Query 017112
Match_columns 377
No_of_seqs 202 out of 1362
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 09:08:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.5E-64 5.1E-69 510.3 37.2 349 6-377 165-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 5.1E-61 1.7E-65 481.7 34.1 310 4-360 221-545 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 1.1E-59 3.8E-64 466.6 32.1 306 4-359 162-471 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 5E-58 1.7E-62 454.7 36.3 304 4-359 164-471 (495)
5 1zpu_A Iron transport multicop 100.0 1.1E-58 3.9E-63 464.4 29.2 304 4-360 163-482 (534)
6 1v10_A Laccase; multicopper bl 100.0 2.3E-58 7.9E-63 461.5 29.7 315 5-377 188-508 (521)
7 1hfu_A Laccase 1; oxidoreducta 100.0 8.6E-57 2.9E-61 448.6 34.5 303 6-360 163-471 (503)
8 2q9o_A Laccase-1; multicopper 100.0 1.5E-56 5.1E-61 451.7 33.6 316 4-360 191-522 (559)
9 2xu9_A Laccase; oxidoreductase 100.0 1.3E-52 4.3E-57 412.3 31.0 249 6-357 175-438 (439)
10 3abg_A Bilirubin oxidase; clea 100.0 2.3E-51 7.7E-56 410.9 31.2 267 6-361 199-477 (534)
11 2wsd_A Spore coat protein A; o 100.0 2.1E-50 7.1E-55 403.5 30.8 271 5-359 227-510 (513)
12 2uxt_A Protein SUFI, SUFI; oxi 100.0 4.6E-50 1.6E-54 394.7 27.4 253 4-361 178-443 (451)
13 3aw5_A Multicopper oxidase; be 100.0 5.2E-50 1.8E-54 393.8 26.8 256 6-358 167-448 (448)
14 3gyr_A PHS, phenoxazinone synt 100.0 3.9E-49 1.3E-53 404.0 26.8 305 5-361 251-593 (612)
15 3zx1_A Oxidoreductase, putativ 100.0 6.2E-48 2.1E-52 380.1 30.0 260 7-358 210-480 (481)
16 2g23_A PHS, phenoxazinone synt 100.0 7.9E-48 2.7E-52 388.4 30.8 281 6-360 252-592 (612)
17 3od3_A Blue copper oxidase CUE 100.0 1.7E-46 5.9E-51 369.7 27.9 264 6-357 181-488 (488)
18 2dv6_A Nitrite reductase; elec 100.0 1.3E-30 4.3E-35 257.0 20.0 251 8-361 183-435 (447)
19 2zwn_A Two-domain type laccase 100.0 3.7E-29 1.3E-33 237.3 17.5 241 8-360 23-278 (339)
20 3cg8_A Laccase; oxidoreductase 100.0 6E-29 2E-33 235.8 18.3 216 28-362 76-309 (343)
21 3gdc_A Multicopper oxidase; be 100.0 1.5E-28 5.1E-33 228.0 19.4 234 8-359 54-288 (288)
22 3g5w_A Multicopper oxidase typ 100.0 2.8E-27 9.5E-32 222.2 19.3 243 9-361 23-278 (318)
23 3kw8_A Laccase, putative coppe 99.9 5.5E-27 1.9E-31 216.1 19.2 218 28-362 35-268 (276)
24 3t9w_A Small laccase, multi-co 99.9 5.5E-26 1.9E-30 211.6 20.3 218 28-362 57-290 (299)
25 3tas_A Small laccase, multi-co 99.9 1.4E-25 4.8E-30 210.3 19.0 99 254-364 175-276 (313)
26 2r7e_A Coagulation factor VIII 99.9 5.5E-25 1.9E-29 227.4 12.1 88 254-362 627-714 (742)
27 1sdd_A Coagulation factor V; c 99.9 7E-26 2.4E-30 211.8 2.7 231 28-361 59-302 (306)
28 2j5w_A Ceruloplasmin, ferroxid 99.9 2.3E-24 7.8E-29 231.4 12.0 92 252-361 969-1060(1065)
29 2j5w_A Ceruloplasmin, ferroxid 99.9 2.1E-22 7.3E-27 216.1 22.9 100 8-128 257-357 (1065)
30 1sdd_B Coagulation factor V; c 99.9 9.6E-22 3.3E-26 201.8 21.1 248 28-360 68-328 (647)
31 2bw4_A Copper-containing nitri 99.9 5.3E-21 1.8E-25 181.6 21.0 93 253-361 231-326 (340)
32 1kbv_A ANIA, major outer membr 99.9 3E-21 1E-25 182.1 18.1 249 9-361 59-309 (327)
33 2r7e_B Coagulation factor VIII 99.8 7.9E-22 2.7E-26 204.2 6.6 88 253-358 368-455 (770)
34 1mzy_A Copper-containing nitri 99.8 2.2E-18 7.4E-23 163.0 23.4 94 253-361 225-320 (333)
35 2r7e_A Coagulation factor VIII 99.8 6.7E-21 2.3E-25 196.9 6.2 89 254-363 245-333 (742)
36 2dv6_A Nitrite reductase; elec 99.8 1.2E-17 4.1E-22 164.3 21.8 234 9-360 45-282 (447)
37 1oe1_A Dissimilatory copper-co 99.8 2.3E-17 7.8E-22 156.2 22.5 107 253-375 225-335 (336)
38 2zoo_A Probable nitrite reduct 99.8 8.5E-18 2.9E-22 165.0 19.8 250 9-362 49-300 (442)
39 1kbv_A ANIA, major outer membr 99.8 3E-19 1E-23 168.3 8.5 113 7-129 197-309 (327)
40 2zwn_A Two-domain type laccase 99.7 1.4E-15 4.7E-20 144.0 16.4 114 7-129 164-279 (339)
41 2zoo_A Probable nitrite reduct 99.7 1.1E-16 3.9E-21 157.0 9.3 114 6-129 186-299 (442)
42 3g5w_A Multicopper oxidase typ 99.6 2.2E-15 7.6E-20 141.1 15.6 116 5-129 161-278 (318)
43 1mzy_A Copper-containing nitri 99.5 2E-13 7E-18 128.8 12.8 111 6-128 207-319 (333)
44 1oe1_A Dissimilatory copper-co 99.4 3.1E-13 1E-17 127.8 11.1 111 6-129 207-320 (336)
45 2bw4_A Copper-containing nitri 99.4 7.3E-13 2.5E-17 125.4 11.4 112 6-129 213-326 (340)
46 2aan_A Auracyanin A; cupredoxi 99.3 2.9E-12 9.8E-17 105.3 6.4 94 254-358 36-139 (139)
47 3cvb_A Plastocyanin; cupredoxi 99.3 3.8E-12 1.3E-16 99.2 6.1 85 253-358 19-104 (105)
48 1sdd_B Coagulation factor V; c 99.3 8.6E-12 3E-16 127.9 9.3 87 6-106 224-311 (647)
49 3gdc_A Multicopper oxidase; be 99.3 2.6E-11 8.8E-16 112.0 11.5 88 253-361 66-156 (288)
50 2xu9_A Laccase; oxidoreductase 99.2 1.7E-10 5.9E-15 112.7 12.8 77 254-344 189-265 (439)
51 1sdd_A Coagulation factor V; c 99.1 6.4E-12 2.2E-16 117.0 -1.8 84 7-106 200-284 (306)
52 3tas_A Small laccase, multi-co 99.0 4.6E-10 1.6E-14 104.8 8.8 87 11-105 163-254 (313)
53 2gim_A Plastocyanin; beta shee 99.0 7.5E-10 2.6E-14 86.2 8.4 83 254-358 21-105 (106)
54 1aoz_A Ascorbate oxidase; oxid 99.0 1.1E-08 3.8E-13 102.8 17.0 259 9-345 23-284 (552)
55 2r7e_B Coagulation factor VIII 98.9 1.7E-10 5.8E-15 119.6 2.5 85 8-105 354-439 (770)
56 3pxl_A Laccase; 4-copper prote 98.9 2E-08 6.8E-13 99.4 16.9 235 9-343 23-263 (499)
57 2uxt_A Protein SUFI, SUFI; oxi 98.9 4.7E-09 1.6E-13 102.8 11.6 224 8-345 38-272 (451)
58 1qhq_A Protein (auracyanin); e 98.9 3.5E-09 1.2E-13 86.8 8.3 98 254-358 34-139 (140)
59 1v10_A Laccase; multicopper bl 98.9 2.2E-08 7.4E-13 99.9 15.4 241 9-344 44-290 (521)
60 3t6v_A Laccase; beta barrel, o 98.9 3.3E-08 1.1E-12 97.7 16.4 237 9-343 24-266 (495)
61 3t9w_A Small laccase, multi-co 98.9 3.5E-09 1.2E-13 98.1 8.5 87 11-105 179-270 (299)
62 3kw8_A Laccase, putative coppe 98.9 9.6E-09 3.3E-13 94.1 10.2 87 11-106 157-249 (276)
63 3cg8_A Laccase; oxidoreductase 98.8 1.6E-08 5.4E-13 95.5 10.6 87 11-106 198-290 (343)
64 1pcs_A Plastocyanin; electron 98.8 1.3E-08 4.6E-13 77.9 8.3 78 254-358 20-98 (98)
65 2plt_A Plastocyanin; electron 98.8 1.5E-08 5.1E-13 77.6 7.8 80 254-358 19-98 (98)
66 1bxv_A Plastocyanin; copper pr 98.7 2.6E-08 8.9E-13 75.0 7.7 72 254-358 20-91 (91)
67 1b3i_A PETE protein, protein ( 98.7 6.4E-09 2.2E-13 79.5 3.4 77 254-358 20-97 (97)
68 4hci_A Cupredoxin 1; structura 98.7 5.8E-08 2E-12 74.6 8.7 72 254-358 29-100 (100)
69 1iby_A Nitrosocyanin; RED copp 98.7 6.4E-08 2.2E-12 76.0 8.6 75 253-359 38-112 (112)
70 1byp_A Protein (plastocyanin); 98.7 4.5E-08 1.5E-12 75.0 6.8 82 254-358 18-99 (99)
71 2q9o_A Laccase-1; multicopper 98.6 1.6E-07 5.3E-12 94.4 12.2 92 253-361 67-159 (559)
72 1kdj_A Plastocyanin; electron 98.6 1.2E-07 4.2E-12 73.0 6.9 84 254-358 18-102 (102)
73 3sqr_A Laccase; multicopper ox 98.5 6.2E-07 2.1E-11 90.0 12.9 86 253-361 98-189 (580)
74 3zx1_A Oxidoreductase, putativ 98.5 1.5E-06 5.2E-11 85.4 14.0 87 253-362 82-174 (481)
75 1hfu_A Laccase 1; oxidoreducta 98.5 4.5E-07 1.5E-11 90.0 10.0 88 253-361 34-130 (503)
76 1zpu_A Iron transport multicop 98.4 9E-07 3.1E-11 88.4 11.4 92 253-361 34-126 (534)
77 2cal_A Rusticyanin; iron respi 98.4 5.2E-07 1.8E-11 74.9 7.4 89 253-358 61-154 (154)
78 1plc_A Plastocyanin; electron 98.4 4.4E-07 1.5E-11 69.4 6.4 82 254-358 18-99 (99)
79 3aw5_A Multicopper oxidase; be 98.3 1.5E-06 5.1E-11 84.9 10.1 87 253-362 38-129 (448)
80 3od3_A Blue copper oxidase CUE 98.3 2.2E-06 7.4E-11 84.3 11.0 86 253-361 48-138 (488)
81 1fwx_A Nitrous oxide reductase 98.3 1.5E-06 5E-11 86.8 9.8 78 253-360 513-593 (595)
82 2ov0_A Amicyanin; beta-sandwic 98.3 3E-06 1E-10 65.5 8.0 72 254-358 34-105 (105)
83 3abg_A Bilirubin oxidase; clea 98.2 6.4E-06 2.2E-10 82.2 11.9 88 252-362 68-160 (534)
84 2wsd_A Spore coat protein A; o 97.9 1.7E-05 5.8E-10 78.8 7.9 92 253-362 58-179 (513)
85 2g23_A PHS, phenoxazinone synt 97.9 5.4E-05 1.9E-09 76.4 10.6 88 10-105 460-574 (612)
86 3tu6_A Pseudoazurin (blue copp 97.8 3.5E-05 1.2E-09 61.5 6.8 75 254-361 24-98 (127)
87 3erx_A Pseudoazurin; copper pr 97.8 7E-05 2.4E-09 59.4 8.4 74 254-360 22-95 (123)
88 3ef4_A Pseudoazurin, blue copp 97.7 7.6E-05 2.6E-09 59.2 7.4 74 254-360 23-96 (124)
89 1iuz_A Plastocyanin; electron 97.7 0.00014 4.7E-09 55.2 8.2 80 254-358 19-98 (98)
90 1id2_A Amicyanin; beta barrel, 97.7 0.00015 5.1E-09 55.9 8.0 72 254-358 35-106 (106)
91 3c75_A Amicyanin; copper prote 97.6 0.00023 8E-09 57.1 8.0 72 254-358 61-132 (132)
92 1paz_A Pseudoazurin precursor; 97.3 0.00088 3E-08 53.0 8.1 74 254-360 22-95 (123)
93 3ay2_A Lipid modified azurin p 97.3 0.00031 1.1E-08 58.5 5.6 90 254-358 59-166 (167)
94 1pmy_A Pseudoazurin; electron 97.3 0.00079 2.7E-08 53.3 7.6 74 254-360 22-95 (123)
95 3sbq_A Nitrous-oxide reductase 97.2 0.001 3.4E-08 65.5 9.4 79 253-359 558-637 (638)
96 2aan_A Auracyanin A; cupredoxi 97.2 0.00056 1.9E-08 55.3 6.2 70 28-105 34-124 (139)
97 1cuo_A Protein (azurin ISO-2); 97.2 0.0021 7.3E-08 51.2 9.2 90 254-358 19-128 (129)
98 2cua_A Protein (CUA); CUA cent 97.0 0.0029 1E-07 50.8 8.2 71 254-358 61-134 (135)
99 2ccw_A Azurin II, AZN-2; elect 96.7 0.0029 1E-07 50.4 6.2 89 254-358 19-128 (129)
100 2ux6_A Pseudoazurin; type-1 co 96.6 0.0067 2.3E-07 47.8 7.5 72 254-360 22-93 (122)
101 3gyr_A PHS, phenoxazinone synt 96.6 0.012 4E-07 59.5 11.2 77 28-105 471-574 (612)
102 1iby_A Nitrosocyanin; RED copp 96.5 0.013 4.3E-07 45.2 8.6 61 28-106 37-97 (112)
103 2iaa_C Azurin; quinoprotein, t 96.5 0.0076 2.6E-07 47.9 7.3 43 315-358 82-127 (128)
104 3s8f_B Cytochrome C oxidase su 96.4 0.013 4.3E-07 48.8 8.2 73 254-358 94-167 (168)
105 1nwp_A Azurin; electron transp 96.3 0.013 4.4E-07 46.5 7.7 96 254-358 19-128 (128)
106 3fsa_A Azurin; copper, cupredo 95.8 0.033 1.1E-06 43.8 7.7 96 254-358 19-125 (125)
107 1qhq_A Protein (auracyanin); e 95.1 0.045 1.5E-06 43.9 6.6 71 28-105 32-123 (140)
108 2ccw_A Azurin II, AZN-2; elect 95.1 0.017 5.9E-07 45.8 4.0 78 28-105 17-113 (129)
109 4hci_A Cupredoxin 1; structura 95.1 0.088 3E-06 39.5 7.7 60 28-105 27-86 (100)
110 1nwp_A Azurin; electron transp 95.0 0.019 6.5E-07 45.5 4.0 78 28-105 17-113 (128)
111 2iaa_C Azurin; quinoprotein, t 94.8 0.15 5.2E-06 40.2 8.8 77 28-104 16-111 (128)
112 3fsa_A Azurin; copper, cupredo 94.8 0.0066 2.3E-07 47.7 0.7 78 28-105 17-113 (125)
113 1cuo_A Protein (azurin ISO-2); 94.7 0.089 3E-06 41.6 7.0 75 28-105 17-113 (129)
114 2cal_A Rusticyanin; iron respi 94.5 0.083 2.8E-06 43.2 6.8 75 28-105 60-138 (154)
115 3cvb_A Plastocyanin; cupredoxi 94.5 0.019 6.3E-07 43.5 2.6 73 28-105 18-90 (105)
116 3ay2_A Lipid modified azurin p 94.4 0.065 2.2E-06 44.4 5.9 75 28-105 57-151 (167)
117 2gim_A Plastocyanin; beta shee 92.7 0.029 9.8E-07 42.6 0.8 67 28-105 19-91 (106)
118 1kdj_A Plastocyanin; electron 91.4 0.13 4.4E-06 38.6 3.1 65 28-105 16-88 (102)
119 1b3i_A PETE protein, protein ( 89.9 0.5 1.7E-05 34.8 5.2 64 28-105 18-83 (97)
120 1fwx_A Nitrous oxide reductase 89.8 1.5 5.1E-05 43.7 9.9 62 28-106 512-575 (595)
121 1bxv_A Plastocyanin; copper pr 89.3 1.3 4.4E-05 31.9 7.1 60 28-105 18-77 (91)
122 2plt_A Plastocyanin; electron 89.3 0.69 2.4E-05 34.0 5.6 68 28-105 17-84 (98)
123 1pcs_A Plastocyanin; electron 87.7 0.53 1.8E-05 34.8 4.0 64 28-105 18-84 (98)
124 1iuz_A Plastocyanin; electron 86.5 0.88 3E-05 33.6 4.7 65 28-105 17-84 (98)
125 3hb3_B Cytochrome C oxidase su 84.1 3 0.0001 37.7 7.7 76 253-360 189-265 (298)
126 2ov0_A Amicyanin; beta-sandwic 82.9 1.9 6.4E-05 32.3 5.1 63 28-106 32-94 (105)
127 1byp_A Protein (plastocyanin); 80.8 0.93 3.2E-05 33.4 2.6 65 28-105 16-85 (99)
128 1plc_A Plastocyanin; electron 80.1 0.89 3E-05 33.6 2.3 68 28-105 16-85 (99)
129 1cyx_A CYOA; electron transpor 79.0 5 0.00017 34.1 6.8 74 253-358 41-115 (205)
130 2r39_A FIXG-related protein; s 78.1 5.1 0.00018 30.6 6.2 47 37-93 33-81 (118)
131 2gsm_B Cytochrome C oxidase su 77.7 6.9 0.00023 34.7 7.7 75 253-359 171-246 (262)
132 3isy_A Bsupi, intracellular pr 75.7 6.3 0.00021 30.4 6.0 72 35-107 16-102 (120)
133 3sbq_A Nitrous-oxide reductase 74.8 30 0.001 34.2 11.9 62 28-106 557-620 (638)
134 2cua_A Protein (CUA); CUA cent 74.4 11 0.00037 29.6 7.3 59 30-107 61-119 (135)
135 3c75_A Amicyanin; copper prote 73.2 6.4 0.00022 30.8 5.7 61 28-105 59-120 (132)
136 1id2_A Amicyanin; beta barrel, 68.4 7.7 0.00026 28.9 5.0 61 28-105 33-94 (106)
137 3erx_A Pseudoazurin; copper pr 66.6 2.5 8.5E-05 32.8 1.9 62 28-107 20-81 (123)
138 3s8f_B Cytochrome C oxidase su 63.6 29 0.00098 28.4 7.9 59 30-107 94-152 (168)
139 1v54_B Cytochrome C oxidase po 62.9 15 0.00052 31.6 6.4 76 252-359 139-215 (227)
140 1fft_B Ubiquinol oxidase; elec 61.2 13 0.00044 33.8 5.8 74 253-358 151-225 (315)
141 1paz_A Pseudoazurin precursor; 54.9 5.5 0.00019 30.8 2.0 60 28-105 20-79 (123)
142 3tu6_A Pseudoazurin (blue copp 47.9 4.5 0.00015 31.6 0.4 60 28-105 22-81 (127)
143 1jer_A Cucumber stellacyanin; 45.5 22 0.00076 28.0 4.1 35 328-362 76-111 (138)
144 4ay0_A Chaperone protein CAF1M 40.1 57 0.002 27.7 6.2 64 28-95 65-129 (218)
145 2wtp_A ORF131 protein, CZCE; m 37.2 12 0.0004 29.2 1.2 24 29-52 71-94 (131)
146 3q48_A Chaperone CUPB2; IG fol 34.5 45 0.0015 29.2 4.8 58 28-95 84-148 (257)
147 1gui_A Laminarinase 16A; carbo 34.3 1.6E+02 0.0054 22.9 7.8 9 39-47 47-55 (155)
148 1x9u_A Umecyanin; cupredoxin, 32.3 36 0.0012 25.9 3.3 33 328-360 73-106 (116)
149 1ws8_A Mavicyanin; oxidized fo 31.4 38 0.0013 25.4 3.3 32 328-359 73-104 (109)
150 2xg5_A PAPD, chaperone protein 30.7 69 0.0024 27.2 5.2 57 28-94 54-118 (218)
151 2r5o_A Putative ATP binding co 30.1 67 0.0023 26.4 5.0 72 32-106 65-145 (188)
152 1iz6_A Initiation factor 5A; S 28.8 1.3E+02 0.0043 23.5 6.1 49 8-63 15-68 (138)
153 2co7_B SAFB chaperone, putativ 27.7 1.3E+02 0.0044 25.5 6.5 20 28-47 63-82 (221)
154 4djm_A DRAB; chaperone, PILI; 27.0 75 0.0026 27.4 4.9 21 28-48 73-93 (239)
155 3pu9_A Protein serine/threonin 26.7 1.4E+02 0.0046 25.4 6.6 31 39-71 108-138 (242)
156 3gfu_C Chaperone protein FAEE; 26.1 43 0.0015 28.7 3.1 21 28-48 53-73 (224)
157 3t91_A Stage II sporulation pr 25.7 1.1E+02 0.0036 25.9 5.7 46 39-86 105-155 (242)
158 1gu3_A Endoglucanase C; carboh 25.6 1.8E+02 0.006 22.9 6.5 27 30-56 51-78 (149)
159 3idu_A Uncharacterized protein 25.2 2.3E+02 0.0078 21.6 9.7 69 32-109 28-99 (127)
160 3p6b_A Cellulose 1,4-beta-cell 25.0 2.6E+02 0.0091 23.2 7.9 17 78-94 141-159 (205)
161 1l4i_A SFAE protein; periplasm 24.7 64 0.0022 27.1 3.9 20 28-47 52-72 (206)
162 3er0_A Eukaryotic translation 23.7 1.6E+02 0.0054 23.8 5.9 48 8-62 39-91 (167)
163 2loj_A Putative cytoplasmic pr 23.2 83 0.0028 21.0 3.3 20 28-47 38-57 (63)
164 1bkb_A Translation initiation 21.6 1.7E+02 0.0059 22.6 5.6 49 8-63 17-70 (136)
165 2jra_A Protein RPA2121; domain 21.2 87 0.003 21.2 3.1 20 28-47 42-61 (67)
166 2p9r_A Alpha-2-M, alpha-2-macr 21.0 70 0.0024 23.1 3.1 68 33-106 13-84 (102)
167 1klf_A FIMC chaperone, chapero 21.0 1.4E+02 0.0047 25.0 5.2 20 28-47 52-72 (205)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.5e-64 Score=510.28 Aligned_cols=349 Identities=29% Similarity=0.477 Sum_probs=263.4
Q ss_pred CCCCeEEEcCCCCCCCCC-------------CCC-----ceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeC
Q 017112 6 NMSDAHTINGKPGPLFPC-------------SEK-----HTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVD 67 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~-------------~~~-----~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~D 67 (377)
..++.+||||+. .++| +.. ..+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+|
T Consensus 165 ~~~~~~liNG~~--~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~D 242 (552)
T 1aoz_A 165 GEPQTILLNGRG--QFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEAD 242 (552)
T ss_dssp CSCSEEEETTBC--CSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEET
T ss_pred CCCCeEEECCcc--ccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEEC
Confidence 357899999997 3444 321 13489999999999999999999999999999999999999
Q ss_pred CCccCceEecEEEeCCCCEEEEEEEe-CCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCC-C-CCCCCCCCCCC
Q 017112 68 AVYTKPFTTEAILIAPGQTTNVLVQA-NQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSL-L-PTLAQLPASND 144 (377)
Q Consensus 68 G~~v~P~~v~~l~l~~GqR~dvlv~~-~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~-~-~~~~~~p~~~~ 144 (377)
|++++|+.+++|.|++||||||+|++ ++.+|+|||++.... +. .......|+|+|.+..... + ...+..|.+++
T Consensus 243 G~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~--~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~ 319 (552)
T 1aoz_A 243 GNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH--PNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDD 319 (552)
T ss_dssp TEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC--CCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTC
T ss_pred CcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC--CCCccEEEEEEECCCCCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999999 455799999998654 21 1345678999998765311 1 11223444444
Q ss_pred hhhHHhhhhhccCCCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccc
Q 017112 145 SEFALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFK 224 (377)
Q Consensus 145 ~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~ 224 (377)
......+ .++.+.... +...+..+++++.+.++.... .....|+|||++|..|..++|.+.+.+++|.|.
T Consensus 320 ~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-------~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~ 389 (552)
T 1aoz_A 320 FDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-------NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFD 389 (552)
T ss_dssp HHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-------TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSC
T ss_pred ccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC-------CCeEEEEECCCccCCCCCCHHHHHhhcCccccc
Confidence 3322221 234433221 233445677888777654321 225579999999999988999888888888777
Q ss_pred cCCCCCCCC-CCCCCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCC---CCCCCeeecCCceEEEEecCCCCCCC
Q 017112 225 ADFPDKPPK-PFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLT---VESHPFHLHGYNFFVVGTGIGNFDPV 300 (377)
Q Consensus 225 ~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~---~~~Hp~HlHg~~f~vl~~g~g~~~~~ 300 (377)
.+++..++. .|+.... ......+.++.++.++.|++|+|+|+|.+.+. ...||||||||+|+||++|.|.|++
T Consensus 390 ~~~p~~~~~~~~~~~~~--~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~- 466 (552)
T 1aoz_A 390 QNPPPEVFPEDYDIDTP--PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA- 466 (552)
T ss_dssp CSCCCSCCCTTCCTTSC--CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCG-
T ss_pred cCCCccccccccccccc--cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCc-
Confidence 666544331 2332211 11112345667899999999999999986443 5679999999999999999888877
Q ss_pred CCCCCCCCCCCCccceeeeCCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeCCCCCCCCCCCCCCCCCCC
Q 017112 301 KYPANYNLVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLPPPTDLPPC 377 (377)
Q Consensus 301 ~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~~~~~~~~c 377 (377)
.++..+|+.||.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.+... ++.++|.+++.|
T Consensus 467 ~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-----~~~~~P~~~~~C 538 (552)
T 1aoz_A 467 EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-----KVGRIPTKALAC 538 (552)
T ss_dssp GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----GCCCCCHHHHSS
T ss_pred ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----hhccCCcchhhh
Confidence 455678999999999999999999999999999999999999999999999999987532 455677778888
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=5.1e-61 Score=481.73 Aligned_cols=310 Identities=28% Similarity=0.433 Sum_probs=231.7
Q ss_pred CCCCCCeEEEcCCCCCCCCCCC---------CceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCce
Q 017112 4 PPNMSDAHTINGKPGPLFPCSE---------KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPF 74 (377)
Q Consensus 4 ~p~~~d~~liNG~~~~~~~~~~---------~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~ 74 (377)
.++.+|++||||+. .++|+. ...+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+
T Consensus 221 ~~~~~d~~liNG~~--~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P~ 298 (580)
T 3sqr_A 221 APPALENTLMNGTN--TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPY 298 (580)
T ss_dssp CCCCBSEEEETTBC--CCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEE
T ss_pred CCCCCceEEECCcc--cCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCce
Confidence 36789999999995 455542 2468999999999999999999999999999999999999999999999
Q ss_pred EecEEEeCCCCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChh-hHHhhhh
Q 017112 75 TTEAILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE-FALNYNK 153 (377)
Q Consensus 75 ~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~-~~~~~~~ 153 (377)
.+++|.|++||||||||++++.+|+||||+.....|..........|||+|.+.....+. .+.++... ...+...
T Consensus 299 ~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~----~~~~~~~~~~~~~~~~ 374 (580)
T 3sqr_A 299 TTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPT----SVGTTPRGTCEDEPVA 374 (580)
T ss_dssp EESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCC----CCCCCCCCCSCCSCGG
T ss_pred EeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCC----CCCCCccchhhccccc
Confidence 999999999999999999998889999999876655322334468999999865422221 11111110 0000012
Q ss_pred hccCCCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeec-CchhhhhhhhcccCcccccCCCCCCC
Q 017112 154 KLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVM-PQTALLQAHYFNLKGVFKADFPDKPP 232 (377)
Q Consensus 154 ~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~-p~~~l~~~~~~~~~~~~~~~~~~~~p 232 (377)
.|.++.+. .++...+.++.+.++ .+....|++||++|.. +..|+|...+. |. .+++
T Consensus 375 ~L~P~~~~----~~~~~~~~~~~l~~~----------~~~~~~w~iN~~s~~~~~~~P~L~~~~~---g~--~~~~---- 431 (580)
T 3sqr_A 375 SLVPHLAL----DVGGYSLVDEQVSSA----------FTNYFTWTINSSSLLLDWSSPTTLKIFN---NE--TIFP---- 431 (580)
T ss_dssp GCCBSSCC----BCCSEEEEEEEEEEE----------ESSSEEEEETTBCCCCCTTSCHHHHHHT---TC--CCCC----
T ss_pred ccccCCCC----CCCCccceEEEEEec----------cCCceeEEECCEecccCCCCCchhhhhc---CC--ccCC----
Confidence 34443222 222233444444442 2345679999999975 45566544332 10 1111
Q ss_pred CCCCCCCCCCCCccCcCCceeeeee----ccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCC
Q 017112 233 KPFNYTGAPLTASLGTSRATRLSKI----AFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNL 308 (377)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~ 308 (377)
....++.+ +.|++|+|+|+|.+.. ...||||||||+|+||++|.|.|++...+..+|+
T Consensus 432 -----------------~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl 493 (580)
T 3sqr_A 432 -----------------TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNL 493 (580)
T ss_dssp -----------------GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCC
T ss_pred -----------------CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeEecCceEEEEecCCCccCcccccccccc
Confidence 11223344 4699999999997532 4689999999999999999999998777788999
Q ss_pred CCCCccceeeeCCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeCC
Q 017112 309 VDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 309 ~np~~rDtv~v~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
.||++|||+.|++++|++|||++||||.|+|||||+||++.||+++|.+.+.
T Consensus 494 ~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 494 VNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp BSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred CCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 9999999999999999999999999999999999999999999999997543
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.1e-59 Score=466.56 Aligned_cols=306 Identities=30% Similarity=0.467 Sum_probs=225.7
Q ss_pred CCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCC
Q 017112 4 PPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAP 83 (377)
Q Consensus 4 ~p~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~ 83 (377)
.|..+|++||||+. .+..|.....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++
T Consensus 162 ~p~~~d~~liNG~~-~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~p 240 (499)
T 3pxl_A 162 FPGGADATLINGKG-RAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFA 240 (499)
T ss_dssp SCSSCSEEEETTBC-CCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECT
T ss_pred CCCCCcEEEECCCC-cCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECC
Confidence 35689999999984 33334445678999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKF 163 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~ 163 (377)
||||||||++++.+|+|||++.+...+. ........|+|+|++.....+. .+..+..... ....|+++.....
T Consensus 241 GqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~-~~~~~~~~~~-----~~~~L~p~~~~~~ 313 (499)
T 3pxl_A 241 AQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAVEPT-TNQTTSVKPL-----NEVDLHPLVSTPV 313 (499)
T ss_dssp TCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCC-CCCCCCSSBC-----CGGGCCBSSCCCC
T ss_pred CcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCCCCC-CCCCCCCccc-----ccccccccccccC
Confidence 9999999999987799999998654332 1122235799999875432221 1111111100 0123555544333
Q ss_pred CCC-CCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCC
Q 017112 164 PAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPL 242 (377)
Q Consensus 164 p~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 242 (377)
|.. .+..+++++.+.+++. +. .|+|||++|..|..|+|.+... |....
T Consensus 314 p~~~~~~~~d~~~~l~~~~~---------~~--~w~iNg~s~~~~~~P~L~~~~~---g~~~~----------------- 362 (499)
T 3pxl_A 314 PGAPSSGGVDKAINMAFNFN---------GS--NFFINGASFVPPTVPVLLQILS---GAQTA----------------- 362 (499)
T ss_dssp SSCSSTTCSSEEEECCEEEC---------SS--CEEETTBCCCCCSSCHHHHHHT---TCCST-----------------
T ss_pred CCcccCCCCcEEEEEEEEec---------Cc--EEEEcCEecCCCCCchhhhhhc---CCccc-----------------
Confidence 322 2234666666655431 11 5899999999888866544332 11000
Q ss_pred CCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCC-
Q 017112 243 TASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT- 321 (377)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~- 321 (377)
.. ......++.++.|++|+|+|+|..+.....||||||||+|+|++.+. ...+|+.||.||||+.|++
T Consensus 363 -~~--~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g--------~~~~n~~~P~~rDtv~v~~~ 431 (499)
T 3pxl_A 363 -QD--LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG--------STVYNYDNPIFRDVVSTGTP 431 (499)
T ss_dssp -TT--SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT--------CCCCCSSSCCEESEEECCCG
T ss_pred -cc--cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC--------CcccccCCCCccceEEcCCc
Confidence 00 01223578899999999999954333467899999999999998642 2357889999999999987
Q ss_pred --CCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeC
Q 017112 322 --GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVED 359 (377)
Q Consensus 322 --~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~ 359 (377)
++|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 432 ~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (499)
T 3pxl_A 432 AAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDT 471 (499)
T ss_dssp GGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESG
T ss_pred CCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEECh
Confidence 99999999999999999999999999999999997543
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=5e-58 Score=454.72 Aligned_cols=304 Identities=28% Similarity=0.451 Sum_probs=222.5
Q ss_pred CCCCCCeEEEcCCCCCCCCCC--CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEe
Q 017112 4 PPNMSDAHTINGKPGPLFPCS--EKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILI 81 (377)
Q Consensus 4 ~p~~~d~~liNG~~~~~~~~~--~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l 81 (377)
.|..+|++||||+. . +.|. ....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|
T Consensus 164 ~p~~~d~~liNG~g-~-~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i 241 (495)
T 3t6v_A 164 GAITADSTLIDGLG-R-THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQI 241 (495)
T ss_dssp SCCCCSEEEETTBC-C-BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEE
T ss_pred CCCCCcEEEECCcC-c-CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEE
Confidence 35689999999994 2 3333 245689999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCC
Q 017112 82 APGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSP 161 (377)
Q Consensus 82 ~~GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~ 161 (377)
++||||||||++++.+|+|||++.+...+. ........|+|+|++.....+.. +. +....... ....|+++...
T Consensus 242 ~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~~p~~-~~-~~~~~~~~---~~~~L~p~~~~ 315 (495)
T 3t6v_A 242 FAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTADPVT-VA-STVHTKCL---IETDLHPLSRN 315 (495)
T ss_dssp CTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSSCCCC-CC-CSSCSSBC---CGGGCCBSSCC
T ss_pred cCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCCCCCC-CC-CCCCcccc---ccccccccccc
Confidence 999999999999987899999998654332 11222357999998754322211 11 11000000 01235555433
Q ss_pred CCCCC-CCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCC
Q 017112 162 KFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGA 240 (377)
Q Consensus 162 ~~p~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 240 (377)
..|.. .+..+++++.+.++.. +. .|+|||++|..|..|+|.+... |.+..
T Consensus 316 ~~p~~~~~~~~d~~~~l~~~~~---------~~--~w~iNg~s~~~~~~P~L~~~~~---g~~~~--------------- 366 (495)
T 3t6v_A 316 GVPGNPHQGGADCNLNLSLGFA---------CG--NFVINGVSFTPPTVPVLLQICS---GANTA--------------- 366 (495)
T ss_dssp CCSSCSSTTCSSEEEECCEEEE---------TT--EEEETTBCCCCCSSCHHHHHHT---TCCSS---------------
T ss_pred cCCCccCCCCCcEEEEEEEEec---------Cc--EEEEcCEecCCCCCcchhhhhc---CCcCc---------------
Confidence 33321 2234566666554431 22 5899999999888866544322 11100
Q ss_pred CCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeC
Q 017112 241 PLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVP 320 (377)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~ 320 (377)
.. ......++.++.|++|+|+|+|.. ....||||||||+|+|++.+. ...+|+.||.||||+.|+
T Consensus 367 ---~~--~~~~~~v~~~~~g~~V~ivl~~n~--~~~~HP~HLHGh~F~vl~~~g--------~~~~n~~~P~~rDtv~v~ 431 (495)
T 3t6v_A 367 ---AD--LLPSGSVISLPSNSTIEIALPAGA--AGGPHPFHLHGHDFAVSESAS--------NSTSNYDDPIWRDVVSIG 431 (495)
T ss_dssp ---TT--SSSTTSEEEECTTCEEEEEEECCS--SSCCCEEEETTCCEEEEECTT--------CCCCCSSSCCEESEEECC
T ss_pred ---cc--ccCCcceEEecCCCEEEEEEccCC--CCCCcceeecCCcEEEEecCC--------CCCcccCCCCCccEEEcC
Confidence 00 012235788999999999998422 367899999999999998642 235788999999999999
Q ss_pred C-CCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeC
Q 017112 321 T-GGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVED 359 (377)
Q Consensus 321 ~-~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~ 359 (377)
+ |+|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 432 ~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 432 GVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp STTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred CCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 7 89999999999999999999999999999999997543
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-58 Score=464.42 Aligned_cols=304 Identities=26% Similarity=0.366 Sum_probs=221.8
Q ss_pred CCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCC
Q 017112 4 PPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAP 83 (377)
Q Consensus 4 ~p~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~ 83 (377)
.++.+|.+||||+. .++++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++
T Consensus 163 ~~~~~d~~liNG~~----------~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~ 232 (534)
T 1zpu_A 163 AEPIPQNLIVNNTM----------NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITV 232 (534)
T ss_dssp CCCCCSEEEETTBS----------SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECT
T ss_pred CCCCCceEEECCCC----------ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEeceEEECc
Confidence 35679999999996 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEEEeCCC-CCceeEEeeccCCCC--C-CCCCcceEEEEEEcCCCCCCCCC-CCCCCC-CCChhhHHhhhhhccC
Q 017112 84 GQTTNVLVQANQK-PGRYFMAARPFNDAP--I-PVDNKTATGILQYKGIPNSLLPT-LAQLPA-SNDSEFALNYNKKLRS 157 (377)
Q Consensus 84 GqR~dvlv~~~~~-~g~y~l~~~~~~~~~--~-~~~~~~~~ail~y~~~~~~~~~~-~~~~p~-~~~~~~~~~~~~~l~~ 157 (377)
||||||||++++. .++|||++.....+. . ........++|+|.+......+. ....+. +++ ..+++
T Consensus 233 gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~--------~~l~p 304 (534)
T 1zpu_A 233 AQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDD--------FYLQP 304 (534)
T ss_dssp TCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCG--------GGCCB
T ss_pred cceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCccccccccccc--------cccee
Confidence 9999999999864 479999987543221 1 12245678999998653221110 111111 111 12333
Q ss_pred CCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCC
Q 017112 158 LNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNY 237 (377)
Q Consensus 158 l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 237 (377)
+... .++..+++++.+.+.+... .++ ...|+|||++|..|.+++|...... +.+ ...
T Consensus 305 ~~~~----~~~~~~~~~~~l~~~~~~~-----~~~-~~~~~iNg~s~~~~~~P~L~~~~~~--~~~----~~~------- 361 (534)
T 1zpu_A 305 YEKE----AIYGEPDHVITVDVVMDNL-----KNG-VNYAFFNNITYTAPKVPTLMTVLSS--GDQ----ANN------- 361 (534)
T ss_dssp SSCC----CCCCSCSEEEEEEEEEEEC-----TTS-CEEEEETTBCCCCCSSCHHHHHTTS--GGG----TTC-------
T ss_pred CCCC----CCCCCCCeEEEEEEEeecc-----CCc-eeEEEECCCcccCCCCCceeeeccc--Ccc----cCC-------
Confidence 3222 1223457777776654211 012 3358999999999888655433221 110 000
Q ss_pred CCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCC----------CCCCCCCCCCCC
Q 017112 238 TGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG----------NFDPVKYPANYN 307 (377)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g----------~~~~~~~~~~~~ 307 (377)
+. ....++..+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+ .|++.. +. ..
T Consensus 362 -----~~--~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~-~~-~~ 429 (534)
T 1zpu_A 362 -----SE--IYGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDN-HP-AF 429 (534)
T ss_dssp -----GG--GGCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTB-CC-CC
T ss_pred -----Cc--ccCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCccccccCcccccCccc-cc-cc
Confidence 00 1122345788999999999999975 568999999999999999864 333321 11 22
Q ss_pred CCCCCccceeeeCCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeCC
Q 017112 308 LVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 308 ~~np~~rDtv~v~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
..+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.+.+.
T Consensus 430 ~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 430 PEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp CSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred cCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 56899999999999999999999999999999999999999999999988643
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.3e-58 Score=461.53 Aligned_cols=315 Identities=32% Similarity=0.485 Sum_probs=226.8
Q ss_pred CCCCCeEEEcCCCCCCCCCC--CCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeC
Q 017112 5 PNMSDAHTINGKPGPLFPCS--EKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIA 82 (377)
Q Consensus 5 p~~~d~~liNG~~~~~~~~~--~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~ 82 (377)
.+.+|.+||||+. .+.|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|+
T Consensus 188 ~~~~d~~liNG~~--~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~ 265 (521)
T 1v10_A 188 PPAPDTTLINGLG--RNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIF 265 (521)
T ss_dssp CSCCSEEEETTBC--CCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEEC
T ss_pred CCCCCEEEECCcc--cCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEc
Confidence 4569999999996 35664 2345899999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCC-CCCCCChhhHHhhhhhccCCCCC
Q 017112 83 PGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQ-LPASNDSEFALNYNKKLRSLNSP 161 (377)
Q Consensus 83 ~GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~l~~l~~~ 161 (377)
+||||||+|++++.+|+|||++.....+. ........++|+|.+.....+..... ...+++ ..|+++...
T Consensus 266 pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~~~--------~~l~p~~~~ 336 (521)
T 1v10_A 266 AGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVAEPTTSQNSGTALNE--------ANLIPLINP 336 (521)
T ss_dssp TTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSCCCCCCCCCSCBCCG--------GGCCBSSCC
T ss_pred ccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCCCCCCCCCcccccch--------hhcccCCcc
Confidence 99999999999987799999998654321 11112236899998754322211100 000110 234444333
Q ss_pred CCCCC-CCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCC
Q 017112 162 KFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGA 240 (377)
Q Consensus 162 ~~p~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 240 (377)
..|.. .+...++++.+..+. ++....|+|||++|..+..++|.+... |...
T Consensus 337 ~~p~~~~~~~~~~~~~l~~~~---------~~~~~~~~iNg~~~~~~~~P~l~~~~~---g~~~---------------- 388 (521)
T 1v10_A 337 GAPGNPVPGGADINLNLRIGR---------NATTADFTINGAPFIPPTVPVLLQILS---GVTN---------------- 388 (521)
T ss_dssp CCSSCSSTTCSSEEEECCEEC---------CSSSSCCEESSCCCCCCSSCHHHHHHH---TCCC----------------
T ss_pred cCCCcccCCcceEEEEEEEec---------CCceeEEEECCCcccCCCCchhhhhhc---CCcc----------------
Confidence 22221 112334444443322 122235899999999887765544332 1100
Q ss_pred CCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeee-
Q 017112 241 PLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV- 319 (377)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v- 319 (377)
.. ....+..++.++.|++|||+++| .+.||||||||+|||++++.+. .+++.+|.|||||.|
T Consensus 389 --~~--~~~~~~~~~~v~~g~~vei~l~N-----~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~ 451 (521)
T 1v10_A 389 --PN--DLLPGGAVISLPANQVIEISIPG-----GGNHPFHLHGHNFDVVRTPGSS--------VYNYVNPVRRDVVSIG 451 (521)
T ss_dssp --GG--GSSSTTTEEEECTTCEEEEEEEC-----CBSCEEEESSCCEEEEECTTCS--------CCCCSSCCEESEEECC
T ss_pred --cc--cCCCCceEEEecCCCEEEEEEcC-----CCCCCEEEccceEEEEecCCCC--------ccccCCCCeeeeEEeC
Confidence 00 01223467889999999999999 2489999999999999997542 367889999999999
Q ss_pred CCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeCCCCCCCCCCC-CCCCCCCC
Q 017112 320 PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPDQSVLP-PPTDLPPC 377 (377)
Q Consensus 320 ~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~~~~~~~~-~~~~~~~c 377 (377)
++++|++|||++||||.|+|||||+||++.|||++|.|.+... .++.+ |+...+.|
T Consensus 452 p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 508 (521)
T 1v10_A 452 GGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPAWDDLC 508 (521)
T ss_dssp BSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHHHHTHH
T ss_pred CCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChHHhhhc
Confidence 8999999999999999999999999999999999999865432 23333 33445555
No 7
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=8.6e-57 Score=448.62 Aligned_cols=303 Identities=31% Similarity=0.512 Sum_probs=220.4
Q ss_pred CCCCeEEEcCCCCCCCCCCC-CceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCC
Q 017112 6 NMSDAHTINGKPGPLFPCSE-KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPG 84 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~-~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~G 84 (377)
+.+|.+||||+. .+.|.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++++|+.+++|.|++|
T Consensus 163 ~~~d~~liNG~~--~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pg 240 (503)
T 1hfu_A 163 AQPDATLINGKG--RYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTG 240 (503)
T ss_dssp -CCSEEEETTBC--CBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTT
T ss_pred CCCCEEEECccc--ccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCeEEEccc
Confidence 468999999996 466753 34589999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEeCCCCCceeEEeeccCCCCC---CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCC
Q 017112 85 QTTNVLVQANQKPGRYFMAARPFNDAPI---PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSP 161 (377)
Q Consensus 85 qR~dvlv~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~ 161 (377)
|||||+|++++.+|+|||++.....+.. ........++|+|.+.....+. .+..|...... ...|+++...
T Consensus 241 eR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~-~~~~~~~~~l~-----~~~l~p~~~~ 314 (503)
T 1hfu_A 241 QRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPT-TSANPNPAQLN-----EADLHALIDP 314 (503)
T ss_dssp CEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCC-CCCCSSCCBCC-----GGGCBBSSSC
T ss_pred ceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCC-CCCCCccCCCc-----cccccccCcc
Confidence 9999999999877999999976532211 0112234689999875432111 11111111100 0234444333
Q ss_pred CCCCC-CCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCC
Q 017112 162 KFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGA 240 (377)
Q Consensus 162 ~~p~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 240 (377)
..|.. .+...+.++.+..+. ++. .|+|||++|..+..++|.+... |...
T Consensus 315 ~~p~~~~~~~~~~~~~l~~~~---------~~~--~~~iNg~~~~~~~~P~l~~~~~---g~~~---------------- 364 (503)
T 1hfu_A 315 AAPGIPTPGAADVNLRFQLGF---------SGG--RFTINGTAYESPSVPTLLQIMS---GAQS---------------- 364 (503)
T ss_dssp SCSSCSSTTCSSEEEECCEEE---------ETT--EEEETTBCCCCCSSCHHHHHHT---TCCS----------------
T ss_pred CCCCcccCCcceEEEEEEeec---------cCc--eEEECCCccCCCCCcchhhhhc---CCcc----------------
Confidence 23221 112334444333221 122 5899999999887766544331 1100
Q ss_pred CCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeee-
Q 017112 241 PLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAV- 319 (377)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v- 319 (377)
... ...+..++.++.|++|||+++|.. ..+.||||||||+|+|++++.+. .+++.+|.|||||.|
T Consensus 365 --~~~--~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~--------~~n~~~p~~rDTV~V~ 430 (503)
T 1hfu_A 365 --AND--LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS--------TYNFVNPVKRDVVSLG 430 (503)
T ss_dssp --GGG--SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC--------CCCCSSBCEESEEECC
T ss_pred --ccc--CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC--------ccccCCCCeeeeEEec
Confidence 000 122356789999999999999643 25689999999999999997542 367889999999999
Q ss_pred CCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeCC
Q 017112 320 PTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 320 ~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 431 ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~ 471 (503)
T 1hfu_A 431 VTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMA 471 (503)
T ss_dssp STTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHH
T ss_pred CCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECch
Confidence 89999999999999999999999999999999999998643
No 8
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.5e-56 Score=451.71 Aligned_cols=316 Identities=23% Similarity=0.411 Sum_probs=221.4
Q ss_pred CCCCCCeEEEcCCCCCCCCCCC-CceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeC
Q 017112 4 PPNMSDAHTINGKPGPLFPCSE-KHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIA 82 (377)
Q Consensus 4 ~p~~~d~~liNG~~~~~~~~~~-~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~ 82 (377)
.++.+|.+||||+.. ..|.. +..+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|+
T Consensus 191 ~~~~~d~~liNG~~~--~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~ 268 (559)
T 2q9o_A 191 APPFSDNVLINGTAV--NPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLA 268 (559)
T ss_dssp CCCCBSEEEETTBCB--CTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEEC
T ss_pred CCCccceeEECCccc--cCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEc
Confidence 456799999999963 34643 346799999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEEeCCCCCceeEEeec--cCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCC
Q 017112 83 PGQTTNVLVQANQKPGRYFMAARP--FNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNS 160 (377)
Q Consensus 83 ~GqR~dvlv~~~~~~g~y~l~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~ 160 (377)
+||||||+|++++.+|+|||++.. ...+.. .......++|+|.+.....+. ....+..+. ....+ ..|.++..
T Consensus 269 pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~-~~~~~~~ail~y~~~~~~~P~-~~~~~~~~~-~~~~~--~~l~p~~~ 343 (559)
T 2q9o_A 269 VGQRYDVVIDASRAPDNYWFNVTFGGQAACGG-SLNPHPAAIFHYAGAPGGLPT-DEGTPPVDH-QCLDT--LDVRPVVP 343 (559)
T ss_dssp TTCEEEEEEECCSCSSEEEEEEECCGGGTTCC-BSSSCCEEEEEETTSCCSCCC-CCCCCCCCC-TTCCC--SCCCBSSC
T ss_pred cEEEEEEEEECCCCCCcEEEEEEeccccccCC-CCCCceeEEEEECCCCCCCCC-CCCCcCCCc-ccccc--cccccCCC
Confidence 999999999999877899999987 333321 123346899999865432111 111111110 00000 12222221
Q ss_pred CCCCCC-CCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecC-chhhhhhhhcccCcccccCCCCCCCCCCCCC
Q 017112 161 PKFPAD-VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMP-QTALLQAHYFNLKGVFKADFPDKPPKPFNYT 238 (377)
Q Consensus 161 ~~~p~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p-~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~ 238 (377)
...|.. .....+.++.+..... ......|+|||++|..+ ..++|...+.+.. ++
T Consensus 344 ~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~-----~~----------- 399 (559)
T 2q9o_A 344 RSVPVNSFVKRPDNTLPVALDLT--------GTPLFVWKVNGSDINVDWGKPIIDYILTGNT-----SY----------- 399 (559)
T ss_dssp CBCCCTTCCCCGGGEEEEEEECS--------SSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-----CC-----------
T ss_pred CCCCCcccccceeEEEEEEeecC--------CCceEEEEECCEecccCCCCCcHhHhhcCCc-----cC-----------
Confidence 111111 1111233444433211 12345699999999765 3465544332110 00
Q ss_pred CCCCCCccCcCCceeeeeecc-CceEEEEEeecCCC-CCCCCCeeecCCceEEEEecC---------CCCCCCCCCCCCC
Q 017112 239 GAPLTASLGTSRATRLSKIAF-NSTIELVLQDTNLL-TVESHPFHLHGYNFFVVGTGI---------GNFDPVKYPANYN 307 (377)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~-g~~v~~~l~n~~~~-~~~~Hp~HlHg~~f~vl~~g~---------g~~~~~~~~~~~~ 307 (377)
..+..++.++. +++++|+++|.... ..+.||||||||+||||+++. |.|++..++..++
T Consensus 400 ----------~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n 469 (559)
T 2q9o_A 400 ----------PVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLN 469 (559)
T ss_dssp ----------CGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCC
T ss_pred ----------CCCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccc
Confidence 11234566665 56777888885310 146899999999999999987 6665433345688
Q ss_pred CCCCCccceeeeCCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEeCC
Q 017112 308 LVDPIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 308 ~~np~~rDtv~v~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
+.+|.|||||.|++++|++|||++||||.|||||||+||++.|||++|+|..+
T Consensus 470 ~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 470 GDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp CBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred cCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 99999999999999999999999999999999999999999999999998643
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1.3e-52 Score=412.32 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=195.1
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc-CceEecEEEeCCC
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTEAILIAPG 84 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v-~P~~v~~l~l~~G 84 (377)
..++.++|||+. .+.++|++| +|||||||+|+.+.+.|+|+||+|+|||+||+++ +|+.+++|.|+||
T Consensus 175 ~~~~~~~iNG~~----------~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pg 243 (439)
T 2xu9_A 175 KEGDLVLVNGAL----------RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPG 243 (439)
T ss_dssp CCCSEEEETTEE----------SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTT
T ss_pred CCCCEEEECCcc----------CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCc
Confidence 357999999996 589999999 9999999999999999999999999999999998 8999999999999
Q ss_pred CEEEEEEEeCCCCCceeEEeeccCCCCC--------------CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHh
Q 017112 85 QTTNVLVQANQKPGRYFMAARPFNDAPI--------------PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALN 150 (377)
Q Consensus 85 qR~dvlv~~~~~~g~y~l~~~~~~~~~~--------------~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~ 150 (377)
|||||+|++++ +|+|||++.....+.. ........++++|.+..... ..|.
T Consensus 244 eR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~p~--------- 308 (439)
T 2xu9_A 244 ERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKPL-----PLPK--------- 308 (439)
T ss_dssp CEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCCC-----CCCS---------
T ss_pred eeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCccc-----cCcc---------
Confidence 99999999998 7999999875543211 01123567889997643211 1111
Q ss_pred hhhhccCCCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCC
Q 017112 151 YNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDK 230 (377)
Q Consensus 151 ~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~ 230 (377)
.+.++.+ ++ .+ ..++++.+..+. . + ..|+|||++|..+
T Consensus 309 ---~l~~~~~--l~--~~-~~~r~~~l~~~~--~-------g--~~~~iNg~~~~~~----------------------- 346 (439)
T 2xu9_A 309 ---ALSPFPT--LP--AP-VVTRRLVLTEDM--M-------A--ARFFINGQVFDHR----------------------- 346 (439)
T ss_dssp ---CCCCCCC--CC--CC-SEEEEEEEEEEG--G-------G--TEEEETTBCCCTT-----------------------
T ss_pred ---cCCCccc--CC--CC-CcceEEEEEeec--c-------C--ceEeECCEECCCC-----------------------
Confidence 0111111 11 11 123666665543 0 1 2488999988321
Q ss_pred CCCCCCCCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCC
Q 017112 231 PPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVD 310 (377)
Q Consensus 231 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~n 310 (377)
...+.++.|++++|+|+|.+ .+.||||||||+|||++++.+. ..+
T Consensus 347 ---------------------~~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~g~~-----------~~~ 391 (439)
T 2xu9_A 347 ---------------------RVDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVGGRP-----------FPY 391 (439)
T ss_dssp ---------------------CCCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEETTEE-----------CSS
T ss_pred ---------------------CCceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeCCCC-----------CCC
Confidence 11267889999999999975 5689999999999999987443 237
Q ss_pred CCccceeeeCCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEE
Q 017112 311 PIERNTAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAV 357 (377)
Q Consensus 311 p~~rDtv~v~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v 357 (377)
|.|||||.|+++++++|||++||||.|+|||||+||++.|||++|+|
T Consensus 392 p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~V 438 (439)
T 2xu9_A 392 RAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEV 438 (439)
T ss_dssp CCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEE
T ss_pred CCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEe
Confidence 89999999999999999999999999999999999999999999987
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=2.3e-51 Score=410.88 Aligned_cols=267 Identities=19% Similarity=0.273 Sum_probs=193.5
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcC-------ceEEEEEeCCCcc-CceEec
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAG-------HNFTVVEVDAVYT-KPFTTE 77 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idg-------h~~~VIa~DG~~v-~P~~v~ 77 (377)
..+|.+||||+. .+.+.|++ ++|||||||+|+.+.|.|+|++ |+|+|||+||+++ +|+.++
T Consensus 199 ~~gd~~lvNG~~----------~p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~DG~~~~~P~~~~ 267 (534)
T 3abg_A 199 FWGDVIHVNGQP----------WPFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASDSGLLEHPADTS 267 (534)
T ss_dssp CCCSEEEETTEE----------SCBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEETTEEEEEEEEES
T ss_pred ccCceeccCCcc----------CceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeCCCcccCceEec
Confidence 458999999997 57899998 5999999999999999999987 9999999999865 999999
Q ss_pred EEEeCCCCEEEEEEEeCCCCC-ceeEEeeccCC-CCC-CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhh
Q 017112 78 AILIAPGQTTNVLVQANQKPG-RYFMAARPFND-API-PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKK 154 (377)
Q Consensus 78 ~l~l~~GqR~dvlv~~~~~~g-~y~l~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 154 (377)
+|.|++||||||||++++.+| +|+|++..... +.. ........++++|..............| ..
T Consensus 268 ~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P------------~~ 335 (534)
T 3abg_A 268 LLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP------------AN 335 (534)
T ss_dssp CEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC------------CC
T ss_pred eEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc------------cc
Confidence 999999999999999998666 69999854221 110 0111234578888754321110000111 01
Q ss_pred ccCCCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCC
Q 017112 155 LRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKP 234 (377)
Q Consensus 155 l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~ 234 (377)
|.++. .|. .+...++++.+. .. ...|+|||++|..+..
T Consensus 336 L~~~~---~p~-~~~~~~~~~~~~--~~-----------~~~w~iNG~~f~~~~~------------------------- 373 (534)
T 3abg_A 336 LRDVP---FPS-PTTNTPRQFRFG--RT-----------GPTWTINGVAFADVQN------------------------- 373 (534)
T ss_dssp CCCCS---CCC-CCCCCCEEEECS--CC-----------CSTTCCCCBTTBCTTS-------------------------
T ss_pred cccCC---CCC-CccccceEEEEe--cc-----------CceeEECCcccCCCCC-------------------------
Confidence 22211 111 112234444332 11 1248899998843210
Q ss_pred CCCCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 017112 235 FNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIER 314 (377)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~r 314 (377)
.....++.|++++|+|+|.+ ..+.||||||||+|||++++.|.+.. ..+++++ .||
T Consensus 374 -----------------p~l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~~~g~~~~----~~~~~~~-~~r 429 (534)
T 3abg_A 374 -----------------RLLANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISRTSGNNAR----TVMPYES-GLK 429 (534)
T ss_dssp -----------------CCCCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEESSCCSSS----CCCSGGG-SCB
T ss_pred -----------------cceeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEEcCCCCcC----cCCcccc-CCc
Confidence 01245788999999999975 24589999999999999996553321 1245566 899
Q ss_pred ceeeeCCCCEEEEEEE-cCCceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 315 NTAAVPTGGWTAIRFR-ADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 315 Dtv~v~~~~~~~i~~~-~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
|||.|+++++++|||+ +||||.|+|||||++|++.|||+.|.|...+
T Consensus 430 DTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 430 DVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp SEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9999999999999999 8999999999999999999999999998765
No 11
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.1e-50 Score=403.51 Aligned_cols=271 Identities=18% Similarity=0.201 Sum_probs=189.2
Q ss_pred CCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc-eEEEEEeCCCcc-CceEecEEEeC
Q 017112 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGH-NFTVVEVDAVYT-KPFTTEAILIA 82 (377)
Q Consensus 5 p~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh-~~~VIa~DG~~v-~P~~v~~l~l~ 82 (377)
...+|.+||||+. .+.++|+++ +|||||||+|+.+.++|+|++| +|+|||+||+++ +|+.+++|.|+
T Consensus 227 ~~~~d~~liNG~~----------~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~ 295 (513)
T 2wsd_A 227 AFCGETILVNGKV----------WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLA 295 (513)
T ss_dssp CCCCSEEEETTEE----------SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEEC
T ss_pred ccccceEEECCcc----------cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEEC
Confidence 4568999999997 578999985 8999999999999999999999 999999999999 89999999999
Q ss_pred CCCEEEEEEEeCCCCCc-eeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCC
Q 017112 83 PGQTTNVLVQANQKPGR-YFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSP 161 (377)
Q Consensus 83 ~GqR~dvlv~~~~~~g~-y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~ 161 (377)
+||||||||++++.+|+ +.++... .+..........++++|........+.....|.. |..+..
T Consensus 296 pgeR~dvlv~~~~~~g~~~~l~~~~--~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~------------l~~~~~- 360 (513)
T 2wsd_A 296 PAERYDIIIDFTAYEGESIILANSA--GCGGDVNPETDANIMQFRVTKPLAQKDESRKPKY------------LASYPS- 360 (513)
T ss_dssp TTCEEEEEEECGGGTTCEEEEEECC--CSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSB------------CSCCGG-
T ss_pred CeeeEEEEEECCCCCCcEEEEEecc--cccccCCCCCCcceEEEEeccCcccCccCCCCcc------------ccCCCC-
Confidence 99999999999886676 3343322 2211111223357888875432111111111210 111000
Q ss_pred CCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCC
Q 017112 162 KFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAP 241 (377)
Q Consensus 162 ~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 241 (377)
.+ ..+...++++.+...... .+...|+|||++|..|
T Consensus 361 -~~-~~~~~~~~~~~l~~~~~~--------~g~~~~~iNg~~~~~~---------------------------------- 396 (513)
T 2wsd_A 361 -VQ-HERIQNIRTLKLAGTQDE--------YGRPVLLLNNKRWHDP---------------------------------- 396 (513)
T ss_dssp -GC-CCCEEEEEEEEEEEEECT--------TSCEEEEETTBCTTSC----------------------------------
T ss_pred -cc-cCCCcceEEEEEEeecCC--------CCCceEeECCccCCCc----------------------------------
Confidence 00 011123455555443221 1223577999887211
Q ss_pred CCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCC---CCCCCC------CCCCCCCCCCC
Q 017112 242 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIG---NFDPVK------YPANYNLVDPI 312 (377)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g---~~~~~~------~~~~~~~~np~ 312 (377)
..+.++.|++|+|+|+|.+ .+.||||||||.|||++++.+ .|++.. .+......++.
T Consensus 397 -----------~~~~~~~g~~~~w~l~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
T 2wsd_A 397 -----------VTETPKVGTTEIWSIINPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKG 462 (513)
T ss_dssp -----------CCBCCBTTCEEEEEEEECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSS
T ss_pred -----------ccEecCCCCEEEEEEEcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccC
Confidence 1245678999999999975 468999999999999998742 121100 00011223456
Q ss_pred ccceeeeCCCCEEEEEEEc-CCceeeEeeechHHHHhccceeEEEEeC
Q 017112 313 ERNTAAVPTGGWTAIRFRA-DNPGVWFMHCHLELHTGWGLKTAFAVED 359 (377)
Q Consensus 313 ~rDtv~v~~~~~~~i~~~~-d~pG~w~~HCHi~~H~~~Gm~~~~~v~~ 359 (377)
|||||.|+++++++|+|++ ||||.|+|||||+||++.|||+.|+|.+
T Consensus 463 ~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 463 WKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp CBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred cccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 9999999999999999998 8999999999999999999999999975
No 12
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=4.6e-50 Score=394.74 Aligned_cols=253 Identities=17% Similarity=0.167 Sum_probs=188.9
Q ss_pred CCCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEE-cCceEEEEEeCCCcc-CceEecEEEe
Q 017112 4 PPNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAI-AGHNFTVVEVDAVYT-KPFTTEAILI 81 (377)
Q Consensus 4 ~p~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~i-dgh~~~VIa~DG~~v-~P~~v~~l~l 81 (377)
....+|.+||||+. .++++|++| +|||||||+|+.+.+.|+| |||+|+|||+||+++ +|+.+++|.|
T Consensus 178 ~~~~~d~~liNG~~----------~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l 246 (451)
T 2uxt_A 178 GGFVGDTLLVNGVQ----------SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSL 246 (451)
T ss_dssp SCCCCSEEEETTEE----------SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEE
T ss_pred CCCcCCEEEECCcc----------cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEE
Confidence 34578999999997 579999999 9999999999999999999 899999999999998 8999999999
Q ss_pred CCCCEEEEEEEeCCCCCceeEEeeccCCCCC-------CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhh
Q 017112 82 APGQTTNVLVQANQKPGRYFMAARPFNDAPI-------PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKK 154 (377)
Q Consensus 82 ~~GqR~dvlv~~~~~~g~y~l~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 154 (377)
++||||||+|++++ +++|||++.....+.. ........++++|.......+. ....|. .
T Consensus 247 ~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p~------------~ 312 (451)
T 2uxt_A 247 APGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLPM------------R 312 (451)
T ss_dssp CTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCCS------------C
T ss_pred CceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCcc------------c
Confidence 99999999999986 5899999875432110 0112234578888754322111 111111 1
Q ss_pred ccCCCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCC
Q 017112 155 LRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKP 234 (377)
Q Consensus 155 l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~ 234 (377)
|.++... + .+...++++.+ + + .|+|||++|..+
T Consensus 313 L~~~~~~--~--~~~~~~~~~~l--~-----------~---~~~iNg~~f~~~--------------------------- 345 (451)
T 2uxt_A 313 LLPTEIM--A--GSPIRSRDISL--G-----------D---DPGINGQLWDVN--------------------------- 345 (451)
T ss_dssp SSSSCCC--C--CCCSEEEEEEE--C-----------S---SSSBTTBCCCTT---------------------------
T ss_pred cCCCCCC--C--CCCcceEEEEE--e-----------e---EEEECCEeCCCC---------------------------
Confidence 2222211 1 11122333333 2 1 388999988321
Q ss_pred CCCCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcc
Q 017112 235 FNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIER 314 (377)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~r 314 (377)
...+.++.|++|+|+|+|. +.||||||||.|||++++.. .+++.+|.||
T Consensus 346 -----------------~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~---------~~~~~~p~~r 394 (451)
T 2uxt_A 346 -----------------RIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA---------MPFPEDRGWK 394 (451)
T ss_dssp -----------------CCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB---------CCCGGGSSCB
T ss_pred -----------------CCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc---------CCCcccCCCc
Confidence 1136788999999999995 47999999999999998622 2456789999
Q ss_pred ceeeeCCCCEEEEEEEcCCcee----eEeeechHHHHhccceeEEEEeCCC
Q 017112 315 NTAAVPTGGWTAIRFRADNPGV----WFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 315 Dtv~v~~~~~~~i~~~~d~pG~----w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
|||.| +++++|+|++||||. |||||||++|++.|||++|+|.+.+
T Consensus 395 DTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 395 DTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp SEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred cEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 99999 999999999999988 9999999999999999999998653
No 13
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=5.2e-50 Score=393.79 Aligned_cols=256 Identities=19% Similarity=0.314 Sum_probs=190.0
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEE--cC---ceEEEEEeCCCccC-ceEecEE
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAI--AG---HNFTVVEVDAVYTK-PFTTEAI 79 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~i--dg---h~~~VIa~DG~~v~-P~~v~~l 79 (377)
..+|.+||||+. .+.++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||++++ |+.+++|
T Consensus 167 ~~~~~~liNG~~----------~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l 235 (448)
T 3aw5_A 167 FLGNAVLVNGVK----------DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRAL 235 (448)
T ss_dssp CCCSEEEETTEE----------TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCE
T ss_pred ccccEEEECCcc----------cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceE
Confidence 468999999997 589999999 9999999999999999999 99 99999999999997 9999999
Q ss_pred EeCCCCEEEEEEEeCCCCCceeEEeeccCCCCC----------CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHH
Q 017112 80 LIAPGQTTNVLVQANQKPGRYFMAARPFNDAPI----------PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFAL 149 (377)
Q Consensus 80 ~l~~GqR~dvlv~~~~~~g~y~l~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~ 149 (377)
.|++||||||+|++++ +.|||++.+...+.. +.......+.++|.+...... |.
T Consensus 236 ~l~pgeR~dvlv~~~~--~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~-------- 299 (448)
T 3aw5_A 236 FLAPAERAEVVVELGE--GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE-------- 299 (448)
T ss_dssp EECTTCEEEEEEEECS--EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC--------
T ss_pred EECCcceEEEEEECCC--CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc--------
Confidence 9999999999999983 689999876543210 112234567788865432111 10
Q ss_pred hhhhhccCCCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCC
Q 017112 150 NYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPD 229 (377)
Q Consensus 150 ~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~ 229 (377)
.|..+... ..+...++++.+..+. ..|+|||++|..+
T Consensus 300 ----~L~~lp~~----~~~~~~~~~~~l~~~~-------------~~~~iNg~~~~~~---------------------- 336 (448)
T 3aw5_A 300 ----ALSDPPPE----PPKPTRTRRFALSLSG-------------MQWTINGMFWNAS---------------------- 336 (448)
T ss_dssp ----CCSCCCCC----CCCCSEEEEEEEEEET-------------TEEEETTBCCCTT----------------------
T ss_pred ----ccCCCCCC----CCCCCceEEEEEeCCC-------------ceeeECCCcCCCC----------------------
Confidence 01111111 1122345555554321 1389999998321
Q ss_pred CCCCCCCCCCCCCCCccCcCCceeeee-eccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCC--
Q 017112 230 KPPKPFNYTGAPLTASLGTSRATRLSK-IAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANY-- 306 (377)
Q Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~-- 306 (377)
...+. ++.|++|+|+|+|.+ ..+.||||||||+|||++++ |.+........+
T Consensus 337 ----------------------~p~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~ 391 (448)
T 3aw5_A 337 ----------------------NPLFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNR 391 (448)
T ss_dssp ----------------------CTTCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTT
T ss_pred ----------------------CCceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCccccccccccc
Confidence 11244 788999999999975 14689999999999999985 333211111122
Q ss_pred --CCCCCCccceeeeCCCCEEEEE--EE---cCCceeeEeeechHHHHhccceeEEEEe
Q 017112 307 --NLVDPIERNTAAVPTGGWTAIR--FR---ADNPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 307 --~~~np~~rDtv~v~~~~~~~i~--~~---~d~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
+..++.|||||.|+++++++|+ |+ +||| |+|||||+||++.|||++|+|+
T Consensus 392 ~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 392 GRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp CCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 2345579999999999999766 88 8999 9999999999999999999874
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=3.9e-49 Score=404.01 Aligned_cols=305 Identities=18% Similarity=0.235 Sum_probs=181.9
Q ss_pred CCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc-------eEEEEEeCCCcc-CceEe
Q 017112 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGH-------NFTVVEVDAVYT-KPFTT 76 (377)
Q Consensus 5 p~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh-------~~~VIa~DG~~v-~P~~v 76 (377)
+..+|.++|||+. .+.+.+++ ++|||||||+|+.+.|+|+|++| +|+|||+||+++ +|+.+
T Consensus 251 ~~~gd~~~vNG~~----------~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v 319 (612)
T 3gyr_A 251 PFFGPYTTVNGRI----------WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPV 319 (612)
T ss_dssp CCCCSEEEETTEE----------SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEE
T ss_pred CccCceeeecCCc----------cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceec
Confidence 3568999999986 67888886 58999999999999999999998 499999999999 67766
Q ss_pred c------EEEeCCCCEEEEEEEeCCCCCceeEEeeccCCCCC----CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChh
Q 017112 77 E------AILIAPGQTTNVLVQANQKPGRYFMAARPFNDAPI----PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSE 146 (377)
Q Consensus 77 ~------~l~l~~GqR~dvlv~~~~~~g~y~l~~~~~~~~~~----~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~ 146 (377)
+ +|.|++||||||||++++..|.++........... ........++++|.......... ...|......
T Consensus 320 ~~p~~~~~l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~ 398 (612)
T 3gyr_A 320 DFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDS-FALPEVLSGS 398 (612)
T ss_dssp CSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCC-CCCCSSCCSS
T ss_pred cCcccccEEEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCc-cccccccccc
Confidence 4 79999999999999999876655443332211111 11122334566665332221110 1111110000
Q ss_pred hHHhhhhhccCCCCCCCCCCCCcccceeEEEEeccCCCCCCcccCCceeeeeeccee----eecCchhhhhhhhcccCcc
Q 017112 147 FALNYNKKLRSLNSPKFPADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNIS----FVMPQTALLQAHYFNLKGV 222 (377)
Q Consensus 147 ~~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~----~~~p~~~l~~~~~~~~~~~ 222 (377)
... .....+. ..+........... .......+.++... +..+....+.
T Consensus 399 --------~~~-----~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 450 (612)
T 3gyr_A 399 --------FRR-----MSHDIPH-GHRLIVLTPPGTKG-----SGGHPEIWEMAEVEDPADVQVPAEGVIQ--------- 450 (612)
T ss_dssp --------CCC-----CCTTSCC-EEEEEEEECTTCTT-----TTTCCEEEEEEECC-----CCSCTTEEE---------
T ss_pred --------ccc-----ccccccc-cccccccccccccc-----ccccccccccccccccccccccccceee---------
Confidence 000 0000000 00111111000000 00000001110000 0000000000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCC--
Q 017112 223 FKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPV-- 300 (377)
Q Consensus 223 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~-- 300 (377)
....+.....+..++ ........+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+...
T Consensus 451 --~~~~~~~~~~~~~n~-------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~ 518 (612)
T 3gyr_A 451 --VTGADGRTKTYRRTA-------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDL 518 (612)
T ss_dssp --EECTTSCEEEEEEEE-------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEET
T ss_pred --eccCCCccccccccC-------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCccccc
Confidence 000000000000010 0112234578899999999999975 56899999999999999864332210
Q ss_pred -----C--------CCCCCCCCCCCccceeeeCCCCEEEEEEE-cCCceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 301 -----K--------YPANYNLVDPIERNTAAVPTGGWTAIRFR-ADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 301 -----~--------~~~~~~~~np~~rDtv~v~~~~~~~i~~~-~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
. .+...+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||+.|+|.+++
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 519 ALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp TTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred cccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 0 11235567889999999999999999998 7999999999999999999999999998654
No 15
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=6.2e-48 Score=380.13 Aligned_cols=260 Identities=18% Similarity=0.282 Sum_probs=185.1
Q ss_pred CCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc-CceEecEEEeCCCC
Q 017112 7 MSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTEAILIAPGQ 85 (377)
Q Consensus 7 ~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v-~P~~v~~l~l~~Gq 85 (377)
.+|.+||||+. .++++|++|+ ||||||+|+.+.++|+|+||+|+|||+||+++ +|+.+++|.|+|||
T Consensus 210 ~gd~~lvNG~~----------~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pge 277 (481)
T 3zx1_A 210 EGEFVLINGQF----------KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPAS 277 (481)
T ss_dssp CCSEEEETTEE----------SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTC
T ss_pred cCCEEEECCcc----------CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCcc
Confidence 68999999997 6799999998 99999999999999999999999999998877 89999999999999
Q ss_pred EEEEEEEeCCCCCceeEEeeccCCCCC-CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCC
Q 017112 86 TTNVLVQANQKPGRYFMAARPFNDAPI-PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFP 164 (377)
Q Consensus 86 R~dvlv~~~~~~g~y~l~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p 164 (377)
||||+|++++ .++|.|.+........ .........++++...... . ..|. .|.++.. ++
T Consensus 278 R~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~---~lP~------------~l~~~~~--~~ 337 (481)
T 3zx1_A 278 RVEVLIDAPK-DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN--V---ELPK------------NLKIFKP--SE 337 (481)
T ss_dssp EEEEEEECSS-CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC--C---CCCS------------CSCCCCC--CC
T ss_pred EEEEEEEcCC-CcEEEEEEecccccCccccCCCCceeEEEEecCCCC--c---cCCc------------cccCCCC--CC
Confidence 9999999986 5788888754432110 0011223334444322111 1 1111 0111111 01
Q ss_pred CCCCcccceeEEEEeccCCCCCCccc-CCce-------eeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCC
Q 017112 165 ADVPQKVDRKLFYTIGFGKDSCPTCV-NGTR-------LLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFN 236 (377)
Q Consensus 165 ~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~ 236 (377)
.+ ...+++.+..... ...... .+.. ..|+|||+.|..
T Consensus 338 --~~-~~~r~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~------------------------------ 382 (481)
T 3zx1_A 338 --EP-KEFKEIIMSEDHM--QMHGMMGKSEGELKIALASMFLINRKSYDL------------------------------ 382 (481)
T ss_dssp --CC-CEEEEEEEEECCS--TTTTGGGCCHHHHHHHHHTTEEETTBCCCT------------------------------
T ss_pred --CC-CcEEEEEEeccch--hcccccccccccccccccceeEECCEeCCC------------------------------
Confidence 11 1344444443221 100000 0000 137888887721
Q ss_pred CCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEec-CCCCCCCCCCCCCCCCCCCccc
Q 017112 237 YTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTG-IGNFDPVKYPANYNLVDPIERN 315 (377)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g-~g~~~~~~~~~~~~~~np~~rD 315 (377)
....+.++.|++|+|+|.|.+ .+.|||||||+.|||+++. .|. .....++.|||
T Consensus 383 --------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~--------~~~~~~~~~kD 437 (481)
T 3zx1_A 383 --------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK--------VQKAEFRALRD 437 (481)
T ss_dssp --------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE--------EEECSSCCEES
T ss_pred --------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC--------CCCcccCcccc
Confidence 123478899999999999964 6789999999999999983 121 11123578999
Q ss_pred eeeeCCCCEEEEEEEcCCceeeEeeechHHHHhccceeEEEEe
Q 017112 316 TAAVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 316 tv~v~~~~~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|+++++|+|++||||.||||||+++|++.|||+.|+|+
T Consensus 438 Tv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 438 TINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred eEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 9999999999999999999999999999999999999999986
No 16
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=7.9e-48 Score=388.39 Aligned_cols=281 Identities=18% Similarity=0.208 Sum_probs=187.8
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc-------eEEEEEeCCCcc-CceEec
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGH-------NFTVVEVDAVYT-KPFTTE 77 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh-------~~~VIa~DG~~v-~P~~v~ 77 (377)
..+|.+||||+. .++++|++| +|||||||+|+.+.|+|+|++| +|+|||+||+++ +|+.++
T Consensus 252 ~~gd~~lVNG~~----------~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~ 320 (612)
T 2g23_A 252 FFGPYTTVNGRI----------WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVD 320 (612)
T ss_dssp CCCSEEEETTEE----------SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEEC
T ss_pred CcCCEEEECCcc----------CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEec
Confidence 578999999997 689999999 9999999999999999999999 899999999999 699999
Q ss_pred ------EEEeCCCCEEEEEEEeCCCCC-ceeEEeeccCCCCCCC---CCcceEEEEEEcCCCCCCCCCCCCCCCCCChhh
Q 017112 78 ------AILIAPGQTTNVLVQANQKPG-RYFMAARPFNDAPIPV---DNKTATGILQYKGIPNSLLPTLAQLPASNDSEF 147 (377)
Q Consensus 78 ------~l~l~~GqR~dvlv~~~~~~g-~y~l~~~~~~~~~~~~---~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~ 147 (377)
+|.|++||||||||++++.+| +|+|+........... .......++++......... ...+|.
T Consensus 321 ~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~-~~~~P~------ 393 (612)
T 2g23_A 321 FDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED-SFALPE------ 393 (612)
T ss_dssp SSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC-CCCCCS------
T ss_pred ccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCC-CCCCCh------
Confidence 999999999999999998656 6888876422111000 00111235555432211110 011111
Q ss_pred HHhhhhhccCCCCCCCCCCCCcccceeEEEEe--ccCCCC-------------------CC-----cccCCceeeeeecc
Q 017112 148 ALNYNKKLRSLNSPKFPADVPQKVDRKLFYTI--GFGKDS-------------------CP-----TCVNGTRLLATLNN 201 (377)
Q Consensus 148 ~~~~~~~l~~l~~~~~p~~~p~~~~~~~~~~~--~~~~~~-------------------~~-----~~~~~~~~~~~iN~ 201 (377)
.|.+. ...++..++. ..|.+.+.. +.+.+. .. ...+|....|+|||
T Consensus 394 ------~L~~~-~~~l~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG 465 (612)
T 2g23_A 394 ------VLSGS-FRRMSHDIPH-GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTA 465 (612)
T ss_dssp ------SCCSS-CCCCCTTSCC-EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEE
T ss_pred ------hhccc-cccCCccccc-ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECC
Confidence 01100 0001111110 011111100 000000 00 00022233455666
Q ss_pred eeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCee
Q 017112 202 ISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFH 281 (377)
Q Consensus 202 ~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~H 281 (377)
+.|. ....+.++.|++|+|+|+|.+ .+.||||
T Consensus 466 ~~~~---------------------------------------------~~~~~~v~~G~~v~w~l~N~~---~~~HPiH 497 (612)
T 2g23_A 466 ATFN---------------------------------------------DGLGFTIGEGTHEQWTFLNLS---PILHPMH 497 (612)
T ss_dssp CSTT---------------------------------------------SCCCEEEETTCEEEEEEEECS---SSCEEEE
T ss_pred ccCC---------------------------------------------CCCceEecCCCEEEEEEEeCC---CCCCCeE
Confidence 6551 123578899999999999975 5689999
Q ss_pred ecCCceEEEEecCCCC---CCCC----C--------CCCCCCCCCCccceeeeCCCCEEEEEEEcC-CceeeEeeechHH
Q 017112 282 LHGYNFFVVGTGIGNF---DPVK----Y--------PANYNLVDPIERNTAAVPTGGWTAIRFRAD-NPGVWFMHCHLEL 345 (377)
Q Consensus 282 lHg~~f~vl~~g~g~~---~~~~----~--------~~~~~~~np~~rDtv~v~~~~~~~i~~~~d-~pG~w~~HCHi~~ 345 (377)
|||+.|+|++++.+.+ +... . ....+..++.|||||.|+|+++++|+|+++ +||.|||||||++
T Consensus 498 lHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~ 577 (612)
T 2g23_A 498 IHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLE 577 (612)
T ss_dssp ESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHH
T ss_pred EcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchh
Confidence 9999999999853211 1100 0 022445667899999999999999999999 9999999999999
Q ss_pred HHhccceeEEEEeCC
Q 017112 346 HTGWGLKTAFAVEDG 360 (377)
Q Consensus 346 H~~~Gm~~~~~v~~~ 360 (377)
|++.|||+.|+|.+.
T Consensus 578 Hed~GMm~~f~V~p~ 592 (612)
T 2g23_A 578 HEDMGMMRPFVVMPP 592 (612)
T ss_dssp HHTTTCEEEEEEECH
T ss_pred HhhcCCceEEEECch
Confidence 999999999999754
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.7e-46 Score=369.71 Aligned_cols=264 Identities=21% Similarity=0.281 Sum_probs=178.9
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEE-cCceEEEEEeCCCcc-CceEecEEEeCC
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAI-AGHNFTVVEVDAVYT-KPFTTEAILIAP 83 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~i-dgh~~~VIa~DG~~v-~P~~v~~l~l~~ 83 (377)
..+|.+||||+. .+.+.+ +|++|||||||+|+.+.|+|+| |||+|+|||+||+++ +|+.+++|.|++
T Consensus 181 ~~gd~~lvNG~~----------~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P~~~~~l~l~p 249 (488)
T 3od3_A 181 WFGDTLLTNGAI----------YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLM 249 (488)
T ss_dssp CCCSEEEETTBS----------SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESCEEECT
T ss_pred CCCCEEEEcCCc----------CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCccEeceEEECC
Confidence 468999999996 467766 5689999999999999999999 699999999999987 899999999999
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCC---CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPI---PVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNS 160 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~ 160 (377)
||||||||++++ .+.|+|++........ .+.. ...+++.......... .+|. .|..+..
T Consensus 250 GeR~dvlv~~~~-~~~~~l~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~---~~P~------------~L~~~~~ 311 (488)
T 3od3_A 250 GERFEVLVEVND-NKPFDLVTLPVSQMGMAIAPFDK--PHPVMRIQPIAISASG---ALPD------------TLSSLPA 311 (488)
T ss_dssp TCEEEEEEEECT-TCCEEEEECCCSSTTTTSTTTTS--CEEEEEEEEEEEECCC---CCCS------------CCCCCCC
T ss_pred CCEEEEEEEeCC-CceEEEEEeccCCCCcccccccC--ccceeEecccccCCCC---CCCc------------ccccCCC
Confidence 999999999986 5789998765432211 1111 2223333211000000 0110 0111100
Q ss_pred CCCCCCCCcccceeEEEEecc----------------CCCCCC---------------cccCCcee----eeeecceeee
Q 017112 161 PKFPADVPQKVDRKLFYTIGF----------------GKDSCP---------------TCVNGTRL----LATLNNISFV 205 (377)
Q Consensus 161 ~~~p~~~p~~~~~~~~~~~~~----------------~~~~~~---------------~~~~~~~~----~~~iN~~~~~ 205 (377)
.|. ......+++.+.+.. +..... ....|..+ .|+|||++|.
T Consensus 312 --~~~-~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~~ 388 (488)
T 3od3_A 312 --LPS-LEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFD 388 (488)
T ss_dssp --CCC-CTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCCC
T ss_pred --Ccc-cccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeCC
Confidence 011 111234555554310 000000 00001111 2578888772
Q ss_pred cCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCC
Q 017112 206 MPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGY 285 (377)
Q Consensus 206 ~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~ 285 (377)
+ ....+.++.|++|+|+|.|.+. .+.|||||||+
T Consensus 389 ~--------------------------------------------~~~~~~~~~G~~e~w~l~N~~~--~~~Hp~HlHg~ 422 (488)
T 3od3_A 389 M--------------------------------------------NKPMFAAAKGQYERWVISGVGD--MMLHPFHIHGT 422 (488)
T ss_dssp T--------------------------------------------TCCSEECCBSSCEEEEEECTTC--CCCEEEEETTC
T ss_pred C--------------------------------------------CCCceEcCCCCEEEEEEEeCCC--CCCccEEEcCc
Confidence 1 1224678999999999999752 46899999999
Q ss_pred ceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC----CceeeEeeechHHHHhccceeEEEE
Q 017112 286 NFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD----NPGVWFMHCHLELHTGWGLKTAFAV 357 (377)
Q Consensus 286 ~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d----~pG~w~~HCHi~~H~~~Gm~~~~~v 357 (377)
.|+|++++... ....++.|||||.|+ |++++|+|+++ +||.||||||+++|+|.|||++|+|
T Consensus 423 ~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 423 QFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp CBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred eEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 99999985321 112246799999999 99999999975 4789999999999999999999986
No 18
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.97 E-value=1.3e-30 Score=257.00 Aligned_cols=251 Identities=18% Similarity=0.133 Sum_probs=160.1
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCC-CCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 86 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~-~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR 86 (377)
.+.+++||+.. .|+|++++|++|||||+|++. ...+.+.+.| + ++.||.+ +.+.|.||||
T Consensus 183 ~~~~~~NG~~p---------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg--~--~~~DG~~------~~~~i~pG~~ 243 (447)
T 2dv6_A 183 YTYWTFNGKVP---------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHG--A--TGPGGAA------AFTQTDPGEE 243 (447)
T ss_dssp EEEEEETTBBS---------CCCEEEETTCEEEEEEEECTTCSSCBCCEETT--C--CSGGGGG------GGCCBCTTCE
T ss_pred eEEEEECCccC---------CCeEEecCCCEEEEEEEeCCCCceeEEEeecc--c--cCCCCCC------ccEEeCCCCE
Confidence 35678888741 479999999999999999985 2344455544 3 3689973 2346999999
Q ss_pred EEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCC
Q 017112 87 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPAD 166 (377)
Q Consensus 87 ~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~ 166 (377)
|++++++++ +|+||++......... ......+.+.+.+... .|..+.. .. ..+..... +..
T Consensus 244 ~~~~~~~~~-~G~~~yh~h~~~~~~~--~~~Gl~g~l~v~~~~~--------~P~~d~~-~~----~~~~~~~~---~~~ 304 (447)
T 2dv6_A 244 TVVTFKALI-PGIYVYHCATPSVPTH--ITNGMYGLLLVEPEGG--------LPQVDRE-FY----VMQGEIYT---VKS 304 (447)
T ss_dssp EEEEEECCS-CEEEEEECCSSSHHHH--HHTTCEEEEEEECTTC--------SCCCSEE-EE----EEEEEECB---SSC
T ss_pred EEEEEECCC-CeEEEEEeCCCChHHH--HhCCCEEEEEEeCCCC--------CCCCCee-EE----EEeccccc---CCc
Confidence 999999987 6999998764210000 0012345666654321 1111110 00 00000000 000
Q ss_pred CCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCcc
Q 017112 167 VPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASL 246 (377)
Q Consensus 167 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 246 (377)
. .......+... .........+.|||+.+..
T Consensus 305 ~--~~~g~~~~~~~-------~~~~~~~~~~~iNG~~~~~---------------------------------------- 335 (447)
T 2dv6_A 305 F--GTSGEQEMDYE-------KLINEKPEYFLFNGSVGSL---------------------------------------- 335 (447)
T ss_dssp T--TCCEECCBBHH-------HHHTTCCSEEEETTSTTCC----------------------------------------
T ss_pred c--cccccccCChH-------HhhccCCCEEEECCcccCC----------------------------------------
Confidence 0 00000000000 0001111235667665510
Q ss_pred CcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCC-ccceeeeCCCCEE
Q 017112 247 GTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI-ERNTAAVPTGGWT 325 (377)
Q Consensus 247 ~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~-~rDtv~v~~~~~~ 325 (377)
.....+.++.|++++|+|+|.+. ...||||||||.|+|++.+.+. +.+|. +|||+.|++|+++
T Consensus 336 ---~~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~~-----------~~~p~~~~dtv~l~pg~r~ 399 (447)
T 2dv6_A 336 ---TRSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGSV-----------VSPPLIGVQTVSVPPGGAT 399 (447)
T ss_dssp ---CCCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGCS-----------SSCCEEEESEEEECTTEEE
T ss_pred ---CCCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCcc-----------cCCCcccccEEEECCCcEE
Confidence 01135788999999999999762 4589999999999999985321 22444 7999999999999
Q ss_pred EEEEEcCCceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 326 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 326 ~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
+|+|+++|||.|+||||+++|++.||+++|.|+.+.
T Consensus 400 ~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 400 IVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp EEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred EEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 999999999999999999999999999999997654
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=3.7e-29 Score=237.34 Aligned_cols=241 Identities=16% Similarity=0.165 Sum_probs=160.9
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEe---CCCccCceEecEEEeCCC
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEV---DAVYTKPFTTEAILIAPG 84 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~---DG~~v~P~~v~~l~l~~G 84 (377)
.+.+++||+.. .|+|++++|+++|+||+|.+.. ..+|+.|-+++++. ||.+. +++..|.||
T Consensus 23 ~~~~~~NG~~p---------GP~I~v~~Gd~v~v~v~N~l~~---~~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQVP---------GPLIHVQEGDDVIVNVTNNTSL---PHTIHWHGVHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEEESSS---CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCccC---------CCeEEEECCCEEEEEEEECCCC---CccEEeCCCCcCCCcccCCCCc----cccCccCCC
Confidence 35689999842 5899999999999999999864 35777777888886 99863 355779999
Q ss_pred CEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCC
Q 017112 85 QTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFP 164 (377)
Q Consensus 85 qR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p 164 (377)
|||+..+++++ +|+||..+.............. .+++. ...... . .+.
T Consensus 87 ~~~~y~f~~~~-~Gt~wyH~H~~~~~q~~~~Gl~-G~liV-~p~~~~---~---~~~----------------------- 134 (339)
T 2zwn_A 87 DSYTYKFKADR-IGTLWYHCHVNVNEHVGVRGMW-GPLIV-DPKQPL---P---IEK----------------------- 134 (339)
T ss_dssp CEEEEEEECCS-CEEEEEECCSSHHHHTTTSCCE-EEEEE-ECSSCC---T---TGG-----------------------
T ss_pred CeEEEEEECCC-CEEEEEEecCCchhhhhcCCce-EeEEe-cCCCcc---c---ccc-----------------------
Confidence 99999999985 7999998753210000001111 22332 221110 0 000
Q ss_pred CCCCcccceeEEEEeccC-C-CCCCcc---cCC-ceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCC
Q 017112 165 ADVPQKVDRKLFYTIGFG-K-DSCPTC---VNG-TRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYT 238 (377)
Q Consensus 165 ~~~p~~~~~~~~~~~~~~-~-~~~~~~---~~~-~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~ 238 (377)
..++.+.+.++.- . ...... ... ....+.|||+.+.
T Consensus 135 -----~~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~~~--------------------------------- 176 (339)
T 2zwn_A 135 -----RVTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKSFP--------------------------------- 176 (339)
T ss_dssp -----GCSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBCTT---------------------------------
T ss_pred -----cCCceEEEEeeheecccccccCCCCCCccccceEEEccccCC---------------------------------
Confidence 0011111111100 0 000000 000 1123566665441
Q ss_pred CCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceee
Q 017112 239 GAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAA 318 (377)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~ 318 (377)
....+.++.|++++|+|+|.+ ...||||||||.|+|++...+ .+.+|.++||+.
T Consensus 177 ------------~~~~~~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~DG~-----------~~~~p~~~dtv~ 230 (339)
T 2zwn_A 177 ------------LTQPLRVKKGDVVKIRFFGAG---GGIHAMHSHGHDMLVTHKDGL-----------PLDSPYYADTVL 230 (339)
T ss_dssp ------------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEETTE-----------EEEEEEEESEEE
T ss_pred ------------CcccEEECCCCEEEEEEEeCC---CceEEEEECCcEEEEEEeCCe-----------ecCCCcEEEEEE
Confidence 112478889999999999986 348999999999999998422 123477999999
Q ss_pred eCCCCEEEEEEEcCCceeeEeeechHHH------HhccceeEEEEeCC
Q 017112 319 VPTGGWTAIRFRADNPGVWFMHCHLELH------TGWGLKTAFAVEDG 360 (377)
Q Consensus 319 v~~~~~~~i~~~~d~pG~w~~HCHi~~H------~~~Gm~~~~~v~~~ 360 (377)
|++|+++.|+|++++||.|+||||+.+| ++.||++.+.+...
T Consensus 231 l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 231 VSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp ECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred ECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 9999999999999999999999999999 78999999998654
No 20
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=6e-29 Score=235.79 Aligned_cols=216 Identities=18% Similarity=0.213 Sum_probs=149.4
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCC-----------
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK----------- 96 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~----------- 96 (377)
.|+|++++|+++|+||+|..... +.|...|..+. ++.||.++ +...|.|||+++..++++++
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~~-~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDVR-ASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCCC-eeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 58999999999999999999654 44777777766 68999975 35578999999999998653
Q ss_pred -CCceeEEeeccCCC---CCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCCCcccc
Q 017112 97 -PGRYFMAARPFNDA---PIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVD 172 (377)
Q Consensus 97 -~g~y~l~~~~~~~~---~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~ 172 (377)
.|.||......... ........+..++...+. . ..|
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~----~------------------------------------~pd 188 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----V------------------------------------LPD 188 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----C------------------------------------CCS
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCCC----C------------------------------------CCC
Confidence 23444433211100 000001112222221100 0 012
Q ss_pred eeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccCcCCce
Q 017112 173 RKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRAT 252 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 252 (377)
+++.+.++ .|+|||+.+. ..
T Consensus 189 ~e~~l~~~---------------d~~iNG~~~~---------------------------------------------~~ 208 (343)
T 3cg8_A 189 ATHTIVFN---------------DMTINNRKPH---------------------------------------------TG 208 (343)
T ss_dssp EEEEEEEE---------------TTEETTCCTT---------------------------------------------CC
T ss_pred ceEEEEcc---------------cceecccCCC---------------------------------------------CC
Confidence 33333322 1678887541 12
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEc-
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA- 331 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~- 331 (377)
+.+.++.|++|+|+|.|.+ ...||||||||.|+|+.. |.+.. ....+.|+||+.|.++++++++|++
T Consensus 209 ~~l~v~~Ge~vri~l~N~g---~~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG~~~~v~~~~~ 276 (343)
T 3cg8_A 209 PDFEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPADSFGFQIIAG 276 (343)
T ss_dssp CCEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTCEEEEEEETT
T ss_pred ccEEeCCCCEEEEEEEcCC---ccccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCCCEEEEEEEEC
Confidence 3578999999999999986 368999999999999743 32221 1123578999999999999999995
Q ss_pred --CCceeeEeeechHHHHhccceeEEEEeCCCC
Q 017112 332 --DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 332 --d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~ 362 (377)
++||.|+||||+++|++.|||+.|.|.+.++
T Consensus 277 ~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 277 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 8999999999999999999999999987653
No 21
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=1.5e-28 Score=228.01 Aligned_cols=234 Identities=18% Similarity=0.201 Sum_probs=161.1
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 87 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~ 87 (377)
...+++||+.. .|.|+++.|+++++|+.|.... ...+.+.|.. ..+.||.+- ++...|.|||++
T Consensus 54 ~~~~~~ng~~p---------gP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRIP---------GPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBSS---------CCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCccC---------CCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 35678898852 5899999999999999999764 5567888865 457899865 244678999999
Q ss_pred EEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCC
Q 017112 88 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 167 (377)
Q Consensus 88 dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 167 (377)
+.-+++++ +|.||.............. ...+.+........ +.
T Consensus 118 ~y~f~~~~-~Gt~~yH~H~~~~~~~~~~--Gl~G~liV~~~~~~--------~~-------------------------- 160 (288)
T 3gdc_A 118 TYEFDATP-FGTHLYHCHQSPLAPHIAK--GLYGGFIVEPKEGR--------PP-------------------------- 160 (288)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHT--TCEEEEEEECSSCC--------CC--------------------------
T ss_pred EEEEEcCC-CccEEEEecCcchHHHHhC--cCeEEEEEeCCccC--------CC--------------------------
Confidence 99999964 7999987764210000001 12233333321100 00
Q ss_pred CcccceeEEEEecc-CCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCcc
Q 017112 168 PQKVDRKLFYTIGF-GKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASL 246 (377)
Q Consensus 168 p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 246 (377)
.++++.+.+.. .... +.....++|||+.|..
T Consensus 161 ---~d~e~~l~~~d~~~~~-----g~~~~~~~iNG~~~~~---------------------------------------- 192 (288)
T 3gdc_A 161 ---ADDEMVMVMNGYNTDG-----GDDNEFYSVNGLPFHF---------------------------------------- 192 (288)
T ss_dssp ---CSEEEEEEEEEECCSS-----TTCCSEEEETTSTTHH----------------------------------------
T ss_pred ---CcceEEEEEeeEecCC-----CCCcceEEECcccccc----------------------------------------
Confidence 11222222211 0000 0012236788876621
Q ss_pred CcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEE
Q 017112 247 GTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTA 326 (377)
Q Consensus 247 ~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~ 326 (377)
....+.++.|++|+|++.|.+.. +..||||||||.|+|++.+. .+..|.++||+.|++|++++
T Consensus 193 ----~~~~l~v~~Ge~vr~~l~N~g~~-~~~H~fHlhG~~f~v~~~g~------------~~~~~~~~Dtv~v~pg~~~~ 255 (288)
T 3gdc_A 193 ----MDFPVKVKQHELVRIHLINVLEY-DPINSFHIHGNFFHYYPTGT------------MLTPSEYTDTISQVQGQRGI 255 (288)
T ss_dssp ----HHSCEEEETTCCEEEEEEECCCS-SSEEEEEETTCCEEEEETTC------------CSSCSEEESEEEEETTCEEE
T ss_pred ----cCcccccCCCCEEEEEEEeCCCC-CcceeEEEcCCEEEEEcCCC------------ccCCCceeeEEEeCCCceEE
Confidence 01246788999999999998621 24699999999999997542 12346799999999999999
Q ss_pred EEEEcCCceeeEeeechHHHHhccceeEEEEeC
Q 017112 327 IRFRADNPGVWFMHCHLELHTGWGLKTAFAVED 359 (377)
Q Consensus 327 i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~ 359 (377)
|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 256 v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 256 LELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 999999999999999999999999999999863
No 22
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=2.8e-27 Score=222.17 Aligned_cols=243 Identities=19% Similarity=0.188 Sum_probs=159.5
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEE-EEEeCCCccCceEecEEEeCCCCEE
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFT-VVEVDAVYTKPFTTEAILIAPGQTT 87 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~-VIa~DG~~v~P~~v~~l~l~~GqR~ 87 (377)
..+++||+.. .|+|+++.|+++++|+.|.... ...+.+.|.... ..+.||.+- +....|.|||++
T Consensus 23 ~~~~~ng~~p---------GP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQVP---------APLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBSS---------CCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCccC---------CceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 5678999852 5899999999999999998754 456666666433 236799764 345689999999
Q ss_pred EEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCC
Q 017112 88 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 167 (377)
Q Consensus 88 dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 167 (377)
+..+++++ +|.||.............. ...+.|........ .. + .
T Consensus 89 ~y~f~~~~-~Gt~wYH~H~~~~~~~~~~--Gl~G~lIV~~~~~~---~~---~--------~------------------ 133 (318)
T 3g5w_A 89 TYKFKAEP-AGTMWYHCHVNVNEHVTMR--GMWGPLIVEPKNPL---PI---E--------K------------------ 133 (318)
T ss_dssp EEEEECCS-CEEEEEECCSSHHHHHHHS--CCEEEEEEECSSCC---HH---H--------H------------------
T ss_pred EEEEEcCC-CEEEEEEccCChhhhhccC--CCEEEEEEcCCCcc---cc---c--------c------------------
Confidence 99999975 7999987653210000001 12233333322110 00 0 0
Q ss_pred CcccceeEEEEeccCC--CCCCcc----cCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCC
Q 017112 168 PQKVDRKLFYTIGFGK--DSCPTC----VNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAP 241 (377)
Q Consensus 168 p~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 241 (377)
..++.+.+.++.-. ...... .....-.++|||+.|.
T Consensus 134 --~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~------------------------------------ 175 (318)
T 3g5w_A 134 --TVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFP------------------------------------ 175 (318)
T ss_dssp --TCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBT------------------------------------
T ss_pred --cccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCC------------------------------------
Confidence 00111111111000 000000 0001123677777651
Q ss_pred CCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCC
Q 017112 242 LTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT 321 (377)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~ 321 (377)
....+.++.|++++|+|.|.+ ...||||||||.|+|+++..+ .+.+|.++||+.|.+
T Consensus 176 ---------~~~~l~v~~G~~vrlrliN~~---~~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 176 ---------ETQPIRVKKGDVIRLRLIGAG---DHVHAIHTHGHISQIAFKDGF-----------PLDKPIKGDTVLIGP 232 (318)
T ss_dssp ---------SSCCEEECTTCEEEEEEEECS---SSCEEEEETTSCEEEEEETTE-----------EEEEEEEESEEEECT
T ss_pred ---------CCccEEeCCCCEEEEEEEeCC---CceEEEEECCcEEEEEecCCc-----------ccCCCccccEEEECC
Confidence 112478899999999999986 347999999999999998422 123577999999999
Q ss_pred CCEEEEEEEcCCceeeEeeechHHHHh------ccceeEEEEeCCC
Q 017112 322 GGWTAIRFRADNPGVWFMHCHLELHTG------WGLKTAFAVEDGP 361 (377)
Q Consensus 322 ~~~~~i~~~~d~pG~w~~HCHi~~H~~------~Gm~~~~~v~~~~ 361 (377)
|+++.|+|++++||.|+||||+++|++ .|||+.|.|+...
T Consensus 233 ger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 233 GERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp TCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred CCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999999999998 5899999986544
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=5.5e-27 Score=216.11 Aligned_cols=218 Identities=17% Similarity=0.203 Sum_probs=150.3
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCC-----------
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQK----------- 96 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~----------- 96 (377)
-|+|+++.|++.++++.|... ....+...|..+.- +.||.+ +..-.|.|||.+..-.+++++
T Consensus 35 GP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~ 107 (276)
T 3kw8_A 35 GPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 107 (276)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCCC
Confidence 589999999999999999964 45667777765543 589987 345678999999988888652
Q ss_pred -CCceeEEeeccCCCC-CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCCCccccee
Q 017112 97 -PGRYFMAARPFNDAP-IPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRK 174 (377)
Q Consensus 97 -~g~y~l~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 174 (377)
.|.||-......... .........+.|....... . ..|++
T Consensus 108 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~--~------------------------------------~~drE 149 (276)
T 3kw8_A 108 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--V------------------------------------LPDAT 149 (276)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--C------------------------------------CCSEE
T ss_pred CCEEEEEecCccccccchhhhhCccEEEEEEecCCC--c------------------------------------ccccc
Confidence 355665544311000 0000001122222221100 0 01334
Q ss_pred EEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccCcCCceee
Q 017112 175 LFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRL 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 254 (377)
+.+.++ .|+|||+.|. ..+.
T Consensus 150 ~~l~l~---------------~~~iNG~~~~---------------------------------------------~~p~ 169 (276)
T 3kw8_A 150 HTIVFN---------------DMTINNRKPH---------------------------------------------TGPD 169 (276)
T ss_dssp EEEEEE---------------TTEETTCCTT---------------------------------------------CCCC
T ss_pred eEEEec---------------ccccceeccc---------------------------------------------CCCC
Confidence 444332 1678887661 1235
Q ss_pred eeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC--
Q 017112 255 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD-- 332 (377)
Q Consensus 255 ~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d-- 332 (377)
+.++.|++|+|+|+|.+ ...||||||||.|++++.| .++.. ...+.+|||+.|.+++++.++|+++
T Consensus 170 i~v~~G~~vri~l~N~~---~~~Hp~HlHG~~f~v~~~G--~~~~p-------~~~~~~~Dtv~v~pg~~~~~~~~~~~~ 237 (276)
T 3kw8_A 170 FEATVGDRVEIVMITHG---EYYHTFHMHGHRWADNRTG--ILTGP-------DDPSRVIDNKITGPADSFGFQIIAGEG 237 (276)
T ss_dssp EEEETTCEEEEEEEEES---SCCEEEEETTCCEESSSSS--SCCST-------TCCCCEESEEEECTTCEEEEEEETTTT
T ss_pred EEEecCCEEEEEEecCC---CcceeEEEccceeEEeccC--ccCCC-------cccccCCccEEeCCCceEEEEEEeccC
Confidence 78999999999999986 3589999999999997543 22211 1234699999999999999999997
Q ss_pred -CceeeEeeechHHHHhccceeEEEEeCCCC
Q 017112 333 -NPGVWFMHCHLELHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 333 -~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~ 362 (377)
|||.|+||||+++|++.|||+.|+|.++++
T Consensus 238 ~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 238 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 899999999999999999999999987644
No 24
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.94 E-value=5.5e-26 Score=211.56 Aligned_cols=218 Identities=18% Similarity=0.283 Sum_probs=144.2
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCC------------
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ------------ 95 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~------------ 95 (377)
-|+|+++.|++.+++|.|.... ...+...|..+. -+.||.++. .-.|.|||.+.--.++.+
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 5899999999999999998753 456777776543 257998652 234789999887777652
Q ss_pred CCCceeEEeeccCCCCCCCC-CcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCCCccccee
Q 017112 96 KPGRYFMAARPFNDAPIPVD-NKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRK 174 (377)
Q Consensus 96 ~~g~y~l~~~~~~~~~~~~~-~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 174 (377)
..|.||-............+ .....+.|....... ...|++
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~--------------------------------------~~~d~e 171 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD--------------------------------------LLPKRQ 171 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------------------------------------CCCSEE
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEecccc--------------------------------------cCcccc
Confidence 23556654432111000000 000112222211000 012444
Q ss_pred EEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccCcCCceee
Q 017112 175 LFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRL 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 254 (377)
+.+.++. |.+|++.+ ...+.
T Consensus 172 ~~l~~~~---------------~~~Ng~~~---------------------------------------------~~~p~ 191 (299)
T 3t9w_A 172 FTVVFND---------------MMINNRAH---------------------------------------------HDAPT 191 (299)
T ss_dssp EEEEEET---------------TEETTCCT---------------------------------------------TCCCE
T ss_pred ceeeeee---------------eeecCccc---------------------------------------------ccccc
Confidence 4444321 56676554 11245
Q ss_pred eeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEE---Ec
Q 017112 255 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRF---RA 331 (377)
Q Consensus 255 ~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~---~~ 331 (377)
+.++.|++|+|+|+|.+ ...||||||||.|+|+..+... .....+.++||+.|.|++...+++ ++
T Consensus 192 l~v~~Ge~Vr~~liN~~---~~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe~~~~~via~~~ 259 (299)
T 3t9w_A 192 FEANLGERVEWIAIGHG---SNFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGVSFGFQVIAGEG 259 (299)
T ss_dssp EEEETTCEEEEEEEEES---SCCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTCEEEEEEETTTT
T ss_pred ceecCCCEEEEEEEecc---ccceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCceeEEEEEEEeeC
Confidence 78899999999999986 4579999999999998775321 223345689999999998776555 56
Q ss_pred CCceeeEeeechHHHHhccceeEEEEeCCCC
Q 017112 332 DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 332 d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~ 362 (377)
+|||.|+||||+++|++.|||++|+|++++.
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 7999999999999999999999999987754
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=1.4e-25 Score=210.33 Aligned_cols=99 Identities=21% Similarity=0.293 Sum_probs=83.5
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEc--
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA-- 331 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~-- 331 (377)
.+.++.|++|+|+|.|.+ ...||||||||.|+|++.+... .....+.++||+.|.|++.+.+++.+
T Consensus 175 ~l~v~~Ge~vr~~liN~g---~~~hpfHlHGh~F~v~~~~~~~---------~~~~~~~~~Dtv~l~Pger~~v~v~a~~ 242 (313)
T 3tas_A 175 DFEATVGDRVEFVMITHG---EYYHTFHLHGHRWADNRTGMLT---------GPDDPSQVIDNKICGPADSFGFQVIAGE 242 (313)
T ss_dssp CEEEETTCEEEEEEEEES---SCCEEEEETTCCEESSTTSSCC---------STTCCCCEESEEEECTTCEEEEEEETTT
T ss_pred ccccccCCEEEEEEeccc---ccceeeeecCCeeEEEEECCcc---------CCCCCCeeeeEEEeCCCcceEEEEEecc
Confidence 578889999999999986 4589999999999998765221 12245779999999999999888864
Q ss_pred -CCceeeEeeechHHHHhccceeEEEEeCCCCCC
Q 017112 332 -DNPGVWFMHCHLELHTGWGLKTAFAVEDGPGPD 364 (377)
Q Consensus 332 -d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~~~ 364 (377)
+|||.|+||||+++|++.|||++|.|++++...
T Consensus 243 ~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~~ 276 (313)
T 3tas_A 243 GVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTI 276 (313)
T ss_dssp TTCSEEEEEEECSHHHHHTTCEEEEEEECTTCCC
T ss_pred CCCCEeEEEEeCChHHHHCCCeEEEEEECCCCCC
Confidence 689999999999999999999999999876543
No 26
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.91 E-value=5.5e-25 Score=227.39 Aligned_cols=88 Identities=14% Similarity=0.244 Sum_probs=78.6
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++++|+|.|.+.. ...||||||||.|+|+ +.++|||.|.||+.+.|.|++|+
T Consensus 627 ~l~v~~Ge~vr~rliN~g~~-~~~h~~HlhGh~f~v~--------------------~~~~Dtv~l~Pg~~~~v~~~ad~ 685 (742)
T 2r7e_A 627 QLSVCLHEVAYWYILSIGAQ-TDFLSVFFSGYTFKHK--------------------MVYEDTLTLFPFSGETVFMSMEN 685 (742)
T ss_dssp CCCCCSSCCCEEEEEECSSC-CCCCCCEESSSCCCCB--------------------SSSBCSSCCCCCSSEECCEECCC
T ss_pred cEEEeCCCEEEEEEEeCCCC-cceEEEEEcCcEEEEe--------------------ccceeEEEECCCcEEEEEEEcCC
Confidence 37889999999999997532 3469999999999986 23899999999999999999999
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCCCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~ 362 (377)
||.|+||||+++|++.|||++|.|.++..
T Consensus 686 pG~w~~hcH~~~H~~~GM~~~~~V~~~~~ 714 (742)
T 2r7e_A 686 PGLWILGCHNSDFRNRGMTALLKVSSCDK 714 (742)
T ss_dssp CCCSCCEECCCSTTHHHHSCCCCCCCCCC
T ss_pred CeEEEEEeCCchHHhCCCeEEEEEEeCCC
Confidence 99999999999999999999999987654
No 27
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.91 E-value=7e-26 Score=211.82 Aligned_cols=231 Identities=11% Similarity=0.024 Sum_probs=130.2
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC----ceEecEEEeCCCCEEEEEEEeCCCC------
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK----PFTTEAILIAPGQTTNVLVQANQKP------ 97 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~----P~~v~~l~l~~GqR~dvlv~~~~~~------ 97 (377)
.|+|++++|+++|+||+|... ..+.|...|..+. .+.||.+.. ++..+...|.||||++..+++++..
T Consensus 59 GP~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d 136 (306)
T 1sdd_A 59 GPTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDD 136 (306)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSS
T ss_pred CCEEEEeCCCEEEEEEEECCC-CcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCC
Confidence 589999999999999999764 4555666665532 268998762 2344467899999999999997643
Q ss_pred ---CceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCCCccccee
Q 017112 98 ---GRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRK 174 (377)
Q Consensus 98 ---g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 174 (377)
|.||..+........ ...+. .+++.......... +.....+. ++.... .+
T Consensus 137 ~~~GT~wYHsH~~~~~q~-~~GL~-G~liV~~~~~~~~~---~~~~~~d~-----------------e~~l~~---~d-- 189 (306)
T 1sdd_A 137 PPCLTHIYYSYVNLVEDF-NSGLI-GPLLICKKGTLTED---GTQKMFEK-----------------QHVLMF---AV-- 189 (306)
T ss_dssp CSEEEEEEECCSSSHHHH-HTTCC-EEEEEECTTCBCTT---SSBSSSCC-----------------CCCCBC---CE--
T ss_pred CCceEEEEeccCCchhhh-ccCce-EEEEEccCCCCCcc---CCcCcccc-----------------eEEEEE---Ee--
Confidence 599998763210000 01122 24454432211100 00000000 000000 00
Q ss_pred EEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccCcCCceee
Q 017112 175 LFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRL 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 254 (377)
+...... .......++|||+.+. ..+.
T Consensus 190 --~d~~~~~------~~~~~~~~~ING~~~~---------------------------------------------~~p~ 216 (306)
T 1sdd_A 190 --FDESKSW------NQTSSLMYTVNGYVNG---------------------------------------------TMPD 216 (306)
T ss_dssp --EETTSSS------SCCCCEEECSSSCCSS---------------------------------------------CCCC
T ss_pred --ccccccc------ccCCCcceeeCCEecC---------------------------------------------CCcc
Confidence 0000000 0001123567776541 0123
Q ss_pred eeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCCc
Q 017112 255 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 334 (377)
Q Consensus 255 ~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~p 334 (377)
+.++.|++++|+|.|.+.. ...|+||||||.|++ .| .++||+.|.||+++.++|++++|
T Consensus 217 l~v~~G~~vrlrliN~g~~-~~~h~~hlhG~~~~~----dG----------------~~~dtv~l~pger~~v~~~~~~p 275 (306)
T 1sdd_A 217 ITVCAHDHISWHLIGMSSG-PELFSIHFNGQVLEQ----NH----------------HKISAITLVSATSTTANMTVSPE 275 (306)
T ss_dssp CCCCCC------BBCCCSS-SCEECCBCSSTTCEE----TT----------------EECSCCCEETTCCBC--------
T ss_pred eEEcCCCEEEEEEEeCCCC-CccEEEEECCcEeee----CC----------------EEcceEEECCCcEEEEEEEcCCC
Confidence 6678899999999998632 246999999999986 11 26899999999999999999999
Q ss_pred eeeEeeechHHHHhccceeEEEEeCCC
Q 017112 335 GVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 335 G~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
|.|+||||+++|++.|||++|.|.++.
T Consensus 276 G~~~~hch~~~H~~~GM~~~~~V~~~~ 302 (306)
T 1sdd_A 276 GRWTIASLIPRHFQAGMQAYIDIKNCA 302 (306)
T ss_dssp CCCCCBCCSTTTGGGTCBCCC------
T ss_pred eEEEEEeCChHHHhcCCeEEEEEecCC
Confidence 999999999999999999999998654
No 28
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.90 E-value=2.3e-24 Score=231.36 Aligned_cols=92 Identities=20% Similarity=0.442 Sum_probs=82.5
Q ss_pred eeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEc
Q 017112 252 TRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA 331 (377)
Q Consensus 252 ~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~ 331 (377)
...+.++.|++|+|+|.|.+. ....||||||||.|+|++++ |.|||||.|+++++++|+|++
T Consensus 969 ~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~a 1030 (1065)
T 2j5w_A 969 LQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFP 1030 (1065)
T ss_dssp CCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT-----------------CEEESEEEECTTCEEEEEECC
T ss_pred CccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC-----------------CceeeEEEECCCCeEEEEEEC
Confidence 346789999999999999752 24689999999999998652 679999999999999999999
Q ss_pred CCceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 332 DNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 332 d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
||||.|+||||+++|++.|||++|.|.++.
T Consensus 1031 d~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1031 RTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp CSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred CCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 999999999999999999999999998654
No 29
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.90 E-value=2.1e-22 Score=216.11 Aligned_cols=100 Identities=13% Similarity=0.205 Sum_probs=81.3
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 86 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~-~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR 86 (377)
++.++|||+.. ...+.++|++|++|||||||+|+. ..+.|+|+||+|+ ++|+.+++|.|+||||
T Consensus 257 ~~~~~iNG~~~-------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer 321 (1065)
T 2j5w_A 257 NRMYSVNGYTF-------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATL 321 (1065)
T ss_dssp TEEEEETTEET-------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCE
T ss_pred CcEEEECCccC-------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcE
Confidence 45789999861 125689999999999999999986 6899999999999 4789999999999999
Q ss_pred EEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCC
Q 017112 87 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGI 128 (377)
Q Consensus 87 ~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~ 128 (377)
|||+|++++ +|+|++++...... .....+.+++.+.
T Consensus 322 ~dVlv~~~~-pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~ 357 (1065)
T 2j5w_A 322 FDAYMVAQN-PGEWMLSCQNLNHL-----KAGLQAFFQVQEC 357 (1065)
T ss_dssp EEEEEECCS-CEEEEEEECSHHHH-----HTTCEEEEEEECS
T ss_pred EEEEEEeCC-CeeEEEEecCcchh-----hCCCEEEEEEecC
Confidence 999999987 79999988754211 0124567777654
No 30
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=9.6e-22 Score=201.79 Aligned_cols=248 Identities=15% Similarity=0.205 Sum_probs=141.1
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC---c-eEecEEEeCCCCEEEEEEEeCCC-----CC
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK---P-FTTEAILIAPGQTTNVLVQANQK-----PG 98 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~---P-~~v~~l~l~~GqR~dvlv~~~~~-----~g 98 (377)
.|+|++++|+++++||.|.... ...|...|.... .+.||.+.. | ..+....|.|||+++..+++++. +|
T Consensus 68 GP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G 145 (647)
T 1sdd_B 68 GPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPG 145 (647)
T ss_dssp CCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSSS
T ss_pred CceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCC
Confidence 5899999999999999999863 455666665543 578998753 2 23456789999999999999874 47
Q ss_pred ----ceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCCCccccee
Q 017112 99 ----RYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVPQKVDRK 174 (377)
Q Consensus 99 ----~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~~~~ 174 (377)
.||......... .-...+ ..++|.......... +..|. .+.+...-+. .+....+..+.... .
T Consensus 146 ~~c~T~wYHsH~~~~~-q~~~GL-~G~lIV~~~~~~~~~---~~~~~-~~~e~~l~l~-~~d~~~~w~~~~~~------~ 212 (647)
T 1sdd_B 146 SACRAWAYYSAVNPEK-DIHSGL-IGPLLICRKGTLDKE---TNMPV-DMREFVLLFM-VFDEKKSWYYDKKP------T 212 (647)
T ss_dssp CSEEEEEEECCSSHHH-HHTTTC-EEEEEEECTTSSCTT---SCCCS-SCCEEEEEEE-EEEGGGSSCCC----------
T ss_pred CCceEEEEccCCCCcc-cccccC-ccCEEEeeCCCcccc---cCCCC-cceeEEEEEE-eecCccccccccCc------c
Confidence 899987642100 000112 223444432211100 00111 0000000000 00000000000000 0
Q ss_pred EEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccCcCCceee
Q 017112 175 LFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLGTSRATRL 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 254 (377)
..+.. ... . .......+.|||+.+ ..+.
T Consensus 213 ~~~~~-~~~----~-~~~~~~~~~iNG~~~----------------------------------------------~~p~ 240 (647)
T 1sdd_B 213 RSWRR-ASS----E-VKNSHEFHAINGMIY----------------------------------------------NLPG 240 (647)
T ss_dssp -----------------CCCEEEEETTBSS----------------------------------------------CCCC
T ss_pred ccccc-CCc----c-hhhcCceeccCCEec----------------------------------------------CCCC
Confidence 00000 000 0 000011245555443 0134
Q ss_pred eeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCCc
Q 017112 255 SKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADNP 334 (377)
Q Consensus 255 ~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~p 334 (377)
+.++.|++++|+|.|.+.. ...|+||+|||.|+|++. ++.++||+.|.||++++|+|++++|
T Consensus 241 l~v~~G~~vrlrliN~~~~-~~~h~~hlhG~~f~vi~~-----------------d~~~~d~v~l~pg~r~~v~~~~~~p 302 (647)
T 1sdd_B 241 LRMYEQEWVRLHLLNLGGS-RDIHVVHFHGQTLLENGT-----------------QQHQLGVWPLLPGSFKTLEMKASKP 302 (647)
T ss_dssp CEEETTCEEEEEEEECCCT-TCCEEEEETTCCEEECSS-----------------SCEEESSEEECTTEEEEEEEECCSS
T ss_pred eEEcCCCEEEEEEEeCCCC-CcceeEEEcCcEEEEecC-----------------CCcccceEEECCCeEEEEEEEeccc
Confidence 7788999999999998631 347999999999999864 2458999999999999999999999
Q ss_pred eeeEeeechHHHHhccceeEEEEeCC
Q 017112 335 GVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 335 G~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
|.|+||||+.+|++.|||++|.|.+.
T Consensus 303 G~w~~hch~~~h~~~Gm~~~~~V~~~ 328 (647)
T 1sdd_B 303 GWWLLDTEVGEIQRAGMQTPFLIVDR 328 (647)
T ss_dssp EEEEEECCCHHHHTTTCEEEEEEECT
T ss_pred eEeecccCcccccccccccceeeecc
Confidence 99999999999999999999999753
No 31
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.87 E-value=5.3e-21 Score=181.56 Aligned_cols=93 Identities=23% Similarity=0.279 Sum_probs=77.3
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCC--ccceeeeCCCCEEEEEEE
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI--ERNTAAVPTGGWTAIRFR 330 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~--~rDtv~v~~~~~~~i~~~ 330 (377)
+.+.++.|++++|++.|.+ ...|++|+|||.|+|++. |.+ .+++ ++||+.|.+|+++.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~---~~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQAN---RDTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCC---CccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 4678899999998877754 457888999999999863 321 1222 579999999999999999
Q ss_pred cCCceeeEeeechH-HHHhccceeEEEEeCCC
Q 017112 331 ADNPGVWFMHCHLE-LHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 331 ~d~pG~w~~HCHi~-~H~~~Gm~~~~~v~~~~ 361 (377)
+++||.|+||||++ +|++.|||+.|.|+...
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 99999999999999 59999999999998644
No 32
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=3e-21 Score=182.05 Aligned_cols=249 Identities=17% Similarity=0.156 Sum_probs=154.8
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEE
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 87 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~-~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~ 87 (377)
..+++||+.. .|+|+|++|+++|+|++|.... ....+.+.|. .+.||.+. ...|.|||++
T Consensus 59 ~~~~~ng~~p---------gP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~----~~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDVP---------GRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAA----TGQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCccC---------CCeEEEeCCCEEEEEEEECCCCCCceeeEeCcc----ccCCCCCc------ceeecCCCEE
Confidence 4578888742 5899999999999999999753 4556666664 26788753 1248999999
Q ss_pred EEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCC
Q 017112 88 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 167 (377)
Q Consensus 88 dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 167 (377)
+..+++++ +|.||................ ..+++... ... .|..+.. ... .+...... ...
T Consensus 120 ~y~f~~~~-~Gt~wyH~h~~~~~~~~~~Gl-~G~~iV~~-~~~--------~p~~d~e-~~l----~~~d~~~~---~~~ 180 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCAVAPVGMHIANGM-YGLILVEP-KEG--------LPKVDKE-FYI----VQGDFYTK---GKK 180 (327)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHTTC-EEEEEEEC-TTC--------CCCCSEE-EEE----EEEEECBS---SCT
T ss_pred EEEEECCC-CeEEEEEeCCCChhhhhhcce-EEEEEEec-CCC--------CCCCceE-EEE----Eeeeeecc---Ccc
Confidence 99999987 799999865321000000111 22344433 210 1111110 000 00000000 000
Q ss_pred CcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccC
Q 017112 168 PQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLG 247 (377)
Q Consensus 168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 247 (377)
.......+... ...+.....+.|||+.+.
T Consensus 181 --~~~g~~~~~~~-------~~~~~~~~~~~iNG~~~~------------------------------------------ 209 (327)
T 1kbv_A 181 --GAQGLQPFDMD-------KAVAEQPEYVVFNGHVGA------------------------------------------ 209 (327)
T ss_dssp --TCCEEECBCHH-------HHHHTCCSEEEETTSTTT------------------------------------------
T ss_pred --ccccccccChh-------HhccCCCceEEEcCcccC------------------------------------------
Confidence 00000000000 000000112455655431
Q ss_pred cCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEE
Q 017112 248 TSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 327 (377)
Q Consensus 248 ~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i 327 (377)
.. +...+.++.|++++|+|.|.+. ...|+||||||.|+|++...+. ..|.++|++.|.+|+++.|
T Consensus 210 ~~-~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pGer~dv 274 (327)
T 1kbv_A 210 LT-GDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAGGSAIV 274 (327)
T ss_dssp TS-GGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEE
T ss_pred CC-CceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCCCEEEE
Confidence 00 1235788999999999999863 3579999999999999885331 1267899999999999999
Q ss_pred EEEcCCceeeEeeechHHHH-hccceeEEEEeCCC
Q 017112 328 RFRADNPGVWFMHCHLELHT-GWGLKTAFAVEDGP 361 (377)
Q Consensus 328 ~~~~d~pG~w~~HCHi~~H~-~~Gm~~~~~v~~~~ 361 (377)
.|++++||.|++|||+.+|. ..||++.+.|+...
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 99999999999999999995 88999999997543
No 33
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.84 E-value=7.9e-22 Score=204.21 Aligned_cols=88 Identities=19% Similarity=0.260 Sum_probs=78.3
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
..+.++.|++++|+|.|.+.. ...||||||||.|+|++.+ +.++||+.|.||+++.|+|+++
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~~-~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGSN-ENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCSS-SCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCS
T ss_pred CCeEEeCCCEEEEEEEeCCCC-cceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeC
Confidence 346788999999999998632 3479999999999998763 1389999999999999999999
Q ss_pred CceeeEeeechHHHHhccceeEEEEe
Q 017112 333 NPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
+||.|+||||+++|++.|||+.|.|.
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCCceEEEeccccccccccccccccc
Confidence 99999999999999999999999984
No 34
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.82 E-value=2.2e-18 Score=163.04 Aligned_cols=94 Identities=22% Similarity=0.222 Sum_probs=74.2
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCC-ccceeeeCCCCEEEEEEEc
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI-ERNTAAVPTGGWTAIRFRA 331 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~-~rDtv~v~~~~~~~i~~~~ 331 (377)
..+.++.|++++|++.|.+ ...|.+++|+|.|+|++. |.+. ..|. ++||+.|.+|+.+.+.|.+
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~---~~~~~h~i~~h~~~Vi~d--G~~~----------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPN---RDSRPHLIGGHGDLVWET--GKFH----------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEEETCCEEEEETT--CCTT----------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred cceEecCCCEEEEEECCCC---CccccEEECCCCeEEEeC--Cccc----------CCCccCcceEEECCCceEEEEEEc
Confidence 4578899999998877653 223445577888998862 3221 1122 6899999999999999999
Q ss_pred CCceeeEeeechHHHH-hccceeEEEEeCCC
Q 017112 332 DNPGVWFMHCHLELHT-GWGLKTAFAVEDGP 361 (377)
Q Consensus 332 d~pG~w~~HCHi~~H~-~~Gm~~~~~v~~~~ 361 (377)
++||.|+||||++.|+ +.|||++|.|....
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 9999999999999997 99999999998643
No 35
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.81 E-value=6.7e-21 Score=196.93 Aligned_cols=89 Identities=15% Similarity=0.218 Sum_probs=79.4
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++++|+|+|.+.. ...|+||||||.|+|++. ++||+.|.|+++++++|++++
T Consensus 245 ~l~v~~Ge~vrlrliN~g~~-~~~h~~hlhGh~f~Vvg~--------------------~~Dtv~v~Pg~~~~v~~~~~~ 303 (742)
T 2r7e_A 245 GLIGCHRKSVYWHVIGMGTT-PEVHSIFLEGHTFLVRNH--------------------RQASLEISPITFLTAQTLLMD 303 (742)
T ss_dssp CCEECSSSCEEEECCCCCSS-SCCCCCCCTTCCCEETTE--------------------ECCSCCCCTTCCCEEEECCCS
T ss_pred ceEEcCCCEEEEEEEeCCCC-CcceEEEECCCEEEEEeE--------------------ecceEEeCCCcEEEEEEEeCC
Confidence 57889999999999998632 237999999999999743 589999999999999999999
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCCCCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDGPGP 363 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~~ 363 (377)
||.|+||||+++|++.|||+.|.|..+..+
T Consensus 304 pG~w~~hCH~~~H~~~GM~~~~~V~~~~~~ 333 (742)
T 2r7e_A 304 LGQFLLFCHISSHQHDGMEAYVKVDSCPEE 333 (742)
T ss_dssp CSEECCCCCSSSSSTTSCCBCEEECCCCCC
T ss_pred CeeEEEEeCChhHHhCCCeEEEEEecCCcc
Confidence 999999999999999999999999876543
No 36
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.78 E-value=1.2e-17 Score=164.28 Aligned_cols=234 Identities=16% Similarity=0.178 Sum_probs=141.4
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEE
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTN 88 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~d 88 (377)
+.++|||+. .+.|+|++|+++|||++|.+... +.+.++++... ..+.|+||||++
T Consensus 45 ~~~~vNG~~----------~p~i~v~~Gd~v~~~~~N~~~~~-h~~~~~g~~~~--------------~~~~i~pG~~~~ 99 (447)
T 2dv6_A 45 VGGDIDHKI----------NPTLVVHEGETVQVNLVNGEGAQ-HDVVVDQYAAR--------------SAIVNGKNASST 99 (447)
T ss_dssp ESGGGTTCB----------SCCEEEETTCEEEEEEECSSSSC-BCCEETTTTEE--------------CCCBCSTTBEEE
T ss_pred cceeecCCc----------CCeEEEcCCCEEEEEEEcCCCCc-eEEEEccCCcc--------------cceecCCCCeEE
Confidence 445677775 58999999999999999999876 66777776422 457799999999
Q ss_pred EEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCCC
Q 017112 89 VLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADVP 168 (377)
Q Consensus 89 vlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p 168 (377)
+.+++++ +|.||........ ......+.|...+........ ..... .+....+|....
T Consensus 100 ~~f~~~~-~Gt~~y~~~~~~h-----~~~Gm~G~i~V~~~~~~~~~~--~~~~~--------------~~~~~~~p~~~d 157 (447)
T 2dv6_A 100 FSFVASK-VGEFNYYCSIAGH-----RQAGMEGNIQVLPGNRAEMKS--SGADI--------------TRDPADLPGPIG 157 (447)
T ss_dssp EEEECCS-CEEEEEECCSTTH-----HHHTCEEEEEEESSCCCCCCC--SSBCC--------------BCCTTCSCCCCC
T ss_pred EEEEcCC-CEEEEEEeCCCCh-----hhCCCEEEEEEeCCccccCCC--cchhh--------------ccChhhcCCccc
Confidence 9999987 6999987652110 000123445554432211100 00000 000011111100
Q ss_pred cccceeEEEEeccCCCCCCcccCC-ceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccC
Q 017112 169 QKVDRKLFYTIGFGKDSCPTCVNG-TRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLG 247 (377)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 247 (377)
........+.+....... ...+| ....|.+||+.-
T Consensus 158 ~~~~~~~~~~l~~~~~~~-~~~~g~~~~~~~~NG~~p------------------------------------------- 193 (447)
T 2dv6_A 158 PRQAKTVRIDLETVEVKG-QLDDNTTYTYWTFNGKVP------------------------------------------- 193 (447)
T ss_dssp SCCCCEEEEEEEEEEEEE-EEETTEEEEEEEETTBBS-------------------------------------------
T ss_pred cCCCcEEEEEEEEEEEEE-eccCCceeEEEEECCccC-------------------------------------------
Confidence 001111222211100000 00011 112244444310
Q ss_pred cCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEE
Q 017112 248 TSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 327 (377)
Q Consensus 248 ~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i 327 (377)
.+.+.++.|++++|+|.|... ....|++|+||.. .. .| ..+++.|.+|++..+
T Consensus 194 ----gp~i~v~~G~~v~~rl~N~~~-~~~~~~ih~Hg~~----~~-DG-----------------~~~~~~i~pG~~~~~ 246 (447)
T 2dv6_A 194 ----GPFLRVRVGDTVELHLKNHKD-SLMVHSVDFHGAT----GP-GG-----------------AAAFTQTDPGEETVV 246 (447)
T ss_dssp ----CCCEEEETTCEEEEEEEECTT-CSSCBCCEETTCC----SG-GG-----------------GGGGCCBCTTCEEEE
T ss_pred ----CCeEEecCCCEEEEEEEeCCC-CceeEEEeecccc----CC-CC-----------------CCccEEeCCCCEEEE
Confidence 135788999999999999852 2357999999953 11 11 125667999999999
Q ss_pred EEEcCCceeeEeeech---HHHHhccceeEEEEeCC
Q 017112 328 RFRADNPGVWFMHCHL---ELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 328 ~~~~d~pG~w~~HCHi---~~H~~~Gm~~~~~v~~~ 360 (377)
+|+++++|.|.||||. ..|...||++.++|.+.
T Consensus 247 ~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~ 282 (447)
T 2dv6_A 247 TFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPE 282 (447)
T ss_dssp EEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECT
T ss_pred EEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCC
Confidence 9999999999999995 58999999999999754
No 37
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.78 E-value=2.3e-17 Score=156.21 Aligned_cols=107 Identities=20% Similarity=0.269 Sum_probs=80.7
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCC--ccceeeeCCCCEEEEEEE
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPI--ERNTAAVPTGGWTAIRFR 330 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~--~rDtv~v~~~~~~~i~~~ 330 (377)
+.+.++.|++++|+..+.+ ...+++++|||.|.|+. .|.+ .+|. +.||+.|.+|+++.+.|.
T Consensus 225 ~~l~v~~GervRlin~~~~---~~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~~~dtv~i~pGer~dvlv~ 288 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQAN---RDTRPHLIGGHGDWVWE--TGKF-----------ANPPQRDLETWFIRGGSAGAALYT 288 (336)
T ss_dssp GCEEEETTCEEEEEEEESS---SCBCEEETTCCEEEEET--TCCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEcCCCCEEEEEecCCC---CccceEEECCcCceEeC--CCcC-----------cCCccccceEEEECCCCcEEEEEE
Confidence 4688999999998655543 23456667999999985 3321 1222 579999999999999999
Q ss_pred cCCceeeEeeechHHHH-hccceeEEEEeCCCCC-CCCCCCCCCCCC
Q 017112 331 ADNPGVWFMHCHLELHT-GWGLKTAFAVEDGPGP-DQSVLPPPTDLP 375 (377)
Q Consensus 331 ~d~pG~w~~HCHi~~H~-~~Gm~~~~~v~~~~~~-~~~~~~~~~~~~ 375 (377)
+++||.|+||||.+.|. +.||+++|.|+....+ .......|..+|
T Consensus 289 ~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~~~~~~~~~~~~~~ 335 (336)
T 1oe1_A 289 FKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWNDDLMKQIKAPAPIP 335 (336)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCTTTCCCSSCSCCCC
T ss_pred cCCCceEEEEechhhccccCCCeEEEEECCCCChHHhccCCCCCCCC
Confidence 99999999999999986 9999999999865432 223345566555
No 38
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.78 E-value=8.5e-18 Score=165.04 Aligned_cols=250 Identities=14% Similarity=0.147 Sum_probs=155.2
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCC-CCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEE
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAAL-NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 87 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~-~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~ 87 (377)
..+++||+.. .|+|+++.|+++|+|+.|... .....+.+.|+. ..||... ...|.||+++
T Consensus 49 ~~~~~ng~~p---------gp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 49 VFWSFGETVP---------GSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEETTBSS---------CCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEECCcCC---------CCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 4578899752 589999999999999999964 246677888864 4687643 2358999999
Q ss_pred EEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCC
Q 017112 88 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 167 (377)
Q Consensus 88 dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 167 (377)
++.+++++ +|.||.............. ...+.+.+..... .|..+. +... .+.+.. .....
T Consensus 110 ~y~f~~~~-~Gt~~yH~H~~~~~~~~~~--Gl~G~~iv~~~~~--------~~~~d~-e~~l----~l~d~~---~~~~~ 170 (442)
T 2zoo_A 110 TFNFKALN-PGLYIYHCATAPVGMHIAN--GMYGLILVEPKEG--------LAPVDR-EYYL----VQGDFY---TKGEF 170 (442)
T ss_dssp EEEEECCS-CEEEEEECCCSSHHHHHHT--TCEEEEEEECTTC--------CCCCSE-EEEE----EEEEEC---BSSCT
T ss_pred EEEEEcCC-CeEEEEecCCCChHHHHhC--ccEEEEEEeCCCC--------CCCCCc-eEEE----Eeeeee---ccCcc
Confidence 99999976 7999998742110000000 1233344432211 111111 0000 000000 00000
Q ss_pred CcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccC
Q 017112 168 PQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLG 247 (377)
Q Consensus 168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 247 (377)
.. .....+... ...+.....+.|||+.+..
T Consensus 171 ~~--~~~~~~~~~-------~~~~~~~~~~liNG~~~~~----------------------------------------- 200 (442)
T 2zoo_A 171 GE--AGLQPFDMA-------KAIDEDADYVVFNGSVGST----------------------------------------- 200 (442)
T ss_dssp TC--CEEECBCHH-------HHHTTCCSEEEETTSTTTT-----------------------------------------
T ss_pred cc--cccccCChh-------HhccCCCCEEEECCCcCCC-----------------------------------------
Confidence 00 000000000 0000111124455553300
Q ss_pred cCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEE
Q 017112 248 TSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 327 (377)
Q Consensus 248 ~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i 327 (377)
...+.+.++.|++++|+|.|.+. ...|+||+|||.|.|++...+. ..|.+.|++.|.+|++..+
T Consensus 201 --~~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~~------------~~p~~~~~~~l~pg~r~~v 264 (442)
T 2zoo_A 201 --TDENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGGS------------LKNHNVQTTLIPAGGAAIV 264 (442)
T ss_dssp --SGGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEE
T ss_pred --CCCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCcc------------CCCccceEEEECCCeeEEE
Confidence 01135788899999999999762 3579999999999999875321 1266899999999999999
Q ss_pred EEEcCCceeeEeeechHHH-HhccceeEEEEeCCCC
Q 017112 328 RFRADNPGVWFMHCHLELH-TGWGLKTAFAVEDGPG 362 (377)
Q Consensus 328 ~~~~d~pG~w~~HCHi~~H-~~~Gm~~~~~v~~~~~ 362 (377)
.|++++||.|++|||...| ...||++.|.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 9999999999999999999 5999999999976553
No 39
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.77 E-value=3e-19 Score=168.31 Aligned_cols=113 Identities=23% Similarity=0.277 Sum_probs=95.3
Q ss_pred CCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCE
Q 017112 7 MSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 86 (377)
Q Consensus 7 ~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR 86 (377)
.++.++|||+..... ..+.++|++|++|||||||+|+.+.+.|+|+||+|+||+.||++++|+.++++.|++|||
T Consensus 197 ~~~~~~iNG~~~~~~-----~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer 271 (327)
T 1kbv_A 197 QPEYVVFNGHVGALT-----GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGS 271 (327)
T ss_dssp CCSEEEETTSTTTTS-----GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEE
T ss_pred CCceEEEcCcccCCC-----CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCE
Confidence 578999999973211 136799999999999999999989999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCC
Q 017112 87 TNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 129 (377)
Q Consensus 87 ~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 129 (377)
|||++++++ +|+|+++......+ ......|+|+|++..
T Consensus 272 ~dv~v~~~~-pG~y~l~~h~~~~~----~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 272 AIVEFKVDI-PGNYTLVDHSIFRA----FNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEEEEECS-CEEEEEEESSTHHH----HHSSCEEEEEEESCC
T ss_pred EEEEEEeCC-CeEEEEEecccccc----ccCCcEEEEEECCCC
Confidence 999999997 69999998754321 012367999998653
No 40
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.66 E-value=1.4e-15 Score=143.96 Aligned_cols=114 Identities=21% Similarity=0.429 Sum_probs=91.1
Q ss_pred CCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC-ceEecEEEeCCCC
Q 017112 7 MSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK-PFTTEAILIAPGQ 85 (377)
Q Consensus 7 ~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~-P~~v~~l~l~~Gq 85 (377)
.++.++|||+.. .....++|++|++|||||+|++.. .+.|+|+||+|+||+.||.+++ |..++++.|+|||
T Consensus 164 ~~~~~~ING~~~-------~~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~ 235 (339)
T 2zwn_A 164 VADYFSVNAKSF-------PLTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGE 235 (339)
T ss_dssp CCCEEEETTBCT-------TSSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTC
T ss_pred ccceEEEccccC-------CCcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCC
Confidence 578999999862 113469999999999999999965 8899999999999999999995 8999999999999
Q ss_pred EEEEEEEeCCCCCceeEEeeccCCCCCC-CCCcceEEEEEEcCCC
Q 017112 86 TTNVLVQANQKPGRYFMAARPFNDAPIP-VDNKTATGILQYKGIP 129 (377)
Q Consensus 86 R~dvlv~~~~~~g~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 129 (377)
||||++++++ +|.|++.......+... .......++++|++..
T Consensus 236 r~~v~~~~~~-pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 236 RYDVIIEADN-PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEEEEECCS-CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEEEeCC-CeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999987 69988877644321111 0122357899998653
No 41
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.66 E-value=1.1e-16 Score=157.00 Aligned_cols=114 Identities=25% Similarity=0.295 Sum_probs=95.3
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCC
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQ 85 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~Gq 85 (377)
..++.+||||+.. |. ...+.|++++|++|||||+|+|..+.+.|+|+||+|+||+.||.+++|+.++++.|+|||
T Consensus 186 ~~~~~~liNG~~~----~~-~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~ 260 (442)
T 2zoo_A 186 EDADYVVFNGSVG----ST-TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGG 260 (442)
T ss_dssp TCCSEEEETTSTT----TT-SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTE
T ss_pred CCCCEEEECCCcC----CC-CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCe
Confidence 4579999999962 11 113689999999999999999998999999999999999999999999999999999999
Q ss_pred EEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCC
Q 017112 86 TTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 129 (377)
Q Consensus 86 R~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 129 (377)
|+||+|++++ +|.|+++....... ......++++|.+..
T Consensus 261 r~~v~v~~~~-~G~y~~~~~~~~~~----~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 261 AAIVEFKVEV-PGTFILVDHSIFRA----FNKGALAMLKVEGPD 299 (442)
T ss_dssp EEEEEEECCS-CEEEEEEESSTHHH----HTTSCEEEEEEESCC
T ss_pred eEEEEEEcCC-CCeEEEEecccccc----cccCceEEEEecCCC
Confidence 9999999986 69999998654321 022467899998654
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.65 E-value=2.2e-15 Score=141.15 Aligned_cols=116 Identities=22% Similarity=0.308 Sum_probs=92.0
Q ss_pred CCCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc-CceEecEEEeCC
Q 017112 5 PNMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT-KPFTTEAILIAP 83 (377)
Q Consensus 5 p~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v-~P~~v~~l~l~~ 83 (377)
...+|.++|||+.. .....++|++|++|||||+|++.. .+.|+|+||.|+||+.||.++ +|..+|++.|+|
T Consensus 161 ~~~~d~~~ING~~~-------~~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~p 232 (318)
T 3g5w_A 161 GDVFDYYTINAKSF-------PETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGP 232 (318)
T ss_dssp TCCCCEEEETTBCB-------TSSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECT
T ss_pred CCcCcEEEEcCcCC-------CCCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECC
Confidence 34689999999962 112459999999999999999976 678999999999999999998 899999999999
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCCC-CCCcceEEEEEEcCCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPIP-VDNKTATGILQYKGIP 129 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~-~~~~~~~ail~y~~~~ 129 (377)
|||+||++++++ +|.|.+......-.... .......++++|.+..
T Consensus 233 ger~~v~~~a~~-pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 233 GERYDVILNMDN-PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp TCEEEEEEECCS-CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred CCEEEEEEECCC-CeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999986 79998877643221100 0112356789998753
No 43
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.48 E-value=2e-13 Score=128.82 Aligned_cols=111 Identities=23% Similarity=0.275 Sum_probs=84.5
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC-ce-EecEEEeCC
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK-PF-TTEAILIAP 83 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~-P~-~v~~l~l~~ 83 (377)
..++.++|||+.+.+ ...+.++|++|++||||++|++....+.+ +++|.|+||+ ||.+++ |. .++++.|++
T Consensus 207 ~~~~~~~ING~~~~~-----~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~-i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~p 279 (333)
T 1mzy_A 207 LIPSHIVFNGAVGAL-----TGEGALKAKVGDNVLFVHSQPNRDSRPHL-IGGHGDLVWE-TGKFHNAPERDLETWFIRG 279 (333)
T ss_dssp TCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBCEEE-ETCCEEEEET-TCCTTSCCEEEESBCCBCT
T ss_pred cCCcEEEECCccccc-----CCCcceEecCCCEEEEEECCCCCccccEE-ECCCCeEEEe-CCcccCCCccCcceEEECC
Confidence 457999999996321 11467999999998887777665544533 8999999999 999996 44 489999999
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGI 128 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~ 128 (377)
|||+||+|++++ +|+|++........ ......++++|.+.
T Consensus 280 Ger~~v~v~a~~-pG~y~~~ch~~~h~----~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 280 GTAGAALYKFLQ-PGVYAYVNHNLIEA----VHKGATAHVLVEGE 319 (333)
T ss_dssp TEEEEEEEECCS-CEEEEEEESSHHHH----HTTCCEEEEEEESC
T ss_pred CceEEEEEEcCC-CEEEEEecChhhhH----hhCCCEEEEEEcCC
Confidence 999999999997 69999987754221 01235678999764
No 44
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.44 E-value=3.1e-13 Score=127.78 Aligned_cols=111 Identities=26% Similarity=0.301 Sum_probs=84.0
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEE-EEcCceEEEEEeCCCccCce--EecEEEeC
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFF-AIAGHNFTVVEVDAVYTKPF--TTEAILIA 82 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~-~idgh~~~VIa~DG~~v~P~--~v~~l~l~ 82 (377)
..++.++|||+.... . ..+.++|++|++|| |+|+++.+.+.| .|++|.|+||+ ||.+++|. .++.+.|+
T Consensus 207 ~~~~~~liNG~~~~~-~----~~~~l~v~~GervR--lin~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~ 278 (336)
T 1oe1_A 207 LTPSHIVFNGKVGAL-T----GANALTAKVGETVL--LIHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIR 278 (336)
T ss_dssp TCCSEEEETTSTTTT-S----GGGCEEEETTCEEE--EEEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBC
T ss_pred CCCCEEEECCeeccC-C----CCcceEcCCCCEEE--EEecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEEC
Confidence 467999999996321 1 14789999999766 567776666654 46999999997 99999764 36899999
Q ss_pred CCCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCC
Q 017112 83 PGQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 129 (377)
Q Consensus 83 ~GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 129 (377)
+||||||+|++++ +|+|++........ ......|+++|.+..
T Consensus 279 pGer~dvlv~~~~-pG~y~~~~h~~~~~----~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 279 GGSAGAALYTFKQ-PGVYAYLNHNLIEA----FELGAAGHIKVEGKW 320 (336)
T ss_dssp TTEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred CCCcEEEEEEcCC-CceEEEEechhhcc----ccCCCeEEEEECCCC
Confidence 9999999999997 79999988753211 012356889997643
No 45
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.41 E-value=7.3e-13 Score=125.38 Aligned_cols=112 Identities=22% Similarity=0.246 Sum_probs=81.7
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC-ce-EecEEEeCC
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK-PF-TTEAILIAP 83 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~-P~-~v~~l~l~~ 83 (377)
..++.++|||+.... ...+.++|++|++|||+++|++....+. .+++|.|+||+ ||.++. |. .++++.|++
T Consensus 213 ~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~~~~~~~-~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~p 285 (340)
T 2bw4_A 213 LTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQANRDTRPH-LIGGHGDYVWA-TGKFRNPPDLDQETWLIPG 285 (340)
T ss_dssp TCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBCEE-EETCCEEEEET-TCCTTSCCEEEESCCCBCT
T ss_pred CCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCCCccceE-EecCcceEEeC-CCcccCCccccceEEEeCC
Confidence 357899999996210 1147899999998876666554433332 38999999997 999985 54 589999999
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIP 129 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~ 129 (377)
||||||+|++++ +|+|++........ ......++++|.+..
T Consensus 286 Ger~~v~v~~~~-pG~y~~~~h~~~~h----~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 286 GTAGAAFYTFRQ-PGVYAYVNHNLIEA----FELGAAGHFKVTGEW 326 (340)
T ss_dssp TEEEEEEEECCS-CEEEEEEESSHHHH----HTTSCEEEEEEESCC
T ss_pred CceEEEEEECCC-CeeeEEEcCchHHH----HhCCCEEEEEECCCC
Confidence 999999999997 79999988654110 011245788887643
No 46
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.29 E-value=2.9e-12 Score=105.31 Aligned_cols=94 Identities=14% Similarity=0.198 Sum_probs=71.0
Q ss_pred eeeeccCceEEEEEeecCCCCCC-CCCeeecCCceEEEE------ecCC---CCCCCCCCCCCCCCCCCccceeeeCCCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVE-SHPFHLHGYNFFVVG------TGIG---NFDPVKYPANYNLVDPIERNTAAVPTGG 323 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~-~Hp~HlHg~~f~vl~------~g~g---~~~~~~~~~~~~~~np~~rDtv~v~~~~ 323 (377)
.+.++.|++|+|++.|.+ .. .|.||+|+....+.. ...+ .+.+.. ....++|+..|.+++
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~-------~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD-------KSNIIAESPLANGNE 105 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC-------CTTEEEECCCBCTTC
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCcc-------cccccccccccCCCC
Confidence 578999999999999975 34 799999986531100 0000 111100 123478999999999
Q ss_pred EEEEEEEcCCceeeEeeechHHHHhccceeEEEEe
Q 017112 324 WTAIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 324 ~~~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
...+.|.+++||.|.||||+..|.+ ||++.|.|+
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9999999999999999999999999 999999874
No 47
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.28 E-value=3.8e-12 Score=99.18 Aligned_cols=85 Identities=16% Similarity=0.225 Sum_probs=65.2
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEc-
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA- 331 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~- 331 (377)
+.+.++.|++|+|+ |.+ ...|++|+||..+... . |. + .+....++..+.+|+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~-~----------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE-L----------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH-H----------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc-c----------cccccccccccCCCCeEEEEEecC
Confidence 35789999999874 653 4689999999876431 0 00 0 00012478899999999999998
Q ss_pred CCceeeEeeechHHHHhccceeEEEEe
Q 017112 332 DNPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 332 d~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
++||.|.|||| .|...||++.|.|+
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999999985
No 48
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.26 E-value=8.6e-12 Score=127.85 Aligned_cols=87 Identities=15% Similarity=0.204 Sum_probs=75.8
Q ss_pred CCCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCC-eEEEEEcCceEEEEEeCCCccCceEecEEEeCCC
Q 017112 6 NMSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALND-ELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPG 84 (377)
Q Consensus 6 ~~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~-~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~G 84 (377)
..++.++|||+.. ..+.++|++|++|||||||+++.+ .+.|+++||.|+||+.|| ..++.+.|+||
T Consensus 224 ~~~~~~~iNG~~~--------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg 290 (647)
T 1sdd_B 224 NSHEFHAINGMIY--------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPG 290 (647)
T ss_dssp CCCEEEEETTBSS--------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTT
T ss_pred hcCceeccCCEec--------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCC
Confidence 3578999999961 147899999999999999999875 788999999999999885 57899999999
Q ss_pred CEEEEEEEeCCCCCceeEEeec
Q 017112 85 QTTNVLVQANQKPGRYFMAARP 106 (377)
Q Consensus 85 qR~dvlv~~~~~~g~y~l~~~~ 106 (377)
||+||++++++ +|.|.+....
T Consensus 291 ~r~~v~~~~~~-pG~w~~hch~ 311 (647)
T 1sdd_B 291 SFKTLEMKASK-PGWWLLDTEV 311 (647)
T ss_dssp EEEEEEEECCS-SEEEEEECCC
T ss_pred eEEEEEEEecc-ceEeecccCc
Confidence 99999999987 6998887654
No 49
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.26 E-value=2.6e-11 Score=111.96 Aligned_cols=88 Identities=23% Similarity=0.342 Sum_probs=71.5
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.++++.|++|++++.|.. ...|++|+||... ...+|. | ..+...|+||++.+.+|+++
T Consensus 66 P~i~~~~Gd~v~v~~~N~~---~~~~~iH~HG~~~---~~~DG~--------------p-~~~~~~i~PG~~~~y~f~~~ 124 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAG---AHPHTIHFHGVHR---ATMDGT--------------P-GIGAGSIAPGQSFTYEFDAT 124 (288)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCBCCEESSCCC---GGGSCC--------------T-TSTTCSBCTTCEEEEEEECC
T ss_pred CcEEEeCCCEEEEEEEeCC---CCcccEEeccccc---cccCCC--------------C-CccceeECCCCEEEEEEEcC
Confidence 4689999999999999975 5689999999862 111110 1 12446799999999999999
Q ss_pred CceeeEeeechH---HHHhccceeEEEEeCCC
Q 017112 333 NPGVWFMHCHLE---LHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 333 ~pG~w~~HCHi~---~H~~~Gm~~~~~v~~~~ 361 (377)
++|.|.||||.. .|...||++.++|++..
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~ 156 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKE 156 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSS
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCc
Confidence 999999999986 89999999999998654
No 50
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.16 E-value=1.7e-10 Score=112.73 Aligned_cols=77 Identities=14% Similarity=0.204 Sum_probs=65.2
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.| +++|+|.|.+. ...|.||++||.|+|++...+. +..|...|++.|.+|++..|.+++++
T Consensus 189 ~l~v~~g-~~RlRliN~~~--~~~~~~~i~gh~~~vi~~DG~~-----------~~~p~~~~~l~l~pgeR~dv~v~~~~ 254 (439)
T 2xu9_A 189 TLVAQKA-TLRLRLLNASN--ARYYRLALQDHPLYLIAADGGF-----------LEEPLEVSELLLAPGERAEVLVRLRK 254 (439)
T ss_dssp EEECSSS-EEEEEEEECCS--SCCEEEEETTBCEEEEEETTEE-----------EEEEEEESCEEECTTCEEEEEEECCS
T ss_pred cEEecCC-eEEEEEEecCC--CceEEEEECCceEEEEecCCCC-----------CCCceEeceEEECCceeEEEEEEcCC
Confidence 5788899 99999999873 4579999999999999985321 12456789999999999999999999
Q ss_pred ceeeEeeechH
Q 017112 334 PGVWFMHCHLE 344 (377)
Q Consensus 334 pG~w~~HCHi~ 344 (377)
+|.|.++|+..
T Consensus 255 ~G~~~l~~~~~ 265 (439)
T 2xu9_A 255 EGRFLLQALPY 265 (439)
T ss_dssp SEEEEEEEECC
T ss_pred CceEEEEeccc
Confidence 99999999854
No 51
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.08 E-value=6.4e-12 Score=117.04 Aligned_cols=84 Identities=15% Similarity=0.160 Sum_probs=57.4
Q ss_pred CCCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC-CeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCC
Q 017112 7 MSDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN-DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQ 85 (377)
Q Consensus 7 ~~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~-~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~Gq 85 (377)
.++.++|||+.. ...+.++|++|+++||||+|+++. ..+.|+|+||.|.+ || ..++++.|+|||
T Consensus 200 ~~~~~~ING~~~-------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l~pge 264 (306)
T 1sdd_A 200 SSLMYTVNGYVN-------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITLVSAT 264 (306)
T ss_dssp CCEEECSSSCCS-------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCEETTC
T ss_pred CCcceeeCCEec-------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEECCCc
Confidence 467899999862 124689999999999999999987 56679999999875 87 468999999999
Q ss_pred EEEEEEEeCCCCCceeEEeec
Q 017112 86 TTNVLVQANQKPGRYFMAARP 106 (377)
Q Consensus 86 R~dvlv~~~~~~g~y~l~~~~ 106 (377)
|+||++++++ +|.|++....
T Consensus 265 r~~v~~~~~~-pG~~~~hch~ 284 (306)
T 1sdd_A 265 STTANMTVSP-EGRWTIASLI 284 (306)
T ss_dssp CBC---------CCCCCBCCS
T ss_pred EEEEEEEcCC-CeEEEEEeCC
Confidence 9999999986 6998887654
No 52
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.03 E-value=4.6e-10 Score=104.76 Aligned_cols=87 Identities=16% Similarity=0.233 Sum_probs=72.8
Q ss_pred EEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc---CceEecEEEeCCCCEE
Q 017112 11 HTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT---KPFTTEAILIAPGQTT 87 (377)
Q Consensus 11 ~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v---~P~~v~~l~l~~GqR~ 87 (377)
+.+||+.. ...+.+.++.|+++||||+|++.. ...|.|.||.|+|++.||... .|..+|++.|.||||+
T Consensus 163 ~t~Ng~~~-------~~~~~l~v~~Ge~vr~~liN~g~~-~hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~ 234 (313)
T 3tas_A 163 MTINNRPA-------HTGPDFEATVGDRVEFVMITHGEY-YHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSF 234 (313)
T ss_dssp TEETTCCT-------TCCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEE
T ss_pred hhcccCCc-------ccccccccccCCEEEEEEeccccc-ceeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcce
Confidence 35677752 235789999999999999999964 678999999999999999776 4788999999999999
Q ss_pred EEEEEeCC--CCCceeEEee
Q 017112 88 NVLVQANQ--KPGRYFMAAR 105 (377)
Q Consensus 88 dvlv~~~~--~~g~y~l~~~ 105 (377)
+++|.+.+ .+|.|.+...
T Consensus 235 ~v~v~a~~~~nPG~w~~HCH 254 (313)
T 3tas_A 235 GFQVIAGEGVGAGAWMYHCH 254 (313)
T ss_dssp EEEEETTTTTCSEEEEEEEC
T ss_pred EEEEEeccCCCCEeEEEEeC
Confidence 99998864 4788887655
No 53
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=99.02 E-value=7.5e-10 Score=86.24 Aligned_cols=83 Identities=18% Similarity=0.257 Sum_probs=62.6
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCC-CccceeeeCCCCEEEEEEEc-
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDP-IERNTAAVPTGGWTAIRFRA- 331 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np-~~rDtv~v~~~~~~~i~~~~- 331 (377)
.+.++.|++|+|+ |.+ ...|.+|+|+..+.. . .|. +.+ ...|++.+.+|+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~-~--~g~------------~~~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA-K--SAD------------LAKSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT-C--CHH------------HHHHHCBCSCCCSTTCEEEEECCTT
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc-c--ccc------------cchhccccceeeCCCCEEEEEEecC
Confidence 5788999999886 653 357999999865411 0 000 000 01467789999999999888
Q ss_pred CCceeeEeeechHHHHhccceeEEEEe
Q 017112 332 DNPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 332 d~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
+.||.|.|||| .|.++||.+.|.|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 79999999999 89999999999985
No 54
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.98 E-value=1.1e-08 Score=102.75 Aligned_cols=259 Identities=14% Similarity=0.159 Sum_probs=141.8
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEE-EeCCCccCceEecEEEeCCCCEE
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVV-EVDAVYTKPFTTEAILIAPGQTT 87 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VI-a~DG~~v~P~~v~~l~l~~GqR~ 87 (377)
..+++||+.. .|+|+++.|++.++++.|........+...|..+.-- ..||.+- +.+..|.|||++
T Consensus 23 ~~~~~Ng~~P---------GP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~PG~s~ 89 (552)
T 1aoz_A 23 IVMGINGQFP---------GPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTAS----ISQCAINPGETF 89 (552)
T ss_dssp EEEEETTBSS---------CCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCccC---------CCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcc----cccCCcCCCCeE
Confidence 4688999852 5899999999999999999874455666666432110 1588763 234568999999
Q ss_pred EEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCCCCCC
Q 017112 88 NVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKFPADV 167 (377)
Q Consensus 88 dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~ 167 (377)
.--+++++ +|.||-........ .... ..+++... ......+ .+ .+ .+... .|.+.... .
T Consensus 90 tY~f~~~~-~GT~wYHsH~~~q~---~~Gl-~G~liV~~-~~~~~~~----~~-~d-~e~~l----~l~Dw~~~----~- 148 (552)
T 1aoz_A 90 FYNFTVDN-PGTFFYHGHLGMQR---SAGL-YGSLIVDP-PQGKKEP----FH-YD-GEINL----LLSDWWHQ----S- 148 (552)
T ss_dssp EEEEECCS-CEEEEEEECSTTTG---GGTC-EEEEEEEC-CTTCCCS----SC-CS-EEEEE----EEEEECSS----C-
T ss_pred EEEEECCC-CEEEEEEECchhHH---hccC-eeeEEEeC-CcccCCC----CC-CC-ccceE----EeecccCC----C-
Confidence 99999854 79999987742111 0112 22333333 2111100 00 01 00000 00000000 0
Q ss_pred CcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCCCccC
Q 017112 168 PQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLTASLG 247 (377)
Q Consensus 168 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 247 (377)
... +. .++..... ...+......|||+....-. +... + . .....+...|.
T Consensus 149 ---~~~-~~--~~~~~~~~--~~~~~~~~~liNG~~~~~c~--~~~~-~---~---------~~~~~c~~~~~------- 198 (552)
T 1aoz_A 149 ---IHK-QE--VGLSSKPI--RWIGEPQTILLNGRGQFDCS--IAAK-Y---D---------SNLEPCKLKGS------- 198 (552)
T ss_dssp ---HHH-HH--HHTTSSSC--CCCCSCSEEEETTBCCSSSB--TTGG-G---C---------TTSCBCCCCSC-------
T ss_pred ---HHH-HH--hhhhcccc--cCCCCCCeEEECCccccCcc--cCcc-c---c---------cccccccccCC-------
Confidence 000 00 00000000 00011112467776531000 0000 0 0 00000000000
Q ss_pred cCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEE
Q 017112 248 TSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAI 327 (377)
Q Consensus 248 ~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i 327 (377)
.......+.++.|++++|+|+|.+. ...+.|||+||.|+|++...+. ..|...|++.|.+|++..|
T Consensus 199 ~~~~~~~~~v~~G~~~RlRliNa~~--~~~~~~~i~gh~~~vi~~DG~~------------~~P~~~~~l~i~pgqR~dv 264 (552)
T 1aoz_A 199 ESCAPYIFHVSPKKTYRIRIASTTA--LAALNFAIGNHQLLVVEADGNY------------VQPFYTSDIDIYSGESYSV 264 (552)
T ss_dssp STTSCCCEEECTTCEEEEEEEECCS--SCEEEEEETTCCEEEEEETTEE------------EEEEEESCEEECTTCEEEE
T ss_pred CCCCceEEEEcCCCEEEEEEEcccc--cceEEEEEcCcEEEEEEECCcc------------cCceEEeEEEEcCCcEEEE
Confidence 0001125789999999999999873 3468999999999999985321 1366789999999999999
Q ss_pred EEEcCC--ceeeEeeechHH
Q 017112 328 RFRADN--PGVWFMHCHLEL 345 (377)
Q Consensus 328 ~~~~d~--pG~w~~HCHi~~ 345 (377)
.+++++ +|.|.++|+...
T Consensus 265 lv~~~~~~~g~y~i~~~~~~ 284 (552)
T 1aoz_A 265 LITTDQNPSENYWVSVGTRA 284 (552)
T ss_dssp EEECCSCTTCCEEEEEEEES
T ss_pred EEEcCCCCCCCEEEEEEccc
Confidence 999943 799999999764
No 55
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=98.95 E-value=1.7e-10 Score=119.61 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=72.2
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCC-eEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALND-ELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQT 86 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~-~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR 86 (377)
.+.++|||+.. ...+.++|++|+++||||+|++... .+.|+|+||.|+|++.||. .+|.|.|.||||
T Consensus 354 ~~~~~ING~~~-------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~ 421 (770)
T 2r7e_B 354 YRFHAINGYIM-------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVF 421 (770)
T ss_dssp SCEECTTSCTT-------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCC
T ss_pred CCccccCCccC-------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeE
Confidence 45688999852 1246789999999999999998754 7889999999999999974 889999999999
Q ss_pred EEEEEEeCCCCCceeEEee
Q 017112 87 TNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 87 ~dvlv~~~~~~g~y~l~~~ 105 (377)
++|++++++ +|.|.+...
T Consensus 422 ~~v~~~ad~-pG~w~~hcH 439 (770)
T 2r7e_B 422 ETVEMLPSK-AGIWRVECL 439 (770)
T ss_dssp CEEEECCSS-CBCCCBCCC
T ss_pred EEEEEEeCC-CCceEEEec
Confidence 999999986 688876554
No 56
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.94 E-value=2e-08 Score=99.35 Aligned_cols=235 Identities=13% Similarity=0.119 Sum_probs=140.1
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC----CeEEEEEcCceEEE-EEeCCCccCceEecEEEeCC
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN----DELFFAIAGHNFTV-VEVDAVYTKPFTTEAILIAP 83 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~----~~~~~~idgh~~~V-Ia~DG~~v~P~~v~~l~l~~ 83 (377)
..+++||+.. .|+|+++.|++.++++.|.... ....+...|-.+.- -..||.+- +.+-.|.|
T Consensus 23 ~~~~~NG~~P---------GP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~P 89 (499)
T 3pxl_A 23 QAVVVNGVTP---------GPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAF----INQCPISP 89 (499)
T ss_dssp EEEEETTBSS---------CCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccc---------CCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCC
Confidence 4678999852 5899999999999999999764 34556666653221 24788652 23347899
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKF 163 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~ 163 (377)
|+.+.--+++++.+|.||-.+...... .... ..+++.....+.. +.....++..... .+.+....
T Consensus 90 G~s~tY~f~~~~~~GT~wYHsH~~~q~---~~GL-~G~lIV~~~~~~~-----~~~~~~d~~~~~l----~l~Dw~~~-- 154 (499)
T 3pxl_A 90 GHSFLYDFQVPDQAGTFWYHSHLSTQY---CDGL-RGPFVVYDPNDPH-----ASRYDVDNDDTVI----TLADWYHT-- 154 (499)
T ss_dssp TCEEEEEEECSSCCEEEEEEECSTTGG---GGTC-EEEEEEECTTCTT-----GGGCSBCSGGGEE----EEEEECSS--
T ss_pred CCeEEEEEEcCCCCceeeeeccchhHH---hccc-eeEEEEcCCcccc-----cccCCCCCceEEE----EEEcccCC--
Confidence 999999999865589999987752110 0111 2234443322110 0000111110000 00000000
Q ss_pred CCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCC
Q 017112 164 PADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLT 243 (377)
Q Consensus 164 p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 243 (377)
.. .. .+.. ....-...|||+.....
T Consensus 155 -~~-~~-----------~~~~------p~~~d~~liNG~~~~~~------------------------------------ 179 (499)
T 3pxl_A 155 -AA-KL-----------GPRF------PGGADATLINGKGRAPS------------------------------------ 179 (499)
T ss_dssp -CT-TT-----------SCSS------CSSCSEEEETTBCCCTT------------------------------------
T ss_pred -cc-cc-----------ccCC------CCCCcEEEECCCCcCCC------------------------------------
Confidence 00 00 0000 00011245666532100
Q ss_pred CccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCC
Q 017112 244 ASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGG 323 (377)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~ 323 (377)
........+.++.|++++|+|+|.+. ...+.|||+||.|+|++.... +..|...|++.|.+|+
T Consensus 180 ---~~~~~~~~~~v~~G~~~RlRliNa~~--~~~~~~~i~gh~~~via~DG~------------~~~P~~~~~l~i~pGq 242 (499)
T 3pxl_A 180 ---DSVAELSVIKVTKGKRYRFRLVSLSC--NPNHTFSIDGHNLTIIEVDSV------------NSQPLEVDSIQIFAAQ 242 (499)
T ss_dssp ---CTTCCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTBCEEEEEETTE------------EEEEEEESBEEECTTC
T ss_pred ---CCCCCcceEEEcCCCEEEEEEEecCC--CeeEEEEECCCeEEEEEECCc------------ccCceEeeeEEECCCc
Confidence 00011246789999999999999873 457899999999999997521 1246678999999999
Q ss_pred EEEEEEEcCCc-eeeEeeech
Q 017112 324 WTAIRFRADNP-GVWFMHCHL 343 (377)
Q Consensus 324 ~~~i~~~~d~p-G~w~~HCHi 343 (377)
+..|.++++++ |.|.+.|..
T Consensus 243 R~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 243 RYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp EEEEEEECCSCSSEEEEEEEE
T ss_pred EEEEEEECCCCCceEEEEEec
Confidence 99999999875 898888864
No 57
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=98.92 E-value=4.7e-09 Score=102.80 Aligned_cols=224 Identities=14% Similarity=0.111 Sum_probs=134.0
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTT 87 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~ 87 (377)
-..+++||+. ..|+|++++|++.++++.|.... ...+...|....- +.||.+ ...|.|||++
T Consensus 38 ~~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~~-~tsiHwHG~~~~~-~~DG~~-------~~~i~PG~~~ 99 (451)
T 2uxt_A 38 ASVWGINGRY---------LGPTIRVWKGDDVKLIYSNRLTE-NVSMTVAGLQVPG-PLMGGP-------ARMMSPNADW 99 (451)
T ss_dssp SCCEEETTSS---------BCCEEEEETTCEEEEEEEECSSS-CBCEEEETCCCCG-GGSCSG-------GGCBCTTCEE
T ss_pred eEEEEECCcc---------cCceEEEeCCCEEEEEEEECCCC-CccEEECCccCCC-CCCCCC-------cCcCCCCCeE
Confidence 4567888874 25899999999999999999863 4456666543221 279986 3468999999
Q ss_pred EEEEEeCCCCCceeEEeeccCCCC-CCCCCcceEEEEEEcCCCCCCCCCCCCCCC-CCChhhHHhhhhhccCCCCCCCCC
Q 017112 88 NVLVQANQKPGRYFMAARPFNDAP-IPVDNKTATGILQYKGIPNSLLPTLAQLPA-SNDSEFALNYNKKLRSLNSPKFPA 165 (377)
Q Consensus 88 dvlv~~~~~~g~y~l~~~~~~~~~-~~~~~~~~~ail~y~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~l~~l~~~~~p~ 165 (377)
.--+++++.+|.||-......... .-.... ..+++.....+ ... .+|. +.+
T Consensus 100 ~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl-~G~liV~~~~~-~~~----~~p~~y~~--------------------- 152 (451)
T 2uxt_A 100 APVLPIRQNAATLWYHANTPNRTAQQVYNGL-AGMWLVEDEVS-KSL----PIPNHYGV--------------------- 152 (451)
T ss_dssp CCEEECCSCSEEEEEEECCTTTHHHHHHTTC-EEEEEEECHHH-HHS----SSCCCBTT---------------------
T ss_pred EEEEEcCCCCcceEEecCCCCchhhhHhhcc-eEEEEEecCcc-ccc----CCCccCCC---------------------
Confidence 999999877899998876422100 000111 22333332111 000 0110 000
Q ss_pred CCCcccceeEEEEecc---CCCC---C--CcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCC
Q 017112 166 DVPQKVDRKLFYTIGF---GKDS---C--PTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNY 237 (377)
Q Consensus 166 ~~p~~~~~~~~~~~~~---~~~~---~--~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 237 (377)
+.+.+.++. .... + ..........+.|||+.+
T Consensus 153 -------~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~--------------------------------- 192 (451)
T 2uxt_A 153 -------DDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQS--------------------------------- 192 (451)
T ss_dssp -------TEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEES---------------------------------
T ss_pred -------ceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCccc---------------------------------
Confidence 011111100 0000 0 000000001133444322
Q ss_pred CCCCCCCccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeee-cCCceEEEEecCCCCCCCCCCCCCCCCCCCccce
Q 017112 238 TGAPLTASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHL-HGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNT 316 (377)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~Hl-Hg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDt 316 (377)
+.+.++.| +++|+|.|.+. ...+.||| |||.|+|++...+. +..|...|+
T Consensus 193 ---------------p~~~v~~g-~~RlRliNa~~--~~~~~~~i~dg~~~~vi~~DG~~-----------~~~P~~~~~ 243 (451)
T 2uxt_A 193 ---------------PYVEVSRG-WVRLRLLNASN--SRRYQLQMNDGRPLHVISGDQGF-----------LPAPVSVKQ 243 (451)
T ss_dssp ---------------CEEEECSS-EEEEEEEECCS--SCCEEEEETTSCCEEEEECSSSE-----------EEEEEEESS
T ss_pred ---------------ceEEecCC-EEEEEEEccCC--ceeEEEEECCCCeEEEEEeCCCc-----------cCCceEece
Confidence 24778899 99999999873 45799999 99999999974321 124567899
Q ss_pred eeeCCCCEEEEEEEcCCceeeEeeechHH
Q 017112 317 AAVPTGGWTAIRFRADNPGVWFMHCHLEL 345 (377)
Q Consensus 317 v~v~~~~~~~i~~~~d~pG~w~~HCHi~~ 345 (377)
+.|.+|++..|.+.++.+|.|.++++...
T Consensus 244 l~l~pgeR~dvlv~~~~~~~~~l~~~~~~ 272 (451)
T 2uxt_A 244 LSLAPGERREILVDMSNGDEVSITCGEAA 272 (451)
T ss_dssp EEECTTCEEEEEEECTTCCCEEEEC----
T ss_pred EEECceeEEEEEEEeCCCCEEEEEecCcc
Confidence 99999999999999998899999988644
No 58
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.90 E-value=3.5e-09 Score=86.78 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=70.7
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCC--ceEEE-Eec--CC---CCCCCCCCCCCCCCCCCccceeeeCCCCEE
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGY--NFFVV-GTG--IG---NFDPVKYPANYNLVDPIERNTAAVPTGGWT 325 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~--~f~vl-~~g--~g---~~~~~~~~~~~~~~np~~rDtv~v~~~~~~ 325 (377)
.+.++.|++|+|++.|.+. +...|.||++.. .+.-. ..+ .+ .|-+.. -....+++|..|.+|+..
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 5789999999999999321 246899999853 22100 000 00 010000 011346789999999999
Q ss_pred EEEEEcCCceeeEeeechHHHHhccceeEEEEe
Q 017112 326 AIRFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 326 ~i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.+.|.++.||.|.|||++..|...||.+.|.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999986
No 59
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.89 E-value=2.2e-08 Score=99.87 Aligned_cols=241 Identities=11% Similarity=0.125 Sum_probs=139.9
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC----CeEEEEEcCceEE-EEEeCCCccCceEecEEEeCC
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN----DELFFAIAGHNFT-VVEVDAVYTKPFTTEAILIAP 83 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~----~~~~~~idgh~~~-VIa~DG~~v~P~~v~~l~l~~ 83 (377)
..+++||+.. .|+|+++.|++.++++.|.... ....+...|-... --..||.+- +.+-.|.|
T Consensus 44 ~~~~~NG~~P---------GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~~I~P 110 (521)
T 1v10_A 44 SAVTAEGTTI---------APLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAF----VNQCPIIP 110 (521)
T ss_dssp EEEEESSSSS---------CCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccC---------CCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcc----eeeCCcCC
Confidence 5678999852 5899999999999999999862 4455666554321 123688752 23345889
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKF 163 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~ 163 (377)
||.+.--++..+.+|.||-........ .... ..+++.....+.. +..-..++.+... .+.+.. +
T Consensus 111 G~s~~Y~f~~~~~~GT~wYH~H~~~q~---~~Gl-~G~liV~~~~~~~-----~~~~~~d~~e~~l----~l~D~~---~ 174 (521)
T 1v10_A 111 NESFVYDFVVPGQAGTYWYHSHLSTQY---CDGL-RGAFVVYDPNDPH-----LSLYDVDDASTVI----TIADWY---H 174 (521)
T ss_dssp TEEEEEEEECTTCCEEEEEEECSTTGG---GGTC-EEEEEEECTTCTT-----GGGCSBCSGGGEE----EEEEEC---S
T ss_pred CCeEEEEEecCCCCccEEEEeccCCch---hcCc-eEEEEEcCCcccc-----cccCCCCCceeEE----EEcccc---c
Confidence 999999888655589999987652110 0111 2233333321110 0000001001000 010000 0
Q ss_pred CCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCC
Q 017112 164 PADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLT 243 (377)
Q Consensus 164 p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 243 (377)
. .+..+....+... ...-...|||+.+....
T Consensus 175 ~------~~~~~~~~~~~~~--------~~~d~~liNG~~~~~~~----------------------------------- 205 (521)
T 1v10_A 175 S------LSTVLFPNPNKAP--------PAPDTTLINGLGRNSAN----------------------------------- 205 (521)
T ss_dssp S------CCC-------CCC--------SCCSEEEETTBCCCSSC-----------------------------------
T ss_pred C------CHHHHhhccCCCC--------CCCCEEEECCcccCCCC-----------------------------------
Confidence 0 0000000000000 00112456665431000
Q ss_pred CccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCC
Q 017112 244 ASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGG 323 (377)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~ 323 (377)
......+.+.++.|++++|+|.|.+. ...|.||++||.|.|++...+. ..|...|++.|.+|+
T Consensus 206 ---~~~~~~~~~~v~~G~~~RlRliNa~~--~~~~~~~i~gh~~~vi~~DG~~------------~~p~~~~~l~l~pgq 268 (521)
T 1v10_A 206 ---PSAGQLAVVSVQSGKRYRFRIVSTSC--FPNYAFSIDGHRMTVIEVDGVS------------HQPLTVDSLTIFAGQ 268 (521)
T ss_dssp ---GGGSCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTCCEEEEEETTEE------------EEEEEESBEEECTTC
T ss_pred ---CCCCCceEEEECCCCEEEEEEEecCC--cccEEEEECCCeEEEEecCCcc------------ccceeeeeEEEcccc
Confidence 00011246889999999999999874 3579999999999999985321 135678999999999
Q ss_pred EEEEEEEcCC-ceeeEeeechH
Q 017112 324 WTAIRFRADN-PGVWFMHCHLE 344 (377)
Q Consensus 324 ~~~i~~~~d~-pG~w~~HCHi~ 344 (377)
+..|.++++. +|.|.++|+..
T Consensus 269 R~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 269 RYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp EEEEEEECCSCSSEEEEEEEES
T ss_pred eEEEEEEcCCCCCceeeeeccc
Confidence 9999999987 69999999854
No 60
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.89 E-value=3.3e-08 Score=97.73 Aligned_cols=237 Identities=11% Similarity=0.090 Sum_probs=140.1
Q ss_pred CeEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCC----CeEEEEEcCceEEE-EEeCCCccCceEecEEEeCC
Q 017112 9 DAHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALN----DELFFAIAGHNFTV-VEVDAVYTKPFTTEAILIAP 83 (377)
Q Consensus 9 d~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~----~~~~~~idgh~~~V-Ia~DG~~v~P~~v~~l~l~~ 83 (377)
..+++||+.. .|+|+++.|++.++++.|.... ....+...|-.+.- -..||.+- +.+-.|.|
T Consensus 24 ~~~~~NG~~P---------GP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~P 90 (495)
T 3t6v_A 24 PAVNAGGTFP---------GPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIV 90 (495)
T ss_dssp EEEEETTSSS---------CCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCT
T ss_pred EEEEECCccc---------CCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCC
Confidence 5788999852 5899999999999999999764 24456665543211 24788653 23456899
Q ss_pred CCEEEEEEEeCCCCCceeEEeeccCCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCChhhHHhhhhhccCCCCCCC
Q 017112 84 GQTTNVLVQANQKPGRYFMAARPFNDAPIPVDNKTATGILQYKGIPNSLLPTLAQLPASNDSEFALNYNKKLRSLNSPKF 163 (377)
Q Consensus 84 GqR~dvlv~~~~~~g~y~l~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~l~~~~~ 163 (377)
|+.+.--+++++.+|.||-.+...... .... ..+++.....+.. ......++..... .+.+....
T Consensus 91 G~sftY~f~~~~~~GT~wYHsH~~~q~---~~GL-~G~lIV~~~~~~~-----~~~~~~d~~e~~l----~l~Dw~~~-- 155 (495)
T 3t6v_A 91 GNSFSYNFNVPGMAGTYWYHSHLTTQY---CDGL-RGPFVVYDPNDPD-----ANLYDVDDDTTII----TLADWYHV-- 155 (495)
T ss_dssp TCEEEEEEECTTCCEEEEEEECSTTGG---GGTC-EEEEEEECTTCTT-----GGGCSBCSGGGEE----EEEEECSS--
T ss_pred CCeEEEEEEeCCCCceeeeeccchhHH---hcCc-eEEEEEcCccccc-----cccCCCCCceeEE----EEecccCC--
Confidence 999999999965589999987752110 0111 2234444322110 0001111110000 00000000
Q ss_pred CCCCCcccceeEEEEeccCCCCCCcccCCceeeeeecceeeecCchhhhhhhhcccCcccccCCCCCCCCCCCCCCCCCC
Q 017112 164 PADVPQKVDRKLFYTIGFGKDSCPTCVNGTRLLATLNNISFVMPQTALLQAHYFNLKGVFKADFPDKPPKPFNYTGAPLT 243 (377)
Q Consensus 164 p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~p~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 243 (377)
. ...+ ..+. ....-...|||+..... .
T Consensus 156 --~-----~~~~----~~~~-------p~~~d~~liNG~g~~~~-----------------~------------------ 182 (495)
T 3t6v_A 156 --L-----AKEM----GAGG-------AITADSTLIDGLGRTHV-----------------N------------------ 182 (495)
T ss_dssp --C-----GGGS----CSSS-------CCCCSEEEETTBCCBSS-----------------S------------------
T ss_pred --c-----hhhh----ccCC-------CCCCcEEEECCcCcCCC-----------------C------------------
Confidence 0 0000 0000 00011245666532100 0
Q ss_pred CccCcCCceeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCC
Q 017112 244 ASLGTSRATRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGG 323 (377)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~ 323 (377)
........+.++.|++++|+|+|.+. ...+.|||+||.|+|++.... +..|...|++.|.+|+
T Consensus 183 ---~~~~~~~~~~v~~G~~~RlRliN~~~--~~~~~~~i~gh~~~via~DG~------------~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 183 ---VAAVPLSVITVEVGKRYRMRLVSISC--DPNYDFSIDGHDMTIIETDGV------------DSQELTVDEIQIFAAQ 245 (495)
T ss_dssp ---CCCCCCCEEEECTTCEEEEEEEECCS--SCCEEEEETTCCEEEEEETTE------------EEEEEEESBEEECTTC
T ss_pred ---cccCCceEEEEcCCCEEEEEEEecCC--CeeEEEEECCCeEEEEEeCCc------------ccCCEEeeeEEEcCce
Confidence 00011246789999999999999873 456899999999999998521 1246678999999999
Q ss_pred EEEEEEEcCCc-eeeEeeech
Q 017112 324 WTAIRFRADNP-GVWFMHCHL 343 (377)
Q Consensus 324 ~~~i~~~~d~p-G~w~~HCHi 343 (377)
+..|.++++++ |.|.++|..
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEE
T ss_pred EEEEEEECCCCCceEEEEEec
Confidence 99999999875 899899864
No 61
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.88 E-value=3.5e-09 Score=98.07 Aligned_cols=87 Identities=17% Similarity=0.208 Sum_probs=71.7
Q ss_pred EEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC---ceEecEEEeCCCCEE
Q 017112 11 HTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK---PFTTEAILIAPGQTT 87 (377)
Q Consensus 11 ~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~---P~~v~~l~l~~GqR~ 87 (377)
+.+||+. ....+.+.++.|+++||||||++.. ...|.|.||.|.|++.|+.... +..+|.+.|.||||+
T Consensus 179 ~~~Ng~~-------~~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHGh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~ 250 (299)
T 3t9w_A 179 MMINNRA-------HHDAPTFEANLGERVEWIAIGHGSN-FHTFHLHGHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSF 250 (299)
T ss_dssp TEETTCC-------TTCCCEEEEETTCEEEEEEEEESSC-CCEEEETTCCEESSSSSSCCSTTCCCCEESEEECCTTCEE
T ss_pred eeecCcc-------ccccccceecCCCEEEEEEEecccc-ceeeeEecceEEEEecccccCCcCCCCceeeEEeCCceeE
Confidence 4678875 2346789999999999999999975 4679999999999999987763 356899999999999
Q ss_pred EEEEEeCC--CCCceeEEee
Q 017112 88 NVLVQANQ--KPGRYFMAAR 105 (377)
Q Consensus 88 dvlv~~~~--~~g~y~l~~~ 105 (377)
+++|.+.+ .+|.|.+...
T Consensus 251 ~~~via~~~dnPG~w~~HCH 270 (299)
T 3t9w_A 251 GFQVIAGEGVGPGMWMYHCH 270 (299)
T ss_dssp EEEEETTTTTCSEEEEEEEC
T ss_pred EEEEEEeeCCCCeeEEEEcC
Confidence 99997654 4788887654
No 62
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=98.85 E-value=9.6e-09 Score=94.06 Aligned_cols=87 Identities=15% Similarity=0.217 Sum_probs=73.0
Q ss_pred EEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc----CceEecEEEeCCCCE
Q 017112 11 HTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT----KPFTTEAILIAPGQT 86 (377)
Q Consensus 11 ~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v----~P~~v~~l~l~~GqR 86 (377)
++|||+.. ...+.|+++.|+++||||+|.+.. ...|.|.||.|.|++ ||... .+...|.+.|.||||
T Consensus 157 ~~iNG~~~-------~~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~ 227 (276)
T 3kw8_A 157 MTINNRKP-------HTGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADS 227 (276)
T ss_dssp TEETTCCT-------TCCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCE
T ss_pred cccceecc-------cCCCCEEEecCCEEEEEEecCCCc-ceeEEEccceeEEec-cCccCCCcccccCCccEEeCCCce
Confidence 58999862 136789999999999999999974 778999999999975 77543 246789999999999
Q ss_pred EEEEEEeCC--CCCceeEEeec
Q 017112 87 TNVLVQANQ--KPGRYFMAARP 106 (377)
Q Consensus 87 ~dvlv~~~~--~~g~y~l~~~~ 106 (377)
+++++++++ .+|.|++....
T Consensus 228 ~~~~~~~~~~~npG~w~~HCH~ 249 (276)
T 3kw8_A 228 FGFQIIAGEGVGAGAWMYHCHV 249 (276)
T ss_dssp EEEEEETTTTTCSEEEEEEECS
T ss_pred EEEEEEeccCCCCCeEEEECCC
Confidence 999999985 57999998763
No 63
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=98.81 E-value=1.6e-08 Score=95.48 Aligned_cols=87 Identities=15% Similarity=0.201 Sum_probs=71.0
Q ss_pred EEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC----ceEecEEEeCCCCE
Q 017112 11 HTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK----PFTTEAILIAPGQT 86 (377)
Q Consensus 11 ~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~----P~~v~~l~l~~GqR 86 (377)
++|||+.. ...+.+.+++|+++||||+|.+. ....|.|.||.|+|+ .||.+.. +...|++.|.||||
T Consensus 198 ~~iNG~~~-------~~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~ 268 (343)
T 3cg8_A 198 MTINNRKP-------HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPDDPSRVIDNKITGPADS 268 (343)
T ss_dssp TEETTCCT-------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTTCCCCEESEEEECTTCE
T ss_pred ceecccCC-------CCCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCCCcccceeeEEeCCCCE
Confidence 57999852 12578999999999999999997 577899999999998 4776553 45779999999999
Q ss_pred EEEEEEeCC--CCCceeEEeec
Q 017112 87 TNVLVQANQ--KPGRYFMAARP 106 (377)
Q Consensus 87 ~dvlv~~~~--~~g~y~l~~~~ 106 (377)
+++++++++ .+|.|++....
T Consensus 269 ~~v~~~~~~~~~pG~w~~HCHi 290 (343)
T 3cg8_A 269 FGFQIIAGEGVGAGAWMYHCHV 290 (343)
T ss_dssp EEEEEETTTTTCSEEEEEEECS
T ss_pred EEEEEEECCCCCCeeEEEeCCC
Confidence 999999842 47888887653
No 64
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.81 E-value=1.3e-08 Score=77.85 Aligned_cols=78 Identities=17% Similarity=0.254 Sum_probs=59.1
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc-cceeeeCCCCEEEEEEEcC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE-RNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~-rDtv~v~~~~~~~i~~~~d 332 (377)
.+.++.|++|+|+ |.+ ...|.+|+++..+- +.. .+.| .|+..+.+|+...+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~~----------------~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--ADT----------------AAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HHH----------------HHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--ccc----------------cccccccccccCCCCEEEEEc--C
Confidence 5789999999987 543 35799999874321 000 0012 4678899999888866 8
Q ss_pred CceeeEeeechHHHHhccceeEEEEe
Q 017112 333 NPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.||.|.|||| .|.+.||.+.|.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999874
No 65
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.78 E-value=1.5e-08 Score=77.56 Aligned_cols=80 Identities=16% Similarity=0.233 Sum_probs=59.6
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+| .|.+ ...|.+|+|+..+. ..++. ...++|+..+.+|+...+.| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~p------~~~~~----------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAIP------SGVNA----------DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGSC------TTCCH----------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCC------Ccccc----------ccccccceecCCCCEEEEEe--CC
Confidence 578999999998 4653 45899999875320 00000 01246788999999888866 58
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|||| .|.+.||.+.|.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999873
No 66
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.74 E-value=2.6e-08 Score=75.02 Aligned_cols=72 Identities=21% Similarity=0.387 Sum_probs=56.9
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+ |.+ ...|.+|+|+.. +...++..+.+|+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 5788999999986 543 357999988721 0124677889998877766 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|||| .|...||.+.|.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999874
No 67
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.71 E-value=6.4e-09 Score=79.50 Aligned_cols=77 Identities=22% Similarity=0.356 Sum_probs=58.3
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc-cceeeeCCCCEEEEEEEcC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE-RNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~-rDtv~v~~~~~~~i~~~~d 332 (377)
.+.++.|++|+|+ |.+ ...|.+++++..+. .+. ..+ .++..+.+|+...+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~~-----~~~--------------~~~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPAG-----ESA--------------PALSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCTT-----SCH--------------HHHCBCCCCCSCSCCEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCCc-----ccc--------------ccccccceecCCCCEEEEEe--C
Confidence 5789999999887 543 35799998875541 000 001 4677888998888766 8
Q ss_pred CceeeEeeechHHHHhccceeEEEEe
Q 017112 333 NPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.||.|.|||+ .|.++||.+.|.|+
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999999 89999999999874
No 68
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.70 E-value=5.8e-08 Score=74.62 Aligned_cols=72 Identities=19% Similarity=0.385 Sum_probs=58.6
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.+|+...+.|.++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 588999999999999974 3457666654332 235678889999999999
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|+|. .|...||.+.+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999997 59999999999884
No 69
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.68 E-value=6.4e-08 Score=75.97 Aligned_cols=75 Identities=17% Similarity=0.343 Sum_probs=58.5
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.+.++.|+.|+|.+.|.+ ...|.|++.... -...+.||+...+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~~----------------------------~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKS---PISEGFSIDAFG----------------------------VQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCEEEEEGGGT----------------------------EEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECC---CCeEEEEEcCCC----------------------------ceeEeCCCCEEEEEEECC
Confidence 3588999999999999974 234555443211 145789999999999999
Q ss_pred CceeeEeeechHHHHhccceeEEEEeC
Q 017112 333 NPGVWFMHCHLELHTGWGLKTAFAVED 359 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~~~Gm~~~~~v~~ 359 (377)
.||.|.||||+..|... |.+.+.|++
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999998777544 999998863
No 70
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.65 E-value=4.5e-08 Score=75.01 Aligned_cols=82 Identities=16% Similarity=0.200 Sum_probs=58.8
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+| .|.+ ...|.+|+++..|. .+ ++. ... ...+|++.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~g---~~~----~~~----~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---AG---VDV----TKI----SMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---TT---CCH----HHH----SCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---cc---ccc----ccc----cccccceeeCCCCEEEEEe--CC
Confidence 578899999988 4653 45799999985441 00 000 000 0125667889999888866 59
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|||+ .|.++||.+.|.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999873
No 71
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.64 E-value=1.6e-07 Score=94.44 Aligned_cols=92 Identities=18% Similarity=0.309 Sum_probs=70.2
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCC-CCEEEEEEEc
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPT-GGWTAIRFRA 331 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~-~~~~~i~~~~ 331 (377)
+.++++.|+++++.+.|.. ....+.+|+||.... +....|+.. -----.|+| |+..+.+|++
T Consensus 67 P~i~~~~GD~v~v~v~N~l--~~~~tsiHwHG~~~~----~~~~~DG~~-----------~~tq~~I~P~G~~~~Y~f~~ 129 (559)
T 2q9o_A 67 PNIVANWGDTVEVTVINNL--VTNGTSIHWHGIXQK----DTNLHDGAN-----------GVTECPIPPKGGQRTYRWRA 129 (559)
T ss_dssp CCEEEETTCEEEEEEEEEC--SSCCBCEEEETCCCT----TCGGGSCCB-----------TTTBCCBCTTTEEEEEEEEC
T ss_pred CcEEEeCCCEEEEEEEeCC--CCCCceEEcCCCccC----CCCCcCCCC-----------ccccCccCCCCCeEEEEEEC
Confidence 4689999999999999974 345799999997531 111111100 000124889 9999999999
Q ss_pred CCceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 332 DNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 332 d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
+.+|.|.||||...|...||.|.|+|++..
T Consensus 130 ~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 159 (559)
T 2q9o_A 130 RQYGTSWYHSHFSAQYGNGVVGTIQINGPA 159 (559)
T ss_dssp CSCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred CCCEEEEEEEcccchhcCCceEEEEecCCC
Confidence 999999999999999999999999998654
No 72
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.56 E-value=1.2e-07 Score=72.96 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=57.5
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc-cceeeeCCCCEEEEEEEcC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE-RNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~-rDtv~v~~~~~~~i~~~~d 332 (377)
.+.++.|++|+|+ |.+ ...|.++++.....- +.+.... ..+.+ .+++.+.+|+...+.| +
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~~-----~~~~~~~-------~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIPAGAP-----GTVASEL-------KAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCCTTCC-----HHHHHHH-------HHTSCCTTCCBBTTBCEEEECC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCccccc-----ccccchh-------hcccccccceecCCCCEEEEEe--C
Confidence 5789999999986 653 357999987311100 0000000 00112 3667889999888866 8
Q ss_pred CceeeEeeechHHHHhccceeEEEEe
Q 017112 333 NPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.||.|.|||+ .|.++||.+.|.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999874
No 73
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.53 E-value=6.2e-07 Score=89.98 Aligned_cols=86 Identities=16% Similarity=0.306 Sum_probs=70.2
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcccee------eeCCCCEEE
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTA------AVPTGGWTA 326 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv------~v~~~~~~~ 326 (377)
+.++++.|+++++.+.|.. ....+.+|+||.... +. .|.|-+ .|+||+..+
T Consensus 98 P~I~~~~GD~v~V~v~N~l--~~~~tsIHwHGl~~~----~t-----------------~~~DGvp~vTq~pI~PG~sft 154 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNL--EHNGTSIHWHGIRQL----GS-----------------LEYDGVPGVTQCPIAPGDTLT 154 (580)
T ss_dssp CCEEEETTCEEEEEEEECC--SSCCBCEEETTCCCT----TC-----------------GGGSCCBTTTBCCBCTTCEEE
T ss_pred ceEEEeCCCEEEEEEEECC--CCCcceEEecccccC----CC-----------------ccccCCCccccCCCCCCCeEE
Confidence 4689999999999999974 235799999997531 11 122222 589999999
Q ss_pred EEEEcCCceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 327 IRFRADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 327 i~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
.+|+++.+|.|.||||...+...||.|.|+|.++.
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 99999999999999999999999999999998654
No 74
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.48 E-value=1.5e-06 Score=85.37 Aligned_cols=87 Identities=20% Similarity=0.319 Sum_probs=69.8
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.++++.|+++++.+.|.. +..+.+|+||-.. . +..|+. | --.|+||+..+.+|.++
T Consensus 82 PtIr~~~Gd~v~v~v~N~l---~~~tsiHwHGl~~----~--~~~DG~----------p----q~~I~PG~s~~Y~f~~~ 138 (481)
T 3zx1_A 82 PKIEVFEGDKLEILVKNKL---KEATTIHWHGVPV----P--PDQDGS----------P----HDPILAGEERIYRFEIP 138 (481)
T ss_dssp CBEEEETTCEEEEEEEECS---SSCBCCEEETCCC----C--GGGSCC----------T----TSCBCTTCEEEEEEECC
T ss_pred ceEEEECCcEEEEEEEeCC---CCCeeEEecCccc----C--CccCCC----------c----cCcCCCCCeEEEEEeCC
Confidence 4689999999999999974 5689999999863 1 111211 1 12688999999999998
Q ss_pred C--ceeeEeeech----HHHHhccceeEEEEeCCCC
Q 017112 333 N--PGVWFMHCHL----ELHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 333 ~--pG~w~~HCHi----~~H~~~Gm~~~~~v~~~~~ 362 (377)
+ +|.|.||||. ..|...||.+.++|++..+
T Consensus 139 ~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~ 174 (481)
T 3zx1_A 139 QDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKD 174 (481)
T ss_dssp TTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSC
T ss_pred CCCCceEEEeecCCCcchhhhhccceEEEEEcCccc
Confidence 7 7999999996 7899999999999987654
No 75
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.47 E-value=4.5e-07 Score=89.96 Aligned_cols=88 Identities=20% Similarity=0.263 Sum_probs=69.8
Q ss_pred eeeeeccCceEEEEEeecCCCC--CCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCcccee------eeCCCCE
Q 017112 253 RLSKIAFNSTIELVLQDTNLLT--VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTA------AVPTGGW 324 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~--~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv------~v~~~~~ 324 (377)
+.++++.|+++++.+.|...-. ...+.+|+||... .+. .+-|=+ .|+||+.
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~----~~~-----------------~~~DGv~~vtq~~I~PG~~ 92 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQ----RGT-----------------NWADGADGVNQCPISPGHA 92 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCC----TTC-----------------GGGSCCBTTTBCCBCTTCE
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceec----cCC-----------------CccCCCcccccCCcCCCCe
Confidence 5789999999999999974100 1689999999753 111 122222 4889999
Q ss_pred EEEEEE-cCCceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 325 TAIRFR-ADNPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 325 ~~i~~~-~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
.+.+|+ ++.+|.|.||||...|...||.|.|+|++..
T Consensus 93 ~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 93 FLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp EEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 999999 6889999999999999999999999998754
No 76
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.44 E-value=9e-07 Score=88.38 Aligned_cols=92 Identities=20% Similarity=0.326 Sum_probs=70.1
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.++++.|+++++.+.|.. ....+.+|+||.... +....|+.. .. ---.|+||+..+.+|+++
T Consensus 34 P~i~~~~Gd~v~v~v~N~l--~~~~tsiHwHG~~~~----~~~~~DG~~---~v--------tq~pI~PG~~~~Y~f~~~ 96 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGM--NNTNTSMHFHGLFQN----GTASMDGVP---FL--------TQCPIAPGSTMLYNFTVD 96 (534)
T ss_dssp CCEEEETTCEEEEEEECCC--SSCCBCCEEETCCCT----TCGGGSCCB---TT--------TBCCBCTTCEEEEEEECS
T ss_pred ccEEEECCCEEEEEEEeCC--CCCCeeEEcCCcccC----CCCcccCCC---cc--------ccCCcCCCCeEEEEEEeC
Confidence 4688999999999999974 236899999996541 111111100 00 012588999999999998
Q ss_pred -CceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 333 -NPGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 333 -~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
.+|.|.||||...|...||.|.++|++..
T Consensus 97 ~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 97 YNVGTYWYHSHTDGQYEDGMKGLFIIKDDS 126 (534)
T ss_dssp SCCEEEEEECCSSSGGGGTCEEEEEEECTT
T ss_pred ccceeEEEEEcCcccccCcceeeEEeCCCC
Confidence 89999999999999999999999998764
No 77
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.41 E-value=5.2e-07 Score=74.88 Aligned_cols=89 Identities=19% Similarity=0.385 Sum_probs=60.6
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc---cceeeeCCCC--EEEE
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE---RNTAAVPTGG--WTAI 327 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~---rDtv~v~~~~--~~~i 327 (377)
+.+.++.|++|++++.|.+ ....|-+-++.. +. .+.. .+ ...+.. .-+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~~-~~~~--~~----~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------GP-PYAV--MP----VIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------CS-CCCS--SC----CCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------Cc-chhc--cc----cccccccccccccccCCCCceEEEE
Confidence 4689999999999999963 134566655521 10 0100 00 000000 0112678999 9999
Q ss_pred EEEcCCceeeEeeechHHHHhccceeEEEEe
Q 017112 328 RFRADNPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 328 ~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.|.+ .||.+.||||+.-|...||.+.+.|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999873
No 78
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.40 E-value=4.4e-07 Score=69.38 Aligned_cols=82 Identities=16% Similarity=0.206 Sum_probs=57.5
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+| .|.+ ...|.++++...+. .+ .+. .. ....++.+.+.+|+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~~---~~~------~~--~~~~~~~~~~~~G~~~~~tf--~~ 76 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---SG---VDA------SK--ISMSEEDLLNAKGETFEVAL--SN 76 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSSC---TT---CCH------HH--HCCCTTCCBCSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCc---cc---ccc------cc--cccccCccccCCCCEEEEEE--CC
Confidence 578999999988 5653 45799998875331 00 000 00 00113556788999877766 69
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|||+ .|..+||.+.+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 77 KGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999 79999999999873
No 79
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.34 E-value=1.5e-06 Score=84.94 Aligned_cols=87 Identities=18% Similarity=0.232 Sum_probs=70.7
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.++++.|+++++.+.|.. +..+.+|+||-..- ...+|. |. -.|+||+..+.+|+++
T Consensus 38 P~i~~~~Gd~v~v~~~N~l---~~~tsiHwHG~~~~--~~~DG~--------------~~----~~i~PG~~~~Y~f~~~ 94 (448)
T 3aw5_A 38 PTIILRRGQRVDMTLKNKL---TEPTIVHWHGFDVN--WHNDAH--------------PS----FAITPGESYNYSFDVV 94 (448)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCBCEEEETCCCC--HHHHTC--------------GG----GCBCTTCEEEEEEECC
T ss_pred ceEEEeCCCEEEEEEEECC---CCceeEEeCCccCC--CccCCC--------------CC----ccCCCCCEEEEEEEcC
Confidence 5789999999999999974 46899999997641 111110 11 4688999999999998
Q ss_pred -CceeeEeeec----hHHHHhccceeEEEEeCCCC
Q 017112 333 -NPGVWFMHCH----LELHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 333 -~pG~w~~HCH----i~~H~~~Gm~~~~~v~~~~~ 362 (377)
.+|.|.|||| ...|...||.|.++|++..+
T Consensus 95 ~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~ 129 (448)
T 3aw5_A 95 NRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGS 129 (448)
T ss_dssp SCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTT
T ss_pred CCCCceEeccCCCCchHHHHhccceEEEEEeCCcc
Confidence 7999999999 89999999999999987654
No 80
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.33 E-value=2.2e-06 Score=84.32 Aligned_cols=86 Identities=22% Similarity=0.411 Sum_probs=69.1
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.++++.|+.+++.+.|.. +..+.+|+||-... ....|. | --.|.||+..+.+|.++
T Consensus 48 P~i~~~~Gd~v~v~~~N~l---~~~tsiHwHG~~~~--~~~DG~--------------p----~~~i~PG~~~~Y~f~~~ 104 (488)
T 3od3_A 48 PAVKLQRGKAVTVDIYNQL---TEETTLHWHGLEVP--GEVDGG--------------P----QGIIPPGGKRSVTLNVD 104 (488)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCBCCEEETCCCC--HHHHCC--------------T----TCCBCTTCEEEEEEECC
T ss_pred CeEEEeCCeEEEEEEEeCC---cCceeEeecccccC--cccCCC--------------C----cCcCcCCCeEEEEEecC
Confidence 5789999999999999974 56899999998642 111110 1 12688999999999999
Q ss_pred Cc-eeeEeeech----HHHHhccceeEEEEeCCC
Q 017112 333 NP-GVWFMHCHL----ELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 333 ~p-G~w~~HCHi----~~H~~~Gm~~~~~v~~~~ 361 (377)
++ |.|.||||. ..|...||.+.++|++..
T Consensus 105 ~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 138 (488)
T 3od3_A 105 QPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDE 138 (488)
T ss_dssp SCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHH
T ss_pred CCceeEEEEecCCCcchhhhhccceeEEEEcCcc
Confidence 85 999999997 689999999999998654
No 81
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.33 E-value=1.5e-06 Score=86.81 Aligned_cols=78 Identities=18% Similarity=0.359 Sum_probs=63.5
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.+.++.|+.|+|++.|.....+..|.|+++++.+. ..+.||+...+.|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 467899999999999996432345799998876432 3678899999999999
Q ss_pred CceeeEeeec---hHHHHhccceeEEEEeCC
Q 017112 333 NPGVWFMHCH---LELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 333 ~pG~w~~HCH---i~~H~~~Gm~~~~~v~~~ 360 (377)
.||.|.|||| ...|. ||.+.+.|++.
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 9999999999 45775 99999999753
No 82
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.25 E-value=3e-06 Score=65.50 Aligned_cols=72 Identities=15% Similarity=0.276 Sum_probs=51.1
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+ |.+ ...|.+|+|+.. .|. ..+ +.-.+.+|+...+.| +.
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~~ 84 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--TE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--CC
Confidence 5889999999985 654 457999988522 010 001 122467888776665 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|||++ |. ||.+.|.|+
T Consensus 85 ~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 85 AGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999997 65 999999873
No 83
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.23 E-value=6.4e-06 Score=82.16 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=68.3
Q ss_pred eeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEc
Q 017112 252 TRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA 331 (377)
Q Consensus 252 ~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~ 331 (377)
.+.++++.|+++++.+.|.. +..+.+|+||... . +..|+. + + -.|+||++.+.+|.+
T Consensus 68 GPtI~~~~Gd~v~v~v~N~l---~~~tsiHwHGl~~----~--~~~DG~--~-----------~-~~i~PG~~~~Y~f~~ 124 (534)
T 3abg_A 68 GPTFQVPRGVETVVRFINNA---EAPNSVHLHGSFS----R--AAFDGW--A-----------E-DITEPGSFKDYYYPN 124 (534)
T ss_dssp EEEEEEETTCCEEEEEEECS---SSCBCEEEETCCC----C--TTTTTC--S-----------S-SCBSSCSCCCEEECC
T ss_pred CceEEEeCCcEEEEEEEECC---CCCceEEECCCcC----C--CCCCCC--C-----------C-CCCCCCCeEEEEEec
Confidence 36789999999999999975 4689999999752 1 111211 0 1 137899999999999
Q ss_pred CC-ceeeEeeechH----HHHhccceeEEEEeCCCC
Q 017112 332 DN-PGVWFMHCHLE----LHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 332 d~-pG~w~~HCHi~----~H~~~Gm~~~~~v~~~~~ 362 (377)
++ .|.+.||||.. .|...||.|.++|++..+
T Consensus 125 ~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~ 160 (534)
T 3abg_A 125 RQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAE 160 (534)
T ss_dssp CSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTT
T ss_pred CCcceeEEEecCccccchhhhhhcceEEEEEECCcc
Confidence 87 48999999984 578899999999987654
No 84
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=97.92 E-value=1.7e-05 Score=78.83 Aligned_cols=92 Identities=17% Similarity=0.111 Sum_probs=64.0
Q ss_pred eeeeeccCceEEEEEeecCCCC-------------------CCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCc
Q 017112 253 RLSKIAFNSTIELVLQDTNLLT-------------------VESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIE 313 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~-------------------~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~ 313 (377)
+.++++.|+++++.+.|..... ...+.+|+||-... ...+| ...
T Consensus 58 PtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsiHwHGl~~~--~~~DG----~p~----------- 120 (513)
T 2wsd_A 58 PTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVVHLHGGVTP--DDSDG----YPE----------- 120 (513)
T ss_dssp CBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCEEEETCCCC--GGGSC----CTT-----------
T ss_pred ceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEEEcCCCcCC--CccCC----CCc-----------
Confidence 4689999999999999974210 02788999997532 11111 100
Q ss_pred ccee---eeCCC---CEEEEEEEcC-CceeeEeeechH----HHHhccceeEEEEeCCCC
Q 017112 314 RNTA---AVPTG---GWTAIRFRAD-NPGVWFMHCHLE----LHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 314 rDtv---~v~~~---~~~~i~~~~d-~pG~w~~HCHi~----~H~~~Gm~~~~~v~~~~~ 362 (377)
+.| .|.+| +..+.+|.++ .+|.+.||||.. .|...||.|.++|++..+
T Consensus 121 -~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~ 179 (513)
T 2wsd_A 121 -AWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKE 179 (513)
T ss_dssp -SCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGG
T ss_pred -ccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccc
Confidence 011 34455 6669999986 589999999984 488999999999987543
No 85
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.87 E-value=5.4e-05 Score=76.38 Aligned_cols=88 Identities=13% Similarity=0.081 Sum_probs=70.3
Q ss_pred eEEEcCCCCCCCCCCCCceeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCC--------------------
Q 017112 10 AHTINGKPGPLFPCSEKHTFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV-------------------- 69 (377)
Q Consensus 10 ~~liNG~~~~~~~~~~~~~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~-------------------- 69 (377)
.+.|||+. ....+.++++.|++.+|+|+|.+.. ..-|.|.+|.|.|++.+|.
T Consensus 460 ~~~iNG~~-------~~~~~~~~v~~G~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~ 531 (612)
T 2g23_A 460 TYRRTAAT-------FNDGLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp EEEEEECS-------TTSCCCEEEETTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred EEEECCcc-------CCCCCceEecCCCEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCccccccccc
Confidence 46788875 1235789999999999999999854 5679999999999987531
Q ss_pred ----cc---CceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 70 ----YT---KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 70 ----~v---~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
++ ++...|.+.|.|||++.|.++++..+|.|.+...
T Consensus 532 g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCH 574 (612)
T 2g23_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCH 574 (612)
T ss_dssp EEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEES
T ss_pred ccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeC
Confidence 12 2346899999999999999999855798887655
No 86
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.83 E-value=3.5e-05 Score=61.50 Aligned_cols=75 Identities=20% Similarity=0.287 Sum_probs=51.4
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|++.|. .|.+..+... ... -...+.+.+|+...+.| +.
T Consensus 24 ~i~V~~GDtVtf~n~~~------~H~v~~~~~~----------~P~-------------g~~~f~s~pGet~s~TF--~~ 72 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK------GHNSALMKGG----------APE-------------GAETWKGKINEEITVTL--SK 72 (127)
T ss_dssp EEEECTTCEEEEECSSS------SCCCEECTTC----------SCT-------------TCCCCBCCTTCCCEEEC--CS
T ss_pred EEEECCCCEEEEEECCC------CceEEEccCc----------CCC-------------CccceecCCCCEEEEEe--CC
Confidence 57899999999987652 3666554211 000 00112335677655555 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDGP 361 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~~ 361 (377)
||.|.|||- .|..+||.+.+.|.++.
T Consensus 73 pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 73 PGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999999 69999999999998654
No 87
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.82 E-value=7e-05 Score=59.37 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=52.3
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|++.|. .|.+.++.. ... .. .+.+.+.+++...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~~------~H~v~~~~~----------~~P-----~g--------~~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTDK------SHNVEAIKE----------ILP-----EG--------VESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESST------TCCCEECTT----------SSC-----TT--------CCCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECCC------CceEEEcCC----------cCC-----CC--------ccceecCCCCEEEEEe--CC
Confidence 57899999999998762 366665421 000 00 0112345777666666 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
||.|.|+|- .|...||.+.+.|.+.
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 999999999 8999999999999763
No 88
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.74 E-value=7.6e-05 Score=59.15 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=52.0
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+..+ ..|.+..+... +.. -.+.+.+.+|+...+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~~----------~p~-------------g~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVREV----------WPE-------------GVAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTTT----------SCT-------------TSCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCCc----------CCC-------------CccccccCCCCEEEEEe--CC
Confidence 5789999999998553 35777665221 100 00122345777666655 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
||.|.|||- .|..+||.+.+.|.++
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 999999996 8999999999999763
No 89
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.70 E-value=0.00014 Score=55.17 Aligned_cols=80 Identities=24% Similarity=0.363 Sum_probs=53.6
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+ |.+ ...|.+.++...+ |..++. ...-.+...+.+|+...+.| +.
T Consensus 19 ~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~~---------------p~g~~~-~~~~~~~~~~~~g~~~~~tf--~~ 75 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNA---GFPHNIVFDEDAV---------------PAGVDA-DAISYDDYLNSKGETVVRKL--ST 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECTTSS---------------CTTCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEeCCCC---------------cccccc-ccccccccccCCCCEEEEEc--CC
Confidence 5789999999986 543 3467666554110 000000 00012346788999877766 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|+|-+ |..+||.+.+.|+
T Consensus 76 ~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999986 9999999999874
No 90
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.67 E-value=0.00015 Score=55.89 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=49.7
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+ |.+ ...|.+++....- |. . .+ +.-.+.+|+...+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~~-------~-------~~-~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------GE-------D-------AF-RGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------SS-------S-------CE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------Cc-------c-------cc-cccccCCCCEEEEEe--CC
Confidence 5789999999987 653 3467766653210 00 0 01 233567888777766 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|+|-+ |. ||.+.+.|+
T Consensus 86 ~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 86 AGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999987 76 999999873
No 91
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.56 E-value=0.00023 Score=57.14 Aligned_cols=72 Identities=19% Similarity=0.207 Sum_probs=50.4
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+ |.+ ...|.+++....- |. ..+ +.-.+.+|+...+.| +.
T Consensus 61 ~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~~-------g~--------------~~~-~s~~l~pG~t~~~tF--~~ 111 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------GE--------------DAF-RGEMMTKDQAYAITF--NE 111 (132)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------SS--------------SCE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCceEEEEeCCCC-------Cc--------------ccc-cccccCCCCEEEEEc--CC
Confidence 5789999999986 653 3468777643210 00 001 233567888777776 79
Q ss_pred ceeeEeeechHHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
||.|.|||-+ |. ||.+.+.|+
T Consensus 112 ~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 112 AGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--Cc--CCEEEEEEC
Confidence 9999999987 76 999999874
No 92
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=97.29 E-value=0.00088 Score=52.99 Aligned_cols=74 Identities=18% Similarity=0.272 Sum_probs=48.6
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+..+. .|.+.++- + .. +.. . ..+.+.+|+...+ .++.
T Consensus 22 ~i~V~~GdtV~f~~~~~------~H~v~~~~--------~--~~-p~~-~-----------~~~~~~pG~t~~~--tF~~ 70 (123)
T 1paz_A 22 YIKANPGDTVTFIPVDK------GHNVESIK--------D--MI-PEG-A-----------EKFKSKINENYVL--TVTQ 70 (123)
T ss_dssp EEEECTTCEEEEEESSS------SCCCEECT--------T--CS-CTT-C-----------CCCBCCTTCCEEE--ECCS
T ss_pred EEEECCCCEEEEEECCC------CeEEEEec--------c--cC-CCC-c-----------cceecCCCCEEEE--EeCC
Confidence 57889999999875541 36665531 0 00 000 0 0122346775554 4589
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
||.|.|+|. .|..+||.+.|.|.+.
T Consensus 71 ~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 71 PGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 999999997 5999999999999763
No 93
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.28 E-value=0.00031 Score=58.51 Aligned_cols=90 Identities=9% Similarity=0.128 Sum_probs=61.4
Q ss_pred eeee-ccCceEEEEEeecCCC--CCCCCCeeecCCceEEEEecC-----------C--CCCCCCCCCCCCCCCCCcccee
Q 017112 254 LSKI-AFNSTIELVLQDTNLL--TVESHPFHLHGYNFFVVGTGI-----------G--NFDPVKYPANYNLVDPIERNTA 317 (377)
Q Consensus 254 ~~~~-~~g~~v~~~l~n~~~~--~~~~Hp~HlHg~~f~vl~~g~-----------g--~~~~~~~~~~~~~~np~~rDtv 317 (377)
.+.| +.|+.|.|+|.|.+.. .++.|- |-+...+. + .|-+.. +.-....+.
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~~~~~v~~~~m~~~~~~~v~~~-------d~~vl~~t~ 124 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAEDMDGVFKDGVGAADTDYVKPD-------DARVVAHTK 124 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGGGHHHHHHHHGGGGGGTTSCTT-------CTTEEEECC
T ss_pred eEEEecCCCEEEEEEEECCCCccccccce-------EEeccCcchhhhHHHhhhcccccccccc-------ccchhccce
Confidence 4788 8999999999997632 011244 43333210 0 000000 001134566
Q ss_pred eeCCCCEEEEEEEcC--CceeeEeeechHHHHhccceeEEEEe
Q 017112 318 AVPTGGWTAIRFRAD--NPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 318 ~v~~~~~~~i~~~~d--~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.|.+|+...+.|.++ .||.|-|+|-+--|.. ||-+.|.|.
T Consensus 125 ~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 789999999999988 8999999999999988 999999986
No 94
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=97.27 E-value=0.00079 Score=53.28 Aligned_cols=74 Identities=20% Similarity=0.316 Sum_probs=48.8
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+..+. .|.+.++. + ..... . ..+.+.+|+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~n~~~------~H~v~~~~--------~--~~p~~--~-----------~~~~~~pG~t~~~tF--~~ 70 (123)
T 1pmy_A 22 LVRLKPGDSIKFLPTDK------GHNVETIK--------G--MAPDG--A-----------DYVKTTVGQEAVVKF--DK 70 (123)
T ss_dssp EEEECTTCEEEEECSSS------SCCCEECT--------T--SSCTT--C-----------CCCBCCTTSCEEEEC--CS
T ss_pred EEEECCCCEEEEEECCC------CcEEEEec--------c--cCCCC--c-----------cceecCCCCEEEEEe--CC
Confidence 57889999999875431 45555431 0 00000 0 112345777655554 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
||.|.|+|. .|...||.+.|.|.+.
T Consensus 71 ~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 71 EGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred CeEEEEEeC--CccccCCEEEEEEcCC
Confidence 999999998 5999999999999754
No 95
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.24 E-value=0.001 Score=65.49 Aligned_cols=79 Identities=16% Similarity=0.256 Sum_probs=61.5
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
..+.++.|+.|+|++.|.....+..|.|.+.+.... +.+.||....+.|.++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------------------eeeCCCCeEEEEEEcC
Confidence 357889999999999996432356788887765432 2577889999999999
Q ss_pred CceeeEeeechHHHH-hccceeEEEEeC
Q 017112 333 NPGVWFMHCHLELHT-GWGLKTAFAVED 359 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~-~~Gm~~~~~v~~ 359 (377)
.||.|.+||...-|. ..+|.+.+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999975443 368999999874
No 96
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.20 E-value=0.00056 Score=55.34 Aligned_cols=70 Identities=23% Similarity=0.330 Sum_probs=52.3
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCC-----------------CccC----ceEecEEEeCCCCE
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDA-----------------VYTK----PFTTEAILIAPGQT 86 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG-----------------~~v~----P~~v~~l~l~~GqR 86 (377)
+..|+|++|++++|+|.|.+... .|+|.+...+. .++. ....+...|.+||+
T Consensus 34 p~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet 106 (139)
T 2aan_A 34 KTELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNET 106 (139)
T ss_dssp CSEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCE
T ss_pred CCeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCE
Confidence 56899999999999999998642 67777765321 2221 13345677999999
Q ss_pred EEEEEEeCCCCCceeEEee
Q 017112 87 TNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 87 ~dvlv~~~~~~g~y~l~~~ 105 (377)
+++.+++++ +|.|++...
T Consensus 107 ~~v~f~~~~-pG~y~f~C~ 124 (139)
T 2aan_A 107 VEVTFTAPA-AGTYLYICT 124 (139)
T ss_dssp EEEEEECCS-SEEEEEECC
T ss_pred EEEEEECCC-CeEEEEEcC
Confidence 999999874 799988754
No 97
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.17 E-value=0.0021 Score=51.16 Aligned_cols=90 Identities=12% Similarity=0.216 Sum_probs=61.7
Q ss_pred eeeeccC-ceEEEEEeecCCCC--CCCCCeeecCCceEEEEecC-----------C---CCCCCCCCCCCCCCCCCccce
Q 017112 254 LSKIAFN-STIELVLQDTNLLT--VESHPFHLHGYNFFVVGTGI-----------G---NFDPVKYPANYNLVDPIERNT 316 (377)
Q Consensus 254 ~~~~~~g-~~v~~~l~n~~~~~--~~~Hp~HlHg~~f~vl~~g~-----------g---~~~~~~~~~~~~~~np~~rDt 316 (377)
.+.|+.| +.|.+++.|.+.+. ++.|- |-+...+. | .|-+..+ .-....+
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~-------~~~~~~t 84 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSADVGDVAKEGAHAGADNNFVTPGD-------KRVIAFT 84 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGGHHHHHHHHHTTCGGGTTSCTTC-------TTCSEEC
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcchhhhHHHhhhcccccccccccc-------ccceeee
Confidence 5889999 99999999976321 12344 44433220 0 0100000 0012346
Q ss_pred eeeCCCCEEEEEEEcC---CceeeEeeechHHHHhccceeEEEEe
Q 017112 317 AAVPTGGWTAIRFRAD---NPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 317 v~v~~~~~~~i~~~~d---~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
..|.||+...+.|.++ .||.|-|.|-+--|.. ||-+.+.|+
T Consensus 85 ~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 85 PIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp CCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 6789999999999997 9999999999989988 899999886
No 98
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.96 E-value=0.0029 Score=50.80 Aligned_cols=71 Identities=20% Similarity=0.362 Sum_probs=53.0
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|+.|+|.+.|.+ ..|.|.+-...+ -+.+.||....+.|.++.
T Consensus 61 ~l~Vp~G~~V~~~vts~D----V~Hsf~ip~~~~----------------------------k~d~~PG~~~~~~~~~~~ 108 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD----VIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKR 108 (135)
T ss_dssp SEEEETTSEEEEEEEBSS----SCEEEEETTSSC----------------------------EEEECBTBCEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEeCC----ccceEEecCCCc----------------------------eeEeCCCCcEEEEEEcCC
Confidence 478999999999999853 455554322111 134567777889999999
Q ss_pred ceeeEeeech---HHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHL---ELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi---~~H~~~Gm~~~~~v~ 358 (377)
||.|.++|.. ..| .+|.+.+.|.
T Consensus 109 ~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 109 PGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp CEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred CEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 9999999976 667 5999988875
No 99
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=96.70 E-value=0.0029 Score=50.36 Aligned_cols=89 Identities=12% Similarity=0.209 Sum_probs=59.8
Q ss_pred eeee-ccCceEEEEEeecCCC--CCCCCCeeecCCceEEEEecC-----------C---CCCCCCCCCCCCCCCC-Cccc
Q 017112 254 LSKI-AFNSTIELVLQDTNLL--TVESHPFHLHGYNFFVVGTGI-----------G---NFDPVKYPANYNLVDP-IERN 315 (377)
Q Consensus 254 ~~~~-~~g~~v~~~l~n~~~~--~~~~Hp~HlHg~~f~vl~~g~-----------g---~~~~~~~~~~~~~~np-~~rD 315 (377)
.+.| +.|+.|.+++.|.+.+ .++.|- |-+...+. | .|-+. .++ ....
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~-------~vi~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 83 (129)
T 2ccw_A 19 EIVVDKSCKQFTMHLKHVGKMAKVAMGHN-------LVLTKDADKQAVATDGMGAGLAQDYVKA--------GDTRVIAH 83 (129)
T ss_dssp EEEECTTCSEEEEEEEECSCCCHHHHCBC-------CEEEEGGGHHHHHHHHHHHCGGGTTSCT--------TCTTEEEE
T ss_pred eEEEecCCCEEEEEEEECCCcccccCcce-------EEEcCccchhhhHHHhhhhccccccccc--------ccccceee
Confidence 4788 8899999999997632 012244 44333220 0 01000 011 1234
Q ss_pred eeeeCCCCEEEEEEEcC--Ccee-eEeeechHHHHhccceeEEEEe
Q 017112 316 TAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 316 tv~v~~~~~~~i~~~~d--~pG~-w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
+..|.||+...+.|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 84 t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 84 TKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp CCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 55789999999999998 7866 999999999988 899999885
No 100
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.57 E-value=0.0067 Score=47.77 Aligned_cols=72 Identities=18% Similarity=0.191 Sum_probs=47.3
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|++|+|+..+ . .|.++++.- .+... . ..+.+.+|+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~n~d-----~-~H~v~~~~~----------~~p~~--~-----------~~~~~~~g~t~~~tF--~~ 70 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTD-----K-GHNVETIKG----------MIPDG--A-----------EAFKSKINENYKVTF--TA 70 (122)
T ss_dssp EEEECTTEEEEEEESS-----S-SCCCEECTT----------CSCTT--C-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC-----C-CcEEEEccc----------ccCCC--c-----------ceeecCCCCEEEEEe--CC
Confidence 5788999999987432 1 466666531 11100 0 012335677666665 89
Q ss_pred ceeeEeeechHHHHhccceeEEEEeCC
Q 017112 334 PGVWFMHCHLELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 334 pG~w~~HCHi~~H~~~Gm~~~~~v~~~ 360 (377)
||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 71 ~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 71 PGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp CEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 9999999987 765 9999999763
No 101
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=96.56 E-value=0.012 Score=59.53 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=61.7
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc---------------------------CceEecEEE
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT---------------------------KPFTTEAIL 80 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v---------------------------~P~~v~~l~ 80 (377)
...+.++.|++++|.|+|.+.. ..-|.|.||.|+||+.+|... +|-.-|++.
T Consensus 471 ~~~~~~~~g~~~~w~i~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~ 549 (612)
T 3gyr_A 471 GLGFTIGEGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQ 549 (612)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEE
T ss_pred CcceEeCCCCEEEEEEEcCCCC-CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEE
Confidence 4568899999999999999875 456999999999999766422 222468999
Q ss_pred eCCCCEEEEEEEeCCCCCceeEEee
Q 017112 81 IAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 81 l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+.+|+.+.|.+++...+|.|.+...
T Consensus 550 v~~~~~v~i~~rfadnpG~w~~HCH 574 (612)
T 3gyr_A 550 VPGPQGLRVMGKFDGAYGRFMYHCH 574 (612)
T ss_dssp ECSSEEEEEEEECCSCCEEEEEEES
T ss_pred ECCCCEEEEEEEeCCCCcceEEcCC
Confidence 9999999999996555788777654
No 102
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.50 E-value=0.013 Score=45.22 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=46.5
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEeec
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARP 106 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~~ 106 (377)
++.++|++|+++||++.|.... ...|.+.+. |. ...+.|||.+++.+++++ +|.|+.....
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~~--------~~~i~pG~~~~~~f~~~~-~G~y~~~C~~ 97 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------GV--------QEVIKAGETKTISFTADK-AGAFTIWCQL 97 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------TE--------EEEECTTCEEEEEEECCS-CEEEEEBCSS
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------Cc--------eeEeCCCCEEEEEEECCC-CEEEEEECCC
Confidence 4689999999999999999854 333444332 21 567999999999999875 7999987653
No 103
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=96.49 E-value=0.0076 Score=47.86 Aligned_cols=43 Identities=16% Similarity=0.323 Sum_probs=38.3
Q ss_pred ceeeeCCCCEEEEEEEcC--Ccee-eEeeechHHHHhccceeEEEEe
Q 017112 315 NTAAVPTGGWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 315 Dtv~v~~~~~~~i~~~~d--~pG~-w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.+..|.+|+...+.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 82 ~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 82 HTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp ECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 456789999999999998 8995 999999999988 999999885
No 104
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.37 E-value=0.013 Score=48.80 Aligned_cols=73 Identities=18% Similarity=0.264 Sum_probs=56.8
Q ss_pred eeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcCC
Q 017112 254 LSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRADN 333 (377)
Q Consensus 254 ~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d~ 333 (377)
.+.++.|+.|+|.+.|. +..|.|.+-..... +.+.||....+.|.++.
T Consensus 94 ~l~VP~G~~Vr~~vTS~----DViHsf~IP~lgik----------------------------~da~PG~~n~~~~~~~k 141 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSP----DVIHGFHVEGTNIN----------------------------VEVLPGEVSTVRYTFKR 141 (168)
T ss_dssp SEEEETTSEEEEEEECS----SSCEEEEETTSSCE----------------------------EEECTTBCEEEEEECCS
T ss_pred EEEEeCCCeEEEEEecC----CceEEEEECCCCeE----------------------------EEecCCceeEEEEEeCC
Confidence 47899999999999985 45687776543221 23457887889999999
Q ss_pred ceeeEeeech-HHHHhccceeEEEEe
Q 017112 334 PGVWFMHCHL-ELHTGWGLKTAFAVE 358 (377)
Q Consensus 334 pG~w~~HCHi-~~H~~~Gm~~~~~v~ 358 (377)
||.|.+.|.. .-+...+|.+.+.|+
T Consensus 142 pG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 142 PGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp CEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred CEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 9999999984 555668999999886
No 105
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=96.32 E-value=0.013 Score=46.53 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=59.7
Q ss_pred eeee-ccCceEEEEEeecCCCC--CCCCCeeecCCceEEEEecCC------CCCCCCCCCCC-CCCCC-CccceeeeCCC
Q 017112 254 LSKI-AFNSTIELVLQDTNLLT--VESHPFHLHGYNFFVVGTGIG------NFDPVKYPANY-NLVDP-IERNTAAVPTG 322 (377)
Q Consensus 254 ~~~~-~~g~~v~~~l~n~~~~~--~~~Hp~HlHg~~f~vl~~g~g------~~~~~~~~~~~-~~~np-~~rDtv~v~~~ 322 (377)
.+.| +.|++|.+++.|.+.+. .+.|-|- +...+.- ....... ..+ .-.++ ....+-.|.||
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~v-------i~~~~~~~~~~~~~m~~~~~-~~~~~~~~~~~~~~t~~l~pG 90 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLV-------ISKEADMQPIATDGLSAGID-KQYLKDGDARVIAHTKVIGAG 90 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCE-------EEEGGGHHHHHHHHTTTCGG-GTTSCTTCTTEEEECCCBCTT
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEE-------EccccchhhHHHHHhhcccc-ccccccccchhheeeeeeCCC
Confidence 4788 89999999999976320 1125443 3322100 0000000 000 00011 12345578999
Q ss_pred CEEEEEEEcC--Ccee-eEeeechHHHHhccceeEEEEe
Q 017112 323 GWTAIRFRAD--NPGV-WFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 323 ~~~~i~~~~d--~pG~-w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
+...+.|.+. .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 91 et~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 91 EKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp CEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred CEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 9999999998 7876 999999999988 899999873
No 106
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.82 E-value=0.033 Score=43.75 Aligned_cols=96 Identities=15% Similarity=0.250 Sum_probs=59.3
Q ss_pred eeeecc-CceEEEEEeecCCCCCCCCCeeecCCceEEEEecC--CCC-CC-CCCC-CCC-C-CCCCCccceeeeCCCCEE
Q 017112 254 LSKIAF-NSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGI--GNF-DP-VKYP-ANY-N-LVDPIERNTAAVPTGGWT 325 (377)
Q Consensus 254 ~~~~~~-g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~--g~~-~~-~~~~-~~~-~-~~np~~rDtv~v~~~~~~ 325 (377)
.+.++. |+.|+++|.|.+.+ |--.=||.|-+...+. +-. +. ...+ ..| . -+....-.|..|.+|+..
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 578875 99999999998643 1111245655543210 000 00 0000 001 0 012234567789999999
Q ss_pred EEEEEcC---CceeeEeeechHHHHhccceeEEEEe
Q 017112 326 AIRFRAD---NPGVWFMHCHLELHTGWGLKTAFAVE 358 (377)
Q Consensus 326 ~i~~~~d---~pG~w~~HCHi~~H~~~Gm~~~~~v~ 358 (377)
.+.|.+. .+|.|-|-|. -|. ||-|.+.|.
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999987 8999999999 888 999999873
No 107
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=95.14 E-value=0.045 Score=43.92 Aligned_cols=71 Identities=15% Similarity=0.302 Sum_probs=48.6
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeC----------------CCccC-----ceEecEEEeCCCCE
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVD----------------AVYTK-----PFTTEAILIAPGQT 86 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~D----------------G~~v~-----P~~v~~l~l~~GqR 86 (377)
+..|+|++|++++|++.|..... -.|++.+...+ ..++. ....++..|.+|+.
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~------~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~ 105 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLG------VQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGES 105 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSC------CCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEE
T ss_pred CCeEEECCCCEEEEEEECCCCCC------CceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCce
Confidence 56899999999999999932111 24555554211 12221 23345678999999
Q ss_pred EEEEEEeCCCCCceeEEee
Q 017112 87 TNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 87 ~dvlv~~~~~~g~y~l~~~ 105 (377)
.++.++++. +|.|+....
T Consensus 106 ~~~~~~~~~-~G~y~f~C~ 123 (140)
T 1qhq_A 106 GSVTFRTPA-PGTYLYICT 123 (140)
T ss_dssp EEEEEECCS-SEEEEEECC
T ss_pred eEEEEEeCC-CeeEEEEeC
Confidence 999999975 799988755
No 108
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.11 E-value=0.017 Score=45.85 Aligned_cols=78 Identities=13% Similarity=0.145 Sum_probs=47.0
Q ss_pred eeEEEE-eCCCEEEEEEEecCCCC----eEEEEEcCce-EEEEE-------eCCCccCceE----ecEEEeCCCCEEEEE
Q 017112 28 TFAMEV-ESGKTYLLRIINAALND----ELFFAIAGHN-FTVVE-------VDAVYTKPFT----TEAILIAPGQTTNVL 90 (377)
Q Consensus 28 ~~~i~v-~pG~~yRlRlINa~~~~----~~~~~idgh~-~~VIa-------~DG~~v~P~~----v~~l~l~~GqR~dvl 90 (377)
+..|+| ++|++++|.+.|.+... ..+|.|.+.. +.-++ .|-.++.+-. ...-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (129)
T 2ccw_A 17 VKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVT 96 (129)
T ss_dssp CSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEE
Confidence 568999 99999999999999652 2333332211 00000 0112332111 123368999999999
Q ss_pred EEeC--CCCCceeEEee
Q 017112 91 VQAN--QKPGRYFMAAR 105 (377)
Q Consensus 91 v~~~--~~~g~y~l~~~ 105 (377)
++++ ++.++|+..-.
T Consensus 97 f~~~~l~~G~~Y~f~C~ 113 (129)
T 2ccw_A 97 FDVSKIAAGENYAYFCS 113 (129)
T ss_dssp EEGGGSCTTCCEEEECC
T ss_pred EeccccCCCceEEEEeC
Confidence 9987 54456988643
No 109
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=95.05 E-value=0.088 Score=39.47 Aligned_cols=60 Identities=17% Similarity=0.331 Sum_probs=45.3
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..|+|++|+++||++.|.+... ..|.+++... ...+.+|+..++-+++++ +|.|...-.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~~-H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~-~G~Y~y~C~ 86 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKSE-HTFTIKKLGI----------------DVVVESGKEKNITVKPKS-AGTYELICR 86 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSSC-EEEEEGGGTE----------------EEEECTTCEEEEEECCCS-CEEEEEECT
T ss_pred CCEEEECCCCEEEEEEEcCCCce-EEEEEecCCc----------------ceeecCCcceeEEEeccc-CceEEEECc
Confidence 45899999999999999987543 3455544322 245789999999998875 799988754
No 110
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.04 E-value=0.019 Score=45.52 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=46.9
Q ss_pred eeEEEE-eCCCEEEEEEEecCCCC----eEEEEEcCce-EEEEEe-------CCCccCceE----ecEEEeCCCCEEEEE
Q 017112 28 TFAMEV-ESGKTYLLRIINAALND----ELFFAIAGHN-FTVVEV-------DAVYTKPFT----TEAILIAPGQTTNVL 90 (377)
Q Consensus 28 ~~~i~v-~pG~~yRlRlINa~~~~----~~~~~idgh~-~~VIa~-------DG~~v~P~~----v~~l~l~~GqR~dvl 90 (377)
+..|+| ++|++++|.+.|.+... ..+|.|++.. +.-++. |-.++.+-. .+.-.|+|||++++.
T Consensus 17 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svt 96 (128)
T 1nwp_A 17 TKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVT 96 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEE
Confidence 568999 99999999999999652 2333332210 000001 113332211 122359999999999
Q ss_pred EEeC--CCCCceeEEee
Q 017112 91 VQAN--QKPGRYFMAAR 105 (377)
Q Consensus 91 v~~~--~~~g~y~l~~~ 105 (377)
++++ ++.++|+..-.
T Consensus 97 f~~~~l~~G~~Y~f~C~ 113 (128)
T 1nwp_A 97 FDVSKLAAGEKYGFFCS 113 (128)
T ss_dssp EEGGGSCTTSCEEEECC
T ss_pred EeccccCCCceEEEEEC
Confidence 9986 43345988643
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.83 E-value=0.15 Score=40.20 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=46.1
Q ss_pred eeEEEE-eCCCEEEEEEEecCCCC----eEEEEEcCce-EEEEE-------eCCCccCce----EecEEEeCCCCEEEEE
Q 017112 28 TFAMEV-ESGKTYLLRIINAALND----ELFFAIAGHN-FTVVE-------VDAVYTKPF----TTEAILIAPGQTTNVL 90 (377)
Q Consensus 28 ~~~i~v-~pG~~yRlRlINa~~~~----~~~~~idgh~-~~VIa-------~DG~~v~P~----~v~~l~l~~GqR~dvl 90 (377)
+..|+| ++|++++|.+.|.+... ..+|.|+... +.-++ .|-.++.+- -.+.-.|++||++++.
T Consensus 16 p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vt 95 (128)
T 2iaa_C 16 TKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVT 95 (128)
T ss_dssp CSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEE
Confidence 568999 99999999999999652 2333332110 00000 111333211 1233368999999999
Q ss_pred EEeCC-CCC-ceeEEe
Q 017112 91 VQANQ-KPG-RYFMAA 104 (377)
Q Consensus 91 v~~~~-~~g-~y~l~~ 104 (377)
++++. .+| +|+..-
T Consensus 96 f~~~~l~~G~~Y~f~C 111 (128)
T 2iaa_C 96 FDVSKLKEGEDYAFFC 111 (128)
T ss_dssp EESSCCCTTCCEEEEC
T ss_pred EeccccCCCceEEEEE
Confidence 99872 256 698764
No 112
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.79 E-value=0.0066 Score=47.73 Aligned_cols=78 Identities=18% Similarity=0.284 Sum_probs=48.9
Q ss_pred eeEEEEeC-CCEEEEEEEecCCCC----eEEEEEcCc-eEEEEEe-------CCCccCc----eEecEEEeCCCCEEEEE
Q 017112 28 TFAMEVES-GKTYLLRIINAALND----ELFFAIAGH-NFTVVEV-------DAVYTKP----FTTEAILIAPGQTTNVL 90 (377)
Q Consensus 28 ~~~i~v~p-G~~yRlRlINa~~~~----~~~~~idgh-~~~VIa~-------DG~~v~P----~~v~~l~l~~GqR~dvl 90 (377)
+..|+|++ |+++||.|.|.+... ..+|.|... .+.-++. |-.|+++ +-.+.-.|++||.+++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 56899975 999999999999753 233333211 0100011 3355532 22344469999999999
Q ss_pred EEeCC--CCCceeEEee
Q 017112 91 VQANQ--KPGRYFMAAR 105 (377)
Q Consensus 91 v~~~~--~~g~y~l~~~ 105 (377)
++++. .+|+|...-.
T Consensus 97 f~~~~l~~~G~y~f~C~ 113 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFFCA 113 (125)
T ss_dssp EEGGGC---CCEEEECS
T ss_pred EeCcCcCCCccEEEEcC
Confidence 99973 4799887644
No 113
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.66 E-value=0.089 Score=41.65 Aligned_cols=75 Identities=16% Similarity=0.230 Sum_probs=47.9
Q ss_pred eeEEEEeCC-CEEEEEEEecCCCCeEEEEEcCceEEEEEeC---------------CCccCce----EecEEEeCCCCEE
Q 017112 28 TFAMEVESG-KTYLLRIINAALNDELFFAIAGHNFTVVEVD---------------AVYTKPF----TTEAILIAPGQTT 87 (377)
Q Consensus 28 ~~~i~v~pG-~~yRlRlINa~~~~~~~~~idgh~~~VIa~D---------------G~~v~P~----~v~~l~l~~GqR~ 87 (377)
+..|+|++| ++++|.+.|.+...- ..-+|+|.+.... -.++.+- -...-.|+|||++
T Consensus 17 p~~i~V~~G~~~vtv~~~N~g~~~~---~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~ 93 (129)
T 1cuo_A 17 TRSISVPASCAEFTVNFEHKGHMPK---TGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKT 93 (129)
T ss_dssp CSEEEEETTCSEEEEEEEECSSSCH---HHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEE
T ss_pred cCeEEEcCCCeEEEEEEEECCCCcc---cccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEE
Confidence 568999999 999999999986420 0013444333211 0222111 1123458999999
Q ss_pred EEEEEeC--CCCCceeEEee
Q 017112 88 NVLVQAN--QKPGRYFMAAR 105 (377)
Q Consensus 88 dvlv~~~--~~~g~y~l~~~ 105 (377)
++.++++ ..+|.|+..-.
T Consensus 94 svtf~~~~~~~~G~Y~f~C~ 113 (129)
T 1cuo_A 94 SVKFKVSALSKDEAYTYFCS 113 (129)
T ss_dssp EEEEEGGGCCTTSCEEEECC
T ss_pred EEEEeccccCCCceEEEEeC
Confidence 9999987 24799998643
No 114
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=94.52 E-value=0.083 Score=43.23 Aligned_cols=75 Identities=19% Similarity=0.183 Sum_probs=43.2
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCc--eEEEEEeCCCccCceEecEEEeCCCC--EEEEEEEeCCCCCceeEE
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGH--NFTVVEVDAVYTKPFTTEAILIAPGQ--TTNVLVQANQKPGRYFMA 103 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh--~~~VIa~DG~~v~P~~v~~l~l~~Gq--R~dvlv~~~~~~g~y~l~ 103 (377)
.+.|+|++|++++|++.|.+......|.+... .+.....+ ..+.+..-....|.||| ..++-+++ + +|.||..
T Consensus 60 ~p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sgt~t~tft~-~-pGtY~y~ 136 (154)
T 2cal_A 60 NPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFGYTDFTWHP-T-AGTYYYV 136 (154)
T ss_dssp SCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEEEEEEEECC-C-SEEEEEE
T ss_pred CCEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCceEEEEEEEE-C-CceEEEE
Confidence 57999999999999999974322333333311 11000000 00000000011679999 88888887 4 7999987
Q ss_pred ee
Q 017112 104 AR 105 (377)
Q Consensus 104 ~~ 105 (377)
..
T Consensus 137 C~ 138 (154)
T 2cal_A 137 CQ 138 (154)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 115
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=94.48 E-value=0.019 Score=43.51 Aligned_cols=73 Identities=12% Similarity=0.223 Sum_probs=44.4
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
.+.|++++|++++ ++|.+.. ...+.+.+..+.. .+|..-.....+.+.|.+||++++-++++..+|.||....
T Consensus 18 p~~i~v~~Gd~V~--~~N~~~~-~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 18 PANVTVHPGDTVK--WVNNKLP-PHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SSEEEECTTEEEE--EEECSSC-CEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred CCEEEEcCCCEEE--EEECCCC-CCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 5689999999775 4688643 3344444332110 0010000112467899999999997776445799999765
No 116
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=94.40 E-value=0.065 Score=44.41 Aligned_cols=75 Identities=21% Similarity=0.431 Sum_probs=47.9
Q ss_pred eeEEEE-eCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeC--------------CCccCc----eEecEEEeCCCCEEE
Q 017112 28 TFAMEV-ESGKTYLLRIINAALNDELFFAIAGHNFTVVEVD--------------AVYTKP----FTTEAILIAPGQTTN 88 (377)
Q Consensus 28 ~~~i~v-~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~D--------------G~~v~P----~~v~~l~l~~GqR~d 88 (377)
+..|+| ++|++++|.|.|.+...- .--+|+|.+...+ -.++.+ +..+.-.|.+||+++
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~---~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPK---ASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCH---HHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCcc---ccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 568999 999999999999986420 0003444333211 123321 112334689999999
Q ss_pred EEEEeCC-CCCceeEEee
Q 017112 89 VLVQANQ-KPGRYFMAAR 105 (377)
Q Consensus 89 vlv~~~~-~~g~y~l~~~ 105 (377)
|.++++. .+|.|+..-.
T Consensus 134 vtf~~~~lkpG~Y~f~Ct 151 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACT 151 (167)
T ss_dssp EEECGGGGTTSCEEEECC
T ss_pred EEEecCCCCCcEEEEEcC
Confidence 9999862 3799988643
No 117
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=92.72 E-value=0.029 Score=42.58 Aligned_cols=67 Identities=21% Similarity=0.348 Sum_probs=41.9
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc------CceEecEEEeCCCCEEEEEEEeCCCCCcee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYT------KPFTTEAILIAPGQTTNVLVQANQKPGRYF 101 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v------~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~ 101 (377)
+..|+|++|++++|+ |.+.. .|.+.+... +.+. .....+.+.|.+||++++-++++..+|.|+
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~--------~H~~~~~~~-~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~ 87 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP--------PHNVVFDAA-LNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYT 87 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--------CCCBEECSS-SSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CceEEEeCC-CCcccccccchhccccceeeCCCCEEEEEEecCCCCceEE
Confidence 568999999988765 87632 255443211 1110 001135677999999999666534579999
Q ss_pred EEee
Q 017112 102 MAAR 105 (377)
Q Consensus 102 l~~~ 105 (377)
....
T Consensus 88 y~C~ 91 (106)
T 2gim_A 88 FYCE 91 (106)
T ss_dssp EECT
T ss_pred EEeC
Confidence 8754
No 118
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=91.39 E-value=0.13 Score=38.55 Aligned_cols=65 Identities=14% Similarity=0.211 Sum_probs=41.7
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCc--------cCceEecEEEeCCCCEEEEEEEeCCCCCc
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVY--------TKPFTTEAILIAPGQTTNVLVQANQKPGR 99 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~--------v~P~~v~~l~l~~GqR~dvlv~~~~~~g~ 99 (377)
+..|+|++|++++|+ |.+.. .|++.+..-|+.. ......+.+.+.+||.+++ +++ .+|.
T Consensus 16 P~~i~v~~G~tV~~~--n~~~~--------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~--tf~-~~G~ 82 (102)
T 1kdj_A 16 PDSITVSAGEAVEFT--LVGET--------GHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKA--KVS-TPGT 82 (102)
T ss_dssp SSEEEECTTCCEEEE--ECSSS--------CBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEE--CCC-SCEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCcccccccccchhhcccccccceecCCCCEEEE--EeC-CCeE
Confidence 568999999988765 87642 3555544333321 0011124577899999988 454 4799
Q ss_pred eeEEee
Q 017112 100 YFMAAR 105 (377)
Q Consensus 100 y~l~~~ 105 (377)
|+....
T Consensus 83 y~y~C~ 88 (102)
T 1kdj_A 83 YTFYCT 88 (102)
T ss_dssp EEEECS
T ss_pred EEEEeC
Confidence 988755
No 119
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=89.87 E-value=0.5 Score=34.81 Aligned_cols=64 Identities=23% Similarity=0.324 Sum_probs=41.4
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC--ceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK--PFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~--P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..++|++|++++|+ |.+.. .|++.+.+.+. +.. ....+.+.+.+||.+++- ++ .+|.|+....
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~t--f~-~~G~y~y~C~ 83 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG--------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVT--LG-TPGTYSFYCT 83 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEE--CC-SCSEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCCCC-ccccccccccceecCCCCEEEEE--eC-CCeEEEEEcc
Confidence 458999999987665 76631 46666554322 111 111356788999999884 44 4799988755
No 120
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.76 E-value=1.5 Score=43.70 Aligned_cols=62 Identities=21% Similarity=0.233 Sum_probs=47.6
Q ss_pred eeEEEEeCCCEEEEEEEecCCC--CeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALN--DELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~--~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
.+.|+|++|++++|++.|.... ....|.+.++.+ ...+.||+..++-+++++ +|.||....
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv----------------~~~i~PG~t~t~~Fta~~-pGtY~yhC~ 574 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGV----------------AMEIGPQMTSSVTFVAAN-PGVYWYYCQ 574 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------EEEECTTCEEEEEEECCS-CEEEEEECC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCc----------------ceeeCCCCeEEEEEECCC-CEEEEEECC
Confidence 5799999999999999996532 234555555431 157899999999999975 799999876
Q ss_pred c
Q 017112 106 P 106 (377)
Q Consensus 106 ~ 106 (377)
.
T Consensus 575 e 575 (595)
T 1fwx_A 575 W 575 (595)
T ss_dssp S
T ss_pred C
Confidence 3
No 121
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=89.30 E-value=1.3 Score=31.93 Aligned_cols=60 Identities=20% Similarity=0.366 Sum_probs=39.3
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..+++++|++++|+ |.+.. ...+.+.+ + .+...+...+.+|+.+++- ++ .+|.|+....
T Consensus 18 P~~i~v~~Gd~V~~~--n~~~~-~H~v~~~~---------~---~~~~~~~~~~~~g~~~~~~--f~-~~G~y~~~C~ 77 (91)
T 1bxv_A 18 PSTIEIQAGDTVQWV--NNKLA-PHNVVVEG---------Q---PELSHKDLAFSPGETFEAT--FS-EPGTYTYYCE 77 (91)
T ss_dssp SSEEEECTTCEEEEE--ECSSC-CEEEEETT---------C---GGGCEEEEECSTTCEEEEE--CC-SCEEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCCC-CcEEEEeC---------C---CccCcccceeCCCCEEEEE--eC-CCEEEEEEeC
Confidence 468999999988765 76532 23333333 1 1222456789999988874 44 4799998765
No 122
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=89.27 E-value=0.69 Score=34.04 Aligned_cols=68 Identities=21% Similarity=0.260 Sum_probs=40.8
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..++|++|++++| .|.+.. ...|.+.+..+ -+|..-.....+.+.+.+||++++ +++ .+|.|+....
T Consensus 17 P~~i~v~~G~~V~~--~n~~~~-~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~--tf~-~~G~y~y~C~ 84 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAGF-PHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSV--KLT-AAGEYGYYCE 84 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEE--ECC-SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----CCccccccccccceecCCCCEEEE--EeC-CCeEEEEEcC
Confidence 46899999998776 688742 23343332110 011110011235688999999988 455 4799988765
No 123
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=87.67 E-value=0.53 Score=34.75 Aligned_cols=64 Identities=20% Similarity=0.342 Sum_probs=40.0
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCc-c--CceEecEEEeCCCCEEEEEEEeCCCCCceeEEe
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVY-T--KPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 104 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~-v--~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~ 104 (377)
+..|++++|++++|+ |.+.. .|++.+.+ ++.+ . .....+.+.+.+||.+++ +++ .+|.|+...
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~-~~~pg~~~~~~~~~~~~~~pG~~~~~--tf~-~~G~y~~~C 83 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKLS--------PHNIVFDA-DGVPADTAAKLSHKGLLFAAGESFTS--TFT-EPGTYTYYC 83 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--------CEEEEECC-SSSCHHHHHHHCEEEEECSTTCEEEE--ECC-SCEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CcEEEEeC-CCCCccccccccccccccCCCCEEEE--EcC-CCeEEEEEc
Confidence 468999999988776 76532 24443321 1111 0 001135788999999987 455 479998876
Q ss_pred e
Q 017112 105 R 105 (377)
Q Consensus 105 ~ 105 (377)
.
T Consensus 84 ~ 84 (98)
T 1pcs_A 84 E 84 (98)
T ss_dssp G
T ss_pred C
Confidence 5
No 124
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=86.52 E-value=0.88 Score=33.61 Aligned_cols=65 Identities=22% Similarity=0.234 Sum_probs=38.9
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEe---CCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEe
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEV---DAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAA 104 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~---DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~ 104 (377)
+..|+|++|++++| +|.+.. .|.+.+.+. +|........+.+.+.+||.+++- ++ .+|.|+...
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~--------~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~t--f~-~~G~y~y~C 83 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGF--------PHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRK--LS-TPGVYGVYC 83 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSC--------CEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEE--CC-SCEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCCC--------CEEEEEeCCCCccccccccccccccccCCCCEEEEE--cC-CCEEEEEEc
Confidence 56899999998766 477641 333332210 111111112345789999999884 44 479998865
Q ss_pred e
Q 017112 105 R 105 (377)
Q Consensus 105 ~ 105 (377)
.
T Consensus 84 ~ 84 (98)
T 1iuz_A 84 E 84 (98)
T ss_dssp T
T ss_pred h
Confidence 4
No 125
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=84.14 E-value=3 Score=37.71 Aligned_cols=76 Identities=12% Similarity=0.157 Sum_probs=55.7
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.+.++.|+.|++.+.+. +..|.|.+-....++ | +-||....+.|.++
T Consensus 189 N~lvlP~g~~V~~~ltS~----DViHsf~iP~lg~k~-------------------------d---aiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT----DVIHAWTIPAFAVKQ-------------------------D---AVPGRIAQLWFSVD 236 (298)
T ss_dssp SCEEEESSSEEEEEEEES----SSCEEEEEGGGTEEE-------------------------E---ECTTCCEEEEEECS
T ss_pred ceEEEEcCCEEEEEEEeC----CccceeeEcccCceE-------------------------E---ecCCceEEEEEEeC
Confidence 468899999999999985 456877775443322 2 34577788999999
Q ss_pred CceeeEeeech-HHHHhccceeEEEEeCC
Q 017112 333 NPGVWFMHCHL-ELHTGWGLKTAFAVEDG 360 (377)
Q Consensus 333 ~pG~w~~HCHi-~~H~~~Gm~~~~~v~~~ 360 (377)
.||.|...|.- .-.-...|-..+++.+.
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 99999999994 33344667777777643
No 126
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=82.92 E-value=1.9 Score=32.31 Aligned_cols=63 Identities=17% Similarity=0.175 Sum_probs=38.5
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEeec
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARP 106 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~~ 106 (377)
++.|+|++|++++| .|.+.. ...+.+.+- .||. .... +-.|.+|+.+++-+ + .+|.|+.....
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~~-~H~v~~~~~------~~g~--~~~~--~~~~~pG~~~~~tf--~-~~G~y~y~C~~ 94 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREAM-PHNVHFVAG------VLGE--AALK--GPMMKKEQAYSLTF--T-EAGTYDYHCTP 94 (105)
T ss_dssp SSEEEECTTCEEEE--EECSSS-CBCCEECTT------TSSS--SCEE--CCCBCTTEEEEEEE--C-SCEEEEEECSS
T ss_pred CCEEEECCCCEEEE--EECCCC-CEEEEEcCC------CCCc--cccc--ccccCCCCEEEEEe--C-CCEEEEEEeCC
Confidence 57899999998766 588752 222333221 1332 1122 22478999988654 4 47999987543
No 127
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=80.79 E-value=0.93 Score=33.41 Aligned_cols=65 Identities=23% Similarity=0.264 Sum_probs=39.4
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEe---CCCccC--ceEecEEEeCCCCEEEEEEEeCCCCCceeE
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEV---DAVYTK--PFTTEAILIAPGQTTNVLVQANQKPGRYFM 102 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~---DG~~v~--P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l 102 (377)
+..|+|++|++++| .|.+.. .|++.+.+. ||.... ....+.+.|.+||.+++-+ + .+|.|+.
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~--------~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~-~~G~y~~ 82 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF--------PHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL--T-EKGTYKF 82 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC--------CBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE--C-SCEEEEE
T ss_pred CCEEEECCCCEEEE--EECCCC--------cceEEEeCCCCccccccccccccccceeeCCCCEEEEEe--C-CCcEEEE
Confidence 45899999998766 687742 344433221 221110 0112446789999998844 4 4799988
Q ss_pred Eee
Q 017112 103 AAR 105 (377)
Q Consensus 103 ~~~ 105 (377)
...
T Consensus 83 ~C~ 85 (99)
T 1byp_A 83 YCA 85 (99)
T ss_dssp ECG
T ss_pred EcC
Confidence 765
No 128
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=80.09 E-value=0.89 Score=33.56 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=39.2
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccC--ceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTK--PFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~--P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..++|++|++++| .|.+.. ...+.+.+..+ -||.... ....+.+.+.+||.+++ +++ .+|.|+....
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~-~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~--tf~-~~G~y~~~C~ 85 (99)
T 1plc_A 16 PSEFSISPGEKIVF--KNNAGF-PHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEV--ALS-NKGEYSFYCS 85 (99)
T ss_dssp SSEEEECTTCEEEE--EECSSC-CBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEE--ECC-SCEEEEEECG
T ss_pred CCEEEECCCCEEEE--EECCCC-ceEEEEeCCCC----cccccccccccccCccccCCCCEEEE--EEC-CCceEEEEcC
Confidence 56899999998766 687742 22233322110 0121100 01123467899999988 444 4799988765
No 129
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=79.04 E-value=5 Score=34.06 Aligned_cols=74 Identities=15% Similarity=0.140 Sum_probs=53.2
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.+.++.|+.|++.|.+. +..|.|.+-....++ .+-||....+.|.++
T Consensus 41 n~l~lP~g~~V~~~lTS~----DViHSF~IP~lgvK~----------------------------daiPGr~n~l~~~~~ 88 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN----SVMHSFFIPRLGSQI----------------------------YAMAGMQTRLHLIAN 88 (205)
T ss_dssp SEEEEETTSCEEEEEEES----SSCEEEEEGGGTEEE----------------------------EECTTCCEEEEECCS
T ss_pred ceEEEeCCCEEEEEEecC----CceeeEEecccCcEE----------------------------EecCCceEEEEEEeC
Confidence 468899999999999986 456777665433222 234577788899999
Q ss_pred CceeeEeeechHHHH-hccceeEEEEe
Q 017112 333 NPGVWFMHCHLELHT-GWGLKTAFAVE 358 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~-~~Gm~~~~~v~ 358 (377)
.||.|...|.-.-.. ...|...++|.
T Consensus 89 ~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 89 EPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CCeEEEEEcccccccchhhceEEEEEE
Confidence 999999999854333 34566777765
No 130
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=78.12 E-value=5.1 Score=30.64 Aligned_cols=47 Identities=23% Similarity=0.421 Sum_probs=32.9
Q ss_pred CEEEEEEEecCCC-CeEEEEEcCc-eEEEEEeCCCccCceEecEEEeCCCCEEEEEEEe
Q 017112 37 KTYLLRIINAALN-DELFFAIAGH-NFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQA 93 (377)
Q Consensus 37 ~~yRlRlINa~~~-~~~~~~idgh-~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~ 93 (377)
-.|+|||+|.+.. ..|.|+++|. .+.++ | +. .+.+.+||..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE---S----CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe---C----CC---cEEECCCCEEEEEEEE
Confidence 4699999999865 4577888774 23333 2 21 3999999987776654
No 131
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=77.66 E-value=6.9 Score=34.66 Aligned_cols=75 Identities=15% Similarity=0.248 Sum_probs=53.6
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.+.++.|+.|++.+.+. +..|.|.+-....++ | +-||....+.|.++
T Consensus 171 n~l~lP~g~~v~~~~tS~----DViHsf~ip~l~~k~-------------------------d---a~PG~~n~~~~~~~ 218 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA----DVIHSWTVPAFGVKQ-------------------------D---AVPGRLAQLWFRAE 218 (262)
T ss_dssp SCEEEETTSEEEEEEEES----SSCEEEEEGGGTEEE-------------------------E---ECBTCCEEEEEECC
T ss_pred ceEEEecCCEEEEEEEEC----cccceeeecccCceE-------------------------E---ecCCceeEEEEecC
Confidence 458899999999999985 456777775443322 3 33577778899999
Q ss_pred CceeeEeeechHHH-HhccceeEEEEeC
Q 017112 333 NPGVWFMHCHLELH-TGWGLKTAFAVED 359 (377)
Q Consensus 333 ~pG~w~~HCHi~~H-~~~Gm~~~~~v~~ 359 (377)
.||.+...|.-.-- -...|-..++|.+
T Consensus 219 ~~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 219 REGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CcEEEEEEChHhcccCcccCeEEEEEEc
Confidence 99999999984332 2345767776654
No 132
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=75.72 E-value=6.3 Score=30.40 Aligned_cols=72 Identities=13% Similarity=0.177 Sum_probs=49.2
Q ss_pred CCCEE--EEEEEecCCCCeEEEEEc-Cce--EEEEEeCCCccC--------ceEecEEEeCCCCEEEEEEEeCC--CCCc
Q 017112 35 SGKTY--LLRIINAALNDELFFAIA-GHN--FTVVEVDAVYTK--------PFTTEAILIAPGQTTNVLVQANQ--KPGR 99 (377)
Q Consensus 35 pG~~y--RlRlINa~~~~~~~~~id-gh~--~~VIa~DG~~v~--------P~~v~~l~l~~GqR~dvlv~~~~--~~g~ 99 (377)
.|+.+ .|-+.|.+.. ...|.+. |+. |.|...+|..|- ++......|.|||...+-...++ .+|.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 55444 4778888874 4456663 454 445444576551 33456899999999999999884 5799
Q ss_pred eeEEeecc
Q 017112 100 YFMAARPF 107 (377)
Q Consensus 100 y~l~~~~~ 107 (377)
|.+.+...
T Consensus 95 Ytl~a~l~ 102 (120)
T 3isy_A 95 YEVKVTFK 102 (120)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 99987643
No 133
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=74.77 E-value=30 Score=34.22 Aligned_cols=62 Identities=21% Similarity=0.310 Sum_probs=47.2
Q ss_pred eeEEEEeCCCEEEEEEEecCC--CCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAAL--NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~--~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..|+|+.|+++||.+-|... .-...|.|+++.+. +.+.||+...+-+++++ +|.|+....
T Consensus 557 P~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk-PGvY~y~CS 619 (638)
T 3sbq_A 557 VQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADK-PGLHWYYCS 619 (638)
T ss_dssp CCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS-CEEEEEECC
T ss_pred CCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC-CEEEEEECC
Confidence 458899999999999999742 34556666665432 36889999999999986 799999766
Q ss_pred c
Q 017112 106 P 106 (377)
Q Consensus 106 ~ 106 (377)
.
T Consensus 620 E 620 (638)
T 3sbq_A 620 W 620 (638)
T ss_dssp S
T ss_pred C
Confidence 4
No 134
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=74.41 E-value=11 Score=29.62 Aligned_cols=59 Identities=22% Similarity=0.452 Sum_probs=41.8
Q ss_pred EEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEeecc
Q 017112 30 AMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 107 (377)
Q Consensus 30 ~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~~~ 107 (377)
.+.|+.|+++||++-|.. ....|.|.+..+ .+.+.||+.-.+-+++++ +|.|......+
T Consensus 61 ~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~-~G~y~~~C~e~ 119 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQY 119 (135)
T ss_dssp SEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECCS-CEEEEEECCSC
T ss_pred EEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcCC-CEEEEEECccc
Confidence 688999999999888764 244455544332 245678988888888875 79999876543
No 135
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=73.18 E-value=6.4 Score=30.76 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=37.5
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCC-ccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV-YTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~-~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..++|++|++++|+ |.... .|++... ++. .... .+.-.|.+||.+++-+ + .+|.|+..-.
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~--------~H~v~~~--~~~~g~~~--~~s~~l~pG~t~~~tF--~-~~G~y~y~C~ 120 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVM--------PHNVAFK--KGIVGEDA--FRGEMMTKDQAYAITF--N-EAGSYDYFCT 120 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--------CBCCEEC--TTTSSSSC--EECCCBCTTEEEEEEE--C-SCEEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCC--------ceEEEEe--CCCCCccc--ccccccCCCCEEEEEc--C-CCEEEEEEeC
Confidence 568999999988765 87642 2433322 111 0111 2334578999998655 4 4799988754
No 136
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=68.36 E-value=7.7 Score=28.88 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=37.1
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCC-ccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAV-YTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~-~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..++|++|++++|+ |.+.. .|.+... ++. .-.. .++-.|.+|+.+++-+ + .+|.|+....
T Consensus 33 P~~i~V~~G~tV~~~--N~d~~--------~H~v~~~--~~~~~~~~--~~s~~l~~g~~~~~tf--~-~~G~y~~~C~ 94 (106)
T 1id2_A 33 TPEVTIKAGETVYWV--NGEVM--------PHNVAFK--KGIVGEDA--FRGEMMTKDQAYAITF--N-EAGSYDYFCT 94 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--------CBCCEEC--TTTSSSSC--EECCCBCTTEEEEEEE--C-SCEEEEEECS
T ss_pred CCEEEECCCCEEEEE--ECCCC--------cEEEEEe--CCCCCccc--ccccccCCCCEEEEEe--C-CCEEEEEEeC
Confidence 568999999988765 87752 2333221 121 0111 2233578999998755 4 4799988654
No 137
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=66.57 E-value=2.5 Score=32.84 Aligned_cols=62 Identities=18% Similarity=0.258 Sum_probs=39.0
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEeecc
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 107 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~~~ 107 (377)
+..|+|++|.+++|.+-|. +|.++.. ++ ..|-....+.+.+|+.+++-+ + .+|.|+......
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~--~~--~~P~g~~~f~~~pg~t~s~TF--~-~pG~y~y~C~~H 81 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK-----------SHNVEAI--KE--ILPEGVESFKSKINESYTLTV--T-EPGLYGVKCTPH 81 (123)
T ss_dssp SSEEEECTTEEEEEEESST-----------TCCCEEC--TT--SSCTTCCCCBCCTTCCEEEEE--C-SCEEEEEECGGG
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--CC--cCCCCccceecCCCCEEEEEe--C-CCeEEEEEeCCC
Confidence 4589999999888776652 3555432 12 112222334467899887766 4 479999876643
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=63.61 E-value=29 Score=28.35 Aligned_cols=59 Identities=22% Similarity=0.452 Sum_probs=41.2
Q ss_pred EEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEeecc
Q 017112 30 AMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAARPF 107 (377)
Q Consensus 30 ~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~~~ 107 (377)
.+.++.|+.+||++-|.. -...|.|++..+ .+.+-||+.-.+-+++++ +|.|+.+...+
T Consensus 94 ~l~VP~G~~Vr~~vTS~D--ViHsf~IP~lgi----------------k~da~PG~~n~~~~~~~k-pG~y~g~Cse~ 152 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR-PGEYRIICNQY 152 (168)
T ss_dssp SEEEETTSEEEEEEECSS--SCEEEEETTSSC----------------EEEECTTBCEEEEEECCS-CEEEEEECCSC
T ss_pred EEEEeCCCeEEEEEecCC--ceEEEEECCCCe----------------EEEecCCceeEEEEEeCC-CEEEEEECCcC
Confidence 577888888888887753 344555554432 345678988888888876 79999986643
No 139
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=62.85 E-value=15 Score=31.62 Aligned_cols=76 Identities=9% Similarity=0.188 Sum_probs=53.2
Q ss_pred eeeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEc
Q 017112 252 TRLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRA 331 (377)
Q Consensus 252 ~~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~ 331 (377)
.+.+.++.|+.|++.+.+. +..|.|.+-....+ .| .-||..-.+.|.+
T Consensus 139 dn~lvlP~~~~Vr~~vtS~----DViHsf~vP~lg~K-------------------------~D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSE----DVLHSWAVPSLGLK-------------------------TD---AIPGRLNQTTLMS 186 (227)
T ss_dssp SSCEEEETTSCEEEEEEES----SSCEEEEEGGGTEE-------------------------EE---ECTTCCEEEEECC
T ss_pred CceEEEecCCEEEEEEEeC----cccceeeecccCcE-------------------------EE---ecCCceEEEEEec
Confidence 3468899999999999985 45687777544332 23 3346777888999
Q ss_pred CCceeeEeeechHHHH-hccceeEEEEeC
Q 017112 332 DNPGVWFMHCHLELHT-GWGLKTAFAVED 359 (377)
Q Consensus 332 d~pG~w~~HCHi~~H~-~~Gm~~~~~v~~ 359 (377)
+.||.+...|.-.--. ..-|-..+++.+
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEehhhcccccccCeEEEEEEc
Confidence 9999999999843322 245666666654
No 140
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=61.21 E-value=13 Score=33.84 Aligned_cols=74 Identities=12% Similarity=0.054 Sum_probs=52.2
Q ss_pred eeeeeccCceEEEEEeecCCCCCCCCCeeecCCceEEEEecCCCCCCCCCCCCCCCCCCCccceeeeCCCCEEEEEEEcC
Q 017112 253 RLSKIAFNSTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKYPANYNLVDPIERNTAAVPTGGWTAIRFRAD 332 (377)
Q Consensus 253 ~~~~~~~g~~v~~~l~n~~~~~~~~Hp~HlHg~~f~vl~~g~g~~~~~~~~~~~~~~np~~rDtv~v~~~~~~~i~~~~d 332 (377)
+.+.++.|+.|++.+.+. +..|.|.+-....++ | .-||....+.|.++
T Consensus 151 n~l~lP~g~~V~~~lTS~----DViHsf~IP~lg~k~-------------------------D---aiPGr~n~~~~~~~ 198 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN----SVMNSFFIPRLGSQI-------------------------Y---AMAGMQTRLHLIAN 198 (315)
T ss_dssp SBCCCCSSSEEEEEECBS----SSCEEEEEGGGTEEE-------------------------E---ECBTSCEEEEEECC
T ss_pred ceEEEeCCCEEEEEEEeC----CccceeeecccCcEE-------------------------e---ecCCcceeeEEecC
Confidence 457889999999999985 456777775443322 3 33477788899999
Q ss_pred CceeeEeeechHHHH-hccceeEEEEe
Q 017112 333 NPGVWFMHCHLELHT-GWGLKTAFAVE 358 (377)
Q Consensus 333 ~pG~w~~HCHi~~H~-~~Gm~~~~~v~ 358 (377)
.||.|...|.-.--. ...|-..++|.
T Consensus 199 ~~G~y~g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 199 EPGTYDGISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp SCBCCEEBCCSCCSTTTTTCCEECCBC
T ss_pred CCeEEEEeccccchhhHHhccceEEEe
Confidence 999999999843322 34566666655
No 141
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=54.89 E-value=5.5 Score=30.79 Aligned_cols=60 Identities=18% Similarity=0.300 Sum_probs=35.1
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..|+|++|.+++|. |.+. +|.+...+ |- .|-....+.+.+||.+++ +++ .+|.|+....
T Consensus 20 P~~i~V~~GdtV~f~--~~~~---------~H~v~~~~-~~---~p~~~~~~~~~pG~t~~~--tF~-~~G~y~y~C~ 79 (123)
T 1paz_A 20 PAYIKANPGDTVTFI--PVDK---------GHNVESIK-DM---IPEGAEKFKSKINENYVL--TVT-QPGAYLVKCT 79 (123)
T ss_dssp SSEEEECTTCEEEEE--ESSS---------SCCCEECT-TC---SCTTCCCCBCCTTCCEEE--ECC-SCEEEEEECT
T ss_pred CCEEEECCCCEEEEE--ECCC---------CeEEEEec-cc---CCCCccceecCCCCEEEE--EeC-CCEEEEEEeC
Confidence 468999999988764 4442 36654421 10 011111233468998765 454 4799988764
No 142
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=47.91 E-value=4.5 Score=31.56 Aligned_cols=60 Identities=20% Similarity=0.285 Sum_probs=36.6
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCCCCCceeEEee
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQKPGRYFMAAR 105 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~~~g~y~l~~~ 105 (377)
+..|+|++|.+++|.+-|. +|.++.. |+. -|-....+.+.+||.+++-+ + .+|.|+....
T Consensus 22 P~~i~V~~GDtVtf~n~~~-----------~H~v~~~--~~~--~P~g~~~f~s~pGet~s~TF--~-~pG~y~y~C~ 81 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK-----------GHNSALM--KGG--APEGAETWKGKINEEITVTL--S-KPGVYMYQCA 81 (127)
T ss_dssp SSEEEECTTCEEEEECSSS-----------SCCCEEC--TTC--SCTTCCCCBCCTTCCCEEEC--C-SCEEEEEECT
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--cCc--CCCCccceecCCCCEEEEEe--C-CCeEEEEEeC
Confidence 4689999999877765442 3555432 221 12111234457899877655 4 4799998765
No 143
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=45.53 E-value=22 Score=28.01 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=29.5
Q ss_pred EEEc-CCceeeEeeechHHHHhccceeEEEEeCCCC
Q 017112 328 RFRA-DNPGVWFMHCHLELHTGWGLKTAFAVEDGPG 362 (377)
Q Consensus 328 ~~~~-d~pG~w~~HCHi~~H~~~Gm~~~~~v~~~~~ 362 (377)
.|.. +.+|.+-|-|=+..|=..||...|.|.....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~ 111 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANA 111 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC-
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCCC
Confidence 3556 8899999999999999999999999976543
No 144
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=40.06 E-value=57 Score=27.74 Aligned_cols=64 Identities=16% Similarity=0.088 Sum_probs=31.8
Q ss_pred eeEEEEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCce-EecEEEeCCCCEEEEEEEeCC
Q 017112 28 TFAMEVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPF-TTEAILIAPGQTTNVLVQANQ 95 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~-~v~~l~l~~GqR~dvlv~~~~ 95 (377)
+|.++++||+...|||+..+..- --|.-.+.-+-++..|=++. ....|.|+.-.|.=++++...
T Consensus 65 PPl~Rl~p~~~q~lRI~~~~~~L----P~DRESlf~lnv~eIPp~~~~~~n~lqia~r~rIKlFyRP~~ 129 (218)
T 4ay0_A 65 PPLFRLDAKQQNSLRIAQAGGVF----PRDKESLKWLCVKGIPPKDEDIWVDVQFAINNCIKLLVRPNE 129 (218)
T ss_dssp SSEEEECTTCEEEEEEEECSCCC----CSSSCEEEEEEEEEECC--------------CEEEEEEECTT
T ss_pred CCeEEeCCCCceEEEEEecCCCC----CcCcEEEEEEEEEecCCCCccccceeEEEEEEEEEEEEcCcc
Confidence 67899999999999999987531 11222222222223232111 224578888888888887653
No 145
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=37.25 E-value=12 Score=29.21 Aligned_cols=24 Identities=21% Similarity=0.178 Sum_probs=18.8
Q ss_pred eEEEEeCCCEEEEEEEecCCCCeE
Q 017112 29 FAMEVESGKTYLLRIINAALNDEL 52 (377)
Q Consensus 29 ~~i~v~pG~~yRlRlINa~~~~~~ 52 (377)
-.|.|++||++||.+.|-+-...|
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEEE
Confidence 358999999999999888755444
No 146
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=34.46 E-value=45 Score=29.22 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=34.4
Q ss_pred eeEEEEeCCCEEEEEEEecCCC------CeEEEEEcCceEEEEEeCCCccCce-EecEEEeCCCCEEEEEEEeCC
Q 017112 28 TFAMEVESGKTYLLRIINAALN------DELFFAIAGHNFTVVEVDAVYTKPF-TTEAILIAPGQTTNVLVQANQ 95 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~~------~~~~~~idgh~~~VIa~DG~~v~P~-~v~~l~l~~GqR~dvlv~~~~ 95 (377)
+|.++++||++..+||+..+.. ..|+|.|.+ .|-++. ....|.|+.-.|+=+.++...
T Consensus 84 PPl~rl~pg~~q~lRI~~~~~~LP~DrESlf~lnv~e----------IPp~~~~~~n~Lqiair~rIKLFyRP~~ 148 (257)
T 3q48_A 84 PAVTRVEPNGGAVLRIAYLKAPLPTDRESLFWLNILE----------VPPRDEDENNALQFSFRSRFKLFFRPSQ 148 (257)
T ss_dssp SSEEEECTTEEEEEEEEECCCCCCSSSCEEEEEEEEE----------ECCC---------CCEEEEEEEEEECTT
T ss_pred CCEEEECCCCceEEEEEECCCCCCCCceeEEEEEeee----------cCCCCCCCCceEEEEEEEEEEEEEeccc
Confidence 5788999999999999988751 234444433 222111 135677777778877777653
No 147
>1gui_A Laminarinase 16A; carbohydrate binding module, CBM, glucan, cellulose; HET: BGC; 1.9A {Thermotoga maritima} SCOP: b.18.1.14
Probab=34.29 E-value=1.6e+02 Score=22.90 Aligned_cols=9 Identities=11% Similarity=0.246 Sum_probs=4.3
Q ss_pred EEEEEEecC
Q 017112 39 YLLRIINAA 47 (377)
Q Consensus 39 yRlRlINa~ 47 (377)
.++.+-+++
T Consensus 47 ~~i~v~~~g 55 (155)
T 1gui_A 47 AYITIADPG 55 (155)
T ss_dssp EEEEEEECC
T ss_pred EEEEECCCC
Confidence 444444444
No 148
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=32.30 E-value=36 Score=25.88 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=28.4
Q ss_pred EEEcCCceeeEeeechHHHHhccceeEE-EEeCC
Q 017112 328 RFRADNPGVWFMHCHLELHTGWGLKTAF-AVEDG 360 (377)
Q Consensus 328 ~~~~d~pG~w~~HCHi~~H~~~Gm~~~~-~v~~~ 360 (377)
.|..+.+|..-|-|=...|=..||...| .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4667889999999999999999999999 77654
No 149
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=31.44 E-value=38 Score=25.38 Aligned_cols=32 Identities=22% Similarity=0.502 Sum_probs=28.4
Q ss_pred EEEcCCceeeEeeechHHHHhccceeEEEEeC
Q 017112 328 RFRADNPGVWFMHCHLELHTGWGLKTAFAVED 359 (377)
Q Consensus 328 ~~~~d~pG~w~~HCHi~~H~~~Gm~~~~~v~~ 359 (377)
.|..+.+|..-|-|=...|=..||...+.|..
T Consensus 73 ~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~~ 104 (109)
T 1ws8_A 73 SIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 104 (109)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEECC
T ss_pred EEEECCCcCEEEECCCCCcccCCCEEEEEEcC
Confidence 46678999999999999999999999998864
No 150
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=30.71 E-value=69 Score=27.19 Aligned_cols=57 Identities=11% Similarity=0.202 Sum_probs=35.7
Q ss_pred eeEEEEeCCCEEEEEEEecCC--------CCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeC
Q 017112 28 TFAMEVESGKTYLLRIINAAL--------NDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQAN 94 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~--------~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~ 94 (377)
+|.++++||++..|||+..+. ...|+|.+.+-+ -++.....|.|+.-.|.=+.++..
T Consensus 54 PPl~rl~p~~~q~lRI~~~~~~~~lP~DrESlf~lnv~eIP----------p~~~~~n~lqia~r~rIKlFyRP~ 118 (218)
T 2xg5_A 54 PPVQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIP----------PRSEKANVLQIALQTKIKLFYRPA 118 (218)
T ss_dssp CSEEEECTTCEEEEEEEECGGGGGSCSSSCEEEEEEEEEEC----------CCCCCTTEEEEEEEEEEEEEEECG
T ss_pred CCeEEECCCCceEEEEEecCCCCCCCCCceEEEEEEeecCC----------CCCCCCceEEEEehheeeEEEcCc
Confidence 578999999999999998872 124555543332 111112466666666666666654
No 151
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=30.10 E-value=67 Score=26.37 Aligned_cols=72 Identities=8% Similarity=0.079 Sum_probs=40.0
Q ss_pred EEeCCCEEEEEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEe----cEE--E-eCCCCEEEEEEEeCC--CCCceeE
Q 017112 32 EVESGKTYLLRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTT----EAI--L-IAPGQTTNVLVQANQ--KPGRYFM 102 (377)
Q Consensus 32 ~v~pG~~yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v----~~l--~-l~~GqR~dvlv~~~~--~~g~y~l 102 (377)
.+..|+.++||+-=-.....-.+.+ -|.|-..+|..+--..+ ..+ . +.+|+.+.+-++++- .+|+|.|
T Consensus 65 ~~~~Ge~v~l~i~~~~~~~i~~~v~---G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~f~l~L~~G~Y~l 141 (188)
T 2r5o_A 65 SLTGNQQTDFLMKVVFEYDFDCVVP---GILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKFSLPVDLNSGDYLL 141 (188)
T ss_dssp SEETTCEEEEEEEEEESSCEEEEEE---EEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEEEEECCBCSEEEEE
T ss_pred EEeCCCEEEEEEEEEECCcCCccEE---EEEEECCCCCEEEecCcccccccccccccCCCCEEEEEEEEecccCCCeEEE
Confidence 3677777776655443332222222 35666667776621111 112 3 578997665555442 5799999
Q ss_pred Eeec
Q 017112 103 AARP 106 (377)
Q Consensus 103 ~~~~ 106 (377)
.+..
T Consensus 142 sv~i 145 (188)
T 2r5o_A 142 SFGI 145 (188)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 152
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=28.82 E-value=1.3e+02 Score=23.52 Aligned_cols=49 Identities=10% Similarity=0.004 Sum_probs=29.6
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCC----EEEEEEEecCCCCeEEEEE-cCceEEE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGK----TYLLRIINAALNDELFFAI-AGHNFTV 63 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~----~yRlRlINa~~~~~~~~~i-dgh~~~V 63 (377)
|..+.+||++.. -.-.-.++||+ .+|+++.|.-+...+.-.+ .++++.+
T Consensus 15 G~~i~~~g~p~~-------Vve~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ve~ 68 (138)
T 1iz6_A 15 GRYIIIDDEPCR-------IVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEVDV 68 (138)
T ss_dssp TSEEEETTEEEE-------EEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETTSEEEE
T ss_pred CCEEEECCEEEE-------EEEEEeecCCCCCceEEEEEEEECCCCCEEEEEecCCCEEee
Confidence 667788887410 01122467876 5899999987766665444 2445444
No 153
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=27.71 E-value=1.3e+02 Score=25.50 Aligned_cols=20 Identities=20% Similarity=0.321 Sum_probs=18.3
Q ss_pred eeEEEEeCCCEEEEEEEecC
Q 017112 28 TFAMEVESGKTYLLRIINAA 47 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~ 47 (377)
+|.++++||+...|||+..+
T Consensus 63 PPl~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 63 PPLFRLEANQQSQLRIVRTG 82 (221)
T ss_dssp SSEEEECTTCEEEEEEEECC
T ss_pred CCEEEECCCCceEEEEEECC
Confidence 57899999999999999887
No 154
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=26.98 E-value=75 Score=27.42 Aligned_cols=21 Identities=14% Similarity=0.203 Sum_probs=18.6
Q ss_pred eeEEEEeCCCEEEEEEEecCC
Q 017112 28 TFAMEVESGKTYLLRIINAAL 48 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~ 48 (377)
+|.++++||+...|||+..+.
T Consensus 73 PPlfRlep~~~q~lRIi~~~~ 93 (239)
T 4djm_A 73 PPLFRLDGQQSSRLRIVRTGG 93 (239)
T ss_dssp SSEEEECTTEEEEEEEEECSC
T ss_pred CCeEEECCCCceEEEEEECCC
Confidence 578899999999999998775
No 155
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=26.66 E-value=1.4e+02 Score=25.40 Aligned_cols=31 Identities=6% Similarity=-0.064 Sum_probs=23.1
Q ss_pred EEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc
Q 017112 39 YLLRIINAALNDELFFAIAGHNFTVVEVDAVYT 71 (377)
Q Consensus 39 yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v 71 (377)
-++++.|+|..+.|.++ +..+..+..|+.++
T Consensus 108 ~~l~~~~aG~~~~~l~r--~g~~~~l~~~~~~l 138 (242)
T 3pu9_A 108 RSVLVTRNSEVPMLLGR--NGEFEQISESGGRI 138 (242)
T ss_dssp TEEEEEEESCCCEEEEE--TTEEEEECCCCCCB
T ss_pred CEEEEEeCCCCcEEEEE--CCEEEEeCCCCccc
Confidence 36889999987777554 45677777887766
No 156
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=26.06 E-value=43 Score=28.71 Aligned_cols=21 Identities=29% Similarity=0.210 Sum_probs=18.5
Q ss_pred eeEEEEeCCCEEEEEEEecCC
Q 017112 28 TFAMEVESGKTYLLRIINAAL 48 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~~ 48 (377)
+|.++++||+...|||+..+.
T Consensus 53 PPlfRlep~~~q~lRIi~~~~ 73 (224)
T 3gfu_C 53 PSFFKVKPNGQQTLRIIMASD 73 (224)
T ss_dssp SSEEEECTTCEEEEEEEECSC
T ss_pred CCeEEECCCCceEEEEEECCC
Confidence 578899999999999998774
No 157
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=25.71 E-value=1.1e+02 Score=25.88 Aligned_cols=46 Identities=7% Similarity=0.089 Sum_probs=28.1
Q ss_pred EEEEEEecCCCCeEEEEEcCceEEEEEeCCCcc---C--ceEecEEEeCCCCE
Q 017112 39 YLLRIINAALNDELFFAIAGHNFTVVEVDAVYT---K--PFTTEAILIAPGQT 86 (377)
Q Consensus 39 yRlRlINa~~~~~~~~~idgh~~~VIa~DG~~v---~--P~~v~~l~l~~GqR 86 (377)
-+++++|+|..+.|.++ +..+..+..++.++ + .+....+.|.+|.|
T Consensus 105 ~~l~~~~aG~~~~~l~r--~g~~~~l~~~~~~lG~~~~~~~~~~~~~l~~GD~ 155 (242)
T 3t91_A 105 ASCKFLKVGSTPSFIKR--GDQVMKVQASNLPIGIINEFDVEVVSEQLKAGDL 155 (242)
T ss_dssp CEEEEEEESCCCEEEEE--TTEEEECCCC-----CCCTTCEEEEEEECCTTCE
T ss_pred CEEEEEcCCCCceEEEE--CCEEEEecCCCceeEecCCCcceEEEEEeCCCCE
Confidence 37999999998887655 44677777776555 1 23445566666655
No 158
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=25.56 E-value=1.8e+02 Score=22.88 Aligned_cols=27 Identities=22% Similarity=0.367 Sum_probs=17.6
Q ss_pred EEEEeCCCEEEEEEEec-CCCCeEEEEE
Q 017112 30 AMEVESGKTYLLRIINA-ALNDELFFAI 56 (377)
Q Consensus 30 ~i~v~pG~~yRlRlINa-~~~~~~~~~i 56 (377)
-|.+++|++|+|+|-=- +..+.+.+.|
T Consensus 51 gi~L~~G~tY~lsF~A~as~~r~i~v~i 78 (149)
T 1gu3_A 51 GVAIEEGTTYTLRYTATASTDVTVRALV 78 (149)
T ss_dssp EECBCTTCEEEEEEEEEESSCEECEEEE
T ss_pred CEEEcCCCEEEEEEEEEeCCCcEEEEEE
Confidence 47788888898887533 3445555544
No 159
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=25.24 E-value=2.3e+02 Score=21.64 Aligned_cols=69 Identities=12% Similarity=0.057 Sum_probs=45.1
Q ss_pred EEeCCCEEE--EEEEecCCCCeEEEEEcCceEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCC-CCCceeEEeeccC
Q 017112 32 EVESGKTYL--LRIINAALNDELFFAIAGHNFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ-KPGRYFMAARPFN 108 (377)
Q Consensus 32 ~v~pG~~yR--lRlINa~~~~~~~~~idgh~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~-~~g~y~l~~~~~~ 108 (377)
.+++|+.+. ..+-|.|....-.+.+ ++++ ||..+.- ..+.|++|+.-.|-+.... .+|+|.|.+....
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V---~lyv---ng~~v~t---~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV---RVYI---NGTLYKN---WTVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE---EEEE---TTEEEEE---EEEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE---EEEE---CCEEEee---EEeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 567787764 5688988776544433 2222 6665532 2446999999888887643 4689999887544
Q ss_pred C
Q 017112 109 D 109 (377)
Q Consensus 109 ~ 109 (377)
.
T Consensus 99 ~ 99 (127)
T 3idu_A 99 E 99 (127)
T ss_dssp T
T ss_pred C
Confidence 3
No 160
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum}
Probab=25.01 E-value=2.6e+02 Score=23.21 Aligned_cols=17 Identities=18% Similarity=0.173 Sum_probs=8.6
Q ss_pred EEEeCC--CCEEEEEEEeC
Q 017112 78 AILIAP--GQTTNVLVQAN 94 (377)
Q Consensus 78 ~l~l~~--GqR~dvlv~~~ 94 (377)
.+.|.. -|+|++-+++.
T Consensus 141 ~i~ltt~e~q~yt~~FT~~ 159 (205)
T 3p6b_A 141 PFNLTPGQKLTVEQNFTMN 159 (205)
T ss_dssp CEEEBTTEEEEEEEEEECC
T ss_pred eEEecCCCCEEEEEEEEeC
Confidence 455543 34555555553
No 161
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=24.75 E-value=64 Score=27.10 Aligned_cols=20 Identities=25% Similarity=0.278 Sum_probs=17.4
Q ss_pred eeEEEEeCCCEEEEEEE-ecC
Q 017112 28 TFAMEVESGKTYLLRII-NAA 47 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlI-Na~ 47 (377)
+|.++++||+...|||+ ..+
T Consensus 52 PPl~rl~p~~~q~lRI~~~~~ 72 (206)
T 1l4i_A 52 PPLFSMQGKKENTLRIIDATN 72 (206)
T ss_dssp SSEEEEESSEEEEEEEEECCT
T ss_pred CCeEEECCCCceEEEEEecCC
Confidence 57899999999999999 654
No 162
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=23.72 E-value=1.6e+02 Score=23.85 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=29.1
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCC----EEEEEEEecCCCCeEEEEE-cCceEE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGK----TYLLRIINAALNDELFFAI-AGHNFT 62 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~----~yRlRlINa~~~~~~~~~i-dgh~~~ 62 (377)
+..+.+||++.. -.-.-.++||+ .+|+++.|.-+...+.-.+ .++++.
T Consensus 39 G~~I~idG~p~~-------Vve~~~~KpGKHG~A~vr~k~knl~TG~k~E~tf~s~~kve 91 (167)
T 3er0_A 39 NGFVVIKSRPCK-------IVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNME 91 (167)
T ss_dssp TCEEEETTEEEE-------EEEEEEECCSSSSCCEEEEEEEESSSCCCEEEEEESSSEEE
T ss_pred CCEEEECCEEEE-------EEEEEEeCCCCcCceEEEEEEEEcCCCCEEEEEEcCCCccc
Confidence 566778887410 01122468998 5889999987776665555 234433
No 163
>2loj_A Putative cytoplasmic protein; pathogenic bacterial protein, PSI-biology, northeast structu genomics consortium (NESG); NMR {Salmonella enterica subsp}
Probab=23.23 E-value=83 Score=21.02 Aligned_cols=20 Identities=30% Similarity=0.389 Sum_probs=15.5
Q ss_pred eeEEEEeCCCEEEEEEEecC
Q 017112 28 TFAMEVESGKTYLLRIINAA 47 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~ 47 (377)
...+-.-.|+.||||+-.++
T Consensus 38 ~~v~I~H~G~~Y~LR~Tr~G 57 (63)
T 2loj_A 38 GKVIIDHNGQEYLLRKTQAG 57 (63)
T ss_dssp CEEEEEETTEEEEEEEETTT
T ss_pred CEEEEEeCCeEEEeEEccCC
Confidence 34666788999999987665
No 164
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=21.63 E-value=1.7e+02 Score=22.60 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=30.0
Q ss_pred CCeEEEcCCCCCCCCCCCCceeEEEEeCCC----EEEEEEEecCCCCeEEEEE-cCceEEE
Q 017112 8 SDAHTINGKPGPLFPCSEKHTFAMEVESGK----TYLLRIINAALNDELFFAI-AGHNFTV 63 (377)
Q Consensus 8 ~d~~liNG~~~~~~~~~~~~~~~i~v~pG~----~yRlRlINa~~~~~~~~~i-dgh~~~V 63 (377)
|..+.++|++.. -.-.-.++||+ .+|+++.|.-+...+.-.+ .++++.+
T Consensus 17 G~~i~~~g~p~~-------Vve~~~~KpGKgG~A~vr~k~knl~tG~~~e~tf~s~~kve~ 70 (136)
T 1bkb_A 17 GSYVVIDGEPCR-------VVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEV 70 (136)
T ss_dssp TCEEEETTEEEE-------EEEEEEECCSTTSCCEEEEEEEETTTCCEEEEEEETTSEEEE
T ss_pred CCEEEECCEEEE-------EEEEEEecCCCCCceEEEEEEEECCCCCeEEEEEcCCCEeee
Confidence 667788887410 01123477876 3799999987777665444 3455544
No 165
>2jra_A Protein RPA2121; domain-swapped dimer, structural genomics, PSI, protein STRU initiative, northeast structural genomics consortium; NMR {Rhodopseudomonas palustris}
Probab=21.17 E-value=87 Score=21.15 Aligned_cols=20 Identities=15% Similarity=0.205 Sum_probs=15.0
Q ss_pred eeEEEEeCCCEEEEEEEecC
Q 017112 28 TFAMEVESGKTYLLRIINAA 47 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlINa~ 47 (377)
....-.-.|+.||||+-.++
T Consensus 42 ~ev~I~H~G~~Y~LR~Tr~G 61 (67)
T 2jra_A 42 REIVIAHGDDRYRLRLTSQN 61 (67)
T ss_dssp SEEEEEETTEEEEEEECTTS
T ss_pred CEEEEEeCCeEEEeEEccCC
Confidence 34566778999999986654
No 166
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=21.03 E-value=70 Score=23.10 Aligned_cols=68 Identities=10% Similarity=0.118 Sum_probs=35.0
Q ss_pred EeCCCEEEEEEEecCCCCeEEEEEcCc--eEEEEEeCCCccCceEecEEEeCCCCEEEEEEEeCC--CCCceeEEeec
Q 017112 33 VESGKTYLLRIINAALNDELFFAIAGH--NFTVVEVDAVYTKPFTTEAILIAPGQTTNVLVQANQ--KPGRYFMAARP 106 (377)
Q Consensus 33 v~pG~~yRlRlINa~~~~~~~~~idgh--~~~VIa~DG~~v~P~~v~~l~l~~GqR~dvlv~~~~--~~g~y~l~~~~ 106 (377)
-+||+++++|++--.... . -..+- .++|..-+|..+.-. ........-++.-+.++. ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~--~-p~~~~~~~v~l~dp~g~~v~~~---~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENF--H-PLNELIPLVYIQDPKGNRIAQW---QSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGG--C-BCCCEEEEEEEECTTSCEEEEE---EEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCC--c-CCCCCceEEEEECCCCCEEEEE---EeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 589999999977543211 0 01111 344554455533211 112223345555555544 35889888764
No 167
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=21.00 E-value=1.4e+02 Score=25.01 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=17.9
Q ss_pred eeEEEEeCCCEEEEEEEe-cC
Q 017112 28 TFAMEVESGKTYLLRIIN-AA 47 (377)
Q Consensus 28 ~~~i~v~pG~~yRlRlIN-a~ 47 (377)
+|.++++||+...|||+. .+
T Consensus 52 PPl~rl~p~~~q~lRI~~~~~ 72 (205)
T 1klf_A 52 PPLFAMKGKKENTLRILDATN 72 (205)
T ss_dssp SSEEEECSSEEEEEEEEECSC
T ss_pred CCeEEECCCCceEEEEEecCC
Confidence 578999999999999999 65
Done!