BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017112
(377 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 167/351 (47%), Gaps = 32/351 (9%)
Query: 20 LFPCSEKHT-----FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPF 74
L PC K + + V KTY +RI + L FAI H VVE D Y +PF
Sbjct: 190 LEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPF 249
Query: 75 TTEAILIAPGQTTNVLVQANQKPGR-YFMAARPFNDAPIPVDNKTATGILQYKGIPNSL- 132
T I I G++ +VL+ +Q P Y+++ P T G+ +PNS+
Sbjct: 250 YTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP-----NTPPGLTLLNYLPNSVS 304
Query: 133 -LPTLA--QLPASNDSEFALNYNKKLRS-LNSPKFPADVPQKVDRKLFYTIGFGKDSCPT 188
LPT Q PA +D + + N+ ++ + + SPK P K +R++F +
Sbjct: 305 KLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPV----KFNRRIFLL------NTQN 354
Query: 189 CVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGT 248
+NG A +N++S +P T L A +NL F P T T
Sbjct: 355 VINGYVKWA-INDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNE-KT 412
Query: 249 SRATRLSKIAFNSTIELVLQDTNLLT---VESHPFHLHGYNFFVVGTGIGNFDPVKYPAN 305
+ + ++++LQ+ N++ E+HP+HLHG++F+V+G G G F + ++
Sbjct: 413 RIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS-AEEESS 471
Query: 306 YNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFA 356
NL +P RNT + GWTAIRF ADNPGVW HCH+E H G+ FA
Sbjct: 472 LNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFA 522
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 149/336 (44%), Gaps = 62/336 (18%)
Query: 31 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 90
+ V+SGK Y RI++ + F+I GH TV+EVD V +P T +++ I GQ +V+
Sbjct: 214 VSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVV 273
Query: 91 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 150
V+ANQ G Y++ A P N + I +Y+G +A+ S +S ALN
Sbjct: 274 VEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQG------AAVAEPTTSQNSGTALN 326
Query: 151 YNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 209
L L +P P + VP D L IG N T T+N F+ P
Sbjct: 327 -EANLIPLINPGAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTV 376
Query: 210 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 268
LLQ L GV GA ++ + N IE+ +
Sbjct: 377 PVLLQI----LSGVTNPNDLLPG-------GAVIS-------------LPANQVIEISIP 412
Query: 269 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPAN--YNLVDPIERNTAAVPTGG-WT 325
+HPFHLHG+ NFD V+ P + YN V+P+ R+ ++ GG
Sbjct: 413 GGG-----NHPFHLHGH----------NFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNV 457
Query: 326 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361
RF DNPG WF+HCH++ H GL FA ED P
Sbjct: 458 TFRFVTDNPGPWFLHCHIDWHLEAGLAVVFA-EDIP 492
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 150/373 (40%), Gaps = 71/373 (19%)
Query: 7 MSDAHTINGKPGPLFPCSEKHTF----------------AMEVESGKTYLLRIINAALND 50
++D + + GP FP T + V+ GK Y R+++ + +
Sbjct: 148 LTDWYHTAARLGPRFPLGADATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDP 207
Query: 51 ELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDA 110
F+I GHN TV+EVD + ++P ++I I Q + ++ ANQ G Y++ A P N
Sbjct: 208 NYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVGNYWIRANP-NFG 266
Query: 111 PIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD-VPQ 169
+ + IL+Y+G P +A+ + + L L P P
Sbjct: 267 TVGFAGGINSAILRYQGAP------VAEPTTTQTTSVIPLIETNLHPLARMPVPGSPTPG 320
Query: 170 KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXX 228
VD+ L F NGT +NN SF P LLQ
Sbjct: 321 GVDKALNLAFNF---------NGTNFF--INNASFTPPTVPVLLQI-------------- 355
Query: 229 XXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFF 288
+GA L A + + +STIE+ L T L HPFHLHG+ F
Sbjct: 356 --------LSGAQTAQDL--LPAGSVYPLPAHSTIEITLPATALAPGAPHPFHLHGHAFA 405
Query: 289 VVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLEL 345
VV + YN DPI R+ + T G IRF+ DNPG WF+HCH++
Sbjct: 406 VVRSAGST--------TYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDF 457
Query: 346 HTGWGLKTAFAVE 358
H G FA +
Sbjct: 458 HLEAGFAIVFAED 470
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 156/364 (42%), Gaps = 55/364 (15%)
Query: 1 MGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHN 60
+G P +DA ING G + V GK Y R+++ + + F+I GH+
Sbjct: 158 VGSPVPTADATLINGL-GRSIDTLNADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHS 216
Query: 61 FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTAT 120
TV+E D+V KP T ++I I Q + ++ A+Q G Y++ A P N D +
Sbjct: 217 LTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQDVGNYWIRALP-NSGTRNFDGGVNS 275
Query: 121 GILQYKGIPNSLLPTLAQLPASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTI 179
IL+Y G + PT +Q P++N E AL L +P PA P VD L
Sbjct: 276 AILRYDGAA-PVEPTTSQTPSTNPLVESAL---TTLEGTAAPGSPA--PGGVDLALNMAF 329
Query: 180 GFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYT 238
GF G + T+N SF P LLQ +
Sbjct: 330 GFA---------GGKF--TINGASFTPPTVPVLLQI----------------------LS 356
Query: 239 GAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFD 298
GA L S + + + N+ IE+ L T HPFHLHG+ F VV +
Sbjct: 357 GAQSAQDLLPSGS--VYSLPANADIEISLPATAAAPGFPHPFHLHGHTFAVVRSAGS--- 411
Query: 299 PVKYPANYNLVDPIERNTAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV 357
+ YN +P+ R+ + + G IRFR DNPG WF+HCH++ H G A
Sbjct: 412 -----STYNYENPVYRDVVSTGSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA- 465
Query: 358 EDGP 361
ED P
Sbjct: 466 EDIP 469
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 154/356 (43%), Gaps = 58/356 (16%)
Query: 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDA 68
DA INGK G + VE GK Y +R+I+ + + F+I GH T++EVD
Sbjct: 166 DATLINGK-GRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDG 224
Query: 69 VYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARP---FNDAPIPVDNKTATGILQY 125
T+P T + + I GQ + ++ ANQ Y++ A+P N N + IL+Y
Sbjct: 225 ELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRY 284
Query: 126 KGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKD 184
G N+ T ++N + LN L +L P P P D L + +GF
Sbjct: 285 AGAANADPTT-----SANPNPAQLN-EADLHALIDPAAPGIPTPGAADVNLRFQLGF--- 335
Query: 185 SCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLT 243
+G R T+N ++ P LLQ +GA
Sbjct: 336 ------SGGRF--TINGTAYESPSVPTLLQI----------------------MSGAQSA 365
Query: 244 ASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYP 303
L A + ++ N +ELV+ L HPFHLHG+ F VV +
Sbjct: 366 NDL--LPAGSVYELPRNQVVELVVPAGVLGG--PHPFHLHGHAFSVVRS--------AGS 413
Query: 304 ANYNLVDPIERNTAAVP-TGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358
+ YN V+P++R+ ++ TG IRF DNPG WF HCH+E H GL FA +
Sbjct: 414 STYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 154/356 (43%), Gaps = 58/356 (16%)
Query: 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDA 68
DA INGK G + VE GK Y +R+I+ + + F+I GH T++EVD
Sbjct: 166 DATLINGK-GRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDG 224
Query: 69 VYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARP---FNDAPIPVDNKTATGILQY 125
T+P T + + I GQ + ++ ANQ Y++ A+P N N + IL+Y
Sbjct: 225 ELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRY 284
Query: 126 KGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPA-DVPQKVDRKLFYTIGFGKD 184
G N+ T ++N + LN L +L P P P D L + +GF
Sbjct: 285 AGAANADPTT-----SANPNPAQLN-EADLHALIDPAAPGIPTPGAADVNLRFQLGF--- 335
Query: 185 SCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLT 243
+G R T+N ++ P LLQ +GA
Sbjct: 336 ------SGGRF--TINGTAYESPSVPTLLQI----------------------MSGAQSA 365
Query: 244 ASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYP 303
L A + ++ N +ELV+ L HPFHLHG+ F VV +
Sbjct: 366 NDL--LPAGSVYELPRNQVVELVVPAGVLGG--PHPFHLHGHAFSVVRS--------AGS 413
Query: 304 ANYNLVDPIERNTAAVP-TGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358
+ YN V+P++R+ ++ TG IRF DNPG WF HCH+E H GL FA +
Sbjct: 414 STYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAED 469
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 152/364 (41%), Gaps = 55/364 (15%)
Query: 1 MGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHN 60
+G P +DA ING G + V GK Y R+++ + + F+I GH+
Sbjct: 158 VGAPVPTADATLINGL-GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHS 216
Query: 61 FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTAT 120
TV+E D+V KP T +++ I Q + ++ A+Q Y++ A P N T +
Sbjct: 217 LTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNYWIRALP-NSGTQNFAGGTNS 275
Query: 121 GILQYKGIPNSLLPTLAQLPASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTI 179
IL+Y G + PT +Q P++N E AL K + SP P VD L
Sbjct: 276 AILRYDGAA-PVEPTTSQTPSTNPLVESALTTLKGTAAPGSP-----TPGGVDLALNMAF 329
Query: 180 GFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYT 238
GF + T+N SF P LLQ +
Sbjct: 330 GFAGGNF-----------TINGASFTPPTVPVLLQI----------------------LS 356
Query: 239 GAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFD 298
GA A L A + + N+ IE+ L T HPFHLHG+ F VV +
Sbjct: 357 GAQSAADL--LPAGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--- 411
Query: 299 PVKYPANYNLVDPIERNTAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV 357
+ YN +P+ R+ + G IRFR DNPG WF+HCH++ H G A
Sbjct: 412 -----STYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA- 465
Query: 358 EDGP 361
ED P
Sbjct: 466 EDIP 469
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 152/364 (41%), Gaps = 55/364 (15%)
Query: 1 MGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHN 60
+G P +DA ING G + V GK Y R+++ + + F+I GH+
Sbjct: 158 VGAPVPTADATLINGL-GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHS 216
Query: 61 FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTAT 120
TV+E D+V KP T +++ I Q + ++ A+Q Y++ A P N T +
Sbjct: 217 LTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNYWIRALP-NSGTQNFAGGTNS 275
Query: 121 GILQYKGIPNSLLPTLAQLPASND-SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTI 179
IL+Y G + PT +Q P++N E AL K + SP P VD L
Sbjct: 276 AILRYDGAA-PVEPTTSQTPSTNPLVESALTTLKGTAAPGSP-----TPGGVDLALNMAF 329
Query: 180 GFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYT 238
GF + T+N SF P LLQ +
Sbjct: 330 GFAGGNF-----------TINGASFTPPTVPVLLQI----------------------LS 356
Query: 239 GAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFD 298
GA A L A + + N+ IE+ L T HPFHLHG+ F VV +
Sbjct: 357 GAQSAADL--LPAGSVYSLPANADIEISLPATAAAPGFPHPFHLHGHVFAVVRSAGS--- 411
Query: 299 PVKYPANYNLVDPIERNTAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV 357
+ YN +P+ R+ + G IRFR DNPG WF+HCH++ H G A
Sbjct: 412 -----STYNYANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVMA- 465
Query: 358 EDGP 361
ED P
Sbjct: 466 EDIP 469
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 161/378 (42%), Gaps = 62/378 (16%)
Query: 3 LPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFT 62
PPN +D+ ING G + + VE K Y R+++ + + F+I GHN T
Sbjct: 162 FPPN-ADSVLINGL-GRFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMT 219
Query: 63 VVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGI 122
++EVD V +P ++I I Q + ++ A Q Y++ A P N I + I
Sbjct: 220 IIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVDNYWIRAIP-NTGTIDTTGGLNSAI 278
Query: 123 LQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGF 181
L+Y G + + PT A+ + L L+SP P D V VD + F
Sbjct: 279 LRYSG-ADIVDPT-----ANATTSVIPLVETDLVPLDSPAAPGDPVVGGVDLAMNLDFSF 332
Query: 182 GKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGA 240
NGT +NN + + P LLQ L G A TG+
Sbjct: 333 ---------NGTNFF--INNETLIPPTVPVLLQI----LSGAQSASDLLP-------TGS 370
Query: 241 PLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVES-----HPFHLHGYNFFVVGTGIG 295
T L NSTIEL T + V + HPFHLHG+ F VV + G
Sbjct: 371 VYTLPL-------------NSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVVRSA-G 416
Query: 296 NFDPVKYPANYNLVDPIERNTAAVPT-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTA 354
+ D YN V+P+ R+T + G IRF DN G WF+HCH++ H G
Sbjct: 417 SSD-------YNYVNPVRRDTVSTGNPGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIV 469
Query: 355 FAVEDGPGPDQSVLPPPT 372
FA ED P SV P PT
Sbjct: 470 FA-EDTPDT-ASVNPVPT 485
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 152/363 (41%), Gaps = 59/363 (16%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVV 64
P +DA INGK G S ++V GK Y R+++ + N F+I GHN T++
Sbjct: 163 PGGADATLINGK-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTII 221
Query: 65 EVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQ 124
EVD+V ++P ++I I Q + ++ ANQ Y++ A P N + D + IL+
Sbjct: 222 EVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP-NFGNVGFDGGINSAILR 280
Query: 125 YKGIPNSLLPTLAQLPASNDSEFALNYNK-KLRSLNSPKFP-ADVPQKVDRKLFYTIGFG 182
Y G P A P +N + N+ L L S P A VD+ + F
Sbjct: 281 YDGAP-------AVEPTTNQTTSVKPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNF- 332
Query: 183 KDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAP 241
NG+ +N SFV P LLQ +GA
Sbjct: 333 --------NGSNFF--INGASFVPPTVPVLLQI----------------------LSGAQ 360
Query: 242 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVK 301
L S + + + N++IE+ T HPFHLHG+ F VV +
Sbjct: 361 TAQDLLPSGSVYV--LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV---- 414
Query: 302 YPANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358
YN +PI R+ + T G IRF +NPG WF+HCH++ H G A E
Sbjct: 415 ----YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-E 469
Query: 359 DGP 361
D P
Sbjct: 470 DTP 472
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 151/363 (41%), Gaps = 59/363 (16%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVV 64
P +DA INGK G S ++V GK Y R+++ + N F+I GHN T++
Sbjct: 163 PGGADATLINGK-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTII 221
Query: 65 EVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQ 124
EVD+V ++P ++I I Q + ++ ANQ Y++ A P N + D + IL+
Sbjct: 222 EVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP-NFGNVGFDGGINSAILR 280
Query: 125 YKGIPNSLLPTLAQLPASNDSEFALNYNK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFG 182
Y G P A P +N + N+ L L S P VD+ + F
Sbjct: 281 YDGAP-------AVEPTTNQTTSVKPLNEVDLHPLVSTPVPGSPSSGGVDKAINMAFNF- 332
Query: 183 KDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAP 241
NG+ +N SFV P LLQ +GA
Sbjct: 333 --------NGSNFF--INGASFVPPTVPVLLQI----------------------LSGAQ 360
Query: 242 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVK 301
L S + + + N++IE+ T HPFHLHG+ F VV +
Sbjct: 361 TAQDLLPSGSVYV--LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV---- 414
Query: 302 YPANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358
YN +PI R+ + T G IRF +NPG WF+HCH++ H G A E
Sbjct: 415 ----YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMA-E 469
Query: 359 DGP 361
D P
Sbjct: 470 DTP 472
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 144/375 (38%), Gaps = 71/375 (18%)
Query: 7 MSDAHTINGKPGPLFPCSEKHTF----------------AMEVESGKTYLLRIINAALND 50
++D + + K GP FP T + V GK Y R+++ + +
Sbjct: 148 LADWYHVAAKLGPRFPKGADSTLINGLGRSTSTPTADLAVISVTKGKRYRFRLVSLSCDP 207
Query: 51 ELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDA 110
F+I H TV+E D V T+P T ++I I Q + ++ ANQ Y++ A P N
Sbjct: 208 NYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVDNYWIRANP-NFG 266
Query: 111 PIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQK 170
+ + IL+Y P +N + L L L S P + P +
Sbjct: 267 TTGFADGVNSAILRYDDAD-------PVEPVTNQTGTTLLLETDLHPLTSMPVPGN-PTQ 318
Query: 171 VDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXX 229
L + F D +NG SF P LLQ
Sbjct: 319 GGADLNLNMAFNFDGTNFFINGE---------SFTPPTVPVLLQI--------------- 354
Query: 230 XXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFV 289
+GA L S + + + NS+IE+ T HPFHLHG+ F V
Sbjct: 355 -------ISGANTAQDLLPSGS--VYSLPSNSSIEITFPATTAAPGAPHPFHLHGHVFAV 405
Query: 290 VGTGIGNFDPVKYPANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLELH 346
V + +YN DP+ R+ + T G IRF+ DNPG WF+HCH++ H
Sbjct: 406 VRSAGS--------TSYNYDDPVWRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFH 457
Query: 347 TGWGLKTAFAVEDGP 361
G A ED P
Sbjct: 458 LDAGFAVVMA-EDIP 471
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 148/359 (41%), Gaps = 56/359 (15%)
Query: 5 PNMSDAHTINGK-PGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTV 63
P +DA ING+ GP P ++ + V +GK Y R+++ + + F+I GH T+
Sbjct: 163 PGGADATLINGQGRGPSSPSADLAV--ISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTI 220
Query: 64 VEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGIL 123
++VD++ +P I I Q + ++ ANQ Y++ A P N + N + IL
Sbjct: 221 IQVDSINVQPLVVLKIQIYAAQRYSFILNANQAVNNYWIRANP-NQGNVGFTNGINSAIL 279
Query: 124 QYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD-VPQKVDRKLFYTIGFG 182
+Y G + PT +Q + + L L + P V V+ + F
Sbjct: 280 RYSGAA-ATQPTTSQTSSVQPLD-----QTNLHPLTATAVPGSPVAGGVNLAINQAFNF- 332
Query: 183 KDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPL 242
NGT ++ SFV P +L +GA
Sbjct: 333 --------NGTNHF--VDGASFVPPTVPVLSQIV---------------------SGAQS 361
Query: 243 TASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKY 302
A L S + + ++ IE+ T+ HPFHLHG+ F VV +
Sbjct: 362 AADLLASG--LVYSLPSDANIEISFPATSAAAGGPHPFHLHGHAFAVVRSAGS------- 412
Query: 303 PANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358
YN DPI R+T + T IRF+ +NPG WF+HCH++ H G FA +
Sbjct: 413 -TTYNYNDPIFRDTVSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVFAQD 470
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 143/334 (42%), Gaps = 55/334 (16%)
Query: 31 MEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVL 90
+ VE GK Y +R+++ + + F+I GH+ T++E D V ++ T + I I Q + +
Sbjct: 191 ITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFV 250
Query: 91 VQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 150
+ ANQ G Y++ A P N D + IL+Y G + T+A +
Sbjct: 251 LNANQPVGNYWIRANP-NSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-----CL 304
Query: 151 YNKKLRSLNSPKFPADVPQK-VDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT 209
L L+ P + Q D L ++GF +C V +N +SF P
Sbjct: 305 IETDLHPLSRNGVPGNPHQGGADCNLNLSLGF---ACGNFV--------INGVSFTPPTV 353
Query: 210 -ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQ 268
LLQ +GA A L S + + + NSTIE+ L
Sbjct: 354 PVLLQI----------------------CSGANTAADLLPSGS--VISLPSNSTIEIALP 389
Query: 269 DTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP-TGGWTAI 327
HPFHLHG++F V + +NY+ DPI R+ ++ G I
Sbjct: 390 AG--AAGGPHPFHLHGHDFAVSESA------SNSTSNYD--DPIWRDVVSIGGVGDNVTI 439
Query: 328 RFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361
RF DNPG WF+HCH++ H G FA ED P
Sbjct: 440 RFCTDNPGPWFLHCHIDWHLDAGFAIVFA-EDIP 472
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 151/366 (41%), Gaps = 65/366 (17%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVV 64
PN +D+ INGK G S + V GK R+++ + + F+I GHN T++
Sbjct: 163 PNGADSTLINGK-GRAPSDSSAQLSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTII 221
Query: 65 EVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQ 124
E D+V ++P T++I I Q + + ANQ Y++ A P N + + + IL+
Sbjct: 222 ETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVDNYWIRANP-NFGNVGFNGGINSAILR 280
Query: 125 YKGIPNSLLPTLAQLPASNDSEFALNYNK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFG 182
Y G P A P +N S N+ L L S P VD+ + F
Sbjct: 281 YDGAP-------AVEPTTNQSTSTQPLNETNLHPLVSTPVPGSPAAGGVDKAINMAFNF- 332
Query: 183 KDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAP 241
NG+ +N SF P LLQ +GA
Sbjct: 333 --------NGSNFF--INGASFTPPSVPVLLQI----------------------LSGAQ 360
Query: 242 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVK 301
L S + + + N++IE+ T HPFHLHG+ F VV +
Sbjct: 361 TAQDLLPSGS--VXTLPSNASIEISFPATAAAPGAPHPFHLHGHVFAVVRSAGSTV---- 414
Query: 302 YPANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV- 357
YN +PI R+ + T G IRF +NPG WF+HCH++ H L+ FAV
Sbjct: 415 ----YNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFH----LEGGFAVV 466
Query: 358 --EDGP 361
ED P
Sbjct: 467 QAEDVP 472
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 153/366 (41%), Gaps = 65/366 (17%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVV 64
P +DA INGK G + ++V GK R+++ + + F+I GHN T++
Sbjct: 163 PAGADATLINGK-GRAPSDTSAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTII 221
Query: 65 EVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQ 124
EVD+ ++P + ++I I Q + ++ ANQ Y++ A P N + + + IL+
Sbjct: 222 EVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVDNYWIRANP-NFGNVGFNGGINSAILR 280
Query: 125 YKGIPNSLLPTLAQLPASNDSEFALNYNK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFG 182
Y G P A P +N + N+ L L S P VD+ + F
Sbjct: 281 YDGAP-------AVEPTTNQTTSVKPLNEVNLHPLVSTPVPGSPSSGGVDKAINMAFNF- 332
Query: 183 KDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAP 241
NG+ +N SFV P LLQ +GA
Sbjct: 333 --------NGSNFF--INGASFVPPSVPVLLQI----------------------LSGAQ 360
Query: 242 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVK 301
L S + + + N++IE+ T HPFHLHG+ F VV +
Sbjct: 361 TAQDLLPSGSVXV--LPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV---- 414
Query: 302 YPANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV- 357
YN +PI R+ + T G IRF +NPG WF+HCH++ H L+ FAV
Sbjct: 415 ----YNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFH----LEGGFAVV 466
Query: 358 --EDGP 361
ED P
Sbjct: 467 QAEDVP 472
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 149/374 (39%), Gaps = 70/374 (18%)
Query: 7 MSDAHTINGKPGPLFPCSEKHTF----------------AMEVESGKTYLLRIINAALND 50
++D + + K GP FP T ++V GK Y R+++ + +
Sbjct: 148 LADWYHVAAKLGPRFPFGSDSTLINGLGRTTGIAPSDLAVIKVTQGKRYRFRLVSLSCDP 207
Query: 51 ELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARP-FND 109
F+I H T++E D++ T+P ++I I Q + ++ A+Q Y++ A P F +
Sbjct: 208 NHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDASQPVDNYWIRANPAFGN 267
Query: 110 APIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQ 169
+ IL+Y G P ++ P +E L+ + SP+ P
Sbjct: 268 TGFA--GGINSAILRYDGAPEIEPTSVQTTPTKPLNEVDLHPLSPMPVPGSPE-----PG 320
Query: 170 KVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXX 228
VD+ L F NGT +N+ +FV P LLQ
Sbjct: 321 GVDKPLNLVFNF---------NGTNFF--INDHTFVPPSVPVLLQI-------------- 355
Query: 229 XXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFF 288
+GA L + + + NS+IE+ T HPFHLHG+ F
Sbjct: 356 --------LSGAQAAQDLVPEGSVFV--LPSNSSIEISFPATANAPGFPHPFHLHGHAFA 405
Query: 289 VVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT-GGWTAIRFRADNPGVWFMHCHLELHT 347
VV + + YN +PI R+ + G IRF +NPG WF+HCH++ H
Sbjct: 406 VVRSAGSSV--------YNYDNPIFRDVVSTGQPGDNVTIRFETNNPGPWFLHCHIDFHL 457
Query: 348 GWGLKTAFAVEDGP 361
G A ED P
Sbjct: 458 DAGFAVVMA-EDTP 470
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 129/329 (39%), Gaps = 55/329 (16%)
Query: 32 EVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLV 91
EV+ TYLLRI+N +F I H TVVE+D + T+ T+ + I Q VLV
Sbjct: 181 EVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLV 240
Query: 92 QANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNY 151
+ F + F+D + V LQ + A LP N + N+
Sbjct: 241 HTKNDTDKNFAIMQKFDDTMLDV----IPSDLQLNATSYMVYNKTAALPTQNYVDSIDNF 296
Query: 152 NKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTAL 211
P + + D + T+ D+ VN A NNI++ P+
Sbjct: 297 LDDFYL--QPYEKEAIYGEPDHVI--TVDVVMDNLKNGVN----YAFFNNITYTAPKVPT 348
Query: 212 LQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL--QD 269
L V + G S T + + +E+VL QD
Sbjct: 349 LMT-------VLSS-------------GDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388
Query: 270 TNLLTVESHPFHLHGYNFFVV----------GTGIGNFDPVKYPA--NYNLVDPIERNTA 317
T +HPFHLHG+ F + G +FDP +PA Y P+ R+T
Sbjct: 389 TG-----THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEY----PMRRDTL 439
Query: 318 AVPTGGWTAIRFRADNPGVWFMHCHLELH 346
V IRF+ADNPGVWF HCH+E H
Sbjct: 440 YVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 146/363 (40%), Gaps = 59/363 (16%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVV 64
P +DA INGK G + + V GK Y R+++ + + F+I GHN T++
Sbjct: 163 PLGADATLINGK-GRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTII 221
Query: 65 EVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQ 124
E D++ T P ++I I Q + +++ANQ Y++ A P N + + IL+
Sbjct: 222 ETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVDNYWIRANP-NFGNVGFTGGINSAILR 280
Query: 125 YKGIPNSLLPTLAQLPASNDSEFALNYNK-KLRSLNSPKFPAD-VPQKVDRKLFYTIGFG 182
Y G A P + + N+ L L + P V VD + F
Sbjct: 281 YDG-------AAAVEPTTTQTTSTAPLNEVNLHPLVATAVPGSPVAGGVDLAINMAFNF- 332
Query: 183 KDSCPTCVNGTRLLATLNNISFVMPQT-ALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAP 241
NGT +N SF P LLQ +GA
Sbjct: 333 --------NGTNFF--INGASFTPPTVPVLLQI----------------------ISGAQ 360
Query: 242 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVK 301
L S + + + N+ IE+ T HPFHLHG+ F VV +
Sbjct: 361 NAQDLLPSGS--VYSLPSNADIEISFPATAAAPGAPHPFHLHGHAFAVVRSAGSTV---- 414
Query: 302 YPANYNLVDPIERNTAAVPT---GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358
YN +PI R+ + T G IRFR DNPG WF+HCH++ H G FA E
Sbjct: 415 ----YNYDNPIFRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFA-E 469
Query: 359 DGP 361
D P
Sbjct: 470 DIP 472
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVW 337
HP HLHG++FF+V F+ + PA +NLV+P R+ AA+P G+ AI F+ DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 338 FMHCHLELHTGWGLKTAF 355
+HCH+ H GL F
Sbjct: 523 LLHCHIAWHASEGLAMQF 540
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 1 MGLPPNMSDAHTINGKPGPLFPCSEK---------HTFAMEVESGKTYLLRIINAALNDE 51
+G PP + + +NG F CS F + G Y LR+IN ++
Sbjct: 219 LGAPPALENT-LMNGTN--TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSH 275
Query: 52 LFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAP 111
FAI H TV+ D V P+TT+ +LI GQ +V+V+AN Y++
Sbjct: 276 FEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCS 335
Query: 112 IPVDNKTATGILQYK 126
+ ATGIL+Y
Sbjct: 336 TNNEAANATGILRYD 350
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVW 337
HP HLHG++FF+V F+ + PA +NLV+P R+ AA+P G+ AI F+ DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 338 FMHCHLELHTGWGLKTAF 355
+HCH+ H G+ F
Sbjct: 523 LLHCHIAWHASEGMAMQF 540
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Query: 1 MGLPPNMSDAHTINGKPGPLFPCSEK---------HTFAMEVESGKTYLLRIINAALNDE 51
+G PP + + +NG F CS F + G Y LR+IN ++
Sbjct: 219 LGAPPALENT-LMNGTN--TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSH 275
Query: 52 LFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAP 111
FAI H TV+ D V P+TT+ +LI GQ +V+V+AN Y++
Sbjct: 276 FEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCS 335
Query: 112 IPVDNKTATGILQYK 126
+ ATGIL+Y
Sbjct: 336 TNNEAANATGILRYD 350
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 262 TIELVLQD-TNLLTVESHPFHLHGYNFFVVG--------TGIGN-FDPVKYPANYNLVDP 311
T L+ D TN + HP HLHG++F V+G G+ + FDP K +P
Sbjct: 455 TYWLIENDPTNPIVSLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNP 514
Query: 312 IERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAF 355
+ R+ +P GGW + F+ DNPG W HCH+ H GL F
Sbjct: 515 VRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDF 558
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 29 FAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 88
+ + + GK + LRIIN + ++ ++ GHN TV+ D V FT ++ +A GQ +
Sbjct: 256 YNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYD 315
Query: 89 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASN 143
V + AN G Y+ + +NK I +Y+G P + LPT LP N
Sbjct: 316 VTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAP-ATLPTDQGLPVPN 369
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 278 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 328
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 329 FRADNPGVWFMHCHLELHTGWGLKTAF 355
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFA-MEVESGKTYLLRIINAALNDELFFAIAGHNFTV 63
P SD ING + P + + +A + + GK + LRI+N + + ++ H TV
Sbjct: 192 PPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV 249
Query: 64 VEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFM 102
+ D V T +++ +A GQ +V++ A++ P Y+
Sbjct: 250 IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWF 288
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 278 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 328
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 329 FRADNPGVWFMHCHLELHTGWGLKTAF 355
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFA-MEVESGKTYLLRIINAALNDELFFAIAGHNFTV 63
P SD ING + P + + +A + + GK + LRI+N + + ++ H TV
Sbjct: 192 PPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV 249
Query: 64 VEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFM 102
+ D V T +++ +A GQ +V++ A++ P Y+
Sbjct: 250 IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWF 288
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 278 HPFHLHGYNFFVVGTGIGN---------FDPVKYPANYNLVDPIERNTAAVPTGGWTAIR 328
HP HLHG++F V+G FDP A N +P R+T +P GGW +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 329 FRADNPGVWFMHCHLELHTGWGLKTAF 355
FR DNPG W HCH+ H GL F
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSVDF 517
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 5 PNMSDAHTINGKPGPLFPCSEKHTFA-MEVESGKTYLLRIINAALNDELFFAIAGHNFTV 63
P SD ING + P + + +A + + GK + LRI+N + + ++ H TV
Sbjct: 192 PPFSDNVLINGTA--VNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTV 249
Query: 64 VEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFM 102
+ D V T +++ +A GQ +V++ A++ P Y+
Sbjct: 250 IAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWF 288
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 13 INGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVY-T 71
+NGK G L + + V T LR++NA+ A+ H ++ D +
Sbjct: 172 MNGKEGDLVLVNGALRPTL-VAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLE 230
Query: 72 KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPFN 108
+P +L+APG+ VLV+ +K GR+ + A P++
Sbjct: 231 EPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYD 266
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 278 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 335
H FHLHG+ + TG+ +DP L+D + N + G+ I PG
Sbjct: 212 HTFHLHGHRWLDNRTGMRTSEYDPSP------LIDIKDLNPGV--SFGFQVIAGEGVGPG 263
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDGPG 362
+W HCH++ H+ G+ F V + G
Sbjct: 264 MWMYHCHVQNHSDMGMAGMFLVRNADG 290
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 277 SHPFHLHGYNFFVVGTGI-GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 335
HPFH+HG F ++ + + G ++ A R+T V +R + D G
Sbjct: 406 DHPFHIHGTQFELISSKLNGKVQKAEFRA--------LRDTINVRPNEELRLRMKQDFKG 457
Query: 336 VWFMHCHLELHTGWGLKTAFAVED 359
+ HCH+ H G+ V++
Sbjct: 458 LRMYHCHILEHEDLGMMGNLEVKE 481
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
Query: 275 VESHPFHLHGYNFFVVGTGIGNFDPVK-YPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333
++ H H HG++F G+ + D +P Y ++ R
Sbjct: 991 IDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRT------------------ 1032
Query: 334 PGVWFMHCHLELHTGWGLKTAFAV 357
PG+W +HCH+ H G++T + V
Sbjct: 1033 PGIWLLHCHVTDHIHAGMETTYTV 1056
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 19/84 (22%)
Query: 275 VESHPFHLHGYNFFVVGTGIGNFDPVK-YPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333
++ H H HG++F G+ + D +P Y ++ R
Sbjct: 972 IDLHTVHFHGHSFQYKHRGVYSSDVFDIFPGTYQTLEMFPRT------------------ 1013
Query: 334 PGVWFMHCHLELHTGWGLKTAFAV 357
PG+W +HCH+ H G++T + V
Sbjct: 1014 PGIWLLHCHVTDHIHAGMETTYTV 1037
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 116/335 (34%), Gaps = 63/335 (18%)
Query: 41 LRIINAALNDELFFAIAGHN--FTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ-KP 97
LR++N L FA + + + + + +P + + G+ VLV+ N KP
Sbjct: 205 LRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKP 264
Query: 98 --------GRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSL--LPTLAQLPASNDSEF 147
+ MA PF D P PV I +P++L LP L L +
Sbjct: 265 FDLVTLPVSQMGMAIAPF-DKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKL 323
Query: 148 ALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP 207
L+ + L S S Q + K G + +A +++ S +M
Sbjct: 324 QLSMDPSLDSSGS--------QSLSEKY----------------GDQAMAGMDH-SQMMG 358
Query: 208 QTALLQAHYFNLKGVFKAXXXXXXXXXXNYTGAPLTASLGTSRATRLSKIAFNSTIELVL 267
++ N G F P+ A+ + + + +++L
Sbjct: 359 HMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAA----AKGQYERWVISGVGDMML 414
Query: 268 QDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 327
HPFH+HG F ++ P + A + +E N + V +
Sbjct: 415 ----------HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LV 456
Query: 328 RFRADNPG--VWFMHCHLELHTGWGLKTAFAVEDG 360
+F D P + HCHL H G+ F V G
Sbjct: 457 KFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQG 491
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 335
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDG 360
+ HCHL H G+ F V G
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTVLQG 491
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 10/85 (11%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 335
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDG 360
+ HCHL H G+ F V G
Sbjct: 467 AYMAHCHLLEHDDTGMMLGFTVLQG 491
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 335
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 367 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 418
Query: 336 VWFMHCHLELHTGWGLKTAFAV 357
+ HCHL H G+ F V
Sbjct: 419 AYMAHCHLLEHEDTGMMLGFTV 440
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 335
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 336 VWFMHCHLELHTGWGLKTAFAV 357
+ HCHL H G+ F V
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTV 488
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 335
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 336 VWFMHCHLELHTGWGLKTAFAV 357
+ HCHL H G+ F V
Sbjct: 467 AYMAHCHLLEHEDTGMMLGFTV 488
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 295 GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHT 347
G+ + + + L PI+ +T + G + DNPG+W +H H++ HT
Sbjct: 206 GHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHT 258
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 2 GLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNF 61
G+P ++ D +TIN K P T + V+ G LR+I A + GH
Sbjct: 158 GIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDHVHAIHT-HGHIS 209
Query: 62 TVVEVDAV-YTKPFTTEAILIAPGQTTNVLVQANQKPGRYFM 102
+ D KP + +LI PG+ +V++ + PG + +
Sbjct: 210 QIAFKDGFPLDKPIKGDTVLIGPGERYDVILNMDN-PGLWMI 250
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 278 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 335
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 193 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 244
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 367
W HCH++ H+ G+ F V+ PD ++
Sbjct: 245 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 273
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 278 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 335
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 231 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 282
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 367
W HCH++ H+ G+ F V+ PD ++
Sbjct: 283 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 311
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 278 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 335
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 194 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 245
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 367
W HCH++ H+ G+ F V+ PD ++
Sbjct: 246 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 274
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 34.7 bits (78), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 278 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 335
H FH+HG+ + TGI G DP + N + T + G+ I G
Sbjct: 190 HTFHMHGHRWADNRTGILTGPDDPSRVIDN--------KITGPADSFGFQIIAGEGVGAG 241
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 367
W HCH++ H+ G+ F V+ PD ++
Sbjct: 242 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 270
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From
Streptomyces Venezueale In Complex With D-glucose.
pdb|4I3G|B Chain B, Crystal Structure Of Desr, A Beta-glucosidase From
Streptomyces Venezueale In Complex With D-glucose
Length = 829
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 107 FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE---FALNYNKKLRSLNSPKF 163
F++ P+ V ++TA + Q KGI + L T A+ A+N+ E F++N N ++L +F
Sbjct: 168 FSEDPL-VSSRTA--VAQIKGIQGAGLMTTAKHFAANNQENNRFSVNANVDEQTLREIEF 224
Query: 164 PA-DVPQKVDRKLFYTIGFGKDSCPTCVN 191
PA + K F G + P+C N
Sbjct: 225 PAFEASSKAGAASFMCAYNGLNGKPSCGN 253
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 277 SHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI---ERNTAAVPTGGWTAIRFRADN 333
+HP H+H +F V+ GN P L D + R T V A
Sbjct: 397 THPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEA-------HYAPF 449
Query: 334 PGVWFMHCHLELHTGWGLKTAF 355
PGV+ HCH +H + AF
Sbjct: 450 PGVYMFHCHNLIHEDHDMMAAF 471
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 335
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDG 360
+ H HL H G+ F V G
Sbjct: 467 AYMAHSHLLEHEDTGMMLGFTVLQG 491
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 278 HPFHLHGYNFFVVGTGI--GNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG 335
H FHLHG+ + TG+ G DP + N + P + + G+ I G
Sbjct: 196 HTFHLHGHRWADNRTGMLTGPDDPSQVIDN-KICGPAD-------SFGFQVIAGEGVGAG 247
Query: 336 VWFMHCHLELHTGWGLKTAFAVEDGPGPDQSV 367
W HCH++ H+ G+ F V+ PD ++
Sbjct: 248 AWMYHCHVQSHSDMGMVGLFLVKK---PDGTI 276
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 278 HPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPG-- 335
HPFH+HG F ++ P + A + +E N + V ++F D P
Sbjct: 415 HPFHIHGTQFRILSE--NGKPPAAHRAGWKDTVKVEGNVSEV------LVKFNHDAPKEH 466
Query: 336 VWFMHCHLELHTGWGLKTAFAV 357
+ H HL H G+ F V
Sbjct: 467 AYMAHSHLLEHQDTGMMLGFTV 488
>pdb|1UN2|A Chain A, Crystal Structure Of Circularly Permuted Cpdsba_q100t99
Preserved Global Fold And Local Structural Adjustments
Length = 197
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 16/150 (10%)
Query: 88 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQL-----PAS 142
+V + A K Y A F + + A +Q +G+P + QL S
Sbjct: 11 DVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTS 70
Query: 143 NDSEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIG-----------FGKDSCPTCVN 191
N F Y ++ L+ K Q D K + T+ F CP C
Sbjct: 71 NMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQ 130
Query: 192 GTRLLATLNNISFVMPQTALLQAHYFNLKG 221
+L +N+ +P+ + ++ N G
Sbjct: 131 FEEVLHISDNVKKKLPEGVKMTKYHVNFMG 160
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 21 FPCSEKHTFAMEVESGKTYL--LRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEA 78
+P S++ +FA ++ SG YL + II+ LN HN V E V F A
Sbjct: 105 YPWSQRVSFAKDIASGMAYLHSMNIIHRDLN--------SHNCLVRENKNVVVADFGL-A 155
Query: 79 ILIAPGQTTNVLVQANQKPG---RYFMAARPFNDAPIPVDNKT 118
L+ +T +++ +KP RY + P+ AP ++ ++
Sbjct: 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS 198
>pdb|3CPQ|A Chain A, Crystal Structure Of L30e A Ribosomal Protein From
Methanocaldococcus Jannaschii Dsm2661 (Mj1044)
pdb|3CPQ|B Chain B, Crystal Structure Of L30e A Ribosomal Protein From
Methanocaldococcus Jannaschii Dsm2661 (Mj1044)
Length = 110
Score = 27.7 bits (60), Expect = 9.7, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 59 HNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPG 98
H T +E+ AV KPF A+L+ +N++ +K G
Sbjct: 69 HKITSLELGAVCGKPFPVAALLVLDEGLSNIMELVEKKEG 108
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,581,943
Number of Sequences: 62578
Number of extensions: 486661
Number of successful extensions: 1081
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 957
Number of HSP's gapped (non-prelim): 103
length of query: 377
length of database: 14,973,337
effective HSP length: 100
effective length of query: 277
effective length of database: 8,715,537
effective search space: 2414203749
effective search space used: 2414203749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)