~lVVDiG~~~t~v~pv~--~g~~l~~~~~~~~~GG~~l~~~l~~~l~~ 197 (377)
+|.+|++++ + . .+.+|||+|+++|+++.+. +|.++.......++||+++++++.+.+++
T Consensus 171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~ 239 (346)
T 2fsj_A 171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAK 239 (346)
T ss_dssp TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHH
Confidence 999999974 2 1 4559999999999999998 78766655678899999999999887754
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.64 E-value=1.6e-15 Score=145.17 Aligned_cols=200 Identities=12% Similarity=0.151 Sum_probs=131.9
Q ss_pred CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102 114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 188 (377)
Q Consensus 114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~ 188 (377)
++...+.+.+++ +..|+....++.+|+|+++++.. .+.+|||+|+++|+++.+.+|.+. .....++||++++
T Consensus 166 ~~~~v~n~~~~~-~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~GG~~it 242 (419)
T 4a2a_A 166 PLKVYEMFYNFL-QDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVI 242 (419)
T ss_dssp EHHHHHHHHHHH-HTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESCCHHHHH
T ss_pred eHHHHHHHHHHH-HHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE--EEEecccHHHHHH
Confidence 344556666665 88999999999999999998765 368999999999999999999988 5678999999999
Q ss_pred HHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC--C-ceEeeCCccc-cccccCC
Q 017102 189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QVITIGAERF-RCPEVLF 264 (377)
Q Consensus 189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd--~-~~i~i~~~~~-~~~e~lf 264 (377)
+.+.+.+. ...+.+|++|.+++...... .....+.+|. + ....++...+ .+.+..+
T Consensus 243 ~dIa~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~v 302 (419)
T 4a2a_A 243 KDVSAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARL 302 (419)
T ss_dssp HHHHHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHH
Confidence 99988762 13467999999887542210 0111222221 1 1122221111 1111111
Q ss_pred CCCCCCCCCCChhHHHHHHHhcCCH----HHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEEC-----C-
Q 017102 265 QPSMIGMESAGIHETTYNSIMKCDV----DIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA-----P- 334 (377)
Q Consensus 265 ~p~~~~~~~~~l~~~I~~~i~~~~~----~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~-----~- 334 (377)
+. +.+.|.+.|..... .......+.|+||||+|++||+.+.+++.+.. ++++.. |
T Consensus 303 ee---------i~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~ 367 (419)
T 4a2a_A 303 RE---------IMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS------PVRTGCYANSDRP 367 (419)
T ss_dssp HH---------HHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSC
T ss_pred HH---------HHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC------CeEEEecCCCCch
Confidence 11 45556666655432 11345678899999999999999999999843 455554 3
Q ss_pred ---------CCCccccchhhHHhhcc
Q 017102 335 ---------PERKYSVWIGGSILASL 351 (377)
Q Consensus 335 ---------~~~~~~~w~Gasi~a~l 351 (377)
.+|.|+.-.|-.+++..
T Consensus 368 ~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 368 SIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp CCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred hccCcccccCCchHHHHHHHHHHHhh
Confidence 36788888888777754
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.52 E-value=2.3e-14 Score=132.69 Aligned_cols=179 Identities=12% Similarity=0.120 Sum_probs=106.8
Q ss_pred cccCCCCeEEeechhhhhhhhcC-----CceEEEEeCCCCceEEEEeeCCee-cCCceEEEcccHHHHHHHHHHHHHhcC
Q 017102 126 FETFNAPAMYVAIQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDALMKILTERG 199 (377)
Q Consensus 126 fe~~~~~~v~~~~~~~~a~~~~g-----~~~~lVVDiG~~~t~v~pv~~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~~~ 199 (377)
.+.+++..+.++++|++|+++++ ..+.+|||+|+++|+++.+.+|.+ +.......++||.++++.+.+.+.+++
T Consensus 135 ~~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~ 214 (320)
T 2zgy_A 135 GDTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 214 (320)
T ss_dssp BCCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCS
T ss_pred CcEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcC
Confidence 34566789999999999998763 357899999999999999999876 433456779999999999999886543
Q ss_pred CCccChhHHHHHHHH-hHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhH
Q 017102 200 YSFTTTAEREIVRDM-KEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHE 278 (377)
Q Consensus 200 ~~~~~~~~~~~~~~i-k~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~ 278 (377)
..+ ....++++ |.+.... +. .... ..|. ......+. +.+ -...+.+
T Consensus 215 ~~i----~~~~ae~~lk~~~~~~---~~---~~~i---------~~~~--------~~~~~~~~-i~~-----~~~~~~~ 261 (320)
T 2zgy_A 215 TKG----SSYLADDIIIHRKDNN---YL---KQRI---------NDEN--------KISIVTEA-MNE-----ALRKLEQ 261 (320)
T ss_dssp BGG----GHHHHHHHHHTTTCHH---HH---HHHS---------SSSC--------THHHHHHH-HHH-----HHHHHHH
T ss_pred CCC----CHHHHHHHHHHhhhhh---cc---ccee---------cCch--------hhHHHHHH-HHH-----HHHHHHH
Confidence 222 23456666 5441100 00 0000 0000 00000000 000 0001233
Q ss_pred HHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102 279 TTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 279 ~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|.+.+.+. ...+.|+||||+|.+ +.+.|+ +.++... -++..+++|+++.-.|+.++++
T Consensus 262 ~i~~~i~~~------~~~~~vvl~GGga~l--l~~~l~----~~~~~~~-~~~~~~~~P~~a~A~G~~~~~~ 320 (320)
T 2zgy_A 262 RVLNTLNEF------SGYTHVMVIGGGAEL--ICDAVK----KHTQIRD-ERFFKTNNSQYDLVNGMYLIGN 320 (320)
T ss_dssp HHHHHHTTC------CCCCEEEEESTTHHH--HHHHHH----HTSCCCG-GGEECCSCGGGHHHHHHHHHHC
T ss_pred HHHHHHHhh------cCCCeEEEECChHHH--HHHHHH----HHhCCCC-CceeeCCCcHHHHHHHHHHhcC
Confidence 333344332 234789999999987 554444 4443210 0244567899999999998863
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.47 E-value=2.4e-14 Score=132.86 Aligned_cols=185 Identities=12% Similarity=0.057 Sum_probs=115.4
Q ss_pred CCCCCCcEEEeCCCCceEEeee--C---CCCCCCCCCceEEeeCCCC-------ccccCCCccceeccchhcccCcceee
Q 017102 3 DTEDIQPLVCDNGTGMVKAGFA--G---DDAPRAVFPSIVGRPRHTG-------VMVGMGQKDAYVGDEAQSKRGILTLK 70 (377)
Q Consensus 3 ~~~~~~~vvID~Gs~~~k~G~~--~---~~~P~~~~ps~~~~~~~~~-------~~~~~~~~~~~vg~~~~~~~~~~~~~ 70 (377)
.+.+.-.|.||+|-.++|+-.. + +..-+..|||.++...... ..+..++..++||+.+...
T Consensus 3 ~~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~------- 75 (329)
T 4apw_A 3 NITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED------- 75 (329)
T ss_dssp --CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC-------
T ss_pred CccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc-------
Confidence 3445567899999999998753 2 1223457888876543311 1223456677888865321
Q ss_pred ccccCCccCCHHHHHHHHHHhcccccccC-CCCCcEEEEeCCCCCH--HHHHHHHhhhccc-------------CCCCeE
Q 017102 71 YPIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPILLTEAPLNPK--ANREKMTQIMFET-------------FNAPAM 134 (377)
Q Consensus 71 ~p~~~g~i~~~~~~~~~~~~~~~~~L~~~-~~~~~vvl~~p~~~~~--~~~~~l~~~lfe~-------------~~~~~v 134 (377)
-....... +....++..++...+... ..+-.+++..|...-. .+|+.+.+.+-.. +.+..|
T Consensus 76 -~~~~~k~~--~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v 152 (329)
T 4apw_A 76 -SSETSKTN--LIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDI 152 (329)
T ss_dssp -SGGGCCCT--THHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEE
T ss_pred -cccCCcCc--hhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEE
Confidence 11112211 234444444432334322 1223455666644332 2344555544321 224579
Q ss_pred EeechhhhhhhhcC----CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHh
Q 017102 135 YVAIQAVLSLYASG----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 197 (377)
Q Consensus 135 ~~~~~~~~a~~~~g----~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~ 197 (377)
.+.|++..|++... ..+.+|||+|+++|+++.+.+|.++......+++||.++++.+.+.+.+
T Consensus 153 ~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 153 TIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 99999999998762 3578999999999999999999998777778999999999999887754
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.44 E-value=1.7e-13 Score=128.27 Aligned_cols=185 Identities=14% Similarity=0.161 Sum_probs=117.9
Q ss_pred CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc---------------cccCCCcc-ceeccchhcccCcceeec
Q 017102 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------------MVGMGQKD-AYVGDEAQSKRGILTLKY 71 (377)
Q Consensus 8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~---------------~~~~~~~~-~~vg~~~~~~~~~~~~~~ 71 (377)
-.|.||+|-.++|+ ..++ -.+.|||.++...+... .+..+... ++||+.|...... ..+
T Consensus 5 ~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~~ 79 (355)
T 3js6_A 5 YVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GKD 79 (355)
T ss_dssp EEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CEE
T ss_pred EEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--ccc
Confidence 37899999999996 4444 24678998875433211 11123445 7889877543111 112
Q ss_pred cc-cCCccCCHHHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHH-HHHHhhhccc-----------CCCCeEE
Q 017102 72 PI-EHGIVSNWDDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANR-EKMTQIMFET-----------FNAPAMY 135 (377)
Q Consensus 72 p~-~~g~i~~~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~-~~l~~~lfe~-----------~~~~~v~ 135 (377)
.+ ......+-+ ...++...+ ...+.....+-.+++..|......++ +.+.+.+... +.+..|.
T Consensus 80 ~~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~ 158 (355)
T 3js6_A 80 TASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVK 158 (355)
T ss_dssp CCCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEE
T ss_pred ccccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEE
Confidence 22 233443322 222222222 12121111123577778877665555 4666666432 2236899
Q ss_pred eechhhhhhhhcC-----------CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhc
Q 017102 136 VAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 198 (377)
Q Consensus 136 ~~~~~~~a~~~~g-----------~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~ 198 (377)
++++|.+|+++++ ..+.+|||+|+++|+++.+.+|.++.....++++||..+++.+.+.+.++
T Consensus 159 v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 159 IVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999875 35679999999999999999999987777889999999999999998654
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.87 E-value=3.8e-09 Score=100.65 Aligned_cols=180 Identities=12% Similarity=0.114 Sum_probs=106.9
Q ss_pred chhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHH
Q 017102 138 IQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR 212 (377)
Q Consensus 138 ~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (377)
-+|.||.+++=. ...++||+|+++|+++.+.+|..+ +...+++||++++..+..-|. ..+...+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~DIA~~Lg--------t~d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIARELG--------LEDRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHHT--------CCCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence 677777776532 467899999999999999999988 778899999999999998882 12367899
Q ss_pred HHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEee--CCc-cccccc-cCCCCCC-CCCCCCC--hhH--HHHHH
Q 017102 213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPSM-IGMESAG--IHE--TTYNS 283 (377)
Q Consensus 213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i--~~~-~~~~~e-~lf~p~~-~~~~~~~--l~~--~I~~~ 283 (377)
++|. ++...... . .....+...+++ ... ...++. .+..|+. ... .+. +.+ ++.+.
T Consensus 460 rIK~-YG~A~ve~-----------l---f~~~dede~Iev~~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEElelVR~~ 523 (610)
T 2d0o_A 460 EIKK-YPLAKVES-----------L---FHLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPL-PGDLALEKVRAIRRS 523 (610)
T ss_dssp HHHH-SCEEEECS-----------S---SEEEETTSCEEECSSCCCGGGTTCEEEECSSCEEEC-CTTCCHHHHHHHHHH
T ss_pred Hhcc-cCceeecc-----------c---ccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHHHHHHHHH
Confidence 9999 87654321 0 000001112222 000 000111 0000010 011 112 333 33333
Q ss_pred HhcC---CHHHH-----Hhh-----hcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC-----CCCccccchhh
Q 017102 284 IMKC---DVDIR-----KDL-----YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP-----PERKYSVWIGG 345 (377)
Q Consensus 284 i~~~---~~~~r-----~~l-----~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~-----~~~~~~~w~Ga 345 (377)
+.+. -..+| ..+ +..||||||+|+++|+.+-.++.|..+ .+++-.| ..|.|++-.|-
T Consensus 524 ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y-----~VRiGrP~~~gv~gP~fAtAvGL 598 (610)
T 2d0o_A 524 AKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY-----RLVAGRGNIRGSEGPRNAVATGL 598 (610)
T ss_dssp HHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS-----SCEEEECCGGGTSTTSCHHHHHH
T ss_pred HhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCCcHHHHHHH
Confidence 1111 00111 112 256999999999999999999888662 4555443 36788888886
Q ss_pred HHh
Q 017102 346 SIL 348 (377)
Q Consensus 346 si~ 348 (377)
.+|
T Consensus 599 lly 601 (610)
T 2d0o_A 599 ILS 601 (610)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.86 E-value=3.5e-09 Score=101.24 Aligned_cols=180 Identities=12% Similarity=0.122 Sum_probs=106.1
Q ss_pred chhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHH
Q 017102 138 IQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR 212 (377)
Q Consensus 138 ~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (377)
-+|.||.+++=. ...++||+|+++|+++.+.+|..+ +...+++||++++..+..-|. ..+...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg--------~~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELG--------LEDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHT--------CSCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence 677777776532 467899999999999999999888 778899999999999998882 12367899
Q ss_pred HHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEee--CCc-cccccc-cCCCCC-CCCCCCCC--hhH--HHHHH
Q 017102 213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPS-MIGMESAG--IHE--TTYNS 283 (377)
Q Consensus 213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i--~~~-~~~~~e-~lf~p~-~~~~~~~~--l~~--~I~~~ 283 (377)
++|. ++...... . .....+...+++ ... ...++. .+..|+ +... .+. +.+ ++.+.
T Consensus 462 rIK~-YG~A~~e~-----------l---f~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEElelVR~~ 525 (607)
T 1nbw_A 462 AIKK-YPLAKVES-----------L---FSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPI-DNASPLEKIRLVRRQ 525 (607)
T ss_dssp HHHH-SCEEEECS-----------S---SEEEETTSCEEECSSCCCGGGTTCEEEEETTEEEEE-CCSSCHHHHHHHHHH
T ss_pred Hhcc-cCceeecc-----------c---ccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHHHHHHHHH
Confidence 9999 87654321 0 000001111221 000 000000 000000 0011 111 333 33333
Q ss_pred HhcC---CHHHHH----------hhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC-----CCCccccchhh
Q 017102 284 IMKC---DVDIRK----------DLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP-----PERKYSVWIGG 345 (377)
Q Consensus 284 i~~~---~~~~r~----------~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~-----~~~~~~~w~Ga 345 (377)
+.+. -..+|. ..+..||||||+|+++|+.+-.++.|..+ .+++-.| ..|.|++-.|-
T Consensus 526 ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGL 600 (607)
T 1nbw_A 526 AKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGL 600 (607)
T ss_dssp HHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHH
T ss_pred HhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHH
Confidence 1111 011111 11256999999999999999999999773 3444433 36788888886
Q ss_pred HHh
Q 017102 346 SIL 348 (377)
Q Consensus 346 si~ 348 (377)
.+|
T Consensus 601 lly 603 (607)
T 1nbw_A 601 LLA 603 (607)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.58 E-value=4.7e-08 Score=88.12 Aligned_cols=51 Identities=25% Similarity=0.448 Sum_probs=42.2
Q ss_pred HHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102 292 RKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 292 r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
+....+.|+++||.|+.|+++++|++.+. .++..|++|++..-.||+++|.
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHHH
Confidence 44556789999999999999999988772 2466788899998999999984
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.60 E-value=0.00032 Score=62.66 Aligned_cols=48 Identities=17% Similarity=0.383 Sum_probs=39.0
Q ss_pred hcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||.++.+++.+.+.+.|.. ++..++.++++.-.||+++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 36799999999999999999988833 3555667778889999999854
No 29
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.73 E-value=0.0027 Score=57.88 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=52.1
Q ss_pred HHHHHHHhhhcccCCCCeEEeechhh---hhhh----hcC-CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHH
Q 017102 116 ANREKMTQIMFETFNAPAMYVAIQAV---LSLY----ASG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~~~~---~a~~----~~g-~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l 187 (377)
..++.+++.+.+..|++ |.++...- ++.+ +.+ ..+++|||+|+++|.++-+.++.+. ...++|+|+-.+
T Consensus 97 ~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l 173 (315)
T 1t6c_A 97 KNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNL 173 (315)
T ss_dssp TTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHH
Confidence 45566677776677876 34444322 2221 123 5679999999999999999899886 667899999888
Q ss_pred HHHH
Q 017102 188 TDAL 191 (377)
Q Consensus 188 ~~~l 191 (377)
++.+
T Consensus 174 ~e~~ 177 (315)
T 1t6c_A 174 TETF 177 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 30
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.48 E-value=0.022 Score=50.85 Aligned_cols=50 Identities=18% Similarity=0.004 Sum_probs=40.6
Q ss_pred hhcCeEEecC-CCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102 295 LYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 295 l~~nIvl~GG-~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
-+++|+++|| .+..|++.++|.+.+.-. ..++.-++++++....||++++
T Consensus 236 ~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 236 KTENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp TCCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTC
T ss_pred CCCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhC
Confidence 3457999999 999999999999776442 3466668889999999999876
No 31
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.27 E-value=0.017 Score=51.80 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=40.2
Q ss_pred HHhhhcccCCCCeEEeechhhhhhhhc-----CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102 121 MTQIMFETFNAPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
+.+.+ +.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|++..
T Consensus 87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 142 (292)
T 2gup_A 87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHR 142 (292)
T ss_dssp HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEe
Confidence 55666 778888 78999999998873 5678999999986 6677788987764
No 32
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.87 E-value=0.0035 Score=57.78 Aligned_cols=75 Identities=17% Similarity=0.174 Sum_probs=48.5
Q ss_pred HHHHHHHhhhcccCCCCeEEeec---hhhhhhhhc--------CCceEEEEeCCCCceEEEEeeC--Ceec--CCceEEE
Q 017102 116 ANREKMTQIMFETFNAPAMYVAI---QAVLSLYAS--------GRTTGIVLDSGDGVSHTVPIYE--GYAL--PHAILRL 180 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~~--------g~~~~lVVDiG~~~t~v~pv~~--g~~l--~~~~~~~ 180 (377)
..++.+++.+.+.+|++ |.+++ ++.++.++. ....++|||||+++|.++.+.+ +.+. .....++
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 33455666665666765 33333 333333322 2256999999999999998877 4331 1256789
Q ss_pred cccHHHHHHHH
Q 017102 181 DLAGRDLTDAL 191 (377)
Q Consensus 181 ~~GG~~l~~~l 191 (377)
|+|+-.+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999988876
No 33
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=95.72 E-value=0.033 Score=51.19 Aligned_cols=56 Identities=9% Similarity=0.070 Sum_probs=40.7
Q ss_pred HHhhhcCeEEecC-CCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102 292 RKDLYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 292 r~~l~~nIvl~GG-~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
++.-+++|+++|| .++.|++.+.|.+.|.---.. .+++.-++++++.-.+||++++
T Consensus 302 ~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 302 LNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 3444468999999 999999999999988521111 2334445678999999998764
No 34
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.58 E-value=0.16 Score=46.14 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=35.9
Q ss_pred ccCCCCeEEeechhhhhhhh-------cCCceEEEEeCCCCceEEEEeeCCeecC
Q 017102 127 ETFNAPAMYVAIQAVLSLYA-------SGRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~-------~g~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
+.+++| |.+.++.-+++++ .+..+.++|-+|.+ +-...|.+|.++.
T Consensus 94 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 94 QRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred hhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 456787 8899999988875 24578899999977 7777788998774
No 35
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.47 E-value=0.11 Score=47.38 Aligned_cols=52 Identities=21% Similarity=0.251 Sum_probs=36.6
Q ss_pred CeEEecCCCCCCChHHHHHHHHhhhCCC-CceEEEECCCCCccccchhhHHhh
Q 017102 298 NIVLSGGSTMFPGIADRMSKEISALAPS-SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~el~~~~~~-~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+-|.+++++.+.+.... ..++++..+.-...+.-.||+.++
T Consensus 272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 5889999888877888888888776532 224555555444567778988765
No 36
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.41 E-value=0.044 Score=53.35 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=50.7
Q ss_pred HHHHHHHhhhcccCCCCeEEeech---hhhhhhh----cC-CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHH
Q 017102 116 ANREKMTQIMFETFNAPAMYVAIQ---AVLSLYA----SG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~~---~~~a~~~----~g-~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l 187 (377)
..+..+++.+-+..|++ |.+++. +-+...+ .. ...++|||||+++|.++-..++.+. ...++|+|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHH
Confidence 44456677776778876 334442 2222222 12 2379999999999999999888887 667899999888
Q ss_pred HHHH
Q 017102 188 TDAL 191 (377)
Q Consensus 188 ~~~l 191 (377)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 37
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=95.29 E-value=0.053 Score=52.67 Aligned_cols=72 Identities=21% Similarity=0.216 Sum_probs=49.8
Q ss_pred HHHHHHHhhhcccCCCCeEEeec---hhhhhhh----hcCCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102 116 ANREKMTQIMFETFNAPAMYVAI---QAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 188 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~----~~g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~ 188 (377)
..+..+++.+.+.+|++ |.+++ ++-+..+ +.....++|||||+++|.++-+.+|.+. ...++|+|.-.++
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLS 176 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehh
Confidence 34455666666667776 33443 3332222 2234578999999999999999999887 6678999997777
Q ss_pred HH
Q 017102 189 DA 190 (377)
Q Consensus 189 ~~ 190 (377)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 38
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=95.10 E-value=0.19 Score=45.61 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=35.8
Q ss_pred ccC-CCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102 127 ETF-NAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~-~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
+.+ ++| |++.++.-|++++. +..+.++|-+|.+ +-...|.+|+++.
T Consensus 115 ~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~ 168 (321)
T 3r8e_A 115 SEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI 168 (321)
T ss_dssp HHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence 456 776 78999998887642 4578999999987 7777788998875
No 39
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.09 E-value=1.1 Score=39.99 Aligned_cols=52 Identities=12% Similarity=0.210 Sum_probs=37.9
Q ss_pred cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102 297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
+.|+|.||.+..+.|.+++++.+...... .+++..+.-.+.+.-.||+.++.
T Consensus 239 ~~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 239 THIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp SEEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred CEEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence 35899999999899999999999866543 23444444445678889887664
No 40
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=94.93 E-value=0.19 Score=45.18 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=34.6
Q ss_pred ccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecCC
Q 017102 127 ETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~~ 175 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|++...
T Consensus 96 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 96 EATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 456777 77899988887643 3578899999876 55666778887643
No 41
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.53 E-value=0.12 Score=46.77 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=35.7
Q ss_pred ccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102 127 ETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...+.+|.+..
T Consensus 106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 445777 78999999988752 4578999999987 6677788988765
No 42
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=93.47 E-value=0.042 Score=49.69 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=23.6
Q ss_pred ceEEEEeCCCCceEEEEeeCCeecC
Q 017102 150 TTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 150 ~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
.++++||||+++|+|+|+.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 6799999999999999999999985
No 43
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=93.43 E-value=0.54 Score=41.33 Aligned_cols=19 Identities=26% Similarity=0.349 Sum_probs=16.7
Q ss_pred cEEEeCCCCceEEeeeCCC
Q 017102 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vvID~Gs~~~k~G~~~~~ 27 (377)
.++||+|.+++|+|+..++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 6999999999999988653
No 44
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=91.65 E-value=0.87 Score=40.08 Aligned_cols=19 Identities=21% Similarity=0.198 Sum_probs=16.1
Q ss_pred cEEEeCCCCceEEeeeCCC
Q 017102 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vvID~Gs~~~k~G~~~~~ 27 (377)
-++||+|.+++|+|+..++
T Consensus 2 lL~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECcCcEEEEEEECC
Confidence 3789999999999988543
No 45
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=90.91 E-value=0.27 Score=44.46 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=49.1
Q ss_pred HHHHHHhhhcccCCCCeEEeec---hhhhhhh------hcCCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHH
Q 017102 117 NREKMTQIMFETFNAPAMYVAI---QAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187 (377)
Q Consensus 117 ~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~------~~g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l 187 (377)
.+..+++.+-+.+|++ |.++. ++.++.+ .....+++|+|||+++|.++-+.++.+. ...++|+|.-.+
T Consensus 90 N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl 166 (315)
T 3mdq_A 90 NKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQRL 166 (315)
T ss_dssp THHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHHH
T ss_pred CHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhHH
Confidence 4455666665667776 33333 3322222 2223579999999999999999999887 677899998777
Q ss_pred HHHH
Q 017102 188 TDAL 191 (377)
Q Consensus 188 ~~~l 191 (377)
++.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 6654
No 46
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=90.39 E-value=1 Score=39.12 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=16.4
Q ss_pred cEEEeCCCCceEEeeeCCC
Q 017102 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vvID~Gs~~~k~G~~~~~ 27 (377)
-++||+|.+++|+|+..++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 5889999999999988644
No 47
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=86.55 E-value=4.2 Score=35.94 Aligned_cols=69 Identities=14% Similarity=0.069 Sum_probs=46.4
Q ss_pred cEEEEeCCCCCHHHHHHHHhhhcccCCC-CeEEeechhhhhhhh-cCCceEEEEeCCCCceEEEEeeCCeec
Q 017102 104 PILLTEAPLNPKANREKMTQIMFETFNA-PAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 104 ~vvl~~p~~~~~~~~~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~~~lVVDiG~~~t~v~pv~~g~~l 173 (377)
.+-+..|-.. ......+.+.+-+.+++ ..|.+.++.-+++++ .+..+++++=+|.+..-...+.||+..
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 4666677654 22223444455445665 368999999999997 567788888888776555556788775
No 48
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=86.25 E-value=2.5 Score=39.99 Aligned_cols=88 Identities=11% Similarity=0.086 Sum_probs=46.0
Q ss_pred HHHHHHHHhccccccc-CCCCCcEEEEeCCCCC------HHHHHHHHhhhcccC---CC--CeEEeechhh-------hh
Q 017102 83 DMEKIWHHTFYNELRV-APEEHPILLTEAPLNP------KANREKMTQIMFETF---NA--PAMYVAIQAV-------LS 143 (377)
Q Consensus 83 ~~~~~~~~~~~~~L~~-~~~~~~vvl~~p~~~~------~~~~~~l~~~lfe~~---~~--~~v~~~~~~~-------~a 143 (377)
.++.+++.+. +.... ..+..||.+.-..-+- ...++.+++.+-+.+ +| ..|.+++..- ++
T Consensus 90 ~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~v 168 (452)
T 3zx3_A 90 YLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITI 168 (452)
T ss_dssp HHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHH
Confidence 4555555543 22111 1245677766443221 113344444443333 33 4677766332 23
Q ss_pred hhhcCC------ceEEEEeCCCCceEEEEeeCCe
Q 017102 144 LYASGR------TTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 144 ~~~~g~------~~~lVVDiG~~~t~v~pv~~g~ 171 (377)
.|..|. .+..++|+|+++|.|+=..++.
T Consensus 169 nyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 169 NYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 334442 5677899999999999665553
No 49
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=77.52 E-value=19 Score=31.69 Aligned_cols=89 Identities=15% Similarity=0.199 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhcccccccCCCC---CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhc-CCceEEEEe
Q 017102 81 WDDMEKIWHHTFYNELRVAPEE---HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS-GRTTGIVLD 156 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~~~lVVD 156 (377)
++.+.+.++.++ +..+....+ ..+-+..|-.........+ +..|.. +. .|.+.++.-+++++. +..++++|-
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~l-~~~~~~-~~-pv~v~NDa~aaa~ge~~~~~~v~v~ 128 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGEF-ESQAPG-FA-RLSLATDGYTTLLGAHGGQPGIIVA 128 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHHH-HHTCCC-CS-EEEEECHHHHHHHHHTTTSSEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHHH-HHhCCC-Cc-eEEEECCHHHHHHhhcCCCCeEEEE
Confidence 345555555554 233333333 2366777765443322222 222221 33 488999999998874 567888888
Q ss_pred CCCCceEEEEeeCCeec
Q 017102 157 SGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 157 iG~~~t~v~pv~~g~~l 173 (377)
+|.+..-...+.+|...
T Consensus 129 ~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 129 LGTGSIGEALYPDGSHR 145 (305)
T ss_dssp ESSSEEEEEECTTSCEE
T ss_pred ecCCeEEEEEeCCCcEE
Confidence 88876433333488654
No 50
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=75.52 E-value=16 Score=32.11 Aligned_cols=55 Identities=22% Similarity=0.323 Sum_probs=36.8
Q ss_pred cEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhc-CCceEEEEeCCCC
Q 017102 104 PILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS-GRTTGIVLDSGDG 160 (377)
Q Consensus 104 ~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~~~lVVDiG~~ 160 (377)
.+-+..|-..+......+.+.+-+ ++. .|.+.++.-+++++. ...+.++|-+|.+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~-pv~v~ND~~aaa~~e~~~~~~v~l~~GTG 117 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAP-KVIIQHDGVIALFAETLGEPGVVVIAGTG 117 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSS-EEEEEEHHHHHHHHHHTTSCEEEEEESSS
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCC-CEEEeCcHHHHHhhccCCCCeEEEEecCC
Confidence 567777766433333445555534 665 477888988888765 3578889999988
No 51
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=70.60 E-value=14 Score=32.15 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=35.9
Q ss_pred CeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102 298 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+-|.+++++.+...... ..+++..+.....+...||+.++
T Consensus 236 ~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 236 CVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp EEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 5889999887788999999998875321 24455444444567788988765
No 52
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=70.52 E-value=4.9 Score=36.34 Aligned_cols=46 Identities=20% Similarity=0.207 Sum_probs=34.8
Q ss_pred ccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102 127 ETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|++..
T Consensus 129 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~ 181 (343)
T 2yhw_A 129 DTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIH 181 (343)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEec
Confidence 345777 78899998887752 3568999999986 6677788988764
No 53
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=67.51 E-value=11 Score=33.71 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=35.1
Q ss_pred ccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102 127 ETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|.+..
T Consensus 118 ~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 170 (327)
T 2ap1_A 118 ARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPIT 170 (327)
T ss_dssp HHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 446777 88999999988752 3568899999976 6677788998764
No 54
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=67.50 E-value=3.3 Score=37.89 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=25.7
Q ss_pred ceEEEEeCCCCceEEEEeeC--CeecCCceEEEcccH
Q 017102 150 TTGIVLDSGDGVSHTVPIYE--GYALPHAILRLDLAG 184 (377)
Q Consensus 150 ~~~lVVDiG~~~t~v~pv~~--g~~l~~~~~~~~~GG 184 (377)
.+.+|+|+|+++|.++-... +.+......++++||
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~ 176 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYG 176 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETT
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECC
Confidence 46999999999999997644 334333346778887
No 55
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=65.95 E-value=30 Score=30.96 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhcccccccCCC--CCcEEEEeCCCCCHHHHHHHHhhhcccCC--CCeEEeechhhhhhhhcCCceEEEEe
Q 017102 81 WDDMEKIWHHTFYNELRVAPE--EHPILLTEAPLNPKANREKMTQIMFETFN--APAMYVAIQAVLSLYASGRTTGIVLD 156 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~--~~~vvl~~p~~~~~~~~~~l~~~lfe~~~--~~~v~~~~~~~~a~~~~g~~~~lVVD 156 (377)
++.+...++.++ +..+.... -..+-+..|-.........+.+.+-+.++ ...|.+.++.-+++++....++++|-
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~~~~~~v~v~ 127 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 127 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhhCCCCcEEEE
Confidence 345555555554 22222222 23567778876665544455555545565 23478899999888875446778888
Q ss_pred CCCCceEEEEeeCCee
Q 017102 157 SGDGVSHTVPIYEGYA 172 (377)
Q Consensus 157 iG~~~t~v~pv~~g~~ 172 (377)
+|.+.-......+|..
T Consensus 128 ~GTGig~~~v~~~G~~ 143 (347)
T 2ch5_A 128 SGTGSNCRLINPDGSE 143 (347)
T ss_dssp ESSSEEEEEECTTSCE
T ss_pred EcCCceeEEEcCCCCE
Confidence 8876544332235643
No 56
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=65.18 E-value=17 Score=31.71 Aligned_cols=17 Identities=24% Similarity=0.225 Sum_probs=15.3
Q ss_pred cEEEeCCCCceEEeeeC
Q 017102 9 PLVCDNGTGMVKAGFAG 25 (377)
Q Consensus 9 ~vvID~Gs~~~k~G~~~ 25 (377)
-++||+|.+++|+|+..
T Consensus 25 ~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEEe
Confidence 49999999999999875
No 57
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=60.52 E-value=61 Score=29.51 Aligned_cols=133 Identities=12% Similarity=0.068 Sum_probs=0.0
Q ss_pred CCCCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCccee-eccccCCccC
Q 017102 1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVS 79 (377)
Q Consensus 1 ~~~~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~-~~p~~~g~i~ 79 (377)
|+..+..-.+.||+|.++++++... +.-... .. +.|....
T Consensus 3 ~~n~d~~~~lgiDIGgt~i~~~l~d-~G~il~-----------------------------------~~~~~~~~~~--- 43 (366)
T 3mcp_A 3 MYTNDNRIVMTLDAGGTNFVFSAIQ-GGKEIA-----------------------------------DPVVLPACAD--- 43 (366)
T ss_dssp TTTTCCCEEEEEECSSSEEEEEEEE-TTEECS-----------------------------------CCEEEECCTT---
T ss_pred cCCCCCCEEEEEEECcceEEEEEEE-CCEEEE-----------------------------------EEEEEECCCC---
Q ss_pred CHHHHHHHHHH---hcccccccCCCCCcEEEEeCCCCCH------------HHH--HHHHhhhcccCCCCeEEeechhhh
Q 017102 80 NWDDMEKIWHH---TFYNELRVAPEEHPILLTEAPLNPK------------ANR--EKMTQIMFETFNAPAMYVAIQAVL 142 (377)
Q Consensus 80 ~~~~~~~~~~~---~~~~~L~~~~~~~~vvl~~p~~~~~------------~~~--~~l~~~lfe~~~~~~v~~~~~~~~ 142 (377)
+.+.+.+.+.. .+.+.+. ..-..+-+..|-.... ..+ -.+.+.+-+.+++| |.+.++.-|
T Consensus 44 ~~~~~l~~i~~~~~~i~~~~~--~~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~P-V~veNDana 120 (366)
T 3mcp_A 44 CLDKCLGNLVEGFKAIQAGLP--EAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIP-VFINNDGSL 120 (366)
T ss_dssp CHHHHHHHHHHHHHHHHTTCS--SCCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSC-EEEECHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhh--cCCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCC-EEEechhhH
Q ss_pred hhhh--------------------cCCceEEEEeCCCCceEEEEeeCCeecCCc
Q 017102 143 SLYA--------------------SGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176 (377)
Q Consensus 143 a~~~--------------------~g~~~~lVVDiG~~~t~v~pv~~g~~l~~~ 176 (377)
++++ .+..+.++|-+|.+ .-...|.||.++...
T Consensus 121 aAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~givi~G~l~~G~ 173 (366)
T 3mcp_A 121 FAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVVIDGELLRGD 173 (366)
T ss_dssp HHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEEETTEECCCT
T ss_pred HHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEEECCEEecCC
No 58
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=59.08 E-value=7.1 Score=34.39 Aligned_cols=54 Identities=9% Similarity=0.083 Sum_probs=37.5
Q ss_pred HHHhhhcccCCC-CeEEeechhhhhhhhc-CCceEEEEeCCCCceEEEEeeCCeec
Q 017102 120 KMTQIMFETFNA-PAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 120 ~l~~~lfe~~~~-~~v~~~~~~~~a~~~~-g~~~~lVVDiG~~~t~v~pv~~g~~l 173 (377)
.+.+.+-+.++. ..|.+.++.-+++++. +..++++|=+|.+..-..-+.+|+..
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEE
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEE
Confidence 344444345664 3488999999999864 67788888888876445566788775
No 59
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=53.85 E-value=5.9 Score=34.76 Aligned_cols=48 Identities=13% Similarity=0.027 Sum_probs=36.0
Q ss_pred hhcccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102 124 IMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 124 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
.+-+.+++| |.+.++.-+++++. +. +.++|.+|.+ +-...|.+|++..
T Consensus 91 ~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~ 145 (289)
T 2aa4_A 91 TLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLT 145 (289)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEee
Confidence 333456777 78999999887753 24 8999999987 6777788998774
No 60
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=46.20 E-value=51 Score=30.00 Aligned_cols=46 Identities=15% Similarity=0.154 Sum_probs=34.9
Q ss_pred ccCCCCeEEeechhhhhhhhc---C--CceEEEEeCCCCceEEEEeeCCeecC
Q 017102 127 ETFNAPAMYVAIQAVLSLYAS---G--RTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~---g--~~~~lVVDiG~~~t~v~pv~~g~~l~ 174 (377)
+.+++| |.+.++.-+++++. | ..+.++|-+|.+ +-...|.+|.+..
T Consensus 186 ~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~ 236 (380)
T 2hoe_A 186 EKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYR 236 (380)
T ss_dssp HHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECC
T ss_pred HHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEec
Confidence 446776 88999999887753 3 378999999986 5677788998764
No 61
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=42.97 E-value=13 Score=34.01 Aligned_cols=53 Identities=11% Similarity=0.135 Sum_probs=34.8
Q ss_pred CeEEecCCCCC-CChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102 298 NIVLSGGSTMF-PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i-~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+.. +-|.+++++.+.........+++..+.....+...||+.++.
T Consensus 317 ~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 317 KIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp EEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred EEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 58888888764 667788888887765422234554443334567889887763
No 62
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=41.20 E-value=19 Score=31.83 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=37.0
Q ss_pred hhcccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecCC
Q 017102 124 IMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 124 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~~ 175 (377)
.+-+.+++| |.+.++.-|++++- +..+.+.|-+|.+ +-...|.||+++..
T Consensus 92 ~l~~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 148 (302)
T 3epq_A 92 TVXNEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIVEGRLLQG 148 (302)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCS
T ss_pred HHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEccc
Confidence 333556888 88999998887642 3578899999865 66677889988754
No 63
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=40.74 E-value=27 Score=33.01 Aligned_cols=51 Identities=12% Similarity=0.189 Sum_probs=40.3
Q ss_pred CeEEecCCCCCCChHHHHHHHHhhhCCC------CceEEEECCCCCccccchhhHHhhcc
Q 017102 298 NIVLSGGSTMFPGIADRMSKEISALAPS------SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~el~~~~~~------~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|.+-||....|+|.+++++.+..+++. ..+|.+.... -.+=.||+++|..
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~---dgsg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAI---DGXGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECC---CTTTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECC---CchhhhHHHHHHH
Confidence 4788888888899999999999988754 3467776654 5588899998876
No 64
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=40.28 E-value=48 Score=28.73 Aligned_cols=49 Identities=12% Similarity=-0.054 Sum_probs=34.6
Q ss_pred EEEEeCCCCceEEEEeeCCeecCCceEEE-cccHHHHHHHHHHHHHhcCC
Q 017102 152 GIVLDSGDGVSHTVPIYEGYALPHAILRL-DLAGRDLTDALMKILTERGY 200 (377)
Q Consensus 152 ~lVVDiG~~~t~v~pv~~g~~l~~~~~~~-~~GG~~l~~~l~~~l~~~~~ 200 (377)
-|+||+|.+.+....+.++..+....... ....+.+...+.+++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 48999999999999888877664333222 24567777777888776553
No 65
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=35.89 E-value=30 Score=30.60 Aligned_cols=61 Identities=16% Similarity=0.278 Sum_probs=38.4
Q ss_pred CeEEecCCCCCCC-hHHHHHHHHhhhCCC---CceEEEECCCCCccccchhhHHhhccccccccc
Q 017102 298 NIVLSGGSTMFPG-IADRMSKEISALAPS---SMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 358 (377)
Q Consensus 298 nIvl~GG~s~i~g-~~~rl~~el~~~~~~---~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~ 358 (377)
.|||-||.+..+. +.++|.+.+++.+.. ...+++..+.-...+.-.||+.++.-..|.+-|
T Consensus 242 ~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~ 306 (310)
T 3htv_A 242 AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFC 306 (310)
T ss_dssp EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC---
T ss_pred EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcccc
Confidence 5888888887754 467788777765521 124556555445677889999887554454433
No 66
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=33.19 E-value=26 Score=31.55 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=23.6
Q ss_pred hcCeEEecCCCCCCChHHHHHHHHhhh
Q 017102 296 YGNIVLSGGSTMFPGIADRMSKEISAL 322 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~el~~~ 322 (377)
.++|+++||.+.-..+.++|.+++...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999999988653
No 67
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=32.46 E-value=20 Score=32.28 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=27.4
Q ss_pred hcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCC
Q 017102 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP 335 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~ 335 (377)
.++|+++||.+.-..+.++|.+.+... .++++.++
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~-----g~~v~~p~ 279 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR-----GIKFFVPP 279 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH-----TCEEECCC
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc-----CCEEEecC
Confidence 468999999999999999999888643 23555554
No 68
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=30.99 E-value=34 Score=31.40 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=35.8
Q ss_pred cCeEEecCCCCCCC-hHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 297 GNIVLSGGSTMFPG-IADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g-~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|||+||.+...- |.+++++.+.... ++.+........+.-.||+.++.-
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcC
Confidence 46999999987765 8899999887764 345554433334677888877643
No 69
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=30.19 E-value=29 Score=32.93 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=31.3
Q ss_pred hcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++||.|+-+-+.+.+..-+ +.+|.+. +....++-.||+++|..
T Consensus 387 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~--~~~e~~~alGAA~lA~~ 434 (484)
T 2itm_A 387 PQSVTLIGGGARSEYWRQMLADIS------GQQLDYR--TGGDVGPALGAARLAQI 434 (484)
T ss_dssp CSCEEEESGGGCCHHHHHHHHHHH------CCCEEEE--SCTTSCHHHHHHHHHHH
T ss_pred cceEEEEeccccCHHHHHHHHHHh------CCeEEeC--CCCCcccHHHHHHHHHH
Confidence 367999999999876655555444 2244443 33334467899998865
No 70
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=29.85 E-value=21 Score=28.31 Aligned_cols=67 Identities=9% Similarity=0.023 Sum_probs=45.2
Q ss_pred CCCCeEEeechhhhhhhhcCCceEEEEeCCCCceEEEEeeCCee-cCCceEEEcccHHHHHHHHHHHHHhc
Q 017102 129 FNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDALMKILTER 198 (377)
Q Consensus 129 ~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~pv~~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~~ 198 (377)
+.+..+.+-++.+.++--....+-|.+|+---.|..+||..|.- ..+......+ +++..+.++|+..
T Consensus 22 ihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V---~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 22 IHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLV---HVNDLFLQYIQKN 89 (156)
T ss_dssp EEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEE---CCSHHHHHHHHHC
T ss_pred EEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEE---EeCHHHHHHHhcC
Confidence 44556666566555444456688999999999999999999844 3333334444 5566777777654
No 71
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=29.63 E-value=38 Score=32.00 Aligned_cols=22 Identities=14% Similarity=-0.071 Sum_probs=18.4
Q ss_pred ceEEEEeCCCCceEEEEeeCCe
Q 017102 150 TTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 150 ~~~lVVDiG~~~t~v~pv~~g~ 171 (377)
.+..|+|+|+++|.|+-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4679999999999999776654
No 72
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=28.79 E-value=16 Score=33.37 Aligned_cols=23 Identities=13% Similarity=0.432 Sum_probs=20.4
Q ss_pred cCeEEecCCCCCCChHHHHHHHH
Q 017102 297 GNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~el 319 (377)
..|++|||++.-|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 56999999999999999988766
No 73
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=27.97 E-value=40 Score=31.75 Aligned_cols=50 Identities=16% Similarity=0.310 Sum_probs=36.0
Q ss_pred eEEecCC-CCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 299 IVLSGGS-TMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 299 Ivl~GG~-s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
|.+-||. ..-|.|.+++++.+..++....++.+... ..++..||+++|..
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~---~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLS---EDGSGKGAAAIAAS 446 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEEC---TTHHHHHHHHHHTT
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEEC---CCccHHHHHHHHHH
Confidence 3444554 26799999999999887644456666633 56789999998865
No 74
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=27.01 E-value=18 Score=33.09 Aligned_cols=23 Identities=17% Similarity=0.518 Sum_probs=20.1
Q ss_pred cCeEEecCCCCCCChHHHHHHHH
Q 017102 297 GNIVLSGGSTMFPGIADRMSKEI 319 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~el 319 (377)
..|++|||++.-|-|.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999988765
No 75
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=25.30 E-value=17 Score=32.38 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=30.1
Q ss_pred CeEEecCCCCCCChHHHHHHHHhhhCC-CCceEEEECCCCCccccchhhHHhh
Q 017102 298 NIVLSGGSTMFPGIADRMSKEISALAP-SSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~g~~~rl~~el~~~~~-~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+.+-..+++.+..... ....+++..+.....+...||+.++
T Consensus 272 ~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 272 LLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp EEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred EEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 588888887765444445555554432 1123455444334466778988765
No 76
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=25.29 E-value=61 Score=30.79 Aligned_cols=47 Identities=17% Similarity=0.168 Sum_probs=31.7
Q ss_pred hcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||.|+-+-+.+.+..-+ +.+|.+.... -++-.||+++|..
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~~~~---e~~alGaA~lA~~ 440 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADIL------NRKVIRPVVK---ETTALGAAYLAGL 440 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhc------CCeEEEcCCC---cchHHHHHHHHHH
Confidence 467999999998876665555444 2255554432 3678899998864
No 77
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=24.92 E-value=23 Score=30.99 Aligned_cols=46 Identities=24% Similarity=0.079 Sum_probs=29.4
Q ss_pred cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102 297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
+.|+|.||.+..+-|.+++++.+... .+... . ...++-.||+.++.
T Consensus 241 ~~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~--~-~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 241 NKVYLKGGMFRSNIYHKFFTLYLEKE-----GIISD--L-GKRSPEIGAVILAY 286 (299)
T ss_dssp SEEEEESGGGGSHHHHHHHHHHHHHT-----TCEEE--C-CSCCHHHHHHHHHH
T ss_pred CEEEEECCccCcHHHHHHHHHHCCCC-----eEecc--C-CCCChHHHHHHHHH
Confidence 35888888876666667777666553 23332 2 34667889988764
No 78
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=24.24 E-value=29 Score=36.05 Aligned_cols=51 Identities=14% Similarity=0.300 Sum_probs=39.2
Q ss_pred cCeEEecCCCCC-CChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 297 GNIVLSGGSTMF-PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i-~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
..|++-||.+.. |.|.+++++.+.++.+. .++++... +-+.-.||+++|..
T Consensus 408 ~~IvigGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 408 TTVGVDGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLLS---ESGSGKGAAMVTAV 459 (917)
T ss_dssp EEEEEECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEEC---TTCHHHHHHHHHHH
T ss_pred eEEEECCchhhccHHHHHHHHHHHHHhcCC-CceEEEEe---ccchHHHHHHHHHh
Confidence 346777777666 99999999999988754 46777665 46688999998865
No 79
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=24.08 E-value=25 Score=35.69 Aligned_cols=27 Identities=30% Similarity=0.314 Sum_probs=22.8
Q ss_pred hcCeEEecCCCCCCChHHHHHHHHhhh
Q 017102 296 YGNIVLSGGSTMFPGIADRMSKEISAL 322 (377)
Q Consensus 296 ~~nIvl~GG~s~i~g~~~rl~~el~~~ 322 (377)
.+||+|+||.+.-.-+.++|.+.|...
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L~~~ 732 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVVEAN 732 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHGGGS
T ss_pred cCEEEEEchHHHHHHHHHHHHHHHHHC
Confidence 478999999999988888888887653
No 80
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=23.52 E-value=1.2e+02 Score=26.57 Aligned_cols=46 Identities=17% Similarity=0.140 Sum_probs=32.2
Q ss_pred eEEEEeCCCCceEEEEe-eCCeecCCceEEEcccHHHHHHHHHHHHH
Q 017102 151 TGIVLDSGDGVSHTVPI-YEGYALPHAILRLDLAGRDLTDALMKILT 196 (377)
Q Consensus 151 ~~lVVDiG~~~t~v~pv-~~g~~l~~~~~~~~~GG~~l~~~l~~~l~ 196 (377)
..+.||+|.+.+.++.+ .+|.++.......+.+...+.+.+.+.+.
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~~~~~~~~~~~i~~~i~ 49 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEEGRILSTFKVATPPTAEGIVDAICAAVA 49 (321)
T ss_dssp EEEEEEECSSEEEEEEECTTCCBCCCEEEECCSSHHHHHHHHHHHHH
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEeeCCCCHHHHHHHHHHHHH
Confidence 46889999999999887 46777755444445566666666665554
No 81
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=22.73 E-value=1.5e+02 Score=25.48 Aligned_cols=48 Identities=21% Similarity=0.209 Sum_probs=31.9
Q ss_pred EEEeCCCCceEEEEeeCCeecCCceEEEc--ccHHHHHHHHHHHHHhcCC
Q 017102 153 IVLDSGDGVSHTVPIYEGYALPHAILRLD--LAGRDLTDALMKILTERGY 200 (377)
Q Consensus 153 lVVDiG~~~t~v~pv~~g~~l~~~~~~~~--~GG~~l~~~l~~~l~~~~~ 200 (377)
|+||+|.+.+....+.++..+.......+ .-.+.+...+.+++...+.
T Consensus 3 L~IDIGNT~ik~gl~~~~~l~~~~r~~T~~~~t~de~~~~l~~ll~~~~~ 52 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEGELRQHWRMETDRHKTEDEYGMLVKQLLEHEGL 52 (268)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC
T ss_pred EEEEECcCcEEEEEEECCEEEEEEEecCCCcCCHHHHHHHHHHHHHHcCC
Confidence 78999999999988877766543322222 2355666677777765543
No 82
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=22.52 E-value=48 Score=31.49 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=31.9
Q ss_pred cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+..-+. .+|.+.... -++-.||+++|..
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~g------~pV~~~~~~---e~~alGaA~la~~ 445 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLLG------VPVAVPEVT---ETTALGAALMAGV 445 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCS---CHHHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHhC------CeeEecCCc---ccHHHHHHHHHHh
Confidence 579999999998866665555542 255554433 3678899998865
No 83
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=22.07 E-value=43 Score=31.09 Aligned_cols=27 Identities=26% Similarity=0.186 Sum_probs=19.7
Q ss_pred CCCCCCCCcEEEeCCCCceEEeeeCCC
Q 017102 1 MADTEDIQPLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 1 ~~~~~~~~~vvID~Gs~~~k~G~~~~~ 27 (377)
|.+....+.+||..||+++|+++...+
T Consensus 12 ~~~~~~~~ILviN~GSSS~K~~lf~~~ 38 (415)
T 2e1z_A 12 MASNEFPVVLVINCGSSSIKFSVLDVA 38 (415)
T ss_dssp -----CCEEEEEEECSSEEEEEEEETT
T ss_pred cccCCCCeEEEEECCchhheEEEEECC
Confidence 677778889999999999999988653
No 84
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=21.01 E-value=49 Score=29.48 Aligned_cols=50 Identities=14% Similarity=0.128 Sum_probs=31.4
Q ss_pred CeEEecCCCCC-CChHHHHHHHHhhhC--CC---CceEEEECCCCCccccchhhHHhhc
Q 017102 298 NIVLSGGSTMF-PGIADRMSKEISALA--PS---SMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i-~g~~~rl~~el~~~~--~~---~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+.. +-|.+.+++.+.... +. ..++.+... .. +...||+.++.
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--~~-a~~~GAa~la~ 323 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--RH-SSALGGASLGA 323 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--SS-CTHHHHHHHHH
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--CC-ChHHHHHHHHH
Confidence 58888887743 667788888887663 21 223444332 24 77889988763
No 85
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=20.79 E-value=85 Score=29.84 Aligned_cols=46 Identities=26% Similarity=0.208 Sum_probs=31.6
Q ss_pred cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102 297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+..-+ ..+|.+.... -++-.||+++|..
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~------g~pV~~~~~~---e~~alGaA~la~~ 454 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDII------NTKIEVSKYK---EVTSLGAAVLAGL 454 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHH------TSCEEEESCS---CHHHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHH------CCeEEecCCC---cchHHHHHHHHHH
Confidence 67999999999876665555444 2255554433 3678899998865
No 86
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=20.37 E-value=23 Score=32.29 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=32.4
Q ss_pred cCCCCeEEeechhhhhhhh----------------c--------------C----CceEEEEeCCCCceEEEEeeCCeec
Q 017102 128 TFNAPAMYVAIQAVLSLYA----------------S--------------G----RTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 128 ~~~~~~v~~~~~~~~a~~~----------------~--------------g----~~~~lVVDiG~~~t~v~pv~~g~~l 173 (377)
.+++..|.+.++.-+++++ . | ..+.++|-+|.+ +-...|.+|.+.
T Consensus 126 ~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTG-iG~gii~~g~l~ 204 (373)
T 2q2r_A 126 LFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTG-LGSSLIYYNPPM 204 (373)
T ss_dssp TSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSS-EEEEEEEECC--
T ss_pred hcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCc-eeEEEEecCccc
Confidence 3777458899999998888 2 3 267899999877 456667788665
Q ss_pred C
Q 017102 174 P 174 (377)
Q Consensus 174 ~ 174 (377)
.
T Consensus 205 ~ 205 (373)
T 2q2r_A 205 N 205 (373)
T ss_dssp -
T ss_pred C
Confidence 4
Done!