BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017108
(377 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 94/129 (72%), Gaps = 5/129 (3%)
Query: 250 DALSSHTSPASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYH 309
D LS S +S K RMRWTPELHE FVEAVN+L G E+ATPKAVLKL+N GLTIYH
Sbjct: 216 DQLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGLTIYH 275
Query: 310 VKSHLQKYRLAKYMPEKKEEKKTCSSEEKKATS--SIESDGRKKGSIQFTEALRMQMEVQ 367
VKSHLQKYR A+Y PE E T +EKK TS I+S K S++ T+ALR+QMEVQ
Sbjct: 276 VKSHLQKYRTARYKPETSE--VTGEPQEKKMTSIEDIKSLDMKT-SVEITQALRLQMEVQ 332
Query: 368 KQLHEQLEV 376
K+LHEQLE+
Sbjct: 333 KRLHEQLEI 341
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLAKYMP 324
KPR+RWT ELHE FV+AV +L GP+KATPK ++++M V+GLT+YH+KSHLQK+RL K P
Sbjct: 34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGK-QP 92
Query: 325 EKKEEKKTCSSEEKKATSSIESDGRKKGSIQFTEALRMQMEVQKQLHEQLEV 376
K+ + + + I+ + + MQMEVQ++LHEQLEV
Sbjct: 93 HKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNEMQMEVQRRLHEQLEV 144
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 266 PRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR 318
PR+RWTPELH FV AV+ L G KATPK VLK+M+V+GLTI HVKSHLQ YR
Sbjct: 24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR 76
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 258 PASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKY 317
PA + PRMRWT LH FV AV L G E+ATPK+VL+LM+V+ LT+ HVKSHLQ Y
Sbjct: 206 PAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 265
Query: 318 RLAKYMPEKKEEKKTCSSEEKKATSSIESDGRKKGS 353
R T + +K A SS +SD + GS
Sbjct: 266 R-------------TVKTTDKAAASSGQSDVYENGS 288
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 54/91 (59%), Gaps = 13/91 (14%)
Query: 258 PASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKY 317
PA + PRMRWT LH FV AV L G E+ATPK+VL+LM+V+ LT+ HVKSHLQ Y
Sbjct: 317 PAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 376
Query: 318 RLAKYMPEKKEEKKTCSSEEKKATSSIESDG 348
R T S +K A SS +DG
Sbjct: 377 R-------------TVKSTDKPAASSGPADG 394
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 51/82 (62%), Gaps = 13/82 (15%)
Query: 266 PRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLAKYMPE 325
PRMRWT LH FV AV L G E+ATPK+VL+LM+V+ LT+ HVKSHLQ YR
Sbjct: 165 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR------- 217
Query: 326 KKEEKKTCSSEEKKATSSIESD 347
T S EK TSS +SD
Sbjct: 218 ------TIKSTEKPTTSSGQSD 233
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 42/56 (75%)
Query: 266 PRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLAK 321
PRMRWT LH FV AV L G E+ATPK+VL+LMNV+ LT+ HVKSHLQ YR K
Sbjct: 106 PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVK 161
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 44/64 (68%)
Query: 258 PASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKY 317
P + PRMRWT LH FV AV L G E+ATPK+VL+LM+V+ LT+ HVKSHLQ Y
Sbjct: 212 PTKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 271
Query: 318 RLAK 321
R K
Sbjct: 272 RTVK 275
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRL 319
KPR+ W+ ELH+ FV AVN+L G EKA PK +L+LMNV GLT +V SHLQKYR+
Sbjct: 237 KPRVVWSVELHQQFVAAVNQL-GVEKAVPKKILELMNVPGLTRENVASHLQKYRI 290
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 253 SSHTSPASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKS 312
S S T KPR+ W+ ELH+ FV AV +L G +KA PK +L LM++EGLT +V S
Sbjct: 182 SEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQL-GLDKAVPKKILDLMSIEGLTRENVAS 240
Query: 313 HLQKYRL-AKYMPEKKEEKKT 332
HLQKYRL K + E +++ T
Sbjct: 241 HLQKYRLYLKKIDEGQQQNMT 261
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 260 SATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRL 319
S++ KPR+ W+ ELH+ FV AVN+L G +KA PK +L++MNV GLT +V SHLQKYR+
Sbjct: 211 SSSLKKPRVVWSVELHQQFVAAVNQL-GVDKAVPKKILEMMNVPGLTRENVASHLQKYRI 269
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 48/77 (62%), Gaps = 12/77 (15%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLM----NVEGLTIYHVKSHLQKYRLA 320
KPRM+WTPELH F AV K+ EKA PK +LK M NV+GLT +V SHLQKYR
Sbjct: 211 KPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYR-- 268
Query: 321 KYMPEKKEEKKTCSSEE 337
+ KKTC+ +E
Sbjct: 269 ------QSSKKTCTPQE 279
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 55/92 (59%)
Query: 252 LSSHTSPASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVK 311
L + P+S+++ K R+ W+ ELH FV AVN++ KA PK +L LMNV LT +V
Sbjct: 180 LQDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVA 239
Query: 312 SHLQKYRLAKYMPEKKEEKKTCSSEEKKATSS 343
SHLQKYRL EK +E K S K A SS
Sbjct: 240 SHLQKYRLYLSRLEKGKELKCYSGGVKNADSS 271
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 260 SATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRL 319
S K R+ WT ELH+ FV AVN+L G EKA PK +L LMNVE LT +V SHLQK+RL
Sbjct: 190 SCAQKKQRVVWTVELHKKFVAAVNQL-GYEKAMPKKILDLMNVEKLTRENVASHLQKFRL 248
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 261 ATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLA 320
+ K R+ W+ ELH+ FV AVNKL G +KA PK +L+LMNV GL+ +V SHLQK+RL
Sbjct: 196 GNSKKSRVVWSIELHQQFVNAVNKL-GIDKAVPKRILELMNVPGLSRENVASHLQKFRL- 253
Query: 321 KYMPE-KKEEKKTCSSEEKKATSSIES 346
Y+ E ++ SE K +I++
Sbjct: 254 -YLKRLSGEASQSNDSESTKRYENIQA 279
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR 318
KP++ WTPELH FV+AV +L G +KA P +L++MNV+ LT ++V SHLQKYR
Sbjct: 147 KPKVDWTPELHRKFVQAVEQL-GVDKAVPSRILEIMNVKSLTRHNVASHLQKYR 199
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLA 320
KPR+ WT ELH F+ AV+ L G E+A PK +L LMNV+ LT +V SHLQK+R+A
Sbjct: 183 KPRVLWTHELHNKFLAAVDHL-GVERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Query: 264 HKPRMRWTPELHECFVEAVNKLDGPEKATPKAV---LKLMNVEGLTIYHVKSHLQKYRL 319
KPRM WT ELH+ F+EA+ + G EKA PK + L+ M +EG+T +V SHLQK+R+
Sbjct: 214 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRI 272
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR--LAKY 322
K R+ WT +LH F+ AVN L G +KA PK +L +M V+ LT V SHLQKYR L K
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHL-GEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKS 256
Query: 323 MPEKKEEKKTCSS 335
+P + T SS
Sbjct: 257 IPTTSKHGATLSS 269
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR--LAKY 322
K R+ WT +LH F+ AVN L G +KA PK +L +M V+ LT V SHLQKYR L K
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHL-GEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKS 256
Query: 323 MPEKKEEKKTCSS 335
+P + T SS
Sbjct: 257 IPTTSKHGATLSS 269
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR 318
K ++ WTPELH FV+AV +L G +KA P +L+LM +E LT +++ SHLQKYR
Sbjct: 215 KVKVDWTPELHRRFVQAVEQL-GIDKAVPSRILELMGIECLTRHNIASHLQKYR 267
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR 318
K ++ WTPELH FVEAV +L G +KA P +L+LM V LT ++V SHLQKYR
Sbjct: 153 KVKVDWTPELHRRFVEAVEQL-GVDKAVPSRILELMGVHCLTRHNVASHLQKYR 205
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 270 WTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRL-AKYMPEKKE 328
WTPELH FV+AV +L G +KA P +L++M ++ LT +++ SHLQKYR K+M ++
Sbjct: 185 WTPELHRRFVQAVEQL-GIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIAREA 243
Query: 329 EKKTCSSEEK 338
E + + +
Sbjct: 244 EAASWTQRRQ 253
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 248 PVDALSSHTSPASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTI 307
P++ S + + + ++ WTPELH+ FV+AV +L G ++A P +L+LM V LT
Sbjct: 279 PINKSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQL-GVDQAIPSRILELMKVGTLTR 337
Query: 308 YHVKSHLQKYR 318
++V SHLQK+R
Sbjct: 338 HNVASHLQKFR 348
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 260 SATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRL 319
S A K +++WT LH+ F++A+ + G +KA PK +L M+V LT +V SHLQKYR+
Sbjct: 217 SQPAKKKKIQWTDSLHDLFLQAIRHI-GLDKAVPKKILAFMSVPYLTRENVASHLQKYRI 275
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRL 319
K ++ WT L + F++A+ + G +K PK +L +MNV LT +V SHLQKYRL
Sbjct: 225 KKKIWWTNPLQDLFLQAIQHI-GYDKVVPKKILAIMNVPYLTRENVASHLQKYRL 278
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 254 SHTSPASAT-AHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKS 312
H A A+ A K R+ W ELH+ F+ AV+ L G E+A PK +L +M V+ ++ +V S
Sbjct: 211 DHNDRACASSAKKRRVVWDEELHQNFLNAVDFL-GLERAVPKKILDVMKVDYISRENVAS 269
Query: 313 HLQ 315
HLQ
Sbjct: 270 HLQ 272
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 270 WTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR 318
W E H F+ A++ L G E PK++L++MN LT V SHLQKY+
Sbjct: 227 WNSERHMKFIAAISIL-GEEDFRPKSILEIMNDPNLTHRQVGSHLQKYK 274
>sp|Q12RY2|MURA_SHEDO UDP-N-acetylglucosamine 1-carboxyvinyltransferase OS=Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
GN=murA PE=3 SV=1
Length = 419
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 27/130 (20%)
Query: 204 DELDIDITDHGENPRLDEIYDAPKSSLKPPMGLSCKENYVSSAPPVDALSSHTSPASATA 263
D +++D+ HG+ P+ I AP + M + + ++AL+ T + T
Sbjct: 280 DWIELDM--HGKQPKAVNIKTAPYPAFPTDM----QAQFCV----LNALAQGTGRVTETI 329
Query: 264 HKPRMRWTPEL-----------HECFVEAVNKLDGPE------KATPKAVLKLMNVEGLT 306
+ R PEL H C ++ ++KL+G + +A+ V+ + EG T
Sbjct: 330 FENRFMHVPELIRMGANMELEGHTCIIQGIDKLNGAQVMATDLRASASLVIAGLMAEGTT 389
Query: 307 IYHVKSHLQK 316
+ HL +
Sbjct: 390 LVDRIYHLDR 399
>sp|Q6TH15|EIF3D_DANRE Eukaryotic translation initiation factor 3 subunit D OS=Danio rerio
GN=eif3d PE=2 SV=1
Length = 552
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 30 HNFQTECQSLSTGEYPFPHPSPFIRKES 57
HNF +C + Y FP+P+PF+ +++
Sbjct: 324 HNFSQQCLRMGGERYKFPNPNPFVEEDT 351
>sp|B4SDX5|PANC_PELPB Pantothenate synthetase OS=Pelodictyon phaeoclathratiforme (strain
DSM 5477 / BU-1) GN=panC PE=3 SV=1
Length = 283
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 129 HPRTFNQSVSAVDSTKSSLLFSEDMGNAYQEEHSESLMKGFLN--FPEDASDGSFPGVTC 186
+PR F Q V+ + + LF+ + G Y E H +L G L + G F GV
Sbjct: 71 YPRPFEQDVALATAAEVDYLFAPEAGTIYPENHQTTLQCGALGERLEGERRPGHFNGVAT 130
Query: 187 MGERL 191
+ +L
Sbjct: 131 IVTKL 135
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 257 SPASATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQK 316
+P + + R WT E FVEA D K + +V+ TI V+SH QK
Sbjct: 140 TPKTTISGATRSSWTKEEERLFVEAYKLYDKDNKKIQE------HVKTKTILQVRSHAQK 193
Query: 317 YRL 319
+ L
Sbjct: 194 FAL 196
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 262 TAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKY 317
T K R WT E H+ F+EA+ D K V T+ ++SH QKY
Sbjct: 36 TISKQRENWTDEEHQKFLEALTLFDRDWKKIESF------VGSKTVIQIRSHAQKY 85
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 270 WTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKY--RLAKYMPEKK 327
WTPE H F+EA++K + K++ + ++ T V++H QKY R+ + K
Sbjct: 175 WTPEEHSRFIEALSKYGHKDV---KSISQYVSTRNPT--QVRTHAQKYFLRIDRERGRKL 229
Query: 328 EEKKTCSSEEKKATSSIESDGRKKGS 353
E K++ + K + + +GS
Sbjct: 230 ESKESINGGADKDDDWLREEYNDEGS 255
>sp|Q91ZK4|DMBX1_MOUSE Diencephalon/mesencephalon homeobox protein 1 OS=Mus musculus
GN=Dmbx1 PE=1 SV=1
Length = 381
Score = 31.6 bits (70), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 100 SSVFCTSLYLSSSASSETHRQIGNFPFLPHPRTFNQSVSAVDSTKSS 146
SS+ C S Y S SA++ H+ + P LP P T SA ++K++
Sbjct: 312 SSLHCQSYYQSLSAAAAAHQGVWGSPLLPAPPTGLAPASAALNSKTT 358
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,567,382
Number of Sequences: 539616
Number of extensions: 5946924
Number of successful extensions: 15192
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 15088
Number of HSP's gapped (non-prelim): 98
length of query: 377
length of database: 191,569,459
effective HSP length: 119
effective length of query: 258
effective length of database: 127,355,155
effective search space: 32857629990
effective search space used: 32857629990
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)