Query 017108
Match_columns 377
No_of_seqs 182 out of 518
Neff 3.3
Searched_HMMs 46136
Date Fri Mar 29 05:40:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017108.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017108hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03162 golden-2 like transcr 99.9 5.9E-26 1.3E-30 225.3 8.6 70 260-330 230-299 (526)
2 TIGR01557 myb_SHAQKYF myb-like 99.8 1.2E-21 2.7E-26 149.0 6.3 56 265-320 1-56 (57)
3 PF14379 Myb_CC_LHEQLE: MYB-CC 99.0 1.3E-10 2.9E-15 87.8 2.4 24 353-376 1-24 (51)
4 PF00249 Myb_DNA-binding: Myb- 97.1 0.001 2.2E-08 47.9 5.0 48 267-318 1-48 (48)
5 smart00426 TEA TEA domain. 81.4 1.6 3.5E-05 35.4 3.1 17 269-285 5-21 (68)
6 smart00717 SANT SANT SWI3, AD 58.2 39 0.00085 22.4 5.4 43 268-316 2-45 (49)
7 PF01285 TEA: TEA/ATTS domain 52.8 16 0.00034 38.4 3.9 54 263-317 45-112 (431)
8 PF12776 Myb_DNA-bind_3: Myb/S 52.3 17 0.00036 28.8 3.2 51 269-319 1-63 (96)
9 KOG3101 Esterase D [General fu 51.0 9.5 0.00021 37.8 1.8 44 182-227 51-94 (283)
10 cd00167 SANT 'SWI3, ADA2, N-Co 48.5 66 0.0014 21.0 5.2 43 269-316 1-43 (45)
11 smart00501 BRIGHT BRIGHT, ARID 42.6 23 0.0005 28.6 2.6 46 272-318 32-84 (93)
12 TIGR02894 DNA_bind_RsfA transc 41.9 34 0.00074 32.0 3.8 53 260-320 41-95 (161)
13 PF07384 DUF1497: Protein of u 33.3 37 0.0008 26.7 2.3 22 268-289 36-57 (59)
14 PF14379 Myb_CC_LHEQLE: MYB-CC 33.1 33 0.00071 26.6 1.9 19 357-375 15-33 (51)
15 KOG3841 TEF-1 and related tran 23.7 51 0.0011 34.9 2.1 55 265-321 74-145 (455)
16 PHA02827 hypothetical protein; 21.4 95 0.0021 28.8 3.1 42 279-321 104-149 (150)
No 1
>PLN03162 golden-2 like transcription factor; Provisional
Probab=99.92 E-value=5.9e-26 Score=225.32 Aligned_cols=70 Identities=43% Similarity=0.655 Sum_probs=63.9
Q ss_pred CCCCCCCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCCCHHHHHHhhhhhhhcccCCcchhhh
Q 017108 260 SATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLAKYMPEKKEEK 330 (377)
Q Consensus 260 ~~~~~KpRlrWT~ELH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~k~~~~~~~~~ 330 (377)
....+|+||+||+|||+|||+||++|| .++||||+||++|+|+|||++||||||||||+.+++...++..
T Consensus 230 ~~g~KKpRLrWTpELH~rFVeAV~qLG-~dKATPK~ILelMnV~GLTRenVKSHLQKYRl~rk~l~~rEaE 299 (526)
T PLN03162 230 APGKKKAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRHLAAREAE 299 (526)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHhC-cCccchHHHHHHcCCCCcCHHHHHHHHHHHHHhcccccchhhh
Confidence 344889999999999999999999996 7999999999999999999999999999999998876666554
No 2
>TIGR01557 myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
Probab=99.85 E-value=1.2e-21 Score=149.04 Aligned_cols=56 Identities=61% Similarity=0.976 Sum_probs=54.3
Q ss_pred CCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCCCHHHHHHhhhhhhhc
Q 017108 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYRLA 320 (377)
Q Consensus 265 KpRlrWT~ELH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYRl~ 320 (377)
|+|++||+|+|++|++||+.||+.+.||||.|+++|++++||+.+|+|||||||+.
T Consensus 1 k~r~~WT~eeh~~Fl~ai~~~G~g~~a~pk~I~~~~~~~~lT~~qV~SH~QKy~~k 56 (57)
T TIGR01557 1 KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLK 56 (57)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcccchHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence 78999999999999999999998899999999999999999999999999999985
No 3
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=99.02 E-value=1.3e-10 Score=87.83 Aligned_cols=24 Identities=79% Similarity=1.059 Sum_probs=22.8
Q ss_pred CccHHHHHHHHHHHhhhhhhhhcc
Q 017108 353 SIQFTEALRMQMEVQKQLHEQLEV 376 (377)
Q Consensus 353 ~~qitEALrmQmEVQkrLhEQLEV 376 (377)
+++|+||||+||||||||||||||
T Consensus 1 g~~i~EALr~QmEvQrrLhEQLEv 24 (51)
T PF14379_consen 1 GMQITEALRMQMEVQRRLHEQLEV 24 (51)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999997
No 4
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=97.12 E-value=0.001 Score=47.88 Aligned_cols=48 Identities=33% Similarity=0.371 Sum_probs=41.2
Q ss_pred CcccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCCCHHHHHHhhhhhh
Q 017108 267 RMRWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQKYR 318 (377)
Q Consensus 267 RlrWT~ELH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQKYR 318 (377)
|..||+|=+++|++||.++|. . .-+.|-+.|+ .|-|..++++|.++|+
T Consensus 1 r~~Wt~eE~~~l~~~v~~~g~-~--~W~~Ia~~~~-~~Rt~~qc~~~~~~~~ 48 (48)
T PF00249_consen 1 RGPWTEEEDEKLLEAVKKYGK-D--NWKKIAKRMP-GGRTAKQCRSRYQNLL 48 (48)
T ss_dssp S-SS-HHHHHHHHHHHHHSTT-T--HHHHHHHHHS-SSSTHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCC-c--HHHHHHHHcC-CCCCHHHHHHHHHhhC
Confidence 578999999999999999963 2 5789999998 7899999999999985
No 5
>smart00426 TEA TEA domain.
Probab=81.40 E-value=1.6 Score=35.40 Aligned_cols=17 Identities=29% Similarity=0.790 Sum_probs=16.0
Q ss_pred ccCHHHHHHHHHHHHhh
Q 017108 269 RWTPELHECFVEAVNKL 285 (377)
Q Consensus 269 rWT~ELH~rFV~AV~qL 285 (377)
.|.++|-..|++|+...
T Consensus 5 vWp~~lE~Af~~aL~~~ 21 (68)
T smart00426 5 VWSPDIEQAFQEALAIY 21 (68)
T ss_pred cCcHHHHHHHHHHHHHc
Confidence 69999999999999887
No 6
>smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=58.24 E-value=39 Score=22.39 Aligned_cols=43 Identities=23% Similarity=0.321 Sum_probs=32.4
Q ss_pred cccCHHHHHHHHHHHHhhC-CCCCCchHHHHhhcCCCCCCHHHHHHhhhh
Q 017108 268 MRWTPELHECFVEAVNKLD-GPEKATPKAVLKLMNVEGLTIYHVKSHLQK 316 (377)
Q Consensus 268 lrWT~ELH~rFV~AV~qLG-G~~kAtPK~IL~lM~v~gLT~~hVkSHLQK 316 (377)
-.||++=...|+.+|.++| + .=+.|-+.|+ +=|...|+.+-.+
T Consensus 2 ~~Wt~~E~~~l~~~~~~~g~~----~w~~Ia~~~~--~rt~~~~~~~~~~ 45 (49)
T smart00717 2 GEWTEEEDELLIELVKKYGKN----NWEKIAKELP--GRTAEQCRERWNN 45 (49)
T ss_pred CCCCHHHHHHHHHHHHHHCcC----CHHHHHHHcC--CCCHHHHHHHHHH
Confidence 4699999999999999996 3 3456666665 6777777766443
No 7
>PF01285 TEA: TEA/ATTS domain family; InterPro: IPR000818 Transcriptional enhancer activators are nuclear proteins that contain a TEA/ATTSdomain, a DNA-binding region of 66-68 amino acids. The TEA/ATTS domain is found in the N-termini of certain gene regulatory proteins, such as the Simian virus 40 (SV40) enhancer factor TEF-1, yeast trans-acting factor TEC-1 (which is required for TY1 enhancer activity), and the Aspergillus abaA regulatory gene product. SV40 and retroviral enhancers, and those to which TEF-1, TEC-1 and abaA proteins bind, contain GT-IIC sites: the TEA/ATTS domain may therefore recognise and bind such sites. Secondary structure predictions suggest the presence of 3 helices, but have not confirmed the presence of the helix-turn-helix motif characteristic of many DNA-binding proteins: DNA-binding may therefore be effected by a different mechanism [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3L15_B 2HZD_A 3KYS_A 3JUA_C 4EAZ_B.
Probab=52.80 E-value=16 Score=38.36 Aligned_cols=54 Identities=20% Similarity=0.266 Sum_probs=28.7
Q ss_pred CCCCCcccCHHHHHHHHHHHHhhCCCCCCchHHHH-hhcC----------C---CCCCHHHHHHhhhhh
Q 017108 263 AHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVL-KLMN----------V---EGLTIYHVKSHLQKY 317 (377)
Q Consensus 263 ~~KpRlrWT~ELH~rFV~AV~qLGG~~kAtPK~IL-~lM~----------v---~gLT~~hVkSHLQKY 317 (377)
..+..-+|.+++...|++|+...=-..++. -.+. ++.| . +-=|+.+|.||+|..
T Consensus 45 ~~~~~~vw~~~~e~af~~al~~~~~~g~~k-~~~~~~~~grn~li~~yi~~~tg~~rt~kqvsshiqvl 112 (431)
T PF01285_consen 45 DGDGEGVWPPDIEQAFQEALAIYPPCGRRK-LSDEGKMYGRNELISDYIKLKTGKTRTRKQVSSHIQVL 112 (431)
T ss_dssp -GGGS--S-HHHHHHHHHHHHHS-SSS----HHHH-----THHHHHHHHHHHHS----SHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCCCcc-cccccccccchhHHHHHHHHHhCcccchhHHHHHHHHH
Confidence 467788999999999999998862111221 1111 1111 0 336788999999998
No 8
>PF12776 Myb_DNA-bind_3: Myb/SANT-like DNA-binding domain; InterPro: IPR024752 This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains.
Probab=52.32 E-value=17 Score=28.76 Aligned_cols=51 Identities=14% Similarity=0.253 Sum_probs=33.4
Q ss_pred ccCHHHHHHHHHHHHh---hCCC-CCCch-----HHHHhhcCC---CCCCHHHHHHhhhhhhh
Q 017108 269 RWTPELHECFVEAVNK---LDGP-EKATP-----KAVLKLMNV---EGLTIYHVKSHLQKYRL 319 (377)
Q Consensus 269 rWT~ELH~rFV~AV~q---LGG~-~kAtP-----K~IL~lM~v---~gLT~~hVkSHLQKYRl 319 (377)
+||++..+-||+++-. .|+- ..... +.|.+.|+- ..+|..+|++|+...|.
T Consensus 1 ~Wt~~~~~~ll~~~~e~~~~g~~~~~~~fk~~~w~~i~~~~~~~~~~~~t~~qlknk~~~lk~ 63 (96)
T PF12776_consen 1 SWTPEMTRFLLDLLIEQINKGNRPTNGGFKKEGWNNIAEEFNEKTGLNYTKKQLKNKWKTLKK 63 (96)
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCCCCcCHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Confidence 6999999999998843 3433 12222 234454442 45788999999876554
No 9
>KOG3101 consensus Esterase D [General function prediction only]
Probab=51.04 E-value=9.5 Score=37.83 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=39.3
Q ss_pred CCccccccccccccchhhhhhhhccccccccCCCCCCchhhccCCC
Q 017108 182 PGVTCMGERLGLNEHLELQFLSDELDIDITDHGENPRLDEIYDAPK 227 (377)
Q Consensus 182 ~~~~~~~~~~~~~eq~e~Qflsdql~i~ItD~~~~p~~d~i~~~p~ 227 (377)
-|++|+-++ |.++.-||+-++.++|+|+--+..||=.||-+.+.
T Consensus 51 SGLTCT~~N--fi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~e 94 (283)
T KOG3101|consen 51 SGLTCTHEN--FIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDE 94 (283)
T ss_pred cCCcccchh--hHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcc
Confidence 489998776 99999999999999999999999999988887763
No 10
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=48.53 E-value=66 Score=21.04 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=32.2
Q ss_pred ccCHHHHHHHHHHHHhhCCCCCCchHHHHhhcCCCCCCHHHHHHhhhh
Q 017108 269 RWTPELHECFVEAVNKLDGPEKATPKAVLKLMNVEGLTIYHVKSHLQK 316 (377)
Q Consensus 269 rWT~ELH~rFV~AV~qLGG~~kAtPK~IL~lM~v~gLT~~hVkSHLQK 316 (377)
.||++=+..|+.++.++|- ..=+.|-+.|+ +=|..+|+.|..+
T Consensus 1 ~Wt~eE~~~l~~~~~~~g~---~~w~~Ia~~~~--~rs~~~~~~~~~~ 43 (45)
T cd00167 1 PWTEEEDELLLEAVKKYGK---NNWEKIAKELP--GRTPKQCRERWRN 43 (45)
T ss_pred CCCHHHHHHHHHHHHHHCc---CCHHHHHhHcC--CCCHHHHHHHHHH
Confidence 4999999999999999972 23466777764 3677778777554
No 11
>smart00501 BRIGHT BRIGHT, ARID (A/T-rich interaction domain) domain. DNA-binding domain containing a helix-turn-helix structure
Probab=42.63 E-value=23 Score=28.64 Aligned_cols=46 Identities=15% Similarity=0.287 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhhCCCCCCc----hHHHHhhcCCCCC---CHHHHHHhhhhhh
Q 017108 272 PELHECFVEAVNKLDGPEKAT----PKAVLKLMNVEGL---TIYHVKSHLQKYR 318 (377)
Q Consensus 272 ~ELH~rFV~AV~qLGG~~kAt----PK~IL~lM~v~gL---T~~hVkSHLQKYR 318 (377)
-+|++.|. +|..+||.++.+ =+.|.+.||++.- ...++|+|-+||=
T Consensus 32 vdL~~Ly~-~V~~~GG~~~v~~~~~W~~Va~~lg~~~~~~~~~~~lk~~Y~k~L 84 (93)
T smart00501 32 LDLYRLYR-LVQERGGYDQVTKDKKWKEIARELGIPDTSTSAASSLRKHYERYL 84 (93)
T ss_pred CcHHHHHH-HHHHccCHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHHHHHHh
Confidence 47899998 599999987533 3568889998742 3456787777763
No 12
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.
Probab=41.92 E-value=34 Score=31.96 Aligned_cols=53 Identities=28% Similarity=0.350 Sum_probs=40.2
Q ss_pred CCCCCCCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHh-hcC-CCCCCHHHHHHhhhhhhhc
Q 017108 260 SATAHKPRMRWTPELHECFVEAVNKLDGPEKATPKAVLK-LMN-VEGLTIYHVKSHLQKYRLA 320 (377)
Q Consensus 260 ~~~~~KpRlrWT~ELH~rFV~AV~qLGG~~kAtPK~IL~-lM~-v~gLT~~hVkSHLQKYRl~ 320 (377)
+.+....++||...+-.++.+||... |.-.+ .+. ...||+..|-+-||.|...
T Consensus 41 ~RTsAACGFRWNs~VRkqY~~~i~~A--------KkqRk~~~~~~~~ltl~~vI~fLq~l~~~ 95 (161)
T TIGR02894 41 NRTAAACGFRWNAYVRKQYEEAIELA--------KKQRKELKREAGSLTLQDVISFLQNLKTT 95 (161)
T ss_pred cccHHHhcchHHHHHHHHHHHHHHHH--------HHHHhccccCcccCCHHHHHHHHHHHHhc
Confidence 34566789999999999999999876 22222 122 3669999999999999853
No 13
>PF07384 DUF1497: Protein of unknown function (DUF1497); InterPro: IPR009972 This entry is represented by Bacteriophage r1t, Orf17. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins of around 59 residues in length. Members of this family seem to be found exclusively in Lactococcus lactis and the bacteriophages that infect this organism. The function of this family is unknown.
Probab=33.31 E-value=37 Score=26.69 Aligned_cols=22 Identities=27% Similarity=0.533 Sum_probs=19.2
Q ss_pred cccCHHHHHHHHHHHHhhCCCC
Q 017108 268 MRWTPELHECFVEAVNKLDGPE 289 (377)
Q Consensus 268 lrWT~ELH~rFV~AV~qLGG~~ 289 (377)
-++..|+|..|-+-|.+|||.+
T Consensus 36 ~kfnqem~aefheri~klggk~ 57 (59)
T PF07384_consen 36 NKFNQEMQAEFHERIKKLGGKN 57 (59)
T ss_pred hHhhHHHHHHHHHHHHHhcccc
Confidence 3578999999999999999854
No 14
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=33.14 E-value=33 Score=26.60 Aligned_cols=19 Identities=37% Similarity=0.559 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhhhhhhhhc
Q 017108 357 TEALRMQMEVQKQLHEQLE 375 (377)
Q Consensus 357 tEALrmQmEVQkrLhEQLE 375 (377)
-.-|.-|+||||+|+=++|
T Consensus 15 QrrLhEQLEvQr~Lqlrie 33 (51)
T PF14379_consen 15 QRRLHEQLEVQRHLQLRIE 33 (51)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4467789999999987665
No 15
>KOG3841 consensus TEF-1 and related transcription factor, TEAD family [Transcription]
Probab=23.75 E-value=51 Score=34.87 Aligned_cols=55 Identities=24% Similarity=0.335 Sum_probs=36.1
Q ss_pred CCCcccCHHHHHHHHHHHHhhCCCCCCchHHHHh--------------hcC---CCCCCHHHHHHhhhhhhhcc
Q 017108 265 KPRMRWTPELHECFVEAVNKLDGPEKATPKAVLK--------------LMN---VEGLTIYHVKSHLQKYRLAK 321 (377)
Q Consensus 265 KpRlrWT~ELH~rFV~AV~qLGG~~kAtPK~IL~--------------lM~---v~gLT~~hVkSHLQKYRl~k 321 (377)
-.-=+|.++.-+.|.+|+...- ..-+-|-||. -++ =+-=|+.+|.||.|..-..|
T Consensus 74 daegvWSpdIEqsFqEALaiyp--pcGrrKIilsdegkmyGRNELIarYIKlrtgktRTrKQVSSHIQVlarrk 145 (455)
T KOG3841|consen 74 DAEGVWSPDIEQSFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRK 145 (455)
T ss_pred ccccccChhHHHHHHHHHhhcC--CCCceeEEEccCccccchHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence 3445899999999999998862 1113344442 111 14468899999999865443
No 16
>PHA02827 hypothetical protein; Provisional
Probab=21.37 E-value=95 Score=28.80 Aligned_cols=42 Identities=33% Similarity=0.434 Sum_probs=30.4
Q ss_pred HHHHHhhCCCCCCchHHH--HhhcC-C-CCCCHHHHHHhhhhhhhcc
Q 017108 279 VEAVNKLDGPEKATPKAV--LKLMN-V-EGLTIYHVKSHLQKYRLAK 321 (377)
Q Consensus 279 V~AV~qLGG~~kAtPK~I--L~lM~-v-~gLT~~hVkSHLQKYRl~k 321 (377)
-.+++.-||..+.++..+ +.+|. + ..-.+.|||+-||. |+.+
T Consensus 104 a~vAe~Wg~~~~p~~~s~~vl~lm~~ll~d~dl~~ik~~L~~-RL~~ 149 (150)
T PHA02827 104 ARAAEYWGGESSPTPASAKVLELLMELLTDNDISHVKSALII-RLKR 149 (150)
T ss_pred HHHHHHHCCCCCCchHHHHHHHHHHHHcChhhHHHHHHHHHH-HHhc
Confidence 345666789888898877 66665 3 44558899999997 6654
Done!