BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017119
(377 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 300/361 (83%), Positives = 315/361 (87%), Gaps = 18/361 (4%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK++NMIKL+GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLL+DTFSAFGVIVTNPKIMRDP+TGNSRGFGFISYDSF+ASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA+NPSSQKSRPHTLFASGPP+L + PQANGTV
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTV 240
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQP-- 298
G PVPPRP+ANGA P PP AAFPPMQVAGQ AWQGQP PQP
Sbjct: 241 GAPVPPRPFANGAVPPGPVPPLRPSAPP-TAAFPPMQVAGQPAWQGQP-------PQPGQ 292
Query: 299 ------VMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPPQQLL 352
+ PPPMQFRPPP PPPPPQ+A + R PPQPMGMG Q VWRQ PPPPQQL
Sbjct: 293 VMPPQVMPPPPMQFRPPPPNMPPPPPQVAQVLPR-PPQPMGMGMQQQVWRQ-PPPPQQLA 350
Query: 353 G 353
G
Sbjct: 351 G 351
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/312 (85%), Positives = 280/312 (89%), Gaps = 10/312 (3%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ+ EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTN HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGFISYDSFEASD+AIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP++QKSRPHTLFASGPP+L +APQANG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSAPQANGV- 239
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAW-QGQPQHIGQGVPQPV 299
PVPPRP+ NG A I +R PPPPQAAAF PM V GQ AW Q QP GQ + P
Sbjct: 240 -APVPPRPFVNGVAPAAIPTLR--PPPPQAAAFQPMPVPGQPAWHQQQP---GQTMLSPA 293
Query: 300 MPPP--MQFRPP 309
MPPP QFRPP
Sbjct: 294 MPPPQIQQFRPP 305
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 296/365 (81%), Positives = 312/365 (85%), Gaps = 5/365 (1%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGF+SYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA+NPS+ KSRPHTLFASGPP+L N PQANG +
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM 240
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAW--QGQPQHIGQGVPQP 298
G P+PPRP+ANG P+ PPPPQ+ AFPPMQ+AG +W Q Q P
Sbjct: 241 GAPMPPRPFANGVVP-PVPIPAMRPPPPQSGAFPPMQLAGPPSWQGQPQQPGQPMQPPMM 299
Query: 299 VMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPPQQLLGRPP-M 357
PP QFRPPP PPPP Q+ A+ RPPP P MG PPV +PPPPPQQL GRPP M
Sbjct: 300 PPPPLQQFRPPPPSMPPPPQQVMQALSRPPPPPALMGGPPPV-WRPPPPPQQLAGRPPTM 358
Query: 358 PHMSM 362
MSM
Sbjct: 359 LQMSM 363
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 288/346 (83%), Positives = 305/346 (88%), Gaps = 9/346 (2%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTT+IAPGVGANLLGQH+ ERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGF+EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP QKSRPHTLFASGPP+L Q NG +
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAI 238
Query: 241 GGPVPPRPYANGAAS-GPISAVRPPPPPPQAAAFPPMQVAGQ-AAWQGQPQHIGQGVPQP 298
G PVPPRP+ANGA + PI A+R P PPQ AFPPM +AGQ AWQGQPQ GQ +P
Sbjct: 239 GAPVPPRPFANGAITPNPIPAIR--PSPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGS 296
Query: 299 VMPPPM-QFRPPPNMPPPPPPQLASAMQRPPPQPMGM-GAQPPVWR 342
++PPP+ QFRPPP P PPPQ A A P P PMGM GAQP +WR
Sbjct: 297 MIPPPVQQFRPPPPNMPLPPPQ-AQAHSMPIPPPMGMGGAQPQLWR 341
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/287 (88%), Positives = 266/287 (92%), Gaps = 4/287 (1%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTN HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD+AIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP++QKSRPHTLFASGPP+L + PQANG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLPSVPQANGV- 239
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQ 287
PVPPRP+ANG A I A+R PPPPQAAAF PM V GQ W Q
Sbjct: 240 -APVPPRPFANGVAPPAIPALR--PPPPQAAAFQPMPVPGQPTWHQQ 283
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/261 (92%), Positives = 252/261 (96%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQ++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTN HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD+AIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP++QKSRPHTLFASGPPSL NAPQANGT+
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTI 240
Query: 241 GGPVPPRPYANGAASGPISAV 261
PVPPRP+ANG A PI +
Sbjct: 241 PAPVPPRPFANGVAPPPIHVI 261
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/344 (80%), Positives = 294/344 (85%), Gaps = 12/344 (3%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTN HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS+DVGANLFIGNLD
Sbjct: 61 VTNSHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSVDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA+NP+ QKSRPHT+FASGPP+LQN QA+ +
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPNVQKSRPHTMFASGPPTLQNVAQASANI 240
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
PVPPRP+ANG P S PPPPQA+ FPPM + +WQGQ Q Q +
Sbjct: 241 AAPVPPRPFANGNVP-PTSIPPFRPPPPQASMFPPMPLPPPQSWQGQ-----QPPGQTAL 294
Query: 301 PPP--MQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWR 342
PPP QFR PPPPPQ+A A+ RPPP P+GM P VWR
Sbjct: 295 PPPPMQQFRS----MPPPPPQIAPALPRPPPPPVGMVTAPNVWR 334
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/336 (76%), Positives = 273/336 (81%), Gaps = 12/336 (3%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK+LNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SYDSFE+SD AIEAMN Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NR ITVSYAYKKDTKGERHGTPAER+LAANNP SQK+RPHT+FASGPP+ Q P
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT-QGLPN----- 234
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
GGP PRPY NG G I +R PPPPP PPMQ+ GQ AW Q Q
Sbjct: 235 GGPPVPRPYGNGTIPGQIQHMRQPPPPPVGQFPPPMQMHGQPAWPAQQPMPPPMASQ--- 291
Query: 301 PPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGA 336
+Q+R P PPP +M RPPP P GM A
Sbjct: 292 ---LQYRLPMRPPPPNMMPPPVSMVRPPPPPTGMSA 324
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 259/336 (77%), Positives = 274/336 (81%), Gaps = 12/336 (3%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK LNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKTLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SY+SFE+SD AIEAMN Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NR ITVSYAYKKDTKGERHGTPAER+LAANNP SQK+RPHT+FASGPP+ Q P
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT-QGHPN----- 234
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
GGP PRPY NG G I +R PPPPP PPMQ+ GQ W Q +P P M
Sbjct: 235 GGPPVPRPYGNGTIPGQIQHIRQPPPPPVGQFPPPMQMHGQPTWPAQ-----HSMPPP-M 288
Query: 301 PPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGA 336
P +Q+R P PPP M RPPP P GM A
Sbjct: 289 PSQLQYRLPMRPPPPNMMPPPVGMVRPPPPPTGMSA 324
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/342 (75%), Positives = 278/342 (81%), Gaps = 14/342 (4%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MT RIAPGVGANLLGQHSAERNQDAT YVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTIRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK+LNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SY+SFE+SD AIEAMN Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NR ITVSYAYKKDTKGERHGTPAER+LA+NNP SQK+RPHT+FASGPP+ Q P
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLASNNPGSQKNRPHTMFASGPPT-QGLPN----- 234
Query: 241 GGPVPPRPYANGAASGPISAVR-PPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPV 299
GGP PRP+ NG G I +R PPPPPP PPMQ+ GQ AW Q +P P
Sbjct: 235 GGPPVPRPFGNGTIPGQIQHIRQPPPPPPVGQFPPPMQMHGQPAWPAQ-----HSMP-PH 288
Query: 300 MPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVW 341
M +Q+R P PPP M RPPP P GM A P +W
Sbjct: 289 MSSQLQYRLPMRPPPPNMMPPPVGMVRPPPPPTGMSA-PHMW 329
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/232 (96%), Positives = 230/232 (99%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGF+SYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQN 232
NRQITVSYAYKKDTKGERHGTPAER+LAA+NPS+ KSRPHTLFASGPP+L N
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPN 232
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/292 (82%), Positives = 258/292 (88%), Gaps = 10/292 (3%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK+LNM+KLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
P+VDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SYDSFE+SD AIEAMN Q+LC
Sbjct: 121 PEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPS--LQNAPQANG 238
NR ITVSYAYKKDTKGERHGTPAER+LAANNP SQK RPHT+FA+ PP+ LQ NG
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKHRPHTMFATAPPTQGLQ-----NG 235
Query: 239 TVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQH 290
VG PV PRP+ANG G + VRPPPPP PMQ+ GQ AW G PQ+
Sbjct: 236 GVGAPV-PRPFANGNVPGQMQHVRPPPPPVGQYP--PMQMHGQPAWPGPPQN 284
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/288 (82%), Positives = 253/288 (87%), Gaps = 9/288 (3%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK+LNM+KLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
P+VDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SYDSFE+SD AIEAMN Q+LC
Sbjct: 121 PEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPS--LQNAPQANG 238
NR ITVSYAYKKDTKGERHGTPAER+LAANNP SQK RPHT+FA+ PP+ LQ NG
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKHRPHTMFATAPPTQGLQ-----NG 235
Query: 239 TVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQG 286
V PV PRP+ANG G I VR PPPP P MQ+ GQ AW G
Sbjct: 236 GVSAPV-PRPFANGNVQGQIQHVRLPPPPIGQYP-PQMQMHGQPAWPG 281
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/307 (77%), Positives = 254/307 (82%), Gaps = 18/307 (5%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVGNLD Q++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATVYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQ YGF+E+RSEEDADYAIKVLNMIK++GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKVHGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAM GQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMTGQYLS 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA NPS+QKSRPHTLFASGPPS NAPQ NG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPSAQKSRPHTLFASGPPS--NAPQVNGL- 237
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
PRP+ANG+ + P P P + +W QPQ Q +
Sbjct: 238 -----PRPFANGS----MQPAPIPAPRQPPPPPPQVYQTQPPSWPSQPQQ------QGFV 282
Query: 301 PPPMQFR 307
PPMQFR
Sbjct: 283 SPPMQFR 289
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/308 (78%), Positives = 257/308 (83%), Gaps = 14/308 (4%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK+LNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SYDSFE+SD AIEAMN Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NR ITVSYAYKKDTKGERHGTPAER+LAANNP SQK+RPHT+FASGPP+ G
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT-------QGLA 233
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
G PRP++NGA I VRPPPPP Q M GQ W Q + P M
Sbjct: 234 NGAPVPRPFSNGAVPPQIQHVRPPPPPMQQFPPMQMN--GQPVWPPQNTQL-----PPHM 286
Query: 301 PPPMQFRP 308
PP M +RP
Sbjct: 287 PPQMHYRP 294
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 23/254 (9%)
Query: 96 IRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG 155
+ N Q + A ++GNLDP V E+LL++ F G +V N + +D T +G
Sbjct: 9 VGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVV-NVYVPKDRVTNLHQG 67
Query: 156 FGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQ 215
+GF+ + S E +D AI+ +N L + I V+ A +D K G A + +P
Sbjct: 68 YGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKA-SQDKKSLDVG--ANLFIGNLDPDVD 124
Query: 216 KSRPHTLFAS-----GPPSLQNAPQANGTVG-GPVPPRPYANGAASGPISAVRPPPPPPQ 269
+ + F++ P + P+ + G G V + ++ I A+ Q
Sbjct: 125 EKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFE--SSDQAIEAMNN-----Q 177
Query: 270 AAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM----PPPMQFRPPPNMPPPPPPQLASAMQ 325
P+ V+ A++ + G P + P Q P M PP A
Sbjct: 178 HLCNRPITVS--YAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQGLANG 235
Query: 326 RPPPQPMGMGAQPP 339
P P+P GA PP
Sbjct: 236 APVPRPFSNGAVPP 249
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/308 (78%), Positives = 257/308 (83%), Gaps = 14/308 (4%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVGNLDPQV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIK+LNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDP+TGNSRGFGF+SYDSFE+SD AIEAMN Q+LC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NR ITVSYAYKKDTKGERHGTPAER+LAANNP SQK+RPHT+FASGPP+ G
Sbjct: 181 NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPT-------QGLA 233
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
G PRP++NGA I VRPPPPP Q M GQ W Q + P M
Sbjct: 234 NGAPVPRPFSNGAVPPQIQHVRPPPPPMQQFPPMQMN--GQPVWPPQNTQL-----PPHM 286
Query: 301 PPPMQFRP 308
PP M +RP
Sbjct: 287 PPQMHYRP 294
>gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
gi|4218014|gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana]
gi|23297611|gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana]
gi|330251682|gb|AEC06776.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
Length = 363
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/307 (76%), Positives = 254/307 (82%), Gaps = 18/307 (5%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVG LD Q++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQ YGF+E+RSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIE+M GQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA NP++QKSRPHTLFA GPPS +APQ NG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS--SAPQVNGL- 237
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
PRP+ANG+ + V P P P + +W QPQ ++
Sbjct: 238 -----PRPFANGS----MQPVPIPAPRQPPPPPPQVYQTQPPSWPSQPQQ------HSMV 282
Query: 301 PPPMQFR 307
PPPMQFR
Sbjct: 283 PPPMQFR 289
>gi|14334958|gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/307 (76%), Positives = 254/307 (82%), Gaps = 18/307 (5%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDAT YVG LD Q++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQ YGF+E+RSEEDADYAIKVLNMIKL+GKP+RVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPMRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIE+M GQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA NP++QKSRPHTLFA GPPS +APQ NG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS--SAPQVNGL- 237
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
PRP+ANG+ + V P P P + +W QPQ ++
Sbjct: 238 -----PRPFANGS----MQPVPIPAPRQPPPPPPQVYQTQPPSWPSQPQQ------HSMV 282
Query: 301 PPPMQFR 307
PPPMQFR
Sbjct: 283 PPPMQFR 289
>gi|21593441|gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/307 (76%), Positives = 253/307 (82%), Gaps = 18/307 (5%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTT IAPGVGANLLGQHSAERNQDAT YVG LD Q++EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTLIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQ YGF+E+RSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIE+M GQYL
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NRQITVSYAYKKDTKGERHGTPAER+LAA NP++QKSRPHTLFA GPPS +APQ NG
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS--SAPQVNGL- 237
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
PRP+ANG+ + V P P P + +W QPQ ++
Sbjct: 238 -----PRPFANGS----MQPVPIPAPRQPPPPPPQVYQTQPPSWPSQPQQ------HSMV 282
Query: 301 PPPMQFR 307
PPPMQFR
Sbjct: 283 PPPMQFR 289
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 101/267 (37%), Gaps = 32/267 (11%)
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
M L + N Q + A +++G LD + E+LL++ F G +V N + +D
Sbjct: 1 MTTLIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVV-NVYVPKD 59
Query: 148 PDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERIL 207
T + +GFI Y S E +D AI+ +N L + I V+ A +D K G A +
Sbjct: 60 RVTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKA-SQDKKSLDVG--ANLFI 116
Query: 208 AANNPSSQKSRPHTLF------ASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPISAV 261
+P + + F AS P +++ N G + + A+ I ++
Sbjct: 117 GNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFE--ASDAAIESM 174
Query: 262 RPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM-----PPPMQFRPPPNM---P 313
Q+ A++ + G P + P + RP P
Sbjct: 175 T-------GQYLSNRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGP 227
Query: 314 PPPPPQLASAMQRPPPQPMGMGAQPPV 340
P PQ+ P+P G+ PV
Sbjct: 228 PSSAPQVNGL-----PRPFANGSMQPV 249
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/267 (84%), Positives = 242/267 (90%), Gaps = 5/267 (1%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRI PGVGANLLGQH+AERNQDATAYVGNLD QV+EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRITPGVGANLLGQHAAERNQDATAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGF+EFRSE+DADYAIK+LNMIKLYGKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61 VTNLHQGYGFIEFRSEDDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEKLLYDTFSAFGVIVTNPKIMRDPD+GNSRGFGFISYDSFEASD+AIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
NR ITVSYAYKKDTKGERHGT AER+LA++NP++ KSRPHTLFASGPPSL PQ +
Sbjct: 181 NRAITVSYAYKKDTKGERHGTLAERMLASSNPNTTKSRPHTLFASGPPSLVGPPQ----L 236
Query: 241 GGPVPPR-PYANGAASGPISAVRPPPP 266
G +PP P ANG P++ PPP
Sbjct: 237 GQGLPPAPPQANGNMGMPMNGHMHPPP 263
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/253 (79%), Positives = 226/253 (89%), Gaps = 6/253 (2%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
M+TRI PGVGANLLGQH+ ERNQDAT YVGNL PQ++E+LL ELFVQAGPVV+V++PKD+
Sbjct: 1 MSTRITPGVGANLLGQHATERNQDATIYVGNLSPQLSEDLLLELFVQAGPVVSVFIPKDK 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNL Q +GFV+FR+EEDADYAIKV NMIKLYG+PIRV KASQDKKSLDVGANLFIGNLD
Sbjct: 61 VTNLQQTFGFVQFRNEEDADYAIKVYNMIKLYGEPIRVKKASQDKKSLDVGANLFIGNLD 120
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
PDVDEK+LYDTFSAFG++ +PKIMRDPDTGN RGFGFISYDSFEASDAAIEAM+GQYL
Sbjct: 121 PDVDEKMLYDTFSAFGMVADHPKIMRDPDTGNPRGFGFISYDSFEASDAAIEAMSGQYLS 180
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
+RQITVSYAYKKDTKGERHGT AER+LAA NPSSQ+SRPHTLFASGP + NAP+ NG
Sbjct: 181 SRQITVSYAYKKDTKGERHGTQAERLLAATNPSSQRSRPHTLFASGPSTQINAPKVNGL- 239
Query: 241 GGPVPPRPYANGA 253
PRP+ANG
Sbjct: 240 -----PRPFANGG 247
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/227 (82%), Positives = 204/227 (89%), Gaps = 2/227 (0%)
Query: 4 RIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
RIAPGVGANL+GQH+ +RNQ+AT YVGNLD Q TEEL+WELF QAGPVVNVY+PKDRVTN
Sbjct: 10 RIAPGVGANLIGQHAQDRNQEATVYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTN 69
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123
HQGYGFVEF+ EEDADYAIKVLNM+K+YGK IRVNKASQDK+ DVGANLFIGNLDPDV
Sbjct: 70 AHQGYGFVEFKGEEDADYAIKVLNMVKVYGKAIRVNKASQDKRQADVGANLFIGNLDPDV 129
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
DEKLLYDTFSAFGVIV PKIMRDPDTGNSRGFGF+SYD FEASDAAIEAMNGQYLCNR
Sbjct: 130 DEKLLYDTFSAFGVIVNTPKIMRDPDTGNSRGFGFVSYDCFEASDAAIEAMNGQYLCNRA 189
Query: 184 ITVSYAYKKDTKGERHGTPAERILAA--NNPSSQKSRPHTLFASGPP 228
ITVSYA+KKDTKGERHGTPAER+LAA ++ +SRP+ LFA GP
Sbjct: 190 ITVSYAFKKDTKGERHGTPAERLLAAQMREKAAAQSRPNMLFAEGPK 236
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 177/221 (80%), Positives = 199/221 (90%), Gaps = 1/221 (0%)
Query: 4 RIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
RI G+NLLGQH+ +RNQ+AT YVGNLDPQVTEE++WE+FVQAGPVVNVY+PKDRV+N
Sbjct: 10 RITASAGSNLLGQHAVDRNQEATVYVGNLDPQVTEEIVWEVFVQAGPVVNVYMPKDRVSN 69
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123
HQGY FVE+R EEDADYAIKVLNMIKL+GKPIR NKAS DKKS DVGANLF+GNLDPD+
Sbjct: 70 AHQGYAFVEYRGEEDADYAIKVLNMIKLFGKPIRANKASVDKKSTDVGANLFVGNLDPDM 129
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
DEKLLYDTFSAFGV++T PKIMRDPDTGNSRGFGF+SYDSFEASDAAIEAMNGQ+LCNR
Sbjct: 130 DEKLLYDTFSAFGVVITTPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQFLCNRP 189
Query: 184 ITVSYAYKKDTKGERHGTPAERILAAN-NPSSQKSRPHTLF 223
I+V+YAYKKDT GERHGTPAER+LAAN + RPHT+F
Sbjct: 190 ISVTYAYKKDTNGERHGTPAERLLAANMEKKTTTHRPHTMF 230
>gi|384250449|gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 358
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/226 (79%), Positives = 205/226 (90%), Gaps = 2/226 (0%)
Query: 4 RIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
RI GVGANL+GQH+ +RNQDAT YVGNLD Q++EEL+WELFVQ+GPVVNVY+PKDRVT+
Sbjct: 8 RITAGVGANLIGQHAQDRNQDATVYVGNLDVQLSEELVWELFVQSGPVVNVYLPKDRVTS 67
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123
HQGYGFVEF+SE+DADYAIK+LNMIK+YGKPIRVNKASQDKK+ DVGANLFIGN+DPDV
Sbjct: 68 QHQGYGFVEFKSEDDADYAIKILNMIKVYGKPIRVNKASQDKKTQDVGANLFIGNIDPDV 127
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
DEKLLYDTFSAFG+I+ PKIMRDP+TG ++GFGF+SYDSFEASDAAIEAMNGQ+LCNR
Sbjct: 128 DEKLLYDTFSAFGMIIQTPKIMRDPETGATKGFGFVSYDSFEASDAAIEAMNGQFLCNRP 187
Query: 184 ITVSYAYKKDTKGERHGTPAERILAA--NNPSSQKSRPHTLFASGP 227
ITVS+AYKKDTKGERHG+ AER LA ++ SRPHTLFASGP
Sbjct: 188 ITVSFAYKKDTKGERHGSEAERQLATQQRTKAAAASRPHTLFASGP 233
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/184 (98%), Positives = 184/184 (100%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDATAYVGNLDPQV+EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA
Sbjct: 1 ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 60
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLL+DTFSAFGVIV
Sbjct: 61 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLHDTFSAFGVIV 120
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
TNPKIMRDP+TGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH
Sbjct: 121 TNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 180
Query: 200 GTPA 203
GTPA
Sbjct: 181 GTPA 184
>gi|307110375|gb|EFN58611.1| hypothetical protein CHLNCDRAFT_10145, partial [Chlorella
variabilis]
Length = 329
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 167/206 (81%), Positives = 191/206 (92%)
Query: 4 RIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
RI GVGANL+G HSA+RNQ+AT YVGN+DPQ EEL+WELFVQAGPVVNVY+PKDRVTN
Sbjct: 1 RITAGVGANLIGVHSADRNQEATCYVGNIDPQANEELIWELFVQAGPVVNVYLPKDRVTN 60
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123
HQ YGFVEFRSEEDADYAIK+LNM+K+YGKP+RVNKA+QD+ + DVGANLFIG LDP+V
Sbjct: 61 EHQSYGFVEFRSEEDADYAIKILNMVKVYGKPLRVNKAAQDRNTADVGANLFIGGLDPEV 120
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
DEKLLYDTFSAFGVIV NPKIMRDPDTG ++GFGF+S+DSFEASDAA+EAMNGQYL NR
Sbjct: 121 DEKLLYDTFSAFGVIVNNPKIMRDPDTGLTKGFGFLSFDSFEASDAALEAMNGQYLMNRP 180
Query: 184 ITVSYAYKKDTKGERHGTPAERILAA 209
+++SYA+KKDTKGERHGTPAER+LAA
Sbjct: 181 LSISYAFKKDTKGERHGTPAERLLAA 206
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/210 (80%), Positives = 193/210 (91%), Gaps = 1/210 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT YVGNLD TEE+LWE+FVQAGPVVNVYVPKDRV+N HQGYGFVEF +EEDA
Sbjct: 3 DRNQDATIYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDA 62
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIKVLNMIKL+GKP+RVNKASQDKKS DVGANLF+GNLD ++DEKLLYDTFSAFGV++
Sbjct: 63 DYAIKVLNMIKLHGKPVRVNKASQDKKSNDVGANLFVGNLDSELDEKLLYDTFSAFGVVI 122
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T PKIMRDPD+GNSRGFGF+SYDSFEA+DAAIEAMNGQ+LCNR I+V++AYKKDT+GERH
Sbjct: 123 TTPKIMRDPDSGNSRGFGFVSYDSFEAADAAIEAMNGQFLCNRPISVTFAYKKDTRGERH 182
Query: 200 GTPAERILAANNPSSQKS-RPHTLFASGPP 228
GTPAER+LAAN S + RPHT+F++GP
Sbjct: 183 GTPAERMLAANMERSVATHRPHTMFSAGPA 212
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N Q + A +VGNLD ++ E+LL++ F G V+ + +D + +G
Sbjct: 79 VRVNKASQDKKSNDVGANLFVGNLDSELDEKLLYDTFSAFGVVITTPKIMRDPDSGNSRG 138
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+GFV + S E AD AI+ +N L +PI V A
Sbjct: 139 FGFVSYDSFEAADAAIEAMNGQFLCNRPISVTFA 172
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 196/226 (86%), Gaps = 1/226 (0%)
Query: 4 RIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
RI G G NLLGQH A+RN +AT YVGNLDPQVTEE+LWELF+QAGPV NVYVPKDRVT+
Sbjct: 8 RITAGAGVNLLGQHGADRNAEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTS 67
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123
HQGYGFVEFR+EEDA+Y IK+LNM+KL+GKPI+VNK+ D++ +VGANLFIGNLDPD+
Sbjct: 68 THQGYGFVEFRNEEDAEYGIKILNMVKLFGKPIKVNKSVGDRRD-EVGANLFIGNLDPDI 126
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
DEKLLYDTFSAFGV++ PKIMRDPD G S+GFGF++YDSFEASDAAIEAMNGQ+LCN+Q
Sbjct: 127 DEKLLYDTFSAFGVVINTPKIMRDPDNGASKGFGFVAYDSFEASDAAIEAMNGQFLCNKQ 186
Query: 184 ITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPS 229
I V YAYKKD+KGERHG+ AER+LA + RPHTLF++GP S
Sbjct: 187 INVQYAYKKDSKGERHGSQAERLLAQSIERPTMVRPHTLFSAGPSS 232
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 86/224 (38%), Gaps = 34/224 (15%)
Query: 98 VNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFG 157
VN Q + A +++GNLDP V E++L++ F G VTN + +D T +G+G
Sbjct: 15 VNLLGQHGADRNAEATVYVGNLDPQVTEEVLWELFLQAGP-VTNVYVPKDRVTSTHQGYG 73
Query: 158 FISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKS 217
F+ + + E ++ I+ +N L + I V+ K R A + +P +
Sbjct: 74 FVEFRNEEDAEYGIKILNMVKLFGKPIKVN----KSVGDRRDEVGANLFIGNLDPDIDEK 129
Query: 218 RPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPM- 276
+ F++ + P R NGA+ G V AA M
Sbjct: 130 LLYDTFSA----------FGVVINTPKIMRDPDNGASKG-FGFVAYDSFEASDAAIEAMN 178
Query: 277 -------QVAGQAAWQGQPQH----------IGQGVPQPVMPPP 303
Q+ Q A++ + + Q + +P M P
Sbjct: 179 GQFLCNKQINVQYAYKKDSKGERHGSQAERLLAQSIERPTMVRP 222
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 191/219 (87%), Gaps = 4/219 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEALLWELFLQAGPVVNTHMPKDRVTQAHQGYGFVEFMSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR IT+SYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPETGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITISYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQAN 237
HG+ AER+LAA NP SQ RPH LFA PP+ PQ+N
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPT----PQSN 221
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S + +D AI+ +N L +PI ++ A
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITISYA 177
>gi|240848881|ref|NP_001155373.1| spliceosome associated protein-like [Acyrthosiphon pisum]
gi|239792048|dbj|BAH72409.1| ACYPI000210 [Acyrthosiphon pisum]
Length = 370
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 162/211 (76%), Positives = 187/211 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +V++ L+WELFVQAGPVVNV++PKDRVT HQGYGFVEF +E+D
Sbjct: 7 AERNQDATIYVGGLDEKVSDTLMWELFVQAGPVVNVHMPKDRVTQSHQGYGFVEFLAEDD 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANVFIGNLDSEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+GF FI+Y SFEASDAAIEAMNGQ+LCNR +++SYA+KKD KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGFAFINYASFEASDAAIEAMNGQHLCNRAVSISYAFKKDVKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPS 229
HG+ AER+LAA NP SQ RPH LFA PP+
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPT 217
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANVFIGNLDSEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ + S E +D AI+ +N L + + ++ A
Sbjct: 144 FAFINYASFEASDAAIEAMNGQHLCNRAVSISYA 177
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 170/241 (70%), Positives = 199/241 (82%), Gaps = 6/241 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +VTE LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF EEDA
Sbjct: 8 ERNQDATVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIKVLNMIKLYGKP+RVNKAS +K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 68 DYAIKVLNMIKLYGKPVRVNKASAHQKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD ++GNS+G+ FI++ SFEA+DAAIEAMNGQYLCNR IT+S+A+KKD++GERH
Sbjct: 128 QTPKIMRDVESGNSKGYAFINFASFEAADAAIEAMNGQYLCNRAITISFAFKKDSRGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVG--GPVPPRPYANGAASGP 257
G+ AER+LAA NP SQ RPH LFA PP+ QANG V G PP P + G A+
Sbjct: 188 GSAAERLLAAQNPLSQADRPHQLFADAPPT----AQANGVVSSLGQAPPPPPSGGTATSN 243
Query: 258 I 258
+
Sbjct: 244 V 244
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N H + A ++GNLDP++ E+LL++ F G ++ + +D + +G
Sbjct: 84 VRVNKASAHQKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDVESGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S E AD AI+ +N L + I ++ A
Sbjct: 144 YAFINFASFEAADAAIEAMNGQYLCNRAITISFA 177
>gi|147840632|emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
Length = 312
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 235/365 (64%), Positives = 249/365 (68%), Gaps = 66/365 (18%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Sbjct: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-------------------- 100
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
DVDEKLLYDTFSAFGVIVTNPK
Sbjct: 101 -DVDEKLLYDTFSAFGVIVTNPK------------------------------------- 122
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 240
ITVSYAYKKDTKGERHGTPAER+LAA+NPS+ KSRPHTLFASGPP+L N PQANG +
Sbjct: 123 ---ITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM 179
Query: 241 GGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAW--QGQPQHIGQGVPQP 298
G P+PPRP+ANG P+ PPPPQ+ AFP MQ+AG +W Q Q
Sbjct: 180 GAPMPPRPFANGVVP-PVPIPAMRPPPPQSGAFPXMQLAGPPSWQGQPQQPGQPMQPXMM 238
Query: 299 VMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPPQQLLGRPP-M 357
PP QFRPPP PPPP Q+ A+ RPPP P MG PPV +PPPPPQQL GRPP M
Sbjct: 239 PPPPLQQFRPPPPSMPPPPQQVMXALSRPPPPPALMGGPPPV-WRPPPPPQQLAGRPPTM 297
Query: 358 PHMSM 362
MSM
Sbjct: 298 LQMSM 302
>gi|148226626|ref|NP_001080100.1| splicing factor 3b, subunit 4, 49kDa [Xenopus laevis]
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]
Length = 377
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 163/206 (79%), Positives = 184/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI+Y SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ + S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|148229719|ref|NP_001086794.1| MGC82420 protein [Xenopus laevis]
gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis]
Length = 383
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 163/206 (79%), Positives = 184/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI+Y SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ + S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINYASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 164/210 (78%), Positives = 186/210 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPP 228
HG+ AER+LAA NP SQ RPH LFA PP
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPP 216
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 163/209 (77%), Positives = 185/209 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE LLWELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +KSLDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKSLDVGANIFIGNLDLEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NP S RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPLSHADRPHQLFADAP 215
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKSLDVGANIFIGNLDLEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|112983328|ref|NP_001037646.1| spliceosomal protein on the X [Bombyx mori]
gi|109706833|gb|ABG43003.1| spliceosomal protein on the X [Bombyx mori]
Length = 342
Score = 356 bits (914), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 185/212 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE LLWELFVQ+GPVVNV++PKDRVT HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIKV+NMIKLYGKP+RVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PK+MRDP+TGNS+ F FI++ SFEASDAAIEAMN QYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSL 230
HG+ AER+LAA NP S RPH LFA PP+L
Sbjct: 187 HGSAAERLLAAQNPLSHADRPHQLFADAPPTL 218
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N H + A ++GNLDP+V E+LL++ F G ++ V +D T +
Sbjct: 84 VRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKA 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D AI+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAIEAMNNQYLCNRPISVSYA 177
>gi|391337396|ref|XP_003743055.1| PREDICTED: uncharacterized protein LOC100908642 [Metaseiulus
occidentalis]
Length = 543
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 160/210 (76%), Positives = 187/210 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +V++ LLWELFVQAGP+V+V++PKDR+T LHQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDEKVSDNLLWELFVQAGPIVSVHMPKDRITGLHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIKV+NMIKLYGKP+RVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF F+++ SFEASDAAI+AMNGQYLCNR I++SYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFVNFASFEASDAAIDAMNGQYLCNRAISISYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPP 228
HG+ AER+LAA NP S RPH LFA PP
Sbjct: 187 HGSAAERLLAAQNPLSIGDRPHQLFADAPP 216
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 VRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ FV F S E +D AI +N L + I ++ A +D K
Sbjct: 144 FAFVNFASFEASDAAIDAMNGQYLCNRAISISYAFKKDSK 183
>gi|307167809|gb|EFN61250.1| Splicing factor 3B subunit 4 [Camponotus floridanus]
Length = 409
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 184/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+K+D KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKRDAKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|350406084|ref|XP_003487648.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus impatiens]
Length = 413
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 184/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+K+D KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKRDAKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 163/206 (79%), Positives = 186/206 (90%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERN+DAT YVG LD +VTE LLWELFVQ+GP+VNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNRDATIYVGGLDDKVTESLLWELFVQSGPLVNVHMPKDRVTMMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+GF FI++ SFEASDA+IEAMNGQYLCNR I+VSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGFAFINFASFEASDASIEAMNGQYLCNRPISVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ F+ F S E +D +I+ +N L +PI V+ A +D K
Sbjct: 144 FAFINFASFEASDASIEAMNGQYLCNRPISVSYAFKKDSK 183
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/210 (77%), Positives = 185/210 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +V+E L+WELF+Q+GPVVNV++PKDR+T LHQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIKV+NMIK+YGKPIRVNKAS K+LDVGANLFIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKVMNMIKVYGKPIRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRD DTGNS+GF FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KK++KGER
Sbjct: 127 LQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKESKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPP 228
HG+ AER+LAA NP +Q RPH LFA PP
Sbjct: 187 HGSAAERLLAAQNPLAQADRPHQLFADAPP 216
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLD +V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D AI+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 177
>gi|357614441|gb|EHJ69078.1| spliceosomal protein on the X [Danaus plexippus]
Length = 334
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/212 (77%), Positives = 184/212 (86%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE LLWELFVQAGPVVNV++PKDRVT HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIKV+NMIKLYGKP+RVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PK+MRDP+TGNS+ F FI++ SFEASDAAIEAMN QYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSL 230
HG+ AER+LAA NP S RPH LFA PP +
Sbjct: 187 HGSAAERLLAAQNPLSHADRPHQLFADAPPIM 218
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N H + A ++GNLDP+V E+LL++ F G ++ V +D T +
Sbjct: 84 VRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKA 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D AI+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAIEAMNNQYLCNRPISVSYA 177
>gi|321479244|gb|EFX90200.1| hypothetical protein DAPPUDRAFT_40110 [Daphnia pulex]
Length = 268
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/210 (77%), Positives = 186/210 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +VTE LLWELFVQ GPVVNV++PKDR+T LHQGYGF+EF SE+D
Sbjct: 7 SERNQDATIYVGGLDEKVTEPLLWELFVQGGPVVNVHMPKDRITLLHQGYGFIEFLSEDD 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYA K++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYACKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP TGNS+GF FI++ SF+ASDAAIEAMNGQYLCNR IT+SYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPTTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITISYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPP 228
HG+ AER+LAA NP +Q RPH LFA PP
Sbjct: 187 HGSAAERLLAAQNPLAQTDRPHQLFADAPP 216
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPTTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ F+ F S + +D AI+ +N L +PI ++ A +D K
Sbjct: 144 FAFINFASFDASDAAIEAMNGQYLCNRPITISYAFKKDSK 183
>gi|241708466|ref|XP_002403282.1| spliceosome associated protein, putative [Ixodes scapularis]
gi|215505045|gb|EEC14539.1| spliceosome associated protein, putative [Ixodes scapularis]
Length = 408
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 184/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +V++ +LWELFVQAGPVVNV++PKDRVT HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDEKVSDTILWELFVQAGPVVNVHMPKDRVTGHHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SFEASDAAIEAMNGQYLCNR IT+SYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFEASDAAIEAMNGQYLCNRAITISYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP + RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLAHSDRPHQLFA 212
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S E +D AI+ +N L + I ++ A +D K
Sbjct: 144 YAFINFASFEASDAAIEAMNGQYLCNRAITISYAFKKDSK 183
>gi|48097884|ref|XP_393914.1| PREDICTED: splicing factor 3B subunit 4 [Apis mellifera]
Length = 413
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 184/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+K+D KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKRDAKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|380011609|ref|XP_003689892.1| PREDICTED: splicing factor 3B subunit 4-like [Apis florea]
Length = 413
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 184/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+K+D KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKRDAKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|291224886|ref|XP_002732430.1| PREDICTED: splicing factor 3b, subunit 4-like [Saccoglossus
kowalevskii]
Length = 388
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 160/213 (75%), Positives = 188/213 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+Q+GPVVN ++PKDRVT HQGYGFVEF EED
Sbjct: 7 SERNQDATVYVGGLDEKVSEALLWELFLQSGPVVNTHMPKDRVTQQHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIK+YGKPIRVNKAS +K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKIYGKPIRVNKASAHQKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP++GNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR IT+SYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPESGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITISYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
HG+ AER+LAA NP SQ RPH LFA PPS Q
Sbjct: 187 HGSAAERLLAAQNPLSQMDRPHQLFADAPPSSQ 219
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP++ E+LL++ F G ++ + +D + +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPESGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S + +D AI+ +N L +PI ++ A
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITISYA 177
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 185/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +V+E LLWE+FVQAGPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP S RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSHADRPHQLFA 212
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ F+ F S E +D A+ +N L +PI V+ A +D K
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDSK 183
>gi|383857497|ref|XP_003704241.1| PREDICTED: splicing factor 3B subunit 4-like [Megachile rotundata]
Length = 413
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 184/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+K+D KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKRDAKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 162/206 (78%), Positives = 184/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 185/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +V+E LLWE+FVQAGPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP S RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSHADRPHQLFA 212
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRS 75
H + A ++GNLDP+V E+LL++ F G ++ + +D T +G+ F+ F S
Sbjct: 92 HQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFAS 151
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
E +D A+ +N L +PI V+ A +D K
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDSK 183
>gi|432882405|ref|XP_004074014.1| PREDICTED: splicing factor 3B subunit 4-like [Oryzias latipes]
Length = 344
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 162/206 (78%), Positives = 184/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRS 75
H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +GY F+ F S
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ +D AI+ +N L +PI V+ A +D K
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 162/209 (77%), Positives = 184/209 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD + TE LLWELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKATETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +KSLDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKSLDVGANIFIGNLDLEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NP S RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPLSHADRPHQLFADAP 215
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRS 75
H + A ++GNLD +V E+LL++ F G ++ + +D T +G+ F+ F S
Sbjct: 92 HQKSLDVGANIFIGNLDLEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFAS 151
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
E +D A+ +N L +PI V+ A +D K
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDSK 183
>gi|332028466|gb|EGI68509.1| Splicing factor 3B subunit 4 [Acromyrmex echinatior]
Length = 410
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 184/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+K+D KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKRDAKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 162/206 (78%), Positives = 184/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S + +D AI+ +N L +PI V+ A
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 177
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 162/206 (78%), Positives = 184/206 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|358337762|dbj|GAA56093.1| splicing factor 3B subunit 4 [Clonorchis sinensis]
Length = 363
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 155/205 (75%), Positives = 185/205 (90%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD + TE +LWELF+QAGPVVNV++PKDR+T HQGYGFVEF +EEDA
Sbjct: 8 ERNQDATIYVGGLDEKTTESILWELFLQAGPVVNVHMPKDRITMQHQGYGFVEFMTEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA++++NMIKL+GKPIRVNKAS ++K+LD+GAN+FIGNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68 DYAMRIMNMIKLFGKPIRVNKASANQKNLDIGANIFIGNLDPEVDEKLLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRDP+TGNS+G+ FI++ SFEASDAAIEAMNGQYLCNR IT+SYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRAITISYAFKKDSKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFA 224
G+ AER+LAA +P SQ RPH LFA
Sbjct: 188 GSAAERLLAAQSPLSQAERPHQLFA 212
>gi|443717173|gb|ELU08367.1| hypothetical protein CAPTEDRAFT_163289 [Capitella teleta]
Length = 412
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 157/210 (74%), Positives = 184/210 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +V+E +LWELF+QAGPVVNV++PKDR++ HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVSESILWELFLQAGPVVNVHMPKDRISQAHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAI+++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIRIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+GF FI++ SFE SD+AIEAMNGQYLCNR I++SYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGFAFINFASFETSDSAIEAMNGQYLCNRAISISYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPP 228
HG+ AER+LA NP +Q RPH LFA P
Sbjct: 187 HGSAAERLLAQQNPLTQVDRPHQLFADAPT 216
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRS 75
H + A ++GNLDP+V E+LL++ F G ++ + +D T +G+ F+ F S
Sbjct: 92 HQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINFAS 151
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA 101
E +D AI+ +N L + I ++ A
Sbjct: 152 FETSDSAIEAMNGQYLCNRAISISYA 177
>gi|195340414|ref|XP_002036808.1| GM12470 [Drosophila sechellia]
gi|194130924|gb|EDW52967.1| GM12470 [Drosophila sechellia]
Length = 299
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/228 (72%), Positives = 191/228 (83%), Gaps = 3/228 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADY IK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQN-APQANGTVGGPVP 245
HG+ AER+LAA NPS RPH LFA P +QN PQ G + G +P
Sbjct: 187 HGSAAERLLAAQNPSIHADRPHQLFADAP--VQNMMPQMQGQMAGQMP 232
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/209 (77%), Positives = 184/209 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|52547949|gb|AAM28203.2| splicing factor 3b subunit 4 [Danio rerio]
Length = 400
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 183/206 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDA YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDAAVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S + +D AI+ +N L +PI V+ A
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 177
>gi|301789695|ref|XP_002930273.1| PREDICTED: splicing factor 3B subunit 4-like, partial [Ailuropoda
melanoleuca]
Length = 252
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S + +D AI+ +N L +PI V+ A
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 177
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/228 (73%), Positives = 192/228 (84%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP 246
HG+ AER+LAA NP SQ RPH LFA PP ++G +PP
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPP 234
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 161/209 (77%), Positives = 184/209 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ F+ F S E +D A+ +N L +PI V+ A +D K
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHK 183
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 161/209 (77%), Positives = 184/209 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/228 (73%), Positives = 192/228 (84%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP 246
HG+ AER+LAA NP SQ RPH LFA PP ++G +PP
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPP 234
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 183/209 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 184/209 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PK+MRDP+TG S+GF FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKLMRDPETGKSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKLMRDPETGKSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|440797982|gb|ELR19056.1| spliceosomal protein, putative [Acanthamoeba castellanii str. Neff]
Length = 316
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 158/209 (75%), Positives = 189/209 (90%), Gaps = 3/209 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V+E LLWEL +Q+GPVVNVY+PKD++TNLHQGYGFVEF +EEDA
Sbjct: 6 ERNQDATVYVGELDSRVSEALLWELMLQSGPVVNVYIPKDKLTNLHQGYGFVEFATEEDA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YAIK++NMIKLYGKP+RVNKA +D K++DVGANLFIGNLD +VDEKLLYDTFSAFGVI+
Sbjct: 66 EYAIKIMNMIKLYGKPLRVNKAKRDGKTVDVGANLFIGNLDAEVDEKLLYDTFSAFGVII 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GER 198
T PKIMRDP+TG SRGFGF+S+DSFE+SDAAIE+MN QYLCNR ITVSYA KKD+K GER
Sbjct: 126 TTPKIMRDPETGESRGFGFVSFDSFESSDAAIESMNNQYLCNRAITVSYAIKKDSKTGER 185
Query: 199 HGTPAERILAANNPSS--QKSRPHTLFAS 225
HG+ AER+LAANNP+ ++RP+T+FA+
Sbjct: 186 HGSAAERLLAANNPARFVTQTRPNTMFAA 214
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 184/207 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFAS 225
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFAD 213
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 183/209 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [Felis
catus]
Length = 424
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 183/209 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis carolinensis]
Length = 417
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 184/207 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFAS 225
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFAD 213
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 350 bits (897), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 1 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 60
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 61 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 120
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 121 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 180
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 181 HGSAAERLLAAQNPLSQADRPHQLF 205
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 78 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 137
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 138 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 177
>gi|196007894|ref|XP_002113813.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
gi|190584217|gb|EDV24287.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
Length = 291
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 157/213 (73%), Positives = 184/213 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVGNLD +V+E LLWELF+QAGPVVNV++PKDR+T HQGYGF+EF E+DA
Sbjct: 8 ERNQDATIYVGNLDEKVSETLLWELFLQAGPVVNVHMPKDRITQAHQGYGFIEFLGEDDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP+VDEK LYDTFSAFGVI+
Sbjct: 68 DYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANVFIGNLDPEVDEKQLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRDP+TG S+GF FI++ SF+ASDAA+EAMNGQ+LCNR I VSYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPETGQSKGFAFINFASFDASDAAMEAMNGQFLCNRTINVSYAFKKDSKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQN 232
G+ AER+LAA NP Q RPH LFA PP+ +
Sbjct: 188 GSAAERLLAAQNPLVQSDRPHQLFADAPPTFTD 220
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP+V E+ L++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANVFIGNLDPEVDEKQLYDTFSAFGVILQTPKIMRDPETGQSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D A++ +N L + I V+ A
Sbjct: 144 FAFINFASFDASDAAMEAMNGQFLCNRTINVSYA 177
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 183/209 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 160/206 (77%), Positives = 186/206 (90%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDKVTEPLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLL+DTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLFDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPD+GNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+KKD++GER
Sbjct: 127 LQTPKIMRDPDSGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKKDSRGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFA 212
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D + +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLFDTFSAFGVILQTPKIMRDPDSGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/228 (71%), Positives = 187/228 (82%), Gaps = 13/228 (5%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
ERNQDAT YVG LD +VTE LL ELF+Q GPVVN ++PKDRVT HQGYGFVEF SE+D
Sbjct: 5 TERNQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDD 64
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK+LNMIKL+GKP+RVNKAS +K+LDVGANLFIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 65 ADYAIKILNMIKLFGKPVRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVI 124
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+GF FI+Y SFEA+DAA+EAMNGQYLCNR IT+S+A+KKD KGER
Sbjct: 125 LQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFAFKKDGKGER 184
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP 246
HG+ AER+LAA NP + RPHT+FA G VGG PP
Sbjct: 185 HGSAAERLLAAQNPMATNDRPHTMFADG-------------VGGNAPP 219
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N H + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 82 VRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 141
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ + S E AD A++ +N L +PI ++ A
Sbjct: 142 FAFINYSSFEAADAALEAMNGQYLCNRPITISFA 175
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 158/207 (76%), Positives = 182/207 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +VTE LL ELF+Q GPVVN ++PKDRVT HQGYGFVEF SE+DA
Sbjct: 6 ERNQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK+LNMIKL+GKP+RVNKAS +K+LDVGANLFIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 66 DYAIKILNMIKLFGKPVRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVIL 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRDPDTGNS+GF FI+Y SFEA+DAA+EAMNGQYLCNR IT+S+A+KKD KGERH
Sbjct: 126 QTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITISFAFKKDGKGERH 185
Query: 200 GTPAERILAANNPSSQKSRPHTLFASG 226
G+ AER+LAA NP + RPHT+FA G
Sbjct: 186 GSAAERLLAAQNPMATNDRPHTMFADG 212
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N H + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 82 VRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 141
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ + S E AD A++ +N L +PI ++ A
Sbjct: 142 FAFINYSSFEAADAALEAMNGQYLCNRPITISFA 175
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 5 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 64
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 65 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 124
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 125 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 184
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 185 HGSAAERLLAAQNPLSQADRPHQLF 209
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 82 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 141
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 142 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 181
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 183/209 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSAHADRPHQLFADAP 215
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 184/207 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFAS 225
HG+ AER+LAA NP SQ RPH LFA
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLFAD 213
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIM+DPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMQDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMQDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK+++MIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMDMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/205 (78%), Positives = 183/205 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|323451637|gb|EGB07513.1| hypothetical protein AURANDRAFT_59062 [Aureococcus anophagefferens]
Length = 350
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 153/208 (73%), Positives = 183/208 (87%), Gaps = 2/208 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT YVGNLD Q+TEELLWE+ +QAGP+ NV++P+D+VT HQGYGFVEFRSEEDA
Sbjct: 8 QRNQDATCYVGNLDEQLTEELLWEMMLQAGPIGNVHLPRDKVTGSHQGYGFVEFRSEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+KV+NM+KL+GKP+RVNKASQDKK+L+VGANLF+G LD DVDEKLLYDTFSAFG I
Sbjct: 68 DYALKVMNMVKLFGKPLRVNKASQDKKTLEVGANLFVGGLDVDVDEKLLYDTFSAFGTIT 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRDPDTGNS+GFGF+SYDSFEASD AIE M+ Q+LCN+Q+ V YA+K+D+K ERH
Sbjct: 128 ETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
G+ AER+LAANNP S K PH +F +GP
Sbjct: 188 GSQAERLLAANNPMSAK--PHAMFGTGP 213
>gi|17530817|ref|NP_511058.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|7290689|gb|AAF46136.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|68051249|gb|AAY84889.1| RE50839p [Drosophila melanogaster]
gi|220952204|gb|ACL88645.1| Spx-PA [synthetic construct]
Length = 347
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 159/209 (76%), Positives = 182/209 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT Y G LD +V+E LLWELFVQAGPVVNV++PKDRVT +HQGYGFVEF SEED
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADY IK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLD +VDEKLLYDTFSAFGVI
Sbjct: 67 ADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 HGSAAERLLAAQNPSTHADRPHQLFADAP 215
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D A+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYA 177
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 156/206 (75%), Positives = 183/206 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG+LD +VTE +LWELF+QAGPVVNV++PKDRVT HQGYGFVEF EED
Sbjct: 7 AERNQDATVYVGSLDDKVTEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SFEA+DAA+EAMNGQ+LCNR I++S+A+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFEAADAALEAMNGQFLCNRAISISFAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFA 224
HG+ AER +A NP S RPH LFA
Sbjct: 187 HGSAAERFMAKQNPLSLTDRPHQLFA 212
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S E AD A++ +N L + I ++ A
Sbjct: 144 YAFINFASFEAADAALEAMNGQFLCNRAISISFA 177
>gi|307208549|gb|EFN85888.1| Splicing factor 3B subunit 4 [Harpegnathos saltator]
Length = 429
Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 159/216 (73%), Positives = 184/216 (85%), Gaps = 11/216 (5%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPV-----------VNVYVPKDRVTNLHQG 67
AERNQDAT YVG LD +VTE L+WELFVQ+GPV +NV++PKDRVT +HQG
Sbjct: 7 AERNQDATIYVGGLDDKVTESLMWELFVQSGPVGMYIYISFMHVLNVHMPKDRVTQMHQG 66
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKL 127
YGFVEF EEDADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKL
Sbjct: 67 YGFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKL 126
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
LYDTFSAFGVI+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VS
Sbjct: 127 LYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVS 186
Query: 188 YAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLF 223
YA+K+D KGERHG+ AER+LAA NP SQ RPH LF
Sbjct: 187 YAFKRDAKGERHGSAAERLLAAQNPLSQADRPHQLF 222
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 95 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 154
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 155 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 188
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 158/205 (77%), Positives = 182/205 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCN IT+SYA++KD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNCPITISYAFRKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S + +D AI+ +N L PI ++ A
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNCPITISYA 177
>gi|198425590|ref|XP_002119350.1| PREDICTED: similar to splicing factor 3b, subunit 4 [Ciona
intestinalis]
Length = 375
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 156/212 (73%), Positives = 184/212 (86%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V E LLWELF+QAG VV+ ++PKDR++ HQGYGFVEF +EED
Sbjct: 7 SERNQDATVYVGGLDEKVAEPLLWELFLQAGVVVSTHMPKDRISGSHQGYGFVEFLAEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK+LNMIKLYGKPIRVNKAS +K+LDVGANLFIGNLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKILNMIKLYGKPIRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SFEASDAA+EAMNGQ+LCNR I++SYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFEASDAAMEAMNGQHLCNRPISISYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSL 230
HG AER+LA NP SQ RPHT+FA P +
Sbjct: 187 HGGAAERLLAVQNPLSQADRPHTMFADAPSEM 218
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 18 SAERNQD--ATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFR 74
S ++N D A ++GNLDP++ E+LL++ F G ++ + +D T +GY F+ F
Sbjct: 91 SHQKNLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFA 150
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
S E +D A++ +N L +PI ++ A +D K
Sbjct: 151 SFEASDAAMEAMNGQHLCNRPISISYAFKKDSK 183
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 159/205 (77%), Positives = 181/205 (88%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKA K+LDVGAN+FI NLDP++DEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKALAHNKNLDVGANIFIENLDPEIDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGER
Sbjct: 127 LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRS 75
H+ + A ++ NLDP++ E+LL++ F G ++ + +D T +GY F+ F S
Sbjct: 92 HNKNLDVGANIFIENLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ +D AI+ +N L +PI V+ A +D K
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183
>gi|299117359|emb|CBN75315.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 529
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 182/212 (85%), Gaps = 2/212 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y GNLD VTE LLWEL +QAGPV NV++PKD++T +HQG+GFVEFRSE+DA
Sbjct: 7 QRNQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YAIK++NM+KL+GKP+RVNKASQD+K+ DVGANLFIG LDPDVDEK+LYDTFSAFG I
Sbjct: 67 EYAIKIMNMVKLFGKPLRVNKASQDRKANDVGANLFIGQLDPDVDEKMLYDTFSAFGFIT 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PK+MRDPDTG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERH
Sbjct: 127 QTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERH 186
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
G AER+LA+NNPS K + HTLF+ P ++
Sbjct: 187 GGQAERLLASNNPS--KFKVHTLFSVAPGKIE 216
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 4 RIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVT 62
R A VGANL ++G LDP V E++L++ F G + V +D T
Sbjct: 92 RKANDVGANL--------------FIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDT 137
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ +GYGFV + E +D AI+ ++ L + I V A
Sbjct: 138 GMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYA 176
>gi|339244657|ref|XP_003378254.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972855|gb|EFV56501.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 432
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 155/208 (74%), Positives = 182/208 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT YVG LD +V+E +LWELFVQAGP+V+V++PKDR+++ HQGYGFVEF EEDA
Sbjct: 8 DRNQDATIYVGGLDERVSETILWELFVQAGPIVSVHMPKDRISSTHQGYGFVEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPIRVNKAS +K+LD+GAN+FIGNLDP+VDEKLLYDTFSAFGV++
Sbjct: 68 DYAIKIMNMIKLYGKPIRVNKASAHQKNLDIGANVFIGNLDPEVDEKLLYDTFSAFGVLL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRDP+TGNS+GF FI++ SFEASDAAIEAMNGQYLCNR I+ SYA+KKD KGERH
Sbjct: 128 QVPKIMRDPETGNSKGFAFINFASFEASDAAIEAMNGQYLCNRPISASYAFKKDAKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
GT AER+LAA NP RPH LFA P
Sbjct: 188 GTAAERLLAAQNPIFPADRPHQLFADAP 215
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRS 75
H + A ++GNLDP+V E+LL++ F G ++ V + +D T +G+ F+ F S
Sbjct: 92 HQKNLDIGANVFIGNLDPEVDEKLLYDTFSAFGVLLQVPKIMRDPETGNSKGFAFINFAS 151
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
E +D AI+ +N L +PI + A +D K
Sbjct: 152 FEASDAAIEAMNGQYLCNRPISASYAFKKDAK 183
>gi|325186713|emb|CCA21261.1| RNA polymerase Ispecific transcription initiation factor rrn3
putative [Albugo laibachii Nc14]
Length = 988
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/275 (61%), Positives = 201/275 (73%), Gaps = 29/275 (10%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y+GNLD +V+EELLWEL +QAG VVNV++P+D+VT HQ YGFVEFR+EE A
Sbjct: 712 QRNQDATIYIGNLDDKVSEELLWELMLQAGSVVNVHMPRDKVTTNHQNYGFVEFRTEECA 771
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YAIK++NMI++YGKPIRV KASQDKK+LD+GANLFIGNLDP+VDEKLLYDTFSAFG I+
Sbjct: 772 EYAIKIMNMIQVYGKPIRVKKASQDKKTLDIGANLFIGNLDPEVDEKLLYDTFSAFGGII 831
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRDPDT +SRGFGFIS+D+FEASD AIE MN QYLCNRQI V YA+KKD+ ERH
Sbjct: 832 ETPKIMRDPDTKHSRGFGFISFDAFEASDLAIECMNAQYLCNRQIVVQYAFKKDSNNERH 891
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQN-------------------APQANGTV 240
G+ AER+LA +NP+ K +PHT FA P N Q+N V
Sbjct: 892 GSQAERLLAQSNPN--KLKPHTRFAFAMPDGMNGMLGMQPPQHHMGYMTQPGTMQSNMGV 949
Query: 241 GGPV--PPRPYANGAASGPISAVR------PPPPP 267
G V PP P + A G + A + PPPPP
Sbjct: 950 MGMVPPPPTPMSVAAGYGGMQASQFAHNSIPPPPP 984
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 91 LYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
L K +++ S + + A ++IGNLD V E+LL++ G +V N + RD T
Sbjct: 696 LAAKQMQLTNMSAAIEQRNQDATIYIGNLDDKVSEELLWELMLQAGSVV-NVHMPRDKVT 754
Query: 151 GNSRGFGFISYDSFEASDAAIEAMN 175
N + +GF+ + + E ++ AI+ MN
Sbjct: 755 TNHQNYGFVEFRTEECAEYAIKIMN 779
>gi|340381114|ref|XP_003389066.1| PREDICTED: splicing factor 3B subunit 4-like [Amphimedon
queenslandica]
Length = 364
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 180/209 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V+E +LWELF+QAGPVVN+++P+DR+T HQGYGFVEF E+DA
Sbjct: 8 ERNQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPIRVNKA+ + KSLD+GANLFIGNLDP++DEK+LYD FSAFGVI+
Sbjct: 68 DYAIKIMNMIKLYGKPIRVNKAASNMKSLDIGANLFIGNLDPEIDEKMLYDIFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD D+G S+GF F+++ SF+ASDAAIEAMNGQYLCNRQ++VSYA+KK++KGERH
Sbjct: 128 QAPKIMRDVDSGGSKGFAFVNFASFDASDAAIEAMNGQYLCNRQVSVSYAFKKESKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPP 228
GT ER LA +P Q RPH LFA PP
Sbjct: 188 GTWEERYLAKQSPLLQTDRPHQLFADAPP 216
>gi|340382462|ref|XP_003389738.1| PREDICTED: hypothetical protein LOC100632716 [Amphimedon
queenslandica]
Length = 433
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 180/209 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V+E +LWELF+QAGPVVN+++P+DR+T HQGYGFVEF E+DA
Sbjct: 8 ERNQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPIRVNKA+ + KSLD+GANLFIGNLDP++DEK+LYD FSAFGVI+
Sbjct: 68 DYAIKIMNMIKLYGKPIRVNKAASNMKSLDIGANLFIGNLDPEIDEKMLYDIFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD D+G S+GF F+++ SF+ASDAAIEAMNGQYLCNRQ++VSYA+KK++KGERH
Sbjct: 128 QAPKIMRDVDSGGSKGFAFVNFASFDASDAAIEAMNGQYLCNRQVSVSYAFKKESKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPP 228
GT ER LA +P Q RPH LFA PP
Sbjct: 188 GTWEERYLAKQSPLLQTDRPHQLFADAPP 216
>gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster]
Length = 366
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/228 (69%), Positives = 182/228 (79%), Gaps = 19/228 (8%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPV-------------------VNVYVPKD 59
AERNQDAT Y G LD +V+E LLWELFVQAGPV VNV++PKD
Sbjct: 7 AERNQDATIYAGGLDDKVSETLLWELFVQAGPVGKSGHTCIVPSSSLIVMLAVNVHMPKD 66
Query: 60 RVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL 119
RVT +HQGYGFVEF SEEDADY IK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNL
Sbjct: 67 RVTQMHQGYGFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNL 126
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D +VDEKLLYDTFSAFGVI+ PKIMRDP+TG S+ F FI++ SFEASDAA++AMNGQYL
Sbjct: 127 DVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYL 186
Query: 180 CNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGP 227
CNR I+VSYA+KKD KGERHG+ AER+LAA NPS+ RPH LFA P
Sbjct: 187 CNRPISVSYAFKKDHKGERHGSAAERLLAAQNPSTHADRPHQLFADAP 234
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLD +V E+LL++ F G ++ + +D T +
Sbjct: 103 IRVNKASAHQKNLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKS 162
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ F+ F S E +D A+ +N L +PI V+ A +D K
Sbjct: 163 FAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKKDHK 202
>gi|340723814|ref|XP_003400283.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus terrestris]
Length = 413
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 177/205 (86%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQ + +VTE L+WELFVQ+GPVVNV++PKDRVT +HQGYGFVEF EED
Sbjct: 7 AERNQGTCLFXXXXXDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK++NMIKLYGKPIRVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDP+TGNS+GF FI++ SF+ASDA+IEAMNGQYLCNR I+VSYA+K+D KGER
Sbjct: 127 LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYAFKRDAKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLF 223
HG+ AER+LAA NP SQ RPH LF
Sbjct: 187 HGSAAERLLAAQNPLSQADRPHQLF 211
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H + A ++GNLDP+V E+LL++ F G ++ + +D T +G
Sbjct: 84 IRVNKASAHQKNLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S + +D +I+ +N L +PI V+ A
Sbjct: 144 FAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 182/207 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +VT+ +LWELFVQAGPVV+V +PKDRVT+ HQG+GF+EF EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLL+DTFSAFGVI+
Sbjct: 68 DYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGANVFVGNLDPEVDEKLLFDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD +TGNS+GF F+++ SFEASD+AIEAMNGQ+LCNR ITVSYA+KKDTKGERH
Sbjct: 128 QVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFKKDTKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASG 226
GT AER+LAA NP +P+ +F+ G
Sbjct: 188 GTAAERMLAAQNPLFPSDKPNQIFSDG 214
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 182/207 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +VT+ +LWELFVQAGPVV+V +PKDRVT+ HQG+GF+EF EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLL+DTFSAFGVI+
Sbjct: 68 DYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGANVFVGNLDPEVDEKLLFDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD +TGNS+GF F+++ SFEASD+AIEAMNGQ+LCNR ITVSYA+KKDTKGERH
Sbjct: 128 QVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFKKDTKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASG 226
GT AER+LAA NP +P+ +F+ G
Sbjct: 188 GTAAERMLAAQNPLFPSDKPNQIFSDG 214
>gi|47229364|emb|CAF99352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/239 (67%), Positives = 183/239 (76%), Gaps = 34/239 (14%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQ------------ 66
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQ
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGEQLFHTDNTED 66
Query: 67 ----------------------GYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD 104
GYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS
Sbjct: 67 ACVRFQKRLLYVNETNVHILFSGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAH 126
Query: 105 KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSF 164
K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+G+ FI++ SF
Sbjct: 127 NKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASF 186
Query: 165 EASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLF 223
+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP SQ RPH LF
Sbjct: 187 DASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLF 245
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 118 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 177
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 178 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 217
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 181/207 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +VT+ +LWELFVQAGPVV+V +PKDRVT+ HQG+GF+EF EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLL+DTFSAFGVI+
Sbjct: 68 DYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGANVFVGNLDPEVDEKLLFDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD +TG S+GF F+++ SFEASD+AIEAMNGQ+LCNR ITVSYA+KKDTKGERH
Sbjct: 128 QVPKIMRDAETGXSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFKKDTKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASG 226
GT AER+LAA NP +P+ +F+ G
Sbjct: 188 GTAAERMLAAQNPLFPSDKPNQIFSDG 214
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 181/208 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +VT+ +LWELFVQ+GPVV+V +PKDRVTN HQG+GFVEF EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK++NMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLL+DTFSAFGVI+
Sbjct: 68 DYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLFDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD +TGNS+GF F+++ SFEASD+AIEAM+GQ+LCNR ITVSYA+KKD KGERH
Sbjct: 128 QVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMSGQFLCNRAITVSYAFKKDAKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
GT AER+LAA NP +P+ +F+ G
Sbjct: 188 GTAAERMLAAQNPLFPSDKPNQMFSDGK 215
>gi|115532084|ref|NP_001021932.1| Protein SAP-49 [Caenorhabditis elegans]
gi|55977846|sp|Q09442.2|SF3B4_CAEEL RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Spliceosome-associated protein 49
gi|50511896|emb|CAB60993.2| Protein SAP-49 [Caenorhabditis elegans]
Length = 388
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 179/208 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V+E +LWEL VQAGPVV+V +PKDRVT HQG+GFVEF EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK+LNMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68 DYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERH
Sbjct: 128 QVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
GT AER+LAA NP K RPH +F+ P
Sbjct: 188 GTAAERMLAAQNPLFPKDRPHQVFSDVP 215
>gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein [Caenorhabditis elegans]
Length = 398
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 179/208 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V+E +LWEL VQAGPVV+V +PKDRVT HQG+GFVEF EEDA
Sbjct: 18 ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 77
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK+LNMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 78 DYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 137
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERH
Sbjct: 138 QVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERH 197
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
GT AER+LAA NP K RPH +F+ P
Sbjct: 198 GTAAERMLAAQNPLFPKDRPHQVFSDVP 225
>gi|308510552|ref|XP_003117459.1| CRE-SAP-49 protein [Caenorhabditis remanei]
gi|308242373|gb|EFO86325.1| CRE-SAP-49 protein [Caenorhabditis remanei]
Length = 389
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 179/208 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V+E +LWEL VQAGPVV+V +PKDRVT HQG+GFVEF EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK+LNMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68 DYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERH
Sbjct: 128 QVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
GT AER+LAA NP K RPH +F+ P
Sbjct: 188 GTAAERMLAAQNPLFPKDRPHQVFSDVP 215
>gi|341882220|gb|EGT38155.1| hypothetical protein CAEBREN_32522 [Caenorhabditis brenneri]
gi|341882722|gb|EGT38657.1| hypothetical protein CAEBREN_06124 [Caenorhabditis brenneri]
Length = 388
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 178/208 (85%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V+E +LWEL VQAGPVV+V +PKDRVT HQG+GFVEF EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK+LNMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68 DYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERH
Sbjct: 128 QVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
GT AER+LAA NP K RPH F+ P
Sbjct: 188 GTAAERMLAAQNPLFPKDRPHQQFSDVP 215
>gi|357612263|gb|EHJ67888.1| spliceosomal protein on the X [Danaus plexippus]
Length = 259
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 168/187 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQDAT YVG LD +VTE LLWELFVQAGPVVNV++PKDRVT HQGYGFVEF EED
Sbjct: 7 AERNQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIKV+NMIKLYGKP+RVNKAS +K+LDVGAN+FIGNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKVMNMIKLYGKPVRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PK+MRDP+TGNS+ F FI++ SFEASDAAIEAMN QYLCNR I+VSYA+KKD KGER
Sbjct: 127 LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGER 186
Query: 199 HGTPAER 205
HG+ AER
Sbjct: 187 HGSAAER 193
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
V N H + A ++GNLDP+V E+LL++ F G ++ V +D T +
Sbjct: 84 VRVNKASAHQKNLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKA 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ F S E +D AI+ +N L +PI V+ A
Sbjct: 144 FAFINFASFEASDAAIEAMNNQYLCNRPISVSYA 177
>gi|326430602|gb|EGD76172.1| splicing factor 3b [Salpingoeca sp. ATCC 50818]
Length = 256
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 191/262 (72%), Gaps = 29/262 (11%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD + TE LLWELF QAGPVV+V++PKDRVT LHQGYGFVEF EEDA
Sbjct: 7 ERNQDATVYVGGLDDRATESLLWELFQQAGPVVSVHMPKDRVTGLHQGYGFVEFLGEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+K++NMI LYGKPIRVNKA+ ++ DVGANL+IGNLDP VDEKLLYDTFSAFGVI+
Sbjct: 67 EYALKIMNMINLYGKPIRVNKAASHTRTQDVGANLYIGNLDPSVDEKLLYDTFSAFGVIL 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+PKIMRDPDTG S+G+ F++Y +FEASDAAI+AMNGQYLCNR I V+YA+KKDTKGERH
Sbjct: 127 QHPKIMRDPDTGASKGYAFVNYANFEASDAAIKAMNGQYLCNRNINVTYAFKKDTKGERH 186
Query: 200 GTPAERILAANNPSSQKS-RPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPI 258
G+ AER+LAA P + +PH FA P + AP
Sbjct: 187 GSAAERLLAAQKPVIKTDQKPHQYFAEKPNA---AP------------------------ 219
Query: 259 SAVRPPPPPPQAAAFPPMQVAG 280
+P PPP QA +F P + G
Sbjct: 220 -TFQPGPPPAQAVSFQPHEWIG 240
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ ++ A Y+GNLDP V E+LL++ F G ++ + +D T +G
Sbjct: 83 IRVNKAASHTRTQDVGANLYIGNLDPSVDEKLLYDTFSAFGVILQHPKIMRDPDTGASKG 142
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y FV + + E +D AIK +N L + I V A
Sbjct: 143 YAFVNYANFEASDAAIKAMNGQYLCNRNINVTYA 176
>gi|268529722|ref|XP_002629987.1| C. briggsae CBR-SAP-49 protein [Caenorhabditis briggsae]
Length = 370
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 177/209 (84%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
ERNQDAT YVG LD +V+E +LWEL VQAGPVV+V +PKDRVT HQG+GFVEF EED
Sbjct: 7 VERNQDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK+LNMIKLYGKPI+VNKAS +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI
Sbjct: 67 ADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRD D+G S+GF FI++ SFEASD +EAM GQ+LCNR ITVSYA+K+D+KGER
Sbjct: 127 LQVPKIMRDVDSGTSKGFAFINFASFEASDRGLEAMRGQFLCNRAITVSYAFKRDSKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGP 227
HGT AER+LA+ NP K RPH +F+ P
Sbjct: 187 HGTAAERMLASQNPLFPKDRPHQVFSDVP 215
>gi|320164028|gb|EFW40927.1| splicing factor 3B subunit 4 [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 177/204 (86%), Gaps = 1/204 (0%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
RNQDAT YVGNLD +V + LLWELF+QAGPV +V++PKDRV+ L QGYGFVE+ +EEDA+
Sbjct: 8 RNQDATCYVGNLDDRVNDRLLWELFLQAGPVAHVFIPKDRVSGLQQGYGFVEYPTEEDAE 67
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
YA K+LNMIKL+GKPIRV++ S D+K +D+GANLFIGNLD +VDEK+L+DTFSAFGVI+
Sbjct: 68 YATKILNMIKLFGKPIRVSR-STDRKDIDIGANLFIGNLDTEVDEKMLFDTFSAFGVILH 126
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
PKIMRD GN RGFGF+++ SFEASDAAIEAMNGQYLCNRQI+V+YA+KKD KGERHG
Sbjct: 127 TPKIMRDQQNGNPRGFGFVNFASFEASDAAIEAMNGQYLCNRQISVTYAFKKDMKGERHG 186
Query: 201 TPAERILAANNPSSQKSRPHTLFA 224
T AER+LAA+NP S S+PH FA
Sbjct: 187 TAAERLLAASNPFSNVSKPHQRFA 210
>gi|395535971|ref|XP_003769994.1| PREDICTED: splicing factor 3B subunit 4 [Sarcophilus harrisii]
Length = 462
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 148/189 (78%), Positives = 169/189 (89%)
Query: 35 QVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGK 94
+V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEEDADYAIK++NMIKLYGK
Sbjct: 61 KVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGK 120
Query: 95 PIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSR 154
PIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+
Sbjct: 121 PIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSK 180
Query: 155 GFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSS 214
G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ ER+LAA NP S
Sbjct: 181 GYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAPERLLAAQNPLS 240
Query: 215 QKSRPHTLF 223
Q RPH LF
Sbjct: 241 QADRPHQLF 249
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 122 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 181
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 182 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 221
>gi|256083494|ref|XP_002577978.1| splicing factor 3b subunit 4 (fragment) [Schistosoma mansoni]
gi|350645079|emb|CCD60205.1| splicing factor 3b, subunit 4 (fragment),putative [Schistosoma
mansoni]
Length = 344
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/245 (60%), Positives = 179/245 (73%), Gaps = 45/245 (18%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V E +LWELF+QAGPVVNV++PKDR+ HQGYGFVEF +EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA++++NMIKLYGKPIRVNKAS ++K+LD+GAN+FIGNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68 DYAMRIMNMIKLYGKPIRVNKASANQKNLDIGANIFIGNLDPEVDEKLLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRDP+TGNS+G+ FI++ SFEASDAAIEAMNGQYLCNR IT+SYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPETGNSKGYAFINFASFEASDAAIEAMNGQYLCNRAITISYAFKKDSKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPIS 259
G+ AER+LAA + P+S
Sbjct: 188 GSAAERLLAAQS---------------------------------------------PLS 202
Query: 260 AVRPP 264
P
Sbjct: 203 QAERP 207
>gi|422295420|gb|EKU22719.1| splicing factor 3B subunit 4 [Nannochloropsis gaditana CCMP526]
Length = 274
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 177/211 (83%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y G LD +VTE+LLWEL GPVV+V++P+D+VT +HQ +GFVEFRSEEDA
Sbjct: 8 QRNQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+K++NM+++YGKP+RVNKASQD+K++DVGANLFIGNL +VDEK LYDTFSAFG I
Sbjct: 68 DYAVKIMNMVRMYGKPLRVNKASQDRKTVDVGANLFIGNLAAEVDEKDLYDTFSAFGGIT 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PK+M DPDTG+++GFGF+S+DSFEA+D AIE MNG YL R I V YAYKKD+KGERH
Sbjct: 128 QPPKVMFDPDTGHTKGFGFVSFDSFEAADYAIECMNGAYLGGRPICVQYAYKKDSKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSL 230
G+ AER+LAA+N + + + HTLFA+GP +
Sbjct: 188 GSQAERLLAASNQQAVRFKAHTLFATGPGQI 218
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 138/193 (71%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT Y+GNLD QV ++LLWELFVQ GPV V VP+D++T HQGYGFVEFR+E DA
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDA 83
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+K++NM+KLYGK +R+NK++QD+++ DVGAN+F+GNLDPDVDEK +YDTFSAFG I+
Sbjct: 84 DYALKLMNMVKLYGKALRLNKSAQDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAFGNII 143
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ KIMRDP+TG SRGFGF+S+D+FEASDAA+ AMNGQ++CNR I VSYAYKKDT+GERH
Sbjct: 144 S-AKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGERH 202
Query: 200 GTPAERILAANNP 212
G+ AER+LAAN P
Sbjct: 203 GSAAERLLAANRP 215
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 138/193 (71%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT Y+GNLD QV ++LLWELFVQ GPV V VP+D++T HQGYGFVEFR+E DA
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDA 83
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+K++NM+KLYGK +R+NK++QD+++ DVGAN+F+GNLDPDVDEK +YDTFSAFG I+
Sbjct: 84 DYALKLMNMVKLYGKALRLNKSAQDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAFGNII 143
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ KIMRDP+TG SRGFGF+S+D+FEASDAA+ AMNGQ++CNR I VSYAYKKDT+GERH
Sbjct: 144 S-AKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGERH 202
Query: 200 GTPAERILAANNP 212
G+ AER+LAAN P
Sbjct: 203 GSAAERLLAANRP 215
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 138/193 (71%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT Y+GNLD QV ++LLWELFVQ GPV V VP+D++T HQGYGFVEFR+E DA
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDA 83
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+K++NM+KLYGK +R+NK++QD+++ DVGAN+F+GNLDPDVDEK +YDTFSAFG I+
Sbjct: 84 DYALKLMNMVKLYGKALRLNKSAQDRRNFDVGANVFLGNLDPDVDEKTIYDTFSAFGNII 143
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ KIMRDP+TG SRGFGF+S+D+FEASDAA+ AMNGQ++CNR I VSYAYKKDT+GERH
Sbjct: 144 S-AKIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGERH 202
Query: 200 GTPAERILAANNP 212
G+ AER+LAAN P
Sbjct: 203 GSAAERLLAANRP 215
>gi|384500250|gb|EIE90741.1| hypothetical protein RO3G_15452 [Rhizopus delemar RA 99-880]
Length = 246
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 181/209 (86%), Gaps = 1/209 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT YVGNLD + TE L+WEL +QAGPVVNV++PKDRVT HQ YGFVEF +EEDA
Sbjct: 6 ERNQEATVYVGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA++V+N ++LYGKP+RVNKA+ D+K+LDVGA LFIGNLDP+VDEKLLYDTFSAFG+IV
Sbjct: 66 DYAMRVMNQVRLYGKPVRVNKATSDRKNLDVGATLFIGNLDPEVDEKLLYDTFSAFGLIV 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
P++ RDPDTG +GFGFIS+D+FE+SDAAIEAM+GQYL N+QIT+SYAYKKD KGERH
Sbjct: 126 NTPRVSRDPDTGALKGFGFISFDNFESSDAAIEAMDGQYLMNKQITISYAYKKDGKGERH 185
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPP 228
G+ AER+LAA + + P+ L+ASGPP
Sbjct: 186 GSAAERLLAAEARKNVQ-MPNQLYASGPP 213
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 137/193 (70%), Positives = 169/193 (87%), Gaps = 1/193 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT Y+GNLD QV ++LLWELFVQ GPV V VP+D++T HQGYGFVEF +E DA
Sbjct: 24 ERNQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDA 83
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+K++NM+KLYGK +R+NK++QD+++ DVGAN+F+GNLDPDVDEK +YDTFS FG I+
Sbjct: 84 DYALKLMNMVKLYGKSLRLNKSAQDRRNFDVGANIFLGNLDPDVDEKTIYDTFSTFGNIL 143
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KIMRDP+TG SRGFGF+S+D+FEASDAA+ AMNGQ++CNR I VSYAYKKDT+GERH
Sbjct: 144 T-AKIMRDPETGISRGFGFVSFDTFEASDAALAAMNGQFICNRPIHVSYAYKKDTRGERH 202
Query: 200 GTPAERILAANNP 212
G+ AER+LAAN P
Sbjct: 203 GSAAERLLAANRP 215
>gi|449281849|gb|EMC88820.1| Splicing factor 3B subunit 4, partial [Columba livia]
Length = 177
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 142/177 (80%), Positives = 161/177 (90%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
DAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEEDADYAI
Sbjct: 1 DATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAI 60
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
K++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+ PK
Sbjct: 61 KIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPK 120
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
IMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG
Sbjct: 121 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHG 177
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRS 75
H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +GY F+ F S
Sbjct: 81 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFAS 140
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA 101
+ +D AI+ +N L +PI V+ A
Sbjct: 141 FDASDAAIEAMNGQYLCNRPITVSYA 166
>gi|384494999|gb|EIE85490.1| hypothetical protein RO3G_10200 [Rhizopus delemar RA 99-880]
Length = 246
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 175/208 (84%), Gaps = 1/208 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT Y+GNLD + TE L+WEL +QAGPVVNV++PKDRVT HQ YGFVEF +EEDA
Sbjct: 6 ERNQEATVYIGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+K++N ++LYGKP+RVNKA+ D+K+LDVGA LFIGNLDP+VDEK+LYDTFSAFG+IV
Sbjct: 66 DYAMKIMNQVRLYGKPVRVNKATSDRKNLDVGATLFIGNLDPEVDEKILYDTFSAFGLIV 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
P+I RDPDTG +GFGFISYD+FE+SDAAIEAM+GQYL N+QITVSYA+KKD KGERH
Sbjct: 126 NTPRISRDPDTGALKGFGFISYDNFESSDAAIEAMDGQYLMNKQITVSYAFKKDGKGERH 185
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
G+ AER L A P+ LFA GP
Sbjct: 186 GSAAER-LLAAEARKHTQMPNRLFAGGP 212
>gi|452820612|gb|EME27652.1| splicing factor 3B subunit 4 [Galdieria sulphuraria]
Length = 265
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 175/214 (81%), Gaps = 4/214 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERNQ+AT YVGNLD +V+EELLWEL VQ GPV +VY+P+DR+T QGYGFVEF++E D
Sbjct: 17 AERNQEATLYVGNLDERVSEELLWELMVQVGPVKHVYIPRDRITGQTQGYGFVEFKNEMD 76
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
A YA KVLNM+++Y KP+R+ +AS DK+S+D+GANLF+GNL +VDEKLLYDTFSAFG I
Sbjct: 77 AIYATKVLNMVRVYAKPLRLQQASTDKRSMDIGANLFVGNLSQEVDEKLLYDTFSAFGAI 136
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P IMRDP+TG S+G+GFI +DSFEASDAAIE MNGQ+L N Q+TV YA+KKDTK ER
Sbjct: 137 IETPHIMRDPETGESKGYGFIKFDSFEASDAAIETMNGQFLGNNQVTVQYAFKKDTK-ER 195
Query: 199 HGTPAERILAANNPSSQKS---RPHTLFASGPPS 229
HG+ AERILAA + + RPH++F+ GP +
Sbjct: 196 HGSQAERILAARARAVSANALLRPHSMFSLGPQA 229
>gi|390598508|gb|EIN07906.1| hypothetical protein PUNSTDRAFT_88604 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 343
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 176/217 (81%), Gaps = 6/217 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMIQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE++LYDTFSAFGVI
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERVLYDTFSAFGVIS 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP TG S+G+GF+SY FE+SDAAIE+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPSTGQSKGYGFVSYTDFESSDAAIESMNGQFLMNKPITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA----NN--PSSQKSRPHTLFASGPPSL 230
GTPAER+LAA NN P + ++ +FA+G P
Sbjct: 187 GTPAERLLAAQARKNNALPVAARTAAPGMFAAGRPGF 223
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 134/198 (67%), Positives = 175/198 (88%), Gaps = 1/198 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT Y+GNLD +VT++++WELF+Q GPVVNV++PKD+++ HQGYGFVEF+SEEDA
Sbjct: 14 ERNQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDA 73
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK+++MIKLYGKPI+VNKASQDK++ +VGANLFIGNLD ++DEK LY+TFSAFG I+
Sbjct: 74 DYAIKIMHMIKLYGKPIKVNKASQDKRTQEVGANLFIGNLDTEIDEKTLYETFSAFGHIL 133
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ KIMR+P+TG S+G+GF+SYD+FE+SD A+ AMNGQ+L + I V YA+KKD KGERH
Sbjct: 134 S-TKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVEYAFKKDAKGERH 192
Query: 200 GTPAERILAANNPSSQKS 217
G+ AER+LAAN P +QK+
Sbjct: 193 GSQAERLLAANRPLAQKA 210
>gi|167533335|ref|XP_001748347.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773159|gb|EDQ86802.1| predicted protein [Monosiga brevicollis MX1]
Length = 406
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 136/193 (70%), Positives = 169/193 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V EEL+WELF+QAGPVV+V++PKDRV+ HQ YGFVEF E+DA
Sbjct: 8 ERNQDATVYVGGLDDKVDEELVWELFLQAGPVVSVHMPKDRVSGAHQSYGFVEFLGEDDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+K+LNMI +YGKPIRVNK++ K ++VGANL+IGNL P+VDEKLL+DTFSAFGVI+
Sbjct: 68 EYALKILNMINVYGKPIRVNKSASHSKHMEVGANLYIGNLAPEVDEKLLFDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+PK+MRD +TG+S+GF FI+Y +FEASDAAI+AM+ QYLCNR I V+YAYKKDT+GERH
Sbjct: 128 QHPKVMRDLETGHSKGFAFINYATFEASDAAIKAMHQQYLCNRPINVTYAYKKDTQGERH 187
Query: 200 GTPAERILAANNP 212
G+ AER+LAA NP
Sbjct: 188 GSQAERMLAAQNP 200
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N HS A Y+GNL P+V E+LL++ F G ++ V +D T +G
Sbjct: 84 IRVNKSASHSKHMEVGANLYIGNLAPEVDEKLLFDTFSAFGVILQHPKVMRDLETGHSKG 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ F+ + + E +D AIK ++ L +PI V A
Sbjct: 144 FAFINYATFEASDAAIKAMHQQYLCNRPINVTYA 177
>gi|449543395|gb|EMD34371.1| hypothetical protein CERSUDRAFT_140831 [Ceriporiopsis subvermispora
B]
Length = 323
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 134/190 (70%), Positives = 164/190 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + ++ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCSDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFGV+
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP TG S+G+GF+SY FE+SDAA+E+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPSTGKSKGYGFVSYTDFESSDAAVESMNGQFLMNKAITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 187 GTPAERLLAA 196
>gi|342320413|gb|EGU12353.1| Splicing factor 3b subunit 4 [Rhodotorula glutinis ATCC 204091]
Length = 317
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 134/190 (70%), Positives = 166/190 (87%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y+GNLD +VT+ L+WEL +QAGPV NV++PKDR++ HQGYGF EF +EEDA
Sbjct: 8 QRNQDATCYLGNLDERVTDALVWELMLQAGPVANVHLPKDRISMTHQGYGFCEFLTEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS D+K LD+GANLFIGNLDP++DE++LYDTF+AFG +V
Sbjct: 68 EYACKIMNQIKLFGKPIRVNKASSDRKQLDIGANLFIGNLDPNIDERMLYDTFTAFGTLV 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
KI RD TG S+GFGF+SYDSFEA+DAAIE+MNGQ+L N+ +TVSYA+KKD KGERH
Sbjct: 128 QPAKISRDVGTGASKGFGFVSYDSFEAADAAIESMNGQFLMNKPVTVSYAFKKDGKGERH 187
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 188 GTPAERLLAA 197
>gi|395330318|gb|EJF62702.1| hypothetical protein DICSQDRAFT_104224 [Dichomitus squalens
LYAD-421 SS1]
Length = 344
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 164/190 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFG++
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGMMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP TG S+G+GF+SY FE+SDAAIE+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPQTGKSKGYGFVSYTDFESSDAAIESMNGQFLMNKAITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 187 GTPAERLLAA 196
>gi|392567732|gb|EIW60907.1| hypothetical protein TRAVEDRAFT_146596 [Trametes versicolor
FP-101664 SS1]
Length = 337
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 133/190 (70%), Positives = 164/190 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + ++ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCSDALIWELMLQAGPVVNVHLPKDRISMTHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFG++
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGMMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP +G S+G+GF+SY FE+SDAAIE+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPTSGKSKGYGFVSYTDFESSDAAIESMNGQFLMNKAITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 187 GTPAERLLAA 196
>gi|389749090|gb|EIM90267.1| hypothetical protein STEHIDRAFT_93143 [Stereum hirsutum FP-91666
SS1]
Length = 338
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 133/190 (70%), Positives = 164/190 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +E+DA
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEDDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFGV+
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP TG S+G+GF++Y FE+SDAA+E+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPQTGQSKGYGFVAYTDFESSDAAVESMNGQFLMNKAITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 187 GTPAERLLAA 196
>gi|302693156|ref|XP_003036257.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune H4-8]
gi|300109953|gb|EFJ01355.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune H4-8]
Length = 329
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 134/190 (70%), Positives = 164/190 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD +VT+ ++WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 8 DRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRISMSHQGYGFCEFLTEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFG++
Sbjct: 68 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGMMA 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T K+ RDP TG S+G+GF+S+ FEASDAAIEAMNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 128 TTAKVARDPGTGTSKGYGFVSFTDFEASDAAIEAMNGQFLMNKAITVQYAFKKDGKGERH 187
Query: 200 GTPAERILAA 209
GT AER+LAA
Sbjct: 188 GTSAERLLAA 197
>gi|409046552|gb|EKM56032.1| hypothetical protein PHACADRAFT_145047 [Phanerochaete carnosa
HHB-10118-sp]
Length = 322
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 164/190 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFGV+
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP +G S+G+GF+SY FE+SDAAIE+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPQSGQSKGYGFVSYTDFESSDAAIESMNGQFLMNKPITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 187 GTPAERLLAA 196
>gi|403417817|emb|CCM04517.1| predicted protein [Fibroporia radiculosa]
Length = 325
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 133/190 (70%), Positives = 164/190 (86%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + ++ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCSDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFGV+
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP +G S+G+GF+S+ FE+SDAAIE+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPGSGKSKGYGFVSFTDFESSDAAIESMNGQFLMNKAITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 187 GTPAERLLAA 196
>gi|413934108|gb|AFW68659.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 270
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/249 (70%), Positives = 189/249 (75%), Gaps = 12/249 (4%)
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD
Sbjct: 1 MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 60
Query: 148 PDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERIL 207
P+TGNSRGFGF+SY+SFE+SD AIEAMN Q+LCNR ITVSYAYKKDTKGERHGTPAER+L
Sbjct: 61 PETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLL 120
Query: 208 AANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPP 267
AANNP SQK+RPHT+FASGPP+ Q P GGP PRPY NG G I +R PPPP
Sbjct: 121 AANNPGSQKNRPHTMFASGPPT-QGHPN-----GGPPVPRPYGNGTIPGQIQHIRQPPPP 174
Query: 268 PQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRP 327
P PPMQ+ GQ W Q +P P MP +Q+R P PPP M RP
Sbjct: 175 PVGQFPPPMQMHGQPTWPAQ-----HSMPPP-MPSQLQYRLPMRPPPPNMMPPPVGMVRP 228
Query: 328 PPQPMGMGA 336
PP P GM A
Sbjct: 229 PPPPTGMSA 237
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVV-NVYVPKDRVTNLHQG 67
+ N Q + A ++GNLDP V E+LL++ F G +V N + +D T +G
Sbjct: 9 IRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRG 68
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+GFV + S E +D AI+ +N L +PI V+ A
Sbjct: 69 FGFVSYESFESSDQAIEAMNNQHLCNRPITVSYA 102
>gi|328767802|gb|EGF77850.1| hypothetical protein BATDEDRAFT_33617 [Batrachochytrium
dendrobatidis JAM81]
Length = 308
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 172/208 (82%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RN++A+ YVGN++ + T+ L+WELF+QAGPVVNVY+PKDRVT +HQGYGFVEF +E+DA
Sbjct: 6 DRNKEASVYVGNIEDRATDSLIWELFLQAGPVVNVYLPKDRVTQMHQGYGFVEFMTEQDA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA KV+NM++LYGKP+RVNKA+ DK +LDVGA LFI NLD VDEK LYDTFSAFG+I
Sbjct: 66 EYASKVMNMVRLYGKPLRVNKATSDKMALDVGATLFISNLDMTVDEKALYDTFSAFGMIA 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ PKI R+P+TG S+G+GF+S+ +FEASDAAIEAMNGQ+L NR I VSYA KKD KGERH
Sbjct: 126 STPKISRNPETGESKGYGFVSFSTFEASDAAIEAMNGQFLANRAIAVSYALKKDGKGERH 185
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGP 227
G+ AER+LAA + + P+ FA P
Sbjct: 186 GSAAERLLAAQSGKTTALVPNQNFADIP 213
>gi|336367930|gb|EGN96274.1| hypothetical protein SERLA73DRAFT_185935 [Serpula lacrymans var.
lacrymans S7.3]
Length = 319
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 133/190 (70%), Positives = 161/190 (84%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFGV+
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP TG S+G+GF SY FE+SDAA E+MNGQ+L N+ I+V YA+KKD KGERH
Sbjct: 127 TTAKIARDPGTGKSKGYGFASYTDFESSDAATESMNGQFLMNKAISVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GT AER+LAA
Sbjct: 187 GTSAERLLAA 196
>gi|399218847|emb|CCF75734.1| unnamed protein product [Babesia microti strain RI]
Length = 237
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 137/201 (68%), Positives = 169/201 (84%), Gaps = 8/201 (3%)
Query: 20 ERNQDATAYVG-------NLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
ERNQ+AT Y+G NLDPQV EE+LWELF Q G V NV++P+D+VTN HQGYGFVE
Sbjct: 13 ERNQEATLYIGTKSVDSGNLDPQVDEEILWELFTQVGIVRNVHIPRDKVTNQHQGYGFVE 72
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
F +E +ADYA KV+N +K+Y KPIR NKASQDK++ ++GANLFIGNLDPDVDEKLLYDTF
Sbjct: 73 FDNETEADYAQKVMNALKVYHKPIRCNKASQDKRTYEIGANLFIGNLDPDVDEKLLYDTF 132
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
SAFG++++ KI+R+ +TG +GFGF+S+DSF++SDAA+ +MNGQYLCNR I VSYAYKK
Sbjct: 133 SAFGLVLS-TKIVREEETGLGKGFGFVSFDSFDSSDAALASMNGQYLCNRPIQVSYAYKK 191
Query: 193 DTKGERHGTPAERILAANNPS 213
DT GERHG+ AER+LAAN PS
Sbjct: 192 DTTGERHGSAAERLLAANRPS 212
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta CCMP2712]
Length = 209
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/193 (72%), Positives = 166/193 (86%), Gaps = 3/193 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
QH ERNQDAT YVGN+ + TEE+LWELF+QAGPVVNV++P+D+VT +H G+GFVEFRS
Sbjct: 6 QHVPERNQDATIYVGNITEKCTEEILWELFLQAGPVVNVHIPRDKVTTVHSGFGFVEFRS 65
Query: 76 EEDADYAIKVLNMIKLYGKPIRVN-KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSA 134
EEDA+YAIK++NMIKL+G+P+R+N KAS + K LDVGANLFIGNL+P+VDEKLLYDTFSA
Sbjct: 66 EEDAEYAIKIMNMIKLHGQPLRLNKKASGEIKVLDVGANLFIGNLEPEVDEKLLYDTFSA 125
Query: 135 FGVIVTN-PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FGVIV N PK MRDP+TG S+GF F++YD FEA+D AIEAMNGQYLC R I+V YAYKKD
Sbjct: 126 FGVIVGNTPKCMRDPETGQSKGFAFVNYDCFEAADMAIEAMNGQYLCGRPISVQYAYKKD 185
Query: 194 -TKGERHGTPAER 205
+KGERHG R
Sbjct: 186 GSKGERHGRWERR 198
>gi|351714226|gb|EHB17145.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 297
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 171/214 (79%), Gaps = 15/214 (7%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QA PVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQARPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADY IK++NMIKLYGKPIRVNKAS K+LD+GAN+FIGNLDP++DEKLLYDTFS FGVI
Sbjct: 67 ADYDIKIMNMIKLYGKPIRVNKASAHNKNLDIGANIFIGNLDPEIDEKLLYDTFSTFGVI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PKIMRDPDTGNS+ + FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+K
Sbjct: 127 LQTPKIMRDPDTGNSKSYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK--- 183
Query: 199 HGTPAERILAANNPSS-----QKSRPHTLFASGP 227
+LA++ P S + ++ASGP
Sbjct: 184 -------VLASDVPDSTPGFPTLTEATAIWASGP 210
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +
Sbjct: 84 IRVNKASAHNKNLDIGANIFIGNLDPEIDEKLLYDTFSTFGVILQTPKIMRDPDTGNSKS 143
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSL 108
Y F+ F S + +D AI+ +N L +PI V+ A +D K L
Sbjct: 144 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKVL 185
>gi|170093944|ref|XP_001878193.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646647|gb|EDR10892.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 302
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 162/190 (85%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF E +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCELLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFG++
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGIMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RD +G S+G+GF+SY FE+SDAA+E+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDTGSGTSKGYGFVSYTDFESSDAAVESMNGQFLMNKAITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 187 GTPAERLLAA 196
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 169/194 (87%), Gaps = 1/194 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT YVGNLD +V EEL+WELF+Q G +VNV++P+D+VTN H GYGFVEF++EEDA
Sbjct: 15 ERNQEATLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDA 74
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAIK+++M+KL+GKPI+VNKASQDK++ +VGAN+F+GNL DVDEK+L D FS+FG+++
Sbjct: 75 DYAIKIMHMVKLFGKPIKVNKASQDKRTQEVGANVFVGNLHEDVDEKMLRDVFSSFGIVL 134
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ KIMRDP+T S+ +GF+SYD+FE+SDA+I+AMNGQYLC + I VSYAYKKD GE+H
Sbjct: 135 S-TKIMRDPETQVSKRYGFVSYDNFESSDASIQAMNGQYLCGKPIDVSYAYKKDAIGEKH 193
Query: 200 GTPAERILAANNPS 213
GT AER+LA N P+
Sbjct: 194 GTLAERVLAFNKPN 207
>gi|429327508|gb|AFZ79268.1| spliceosome associated protein, putative [Babesia equi]
Length = 311
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 131/202 (64%), Positives = 170/202 (84%), Gaps = 1/202 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT YVGN+D QV EELLWELF+QAG V N+++P+D+VT HQGYGFVEF +E+DA
Sbjct: 13 DRNQEATLYVGNVDMQVDEELLWELFIQAGVVKNIHIPRDKVTGQHQGYGFVEFETEDDA 72
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+++LN +KLY KP+R+NKAS+DK++++VGANLFIGN+D +VDEKLL+DTFSAFG ++
Sbjct: 73 DYAVRILNFVKLYNKPLRLNKASRDKENIEVGANLFIGNVDEEVDEKLLHDTFSAFGNVL 132
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
KI+RD D+ + F+SYDSFEASDAA+ AMNGQ+LCN+ I VSYAYKKDTKGERH
Sbjct: 133 LT-KIVRDIDSAGRNAYAFVSYDSFEASDAALAAMNGQFLCNKPIHVSYAYKKDTKGERH 191
Query: 200 GTPAERILAANNPSSQKSRPHT 221
G+ AER++AAN P+ S+ T
Sbjct: 192 GSAAERLIAANRPADATSQTGT 213
>gi|294925596|ref|XP_002778960.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239887806|gb|EER10755.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 388
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 138/197 (70%), Positives = 163/197 (82%), Gaps = 2/197 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN DAT YVGNLD +V EELLWELF+Q GP+ NV +P+DR+ HQGYGFVEF++ +DA
Sbjct: 17 ERNPDATIYVGNLDTKVDEELLWELFIQCGPIQNVSLPRDRIIGSHQGYGFVEFKNPDDA 76
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLD-VGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA+K++N+ KL+ KPIR NK+S D+ D VGANLFIGNL PDVDEK LYDTFSAFG I
Sbjct: 77 DYAVKIMNLTKLFSKPIRCNKSSSDRIVRDEVGANLFIGNLGPDVDEKQLYDTFSAFGSI 136
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V KIMR +TG S+GFGF+SYD FEASDAA+ MNGQYLCNRQI+VSY+YKKD+KGER
Sbjct: 137 VVFCKIMR-SETGESKGFGFVSYDGFEASDAAMAGMNGQYLCNRQISVSYSYKKDSKGER 195
Query: 199 HGTPAERILAANNPSSQ 215
HGT AER++AAN SSQ
Sbjct: 196 HGTAAERMIAANRESSQ 212
>gi|403172110|ref|XP_003331254.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169716|gb|EFP86835.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 392
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 162/190 (85%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDRV+ HQGYGF EF +E+DA
Sbjct: 8 DRNQEATVYMGNLDERCTDALVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEDDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKLYGKPIRVNKAS D+K +D+GANLFIGNLD +VDE++LYDTFS FG +V
Sbjct: 68 EYACKIMNQIKLYGKPIRVNKASSDRKQVDIGANLFIGNLDANVDERMLYDTFSTFGTLV 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
KI R+P TG S G+GF++Y+SFEA+D AIE+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 128 QTAKIARNPTTGQSNGYGFVAYESFEAADTAIESMNGQFLMNKAITVQYAFKKDGKGERH 187
Query: 200 GTPAERILAA 209
GTPAER+LAA
Sbjct: 188 GTPAERLLAA 197
>gi|409082711|gb|EKM83069.1| hypothetical protein AGABI1DRAFT_118461 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200576|gb|EKV50500.1| hypothetical protein AGABI2DRAFT_183573 [Agaricus bisporus var.
bisporus H97]
Length = 296
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 162/190 (85%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFG++
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGMMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RD +G S+G+GF+SY FE+SDAAIE+MNGQ+L N+ ITV YA+KK+ KGERH
Sbjct: 127 TTAKIARDTGSGISKGYGFVSYTDFESSDAAIESMNGQFLMNKAITVQYAFKKEGKGERH 186
Query: 200 GTPAERILAA 209
GT AER+LAA
Sbjct: 187 GTAAERLLAA 196
>gi|392596200|gb|EIW85523.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 322
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 132/190 (69%), Positives = 162/190 (85%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + ++ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCSDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFG++
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDDNVDERLLYDTFSAFGLMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP +G S+G+GF+SY FE+SDAA+EAMNGQYL N+ +TV YA+KKD KGERH
Sbjct: 127 TTAKIARDPGSGMSKGYGFVSYIDFESSDAAVEAMNGQYLMNKPLTVQYAFKKDGKGERH 186
Query: 200 GTPAERILAA 209
GT AER LAA
Sbjct: 187 GTSAERTLAA 196
>gi|393220802|gb|EJD06288.1| hypothetical protein FOMMEDRAFT_18426 [Fomitiporia mediterranea
MF3/22]
Length = 358
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 133/204 (65%), Positives = 169/204 (82%), Gaps = 4/204 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD +V++ ++WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 6 DRNQEATVYLGNLDERVSDAIIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLF+GNLD ++DE+LLYDTFSAFG++
Sbjct: 66 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFVGNLDENLDERLLYDTFSAFGMLA 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T K+ RDP TG S+G+GF+SY FE++DAAIEAMN Q+L N+ I+V YA+KKD KGERH
Sbjct: 126 TTAKVARDPTTGKSKGYGFVSYIDFESADAAIEAMNNQFLMNKAISVQYAFKKDGKGERH 185
Query: 200 GTPAERILAA----NNPSSQKSRP 219
GTPAER+LAA NN +RP
Sbjct: 186 GTPAERLLAAQARKNNALPASARP 209
>gi|147898449|ref|NP_001089615.1| uncharacterized protein LOC734673 [Xenopus laevis]
gi|68534615|gb|AAH99272.1| MGC116464 protein [Xenopus laevis]
Length = 391
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 136/225 (60%), Positives = 179/225 (79%), Gaps = 6/225 (2%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S +RNQ+A+ Y+GNLD QV EE+LWE +QAGPV++V +P+D+V+ HQGYGFVEF++EE
Sbjct: 4 SEQRNQEASIYIGNLDSQVNEEILWECMLQAGPVLSVNMPRDKVSGFHQGYGFVEFKTEE 63
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
DADYA+KV+NMIKLY KPIR NKA+ DKK DVGANLF+GNL P+VDEK+L+DTFS FG
Sbjct: 64 DADYALKVMNMIKLYNKPIRCNKATTDKKIHDVGANLFVGNLAPEVDEKMLFDTFSQFGN 123
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+++ PKIM+DP++G S+GF F+S+DSF+ +D AI++MNGQ+ N+QI V YAYKKD+ GE
Sbjct: 124 LISTPKIMKDPESGGSKGFAFVSFDSFDGADHAIQSMNGQFFYNKQIVVQYAYKKDSNGE 183
Query: 198 RHGTPAERILAAN-NPSSQKSRPHTLFAS--GPPSLQNAPQANGT 239
R+G+ AER AAN NP K +P+T FA+ S+Q PQ G
Sbjct: 184 RYGSEAERKRAANLNP---KLKPNTTFAAPNSGVSMQGMPQVGGV 225
>gi|449681524|ref|XP_002157695.2| PREDICTED: splicing factor 3B subunit 4-like [Hydra magnipapillata]
Length = 328
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/175 (77%), Positives = 156/175 (89%)
Query: 56 VPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF 115
+PKDR+T HQGYGF+EF SEEDADYAIK+LNMIK+YGKPIRVNKAS K+LDVGAN+F
Sbjct: 1 MPKDRITQNHQGYGFIEFMSEEDADYAIKILNMIKVYGKPIRVNKASAHNKNLDVGANIF 60
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
IGNLDPD+DEKLLYDTFSAFGVI+T PKIMRDP+TGNS+GF FI++ SFEASDAAI+AMN
Sbjct: 61 IGNLDPDIDEKLLYDTFSAFGVILTTPKIMRDPETGNSKGFAFINFASFEASDAAIDAMN 120
Query: 176 GQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSL 230
GQYL NR I+VSY++KKDTKGERHG+ AER+LAA+NP +Q RPH LFA PP L
Sbjct: 121 GQYLSNRPISVSYSFKKDTKGERHGSAAERLLAASNPLTQSDRPHQLFADAPPML 175
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP + E+LL++ F G ++ + +D T +G
Sbjct: 41 IRVNKASAHNKNLDVGANIFIGNLDPDIDEKLLYDTFSAFGVILTTPKIMRDPETGNSKG 100
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ F+ F S E +D AI +N L +PI V+ + +D K
Sbjct: 101 FAFINFASFEASDAAIDAMNGQYLSNRPISVSYSFKKDTK 140
>gi|402225695|gb|EJU05756.1| hypothetical protein DACRYDRAFT_62409 [Dacryopinax sp. DJM-731 SS1]
Length = 341
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 131/196 (66%), Positives = 163/196 (83%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ + +RNQ+AT Y+GNLD +VT+ ++WEL +QAGPVVNV++PKDR++ HQGYGF EF
Sbjct: 1 MSKQQEDRNQEATVYLGNLDERVTDAIIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEF 60
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFS 133
+EEDA+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLDP+VDE+LLYDTFS
Sbjct: 61 LTEEDAEYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDPNVDERLLYDTFS 120
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
AFG++ KI RDP T S+G+GFISY FE+SD AIE+MN Q+L N+ ITV YA+KKD
Sbjct: 121 AFGILTQPAKIARDPQTSESKGYGFISYSDFESSDRAIESMNNQFLMNKAITVQYAFKKD 180
Query: 194 TKGERHGTPAERILAA 209
KGERHGT AER+LA+
Sbjct: 181 GKGERHGTDAERMLAS 196
>gi|393238609|gb|EJD46145.1| hypothetical protein AURDEDRAFT_113809 [Auricularia delicata
TFB-10046 SS5]
Length = 312
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 6/213 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD +VT+ ++WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRISMSHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTF+AFG++
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFTAFGLLS 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
KI RDP T S+G+GFISY FE+SDAAIE MNGQYL N+ ITV YA+KKD KGERH
Sbjct: 127 APAKIARDPQTMASKGYGFISYADFESSDAAIENMNGQYLMNKPITVQYAFKKDGKGERH 186
Query: 200 GTPAERILAANNPSSQKSRPHTL-FASGPPSLQ 231
GTPAER+LAA Q + + L F + PP ++
Sbjct: 187 GTPAERLLAA-----QARKNNALPFGARPPGMR 214
>gi|55960587|emb|CAI12647.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960979|emb|CAI12553.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
Length = 190
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 134/168 (79%), Positives = 151/168 (89%)
Query: 56 VPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF 115
+PKDRVT HQGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+F
Sbjct: 1 MPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIF 60
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
IGNLDP++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMN
Sbjct: 61 IGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN 120
Query: 176 GQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLF 223
GQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP SQ RPH LF
Sbjct: 121 GQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLF 168
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 41 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 100
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
Y F+ F S + +D AI+ +N L +PI V+ A
Sbjct: 101 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 134
>gi|328860868|gb|EGG09973.1| hypothetical protein MELLADRAFT_71116 [Melampsora larici-populina
98AG31]
Length = 382
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 127/191 (66%), Positives = 162/191 (84%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDRV+ HQGYGF EF +E+D
Sbjct: 7 GDRNQEATVYMGNLDERCTDALVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEDD 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
A+YA K++N IKLYGKPIRVNKAS D+K +D+GANLFIGNLD +VDE++LYDTF+ FG +
Sbjct: 67 AEYACKIMNQIKLYGKPIRVNKASSDRKQVDIGANLFIGNLDVNVDERMLYDTFNTFGTL 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V KI R+P TG S G+GF++Y+SFE++D AIE+MNGQ+L N+ ITV YA+KKD KGER
Sbjct: 127 VQTAKIARNPSTGQSNGYGFVAYESFESADTAIESMNGQFLMNKAITVQYAFKKDGKGER 186
Query: 199 HGTPAERILAA 209
HGTPAER+LAA
Sbjct: 187 HGTPAERLLAA 197
>gi|443918492|gb|ELU38942.1| splicing factor 3b subunit 4 [Rhizoctonia solani AG-1 IA]
Length = 325
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 128/190 (67%), Positives = 160/190 (84%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RN +AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQG+GF EF +EEDA
Sbjct: 8 DRNAEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISQAHQGFGFCEFLTEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNK+S DKK LDVGANLFIG LD +VDE+LLYDTFSAFGV+
Sbjct: 68 EYACKIMNQIKLWGKPIRVNKSSSDKKQLDVGANLFIGGLDLNVDERLLYDTFSAFGVMS 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T K+ RDP +G S+G+GF+SY FE++DAAIEAMNGQ+L N+ I V YA+KKD KGERH
Sbjct: 128 TTAKVARDPASGESKGYGFVSYTDFESADAAIEAMNGQFLMNKAIQVQYAFKKDGKGERH 187
Query: 200 GTPAERILAA 209
GT AER+LAA
Sbjct: 188 GTTAERMLAA 197
>gi|358057302|dbj|GAA96651.1| hypothetical protein E5Q_03322 [Mixia osmundae IAM 14324]
Length = 274
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/191 (68%), Positives = 160/191 (83%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+RNQ+AT Y+GNLD +VT+ L+WEL +Q GP+ NV++PKDRV+ HQGYGF EF++EED
Sbjct: 8 ADRNQEATIYMGNLDERVTDALVWELMLQCGPIGNVHLPKDRVSMAHQGYGFCEFQNEED 67
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
A+YA+K++N IKL+GKPIRVNKAS D+K +D+GANLFIGNLDP VDE+LLYD FS FG +
Sbjct: 68 AEYAVKIMNQIKLFGKPIRVNKASSDRKQVDIGANLFIGNLDPAVDERLLYDAFSNFGTM 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
I R+ TG SRG GFIS+D+FEASDAAIEAMN QYL N+ ITV YA+KKDTKGER
Sbjct: 128 TNTAYIPRETGTGASRGHGFISFDTFEASDAAIEAMNNQYLMNKPITVQYAFKKDTKGER 187
Query: 199 HGTPAERILAA 209
HG+ AER+LAA
Sbjct: 188 HGSAAERLLAA 198
>gi|299754121|ref|XP_001833772.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
gi|298410613|gb|EAU88064.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
Length = 332
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 127/182 (69%), Positives = 156/182 (85%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLF+GNLD +VDE+LLYDTFSAFG++
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFVGNLDENVDERLLYDTFSAFGMMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T KI RDP TG S+G+GF+SY FE+SDAAIE+MNGQ+L N+ ITV YA+KKD KGERH
Sbjct: 127 TTAKIARDPSTGVSKGYGFVSYTDFESSDAAIESMNGQFLMNKAITVQYAFKKDGKGERH 186
Query: 200 GT 201
GT
Sbjct: 187 GT 188
>gi|4263832|gb|AAD15475.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 314
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/188 (76%), Positives = 162/188 (86%), Gaps = 7/188 (3%)
Query: 54 VYVPKDRVTN--LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG 111
+Y P + V + + Q +GFV+F +EEDADYAIKV NMIKLYG+PIRV KASQDKKSLDVG
Sbjct: 24 LYKPDELVISVFIQQKFGFVQFHNEEDADYAIKVFNMIKLYGEPIRVKKASQDKKSLDVG 83
Query: 112 ANLFIGNLDP-DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
ANLF+GNLDP +VDEK+L+DTFSAFGVI +PKIMRDPDTGN RGFGFISYDSFEASDAA
Sbjct: 84 ANLFLGNLDPVNVDEKMLHDTFSAFGVISDHPKIMRDPDTGNPRGFGFISYDSFEASDAA 143
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSL 230
IEAM GQYL NRQITV+YAYKKDTKGERHGTP ER+LAAN SQ+SRPH LFA+G PS
Sbjct: 144 IEAMTGQYLSNRQITVTYAYKKDTKGERHGTPEERLLAAN---SQRSRPHKLFATG-PST 199
Query: 231 QNAPQANG 238
NAP+ NG
Sbjct: 200 HNAPKVNG 207
>gi|405119657|gb|AFR94429.1| splicing factor 3b subunit 4 [Cryptococcus neoformans var. grubii
H99]
Length = 304
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/227 (59%), Positives = 169/227 (74%), Gaps = 6/227 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPV NV++PKDR++ HQG+GF EF SE DA
Sbjct: 8 DRNQEATVYLGNLDERCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+K++N IKLYGKPIRVNKAS DKK +DVGANLF+GNLDP+VDE+ LYDTFS FG +
Sbjct: 68 EYAVKIMNQIKLYGKPIRVNKASYDKKQVDVGANLFVGNLDPNVDEQTLYDTFSTFGTLA 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKI RDP TG S+G FI+Y+ FEA+D AIE MNGQ+ +QIT YA+KKD KGERH
Sbjct: 128 EQPKIARDPTTGLSKGHAFIAYNDFEAADLAIENMNGQFFGGKQITAQYAFKKDGKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSL-QNAPQANGTVGGPVP 245
G+ AER+LAA Q + L A+G P+L AN V VP
Sbjct: 188 GSQAERLLAA-----QAKKRQLLPATGGPALPYQGQYANALVANSVP 229
>gi|58261610|ref|XP_568215.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115791|ref|XP_773609.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256235|gb|EAL18962.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230297|gb|AAW46698.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 304
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 170/230 (73%), Gaps = 6/230 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPV NV++PKDR++ HQG+GF EF SE DA
Sbjct: 8 DRNQEATVYLGNLDERCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+K++N IKLYGKPIRVNKAS DKK +DVGANLF+GNLDP+VDE+ LYDTFS FG +
Sbjct: 68 EYAVKIMNQIKLYGKPIRVNKASYDKKQVDVGANLFVGNLDPNVDEQTLYDTFSTFGTLA 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKI RDP TG S+G FI+Y+ FEA+D AIE MNGQ+ +QIT YA+KKD KGERH
Sbjct: 128 EQPKIARDPTTGLSKGHAFIAYNDFEAADLAIENMNGQFFGGKQITAQYAFKKDGKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSL-QNAPQANGTVGGPVPPRP 248
G+ AER+LAA Q + L A+G P+L AN V VP P
Sbjct: 188 GSQAERLLAA-----QAKKRQLLPATGGPALPYQGQYANALVVNSVPAAP 232
>gi|321257040|ref|XP_003193447.1| hypothetical protein CGB_D2450C [Cryptococcus gattii WM276]
gi|317459917|gb|ADV21660.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 308
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 170/230 (73%), Gaps = 6/230 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPV NV++PKDR++ HQG+GF EF SE DA
Sbjct: 8 DRNQEATVYLGNLDEKCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+K++N IKLYGKPIRVNKAS DKK +DVGANLF+GNLDP+VDE+ LYDTFS FG +
Sbjct: 68 EYAVKIMNQIKLYGKPIRVNKASYDKKQVDVGANLFVGNLDPNVDEQTLYDTFSTFGTLA 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKI RDP TG S+G FI+Y+ FEA+D AIE MNGQ+ +QIT YA+KKD KGERH
Sbjct: 128 DQPKIARDPTTGLSKGHAFIAYNDFEAADLAIENMNGQFFGGKQITAQYAFKKDGKGERH 187
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSL-QNAPQANGTVGGPVPPRP 248
G+ AER+LAA Q + L ++G P+L AN V VP P
Sbjct: 188 GSQAERLLAA-----QAKKRQLLPSTGGPALPYQGQYANALVANAVPAAP 232
>gi|388858107|emb|CCF48344.1| related to spliceosome-associated protein SAP-49 [Ustilago hordei]
Length = 297
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/323 (50%), Positives = 205/323 (63%), Gaps = 39/323 (12%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y+GN+D + T+ ++WEL +QAGP+VN+++PKDR+T HQGY F EF++E+DA
Sbjct: 8 DRNQDATCYIGNIDDRATDAIVWELMIQAGPLVNLHLPKDRITQSHQGYAFAEFQTEQDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA KV+N +KLYGKPIRVNKAS D+K +D+GANLF+G+LDP VDE+LLY+TFSAFG I+
Sbjct: 68 DYACKVMNGLKLYGKPIRVNKASNDRKQIDIGANLFVGSLDPAVDERLLYETFSAFGGII 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GER 198
PK+ RDP G +GFGF+S+DSFEA+DAAIEA+NGQ+L N ITV YA KKD+K GER
Sbjct: 128 GLPKVARDPAGGEPKGFGFVSFDSFEAADAAIEALNGQFLLNNNITVDYAIKKDSKNGER 187
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPI 258
HGT AER+LAA ++R + + Q PQ G PP GP+
Sbjct: 188 HGTAAERLLAA------QARKNNALPT-----QQYPQQAGQ-----PPL--------GPM 223
Query: 259 SAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPPPNMPPPPPP 318
A P P AAA A QAAW G Q PP P PPP
Sbjct: 224 GA--PYLQQPHAAANSNAHQA-QAAWTGFAQQ----------PPAAASHAYAQGPLQPPP 270
Query: 319 QLASAMQRPPPQPMGMGAQPPVW 341
LA+ Q M GA PP +
Sbjct: 271 HLAAYQQNTAAIHMNPGA-PPAY 292
>gi|156088689|ref|XP_001611751.1| RNA recognition motif domaining containing protein [Babesia bovis]
gi|154799005|gb|EDO08183.1| RNA recognition motif domaining containing protein [Babesia bovis]
Length = 280
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 164/193 (84%), Gaps = 1/193 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT YVGN+D QV EELLWE FVQ GPV ++++P+D+VT HQGY FVEF +++DA
Sbjct: 13 DRNQEATLYVGNVDTQVDEELLWEFFVQVGPVKHLHIPRDKVTGHHQGYAFVEFDTDDDA 72
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYAI++LN +KLY KP+R+NKAS+DK++ ++GANLFIGNLDPDVD+K L+DTF++FG ++
Sbjct: 73 DYAIRILNFVKLYNKPLRLNKASRDKQTFEIGANLFIGNLDPDVDDKQLHDTFASFGNVI 132
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ ++RD D + + F F+SYDSFEASDAA+ AMNGQ++CN+ I VSYAYKKDTKGERH
Sbjct: 133 S-ANVVRDGDATDRKAFAFVSYDSFEASDAALAAMNGQFICNKPIHVSYAYKKDTKGERH 191
Query: 200 GTPAERILAANNP 212
G+ AER++AAN P
Sbjct: 192 GSAAERLIAANRP 204
>gi|443900412|dbj|GAC77738.1| splicing factor 3b, subunit 4 [Pseudozyma antarctica T-34]
Length = 319
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y+GNLD + T+ ++WEL +QAGP+VN+++PKDR++ HQGY F EF++E+DA
Sbjct: 58 DRNQDATCYIGNLDERATDAIVWELMIQAGPLVNLHLPKDRISQTHQGYAFAEFQTEQDA 117
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA KV+N +KLYGKPIRVNKAS D+K +D+GANLF+G+LDP VDE LLY+TFSAFG IV
Sbjct: 118 DYACKVMNGLKLYGKPIRVNKASNDRKQIDIGANLFVGSLDPAVDEHLLYETFSAFGNIV 177
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GER 198
PK+ RDP TG +G+ F+S+DSFEA+DAA+EA+NGQ+L N+ ITV YA KKD+K GER
Sbjct: 178 GLPKVARDPATGEPKGYAFVSFDSFEAADAAVEALNGQFLLNKNITVDYAIKKDSKNGER 237
Query: 199 HGTPAERILAA 209
HGT AER+LAA
Sbjct: 238 HGTAAERLLAA 248
>gi|343425574|emb|CBQ69109.1| related to spliceosome-associated protein SAP-49 [Sporisorium
reilianum SRZ2]
Length = 272
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y+GN+D + T+ ++WEL +QAGP+VN+++PKDR+T HQGY F EF++E+DA
Sbjct: 8 DRNQDATCYIGNIDDRATDAIVWELMIQAGPLVNLHLPKDRITQTHQGYAFAEFQTEQDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA KV+N +KLYGKPIRVNKAS D+K +D+GANLF+G+LD VDE+LLY+TFSAFG I+
Sbjct: 68 DYACKVMNGLKLYGKPIRVNKASNDRKQIDIGANLFVGSLDAAVDERLLYETFSAFGGIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GER 198
PK+ RDP +G +GF F+S+DSFEA+DAAIEA+NGQ+L N+ ITV YA KKD+K GER
Sbjct: 128 GLPKVARDPASGEPKGFAFVSFDSFEAADAAIEALNGQFLLNKNITVDYAIKKDSKNGER 187
Query: 199 HGTPAERILAA 209
HGT AER+LAA
Sbjct: 188 HGTAAERLLAA 198
>gi|353227298|emb|CCA77811.1| related to spliceosome-associated protein SAP-49 [Piriformospora
indica DSM 11827]
Length = 298
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 157/190 (82%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD +VT+ ++WEL +QAGPVVNV++PKDRV+ HQGYGF EF +EEDA
Sbjct: 8 DRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LD+GANLFIGNLDP VDE+LLYDTF+ FG +
Sbjct: 68 EYACKIMNQIKLWGKPIRVNKASSDKKQLDIGANLFIGNLDPAVDERLLYDTFTVFGPLT 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
KI RDP T SRG GF+SY FE++DAAIEAMN QYL N+ I V YA+KKD KGERH
Sbjct: 128 QPAKIARDPTTMESRGHGFVSYADFESADAAIEAMNKQYLMNKPIEVQYAFKKDGKGERH 187
Query: 200 GTPAERILAA 209
GT AER+LAA
Sbjct: 188 GTEAERLLAA 197
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 167/199 (83%), Gaps = 1/199 (0%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERN DAT YVG +D +VT+E+LWELF Q G VVNV++PKD++T HQGYGFVEF+SEED
Sbjct: 6 SERNPDATIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEED 65
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADY+IK+++++KLYGKPI+VNKASQDK++ +VGAN+FIGNLD + E+ L+DTFS FG+I
Sbjct: 66 ADYSIKIMHLVKLYGKPIKVNKASQDKRTQEVGANIFIGNLDQSITEQQLHDTFSQFGLI 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ +I+RDPD S+G+ F+SYD+FEA+DAAI MNGQ+ +++I V YA+KKD+KGER
Sbjct: 126 ISR-RIVRDPDNDESKGYAFVSYDNFEAADAAINTMNGQFFGSKKINVQYAFKKDSKGER 184
Query: 199 HGTPAERILAANNPSSQKS 217
HG+ AER+LAAN P Q +
Sbjct: 185 HGSAAERLLAANKPQQQNT 203
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGY 68
+ N Q + A ++GNLD +TE+ L + F Q G +++ + +D + +GY
Sbjct: 83 IKVNKASQDKRTQEVGANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDESKGY 142
Query: 69 GFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
FV + + E AD AI +N K I V A
Sbjct: 143 AFVSYDNFEAADAAINTMNGQFFGSKKINVQYA 175
>gi|296424721|ref|XP_002841895.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638146|emb|CAZ86086.1| unnamed protein product [Tuber melanosporum]
Length = 392
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 182/363 (50%), Positives = 225/363 (61%), Gaps = 43/363 (11%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +V++ L+WEL +QAG +VNV++PKDRVT HQG+GFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVSDALVWELMLQAGRIVNVHLPKDRVTQTHQGFGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP VDEK L+DT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVDEKTLFDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
F+ FG +V+ PKI RD D G S+GFGFISYDSFEASD AIE+M+ Q+L N++I V YAYK
Sbjct: 121 FTTFGNLVSAPKIARD-DQGISKGFGFISYDSFEASDKAIESMHNQFLMNKEINVQYAYK 179
Query: 192 KDTKGERHGTPAERILAA-----NNPSSQKSRPHTLFA-SGPPSLQNAPQANGTVGGPVP 245
KD KGERHG AER+LAA N + + P LFA +GP S VP
Sbjct: 180 KDGKGERHGDQAERLLAAQAKKHNVQITPQQLPAQLFAPTGPTS-------------GVP 226
Query: 246 PRPYANG--AASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQ--------GV 295
P P G A S P + R PP PQ P Q + P Q G
Sbjct: 227 PIPVGAGPPAPSAPGNFQRGPPARPQNGMTNPHDQGFQGGFHAPPPGPPQGLPPAGRGGA 286
Query: 296 PQPVMPPPM-QFRPPPN----MPPPP---PPQLASAMQRPPPQPMGMGAQP--PVWRQPP 345
PQ PP Q PPP PPPP P A RPPP P+G AQP P + QPP
Sbjct: 287 PQHHAPPHQPQLAPPPQGLPARPPPPVGFQPHQQHAYGRPPP-PVGF-AQPMHPGFSQPP 344
Query: 346 PPP 348
P P
Sbjct: 345 PLP 347
>gi|71021191|ref|XP_760826.1| hypothetical protein UM04679.1 [Ustilago maydis 521]
gi|46100200|gb|EAK85433.1| hypothetical protein UM04679.1 [Ustilago maydis 521]
Length = 294
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 126/191 (65%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y+GN+D + + ++WEL +QAGP+VN+++PKDR+T HQGY F EF++E+DA
Sbjct: 8 DRNQDATCYIGNIDDRANDAIVWELMIQAGPLVNLHLPKDRITQSHQGYAFAEFQTEQDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA KV+N +KLYGKPIRVNKAS D+K +D+GANLF+G+LDP VDE+LLY+TFSAFG I+
Sbjct: 68 DYACKVMNGLKLYGKPIRVNKASNDRKPIDIGANLFVGSLDPAVDERLLYETFSAFGGII 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GER 198
PKI RDP +G +GF F+S+DSFEA+DAAIEA+NGQ+L N+ ITV YA KKD+K GER
Sbjct: 128 GLPKIARDPTSGEPKGFAFVSFDSFEAADAAIEALNGQFLLNKNITVDYAIKKDSKNGER 187
Query: 199 HGTPAERILAA 209
HGT AER+LAA
Sbjct: 188 HGTAAERLLAA 198
>gi|430811379|emb|CCJ31130.1| unnamed protein product [Pneumocystis jirovecii]
Length = 285
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/201 (65%), Positives = 164/201 (81%), Gaps = 6/201 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT YVGNLD + T+ +LWELF+Q GPVVNV++PKDRV+ HQG+GF EF + EDA
Sbjct: 8 ERNQEATIYVGNLDERTTDAILWELFLQCGPVVNVHLPKDRVSQTHQGFGFCEFLTVEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK-SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA +++N IKLYGKPIRVNKAS DKK ++++GA LF+GNLDP V+EK+LYDTFS FG++
Sbjct: 68 DYACRIMNQIKLYGKPIRVNKASADKKNTIEIGAELFVGNLDPLVNEKVLYDTFSVFGML 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PKI RD D G S+ FGFIS+DSFEA+DAAIE MN Q+L N+ ++VSYA+KKD KGER
Sbjct: 128 VAPPKIARD-DNGQSKCFGFISFDSFEAADAAIEGMNNQFLMNKSVSVSYAFKKDGKGER 186
Query: 199 HGTPAERILAA----NNPSSQ 215
HG AER+LA+ NN S Q
Sbjct: 187 HGDQAERLLASQARKNNVSLQ 207
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 163/194 (84%), Gaps = 1/194 (0%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERN DAT YVG LD +VT+E+LWELF Q G V+NV++P+D++T HQGYGFVE+++EED
Sbjct: 6 SERNSDATLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQGYGFVEYKTEED 65
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
ADYAIK+L++IKLYGKPI+VNKASQDK++ +VGAN+FIGNLDP V E L +TFS FG+I
Sbjct: 66 ADYAIKILHLIKLYGKPIKVNKASQDKRTQEVGANIFIGNLDPSVTEMQLQETFSTFGLI 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ +I+RD D S+G+ FISYD+FE+SD AI AMNGQY +++I+V YA+KKD+KGER
Sbjct: 126 IGR-RIVRDSDNNQSKGYAFISYDNFESSDNAISAMNGQYYGSQKISVQYAFKKDSKGER 184
Query: 199 HGTPAERILAANNP 212
HG+ AER+LAAN P
Sbjct: 185 HGSAAERLLAANRP 198
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGY 68
+ N Q + A ++GNLDP VTE L E F G ++ + +D N +GY
Sbjct: 83 IKVNKASQDKRTQEVGANIFIGNLDPSVTEMQLQETFSTFGLIIGRRIVRDSDNNQSKGY 142
Query: 69 GFVEFRSEEDADYAIKVLN 87
F+ + + E +D AI +N
Sbjct: 143 AFISYDNFESSDNAISAMN 161
>gi|345312295|ref|XP_001516274.2| PREDICTED: splicing factor 3B subunit 4-like [Ornithorhynchus
anatinus]
Length = 372
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/163 (77%), Positives = 146/163 (89%)
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
++ +QGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS K+LDVGAN+FIGNLD
Sbjct: 120 ISERNQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLD 179
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
P++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLC
Sbjct: 180 PEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLC 239
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLF 223
NR ITVSYA+KKD+KGERHG+ AER+LAA NP SQ RPH LF
Sbjct: 240 NRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLF 282
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 9 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQG 67
+ N H+ + A ++GNLDP++ E+LL++ F G ++ + +D T +G
Sbjct: 155 IRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKG 214
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
Y F+ F S + +D AI+ +N L +PI V+ A +D K
Sbjct: 215 YAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 254
>gi|403221974|dbj|BAM40106.1| splicing factor 3b subunit 4 [Theileria orientalis strain Shintoku]
Length = 326
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 174/217 (80%), Gaps = 9/217 (4%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MT+R+ ++L + +RNQ+AT Y+GNLD Q EELLWE F+QAG V ++ +P+D+
Sbjct: 1 MTSRVL-----DILSLY--DRNQEATLYIGNLDIQADEELLWEFFMQAGRVRSINIPRDK 53
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
VT HQG+GFVE+ +E DADYA+++LN IKLY KP+R+NKAS+DK++ ++GANLFIGN+D
Sbjct: 54 VTGQHQGFGFVEYETETDADYALRILNFIKLYHKPLRLNKASKDKENTEIGANLFIGNID 113
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+VDEKLL+DTFSAFG +V KI+RD + + R + F+S+D+FE+SDAA+ +MNGQ+LC
Sbjct: 114 DEVDEKLLHDTFSAFGTVVFT-KIVRD-EANSGRSYAFVSFDNFESSDAALASMNGQFLC 171
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKS 217
N+ I VSYAYKKDTKGERHG+ AER++AAN PS KS
Sbjct: 172 NKPIHVSYAYKKDTKGERHGSAAERLIAANRPSDFKS 208
>gi|258569671|ref|XP_002543639.1| splicing factor 3B subunit 4 [Uncinocarpus reesii 1704]
gi|237903909|gb|EEP78310.1| splicing factor 3B subunit 4 [Uncinocarpus reesii 1704]
Length = 348
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 181/249 (72%), Gaps = 13/249 (5%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT YVGNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNQVRLYGKPIRVNKASADKQKTIEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D S+G+GF+S+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISMPKVARD-DANLSKGYGFVSFANFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNA-PQANGTVGGPVPPRPYA 250
KD KGERHG AER+LAA ++R H + P Q PQ G P+P P
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV----QPQTQVVPPQLAGGAVPPLPHTPVM 229
Query: 251 NGAASGPIS 259
NG S PIS
Sbjct: 230 NGDVSRPIS 238
>gi|336380658|gb|EGO21811.1| hypothetical protein SERLADRAFT_397224 [Serpula lacrymans var.
lacrymans S7.9]
Length = 183
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 122/177 (68%), Positives = 149/177 (84%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL +QAGPVVNV++PKDR++ HQGYGF EF +EEDA
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA K++N IKL+GKPIRVNKAS DKK LDVGANLFIGNLD +VDE+LLYDTFSAFGV+
Sbjct: 67 EYACKIMNQIKLWGKPIRVNKASSDKKQLDVGANLFIGNLDENVDERLLYDTFSAFGVMA 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
T KI RDP TG S+G+GF SY FE+SDAA E+MNGQ+L N+ I+V YA+KKD KG
Sbjct: 127 TTAKIARDPGTGKSKGYGFASYTDFESSDAATESMNGQFLMNKAISVQYAFKKDGKG 183
>gi|378730244|gb|EHY56703.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 345
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/248 (55%), Positives = 177/248 (71%), Gaps = 12/248 (4%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E+++D+T Y+GNLD +VT+ L+WELF+QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKDSTIYIGNLDERVTDALVWELFLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK KS++VGA LF+GNLDP VDE++LY+T
Sbjct: 61 FTSEEDAEYAARIMNQVRLYGKPIRVNKASADKQKSVEVGAELFVGNLDPMVDERMLYET 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
F FG +V PKI RD + S+G+GF+S+ FE+SD AI MNGQYL N+++TV YAYK
Sbjct: 121 FGRFGTLVAAPKIARD-ENNLSKGYGFVSFADFESSDDAIANMNGQYLMNKEVTVQYAYK 179
Query: 192 KDTKGERHGTPAERILAAN-NPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
KD KGERHG AER+LAA + P T+ GPP+ P P P P
Sbjct: 180 KDGKGERHGDQAERMLAAQAKAHGVQPTPATIPLGGPPAYGGVP--------PTPTTPAG 231
Query: 251 NGA-ASGP 257
GA A GP
Sbjct: 232 FGAPAHGP 239
>gi|145250071|ref|XP_001396549.1| spliceosome-associated protein 49 [Aspergillus niger CBS 513.88]
gi|134082060|emb|CAK42179.1| unnamed protein product [Aspergillus niger]
gi|350636041|gb|EHA24401.1| hypothetical protein ASPNIDRAFT_56267 [Aspergillus niger ATCC 1015]
Length = 351
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/249 (56%), Positives = 183/249 (73%), Gaps = 12/249 (4%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK KS+++GA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +V PKI RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYK
Sbjct: 121 FSRFGNLVNIPKIARD-DNNLSKGYGFVSFADFESSDAAITNMNGQYLMNKQVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYAN 251
KD KGERHG AER+LAA ++R H + PP+ PQ + G P+ P AN
Sbjct: 180 KDGKGERHGDEAERMLAA------QARKHNV---RPPTQPLPPQFSNP-GTPMVPAAMAN 229
Query: 252 GAASGPISA 260
G +S P+S
Sbjct: 230 GDSSRPMST 238
>gi|223995445|ref|XP_002287396.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976512|gb|EED94839.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 305
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/264 (55%), Positives = 176/264 (66%), Gaps = 39/264 (14%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
RNQ+AT YVGNLDP VTE++L ELF Q G V +V++PKD++T LH GYGFVEF DAD
Sbjct: 1 RNQEATCYVGNLDPSVTEDILVELFTQIGRVSSVHMPKDKITGLHSGYGFVEFLDVTDAD 60
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKK----SLDVGANLFIGNLDP-DVDEKLLYDTFSAF 135
YAI++++M+KL+ +P+RVNK+S DKK SLDVGANLFIGNLDP DVDEKLLYDTFSAF
Sbjct: 61 YAIQIMSMVKLFSRPLRVNKSSLDKKTGVGSLDVGANLFIGNLDPADVDEKLLYDTFSAF 120
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDT- 194
G I+ PKIMRD T S+GFGF+S+D+FEASD AIE M+ QYL NRQITV YA+KK T
Sbjct: 121 GTIIRPPKIMRDDMTNQSKGFGFVSFDAFEASDLAIECMHNQYLGNRQITVQYAFKKGTT 180
Query: 195 ---------------KG-----ERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAP 234
KG ERHG+ AER+LAA N PH F S L
Sbjct: 181 SSGGGENGDMVAEGGKGPGGMPERHGSRAERMLAAAN-------PHREFLSTRTGL---- 229
Query: 235 QANGTVGGPVPPRPYANGAASGPI 258
G+ VP +A AA G +
Sbjct: 230 --GGSGVQKVPNTMFATSAARGNL 251
>gi|358375675|dbj|GAA92254.1| splicing factor 3b subunit 4 [Aspergillus kawachii IFO 4308]
Length = 352
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/249 (56%), Positives = 180/249 (72%), Gaps = 12/249 (4%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK KS+++GA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +V PKI RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYK
Sbjct: 121 FSRFGNLVNIPKIARD-DNNLSKGYGFVSFADFESSDAAITNMNGQYLMNKQVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYAN 251
KD KGERHG AER+LAA ++R H + P Q P G P+ P AN
Sbjct: 180 KDGKGERHGDEAERMLAA------QARKHNV----RPPTQPLPPQFSNPGTPMVPAAMAN 229
Query: 252 GAASGPISA 260
G +S P+S
Sbjct: 230 GDSSRPMST 238
>gi|296810102|ref|XP_002845389.1| splicing factor 3B subunit 4 [Arthroderma otae CBS 113480]
gi|238842777|gb|EEQ32439.1| splicing factor 3B subunit 4 [Arthroderma otae CBS 113480]
Length = 371
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT++L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FNSEEDAEYASRIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D+ S+G+GFIS+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDEAERMLAA------QARKHNV 204
>gi|315044761|ref|XP_003171756.1| splicing factor 3B subunit 4 [Arthroderma gypseum CBS 118893]
gi|311344099|gb|EFR03302.1| splicing factor 3B subunit 4 [Arthroderma gypseum CBS 118893]
Length = 382
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT++L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FNSEEDAEYASRIMNQVRLYGKPIRVNKASADKQKAVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D+ S+G+GFIS+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDEAERMLAA------QARKHNV 204
>gi|388579997|gb|EIM20315.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 260
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 158/192 (82%), Gaps = 1/192 (0%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+RNQ+AT Y+GN+ V++ ++WEL +QAGPV +V++PKDRV+ HQG+GF EF ++E
Sbjct: 8 DVDRNQEATIYIGNIPEAVSDAIIWELMLQAGPVASVHLPKDRVSMSHQGFGFCEFVNDE 67
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
DA+YA K++N IKLYGKPIRVNKAS D+K +DVGANLFIGNLDP VDE+LL+DTFS FG+
Sbjct: 68 DAEYACKIMNQIKLYGKPIRVNKASTDRKQIDVGANLFIGNLDPGVDERLLFDTFSTFGL 127
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
++ KI RD DTG S+G+GFI Y+ F++SD AI AMNGQYL N+ +TV YA+KKD KGE
Sbjct: 128 MMDVAKIARD-DTGYSKGYGFIQYNDFDSSDQAISAMNGQYLMNKPLTVDYAFKKDGKGE 186
Query: 198 RHGTPAERILAA 209
RHGT AER+LAA
Sbjct: 187 RHGTEAERMLAA 198
>gi|226290828|gb|EEH46282.1| spliceosome associated protein [Paracoccidioides brasiliensis Pb18]
Length = 390
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LFIGNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFIGNLDPMVTEQILYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++++V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|302510905|ref|XP_003017404.1| hypothetical protein ARB_04284 [Arthroderma benhamiae CBS 112371]
gi|291180975|gb|EFE36759.1| hypothetical protein ARB_04284 [Arthroderma benhamiae CBS 112371]
Length = 379
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/245 (54%), Positives = 178/245 (72%), Gaps = 28/245 (11%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT++L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FNSEEDAEYASRIMNQVRLYGKPIRVNKASADKQKAVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D+ S+G+GFIS+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL-----------FASGPPS---------LQ 231
KD KGERHG AER+LAA ++R H + FA G P+ +Q
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNVQPQPQQPIPPQFAGGAPTAPGGAMNAGVQ 233
Query: 232 NAPQA 236
N P A
Sbjct: 234 NVPSA 238
>gi|119196451|ref|XP_001248829.1| hypothetical protein CIMG_02600 [Coccidioides immitis RS]
gi|392861968|gb|EAS37425.2| splicing factor 3b subunit 4 [Coccidioides immitis RS]
Length = 347
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/251 (55%), Positives = 179/251 (71%), Gaps = 9/251 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT YVGNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNQVRLYGKPIRVNKASADKLKAIEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D S+G+GF+S+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAAN------NPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVP 245
KD KGERHG AER+LAA P +Q PH PP + P NG + PV
Sbjct: 180 KDGKGERHGDQAERMLAAQARKHNVQPQTQVLPPHVPGGHAPP-MAPTPAVNGDISRPVS 238
Query: 246 PRPYANGAASG 256
P GA G
Sbjct: 239 TGPPDFGAGRG 249
>gi|295669139|ref|XP_002795118.1| spliceosome associated protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285811|gb|EEH41377.1| spliceosome associated protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 389
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LFIGNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKHKTVEVGAELFIGNLDPMVTEQILYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++++V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|302668184|ref|XP_003025667.1| hypothetical protein TRV_00155 [Trichophyton verrucosum HKI 0517]
gi|291189788|gb|EFE45056.1| hypothetical protein TRV_00155 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT++L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FNSEEDAEYASRIMNQVRLYGKPIRVNKASADKQKAVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D+ S+G+GFIS+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|327297502|ref|XP_003233445.1| splicing factor 3b subunit 4 [Trichophyton rubrum CBS 118892]
gi|326464751|gb|EGD90204.1| splicing factor 3b subunit 4 [Trichophyton rubrum CBS 118892]
Length = 379
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 168/211 (79%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT++L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FNSEEDAEYASRIMNQVRLYGKPIRVNKASADKQKAVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D+ S+G+GFIS+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|406865924|gb|EKD18965.1| splicing factor 3b subunit 4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 650
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 159/197 (80%), Gaps = 2/197 (1%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G E++++AT Y+GN+D +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVEF
Sbjct: 3 GARHWEQDKEATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFI 62
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFS 133
SEEDA+YA +++N ++LYGKPIRVNKAS DK K ++VGA LFIGNLDP VDEK LYDTFS
Sbjct: 63 SEEDAEYAARIMNQVRLYGKPIRVNKASADKQKPIEVGAELFIGNLDPMVDEKTLYDTFS 122
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG + PKI RD ++G S+G+GF+SY +FEASD AI MNGQYL N+ ++V YAYKKD
Sbjct: 123 RFGSLQAPPKIARD-ESGLSKGYGFVSYATFEASDDAIANMNGQYLMNKDVSVQYAYKKD 181
Query: 194 TKGERHGTPAERILAAN 210
KGERHG AER+LA++
Sbjct: 182 GKGERHGDEAERMLASS 198
>gi|345567290|gb|EGX50224.1| hypothetical protein AOL_s00076g299 [Arthrobotrys oligospora ATCC
24927]
Length = 385
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 157/191 (82%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+++DAT Y+GNLD +VT+ L+WEL +QAG + NV++PKDRVT HQG+GFVEF SEEDA
Sbjct: 7 EQDKDATVYIGNLDERVTDALVWELMLQAGRISNVHLPKDRVTQTHQGFGFVEFVSEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA +++N I+LYGKPIRVNKAS DK K+++VGA LFIGNLD VDEK LYDTF FG I
Sbjct: 67 EYAARIMNQIRLYGKPIRVNKASADKQKTVEVGAELFIGNLDSMVDEKTLYDTFMTFGTI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
PKI RD + G SRGFGF+ +D+FE+SD AI+AM GQYL N++I+VSYA+KKD KGER
Sbjct: 127 TAPPKIARD-EAGISRGFGFVQFDNFESSDKAIDAMQGQYLMNKEISVSYAFKKDGKGER 185
Query: 199 HGTPAERILAA 209
HG AER+LA+
Sbjct: 186 HGDQAERLLAS 196
>gi|121703528|ref|XP_001270028.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
gi|119398172|gb|EAW08602.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
Length = 354
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 165/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK KS+++GA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIGAELFVGNLDPLVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +V PK+ RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYK
Sbjct: 121 FSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAAIANMNGQYLMNKQVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDEAERMLAA------QARKHNV 204
>gi|239608889|gb|EEQ85876.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis ER-3]
Length = 383
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|261187642|ref|XP_002620240.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis
SLH14081]
gi|239594131|gb|EEQ76712.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis
SLH14081]
gi|327357210|gb|EGE86067.1| splicing factor 3b subunit 4 [Ajellomyces dermatitidis ATCC 18188]
Length = 383
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|67540662|ref|XP_664105.1| hypothetical protein AN6501.2 [Aspergillus nidulans FGSC A4]
gi|40738651|gb|EAA57841.1| hypothetical protein AN6501.2 [Aspergillus nidulans FGSC A4]
gi|259480068|tpe|CBF70863.1| TPA: splicing factor 3b subunit 4 (AFU_orthologue; AFUA_6G05180)
[Aspergillus nidulans FGSC A4]
Length = 352
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +V++ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVSDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK KS+++GA LF+GNLDP V E++LYDT
Sbjct: 61 FNSEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +V PK+ RD D+ S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYK
Sbjct: 121 FSRFGNLVNLPKVARD-DSNLSKGYGFVSFADFESSDAAIANMNGQYLMNKQVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|119467844|ref|XP_001257728.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
gi|119405880|gb|EAW15831.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
Length = 352
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 155/321 (48%), Positives = 205/321 (63%), Gaps = 48/321 (14%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK K++++GA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNGIRLYGKPIRVNKASADKQKAVEIGAELFVGNLDPLVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +V PK+ RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYK
Sbjct: 121 FSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAAIANMNGQYLMNKQVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYAN 251
KD KGERHG AER+LAA ++R H + P Q P + G P+ AN
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV----RPPTQPLPPQFSSPGTPMAAAGMAN 229
Query: 252 GAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPPPN 311
G + +SA PP+ A G+GVP PP + F+ N
Sbjct: 230 GDGTQALSAA-----PPELAT-------------------GRGVP----PPNLGFQ---N 258
Query: 312 MPPPPPPQLASAMQRPPPQPM 332
+PPP P + Q PP P+
Sbjct: 259 VPPPQPNR-----QLPPTAPL 274
>gi|348684961|gb|EGZ24776.1| hypothetical protein PHYSODRAFT_484926 [Phytophthora sojae]
Length = 209
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 119/160 (74%), Positives = 141/160 (88%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT YVGNLD +VTEELLWEL +QAG V NV++P+D+VT HQ YGFVEFR+EE A
Sbjct: 7 QRNQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVTGSHQNYGFVEFRTEECA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+KVLNM++L+GK IRV KAS D+K+LDVGANLF+GNLDP+VDEKLLYDTFSAFG I+
Sbjct: 67 EYAVKVLNMVQLFGKAIRVKKASSDRKNLDVGANLFLGNLDPEVDEKLLYDTFSAFGGII 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
PKIMRDPDT SRGFGF+S+DSFEA+D AIE M+GQYL
Sbjct: 127 ETPKIMRDPDTKASRGFGFVSFDSFEAADLAIECMHGQYL 166
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
A +++GNLD V E+LL++ G V N + RD TG+ + +GF+ + + E ++ A+
Sbjct: 12 ATVYVGNLDDRVTEELLWELMLQAGS-VCNVHMPRDKVTGSHQNYGFVEFRTEECAEYAV 70
Query: 172 EAMNGQYLCNRQITVSYA 189
+ +N L + I V A
Sbjct: 71 KVLNMVQLFGKAIRVKKA 88
>gi|154276886|ref|XP_001539288.1| hypothetical protein HCAG_06893 [Ajellomyces capsulatus NAm1]
gi|150414361|gb|EDN09726.1| hypothetical protein HCAG_06893 [Ajellomyces capsulatus NAm1]
Length = 387
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD ++T+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++++V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|392577429|gb|EIW70558.1| hypothetical protein TREMEDRAFT_71330 [Tremella mesenterica DSM
1558]
Length = 331
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 120/190 (63%), Positives = 152/190 (80%), Gaps = 4/190 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQ+AT Y+GNLD + T+ L+WEL + NV++PKDR++ HQG+GF EF +EED+
Sbjct: 10 DRNQEATVYLGNLDEKCTDALIWELMLS----TNVFLPKDRISMNHQGFGFCEFLTEEDS 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+K++N IKLYGKPIRVNKAS DKK LD+GANLFIGNLD +VDE LYDTF+ FG I
Sbjct: 66 EYAVKIMNQIKLYGKPIRVNKASYDKKQLDIGANLFIGNLDLNVDENALYDTFATFGSIA 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+PKI RDP TG S+G+GF+SY F+A+D AIE MNGQ+ +QITV YA+KKD KGERH
Sbjct: 126 EHPKISRDPTTGQSKGYGFVSYHDFDAADMAIENMNGQFFGGQQITVQYAFKKDGKGERH 185
Query: 200 GTPAERILAA 209
G+ AER+LAA
Sbjct: 186 GSAAERLLAA 195
>gi|238493972|ref|XP_002378222.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
gi|317148789|ref|XP_001822912.2| spliceosome-associated protein 49 [Aspergillus oryzae RIB40]
gi|220694872|gb|EED51215.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
Length = 354
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/248 (55%), Positives = 179/248 (72%), Gaps = 12/248 (4%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK KS+++GA LF+GNLDP V E++LY+T
Sbjct: 61 FISEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIGAELFVGNLDPMVTEQVLYNT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG ++ PKI RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYK
Sbjct: 121 FSRFGNLINLPKIARD-DNNLSKGYGFVSFGDFESSDAAIANMNGQYLMNKQVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYAN 251
KD KGERHG AER+LAA ++R H + P Q P G P+ P AN
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV----RPPTQPLPSPFSGSGTPMVPPAMAN 229
Query: 252 GAASGPIS 259
G +S IS
Sbjct: 230 GDSSRQIS 237
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 105/279 (37%), Gaps = 35/279 (12%)
Query: 109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
D A ++IGNLD V + L+++ G IV N + +D T + +G+GF+ + S E ++
Sbjct: 10 DKEATVYIGNLDERVTDSLVWELMLQAGRIV-NVHLPKDRVTQSHQGYGFVEFISEEDAE 68
Query: 169 AAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPP 228
A MNG L + I V+ A K G AE + +P + + F S
Sbjct: 69 YASRIMNGIRLYGKPIRVNKASADKQKSVEIG--AELFVGNLDPMVTEQVLYNTF-SRFG 125
Query: 229 SLQNAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQ--G 286
+L N P+ + + G + QV+ Q A++ G
Sbjct: 126 NLINLPKIARDDNNLSKGYGFV---SFGDFESSDAAIANMNGQYLMNKQVSVQYAYKKDG 182
Query: 287 QPQHIGQGVPQPV---------------MPPPMQFRPPPNMPPPPPPQLASAMQRPPPQP 331
+ + G + + +P P P +PP +S P
Sbjct: 183 KGERHGDQAERMLAAQARKHNVRPPTQPLPSPFSGSGTPMVPPAMANGDSSRQISTGPPD 242
Query: 332 MGMG---AQPPVWRQPPPPPQQLLGRPPMPHMSMPPPPP 367
+GMG A P V PPPQ H S+PP P
Sbjct: 243 LGMGRGVATPNVGFSNVPPPQH--------HRSVPPATP 273
>gi|225554276|gb|EEH02576.1| splicing factor 3b subunit 4 [Ajellomyces capsulatus G186AR]
Length = 387
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD ++T+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++++V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|115398490|ref|XP_001214834.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
gi|114191717|gb|EAU33417.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
Length = 349
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/310 (50%), Positives = 203/310 (65%), Gaps = 31/310 (10%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT YVGNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK KS+++GA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPK------IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQIT 185
FS FG ++ PK + RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++
Sbjct: 121 FSRFGNLINIPKASLFSWVARD-DNNLSKGYGFVSFGDFESSDAAIANMNGQYLMNKQVS 179
Query: 186 VSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVP 245
V YAYKKD KGERHG AER+LAA ++R H + P PQ +G G P+
Sbjct: 180 VQYAYKKDGKGERHGDQAERMLAA------QARKHNVRVPAQPL---PPQFSGP-GTPMV 229
Query: 246 PRPYANGAASGPISAVRPPP-------PPPQAAA---FPPMQVAG---QAAWQGQPQHIG 292
P P ANG S P+S P P PPPQ + PP+ +A + P G
Sbjct: 230 PTPMANGDTSRPMSTGPPTPSVGFPNVPPPQTSRPGPPPPVSLANPPPGLPARPPPSQAG 289
Query: 293 QGVPQPVMPP 302
G PQ MPP
Sbjct: 290 YGGPQTFMPP 299
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 101/264 (38%), Gaps = 8/264 (3%)
Query: 109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
D A +++GNLD V + L+++ G IV N + +D T + +G+GF+ + S E ++
Sbjct: 10 DKEATVYVGNLDERVTDSLVWELMLQAGRIV-NVHLPKDRVTQSHQGYGFVEFISEEDAE 68
Query: 169 AAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPP 228
A MNG L + I V+ A K G AE + +P + + F S
Sbjct: 69 YASRIMNGIRLYGKPIRVNKASADKQKSVEIG--AELFVGNLDPMVTEQVLYDTF-SRFG 125
Query: 229 SLQNAPQANGTVGGPVPPRPYANG---AASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQ 285
+L N P+A+ + G + G + QV+ Q A++
Sbjct: 126 NLINIPKASLFSWVARDDNNLSKGYGFVSFGDFESSDAAIANMNGQYLMNKQVSVQYAYK 185
Query: 286 GQPQHIGQGVPQPVMPPPMQFRPPPNMPPPP-PPQLASAMQRPPPQPMGMGAQPPVWRQP 344
+ G M + +P P PPQ + P PM G
Sbjct: 186 KDGKGERHGDQAERMLAAQARKHNVRVPAQPLPPQFSGPGTPMVPTPMANGDTSRPMSTG 245
Query: 345 PPPPQQLLGRPPMPHMSMPPPPPP 368
PP P P P S P PPPP
Sbjct: 246 PPTPSVGFPNVPPPQTSRPGPPPP 269
>gi|255931581|ref|XP_002557347.1| Pc12g04780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581966|emb|CAP80105.1| Pc12g04780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 178/242 (73%), Gaps = 12/242 (4%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GNLD +V++ L+WEL +Q G +VNV++PKDRVT LHQGYGFVEF SEEDA
Sbjct: 8 EQDKEATVYIGNLDERVSDSLVWELMLQVGRIVNVHLPKDRVTQLHQGYGFVEFISEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA K++N I+L+GKPIRVNKAS DK K++++GA LF+GNLDP V E++L+DTFS FG +
Sbjct: 68 EYASKIMNGIRLHGKPIRVNKASADKQKTVEIGAELFVGNLDPMVAEQVLFDTFSRFGNL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PKI RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYKKD KGER
Sbjct: 128 VNPPKIARD-DNNLSKGYGFVSFADFESSDAAIANMNGQYLMNKQVSVQYAYKKDGKGER 186
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPI 258
HG AER+LAA ++R H + P Q APQ GT G +NG S P+
Sbjct: 187 HGDEAERMLAA------QARKH----NAQPPTQQAPQFPGTGPGVSSTPAMSNGDISRPL 236
Query: 259 SA 260
S
Sbjct: 237 ST 238
>gi|242824075|ref|XP_002488188.1| splicing factor 3b subunit 4 [Talaromyces stipitatus ATCC 10500]
gi|218713109|gb|EED12534.1| splicing factor 3b subunit 4 [Talaromyces stipitatus ATCC 10500]
Length = 352
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ F+ASDAAI M+GQYL N++++V YAYK
Sbjct: 121 FSRFGTLLSMPKIARD-DANLSKGYGFVSFADFDASDAAIANMHGQYLMNKEVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|70984076|ref|XP_747559.1| splicing factor 3b subunit 4 [Aspergillus fumigatus Af293]
gi|66845186|gb|EAL85521.1| splicing factor 3b subunit 4 [Aspergillus fumigatus Af293]
gi|159122344|gb|EDP47465.1| splicing factor 3b subunit 4 [Aspergillus fumigatus A1163]
Length = 352
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 165/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N I+LYGKPIRVNKAS DK K++++GA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNGIRLYGKPIRVNKASADKQKAVEIGAELFVGNLDPLVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +V PK+ RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAYK
Sbjct: 121 FSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAAIANMNGQYLMNKQVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|325094983|gb|EGC48293.1| splicing factor 3B [Ajellomyces capsulatus H88]
Length = 387
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 165/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD ++T+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K ++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKMVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++++V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|212546197|ref|XP_002153252.1| splicing factor 3b subunit 4 [Talaromyces marneffei ATCC 18224]
gi|210064772|gb|EEA18867.1| splicing factor 3b subunit 4 [Talaromyces marneffei ATCC 18224]
Length = 351
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVSEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ F+ASDAAI M+GQYL N++++V YAYK
Sbjct: 121 FSRFGTLLSLPKIARD-DANLSKGYGFVSFADFDASDAAIANMHGQYLMNKEVSVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDEAERMLAA------QARKHNV 204
>gi|164659882|ref|XP_001731065.1| hypothetical protein MGL_2064 [Malassezia globosa CBS 7966]
gi|159104963|gb|EDP43851.1| hypothetical protein MGL_2064 [Malassezia globosa CBS 7966]
Length = 227
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 160/204 (78%), Gaps = 6/204 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT YVGNLD +VT+E++WEL +Q GPV ++Y+PKDR++ +HQGY F E+ +E DA
Sbjct: 6 ERNQEATCYVGNLDERVTDEIIWELMLQVGPVAHIYLPKDRISQMHQGYAFAEYCTESDA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA +++N IKLYGKPIRVN +S +K+ +D+GANLF+GNLD VDE+LLYDTF+ FG I+
Sbjct: 66 EYACRIMNGIKLYGKPIRVNMSSNEKQVVDIGANLFVGNLDSGVDERLLYDTFATFGGIL 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GER 198
P+I RDP T S+ +GF+S+DSFE++D AIE++N Q+L NR +TV YA +KD K GER
Sbjct: 126 GAPRIARDPTTNESKNYGFVSFDSFESADGAIESLNNQFLLNRPMTVMYALRKDAKNGER 185
Query: 199 HGTPAERILAANNPSSQKSRPHTL 222
HGT AER++AA Q + H L
Sbjct: 186 HGTQAERLVAA-----QARKNHVL 204
>gi|303322388|ref|XP_003071187.1| Splicing factor 3B subunit 4 , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240110886|gb|EER29042.1| Splicing factor 3B subunit 4 , putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 347
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT YVGNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNQVRLYGKPIRVNKASADKLKAIEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D S+G+GF+S+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|320040614|gb|EFW22547.1| splicing factor 3b subunit 4 [Coccidioides posadasii str. Silveira]
Length = 347
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 166/211 (78%), Gaps = 8/211 (3%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT YVGNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYASRIMNQVRLYGKPIRVNKASADKLKAIEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PK+ RD D S+G+GF+S+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 121 FSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDAIANMNGQYLMNKEISVQYAYK 179
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 180 KDGKGERHGDQAERMLAA------QARKHNV 204
>gi|301097256|ref|XP_002897723.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
gi|262106744|gb|EEY64796.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
Length = 188
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/160 (74%), Positives = 141/160 (88%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT YVGNLD +VTEELLWEL +Q+G V NV++P+D+VT HQ YGFVEFR+E+ A
Sbjct: 7 QRNQDATVYVGNLDDRVTEELLWELMLQSGSVCNVHMPRDKVTGAHQNYGFVEFRTEDCA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+KVLNMI+LYG+ IRV KAS D+K+LDVGANLFIGNLDP+VDEKLLYDTFSAFG IV
Sbjct: 67 EYAVKVLNMIQLYGRVIRVKKASNDRKNLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIV 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
PKIMRDPDT S+GFGF+S+DSFEA+D AIE M+GQYL
Sbjct: 127 ETPKIMRDPDTKASKGFGFVSFDSFEAADLAIECMHGQYL 166
>gi|398394106|ref|XP_003850512.1| hypothetical protein MYCGRDRAFT_46623 [Zymoseptoria tritici IPO323]
gi|339470390|gb|EGP85488.1| hypothetical protein MYCGRDRAFT_46623 [Zymoseptoria tritici IPO323]
Length = 343
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/269 (52%), Positives = 182/269 (67%), Gaps = 24/269 (8%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E+++++T YVGNLD + T+ L+WEL +QAGPV+NV++P+DRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKESTLYVGNLDERCTDALVWELMLQAGPVINVHLPRDRVTQNHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-------LDVGANLFIGNLDPDVDE 125
F SE+DADYA K++N I+++GKPIRVNKAS DK++ VGA LF+GNLD VDE
Sbjct: 61 FGSEDDADYACKIMNQIRVHGKPIRVNKASADKRAGGENGGLGGVGAELFVGNLDSLVDE 120
Query: 126 KLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQIT 185
K+LY+TF FG +V PKI RD D S+G+GF+SY FEASDAAIE M+GQYL N+++T
Sbjct: 121 KVLYETFIRFGQLVAAPKIARD-DANLSKGYGFVSYAGFEASDAAIEHMHGQYLMNKEVT 179
Query: 186 VSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSL---QNAPQANGTVGG 242
V YAYKKD KGERHG AER LAA ++K + P +L QN PQA +
Sbjct: 180 VQYAYKKDGKGERHGDEAERALAAQ---AKKHGVEVAIPALPAALVMPQNTPQAPAAM-- 234
Query: 243 PVPPRPYANGAASGPISAVRPPPPPPQAA 271
NG A+ P+ PPPP AA
Sbjct: 235 --------NGMATTPVGYGMGYPPPPVAA 255
>gi|156102134|ref|XP_001616760.1| spliceosome-associated protein 49 [Plasmodium vivax Sal-1]
gi|148805634|gb|EDL47033.1| spliceosome-associated protein 49, putative [Plasmodium vivax]
Length = 479
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/201 (60%), Positives = 157/201 (78%), Gaps = 2/201 (0%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
H ERN +AT Y+ NLD QV EE+L ELF+Q G V NV++P+D++ H GYGFVE+ E
Sbjct: 12 HIYERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHAGYGFVEYEYE 71
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFG 136
+ +YA KVLNM KL+GKP+R NKASQDK+S DVGANLFIGNLD +VDEK+L+D FS+FG
Sbjct: 72 YECEYAGKVLNMTKLFGKPLRCNKASQDKRSFDVGANLFIGNLDAEVDEKMLFDIFSSFG 131
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
+VT +I+RD + S+G GFISYD+FE+SD AIE MN Q++CN+++ +SYA+KKD+KG
Sbjct: 132 QLVT-VRIIRD-ENDTSKGHGFISYDNFESSDMAIENMNNQFICNKKVHISYAFKKDSKG 189
Query: 197 ERHGTPAERILAANNPSSQKS 217
ERHGT AER +AAN S S
Sbjct: 190 ERHGTAAERFIAANKALSSYS 210
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MT + N Q + A ++GNLD +V E++L+++F G +V V + +D
Sbjct: 83 MTKLFGKPLRCNKASQDKRSFDVGANLFIGNLDAEVDEKMLFDIFSSFGQLVTVRIIRDE 142
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ +G+GF+ + + E +D AI+ +N + K + ++ A +D K
Sbjct: 143 -NDTSKGHGFISYDNFESSDMAIENMNNQFICNKKVHISYAFKKDSK 188
>gi|209882389|ref|XP_002142631.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558237|gb|EEA08282.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 213
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 153/197 (77%), Gaps = 1/197 (0%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q ++NQ+AT Y GNLD +V EELL ELF Q GP+ +VY+P+D+VT H G+GF+EF+
Sbjct: 18 QQIFDKNQEATLYCGNLDNRVDEELLAELFAQTGPIKSVYIPRDKVTGTHSGFGFIEFQQ 77
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
D +YA ++LN +KLYGKPIR +KASQD+K LD+GANLF+GNL PD+DEKLL+D FS F
Sbjct: 78 VLDCEYAQRILNSVKLYGKPIRCSKASQDRKQLDIGANLFVGNLSPDIDEKLLHDIFSLF 137
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G +++ I ++ + + RG+GF+SYDSF +SD AI +NGQ+ NRQITVSYA+K+D K
Sbjct: 138 GNVISTKVIFKENNE-DERGYGFVSYDSFNSSDNAIATLNGQFFGNRQITVSYAFKQDCK 196
Query: 196 GERHGTPAERILAANNP 212
GERHG+ AER+LA+ N
Sbjct: 197 GERHGSTAERLLASKNT 213
>gi|389585768|dbj|GAB68498.1| spliceosome-associated protein 49, partial [Plasmodium cynomolgi
strain B]
Length = 229
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 155/194 (79%), Gaps = 2/194 (1%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
H ERN +AT Y+ NLD QV EE+L ELF+Q G V NV++P+D++ H GYGFVE+ E
Sbjct: 12 HIYERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHAGYGFVEYEYE 71
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFG 136
+ +YA KVLNM KL+GKP+R NKASQDK++ DVGANLFIGNLD +VDEK+L+D FS+FG
Sbjct: 72 YECEYAGKVLNMTKLFGKPLRCNKASQDKRTFDVGANLFIGNLDAEVDEKMLFDIFSSFG 131
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
+VT +I+R+ D S+G GFISYD+FE+SD AIE MN Q++CN+++ +SYA+KKD+KG
Sbjct: 132 QVVT-VRIIRNEDD-TSKGHGFISYDNFESSDMAIENMNNQFICNKKVHISYAFKKDSKG 189
Query: 197 ERHGTPAERILAAN 210
ERHGT AER +AAN
Sbjct: 190 ERHGTAAERFIAAN 203
>gi|425773760|gb|EKV12094.1| Splicing factor 3b subunit 4 [Penicillium digitatum PHI26]
gi|425782322|gb|EKV20241.1| Splicing factor 3b subunit 4 [Penicillium digitatum Pd1]
Length = 366
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 160/199 (80%), Gaps = 10/199 (5%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GNLD +V++ L+WEL +QAG +VNV++PKDRVT LHQGYGFVEF SEEDA
Sbjct: 8 EQDKEATVYIGNLDERVSDSLVWELMLQAGRIVNVHLPKDRVTQLHQGYGFVEFISEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA K++N I+L+GKPIRVNKAS DK K++++GA LF+GNLDP V E++L+DTFS FG +
Sbjct: 68 EYASKIMNGIRLHGKPIRVNKASADKQKAVEIGAELFVGNLDPMVAEQVLFDTFSRFGNL 127
Query: 139 VTNPKIM--------RDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
V PK++ RD D S+G+GF+S+ FE+SDAAI MNGQYL N+Q++V YAY
Sbjct: 128 VNPPKLISLLSSQIARD-DNNLSKGYGFVSFADFESSDAAITNMNGQYLMNKQVSVQYAY 186
Query: 191 KKDTKGERHGTPAERILAA 209
KKD KGERHG AER+LAA
Sbjct: 187 KKDGKGERHGDEAERMLAA 205
>gi|116198017|ref|XP_001224820.1| hypothetical protein CHGG_07164 [Chaetomium globosum CBS 148.51]
gi|88178443|gb|EAQ85911.1| hypothetical protein CHGG_07164 [Chaetomium globosum CBS 148.51]
Length = 529
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 151/192 (78%), Gaps = 2/192 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T+ELL EL Q GPV V++P+DRV+ HQGYGFVEF + A
Sbjct: 134 EQNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASA 193
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA KVLN I+++GKPIRVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 194 EYASKVLNGIRIWGKPIRVNKASADKQKTVDIGAELFINNLDPQVDEKILYDTFSQFGQI 253
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P I+RD D S+G+GF+S+DSFEASDAA+ MNGQYL ++ ITV YAYKKD KGER
Sbjct: 254 LRQPNIVRD-DNNISKGYGFVSFDSFEASDAAVGTMNGQYLLSKSITVEYAYKKDGKGER 312
Query: 199 HGTPAERILAAN 210
HG AER LAA
Sbjct: 313 HGDEAERKLAAE 324
>gi|367025735|ref|XP_003662152.1| hypothetical protein MYCTH_2302391 [Myceliophthora thermophila ATCC
42464]
gi|347009420|gb|AEO56907.1| hypothetical protein MYCTH_2302391 [Myceliophthora thermophila ATCC
42464]
Length = 404
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 150/191 (78%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T ELL EL Q GPV V++P+DRV+ HQGYGFVEF + A
Sbjct: 6 EQNKDATVYVGNIDERFTHELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA KVLN I+++GKPIRVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 66 EYASKVLNGIRIWGKPIRVNKASADKQKTVDIGAELFINNLDPQVDEKILYDTFSQFGQI 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P ++RD D S+G+GF+S+DSFEASDAAI MNGQYL ++ ITV YAYKKD KGER
Sbjct: 126 LRQPNVVRD-DNNISKGYGFVSFDSFEASDAAIATMNGQYLLSKAITVEYAYKKDGKGER 184
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 185 HGDEAERKLAA 195
>gi|84995240|ref|XP_952342.1| splicing factor 3b subunit 4 [Theileria annulata strain Ankara]
gi|65302503|emb|CAI74610.1| splicing factor 3b subunit 4, putative [Theileria annulata]
Length = 290
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 154/192 (80%), Gaps = 3/192 (1%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
RNQ+AT Y+GNLD Q EELLWE F+QAG V ++ +P+D+VT HQG+GFVE+ +E DAD
Sbjct: 14 RNQEATLYIGNLDLQADEELLWEFFMQAGRVKSINIPRDKVTGQHQGFGFVEYETETDAD 73
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
YA+K+LN +KLY KP+++NKAS+DK+ +VGA LF+GNLD +VDE+LL+DTFSAFG +++
Sbjct: 74 YALKILNFVKLYHKPLKLNKASKDKEIREVGAKLFVGNLDDEVDERLLHDTFSAFGRVLS 133
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K++R +G + + +S+D FEASDAA+ MNGQ+LCN+ I VSYAYK+DTKGERHG
Sbjct: 134 -AKLVRSETSGKT--YAIVSFDDFEASDAALRTMNGQFLCNKPIHVSYAYKEDTKGERHG 190
Query: 201 TPAERILAANNP 212
AER++A+ P
Sbjct: 191 GAAERLIASKRP 202
>gi|367038731|ref|XP_003649746.1| hypothetical protein THITE_2108627 [Thielavia terrestris NRRL 8126]
gi|346997007|gb|AEO63410.1| hypothetical protein THITE_2108627 [Thielavia terrestris NRRL 8126]
Length = 399
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/253 (54%), Positives = 171/253 (67%), Gaps = 8/253 (3%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T+ELL EL Q GPV V++P+DRV+ HQGYGFVEF + A
Sbjct: 6 EQNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA KVLN I+++GKPIRVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 66 EYAAKVLNGIRIWGKPIRVNKASADKQKAVDIGAELFINNLDPQVDEKILYDTFSQFGQI 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P I+RD + S+G+GF+S+DSFEASDAA+ MNGQYL ++ ITV YAYKKD KGER
Sbjct: 126 LRQPNIVRD-ENHISKGYGFVSFDSFEASDAALSTMNGQYLLSKAITVEYAYKKDGKGER 184
Query: 199 HGTPAERILAANNPS-----SQKSRPHTLFASGPPSLQNAPQANGTV-GGPVPPRPYANG 252
HG AER LAA Q+ P + P S P T G VP
Sbjct: 185 HGDEAERKLAAEGKKHNILPEQQPLPPAFHMTAPISAAAPPVGAPTRPGAAVPSTVNGPA 244
Query: 253 AASGPISAVRPPP 265
A + P+SA PPP
Sbjct: 245 AVAPPVSATVPPP 257
>gi|347841404|emb|CCD55976.1| hypothetical protein [Botryotinia fuckeliana]
Length = 380
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 119/189 (62%), Positives = 154/189 (81%), Gaps = 2/189 (1%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GN+D +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++L+GKPIRVNKAS DK K+++VGA LFIGNLDP VDEK LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLFGKPIRVNKASADKQKTVEVGAELFIGNLDPMVDEKTLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD ++ S+G+GF+SY +FEASD AI MNGQYL N+ I+V YAYK
Sbjct: 121 FSRFGSLISPPKIARD-ESSLSKGYGFVSYANFEASDDAIANMNGQYLMNKDISVQYAYK 179
Query: 192 KDTKGERHG 200
KD KGERHG
Sbjct: 180 KDGKGERHG 188
>gi|449301395|gb|EMC97406.1| hypothetical protein BAUCODRAFT_33122 [Baudoinia compniacensis UAMH
10762]
Length = 389
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 157/210 (74%), Gaps = 14/210 (6%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G ++++D+T YVGNLD + T+ L+WEL +QAGPV+NV++PKDRVT HQGYGFVE
Sbjct: 1 MAGARHWDQDKDSTLYVGNLDERCTDSLVWELMLQAGPVINVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL-------------DVGANLFIGNL 119
F SEEDADYA K++N I+L+GKPIRVNKAS D++ VGA LF+GNL
Sbjct: 61 FGSEEDADYAAKIMNQIRLWGKPIRVNKASADRRGAPGTVEGGGLGGGQGVGAELFVGNL 120
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D VDEK+L++TFS FG ++ PK+ RD D S+G+GFISY SFEASD AI M+GQYL
Sbjct: 121 DSMVDEKILFETFSRFGPLIAPPKVARD-DANLSKGYGFISYASFEASDDAIANMHGQYL 179
Query: 180 CNRQITVSYAYKKDTKGERHGTPAERILAA 209
N+++TV YAYKKD KGERHG PAER LAA
Sbjct: 180 MNKEVTVQYAYKKDGKGERHGDPAERALAA 209
>gi|154294661|ref|XP_001547770.1| hypothetical protein BC1G_13457 [Botryotinia fuckeliana B05.10]
Length = 381
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 152/182 (83%), Gaps = 2/182 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVEF SEEDA
Sbjct: 9 EQDKEATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDA 68
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA +++N ++L+GKPIRVNKAS DK K+++VGA LFIGNLDP VDEK LYDTFS FG +
Sbjct: 69 EYAARIMNQVRLFGKPIRVNKASADKQKTVEVGAELFIGNLDPMVDEKTLYDTFSRFGSL 128
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PKI RD ++ S+G+GF+SY +FEASD AI MNGQYL N+ I+V YAYKKD KGER
Sbjct: 129 ISPPKIARD-ESSLSKGYGFVSYANFEASDDAIANMNGQYLMNKDISVQYAYKKDGKGER 187
Query: 199 HG 200
HG
Sbjct: 188 HG 189
>gi|156048690|ref|XP_001590312.1| hypothetical protein SS1G_09077 [Sclerotinia sclerotiorum 1980]
gi|154693473|gb|EDN93211.1| hypothetical protein SS1G_09077 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 380
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 152/182 (83%), Gaps = 2/182 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVEF SEEDA
Sbjct: 7 EQDKEATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA +++N ++L+GKPIRVNKAS DK K+++VGA LFIGNLDP VDEK LYDTFS FG +
Sbjct: 67 EYAARIMNQVRLFGKPIRVNKASADKQKTVEVGAELFIGNLDPMVDEKTLYDTFSRFGSL 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PKI RD ++ S+G+GF+SY +FEASD AI MNGQYL N+ I+V YAYKKD KGER
Sbjct: 127 ISPPKIARD-ESSLSKGYGFVSYANFEASDDAIANMNGQYLMNKDISVQYAYKKDGKGER 185
Query: 199 HG 200
HG
Sbjct: 186 HG 187
>gi|124808629|ref|XP_001348367.1| spliceosome-associated protein, putative [Plasmodium falciparum
3D7]
gi|23497260|gb|AAN36806.1|AE014819_17 spliceosome-associated protein, putative [Plasmodium falciparum
3D7]
Length = 484
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 153/194 (78%), Gaps = 2/194 (1%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
H ERN +AT Y+ NLD QV EE+L ELF+Q G V NV++P+D++ H GYGFVE+ E
Sbjct: 12 HIYERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGYHAGYGFVEYEYE 71
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFG 136
+ +YA +LNM KL+GK +R NKA+QDK+S DVGANLFIGNLD +VDEK+L+D FS+FG
Sbjct: 72 YECEYAANILNMTKLFGKALRCNKATQDKRSFDVGANLFIGNLDDEVDEKMLFDIFSSFG 131
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
I+T K+MR+ D S+G GFISYD+FE+SD AIE MN Q++CN+++ +SYA+KKD+KG
Sbjct: 132 QIMT-VKVMRNED-DTSKGHGFISYDNFESSDLAIENMNNQFICNKKVHISYAFKKDSKG 189
Query: 197 ERHGTPAERILAAN 210
ERHGT AER +AAN
Sbjct: 190 ERHGTAAERFIAAN 203
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MT + N Q + A ++GNLD +V E++L+++F G ++ V V ++
Sbjct: 83 MTKLFGKALRCNKATQDKRSFDVGANLFIGNLDDEVDEKMLFDIFSSFGQIMTVKVMRNE 142
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA 101
+ +G+GF+ + + E +D AI+ +N + K + ++ A
Sbjct: 143 -DDTSKGHGFISYDNFESSDLAIENMNNQFICNKKVHISYA 182
>gi|71030596|ref|XP_764940.1| spliceosome associated protein [Theileria parva strain Muguga]
gi|68351896|gb|EAN32657.1| spliceosome associated protein, putative [Theileria parva]
Length = 290
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 154/194 (79%), Gaps = 3/194 (1%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
RNQ+AT Y+GNLD Q EELLWE F+QAG V ++ VP+D+VT HQG+GFVE+ +E DAD
Sbjct: 14 RNQEATLYIGNLDLQADEELLWEFFMQAGRVKSINVPRDKVTGQHQGFGFVEYETEVDAD 73
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
YA+K+LN +KLY KP+++NKAS+DK+ +VGA LF+GNLD +VDE+LL+DTFSAFG +++
Sbjct: 74 YALKILNFVKLYHKPLKLNKASKDKEIREVGAKLFVGNLDDEVDERLLHDTFSAFGRVLS 133
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K++R +G + + +S+D FEASDAA+ MNGQ+LCN+ I VSYAYK+DTKGERHG
Sbjct: 134 -AKMVRSETSGKT--YAIVSFDDFEASDAALRTMNGQFLCNKPIHVSYAYKEDTKGERHG 190
Query: 201 TPAERILAANNPSS 214
AER++A+ P
Sbjct: 191 GAAERLIASKRPKD 204
>gi|336257859|ref|XP_003343751.1| NAM8/MRE2 protein [Sordaria macrospora k-hell]
gi|380091622|emb|CCC10754.1| putative NAM8/MRE2 protein [Sordaria macrospora k-hell]
Length = 390
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 150/191 (78%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T+ELL EL Q GPV V++P+DRV+ HQGYGFVEF + A
Sbjct: 6 EQNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA KVLN I+++GKPIRVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 66 EYAAKVLNGIRIWGKPIRVNKASADKQKTVDIGAELFINNLDPQVDEKILYDTFSQFGQI 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P I+RD D S+G+GF+S+ SFEASDAA MNGQYL ++QITV YAYKKD KGER
Sbjct: 126 LRQPNIVRD-DNNISKGYGFVSFGSFEASDAARATMNGQYLLSKQITVEYAYKKDGKGER 184
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 185 HGDEAERKLAA 195
>gi|63054583|ref|NP_594001.2| U2 snRNP-associated RNA-binding protein Sap49 [Schizosaccharomyces
pombe 972h-]
gi|26399889|sp|O14102.2|SAP49_SCHPO RecName: Full=Spliceosome-associated protein 49
gi|159883972|emb|CAC19730.2| U2 snRNP-associated RNA-binding protein Sap49 [Schizosaccharomyces
pombe]
Length = 335
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/182 (62%), Positives = 151/182 (82%), Gaps = 2/182 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RNQDAT Y+GNLD +VT+ +L+EL +QAGPVVN+++P+DRV N H G+GF EF E+D
Sbjct: 6 DRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDV 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA ++LN +KL+GKPIRVN+ASQD+ + +GANLF+GNLDP VDE++LYDTFSA G +
Sbjct: 66 EYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQL 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L N+ ITVSYA+K++ KGER
Sbjct: 126 VKAPQVARD-ENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGER 184
Query: 199 HG 200
HG
Sbjct: 185 HG 186
>gi|171693953|ref|XP_001911901.1| hypothetical protein [Podospora anserina S mat+]
gi|170946925|emb|CAP73729.1| unnamed protein product [Podospora anserina S mat+]
Length = 403
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 150/191 (78%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T+ELL EL Q GPV V++P DRVT HQGYGF+EF + E A
Sbjct: 17 EQNKDATVYVGNIDERFTQELLTELMTQVGPVRQVHMPLDRVTRNHQGYGFIEFDTPESA 76
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA K LN I+++GKP+RVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 77 EYAAKCLNGIRVHGKPLRVNKASADKQKTVDIGAELFINNLDPQVDEKILYDTFSTFGQI 136
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P I+RD D S+G+GF+S+DSFEASDAA+ MNGQYL ++ I+V YAYKKD KGER
Sbjct: 137 LRQPNIVRD-DNNISKGYGFVSFDSFEASDAALANMNGQYLLSKAISVDYAYKKDGKGER 195
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 196 HGDEAERRLAA 206
>gi|336472211|gb|EGO60371.1| hypothetical protein NEUTE1DRAFT_119564 [Neurospora tetrasperma
FGSC 2508]
gi|350294569|gb|EGZ75654.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 390
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 150/191 (78%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T+ELL EL Q GPV V++P+DRV+ HQGYGFVEF + A
Sbjct: 6 EQNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA KVLN I+++GKPIRVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 66 EYAAKVLNGIRIWGKPIRVNKASADKQKTVDIGAELFINNLDPQVDEKILYDTFSQFGQI 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P I+RD D S+G+GF+S+ SFEASDAA MNGQYL ++QITV YAYKKD KGER
Sbjct: 126 LRQPNIVRD-DNNISKGYGFVSFGSFEASDAARATMNGQYLLSKQITVEYAYKKDGKGER 184
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 185 HGDEAERKLAA 195
>gi|85101406|ref|XP_961142.1| hypothetical protein NCU04182 [Neurospora crassa OR74A]
gi|11595719|emb|CAC18197.1| probable spliceosome-associated protein SAP-49 [Neurospora crassa]
gi|28922682|gb|EAA31906.1| hypothetical protein NCU04182 [Neurospora crassa OR74A]
Length = 390
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 150/191 (78%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T+ELL EL Q GPV V++P+DRV+ HQGYGFVEF + A
Sbjct: 6 EQNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASA 65
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA KVLN I+++GKPIRVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 66 EYAAKVLNGIRVWGKPIRVNKASADKQKTVDIGAELFINNLDPQVDEKILYDTFSQFGQI 125
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ P I+RD D S+G+GF+S+ SFEASDAA MNGQYL ++QITV YAYKKD KGER
Sbjct: 126 LRQPNIVRD-DNNISKGYGFVSFGSFEASDAARATMNGQYLLSKQITVEYAYKKDGKGER 184
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 185 HGDEAERKLAA 195
>gi|330799143|ref|XP_003287607.1| hypothetical protein DICPUDRAFT_151707 [Dictyostelium purpureum]
gi|325082393|gb|EGC35876.1| hypothetical protein DICPUDRAFT_151707 [Dictyostelium purpureum]
Length = 266
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/270 (50%), Positives = 180/270 (66%), Gaps = 33/270 (12%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN DA V +LDP VTE LL ELF+QA PVV V++PKD++T H G +VEF+S DA
Sbjct: 8 ERNHDACLIVRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHTGRAYVEFQSSADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+KV+ ++L+ K I++ K S DK +D+GANLFIGNLD DVDE++L+DTFS FG I+
Sbjct: 68 EYALKVMKFVRLFNKEIKIKKESTDK--IDIGANLFIGNLDTDVDERILFDTFSRFGTIL 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD + G S+GFGFIS+DSF+ASDAAIE++NGQ+LCN+ I+VSYA KKD+ E+H
Sbjct: 126 FTPKIMRD-ENGQSKGFGFISFDSFDASDAAIESLNGQFLCNKPISVSYARKKDS-NEKH 183
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPIS 259
G+ AERI+AA+ + ++ + PP L T GG +PP P P
Sbjct: 184 GSKAERIIAASRSAGGFNQSGAI----PPPL--------TAGGLMPPPP--------PSF 223
Query: 260 AVRPPPPPPQAAA---------FPPMQVAG 280
+ + PP PPQ + FPP Q G
Sbjct: 224 STQQPPLPPQFSQPPNFNQPSPFPPQQHWG 253
>gi|453083918|gb|EMF11963.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 387
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 158/208 (75%), Gaps = 12/208 (5%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E+++D+T Y+GNLD + T+ L+WEL +QAGPV+NV++PKDRVT HQGYGFVE
Sbjct: 1 MSGSRHWEQDKDSTLYIGNLDERCTDPLIWELMLQAGPVINVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-----------LDVGANLFIGNLDP 121
F SE+DADYA K++N I+LYGKPIRVNKAS D++ VGA LF+GNLD
Sbjct: 61 FGSEDDADYACKIMNQIRLYGKPIRVNKASADRRGPNGEGGGLGGGAGVGAELFVGNLDN 120
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
VDEK+LY+TFS FG +V PK+ RD ++ S+G+GF+SY +FEASD AIE M+GQYL N
Sbjct: 121 MVDEKVLYETFSRFGPLVAAPKVARD-ESNLSKGYGFVSYAAFEASDQAIEHMHGQYLMN 179
Query: 182 RQITVSYAYKKDTKGERHGTPAERILAA 209
++ITV YAYKKD KGERHG AER LAA
Sbjct: 180 KEITVQYAYKKDGKGERHGDDAERALAA 207
>gi|281204013|gb|EFA78209.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 252
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 152/190 (80%), Gaps = 3/190 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN DA V +LDPQVTE LLWEL +QA PVV V++PKD++T H G ++EF+SE DA
Sbjct: 8 ERNLDACIQVRDLDPQVTESLLWELMIQAAPVVKVFMPKDKLTQQHSGRAYIEFQSEADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DY ++++N +KL+G+P+++ K ++DK +DVGANLFIGNLD +VDEKLL+DTF FG I+
Sbjct: 68 DYVMRIMNYVKLFGRPLKLKKGNKDK--IDVGANLFIGNLDGEVDEKLLHDTFCQFGTII 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PKIMRD +G S+GFGF+SYD+F +SD AIEAMNGQ+LCN+ I+V+YA KKD+ E+H
Sbjct: 126 QPPKIMRDTSSGVSKGFGFVSYDNFTSSDMAIEAMNGQFLCNKPISVTYARKKDST-EKH 184
Query: 200 GTPAERILAA 209
G AER++AA
Sbjct: 185 GGHAERLIAA 194
>gi|219130389|ref|XP_002185349.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403264|gb|EEC43218.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 328
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 162/223 (72%), Gaps = 17/223 (7%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
RNQDAT YVGNLD +EELL ELF Q G V +VY+PKD+++ H GYGFVE+ DA
Sbjct: 9 HRNQDATVYVGNLDQACSEELLTELFSQVGRVASVYMPKDKLSGQHNGYGFVEYLDAVDA 68
Query: 80 DYAIKVLNMIKLYGKPIRVNKAS----QDKKSLDVGANLFIGNLDP-DVDEKLLYDTFSA 134
DYA+ +L+M+KL+G+P+RV+K+S + + S D+GANLFIGN+DP DV+E+LLY+TF+A
Sbjct: 69 DYAMTILHMMKLFGRPVRVSKSSLNDEEGRHSRDIGANLFIGNVDPIDVNEQLLYETFTA 128
Query: 135 FGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDT 194
FG +V P I RD T S+GF F+SYDSF+A+D AIE MNGQYL NRQI V+YA+KKD
Sbjct: 129 FGTLVRTPNIARDEATQQSKGFAFLSYDSFQAADMAIELMNGQYLGNRQIQVNYAWKKDA 188
Query: 195 KG----ERHGTPAERILAANNPSSQK--------SRPHTLFAS 225
G ERHG+ AER+LA ++Q+ RP++ FAS
Sbjct: 189 NGNITNERHGSRAERMLAEAKRANQQLGPSGPTLFRPNSTFAS 231
>gi|346974668|gb|EGY18120.1| splicing factor 3B subunit 4 [Verticillium dahliae VdLs.17]
Length = 498
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 155/191 (81%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+++DAT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKDATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPGDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N +KLYGK +RVNKAS DK K +VGA LF+GNLDP VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGVKLYGKSLRVNKASADKQKQAEVGAELFVGNLDPMVDEKILYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+T PK+ R+ D+GNS+GFGFIS+ FE+SDAA+E ++GQYL +++++V YA+KKD KGER
Sbjct: 128 LTLPKVARE-DSGNSKGFGFISFADFESSDAAVENLHGQYLLSKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 187 HGDAAERELAA 197
>gi|320587367|gb|EFW99847.1| splicing factor 3b subunit 4 [Grosmannia clavigera kw1407]
Length = 414
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 156/198 (78%), Gaps = 3/198 (1%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G+H E+N++AT YVGNLD + +E L+WEL Q GPVVNV++P DRV+ LHQG+GFVE
Sbjct: 1 MSGRHW-EQNKEATVYVGNLDERFSEPLMWELMTQMGPVVNVHMPMDRVSRLHQGFGFVE 59
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F + E A+YA + LN I+LYGKP+RVNKAS D+ ++ ++GA LF+ NLDP VDEK+LYDT
Sbjct: 60 FDTPESAEYASRTLNGIRLYGKPVRVNKASADRQRAAEIGAELFVNNLDPQVDEKILYDT 119
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
F+ FG +V P ++RD + S+G+GF+S+DSF+ASD A +AM GQYL ++QI+V YAYK
Sbjct: 120 FAQFGRLVAPPNVVRDQNN-ISKGYGFVSFDSFDASDTARDAMQGQYLLSKQISVEYAYK 178
Query: 192 KDTKGERHGTPAERILAA 209
KD KGERHG AER LAA
Sbjct: 179 KDGKGERHGDEAERKLAA 196
>gi|389644502|ref|XP_003719883.1| splicing factor 3B subunit 4 [Magnaporthe oryzae 70-15]
gi|351639652|gb|EHA47516.1| splicing factor 3B subunit 4 [Magnaporthe oryzae 70-15]
gi|440470016|gb|ELQ39105.1| splicing factor 3B subunit 4 [Magnaporthe oryzae Y34]
gi|440486255|gb|ELQ66139.1| splicing factor 3B subunit 4 [Magnaporthe oryzae P131]
Length = 407
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 150/191 (78%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT YVGNLD + E L+WE+ Q GPVVN+++P DRV+ HQGYGFVEF + E A
Sbjct: 7 EQNKEATVYVGNLDERFGEALMWEMMTQMGPVVNLHMPMDRVSRTHQGYGFVEFDTPESA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA + LN I+++GK IRVNKAS DK K+ ++GA LF+ NLDP VDEK+L+DTFS FG +
Sbjct: 67 DYAARALNGIRVFGKVIRVNKASADKQKTAEIGAELFVNNLDPQVDEKILFDTFSRFGQL 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
VT P ++RD + S+G+GF+++DSFEASD A + MNGQYL ++QITV YAYKKD KGER
Sbjct: 127 VTPPNVVRDANN-ISKGYGFVNFDSFEASDTARDTMNGQYLLSKQITVEYAYKKDGKGER 185
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 186 HGDEAERKLAA 196
>gi|402078874|gb|EJT74139.1| splicing factor 3B subunit 4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 409
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 149/191 (78%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT YVGNLD + E L+WE+ Q GPVVN+++P DRV+ HQGYGFVEF S E A
Sbjct: 7 EQNKEATIYVGNLDERFGESLMWEMMTQMGPVVNLHMPMDRVSRTHQGYGFVEFDSPESA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA + LN I++YGK IRVNKAS DK ++ ++GA LF+ NLDP VDEK L+DTFS FG +
Sbjct: 67 DYAARALNGIRVYGKVIRVNKASADKQRAAEIGAELFVNNLDPQVDEKTLFDTFSRFGQL 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
VT P ++RD + S+G+GF+++DSFEASD A + MNGQYL ++QITV YAYKKD KGER
Sbjct: 127 VTPPNVVRDANN-ISKGYGFVNFDSFEASDQARDTMNGQYLLSKQITVEYAYKKDGKGER 185
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 186 HGDDAERKLAA 196
>gi|82914993|ref|XP_728927.1| splicing factor 3b subunit 4 [Plasmodium yoelii yoelii 17XNL]
gi|23485610|gb|EAA20492.1| splicing factor 3b subunit 4 [Plasmodium yoelii yoelii]
Length = 415
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 153/193 (79%), Gaps = 2/193 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN +AT Y+ NLD QV EE+L ELF+Q G V NV++P+D++ H GYGFVE+ E +
Sbjct: 15 ERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYEC 74
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA KVLNM +L+GKP+R NKA+QDKKS DVGANLFIGNLD +V+EK+L+D FS+FG ++
Sbjct: 75 EYAGKVLNMTRLFGKPLRCNKATQDKKSFDVGANLFIGNLDTEVEEKMLFDIFSSFGQVI 134
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ K++R+ D S+G GFISYD+FE+SD AIE MN Q++CN+++ +SYA+KK KGERH
Sbjct: 135 S-VKVVRNEDDT-SKGHGFISYDNFESSDLAIENMNNQFICNKKVHISYAFKKGFKGERH 192
Query: 200 GTPAERILAANNP 212
GT AER +AAN P
Sbjct: 193 GTAAERFIAANKP 205
>gi|452982549|gb|EME82308.1| hypothetical protein MYCFIDRAFT_211591 [Pseudocercospora fijiensis
CIRAD86]
Length = 391
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 152/198 (76%), Gaps = 11/198 (5%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E+++D+T Y+GNLD + ++ L+WEL +QAGPV+NV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKDSTLYIGNLDERCSDALVWELMLQAGPVINVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK----------SLDVGANLFIGNLDPD 122
F SE+DADYA+K++N I+L+GKPIRVNKAS DK+ VGA LF+GNLD
Sbjct: 61 FGSEDDADYAVKIMNQIRLWGKPIRVNKASADKRGGENGAGLGGGQGVGAELFVGNLDSM 120
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
VDEK+LYDTFS FG ++ PK+ RD D S+G+GFISY +FE+SD AIE M+GQ+L N+
Sbjct: 121 VDEKVLYDTFSRFGPLLATPKVARD-DANLSKGYGFISYSTFESSDEAIEHMHGQFLMNK 179
Query: 183 QITVSYAYKKDTKGERHG 200
+ITV YAYKKD KGERHG
Sbjct: 180 EITVQYAYKKDGKGERHG 197
>gi|68073863|ref|XP_678846.1| spliceosome-associated protein [Plasmodium berghei strain ANKA]
gi|56499442|emb|CAH97651.1| spliceosome-associated protein, putative [Plasmodium berghei]
Length = 366
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 152/191 (79%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN +AT Y+ NLD QV EE+L ELF+Q G V NV++P+D++ H GYGFVE+ E +
Sbjct: 15 ERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYEC 74
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA KVLNM +L+GKP+R NKA+QDKKS DVGANLFIGNLD +V+EK+L+D FS+FG ++
Sbjct: 75 EYAGKVLNMTRLFGKPLRCNKATQDKKSFDVGANLFIGNLDTEVEEKMLFDIFSSFGQVI 134
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ KI+R+ D S+G GFISYD+FE+SD AIE MN Q++CN+++ +SYA+KK KGERH
Sbjct: 135 S-VKIVRNEDDT-SKGHGFISYDNFESSDLAIENMNNQFICNKKVHISYAFKKGFKGERH 192
Query: 200 GTPAERILAAN 210
GT AER +AAN
Sbjct: 193 GTAAERFIAAN 203
>gi|70948340|ref|XP_743694.1| spliceosome-associated protein [Plasmodium chabaudi chabaudi]
gi|56523315|emb|CAH77774.1| spliceosome-associated protein, putative [Plasmodium chabaudi
chabaudi]
Length = 394
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 152/191 (79%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN +AT Y+ NLD QV EE+L ELF+Q G V NV++P+D++ H GYGFVE+ E +
Sbjct: 15 ERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYEC 74
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA KVLNM +L+GKP+R NKA+QDKKS DVGANLFIGNLD +V+EK+L+D FS+FG ++
Sbjct: 75 EYAGKVLNMTRLFGKPLRCNKATQDKKSFDVGANLFIGNLDTEVEEKMLFDIFSSFGQVI 134
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ KI+R+ D S+G GFISYD+FE+SD AIE MN Q++CN+++ +SYA+KK KGERH
Sbjct: 135 S-VKIVRNED-DTSKGHGFISYDNFESSDLAIENMNNQFICNKKVHISYAFKKGFKGERH 192
Query: 200 GTPAERILAAN 210
GT AER +AAN
Sbjct: 193 GTAAERFIAAN 203
>gi|302421316|ref|XP_003008488.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
gi|261351634|gb|EEY14062.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
Length = 295
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 158/202 (78%), Gaps = 2/202 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+++DAT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 61 EQDKDATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPSDA 120
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N +KLYGK +RVNKAS DK K +VGA LF+GNLDP VDEK+LYDTFS FG +
Sbjct: 121 EYAANVMNGVKLYGKSLRVNKASADKQKQAEVGAELFVGNLDPMVDEKILYDTFSRFGPL 180
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+T PK+ R+ D+GNS+GFGFIS+ FE+SDAA+E ++GQYL +++++V YA+KKD KGER
Sbjct: 181 LTLPKVARE-DSGNSKGFGFISFADFESSDAAVENLHGQYLLSKEVSVQYAFKKDGKGER 239
Query: 199 HGTPAERILAANNPSSQKSRPH 220
HG AER A + P + + H
Sbjct: 240 HGDAAERNAALHVPRANDAMGH 261
>gi|340522320|gb|EGR52553.1| predicted protein [Trichoderma reesei QM6a]
Length = 386
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 155/191 (81%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 3 EQDKEATVYIGNIDERATPAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADA 62
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK K+ +VGA LFIGNLDP VDEK+LYDTFS FG +
Sbjct: 63 EYAANVMNGIKLYGKSLRVNKASADKQKAAEVGAELFIGNLDPMVDEKILYDTFSRFGPL 122
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ R+ D+G S+GFGF+SY FE+SDAAI ++GQY+ +++++V YA+KKD KGER
Sbjct: 123 LSIPKVARE-DSGASKGFGFVSYGDFESSDAAIANLHGQYILSKEVSVQYAFKKDGKGER 181
Query: 199 HGTPAERILAA 209
HG PAER LAA
Sbjct: 182 HGDPAERALAA 192
>gi|358389660|gb|EHK27252.1| hypothetical protein TRIVIDRAFT_229059 [Trichoderma virens Gv29-8]
Length = 385
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/195 (57%), Positives = 155/195 (79%), Gaps = 2/195 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKEATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK K+ +VGA LFIGNLDP VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGIKLYGKSLRVNKASADKQKAAEVGAELFIGNLDPMVDEKILYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ R+ D+G S+GFGF+SY FE+SDAAI ++GQY+ +++++V YA+KKD KGER
Sbjct: 128 LSIPKVARE-DSGASKGFGFVSYGDFESSDAAISNLHGQYILSKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILAANNPS 213
HG AER LAA S
Sbjct: 187 HGDQAERALAAQAKS 201
>gi|310792398|gb|EFQ27925.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 361
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 154/191 (80%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+++DAT Y+GN+D + + +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKDATIYIGNIDERASPAMVYEVMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK K +VGA LF+GNLDP VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGIKLYGKSLRVNKASADKQKQAEVGAELFVGNLDPMVDEKILYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+T PK+ R+ D+GNS+GFGFISY FE+SDAAI ++GQY+ +++++V YA+KKD KGER
Sbjct: 128 ITLPKVARE-DSGNSKGFGFISYADFESSDAAIANLHGQYILSKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 187 HGDAAERELAA 197
>gi|429859260|gb|ELA34048.1| splicing factor 3b subunit 4 [Colletotrichum gloeosporioides Nara
gc5]
Length = 363
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 154/191 (80%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+++DAT Y+GN+D + + +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKDATIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK K +VGA LF+GNLDP VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGIKLYGKSLRVNKASADKQKQAEVGAELFVGNLDPMVDEKILYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V+ PK+ R+ D+GNS+GFGFISY FE+SDAAI ++GQY+ +++++V YA+KKD KGER
Sbjct: 128 VSLPKVARE-DSGNSKGFGFISYADFESSDAAIANLHGQYIASKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 187 HGDAAERELAA 197
>gi|407922777|gb|EKG15869.1| hypothetical protein MPH_06834 [Macrophomina phaseolina MS6]
Length = 379
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 149/183 (81%), Gaps = 3/183 (1%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G+H E++++AT YVGNLD +VT+ L+WEL +Q G + NV++PKDRVT HQGYGFVEF+
Sbjct: 5 GRH-WEQDKEATVYVGNLDERVTDRLVWELMLQVGRIQNVHLPKDRVTQTHQGYGFVEFQ 63
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFS 133
SEE+ADYA K++N I+LYGKPIRVNKAS DK K+++VGA LF+GNLDP VDEK+L+D FS
Sbjct: 64 SEEEADYAAKIMNQIRLYGKPIRVNKASADKQKTVEVGAELFVGNLDPMVDEKVLFDCFS 123
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG +V+ PK+ RD + S+G+GF+S+ +FE+SD AI MNGQYL N++I+V YAYKKD
Sbjct: 124 RFGSLVSAPKVARD-ENNLSKGYGFVSFATFESSDDAIANMNGQYLMNKEISVQYAYKKD 182
Query: 194 TKG 196
K
Sbjct: 183 GKA 185
>gi|358392239|gb|EHK41643.1| hypothetical protein TRIATDRAFT_84569 [Trichoderma atroviride IMI
206040]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 111/195 (56%), Positives = 155/195 (79%), Gaps = 2/195 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKEATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK +S +VGA LFIGNLDP VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGIKLYGKSLRVNKASADKQRSAEVGAELFIGNLDPMVDEKVLYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ R+ D+G S+GFGF+SY FE+SDAAI ++GQY+ +++++V YA+KKD KG+R
Sbjct: 128 LSIPKVARE-DSGASKGFGFVSYGDFESSDAAIANLHGQYILSKEVSVQYAFKKDGKGDR 186
Query: 199 HGTPAERILAANNPS 213
HG AER LAA S
Sbjct: 187 HGDQAERSLAAQAKS 201
>gi|452841107|gb|EME43044.1| hypothetical protein DOTSEDRAFT_25030 [Dothistroma septosporum
NZE10]
Length = 388
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/197 (60%), Positives = 151/197 (76%), Gaps = 10/197 (5%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E+++D+T YVGNLD + T+ L+WEL +QAGPV+NV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKDSTLYVGNLDERCTDALVWELMLQAGPVINVHLPKDRVTQSHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK---------SLDVGANLFIGNLDPDV 123
F SE+DADYA K++N I+L+GKPIRVNKAS DK+ VGA LFIGNLD
Sbjct: 61 FGSEDDADYACKIMNQIRLWGKPIRVNKASADKRNGENGGLGGGAGVGAELFIGNLDSLA 120
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
DEK+LY+TFS FG +V PK+ RD ++ S+G+GF+SY +FE+SD AIE M+GQYL N++
Sbjct: 121 DEKVLYETFSRFGPLVAAPKVARD-ESNLSKGYGFVSYATFESSDQAIEHMHGQYLMNKE 179
Query: 184 ITVSYAYKKDTKGERHG 200
ITV YAYKKD KGERHG
Sbjct: 180 ITVQYAYKKDGKGERHG 196
>gi|328869602|gb|EGG17979.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 670
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 153/194 (78%), Gaps = 3/194 (1%)
Query: 18 SAERNQDA-TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
+ +R DA T V ++DPQVTE LLWEL +Q PVV V++PKD++T H G +VEF+SE
Sbjct: 391 TQDRGSDAATIQVRDIDPQVTEALLWELMIQVAPVVKVFMPKDKLTQQHSGRAYVEFQSE 450
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
DADYA+++LN IKL+G+PI++ K +K +DVGANLFIGNLD +VDEK+L+DTF F
Sbjct: 451 NDADYAMRILNYIKLFGRPIKLKKVRINNKDKVDVGANLFIGNLDAEVDEKILHDTFIQF 510
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G I+ PKIMRD TG S+GFGF+SYD+F +SDA+IEAMNG++LCN+ I+V+YA KKD+
Sbjct: 511 GAIIQPPKIMRDTSTGVSKGFGFVSYDNFASSDASIEAMNGEFLCNKPISVTYARKKDST 570
Query: 196 GERHGTPAERILAA 209
E+HG+ AER++AA
Sbjct: 571 -EKHGSQAERMIAA 583
>gi|380481860|emb|CCF41594.1| splicing factor 3B subunit 4 [Colletotrichum higginsianum]
Length = 257
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 153/191 (80%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+++DAT Y+GN+D + + +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKDATIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK K +VGA LF+GNLDP VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGIKLYGKSLRVNKASADKQKQAEVGAELFVGNLDPMVDEKILYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PK+ R+ D+GNS+GFGFISY FE+SDAAI ++GQY+ +++++V YA+KKD KGER
Sbjct: 128 VNLPKVARE-DSGNSKGFGFISYADFESSDAAISNLHGQYILSKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 187 HGDAAERELAA 197
>gi|240277045|gb|EER40555.1| splicing factor 3b subunit 4 [Ajellomyces capsulatus H143]
Length = 247
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 147/182 (80%), Gaps = 2/182 (1%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD ++T+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K ++VGA LF+GNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKMVEVGAELFVGNLDPMVTEQVLYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNGQYL N++++V YAYK
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGQYLMNKEVSVQYAYK 179
Query: 192 KD 193
KD
Sbjct: 180 KD 181
>gi|46125929|ref|XP_387518.1| hypothetical protein FG07342.1 [Gibberella zeae PH-1]
Length = 357
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 154/192 (80%), Gaps = 2/192 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKEATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK ++ +VGA LFIGNLD VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGIKLYGKSLRVNKASADKQRAAEVGAELFIGNLDSMVDEKILYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ R+ ++G S+GFGF+S+ FE+SDAAI+ ++GQY+ +++++V YA+KKD KGER
Sbjct: 128 LSLPKVARE-ESGASKGFGFVSFADFESSDAAIDTLHGQYILSKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILAAN 210
HG AER LAA
Sbjct: 187 HGDQAERSLAAE 198
>gi|213402019|ref|XP_002171782.1| spliceosome-associated protein [Schizosaccharomyces japonicus
yFS275]
gi|211999829|gb|EEB05489.1| spliceosome-associated protein [Schizosaccharomyces japonicus
yFS275]
Length = 303
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 149/182 (81%), Gaps = 2/182 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+NQ+AT Y+GNLD +VT+ +L+EL +QAGPVV++++P+DR+ H G+GF E+ +E DA
Sbjct: 5 EKNQEATIYIGNLDDKVTDSILFELCLQAGPVVHIHIPRDRIRATHNGFGFCEYATEADA 64
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-GANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA +VLN +KL+GK IRVNK+SQDK + V GAN+F+GNLD VDEK+L+DTFSAFG +
Sbjct: 65 EYACQVLNQVKLFGKAIRVNKSSQDKNTQSVIGANVFVGNLDTLVDEKVLFDTFSAFGQM 124
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V P+++RD D+G S+G+GF+ +DSFEA DAAIEAMN + N+ ITVSYAYK++ KG++
Sbjct: 125 VQPPQVVRD-DSGKSKGYGFVFFDSFEAGDAAIEAMNNHFFMNKTITVSYAYKREGKGDK 183
Query: 199 HG 200
HG
Sbjct: 184 HG 185
>gi|342879058|gb|EGU80333.1| hypothetical protein FOXB_09130 [Fusarium oxysporum Fo5176]
Length = 375
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 154/191 (80%), Gaps = 2/191 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 26 EQDKEATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDA 85
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK ++ +VGA LFIGNLDP VDEK+LYDTFS FG +
Sbjct: 86 EYAANVMNGIKLYGKSLRVNKASADKQRAAEVGAELFIGNLDPMVDEKILYDTFSRFGPL 145
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ R+ ++G S+GFGF+S+ FE+SDAAI ++GQY+ +++++V YA+KKD KGER
Sbjct: 146 LSLPKVARE-ESGASKGFGFVSFADFESSDAAIANLHGQYILSKEVSVQYAFKKDGKGER 204
Query: 199 HGTPAERILAA 209
HG AER LAA
Sbjct: 205 HGDEAERELAA 215
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 97 RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF 156
R +KA+ + D A ++IGN+D ++Y+ G I N + RD T +GF
Sbjct: 16 RDSKANTLLREQDKEATVYIGNIDERATSAMVYEIMLQMGPI-HNIHMPRDRVTQTHQGF 74
Query: 157 GFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQK 216
GF+ + + ++ A MNG L + + V+ A + G AE + +P +
Sbjct: 75 GFVEFRTPTDAEYAANVMNGIKLYGKSLRVNKASADKQRAAEVG--AELFIGNLDPMVDE 132
Query: 217 SRPHTLFASGPPSL 230
+ F+ P L
Sbjct: 133 KILYDTFSRFGPLL 146
>gi|408396492|gb|EKJ75649.1| hypothetical protein FPSE_04150 [Fusarium pseudograminearum CS3096]
Length = 357
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 154/192 (80%), Gaps = 2/192 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKEATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKLYGK +RVNKAS DK ++ +VGA LFIGNLD VDEK+LYDTFS FG +
Sbjct: 68 EYAANVMNGIKLYGKSLRVNKASADKQRAAEVGAELFIGNLDSMVDEKILYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ R+ ++G S+GFGF+S+ FE+SDAAI+ ++GQY+ +++++V YA+KKD KGER
Sbjct: 128 LSLPKVARE-ESGASKGFGFVSFADFESSDAAIDTLHGQYILSKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILAAN 210
HG AER LAA
Sbjct: 187 HGDQAERSLAAE 198
>gi|440632279|gb|ELR02198.1| hypothetical protein GMDG_00991 [Geomyces destructans 20631-21]
Length = 352
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 165/287 (57%), Gaps = 72/287 (25%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G E++++AT YVGN+D +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVEF
Sbjct: 3 GARHWEQDKEATVYVGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFI 62
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFS 133
SEEDA+YA +V+N ++LYGKPIRVNKAS DK+ LDVGANLF+GNL P +DE LYDTFS
Sbjct: 63 SEEDAEYAARVMNQVRLYGKPIRVNKASADKQKPLDVGANLFLGNLSPHLDEHSLYDTFS 122
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG ++ PKI RDP T S+G+ F+SY SF+A+D A+ M+GQ L +R I+V YAYKKD
Sbjct: 123 RFGALLAPPKIARDPTTALSKGYAFLSYASFDAADDAVANMHGQTLLDRAISVQYAYKKD 182
Query: 194 TKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGA 253
KGERHG PAER+L A
Sbjct: 183 GKGERHGDPAERML---------------------------------------------A 197
Query: 254 ASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVM 300
A V P PP QA IG M
Sbjct: 198 AQAKAHGVLPEAPPAQAM-------------------IG-------M 218
>gi|400598668|gb|EJP66377.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 399
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 151/190 (79%), Gaps = 2/190 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+++DAT Y+GN+D + T +++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKDATIYMGNIDERATPAMMYEIMLQMGPIHNIHMPRDRVTQSHQGFGFVEFRTPADA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N +KL+GK +RVNKAS D+ ++ D+GA LF+GNLDP DEKLLYDTFS FG +
Sbjct: 68 EYAASVVNGVKLFGKSLRVNKASADRQRATDIGAELFVGNLDPSADEKLLYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ RD D G S+GFGF+S+ FE++DAA+E ++GQYL + Q+TV YA+KKD KG+R
Sbjct: 128 LSLPKVARD-DAGVSKGFGFVSFGDFESADAAVEHLSGQYLLSNQVTVQYAFKKDGKGDR 186
Query: 199 HGTPAERILA 208
HG AER LA
Sbjct: 187 HGDQAERELA 196
>gi|56755563|gb|AAW25960.1| SJCHGC01449 protein [Schistosoma japonicum]
Length = 152
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 106/142 (74%), Positives = 129/142 (90%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQDAT YVG LD +V E +LWELF+QAGPVVNV++PKDR+ HQGYGFVEF +EEDA
Sbjct: 8 ERNQDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA++++NMIKLYGKPIRVNKAS ++K+LD+GAN+FIGNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68 DYAMRIMNMIKLYGKPIRVNKASANQKNLDIGANIFIGNLDPEVDEKLLYDTFSAFGVIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISY 161
PKIMRDP+TGNS+G+ FI++
Sbjct: 128 QTPKIMRDPETGNSKGYAFINF 149
>gi|451854358|gb|EMD67651.1| hypothetical protein COCSADRAFT_168831 [Cochliobolus sativus
ND90Pr]
Length = 331
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT YVGNL +VT +L EL + G V NV +P DRV HQ +GFVEF +E +A
Sbjct: 10 EQNKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQSFGFVEFHTEAEA 69
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA K+LN + LYG IRVNKAS DK K++++GA LF+GNLDP VDEK LYDTFS FG +
Sbjct: 70 DYASKILNNVALYGSRIRVNKASADKQKNVEIGAELFVGNLDPGVDEKTLYDTFSRFGPL 129
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PK+ RD T S+G+GFISY FE+SDAAI +M+ QY+ ++QITV YAYKKD KGER
Sbjct: 130 VNAPKVARDEVTTASKGYGFISYGDFESSDAAIASMHNQYIMSKQITVQYAYKKDGKGER 189
Query: 199 HGTPAERILA 208
HG AER+LA
Sbjct: 190 HGDEAERMLA 199
>gi|451999433|gb|EMD91895.1| hypothetical protein COCHEDRAFT_1154917 [Cochliobolus
heterostrophus C5]
Length = 331
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT YVGNL +VT +L EL + G V NV +P DRV HQ +GFVEF +E +A
Sbjct: 10 EQNKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQSFGFVEFHTEAEA 69
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA K+LN + LYG IRVNKAS DK K++++GA LF+GNLDP VDEK LYDTFS FG +
Sbjct: 70 DYASKILNNVALYGSRIRVNKASADKQKNVEIGAELFVGNLDPGVDEKTLYDTFSRFGPL 129
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PK+ RD T S+G+GFISY FE+SDAAI +M+ QY+ ++QITV YAYKKD KGER
Sbjct: 130 VNAPKVARDEVTTASKGYGFISYGDFESSDAAIASMHNQYIMSKQITVQYAYKKDGKGER 189
Query: 199 HGTPAERILA 208
HG AER+LA
Sbjct: 190 HGDEAERMLA 199
>gi|322696259|gb|EFY88054.1| splicing factor 3b subunit 4 [Metarhizium acridum CQMa 102]
Length = 578
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 151/190 (79%), Gaps = 2/190 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T ++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 28 EQDKEATIYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDA 87
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKL+GK +RVNKAS DK K D+GA LFIGNLDP VDEKLLYDTFS FG +
Sbjct: 88 EYAANVMNGIKLFGKSLRVNKASADKQKGADIGAELFIGNLDPMVDEKLLYDTFSRFGPL 147
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ RD D+G S+GFGF+S+ FE+SDAA+ ++GQY+ +++++V YA+KKD KGER
Sbjct: 148 LSLPKVARD-DSGMSKGFGFVSFGDFESSDAAVANLDGQYMLSKEVSVQYAFKKDGKGER 206
Query: 199 HGTPAERILA 208
HG AER LA
Sbjct: 207 HGDEAERELA 216
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
Query: 109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
D+GA LFIGNLDP VDEKLLYDTFS FG +++ PK+ RD D+G S+GFGF+S+ FE+SD
Sbjct: 280 DIGAVLFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARD-DSGMSKGFGFVSFGDFESSD 338
Query: 169 AAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILA 208
AA+ ++GQY+ +++++V YA+KKD KGERHG AER LA
Sbjct: 339 AAVANLDGQYMLSKEVSVQYAFKKDGKGERHGDEAERELA 378
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
A ++GNLDP V E+LL++ F + GP++++ V +D + + +G+GFV F E +D A+
Sbjct: 283 AVLFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARDD-SGMSKGFGFVSFGDFESSDAAV 341
Query: 84 KVLNMIKLYGKPIRVNKA 101
L+ + K + V A
Sbjct: 342 ANLDGQYMLSKEVSVQYA 359
>gi|189189942|ref|XP_001931310.1| spliceosome-associated protein 49 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972916|gb|EDU40415.1| spliceosome-associated protein 49 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 329
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 142/190 (74%), Gaps = 1/190 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT YVGNL +VT +L EL + G V NV +P DRV HQG+GFVEF +EE+A
Sbjct: 10 EQNKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEA 69
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA K++N + LYG IRVNKAS DK K++++GA LFIGNLD VDE+ LYDTF FG +
Sbjct: 70 DYAPKIMNNVALYGSRIRVNKASADKQKNVEIGAELFIGNLDHGVDERTLYDTFGQFGPL 129
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PKI RD T S+G+GFISY FE+SDAAI M+ QY+ ++QITV YAYKKD KGER
Sbjct: 130 VNAPKIARDEVTSESKGYGFISYGDFESSDAAIANMHNQYIMSKQITVQYAYKKDGKGER 189
Query: 199 HGTPAERILA 208
HG AER+LA
Sbjct: 190 HGDEAERLLA 199
>gi|330934048|ref|XP_003304396.1| hypothetical protein PTT_16975 [Pyrenophora teres f. teres 0-1]
gi|311319032|gb|EFQ87532.1| hypothetical protein PTT_16975 [Pyrenophora teres f. teres 0-1]
Length = 328
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 142/190 (74%), Gaps = 1/190 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT YVGNL +VT +L EL + G V NV +P DRV HQG+GFVEF +EE+A
Sbjct: 10 EQNKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEA 69
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA K++N + LYG IRVNKAS DK K++++GA LFIGNLD VDE+ LYDTF FG +
Sbjct: 70 DYAPKIMNNVALYGSRIRVNKASADKQKNVEIGAELFIGNLDHGVDERTLYDTFGQFGPL 129
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PKI RD T S+G+GFISY FE+SDAAI M+ QY+ ++QITV YAYKKD KGER
Sbjct: 130 VNAPKIARDEVTSESKGYGFISYGDFESSDAAIANMHNQYIMSKQITVQYAYKKDGKGER 189
Query: 199 HGTPAERILA 208
HG AER+LA
Sbjct: 190 HGDEAERLLA 199
>gi|322705004|gb|EFY96593.1| splicing factor 3b subunit 4 [Metarhizium anisopliae ARSEF 23]
Length = 383
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 151/190 (79%), Gaps = 2/190 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T ++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKEATIYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA V+N IKL+GK +RVNKAS DK K D+GA LFIGNLDP VDEKLLYDTFS FG +
Sbjct: 68 EYAANVMNGIKLFGKSLRVNKASADKQKGADIGAELFIGNLDPMVDEKLLYDTFSRFGPL 127
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ PK+ RD D+G S+GFGF+S+ FE+SDAA+ ++GQY+ +++++V YA+KKD KGER
Sbjct: 128 LSLPKVARD-DSGMSKGFGFVSFGDFESSDAAVANLDGQYMLSKEVSVQYAFKKDGKGER 186
Query: 199 HGTPAERILA 208
HG AER LA
Sbjct: 187 HGDEAERELA 196
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 151/205 (73%), Gaps = 2/205 (0%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
RN++AT YVG LD +V EELLWELF+Q GPVV+V +PKD+V N H + F+E++SE DA+
Sbjct: 8 RNEEATLYVGGLDERVDEELLWELFLQFGPVVSVSMPKDKVLNKHMEFAFIEYQSEIDAE 67
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
YA V + I LYG+ IRVNK+++D+ +LDVGA+LFI NL PDV E ++ TFS FG +
Sbjct: 68 YASHVCDNITLYGRKIRVNKSNKDRPTLDVGADLFISNLAPDVTEDMIKTTFSQFGQLAC 127
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
P I RDP+T S+G F++Y SFE+SD IE+MNGQY R I V YAYKK T+GERHG
Sbjct: 128 EPIIARDPETNISKGHAFVNYTSFESSDFVIESMNGQYFHGRPIVVQYAYKKGTRGERHG 187
Query: 201 TPAERILAANNPSSQKSRPHTLFAS 225
+ AER+LA +NP ++R + + +S
Sbjct: 188 SAAERLLAKSNP--DRARVNAMMSS 210
>gi|326472489|gb|EGD96498.1| splicing factor 3b subunit 4 [Trichophyton tonsurans CBS 112818]
Length = 362
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 153/211 (72%), Gaps = 25/211 (11%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT++L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MSGARHWEQDKEATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LF+GNLDP V E++ D
Sbjct: 61 FNSEEDAEYASRIMNQVRLYGKPIRVNKASADKQKAVEVGAELFVGNLDPMVTEQVARD- 119
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
D+ S+G+GFIS+ +FEASD AI MNGQYL N++I+V YAYK
Sbjct: 120 -----------------DSNLSKGYGFISFSNFEASDDAIANMNGQYLMNKEISVQYAYK 162
Query: 192 KDTKGERHGTPAERILAANNPSSQKSRPHTL 222
KD KGERHG AER+LAA ++R H +
Sbjct: 163 KDGKGERHGDQAERMLAA------QARKHNV 187
>gi|169612257|ref|XP_001799546.1| hypothetical protein SNOG_09247 [Phaeosphaeria nodorum SN15]
gi|160702468|gb|EAT83439.2| hypothetical protein SNOG_09247 [Phaeosphaeria nodorum SN15]
Length = 306
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/190 (60%), Positives = 146/190 (76%), Gaps = 2/190 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT YVGNL +V+ +L EL + AG V NV +P DRV HQG+GFVEF +EE+A
Sbjct: 7 EQNKEATVYVGNLHERVSPRILHELMLNAGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA KV+N + L+G IRVNKAS DK K++++GA LFIGNLD VDEK LYDTF FG +
Sbjct: 67 DYAPKVMNNVMLHGNRIRVNKASADKQKNVEIGAELFIGNLDQMVDEKTLYDTFGQFGPL 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ PK+ RD ++ S+G+GFISY FE+SDAAI +M+GQY+ N+QI+V YAYKKD KGER
Sbjct: 127 INAPKVARD-ESNMSKGYGFISYGDFESSDAAIASMHGQYMMNKQISVQYAYKKDGKGER 185
Query: 199 HGTPAERILA 208
HG AER+LA
Sbjct: 186 HGDEAERMLA 195
>gi|290999559|ref|XP_002682347.1| predicted protein [Naegleria gruberi]
gi|284095974|gb|EFC49603.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 153/198 (77%), Gaps = 6/198 (3%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT +VGNLD QV EELLWELFVQ GPVV+ +P+DR+TN H GY FVEF+ E DA
Sbjct: 1 ERNQEATIFVGNLDQQVDEELLWELFVQMGPVVDAKIPRDRITNTHSGYAFVEFKHEHDA 60
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK--KSLDVGANLFIGNLDP--DVDEKLLYDTFSAF 135
+YAI+V+N IKL+G+P+++N+ QDK K+LDVGANL++GNLDP DE +L + F F
Sbjct: 61 NYAIQVMNQIKLFGRPMKLNRYDQDKSAKNLDVGANLWVGNLDPVGVSDEGILRELFGQF 120
Query: 136 GVIVTN-PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDT 194
GV++ N P+I RDP+T S+GF F+SYD+FE++DAA +NGQY+ + I V YA+K ++
Sbjct: 121 GVMIQNTPRIQRDPETMESKGFAFVSYDNFESADAAKMHLNGQYISGKPIIVEYAFKPNS 180
Query: 195 KGERHGTPAERILAANNP 212
+ ER+G+ AER LAA P
Sbjct: 181 R-ERYGSEAERELAAKRP 197
>gi|396494938|ref|XP_003844425.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
gi|312221005|emb|CBY00946.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
Length = 344
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 144/190 (75%), Gaps = 2/190 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N++AT Y GNL +VT +L EL + AG V NV +P DRV HQG+GFVE+ +EE+A
Sbjct: 10 EQNKEATVYCGNLHERVTPRILHELMLNAGRVRNVNMPVDRVNGQHQGFGFVEYHTEEEA 69
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
DYA K++N I LYG IRVNKAS DK +++++GA LFIGNLD VDEK LYDTF FG +
Sbjct: 70 DYAPKIMNNIALYGTRIRVNKASADKQRNVEIGAELFIGNLDAMVDEKTLYDTFGQFGPL 129
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V PKI RD + S+G+GFISY FE+SDAAI +M+GQY+ N+QI+V YAYKKD KGER
Sbjct: 130 VNAPKIARD-EANLSKGYGFISYGDFESSDAAIASMHGQYIMNKQISVQYAYKKDGKGER 188
Query: 199 HGTPAERILA 208
HG AER+LA
Sbjct: 189 HGDEAERMLA 198
>gi|66827787|ref|XP_647248.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997530|sp|Q55GD6.1|SF3B4_DICDI RecName: Full=Splicing factor 3B subunit 4
gi|60475375|gb|EAL73310.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 359
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 151/191 (79%), Gaps = 4/191 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN +A + +LDP VTE LL ELF+QA PVV V++PKD++T H G +VEF+S DA
Sbjct: 8 ERNHEACLLIRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHSGRAYVEFQSSSDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA+KV+ ++L+ K I++ K ++DK +D+GANLFIGNLD DVDE++L+DTFS FG I+
Sbjct: 68 EYALKVMKFVRLFNKEIKIKKENKDK--VDIGANLFIGNLDADVDERILHDTFSRFGTII 125
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
PK+MRD + G S+GF FI++DSFEASDAAIEAMN Q+LCN+ I+V+YA KKD+ ERH
Sbjct: 126 FTPKVMRD-ENGVSKGFAFINFDSFEASDAAIEAMNSQFLCNKPISVTYARKKDS-NERH 183
Query: 200 GTPAERILAAN 210
G+ AERI+AA+
Sbjct: 184 GSSAERIIAAS 194
>gi|326481712|gb|EGE05722.1| splicing factor 3b subunit 4 [Trichophyton equinum CBS 127.97]
Length = 347
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 143/179 (79%), Gaps = 8/179 (4%)
Query: 45 FVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD 104
+QAG +VNV++PKDRVT HQGYGFVEF SEEDA+YA +++N ++LYGKPIRVNKAS D
Sbjct: 1 MLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASRIMNQVRLYGKPIRVNKASAD 60
Query: 105 K-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDS 163
K K+++VGA LF+GNLDP V E++LYDTFS FG +++ PK+ RD D+ S+G+GFIS+ +
Sbjct: 61 KQKAVEVGAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSN 119
Query: 164 FEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTL 222
FEASD AI MNGQYL N++I+V YAYKKD KGERHG AER+LAA ++R H +
Sbjct: 120 FEASDDAIANMNGQYLMNKEISVQYAYKKDGKGERHGDQAERMLAA------QARKHNV 172
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
A +VGNLDP VTE++L++ F + G ++++ V +D +NL +GYGF+ F + E +D AI
Sbjct: 69 AELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARDD-SNLSKGYGFISFSNFEASDDAI 127
Query: 84 KVLNMIKLYGKPIRVNKA 101
+N L K I V A
Sbjct: 128 ANMNGQYLMNKEISVQYA 145
>gi|340914842|gb|EGS18183.1| hypothetical protein CTHT_0061980 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 392
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 140/177 (79%), Gaps = 2/177 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+N+DAT YVGN+D + T ELL EL Q GPV V++P+DRV+ HQGYGFVEF + A
Sbjct: 7 EQNKDATVYVGNIDERFTHELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASA 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
+YA KVLN I+++GKPIRVNKAS DK K++D+GA LFI NLDP VDEK+LYDTFS FG I
Sbjct: 67 EYAAKVLNGIRIWGKPIRVNKASADKQKTVDIGAELFINNLDPLVDEKILYDTFSQFGTI 126
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ P ++RD + S+G+GF+S+DSFEASDAAI MNGQYL ++QITV YAYKKD K
Sbjct: 127 LRQPNVVRD-ENNISKGYGFVSFDSFEASDAAIANMNGQYLLSKQITVEYAYKKDGK 182
>gi|221060330|ref|XP_002260810.1| spliceosome-associated protein [Plasmodium knowlesi strain H]
gi|193810884|emb|CAQ42782.1| spliceosome-associated protein, putative [Plasmodium knowlesi
strain H]
Length = 514
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 181/345 (52%), Gaps = 74/345 (21%)
Query: 31 NLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH------------------------- 65
NLD QV EE+L ELF+Q G V NV++P+D++ H
Sbjct: 42 NLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHAGRRCTLVGEARIVLYTSPVCTSLT 101
Query: 66 --------------QGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG 111
GYGFVE+ E + +YA KVLNM KL+GKP+R NKASQDKKS DVG
Sbjct: 102 YVSSHTHTHTHIYTSGYGFVEYEYEYECEYAGKVLNMTKLFGKPLRCNKASQDKKSFDVG 161
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
ANLFIGNLD +VDEK+L+D FS+FG +VT +I+R+ D SRG GFISYD+FE+SD AI
Sbjct: 162 ANLFIGNLDAEVDEKMLFDIFSSFGQVVT-VRIIRNEDD-TSRGHGFISYDNFESSDMAI 219
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
E MN Q++CN+++ +SYA+KKD+KGERHGT AER +AAN S S P +L
Sbjct: 220 ENMNNQFICNKKVHISYAFKKDSKGERHGTAAERFIAANKALSLFSGNENSNNLMPHNLS 279
Query: 232 NAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHI 291
N T R NG+ +G + PP A PP
Sbjct: 280 NGENTTNT------RRGKNNGSLNGENNQFLRPPLTSSNAINPP---------------- 317
Query: 292 GQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGA 336
+PP M P NMPPP P QPM + +
Sbjct: 318 ----SSNSLPPVMNSYFPGNMPPPMGSSF-------PNQPMNINS 351
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 1 MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60
MT + N Q + A ++GNLD +V E++L+++F G VV V + ++
Sbjct: 138 MTKLFGKPLRCNKASQDKKSFDVGANLFIGNLDAEVDEKMLFDIFSSFGQVVTVRIIRNE 197
Query: 61 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKK 106
+ +G+GF+ + + E +D AI+ +N + K + ++ A +D K
Sbjct: 198 -DDTSRGHGFISYDNFESSDMAIENMNNQFICNKKVHISYAFKKDSK 243
>gi|50553138|ref|XP_503979.1| YALI0E15356p [Yarrowia lipolytica]
gi|49649848|emb|CAG79572.1| YALI0E15356p [Yarrowia lipolytica CLIB122]
Length = 225
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 151/205 (73%), Gaps = 2/205 (0%)
Query: 12 NLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
N + Q A++N +AT Y+GNLD VTE +L+EL +QAGP+V++ +PKDRV+ HQGYGFV
Sbjct: 2 NRVNQQEADQNPEATLYIGNLDENVTEAILYELMLQAGPIVHINLPKDRVSQTHQGYGFV 61
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYD 130
E+++E DA+YA ++N I L+GK IRV+K++ DK++ ++GA LF+G+LDP VDE L
Sbjct: 62 EYKTEADANYAASIMNQIWLFGKSIRVSKSASDKQNGFEIGATLFVGSLDPLVDESTLQQ 121
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
TFS FG P+I RD D G+S+G+GF+S+ FE SD A+E+M+ QYL N+QITV+YA+
Sbjct: 122 TFSVFGPFAKPPRISRDTD-GSSKGYGFVSFTDFEHSDRALESMDKQYLMNQQITVTYAF 180
Query: 191 KKDTKGERHGTPAERILAANNPSSQ 215
K D KG RHG ER+LA +Q
Sbjct: 181 KHDGKGGRHGDETERLLALQAKKNQ 205
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 98 VNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFG 157
+N+ +Q + + A L+IGNLD +V E +LY+ G IV + + +D + +G+G
Sbjct: 1 MNRVNQQEADQNPEATLYIGNLDENVTEAILYELMLQAGPIV-HINLPKDRVSQTHQGYG 59
Query: 158 FISYDSFEASDAAIEAMNGQYLCNRQITVS 187
F+ Y + ++ A MN +L + I VS
Sbjct: 60 FVEYKTEADANYAASIMNQIWLFGKSIRVS 89
>gi|225683056|gb|EEH21340.1| spliceosome-associated protein [Paracoccidioides brasiliensis Pb03]
Length = 200
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 148/196 (75%), Gaps = 3/196 (1%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVE
Sbjct: 1 MAGVRHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVE 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDT 131
F SEEDA+YA +++N ++LYGKPIRVNKAS DK K+++VGA LFIGNLDP V E++LYDT
Sbjct: 61 FISEEDAEYAARIMNQVRLYGKPIRVNKASADKQKTVEVGAELFIGNLDPMVTEQILYDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG +++ PKI RD D S+G+GF+S+ +FEASD AI MNG+YL N+
Sbjct: 121 FSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDAIANMNGRYLMNKGGGGGNTPT 179
Query: 192 KDTKGE-RHGTPAERI 206
T GE RHG AER+
Sbjct: 180 IKTAGEKRHGDGAERM 195
>gi|346322787|gb|EGX92385.1| splicing factor 3b subunit 4 [Cordyceps militaris CM01]
Length = 404
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 148/200 (74%), Gaps = 12/200 (6%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E++++AT Y+GN+D + T ++E+ +Q GP+ N+++P+DRVT HQG+GFVEFR+ DA
Sbjct: 8 EQDKEATIYMGNIDERATPATMYEIMLQMGPIHNIHMPRDRVTQSHQGFGFVEFRTPSDA 67
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK-----------SLDVGANLFIGNLDPDVDEKLL 128
+YA V+N +KLYGK +RVNKAS D++ + D+GA LF+GNLDP DEK+L
Sbjct: 68 EYAAAVMNGVKLYGKSLRVNKASADRRGGGAGGPNGGGTTDIGAELFVGNLDPSCDEKVL 127
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
YDTFS FG +++ PKI RD D S+GFGFIS+ F+++D AIE ++G YL ++Q+TV +
Sbjct: 128 YDTFSRFGPLLSLPKIARD-DNAVSKGFGFISFADFDSADEAIETLSGTYLLSQQVTVQF 186
Query: 189 AYKKDTKGERHGTPAERILA 208
A+K+D KGERHG +ER LA
Sbjct: 187 AFKRDGKGERHGDKSERELA 206
>gi|302762268|ref|XP_002964556.1| hypothetical protein SELMODRAFT_3379 [Selaginella moellendorffii]
gi|302825197|ref|XP_002994230.1| hypothetical protein SELMODRAFT_3378 [Selaginella moellendorffii]
gi|300137901|gb|EFJ04697.1| hypothetical protein SELMODRAFT_3378 [Selaginella moellendorffii]
gi|300168285|gb|EFJ34889.1| hypothetical protein SELMODRAFT_3379 [Selaginella moellendorffii]
Length = 204
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 145/204 (71%), Gaps = 10/204 (4%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E NQDATAYVGNLDPQVTE++LWELF Q V +VY+P+D++T H GYGFVE +E
Sbjct: 1 EHNQDATAYVGNLDPQVTEDILWELFTQVARVQSVYIPRDKITTAHSGYGFVELANETAV 60
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
DYA+K+LN +LYG+ IR++KAS K +VGANLF+GNL VD LL FS FG +V
Sbjct: 61 DYAVKILNNCRLYGRCIRMSKASH--KDENVGANLFVGNLSRTVDNYLLGSIFSGFGRVV 118
Query: 140 TNPKIMRDPDTGNSR-GFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ + D T R G+GF+ YD FEASD AIE+M+ Q++ N+Q++VSYA KKD+ GE
Sbjct: 119 YSSVVHSDDQT---RPGYGFVHYDCFEASDLAIESMDKQFIENQQVSVSYARKKDS-GEL 174
Query: 199 HGTPAERILAANNPSSQKSRPHTL 222
HG+PAER +AA NP +PH +
Sbjct: 175 HGSPAEREIAAKNPD---RKPHII 195
>gi|66475928|ref|XP_627780.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|46229319|gb|EAK90168.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 216
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 145/200 (72%), Gaps = 4/200 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT Y GNL+ +V EE+L ELF Q GPV +V++P+D+VT H G+GF+EF D
Sbjct: 18 ERNQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIEFEFVSDV 77
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA KV+N IKL+ K IR KAS D+K LD+GANL++GNL P++DEK L+ FS FG I+
Sbjct: 78 EYAQKVMNSIKLFTKQIRCCKASNDRKPLDIGANLYVGNLSPEIDEKFLFYLFSNFGKIL 137
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ + D + + + FI++ SF+ SD+AI+A+NGQ+ CN+QI+VSYA+K+++K E+H
Sbjct: 138 SLKIVGNDQSSQSPKNSAFINFSSFQESDSAIQALNGQFFCNQQISVSYAFKQNSKNEKH 197
Query: 200 GTPAERILAANNPSSQKSRP 219
G AER+L S K++P
Sbjct: 198 GNYAERLL----ESKSKTKP 213
>gi|67623141|ref|XP_667853.1| splicing factor [Cryptosporidium hominis TU502]
gi|32399025|emb|CAD98265.1| splicing factor, probable [Cryptosporidium parvum]
gi|54659016|gb|EAL37616.1| splicing factor [Cryptosporidium hominis]
Length = 213
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 145/200 (72%), Gaps = 4/200 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERNQ+AT Y GNL+ +V EE+L ELF Q GPV +V++P+D+VT H G+GF+EF D
Sbjct: 15 ERNQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIEFEFVSDV 74
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA KV+N IKL+ K IR KAS D+K LD+GANL++GNL P++DEK L+ FS FG I+
Sbjct: 75 EYAQKVMNSIKLFTKQIRCCKASNDRKPLDIGANLYVGNLSPEIDEKFLFYLFSNFGKIL 134
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ + D + + + FI++ SF+ SD+AI+A+NGQ+ CN+QI+VSYA+K+++K E+H
Sbjct: 135 SLKIVGNDQSSQSPKNSAFINFSSFQESDSAIQALNGQFFCNQQISVSYAFKQNSKNEKH 194
Query: 200 GTPAERILAANNPSSQKSRP 219
G AER+L S K++P
Sbjct: 195 GNYAERLL----ESKSKTKP 210
>gi|294659049|ref|XP_461388.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
gi|202953578|emb|CAG89795.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
Length = 252
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 148/218 (67%), Gaps = 19/218 (8%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++RN A+ Y GNLDPQVTE LL+ELF+Q P+ ++ +PKDRV HQGYGF+EFR+ +D
Sbjct: 11 SDRNVKASLYFGNLDPQVTEPLLYELFIQFAPIRSLNLPKDRVLKTHQGYGFIEFRTIKD 70
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA--------------SQDKKSLDVGANLFIGNLDPDVD 124
A+Y + +L I+LYGK +++ KA + ++D+GA +FI NL+P +D
Sbjct: 71 AEYVLNILRGIRLYGKMLKLKKAEPNFKGSSQQSVGVTTTSNAMDIGAKIFINNLNPLID 130
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
E+ L DTFS FG +V +P I+RDP++G S+G+GFIS++ F +SD AIE M+G L N ++
Sbjct: 131 EQSLADTFSKFGTLVRSPSIIRDPESGESKGYGFISFNDFASSDTAIEKMDGAILMNSKV 190
Query: 185 TVSYAYKKD-TKGE----RHGTPAERILAANNPSSQKS 217
+V+YA+K D T G+ +HG ER+LA N S+ S
Sbjct: 191 SVTYAFKDDPTSGQQMKVKHGDKVERLLAENAKSNNVS 228
>gi|448123377|ref|XP_004204677.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|448125660|ref|XP_004205235.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358249868|emb|CCE72934.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358350216|emb|CCE73495.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 144/220 (65%), Gaps = 25/220 (11%)
Query: 16 QHS--AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+HS ++RN +A+ Y N+D QVTE LL+ELF+Q GPV + +PKDR+ HQGYGFVEF
Sbjct: 6 RHSNDSDRNINASLYFSNIDYQVTELLLYELFIQFGPVRTLNLPKDRILKTHQGYGFVEF 65
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS------------------LDVGANLF 115
++ +DA+Y +++L I+L+GK +++ K K+ +DVGA LF
Sbjct: 66 KTAKDAEYVLEILRGIRLFGKVLKLKKVDPHFKTNPSASASNQVAPTPTMSGVDVGAKLF 125
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
I NL P VDEK+L DTFS FG I+ P + RDPD+G S+G+GFI+YD F ASD AIE MN
Sbjct: 126 IKNLHPLVDEKMLRDTFSKFGNIIRPPVVARDPDSGASKGYGFITYDDFAASDLAIEKMN 185
Query: 176 GQYLCNRQITVSYAYKKDTKGE-----RHGTPAERILAAN 210
G L N +I+VSYAYK + G +HG AER+LA N
Sbjct: 186 GVILTNNKISVSYAYKDELVGSSNKRAKHGDKAERLLAEN 225
>gi|150866142|ref|XP_001385635.2| hypothetical protein PICST_84754 [Scheffersomyces stipitis CBS
6054]
gi|149387398|gb|ABN67606.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 246
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 138/204 (67%), Gaps = 15/204 (7%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERN DA+ Y GNLDP+VTE +++ELF+Q P+ + +PKDR+ HQGYGFVEFR+ D
Sbjct: 11 AERNIDASLYFGNLDPEVTELIMYELFIQFAPLRYLNMPKDRILKTHQGYGFVEFRTVRD 70
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-------SQDKK-------SLDVGANLFIGNLDPDVD 124
ADYA+ +L ++LYGK +++ KA S + + +++VGA LF+ NL P VD
Sbjct: 71 ADYALDILRGVRLYGKQLKIKKAEPPKSGTSSESQFVGATGGAINVGAKLFLNNLSPLVD 130
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
E+ L +TFS FG ++ NP + RDP+TG SRG+GF+++D F D I M+G L N +I
Sbjct: 131 EQFLRETFSKFGTLIKNPVVARDPETGESRGYGFLTFDDFTVCDEVIAKMDGALLMNGKI 190
Query: 185 TVSYAYKKDTKGERHGTPAERILA 208
+VSYA+K D K RHG ER+LA
Sbjct: 191 SVSYAFKDDKKA-RHGDKVERLLA 213
>gi|412988957|emb|CCO15548.1| predicted protein [Bathycoccus prasinos]
Length = 247
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 125/166 (75%), Gaps = 10/166 (6%)
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG----ANLFIGNLDPDVDEKLLY 129
+ EED +Y +K+LNMIK++GKPIRVNKASQD AN+F+GNLD ++DEK+LY
Sbjct: 2 KREEDCEYCVKILNMIKVFGKPIRVNKASQDGGKGGGDVGVGANVFVGNLDAEIDEKMLY 61
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
DTFSAFG ++T PK+ RDP++G SRGFGF+ +DSFEASD AIEAM+GQ+L +QITV YA
Sbjct: 62 DTFSAFGSVITAPKVQRDPESGESRGFGFVQFDSFEASDRAIEAMHGQFLAGKQITVVYA 121
Query: 190 YKKDTKGERHGTPAERILA----ANNP--SSQKSRPHTLFASGPPS 229
YKKDT GERHG+ AER+LA NN ++ RPH +F+ G +
Sbjct: 122 YKKDTNGERHGSQAERLLAQAGMQNNGGYGGRQLRPHAMFSDGSAT 167
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
A +VGNLD ++ E++L++ F G V+ V +D + +G+GFV+F S E +D AI
Sbjct: 44 ANVFVGNLDAEIDEKMLYDTFSAFGSVITAPKVQRDPESGESRGFGFVQFDSFEASDRAI 103
Query: 84 KVLNMIKLYGKPIRV 98
+ ++ L GK I V
Sbjct: 104 EAMHGQFLAGKQITV 118
>gi|238883601|gb|EEQ47239.1| hypothetical protein CAWG_05803 [Candida albicans WO-1]
Length = 259
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 27/216 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++RN DA+ Y GN+DPQVTE L++ELF+Q GPV ++ +PKDR+ HQGYGFVEF++ D
Sbjct: 11 SDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEFKNSAD 70
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKS-----------------------LDVGANLF 115
A Y +++L I+LYGK +++ + +S +DVGA LF
Sbjct: 71 AKYTMEILRGIRLYGKALKLKRIDAKSQSSTNNPNNQTIGTFVQSDLINPNYIDVGAKLF 130
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
I NL+P VDE L DTFS FG ++ NP I RD + G+S G+GF++YD FE+SD I+ MN
Sbjct: 131 INNLNPLVDESFLMDTFSKFGTLIRNPIIRRDSE-GHSLGYGFLTYDDFESSDLCIQKMN 189
Query: 176 GQYLCNRQITVSYAYKK---DTKGERHGTPAERILA 208
L N +IT+SYA+K D K RHG ER LA
Sbjct: 190 NTILMNNKITISYAFKDSSVDGKKSRHGDQVERTLA 225
>gi|190344642|gb|EDK36359.2| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 143/219 (65%), Gaps = 22/219 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+RN AT YVGNLDPQV E LL+EL +Q P+ ++ +PKDRV+ HQGYGFVEFR ED
Sbjct: 11 ADRNVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVSGTHQGYGFVEFRGIED 70
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKK-----------------SLDVGANLFIGNLDP 121
A+Y +++L ++LYGK +++ +A + + ++DVGA LF+GNLDP
Sbjct: 71 ANYVLEILRGVRLYGKSLKLRRADPNSRGAAGTTSNFANNNSVTNAVDVGAKLFVGNLDP 130
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+DE+ L++TFS FG +V P ++RD +TG S+ GF+++ F+ +D+ IE MNG L N
Sbjct: 131 LIDEQYLHETFSKFGTMVRPPVVIRDSETGESKRHGFLTFGDFQTTDSVIEKMNGAVLMN 190
Query: 182 RQITVSYAYKKD-----TKGERHGTPAERILAANNPSSQ 215
I++ YA+K+D K RHG ER+LAAN S+
Sbjct: 191 ASISIDYAFKEDPANSNQKRIRHGDKVERMLAANVSSAN 229
>gi|68482438|ref|XP_714851.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|68482559|ref|XP_714789.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|46436383|gb|EAK95746.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|46436448|gb|EAK95810.1| likely U2-associated splicing factor [Candida albicans SC5314]
Length = 259
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 27/216 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++RN DA+ Y GN+DPQVTE L++ELF+Q GPV ++ +PKDR+ HQGYGFVEF++ D
Sbjct: 11 SDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEFKNSAD 70
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKS-----------------------LDVGANLF 115
A Y +++L I+LYGK +++ + +S +DVGA LF
Sbjct: 71 AKYTMEILRGIRLYGKALKLKRIDAKSQSSTNNPNNQTIGTFVQSDLINPNYIDVGAKLF 130
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
I NL+P VDE L DTFS FG ++ NP I RD + G+S G+GF++YD FE+SD I+ MN
Sbjct: 131 INNLNPLVDESFLMDTFSKFGTLIRNPIIRRDSE-GHSLGYGFLTYDDFESSDLCIQKMN 189
Query: 176 GQYLCNRQITVSYAYKK---DTKGERHGTPAERILA 208
L N +IT+SYA+K D K RHG ER LA
Sbjct: 190 NTILMNNKITISYAFKDLSVDGKKSRHGDQVERKLA 225
>gi|146422279|ref|XP_001487080.1| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 142/219 (64%), Gaps = 22/219 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+RN AT YVGNLDPQV E LL+EL +Q P+ ++ +PKDRV HQGYGFVEFR ED
Sbjct: 11 ADRNVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVLGTHQGYGFVEFRGIED 70
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKK-----------------SLDVGANLFIGNLDP 121
A+Y +++L ++LYGK +++ +A + + ++DVGA LF+GNLDP
Sbjct: 71 ANYVLEILRGVRLYGKSLKLRRADPNSRGAAGTTSNFANNNSVTNAVDVGAKLFVGNLDP 130
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+DE+ L++TFS FG +V P ++RD +TG S+ GF+++ F+ +D+ IE MNG L N
Sbjct: 131 LIDEQYLHETFSKFGTMVRPPVVIRDSETGESKRHGFLTFGDFQTTDSVIEKMNGAVLMN 190
Query: 182 RQITVSYAYKKD-----TKGERHGTPAERILAANNPSSQ 215
I++ YA+K+D K RHG ER+LAAN S+
Sbjct: 191 ALISIDYAFKEDPANSNQKRIRHGDKVERMLAANVSSAN 229
>gi|344233005|gb|EGV64878.1| hypothetical protein CANTEDRAFT_104351 [Candida tenuis ATCC 10573]
Length = 241
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 147/201 (73%), Gaps = 10/201 (4%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+RN +A+ Y+GNLDP+VTE +L+ELFVQ PV ++++PKDRV HQG+GFVEF++ +D
Sbjct: 12 DRNVEASLYIGNLDPKVTETILYELFVQFAPVRSLHLPKDRVLRAHQGFGFVEFKNPKDT 71
Query: 80 DYAIKVLNMIKLYGKPIRVNK-------ASQDKKSL---DVGANLFIGNLDPDVDEKLLY 129
+Y + L ++LYGK +R+ + ++Q KS+ DVGA +F+ NL+P +DEK L
Sbjct: 72 EYVVSALKGVRLYGKLLRLRQLEAGKPSSTQPSKSVSTADVGAKIFVNNLNPLIDEKFLA 131
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+TFSAFG ++ +P+I+RDP TG S+G GF+ +D F++SD AIE++NG+ L N ITV+YA
Sbjct: 132 ETFSAFGTVIGSPQIVRDPQTGESKGHGFVDFDDFDSSDKAIESLNGKMLMNCLITVAYA 191
Query: 190 YKKDTKGERHGTPAERILAAN 210
+K + RHG AER+LAAN
Sbjct: 192 FKGTNQKVRHGDKAERVLAAN 212
>gi|260940088|ref|XP_002614344.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
gi|238852238|gb|EEQ41702.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
Length = 222
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 135/196 (68%), Gaps = 7/196 (3%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AE+N A+ YVGNLDPQV+E LL+ELF+QAGPV ++++PKDR++ HQG+GFVEFR+ +D
Sbjct: 10 AEKNPHASVYVGNLDPQVSETLLYELFIQAGPVRSLHLPKDRISREHQGFGFVEFRTAQD 69
Query: 79 ADYAIKVLNMIKLYGKPIRVNK------ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
ADYA+++ ++L+G+ +++ K + L VGA LF+GNL+P VDE+ L +TF
Sbjct: 70 ADYAVELFRGVRLFGRTLKMKKTDPQSTTETETSGLSVGARLFVGNLNPLVDEQYLRETF 129
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ FG +V P + RD + G +G GF+ + FE+SD A+ MNG L N +I V YAYK
Sbjct: 130 NKFGALVGRPVLARD-ENGTPKGHGFVEFSDFESSDDALSKMNGAILMNSRIKVEYAYKD 188
Query: 193 DTKGERHGTPAERILA 208
K RHG ER+LA
Sbjct: 189 GDKHIRHGDEVERLLA 204
>gi|7270986|emb|CAB77630.1| spliceosome-associated essential protein [Candida albicans]
Length = 257
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 27/216 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++RN DA+ Y GN+DPQVTE L++ELF+Q GPV ++ +PKDR+ HQGYGFVEF++ D
Sbjct: 9 SDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEFKNSAD 68
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKS-----------------------LDVGANLF 115
A Y +++L I+LYGK +++ + +S +DVGA LF
Sbjct: 69 AKYTMEILRGIRLYGKALKLKRIDAKSQSSTNNPNNQTIGTFVQSDLINPNYIDVGAKLF 128
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
I NL+P VDE L DTFS FG ++ NP I RD + G+S G+GF++YD FE+SD I+ MN
Sbjct: 129 INNLNPLVDESFLMDTFSKFGTLIRNPIIRRDSE-GHSLGYGFLTYDDFESSDLCIQKMN 187
Query: 176 GQYLCNRQITVSYAYKK---DTKGERHGTPAERILA 208
L N +I +SYA+K D K RHG ER LA
Sbjct: 188 NTILMNNKIAISYAFKDSSVDGKKSRHGDQVERKLA 223
>gi|167539870|ref|XP_001741392.1| splicing factor 3B subunit [Entamoeba dispar SAW760]
gi|165894094|gb|EDR22178.1| splicing factor 3B subunit, putative [Entamoeba dispar SAW760]
Length = 199
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 137/189 (72%), Gaps = 4/189 (2%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N +A Y +LD +V E+LL+EL +QAGPVVNV +P+DR++N H+G G+VEF+ + DAD
Sbjct: 11 KNFEAIVYCSDLDEKVDEQLLYELMIQAGPVVNVSIPRDRISNQHKGIGYVEFQHDYDAD 70
Query: 81 YAIKVL-NMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
YA+KV + IKLYGK ++ ++ Q KKS+D+GANLF+ +D V E L D F FG I+
Sbjct: 71 YAVKVFGDNIKLYGKQVKFSRNVQLKKSVDIGANLFVSGIDDSVSETTLSDAFRNFGNII 130
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++ KI ++ TG + F FISYD+F+ASD AI MNGQ + +QI+V YA+ K+ KGER+
Sbjct: 131 SSVKIEKNEKTG--KNFAFISYDNFDASDKAIANMNGQMMGGKQISVEYAF-KNKKGERY 187
Query: 200 GTPAERILA 208
G +ER+LA
Sbjct: 188 GDASERLLA 196
>gi|344302677|gb|EGW32951.1| hypothetical protein SPAPADRAFT_150389 [Spathaspora passalidarum
NRRL Y-27907]
Length = 256
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 136/214 (63%), Gaps = 25/214 (11%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++RN +AT Y GN+DP+ TE L++ELF+Q GPV ++ +PKDR+ HQGYGFVEFRS +D
Sbjct: 23 SDRNPNATLYFGNIDPRATELLMYELFIQFGPVRSINMPKDRILRTHQGYGFVEFRSSKD 82
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKS----------------------LDVGANLFI 116
A+Y + +L ++LYGK +++ K + S +DVGA LFI
Sbjct: 83 AEYVLDILRGVRLYGKLVKLKKVDGKESSKRTQIGREGRGNVTESVVLPGYVDVGAKLFI 142
Query: 117 GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
NL+ VDEK L DTF FG ++ P + RD D G S GF F++YDSF +SD AIE MNG
Sbjct: 143 NNLNELVDEKFLSDTFGKFGTLIQTPIVKRD-DEGKSLGFAFLNYDSFNSSDLAIEKMNG 201
Query: 177 QYLCNRQITVSYAYKKDTKGE--RHGTPAERILA 208
L N +I+V YA+K ++ G+ RHG ER+LA
Sbjct: 202 VILMNSKISVGYAFKSESGGKRIRHGDKVERLLA 235
>gi|183230140|ref|XP_655332.2| splicing factor 3B subunit 4 [Entamoeba histolytica HM-1:IMSS]
gi|169803064|gb|EAL49944.2| splicing factor 3B subunit 4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710589|gb|EMD49637.1| splicing factor 3B subunit 4, putative [Entamoeba histolytica KU27]
Length = 199
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 136/189 (71%), Gaps = 4/189 (2%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N +A Y +LD +V E+LL+EL +QAGPVVN+ +P+DR++N H+G +VEF+ + DAD
Sbjct: 11 KNFEAIVYCSDLDEKVDEQLLYELMIQAGPVVNISIPRDRISNQHKGVAYVEFQHDYDAD 70
Query: 81 YAIKVL-NMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
YA+KV + IKLYGK ++ ++ Q KKS+D+GANLF+ +D V E L D F FG I+
Sbjct: 71 YAVKVFGDNIKLYGKQVKFSRNIQLKKSVDIGANLFVSGIDDSVSEIALSDAFRNFGNII 130
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++ KI ++ TG + F FISYD+F+ASD AI MNGQ + +QI+V YA+ K+ KGER+
Sbjct: 131 SSVKIEKNEKTG--KNFAFISYDNFDASDKAIANMNGQMMGGKQISVEYAF-KNKKGERY 187
Query: 200 GTPAERILA 208
G +ER+LA
Sbjct: 188 GDASERLLA 196
>gi|241951780|ref|XP_002418612.1| RNA binding protein, putative; spliceosome associated protein,
putative [Candida dubliniensis CD36]
gi|223641951|emb|CAX43915.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 259
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 135/218 (61%), Gaps = 31/218 (14%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++RN +A+ Y GN+DPQVTE L++ELF+Q GP+ ++ +PKDR+ HQGYGFVEF++ D
Sbjct: 11 SDRNIEASLYFGNIDPQVTELLMYELFIQFGPIKSINMPKDRILKTHQGYGFVEFKNSAD 70
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKS-------------------------LDVGAN 113
A Y + +L ++LYGK +++ + D KS +DVGA
Sbjct: 71 AKYTMDILRGVRLYGKALKLKRI--DAKSSAPTNSTNNQTIGTFVQSNLINPNYIDVGAK 128
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
LFI NL+P VDE L DTFS FG ++ NP I RD + G+S G GF++YD FE+SD I+
Sbjct: 129 LFINNLNPLVDESFLMDTFSKFGTLIRNPIIRRDSE-GHSLGHGFLTYDDFESSDLCIQK 187
Query: 174 MNGQYLCNRQITVSYAYKKDT---KGERHGTPAERILA 208
MN L N +IT++YA+K T K RHG ER LA
Sbjct: 188 MNNTILMNNKITINYAFKDSTIDGKKSRHGDQVERKLA 225
>gi|407037930|gb|EKE38853.1| splicing factor 3B subunit 4, putative [Entamoeba nuttalli P19]
Length = 199
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 136/189 (71%), Gaps = 4/189 (2%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N +A Y +LD +V E+LL+EL +QAGPV+N+ +P+DR++N H+G +VEF+ + DAD
Sbjct: 11 KNFEAIVYCSDLDEKVDEQLLYELMIQAGPVINISIPRDRISNQHKGVAYVEFQHDYDAD 70
Query: 81 YAIKVL-NMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
YA+KV + IKLYGK ++ ++ Q KKS+D+GANLF+ +D V E L D F FG I+
Sbjct: 71 YAVKVFGDNIKLYGKQVKFSRNIQLKKSVDIGANLFVSGIDDSVSEIALSDAFRNFGNII 130
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++ KI ++ TG + F FISYD+F+ASD AI MNGQ + +QI+V YA+ K+ KGER+
Sbjct: 131 SSVKIEKNEKTG--KNFAFISYDNFDASDKAIANMNGQMMGGKQISVEYAF-KNKKGERY 187
Query: 200 GTPAERILA 208
G +ER+LA
Sbjct: 188 GDASERLLA 196
>gi|441636543|ref|XP_004093131.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4
[Nomascus leucogenys]
Length = 372
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 88/114 (77%), Positives = 102/114 (89%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
ADYAIK++NMIKLYGKPIRVNKAS +LDVGAN+F+GNLDP++DEKLLYDT+
Sbjct: 67 ADYAIKIMNMIKLYGKPIRVNKASAHNXNLDVGANIFVGNLDPEIDEKLLYDTW 120
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
A +++G LD V E LL++ F G +V N + +D TG +G+GF+ + S E +D AI
Sbjct: 13 ATVYVGGLDEKVSEPLLWELFLQAGPVV-NTHMPKDRVTGQHQGYGFVEFLSEEDADYAI 71
Query: 172 EAMNGQYLCNRQITVSYA 189
+ MN L + I V+ A
Sbjct: 72 KIMNMIKLYGKPIRVNKA 89
>gi|440293376|gb|ELP86502.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
Length = 199
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 141/189 (74%), Gaps = 5/189 (2%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N ++T +LD QV+E LL+EL +QAGPV++V +P+DRV+ H+G G+VE++S+ DADY
Sbjct: 12 NVESTVCCTDLDQQVSEGLLYELMIQAGPVMSVSIPRDRVSGQHRGVGYVEYKSDRDADY 71
Query: 82 AIKVL-NMIKLYGKPIRVNKASQDKK-SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
++K+ + + L+GK ++ N+++Q ++ ++D+GANLF+ NLD VDE LL+ TF FG +V
Sbjct: 72 SVKIFSDNVYLFGKLVKFNRSNQVRRGAIDIGANLFVNNLDKSVDESLLHSTFCNFGNLV 131
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ PKI + DT + + + FI+YDSF+A+D AI +NGQ L +QI+V YA+ K+ +GER+
Sbjct: 132 SPPKI--NTDTKSGKVYAFINYDSFDAADKAIANLNGQMLSGKQISVEYAF-KNKRGERY 188
Query: 200 GTPAERILA 208
GT AER LA
Sbjct: 189 GTAAERFLA 197
>gi|255725032|ref|XP_002547445.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
gi|240135336|gb|EER34890.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
Length = 257
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 29/221 (13%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q AERN +A+ Y GN+DPQ E L++ELF+Q GP+ ++ +PKDR+ HQGYGFVEFR+
Sbjct: 8 QTDAERNSNASLYFGNIDPQADEILMYELFIQFGPIKSLNMPKDRILKTHQGYGFVEFRN 67
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNK----------------------ASQDKKS---LDV 110
+DA Y + +L ++L+GK +++ K S D + +DV
Sbjct: 68 IDDAKYTLDILRGVRLFGKALKLKKIDSRSSTTSTSNNALNQTIGTFVSSDLINPNYIDV 127
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
GA LFI NL+P +DEK L DTFS FG ++ P I RD + G S G F++YD FE+SD
Sbjct: 128 GAKLFINNLNPLIDEKFLADTFSKFGTLIRTPAIRRDSE-GQSMGNAFLTYDDFESSDLC 186
Query: 171 IEAMNGQYLCNRQITVSYAYKK---DTKGERHGTPAERILA 208
I+ MN L N +I+V+YA+K+ D K RHG ER LA
Sbjct: 187 IQKMNNAILMNNKISVTYAFKEQSVDGKRARHGDEVERRLA 227
>gi|406602156|emb|CCH46282.1| Spliceosome-associated protein 49 [Wickerhamomyces ciferrii]
Length = 210
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 129/196 (65%), Gaps = 9/196 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
++RNQD T YVGNLD +V + LL+ELF+Q P+ N+++PKDR+ HQGYGFVEF++ +
Sbjct: 7 ESDRNQDCTVYVGNLDEKVHDGLLYELFIQIAPIKNIHLPKDRILRTHQGYGFVEFKNVK 66
Query: 78 DADYAIKVLNMIKLYGKPIRV-----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
D +YA K++N IKLYGK +RV N ++ DK LD GA LFI NLD VDE LL F
Sbjct: 67 DTEYAEKIMNGIKLYGKNLRVNRASNNASNNDK--LDTGATLFIKNLDDLVDENLLQTIF 124
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FGV P I RD + GNS+ GFI Y +F+ SD AI MN Q + N+++ + YA KK
Sbjct: 125 KQFGVFFKPPVISRD-EQGNSKHHGFIYYKTFKDSDNAIAKMNNQMILNKKVQIDYALKK 183
Query: 193 DT-KGERHGTPAERIL 207
K +HG ER+L
Sbjct: 184 KNGKAVKHGDQVERLL 199
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 135/194 (69%), Gaps = 4/194 (2%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++N+D T ++ ++ VTEE+L ELF+Q GPVV V +P+DR+TN GY FVEFR+E+D
Sbjct: 7 DQNKDCTLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDC 66
Query: 80 DYAIKVLNMIKLYGKPIRVNKAS--QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
YA+ V+ +KL+G P++++ S LDVGA L+IGNL DV++ L TF FG
Sbjct: 67 MYALSVMQGVKLFGVPLKLSANSTPSTGDELDVGAKLYIGNLSQDVNDGNLLQTFRQFGN 126
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-G 196
++ + +++ DP TG S G GF++YDSF+A+D A +AMNG+Y + ITVSYAYK TK G
Sbjct: 127 VL-HARVVVDPATGKSLGHGFVAYDSFDAADKAKKAMNGEYFGGQPITVSYAYKSGTKSG 185
Query: 197 ERHGTPAERILAAN 210
E+HG +ER +A N
Sbjct: 186 EKHGDRSERSVAPN 199
>gi|354548123|emb|CCE44859.1| hypothetical protein CPAR2_406620 [Candida parapsilosis]
Length = 248
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 131/212 (61%), Gaps = 26/212 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERN +A+ Y GN+DPQ TE L++ELFVQ GPV N+ +PKDRV HQGYGFVEF++ D
Sbjct: 11 SERNTNASLYFGNIDPQCTELLMYELFVQFGPVKNINMPKDRVLKTHQGYGFVEFKNPLD 70
Query: 79 ADYAIKVLNMIKLYG----------KP---------IRVNKASQ--DKKSLDVGANLFIG 117
A Y +L ++L+G KP VN S+ K +DVGA++F+
Sbjct: 71 AKYTEDILRGVRLHGKLLKLKKLESKPQTLQRQQIGTFVNSKSELLSDKYIDVGASVFVN 130
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NL+P +DEK L +TFS FG I+ P+I RD + GNS GFGF+++ FE SD IE +N
Sbjct: 131 NLNPLIDEKFLMNTFSKFGTIIKEPEIKRDHE-GNSMGFGFVTFGDFETSDLVIEKLNNT 189
Query: 178 YLCNRQITVSYAYKKDT----KGERHGTPAER 205
L N +I++ YA+K + K RHG AER
Sbjct: 190 ILMNSKISLDYAFKNELGENGKKVRHGDEAER 221
>gi|83771650|dbj|BAE61780.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871241|gb|EIT80403.1| splicing factor 3b, subunit 4 [Aspergillus oryzae 3.042]
Length = 139
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G E++++AT Y+GNLD +VT+ L+WEL +QAG +VNV++PKDRVT HQGYGFVEF
Sbjct: 3 GARHWEQDKEATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFI 62
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFS 133
SEEDA+YA +++N I+LYGKPIRVNKAS DK KS+++GA LF+GNLDP V E++LY+TFS
Sbjct: 63 SEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIGAELFVGNLDPMVTEQVLYNTFS 122
Query: 134 AFGVIVTNPKIM 145
FG ++ PK+M
Sbjct: 123 RFGNLINLPKVM 134
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 103 QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYD 162
QDK+ A ++IGNLD V + L+++ G IV N + +D T + +G+GF+ +
Sbjct: 9 QDKE-----ATVYIGNLDERVTDSLVWELMLQAGRIV-NVHLPKDRVTQSHQGYGFVEFI 62
Query: 163 SFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTL 222
S E ++ A MNG L + I V+ A K G AE + +P + +
Sbjct: 63 SEEDAEYASRIMNGIRLYGKPIRVNKASADKQKSVEIG--AELFVGNLDPMVTEQVLYNT 120
Query: 223 FASGPPSLQNAPQANGTV 240
F S +L N P+ T+
Sbjct: 121 F-SRFGNLINLPKVMSTI 137
>gi|448523344|ref|XP_003868880.1| Hsh49 protein [Candida orthopsilosis Co 90-125]
gi|380353220|emb|CCG25976.1| Hsh49 protein [Candida orthopsilosis]
Length = 248
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 26/212 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AERN +A+ Y GN+DPQ +E L++ELFVQ GP+ N+ +PKDRV HQGYGFVEF+ D
Sbjct: 11 AERNTNASLYFGNIDPQCSELLMYELFVQFGPIKNINMPKDRVLKTHQGYGFVEFKHALD 70
Query: 79 ADYAIKVLNMIKLYG----------KP-----------IRVNKASQDKKSLDVGANLFIG 117
A Y +L ++LYG KP I + K +DVGA LF+
Sbjct: 71 AKYTEDILRGVRLYGKLLKLKKLDSKPQAQQRQQIGTFINTKQELLSDKYIDVGAKLFVN 130
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NL+ +DE+ L +TFS FG ++ P+I RD + GNS GFGF+++ FE SD IE +N
Sbjct: 131 NLNRLIDERFLLNTFSKFGTVIKQPEIKRDHE-GNSMGFGFVTFGDFETSDLVIEKLNNT 189
Query: 178 YLCNRQITVSYAYKKDT----KGERHGTPAER 205
L N +I++ YA+K + K RHG AER
Sbjct: 190 ILMNSKISLDYAFKSELGENGKKVRHGDEAER 221
>gi|149240013|ref|XP_001525882.1| hypothetical protein LELG_02440 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450005|gb|EDK44261.1| hypothetical protein LELG_02440 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 241
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 128/217 (58%), Gaps = 28/217 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERN +A+ Y GNLDP+ E L++ELF Q GP+ N+ +PKDRV+ +HQGYGFVEF+ D
Sbjct: 11 SERNSNASLYFGNLDPECLELLMYELFSQFGPIRNINMPKDRVSKMHQGYGFVEFKDARD 70
Query: 79 ADYAIKVLNMIKLYG----------KPIRVNKASQ-------------DKKSLDVGANLF 115
A Y +L ++LYG KP ++ + + + +DVGA L+
Sbjct: 71 AKYTEDILRGVRLYGKLLKLKKLDSKPSTQYQSERSVGTYVTPKLDLLNDRYVDVGAKLY 130
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
I NL+P +DEK L TF FG ++ P I RD + G S G GFI++ FE SD IE MN
Sbjct: 131 ISNLNPLIDEKFLLQTFLNFGTVIKQPVIRRDLE-GKSMGSGFITFADFETSDEVIEKMN 189
Query: 176 GQYLCNRQITVSYAYK----KDTKGERHGTPAERILA 208
L N +I+++YA+K K K RHG AERILA
Sbjct: 190 NTILMNSKISLAYAFKEGATKGGKKIRHGDKAERILA 226
>gi|255715615|ref|XP_002554089.1| KLTH0E14036p [Lachancea thermotolerans]
gi|238935471|emb|CAR23652.1| KLTH0E14036p [Lachancea thermotolerans CBS 6340]
Length = 209
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 9/189 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGN+DP+V++ELL+ELF+Q GPV + PKD+V HQG+ FVEF S +DA+YA K
Sbjct: 11 TVYVGNVDPKVSKELLYELFLQIGPVAKIRYPKDKVLQTHQGFAFVEFNSPQDAEYASKC 70
Query: 86 L-NMIKLYGKPIRVNKAS------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
L N ++LY + ++V KA+ + +LDVGA LFI N+D VD ++L F FG +
Sbjct: 71 LNNTVRLYDRTLKVRKANGASSSPTSQNALDVGAKLFIKNIDELVDSEMLTKIFGKFGSL 130
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
V P+I G R +I Y +FE SDAA+E +N Q + N+ I++ YAYK+ +K E+
Sbjct: 131 VRPPEIFT-LKQGLLRC-AYICYSTFEHSDAALEKLNNQMVMNKCISIDYAYKEGSKTEK 188
Query: 199 HGTPAERIL 207
HG ER+L
Sbjct: 189 HGDEVERLL 197
>gi|70935983|ref|XP_739002.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56515660|emb|CAH87238.1| hypothetical protein PC302382.00.0 [Plasmodium chabaudi chabaudi]
Length = 147
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 103/130 (79%), Gaps = 1/130 (0%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ERN +AT Y+ NLD QV EE+L ELF+Q G V NV++P+D++ H GYGFVE+ E +
Sbjct: 15 ERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYEC 74
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+YA KVLNM +L+GKP+R NKA+QDKKS DVGANLFIGNLD +V+EK+L+D FS+FG ++
Sbjct: 75 EYAGKVLNMTRLFGKPLRCNKATQDKKSFDVGANLFIGNLDTEVEEKMLFDIFSSFGQVI 134
Query: 140 TNPKIMRDPD 149
+ KI+R+ D
Sbjct: 135 S-VKIVRNED 143
>gi|254572433|ref|XP_002493326.1| hypothetical protein [Komagataella pastoris GS115]
gi|238033124|emb|CAY71147.1| hypothetical protein PAS_chr3_1252 [Komagataella pastoris GS115]
gi|328352657|emb|CCA39055.1| Polyadenylate-binding protein 1-B [Komagataella pastoris CBS 7435]
Length = 215
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 10/197 (5%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N D T YVGNL P+V E++++EL VQ P+ + +PKDRV H GY FVE + +Y
Sbjct: 2 NNDITLYVGNLAPEVDEKIIYELLVQIAPIRKLKLPKDRVLRKHLGYCFVELDNPTSCEY 61
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDV------GANLFIGNLDPDVDEKLLYDTFSAF 135
A K+LN + +Y +PI+V ++ DK++ + G LF+GNLD VDEK L +
Sbjct: 62 AEKLLNGLYIYNRPIKVKRSIVDKQNKLITEDNVLGTKLFLGNLDRLVDEKYLVGLMKNY 121
Query: 136 GV---IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
GV ++ P+I RD TG S G+G +++ FE D I+ +NGQ+L N+++ V YA K
Sbjct: 122 GVHDQLLKPPEIKRDIHTGESMGYGILNFRDFETCDLVIKKLNGQFLMNKKVKVEYAKKS 181
Query: 193 DTKGERHGTPAERILAA 209
+ KG HG +ER+LA+
Sbjct: 182 NGKG-YHGDKSERLLAS 197
>gi|45185171|ref|NP_982888.1| ABL059Wp [Ashbya gossypii ATCC 10895]
gi|44980807|gb|AAS50712.1| ABL059Wp [Ashbya gossypii ATCC 10895]
gi|374106091|gb|AEY95001.1| FABL059Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 6/192 (3%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++N + T YVGNLDPQV++ELL+ELFVQ PV + PKD+V HQG+ FVE SE D
Sbjct: 2 DQNTECTVYVGNLDPQVSKELLYELFVQVAPVSRIRYPKDKVKQEHQGFAFVELFSEADC 61
Query: 80 DYAIKVL-NMIKLYGKPIRVNKASQDKKS---LDVGANLFIGNLDPDVDEKLLYDTFSAF 135
D+AIK L N + L+GK ++V + ++ K+ + A LF+ NLD +D L F F
Sbjct: 62 DFAIKSLNNTVSLFGKVLKVRRTLENAKNSAPVFARAKLFVKNLDSTIDAVQLQKLFGKF 121
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G + P++ D G R ++ + +F SD A+E +N Q + N+ I++ YA+K+
Sbjct: 122 GPLAKPPQLFTLKD-GALRC-AYVYFTTFRHSDEALEKLNNQIVANQIISIDYAFKEGKA 179
Query: 196 GERHGTPAERIL 207
GE+HG P ER+L
Sbjct: 180 GEKHGDPVERLL 191
>gi|161899049|ref|XP_001712751.1| mRNA splicing factor 3b4 [Bigelowiella natans]
gi|75756244|gb|ABA27139.1| mRNA splicing factor 3b4 [Bigelowiella natans]
Length = 208
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 121/190 (63%), Gaps = 2/190 (1%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N + + NLD +V EE+LWELF+Q GP+ ++++P+D +++ H GY F+E+ +E DA+
Sbjct: 15 KNLNTSLLATNLDLKVNEEILWELFLQTGPLRSIFLPRDPLSDRHFGYAFIEYETELDAN 74
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
Y IK+L+ ++L+ K I +NK S + S GA L+IGN++ + DEKL+Y TFS+FG IV
Sbjct: 75 YTIKILSPLRLFNKLISINKLSHE-GSYSTGACLYIGNINKNTDEKLIYSTFSSFGNIVK 133
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
P + + + + I+YDS++++DAAI MNGQ ITV Y Y + +
Sbjct: 134 APILSKTFTNKGVKYYALITYDSYDSADAAIYNMNGQMFNGNVITVDYFYSASSTRIK-T 192
Query: 201 TPAERILAAN 210
+ ER++ N
Sbjct: 193 SVVERMINEN 202
>gi|159163578|pdb|1X5U|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 3b
Length = 105
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 79/90 (87%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT HQGYGFVEF SEED
Sbjct: 10 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 69
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
ADYAIK+++MIKLYGKPIRVNKAS K+L
Sbjct: 70 ADYAIKIMDMIKLYGKPIRVNKASAHNKNL 99
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
A +++G LD V E LL++ F G +V N + +D TG +G+GF+ + S E +D AI
Sbjct: 16 ATVYVGGLDEKVSEPLLWELFLQAGPVV-NTHMPKDRVTGQHQGYGFVEFLSEEDADYAI 74
Query: 172 EAMNGQYLCNRQITVSYA 189
+ M+ L + I V+ A
Sbjct: 75 KIMDMIKLYGKPIRVNKA 92
>gi|367009880|ref|XP_003679441.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
gi|359747099|emb|CCE90230.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
Length = 210
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 128/209 (61%), Gaps = 17/209 (8%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGN+DP+VT+E L+ELFVQ P+ N+ PKD+V LHQG+ FVEF + ED Y +
Sbjct: 9 ETTVYVGNIDPKVTKENLYELFVQVSPIANIRYPKDKVLQLHQGFAFVEFYTPEDCQYVV 68
Query: 84 KVL-NMIKLYGKPIRVNKA---SQDKKSLDVG----ANLFIGNLDPDVDEKLLYDTFSAF 135
++L N ++LY + ++V KA S ++DV A +F+ NLDP +DE L F F
Sbjct: 69 QLLNNTVQLYDRFLKVRKANVQSSGSDTIDVTIQPIAKVFVKNLDPSIDEPHLSRLFGKF 128
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G + P+I D G R +I + +++ SD A+ +NGQ + N+++TV YA+K++ K
Sbjct: 129 GPLAKGPEIFYLSD-GQLRC-AYIYFKNYDHSDLALATLNGQLVVNKKVTVDYAFKENGK 186
Query: 196 GE-RHGTPAERILAANNPSSQKSRPHTLF 223
G ++G +R+L ++++R H L
Sbjct: 187 GNAKYGEDVDRLL------NREARKHGLL 209
>gi|363755690|ref|XP_003648060.1| hypothetical protein Ecym_7420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892096|gb|AET41243.1| hypothetical protein Ecym_7420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 115/192 (59%), Gaps = 6/192 (3%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++N T YVGNLD QVT+E L+ELFVQ GPV + KD++T +QG+ FVEF + D
Sbjct: 2 DQNNLYTIYVGNLDGQVTKEHLYELFVQMGPVYRIRYRKDKITQEYQGFAFVEFYTNSDC 61
Query: 80 DYAIKVL-NMIKLYGKPIRVNKASQDKKS---LDVGANLFIGNLDPDVDEKLLYDTFSAF 135
++AIK L N + L+GK ++V + ++ L GA LF+ NLD VD + L F F
Sbjct: 62 EFAIKSLNNSVSLFGKILKVRRTLENTHYGGPLISGAKLFVKNLDDSVDFQQLQKLFGKF 121
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G +V P+I + + +I Y +F+ SD A++ +N Q L NR I++ YA+K
Sbjct: 122 GPLVKQPEIFTLKN--GTLKCAYIYYSTFKHSDEALQKLNKQILANRVISIDYAFKDGNS 179
Query: 196 GERHGTPAERIL 207
G++HG ER+L
Sbjct: 180 GDKHGDEIERLL 191
>gi|320582964|gb|EFW97181.1| RRM 1 multi-domain protein [Ogataea parapolymorpha DL-1]
Length = 981
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 16/193 (8%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+ +++ + Y+GNLDP+V E LL+ELFVQ PV ++ +PKD+V HQGYGFVEF + +D
Sbjct: 5 QNDKEVSLYLGNLDPKVDETLLYELFVQFAPVKSIRLPKDKVLRRHQGYGFVEFFNVKDC 64
Query: 80 DYAIKVLNMIKLYGKPIRVNKA--------SQDKKSLDVGANLFIGNLDPDVDEKLLYDT 131
+Y + + + + LY K +RV K D+ D+G +++GNLD VD + T
Sbjct: 65 EYVLNICSGLSLYDKVLRVKKLIGGQTETPELDE---DIGPVVYVGNLDKLVDSGSISAT 121
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
F+ FG P+++ P G FI Y FE+SD AI+ MNG+ + NR I + YAYK
Sbjct: 122 FANFGTFRKPPQVV--P--GEKSNHAFIYYTDFESSDEAIKEMNGKIIMNRPIKMDYAYK 177
Query: 192 KDTKGERHGTPAE 204
KD+K E+HG E
Sbjct: 178 KDSK-EKHGDRTE 189
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 104 DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDS 163
D K D +L++GNLDP VDE LLY+ F F V + ++ +D +G+GF+ + +
Sbjct: 2 DAKQNDKEVSLYLGNLDPKVDETLLYELFVQFAP-VKSIRLPKDKVLRRHQGYGFVEFFN 60
Query: 164 FEASDAAIEAMNGQYLCNRQITV 186
+ + + +G L ++ + V
Sbjct: 61 VKDCEYVLNICSGLSLYDKVLRV 83
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF GPV ++ V +D VT GY +V F + ED + A+
Sbjct: 80 ASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALD 139
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D +G N+FI NLDP +D K L+DTFSAFG I++ K
Sbjct: 140 ELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILS-CK 198
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D + GN++G+GF+ +DS E+++AAIE +NG L ++++ V +
Sbjct: 199 VAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGH 242
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 30/209 (14%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G H + R + + Y+ NLD ++TE+ +LF Q G + ++ + KD+ +
Sbjct: 240 VGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-ND 298
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKK 106
+G+GFV + + E A A+ LN + GK + V +A + +K
Sbjct: 299 KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKM 358
Query: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
+ G NLFI NL +VD++ L FSAFG I T+ KIM D + G S+GFGF+ Y + E
Sbjct: 359 NKYQGVNLFIKNLQDEVDDERLKAEFSAFGTI-TSAKIMTD-EQGKSKGFGFVCYTTPEE 416
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
++ A+ MN + L + + V+ A +K+ +
Sbjct: 417 ANKAVTEMNQRMLAGKPLYVALAQRKEVR 445
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLDP + + L + F G +++ V D + N +GYGFV F S E A+ AI+ +N
Sbjct: 171 FIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNA-KGYGFVHFDSVESANAAIEHVN 229
Query: 88 MIKLYGKPIRV-NKASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + S+ ++ V A N++I NLD ++ E+ D F FG I T
Sbjct: 230 GMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEI-T 288
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ +++D + RGFGF++Y + E + A++ +N + +++ V A KK + E
Sbjct: 289 SLSLVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREE 344
>gi|159163577|pdb|1X5T|A Chain A, Solution Structure Of The Second Rrm Domain In Splicing
Factor 3b
Length = 96
Score = 142 bits (357), Expect = 3e-31, Method: Composition-based stats.
Identities = 67/85 (78%), Positives = 79/85 (92%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+ +FIGNLDP++DEKLLYDTFSAFGVI+ PKIMRDPDTGNS+G+ FI++ SF+ASDAAI
Sbjct: 6 SGIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 65
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKG 196
EAMNGQYLCNR ITVSYA+KKD+KG
Sbjct: 66 EAMNGQYLCNRPITVSYAFKKDSKG 90
Score = 47.0 bits (110), Expect = 0.015, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++GNLDP++ E+LL++ F G ++ + +D T +GY F+ F S + +D AI+ +
Sbjct: 9 FIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAM 68
Query: 87 NMIKLYGKPIRVNKA 101
N L +PI V+ A
Sbjct: 69 NGQYLCNRPITVSYA 83
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
AE Q+A+ YVG+L P+VTE L+E F Q G V+++ V +D V+ GY +V ++ D
Sbjct: 2 AEHQQNASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHAD 61
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGV 137
A +A++ LN K++ KP R+ A ++ + GA N+FI NL+ ++D K LYDTFSAFG
Sbjct: 62 AKHALEELNFEKIHDKPCRIMWAQRNPAARRSGAGNIFIKNLNKEIDNKALYDTFSAFGT 121
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I++ K+ D + G SRG+GF+ ++ E + AI+ +NG+ L + +TV+ + + +
Sbjct: 122 ILS-CKVAAD-EKGESRGYGFVHFEKEEDAQKAIDTVNGKMLLKQVVTVTKFLSRKEREQ 179
Query: 198 RHGTPAERILAANNPSS 214
+ G I N P S
Sbjct: 180 QGGRTYTNIYVKNLPDS 196
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 22/184 (11%)
Query: 28 YVGNL-DPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL D T + L +LF + G + + ++ KD + +G+GFV F + E A+ A++ +
Sbjct: 189 YVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDE-NDKSRGFGFVNFENSEAANAAVEAM 247
Query: 87 NMI------KLY-GKPIRV-----------NKASQDKKSLDVGANLFIGNLDPDVDEKLL 128
N KL+ G+ ++ +K Q++ + +NL+I +L DV E L
Sbjct: 248 NEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVTEDAL 307
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
D FS FG I T+ KIM D + G+SRGFGF+++DS + + AAI+ M+G + + + V+
Sbjct: 308 RDKFSKFGTI-TSLKIMTD-NNGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLYVAL 365
Query: 189 AYKK 192
A +K
Sbjct: 366 ALRK 369
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q E+N+++ Y+ +L VTE+ L + F + G + ++ + D + +G+GFV F
Sbjct: 280 IRQERDEKNKNSNLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTDNNGD-SRGFGFVNF 338
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRV 98
S ++A AI+ ++ + GKP+ V
Sbjct: 339 DSADEAAAAIQEMHGSMIDGKPLYV 363
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF GPV ++ V +D VT GY +V F + ED + A+
Sbjct: 66 ASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALD 125
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D +G N+FI NLDP +D K L+DTFSAFG I++ K
Sbjct: 126 ELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILS-CK 184
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D + GN++G+GF+ +DS E+++AAIE +NG L ++++ V +
Sbjct: 185 VAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGH 228
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 30/209 (14%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G H + R + + Y+ NLD ++TE+ +LF Q G + ++ + KD+ +
Sbjct: 226 VGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-ND 284
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKK 106
+G+GFV + + E A A+ LN + GK + V +A + +K
Sbjct: 285 KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKAYEQMKLEKM 344
Query: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
+ G NLFI NL +VD++ L FSAFG I T+ KIM D + G S+GFGF+ Y + E
Sbjct: 345 NKYQGVNLFIKNLQDEVDDERLKAEFSAFGTI-TSAKIMTD-EQGKSKGFGFVCYTTPEE 402
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
++ A+ MN + L + + V+ A +K+ +
Sbjct: 403 ANKAVTEMNQRMLAGKPLYVALAQRKEVR 431
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLDP + + L + F G +++ V D + N +GYGFV F S E A+ AI+ +N
Sbjct: 157 FIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGN-AKGYGFVHFDSVESANAAIEHVN 215
Query: 88 MIKLYGKPIRV-NKASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + S+ ++ V A N++I NLD ++ E+ D F FG I T
Sbjct: 216 GMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEI-T 274
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ +++D + RGFGF++Y + E + A++ +N + +++ V A KK + E
Sbjct: 275 SLSLVKDQND-KPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREE 330
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 113/192 (58%), Gaps = 4/192 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L++LF Q G VV+V V +D T GYG+V + +++DA AI
Sbjct: 40 TSLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAID 99
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN L K IRV+ + +D GA N+FI NLD +D K L++TFS+FG I++ K
Sbjct: 100 VLNFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIIS-CK 158
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTP 202
I D +G S+G+GF+ YDS EA+ AI+ +NG + ++Q+ V + K+D E T
Sbjct: 159 IATDA-SGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQDRDSEMSKTK 217
Query: 203 AERILAANNPSS 214
I N S
Sbjct: 218 FNNIYVKNLSDS 229
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 22/189 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL +E+ L + F + G + +V V +D + +GFV F + EDA A+ LN
Sbjct: 222 YVKNLSDSTSEDDLRKTFGEYGTITSVVVMRD-ADGKSKCFGFVNFENPEDAAKAVDALN 280
Query: 88 MIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNLDPDVDEKLLY 129
K K V KA Q K +V G NL++ NLD +D++ L
Sbjct: 281 GKKFDDKEWYVGKA-QKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDEKLK 339
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS +G I T+ K+MRDP +G SRG GF+++ + E + A+ MNG+ + ++ + V+ A
Sbjct: 340 ELFSEYGTI-TSCKVMRDP-SGISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALA 397
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 398 QRKEERRAR 406
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L E F G +++ + D + +GYGFV++ SEE A AI LN
Sbjct: 131 FIKNLDKSIDIKALHETFSSFGTIISCKIATD-ASGQSKGYGFVQYDSEEAAQTAIDKLN 189
Query: 88 MIKLYGKPIRV----NKASQDKK-SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ + K + V K +D + S N+++ NL E L TF +G I T+
Sbjct: 190 GMLMNDKQVYVGVFLRKQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTI-TSV 248
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+MRD D G S+ FGF+++++ E + A++A+NG+ +++ V A KK +
Sbjct: 249 VVMRDAD-GKSKCFGFVNFENPEDAAKAVDALNGKKFDDKEWYVGKAQKKSER 300
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ ++ Q YV NLD + +E L ELF + G + + V +D + + +G GFV F +
Sbjct: 313 KEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDP-SGISRGSGFVAFST 371
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 372 PEEASRALGEMNGKMIVSKPLYVALAQRKEE 402
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 107/163 (65%), Gaps = 3/163 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LDP V+E L+E+F Q G VV++ V +D +T GY +V + + +DA A+++
Sbjct: 27 SLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDASQALEL 86
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ + +D G AN+FI NL+ +D K L+DTFSAFG I++ +
Sbjct: 87 LNFTLVKGKPIRIMYSHRDPSIRKSGAANIFIKNLEKSIDNKALHDTFSAFGTILSCRVV 146
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
M D GNS+G+GF+ ++ E++ AIE +NG + +RQ++V+
Sbjct: 147 M--DDAGNSKGYGFVQFEKEESAQIAIEKVNGMLINDRQVSVA 187
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 7/182 (3%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ A ++ NL+ + + L + F G +++ V D N +GYGFV+F EE
Sbjct: 107 SIRKSGAANIFIKNLEKSIDNKALHDTFSAFGTILSCRVVMDDAGN-SKGYGFVQFEKEE 165
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFS 133
A AI+ +N + + + + V K +D S N+++ NL ++ L F+
Sbjct: 166 SAQIAIEKVNGMLINDRQVSVAPFIRKQERDMASSKNFNNVYVKNLAEATTDEDLRKVFA 225
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG I ++ +MRD D G S+ FGF+++++ + + A+E +NG+ + ++ V A KK
Sbjct: 226 GFGPI-SSAVVMRDAD-GKSKCFGFVNFENVDDAANAVENLNGKLINEKEWYVGRAQKKS 283
Query: 194 TK 195
+
Sbjct: 284 ER 285
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 30/194 (15%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL T+E L ++F GP+ + V +D + +GFV F + +DA A++ L
Sbjct: 206 VYVKNLAEATTDEDLRKVFAGFGPISSAVVMRD-ADGKSKCFGFVNFENVDDAANAVENL 264
Query: 87 NMIKLYGKPI--------RVNKASQDKKSLDV--------------GANLFIGNLDPDVD 124
N GK I R K S+ + L G NL++ N+D +D
Sbjct: 265 N-----GKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDDSID 319
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
++ L + F+ FG VT+ K+M+ P G S G GF+++ + E + A+ MNG+ + ++ +
Sbjct: 320 DEKLRELFAVFGT-VTSCKVMKSPQ-GQSMGSGFVTFSAPEEAMQAVNDMNGKMVGSKPL 377
Query: 185 TVSYAYKKDTKGER 198
V+ A +K+ + R
Sbjct: 378 YVALAQRKEERRAR 391
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+LDPDV E LY+ F+ G +V+ ++ RD T S G+ +++Y + + + A+E
Sbjct: 27 SLYVGDLDPDVSESELYEVFNQIGQVVS-IRVCRDLMTKKSLGYAYVNYGTHQDASQALE 85
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + + I + Y+++
Sbjct: 86 LLNFTLVKGKPIRIMYSHR 104
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG LDPQVTE +L+E+F GPV +V V +D VT GY +V + + D + A+
Sbjct: 75 SLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALDQ 134
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN ++ GKP R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K+
Sbjct: 135 LNYSQIRGKPCRIMWSQRDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFGTVLS-CKV 193
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D D+G S+G+GF+ YDS EA++AAI+A+NG L ++++ V
Sbjct: 194 ATD-DSGLSKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKVFV 234
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 30/210 (14%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQH + + + + YV NLD +V EE LF Q GP+ + + KD
Sbjct: 233 FVGQHISRKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEG 292
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSLDV--------- 110
N +G+GFV F + EDA A++ L+ +++GKP+ R K S+ ++ L
Sbjct: 293 N-SKGFGFVNFENHEDAQRAVEELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEK 351
Query: 111 -----GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
G+NL+I NL+ DVD++ L F FG I T+ K+MRD + G S+GFGF+ + S +
Sbjct: 352 AGKYQGSNLYIKNLEDDVDDEKLRAEFEPFGTI-TSCKVMRD-EKGTSKGFGFVCFSSPD 409
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ A+ MN + + + + V+ A +KD +
Sbjct: 410 EATRAMSEMNNKIVGTKPLYVALAQRKDVR 439
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G V++ V D + L +GYGFV + S E A+ AIK +N
Sbjct: 165 FIKNLDQGIDNKALHDTFAAFGTVLSCKVATDD-SGLSKGYGFVHYDSNEAAEAAIKAVN 223
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + R + S+ + NL++ NLD +V E+ FS FG I +
Sbjct: 224 GMLLNDKKVFVGQHISRKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITS 283
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+++ + GNS+GFGF+++++ E + A+E ++ + + + + V A KK + E
Sbjct: 284 --AVIQKDEEGNSKGFGFVNFENHEDAQRAVEELDNKEIHGKPVFVGRAQKKSEREE 338
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 108/165 (65%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G LDP VTE +L+ELF GPV ++ V +D VT GY +V F + ED + A+
Sbjct: 69 ASLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALD 128
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D +G N+FI NLDP +D K L+DTFSAFG I++ K
Sbjct: 129 ELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILS-CK 187
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D + GNS+G+GF+ +DS ++++AAIE +NG L ++++ V +
Sbjct: 188 VAVD-ELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKVYVGH 231
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 30/209 (14%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G H + R++ + YV NLD TEE +LF + G + ++ + KD
Sbjct: 229 VGHHISRRDRQSKFEALKANFTNVYVKNLDLDTTEEEFTKLFEKYGKITSLSLAKDNAGK 288
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKK 106
+G+ FV F + + A A+ LN + GK + V +A + +K
Sbjct: 289 F-RGFAFVNFATHDSAQQAVDELNDFEYKGKKLYVGRAQKKHERQEELRKQYEQMKLEKI 347
Query: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
+ G NLF+ NL ++D++ L FSAFG I T+ K+M D + S+GFGF+ Y + E
Sbjct: 348 NKYQGVNLFVKNLQDEIDDERLKSEFSAFGTI-TSAKVMTD-ENNKSKGFGFVCYSNPEE 405
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ AI MN + L + + V+ A +K+ +
Sbjct: 406 ATKAIAEMNQRMLAGKPLYVALAQRKEVR 434
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V F DA+ A++
Sbjct: 28 ASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMADAERALE 87
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG--ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN + G+ R+ SQ SL G N+FI NLDP +D K L+DTFSAFG I++
Sbjct: 88 TLNYSMIKGRSCRI-MWSQRDPSLRKGNNGNIFIKNLDPSIDHKALHDTFSAFGNILS-C 145
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
KI D + GNS+G+GF+ Y++ EA+++AI+++NG L +R++ V + + + + G
Sbjct: 146 KIAHD-EQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHHISRKERESKLG 202
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 19/192 (9%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q YV N+ VT+E L +LF + G + + + +D +G+GFV F +DA
Sbjct: 205 RVQFTNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDD-DGTSKGFGFVNFEKHQDAQ 263
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ L+ G+ + V++A + +K S G NL++ NLD D+
Sbjct: 264 NAVDDLHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVNLYVKNLDDDM 323
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L D FS +GVI T+ KIMRD T SRGFGF+ + S E + A+ MNG+ + ++
Sbjct: 324 DDDRLRDEFSVYGVI-TSAKIMRDEKTNISRGFGFVCFTSPEDATRAVTEMNGRIIGSKP 382
Query: 184 ITVSYAYKKDTK 195
I V+ A +K+ +
Sbjct: 383 IYVAIAQRKEVR 394
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +DR T GY V F+ EDA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDRSIDSKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ E ++ AIE MNG +L +R++ V + ++D + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAE 182
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D N +GYGFV F ++E+A+ AI+ +N
Sbjct: 102 FVKNLDRSIDSKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEEAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ + ++GA N++I NL D+D++ L FS FG ++
Sbjct: 160 GMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQGLFSKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKK 269
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 31/195 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NL + +E L LF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNLGEDMDDERLQGLFSKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDV----------GANLFIGNLD 120
L GK I V +A QDK ++ G NL++ NLD
Sbjct: 253 GKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKNLD 312
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D++ L FS FG I + M + G S+GFGF+ + S E + A+ MNG+ +
Sbjct: 313 DGIDDERLRKEFSPFGTITSAKVTM---EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 369
Query: 181 NRQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 370 TKPLYVALAQRKEER 384
>gi|384493509|gb|EIE84000.1| hypothetical protein RO3G_08705 [Rhizopus delemar RA 99-880]
Length = 624
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 107/163 (65%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V F + D + A++
Sbjct: 44 ASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERALE 103
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G+ N+FI NLDP +D K L+DTFSAFG I++ K
Sbjct: 104 SLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDPSIDNKALHDTFSAFGNILS-CK 162
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
I D ++GNS+G+GF+ Y++ EA+D AI+ +NG L ++++ V
Sbjct: 163 IALD-ESGNSKGYGFVHYETEEAADNAIKHVNGMLLNDKKVYV 204
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R + YV NLD V +E E+ + GP+ + V D +G+GFV F + EDA
Sbjct: 221 RAKFTNVYVKNLDESVKDEEFNEMLAKFGPITSALVQTDD-EGKSKGFGFVNFENHEDAQ 279
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ LN + GK + V +A + +K + G NL+I NLD D+
Sbjct: 280 KAVDALNETEHKGKILYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDI 339
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L FS +GVI T+ K+M D + S+GFGF+ + S + + A+ MNG+ + ++
Sbjct: 340 DDEKLRQEFSVYGVI-TSAKVMCD-EKDTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKP 397
Query: 184 ITVSYAYKKDTK 195
I V+ A +K+ +
Sbjct: 398 IYVALAQRKEIR 409
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 10/187 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S + ++ NLDP + + L + F G +++ + D N +GYGFV + +EE
Sbjct: 125 SLRKTGSGNVFIKNLDPSIDNKALHDTFSAFGNILSCKIALDESGN-SKGYGFVHYETEE 183
Query: 78 DADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYD 130
AD AIK +N + L K + V K + K A N+++ NLD V ++ +
Sbjct: 184 AADNAIKHVNGMLLNDKKVYVGRHVPKKERQAKIEQFRAKFTNVYVKNLDESVKDEEFNE 243
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
+ FG I + +++ D G S+GFGF+++++ E + A++A+N + + V+ A
Sbjct: 244 MLAKFGPITS--ALVQTDDEGKSKGFGFVNFENHEDAQKAVDALNETEHKGKILYVARAQ 301
Query: 191 KKDTKGE 197
KK + E
Sbjct: 302 KKTEREE 308
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 5/178 (2%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA +N A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S +
Sbjct: 51 SAHQNS-ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSD 109
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFG 136
D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG
Sbjct: 110 DGEKALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFG 169
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+A+NG L +++ V + KKD
Sbjct: 170 NILS-CKVAQD-ENGNSKGYGFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHIPKKD 225
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 148 FIKNLDGAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETAEAANNAIKAVN 206
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D +V + + F +G
Sbjct: 207 GMLLNEKKVFVGHHIPKKDRMSKFEEMKANF---TNVYVKNIDLEVTDDEFRELFEKYGQ 263
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ + D +TG SRGFGF+++ E++ A++ +N + +++ V A KK + E
Sbjct: 264 I-TSASLAHDNETGKSRGFGFVNFVKHESAAKAVDELNDKDWKGQKLYVGRAQKKHEREE 322
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D +VT++ ELF + G + + + D T +G+GFV F E A A+ LN
Sbjct: 241 YVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGFGFVNFVKHESAAKAVDELN 300
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K+S G NL++ NL DVD++ L D
Sbjct: 301 DKDWKGQKLYVGRAQKKHEREEELRKQYEAARAEKQSKYQGVNLYVKNLHDDVDDEKLRD 360
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 361 MFAPFGTI-TSAKVMRD 376
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 3/173 (1%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G +A + + + YVG+LD VT+ L++ F Q G VV V V +D VT GYG+V F
Sbjct: 26 GGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFT 85
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFS 133
+ +DA AI+ LN I LYGKPIRV + +D GA N+FI NLD +D K L+DTFS
Sbjct: 86 NPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFS 145
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+FG IV+ K+ D +G S+G+GF+ Y + E++ AIE +NG L ++Q+ V
Sbjct: 146 SFGNIVS-CKVAVDS-SGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 196
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + L + F G +V+ V D + +GYGFV++ +EE
Sbjct: 117 SVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEE 175
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTF 132
A AI+ LN + L K + V + +D + N+++ NL + L + F
Sbjct: 176 SAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAF 235
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +M+D + G S+GFGF+++++ + + A+E++NG +++ V A KK
Sbjct: 236 GEYGKI-TSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKK 293
Query: 193 DTK 195
+
Sbjct: 294 SER 296
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q + YV NLDP +++E L E+F G V + V +D +G GFV F +
Sbjct: 309 KEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFAT 367
Query: 76 EEDADYAIKVLNMIKLYGKPIRV 98
E+A A+ L+ + KP+ V
Sbjct: 368 PEEATEAMSQLSGKMIESKPLYV 390
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKPIR+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRRSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 22/198 (11%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQ-AGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+ A+ + Y+ N + +E L E F Q G ++V V D +G+GFV F
Sbjct: 182 EFGAKAREFTNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDE-GGKSKGFGFVSFE 240
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIG 117
EDA A+ +N +L G+ I V +A Q++ S G NL++
Sbjct: 241 RHEDAQKAVDEMNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERMSKYQGVNLYVK 300
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NLD +++++ L+ FS FG I T+ K+M + G SRGFGF+ + S E + A+ MNG+
Sbjct: 301 NLDDNINDERLWKEFSPFGTI-TSAKVMMEE--GRSRGFGFVCFSSPEEATKAVTEMNGR 357
Query: 178 YLCNRQITVSYAYKKDTK 195
+ ++ + V+ A +K+ +
Sbjct: 358 IIGSKPLYVALAQRKEER 375
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 12 NLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+L Q + Q YV NLD + +E LW+ F G + + V + +G+GFV
Sbjct: 282 EMLKQERMSKYQGVNLYVKNLDDNINDERLWKEFSPFGTITSAKVMMEE--GRSRGFGFV 339
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
F S E+A A+ +N + KP+ V A + ++
Sbjct: 340 CFSSPEEATKAVTEMNGRIIGSKPLYVALAQRKEE 374
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD VT+ L++ F Q GPVV+V V +D T GYG+V F + +DA AI+
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN I LYGKPIRV + +D GA N+FI NLD +D K L+DTFS FG IV+ K+
Sbjct: 97 LNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVS-CKV 155
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D +G S+G+GF+ Y + E++ AIE +NG L ++Q+ V
Sbjct: 156 AVDS-SGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 196
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 20/195 (10%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+A + + YV NL T++ L F + G + + V KD +G+GFV F + +
Sbjct: 208 TANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-DGKSKGFGFVNFENAD 266
Query: 78 DADYAIKVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLD 120
DA A++ LN K K R K S+ + L V +NL++ NLD
Sbjct: 267 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 326
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
P + ++ L + FS FG VT+ K+MRDP+ G S+G GF+++ + E + A+ ++G+ +
Sbjct: 327 PSISDEKLKEIFSPFGT-VTSCKVMRDPN-GTSKGSGFVAFSTPEEATEAMSQLSGKMIE 384
Query: 181 NRQITVSYAYKKDTK 195
++ + V+ A +K+ +
Sbjct: 385 SKPLYVAIAQRKEDR 399
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + L + F G +V+ V D + +GYGFV++ +EE
Sbjct: 117 SVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVDS-SGQSKGYGFVQYANEE 175
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTF 132
A AI+ LN + L K + V + +D + N+++ NL + L + F
Sbjct: 176 SAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAF 235
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +M+D D G S+GFGF+++++ + + A+E++NG +++ V A KK
Sbjct: 236 GEYGKI-TSAVVMKDGD-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKK 293
Query: 193 DTK 195
+
Sbjct: 294 SER 296
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+LD +V + L+D FS G +V+ ++ RD T S G+G++++ + + + AI+
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVS-VRVCRDLATRRSLGYGYVNFTNPQDAARAIQ 95
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N L + I V Y+++
Sbjct: 96 ELNYIPLYGKPIRVMYSHR 114
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q + YV NLDP +++E L E+F G V + V +D +G GFV F +
Sbjct: 309 KEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDP-NGTSKGSGFVAFST 367
Query: 76 EEDADYAIKVLNMIKLYGKPIRV 98
E+A A+ L+ + KP+ V
Sbjct: 368 PEEATEAMSQLSGKMIESKPLYV 390
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 3/173 (1%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G +A + + + YVG+LD VT+ L++ F Q G VV V V +D VT GYG+V F
Sbjct: 10 GGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFT 69
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFS 133
+ +DA AI+ LN I LYGKPIRV + +D GA N+FI NLD +D K L+DTFS
Sbjct: 70 NPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFS 129
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+FG IV+ K+ D +G S+G+GF+ Y + E++ AIE +NG L ++Q+ V
Sbjct: 130 SFGNIVS-CKVAVDS-SGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 180
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + L + F G +V+ V D + +GYGFV++ +EE
Sbjct: 101 SVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEE 159
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTF 132
A AI+ LN + L K + V + +D + N+++ NL + L + F
Sbjct: 160 SAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAF 219
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +M+D + G S+GFGF+++++ + + A+E++NG +++ V A KK
Sbjct: 220 GEYGKI-TSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKK 277
Query: 193 DTK 195
+
Sbjct: 278 SER 280
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q + YV NLDP +++E L E+F G V + V +D +G GFV F +
Sbjct: 293 KEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFAT 351
Query: 76 EEDADYAIKVLNMIKLYGKPIRV 98
E+A A+ L+ + KP+ V
Sbjct: 352 PEEATEAMSQLSGKMIESKPLYV 374
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 111/172 (64%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+LD +T+ L++LF+QAG V++V V +D T GYG+V + + +DA A+
Sbjct: 18 ASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 77
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN L GKPIR+ + +D G AN+FI NLD +D K L+DTFSAFG I++ K
Sbjct: 78 LLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILS-CK 136
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I DP +G S+G+GF+ +D+ E++ AI+ +NG + ++Q+ V +K +
Sbjct: 137 IATDP-SGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQER 187
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TEE L +F + G + +V V +D + +GFV F + +DA A++
Sbjct: 198 NVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDG-DGKSKCFGFVNFENADDAAEAVEA 256
Query: 86 LNMIKLYGKPIRVNKASQD-KKSLDV----------------GANLFIGNLDPDVDEKLL 128
LN K K V KA + ++ L++ G NL+I NLD + + L
Sbjct: 257 LNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKL 316
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG I T+ K+MRDP +G SRG GF+++ + E + A+ MNG+ + ++ + V+
Sbjct: 317 KELFSEFGTI-TSCKVMRDP-SGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVAL 374
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 375 AQRKEERRAR 384
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ ++ Q Y+ NLD + ++ L ELF + G + + V +D + + +G GFV F +
Sbjct: 291 KEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDP-SGISRGSGFVAFST 349
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 350 SEEASRALTEMNGKMVVSKPLYVALAQRKEE 380
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 111/172 (64%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+LD +T+ L++LF+QAG V++V V +D T GYG+V + + +DA A+
Sbjct: 18 ASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 77
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN L GKPIR+ + +D G AN+FI NLD +D K L+DTFSAFG I++ K
Sbjct: 78 LLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILS-CK 136
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I DP +G S+G+GF+ +D+ E++ AI+ +NG + ++Q+ V +K +
Sbjct: 137 IATDP-SGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQER 187
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL TEE L +F + G + +V V +D + +GFV F + +DA A++ L
Sbjct: 199 VYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDG-DGKSKCFGFVNFENADDAAEAVEAL 257
Query: 87 NMIKLYGKPIRVNKASQD-KKSLDV----------------GANLFIGNLDPDVDEKLLY 129
N K K V KA + ++ L++ G NL+I NLD + + L
Sbjct: 258 NGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDDSIGDDKLK 317
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS FG I T+ K+MRDP +G SRG GF+++ + E + A+ MNG+ + ++ + V+ A
Sbjct: 318 ELFSEFGTI-TSCKVMRDP-SGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALA 375
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 376 QRKEERRAR 384
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ ++ Q Y+ NLD + ++ L ELF + G + + V +D + + +G GFV F +
Sbjct: 291 KEVVDKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDP-SGISRGSGFVAFST 349
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 350 SEEASRALTEMNGKMVVSKPLYVALAQRKEE 380
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S +D + A++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKALE 123
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 124 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 182
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V Y KKD
Sbjct: 183 VAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD 232
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 155 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIKHVN 213
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N++ +V E+ + F+ +G VT
Sbjct: 214 GMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNINHEVTEEEFRELFAKYGE-VT 272
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + ++ A+E +NG+ +++ V A KK + E R
Sbjct: 273 SSSLARD-NEGKSRGFGFVNFTTHASAAKAVEELNGKEFRGQELYVGRAQKKHEREEELR 331
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 332 KSYEAARLEKAN 343
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 97/227 (42%), Gaps = 61/227 (26%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ +VTEE ELF + G V + + +D +G+GFV F + A A++ LN
Sbjct: 248 YVKNINHEVTEEEFRELFAKYGEVTSSSLARDN-EGKSRGFGFVNFTTHASAAKAVEELN 306
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+ G+ + V +A + +KS + G NL+I NL DVD+ L
Sbjct: 307 GKEFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDVDDDKLRQ 366
Query: 131 TFSAFGVIVTNPKIMRDP------------------------------------------ 148
FS FG I T+ K+MRD
Sbjct: 367 MFSEFGPI-TSAKVMRDAPPEPPAGSEGDKEGKDKENKKESEKEGEGEAAEKKTEKKVER 425
Query: 149 DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 426 KLGKSKGFGFVCFSNPDDATKAVAEMNQRMVDGKPLYVALAQRKDVR 472
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +DR T GY V F+ EDA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQLEDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDRSIDSKTLYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ E ++ AIE MNG +L +R++ V + ++D + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAE 182
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 102/172 (59%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D N +GYGFV F ++E+A+ AI+ +N
Sbjct: 102 FVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEEAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ + ++GA N++I NL D+D++ L D FS FG ++
Sbjct: 160 GMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDLFSRFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKK 269
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 31/195 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NL + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNLGEDMDDERLQDLFSRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMN 252
Query: 88 MIKLYGKPIRVNKAS---------------------------QDKKSLDVGANLFIGNLD 120
L GK I V +A QD+ G NL++ NLD
Sbjct: 253 GKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVKNLD 312
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D++ L FS FG I + M + G S+GFGF+ + S E + A+ MNG+ +
Sbjct: 313 DGIDDERLRKEFSPFGTITSAKVTM---EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVA 369
Query: 181 NRQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 370 TKPLYVALAQRKEER 384
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 108/175 (61%), Gaps = 4/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 68 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSVADGEKALE 127
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 128 ELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILS-CK 186
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGE 197
+ D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V Y KKD + +
Sbjct: 187 VATD-ENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSK 240
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V D N +GYGFV + ++E A AIK +N
Sbjct: 159 FIKNLDAAIDNKALHDTFAAFGNILSCKVATDENGN-SKGYGFVHYETDEAAAQAIKHVN 217
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN ++I N++ +V E+ + FS +G I T
Sbjct: 218 GMLLNEKKVYVGYHIPKKDRQSKFEEMKANYTNVYIKNINLEVTEEEFREFFSKWGEI-T 276
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G RGFGF++Y + ++ +E MNG+ +++ V A KK + E R
Sbjct: 277 SSTLARDAE-GKPRGFGFVNYSTHASAAKCVEEMNGKEWRGQELYVGRAQKKHEREEELR 335
Query: 199 HGTPAERILAAN 210
A R+ N
Sbjct: 336 KSYEAARLEKQN 347
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 60/228 (26%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Y+ N++ +VTEE E F + G + + + +D +G+GFV + + A ++
Sbjct: 250 NVYIKNINLEVTEEEFREFFSKWGEITSSTLARD-AEGKPRGFGFVNYSTHASAAKCVEE 308
Query: 86 LNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLL 128
+N + G+ + V +A + +KS + G NL+I NL +VD++ L
Sbjct: 309 MNGKEWRGQELYVGRAQKKHEREEELRKSYEAARLEKQNKYQGVNLYIKNLSDEVDDEKL 368
Query: 129 YDTFSAFGVIVTNPKIMRDP---------------------------------------- 148
F+ FG I T+ K+MRD
Sbjct: 369 RAMFAEFGPI-TSAKVMRDTPPEPAKDEKNKENNKESEKEGEKKEGEGEGDKKPEVKKPE 427
Query: 149 -DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +K+ +
Sbjct: 428 RKLGKSKGFGFVCFANPDDATKAVAEMNQRMVDGKPLYVALAQRKEVR 475
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 123
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 124 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 182
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V Y KKD
Sbjct: 183 VAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD 232
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 155 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIKHVN 213
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N++ +V E+ + FS +G VT
Sbjct: 214 GMLLNEKKVYVGYHIPKKDRQSKFEEMKANYTNVYVKNINLEVTEEEFRELFSKYGE-VT 272
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + +++ A+E +NG+ +++ V A KK + E R
Sbjct: 273 SSTLARDQE-GKSRGFGFVNFSTHDSAAKAVEELNGKEFRGQELYVGRAQKKHEREEELR 331
Query: 199 HGTPAERILAAN 210
A R AN
Sbjct: 332 KSYEAARAEKAN 343
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 71/237 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ +VTEE ELF + G V + + +D+ +G+GFV F + + A A++ LN
Sbjct: 248 YVKNINLEVTEEEFRELFSKYGEVTSSTLARDQ-EGKSRGFGFVNFSTHDSAAKAVEELN 306
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+ G+ + V +A + +KS + G NL+I NL D+D+ L
Sbjct: 307 GKEFRGQELYVGRAQKKHEREEELRKSYEAARAEKANKYQGVNLYIKNLADDIDDDKLRQ 366
Query: 131 TFSAFGVIVTNPKIMRD--PD--------------------------------------- 149
FS FG I T+ K+MRD PD
Sbjct: 367 MFSEFGPI-TSAKVMRDNPPDHHHSADKEGKDKENKKEGEQEAKKEGKEEGEKDGEAKEG 425
Query: 150 -----------TGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 426 EKKTEKKPERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVEGKPLYVALAQRKDVR 482
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFS-AFGVIV 139
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F A V
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGPALSV-- 217
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 218 ---KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 24/185 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLF---GPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 249
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 250 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 309
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 310 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 366
Query: 191 KKDTK 195
+K+ +
Sbjct: 367 RKEER 371
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFS-AFGVIV 139
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F A V
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGPALSV-- 217
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 218 ---KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 24/185 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLF---GPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 249
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 250 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 309
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 310 EFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 366
Query: 191 KKDTK 195
+K+ +
Sbjct: 367 RKEER 371
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFS-AFGVIV 139
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F A V
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGPALSV-- 217
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 218 ---KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 24/185 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLF---GPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 249
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 250 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 309
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 310 EFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 366
Query: 191 KKDTK 195
+K+ +
Sbjct: 367 RKEER 371
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +DR+T GY V F+ EDA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDRSIDSKTLYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ E ++ AIE MNG +L + ++ V + ++D + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAE 182
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D N +GYGFV F ++E+A+ AI+ +N
Sbjct: 102 FVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEEAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + V + S+ + ++GA N++I NL D+D++ L D F FG ++
Sbjct: 160 GMFLNDHKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDLFGRFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A+E MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKK 269
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NL + +E L +LF + GP ++V V D + +G+GFV F EDA A++ +N
Sbjct: 194 YIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVEEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLD----------VGANLFIGNLD 120
L GK I V +A QDK ++ G NL++ NLD
Sbjct: 253 GKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKNLD 312
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D++ L FS FG I + M + G S+GFGF+ + S E + A+ MNG+ +
Sbjct: 313 DGIDDERLRKEFSPFGTITSAKVTM---EGGRSKGFGFVCFSSPEEATKAVTEMNGKIVA 369
Query: 181 NRQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 370 TKPLYVALAQRKEER 384
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|260815191|ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
gi|229287666|gb|EEN58369.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
Length = 620
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 111/165 (67%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+LDP +TE +L+E F AGPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 12 ASLYVGDLDPDITEAMLYEKFSPAGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 71
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 72 TMNFDTIKGKPMRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKAIYDTFSAFGNILS- 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D +TG+S+GFGF+ +++ EA+D A+ +NG L +++ V
Sbjct: 129 CKVAQD-ETGSSKGFGFVHFETQEAADEAMAKVNGMMLNGKKVYV 172
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 97/186 (52%), Gaps = 22/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N + ++ L + F + G VV+ V D + + +G+GFV + + A A + +N
Sbjct: 196 YVKNFGDKWDDDKLRDFFEKYGKVVSAKVMTDDMGH-SRGFGFVSYEEPDSAGKACEEMN 254
Query: 88 MIKLY-GKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
+++ G+ I V +A Q++ G NL++ NLD +DE++L
Sbjct: 255 DMEVDDGRRIYVGRAQKKAERQAELKAKFEKIKQERIQRYQGVNLYVKNLDSTIDEEILR 314
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + ++ + V+ A
Sbjct: 315 KEFSQFGTI-TSSKVM--TENGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALA 371
Query: 190 YKKDTK 195
+K+ +
Sbjct: 372 QRKEDR 377
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q +R Q YV NLD + EE+L + F Q G + + V + +G+GFV F
Sbjct: 286 IKQERIQRYQGVNLYVKNLDSTIDEEILRKEFSQFGTITSSKVMTE--NGRSKGFGFVCF 343
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
S E+A A+ +N + KP+ V A +D+K+
Sbjct: 344 SSPEEATKAVTEMNGRIVVSKPLYVALAQRKEDRKA 379
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +DR+T GY V F+ EDA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDRSIDSKTLYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ E ++ AIE MNG +L + ++ V + ++D + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAE 182
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D N +GYGFV F ++E+A+ AI+ +N
Sbjct: 102 FVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEEAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + V + S+ + ++GA N++I NL D+D++ L D F FG ++
Sbjct: 160 GMFLNDHKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDLFGRFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A+E MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKK 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 31/195 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NL + +E L +LF + GP ++V V D + +G+GFV F EDA A++ +N
Sbjct: 194 YIKNLGEDMDDERLQDLFGRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVEEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLD----------VGANLFIGNLD 120
L GK I V +A QDK ++ G NL++ NLD
Sbjct: 253 GKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKNLD 312
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D++ L FS FG I + M + G S+GFGF+ + S E + A+ MNG+ +
Sbjct: 313 DGIDDERLRKEFSPFGTITSAKVTM---EGGRSKGFGFVCFSSPEEATKAVTEMNGKIVA 369
Query: 181 NRQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 370 TKPLYVALAQRKEER 384
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF + G ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGAALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD ++++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGINDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP ++V V D +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-GGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D + G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 109/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S D + A++
Sbjct: 53 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALE 112
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 113 ELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILS-CK 171
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D ++G SRG+GF+ Y++ EA++AAI+++NG L +++ V + KKD
Sbjct: 172 VAQD-ESGGSRGYGFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKKD 221
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + +GYGFV + + E A+ AIK +N
Sbjct: 144 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-SGGSRGYGFVHYETAEAANAAIKSVN 202
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D + + + F +G
Sbjct: 203 GMLLNEKKVFVGHHIPKKDRMSKFEEMKANF---TNIYVKNIDTETTDDEFRELFEKYGE 259
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ + RD + G RGFGF++Y E ++ A++ +N ++++ V A KK + E
Sbjct: 260 I-TSASLARDQE-GKVRGFGFVNYIRHEDANKAVDELNDIDFKSQKLYVGRAQKKHEREE 317
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D + T++ ELF + G + + + +D+ + +G+GFV + EDA+ A+ LN
Sbjct: 237 YVKNIDTETTDDEFRELFEKYGEITSASLARDQEGKV-RGFGFVNYIRHEDANKAVDELN 295
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
I + + V +A Q+K + +G NL++ NL D+D++ L
Sbjct: 296 DIDFKSQKLYVGRAQKKHEREEELRRQYEAQRQEKSAKYMGVNLYVKNLADDIDDEELRK 355
Query: 131 TFSAFGVIVTNPKIMRD 147
F A+G I T+ K+MRD
Sbjct: 356 VFEAYGSI-TSAKVMRD 371
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 109/167 (65%), Gaps = 4/167 (2%)
Query: 22 NQDATA-YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
NQ T+ YVG+LD VT+ L++LF Q G VV+V V +D + GYG+V + + +DA
Sbjct: 23 NQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAA 82
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
A++VLN L+GKPIR+ +++D G N+FI NLD +D K L+DTFSAFG I+
Sbjct: 83 RALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNIL 142
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ K+ D +G S+G+GF+ YDS EA+ AIE +NG L ++Q+ V
Sbjct: 143 S-CKVAVDS-SGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYV 187
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 106/198 (53%), Gaps = 20/198 (10%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+ ++ + +V NL EE L ++F + G + +V V KD + +GFV F + E
Sbjct: 199 AVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDE-DGKSRCFGFVNFENAE 257
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLD 120
DA A++ LN KL K V +A + K+++D G NL+I NLD
Sbjct: 258 DAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNLD 317
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+ ++ L + FS +G I T+ K+MRDP +G S+G GF+++ + E + A+ MNG+ +
Sbjct: 318 DSISDEKLKELFSPYGTI-TSCKVMRDP-SGVSKGSGFVAFSNPEEASRALSEMNGKMVV 375
Query: 181 NRQITVSYAYKKDTKGER 198
++ + V+ A +K+ + R
Sbjct: 376 SKPLYVALAQRKEERRAR 393
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+ R+ + ++ NLD + + L + F G +++ V D + +GYGFV++ SEE
Sbjct: 108 TIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDS-SGQSKGYGFVQYDSEE 166
Query: 78 DADYAIKVLNMIKLYGKPIRVN---KASQDKKSLDVG--ANLFIGNLDPDVDEKLLYDTF 132
A AI+ LN + L K + V + + ++D N+F+ NL E+ L F
Sbjct: 167 AAQKAIEKLNGMLLNDKQVYVGPFVRKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIF 226
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ +M+D D G SR FGF+++++ E + A+EA+NG L N+ V A KK
Sbjct: 227 GEFGAI-TSVAVMKDED-GKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKK 284
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
ER R + + KS+ L+
Sbjct: 285 S---EREMELKHRFEQSAKEAVDKSQGLNLY 312
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+L++G+LD +V + LYD F+ G +V+ ++ RD + S G+G+++Y + + + A+
Sbjct: 27 TSLYVGDLDVNVTDSQLYDLFNQLGQVVS-VRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
E +N L + I + Y+ +D R G I + K+ T A G
Sbjct: 86 EVLNFTPLHGKPIRIMYS-NRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFG 139
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + +++Q Y+ NLD +++E L ELF G + + V +D + + +G GFV F +
Sbjct: 300 KEAVDKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDP-SGVSKGSGFVAFSN 358
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 359 PEEASRALSEMNGKMVVSKPLYVALAQRKEE 389
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPLRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 103/179 (57%), Gaps = 14/179 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++M D ++G S+GFGF+S++ E + A++ MNG+ L RQ+ V A K KGER
Sbjct: 220 -IRVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQK---KGERQ 273
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP +++ V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDEKLKELFSKYGPALSIRVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|401886540|gb|EJT50568.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 686
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 57 ASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 116
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 117 HLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFGNILS-CK 175
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + GNSRGF F+ Y++ EA+DAAI+++NG L ++++ V + K +
Sbjct: 176 VATD-ENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYVGHHISKKER 226
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 102/195 (52%), Gaps = 24/195 (12%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEE 77
+R + ++ NL+P+ T++ L ++F G +V+ + V +D L +G+ FV + + +
Sbjct: 233 QRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGED---GLSKGFAFVNYTTHD 289
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLD 120
A A+ LN ++ GK + V +A + + +S G NL++ N+D
Sbjct: 290 AAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNID 349
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+ D+ L F F +T+ K+MRD D G SRGFGF+ + + + A++ MNG+ +
Sbjct: 350 DEWDDDRLRSEFD-FAGTITSAKVMRD-DKGASRGFGFVCFSQPDEATRAVQEMNGKMIG 407
Query: 181 NRQITVSYAYKKDTK 195
+ + VS A KK+ +
Sbjct: 408 TKPLYVSLAQKKEVR 422
>gi|406698471|gb|EKD01707.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 57 ASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 116
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 117 HLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFGNILS-CK 175
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + GNSRGF F+ Y++ EA+DAAI+++NG L ++++ V + K +
Sbjct: 176 VATD-ENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYVGHHISKKER 226
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 102/195 (52%), Gaps = 24/195 (12%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEE 77
+R + ++ NL+P+ T++ L ++F G +V+ + V +D L +G+ FV + + +
Sbjct: 233 QRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGED---GLSKGFAFVNYTTHD 289
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLD 120
A A+ LN ++ GK + V +A + + +S G NL++ N+D
Sbjct: 290 AAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNID 349
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+ D+ L F F +T+ K+MRD D G SRGFGF+ + + + A++ MNG+ +
Sbjct: 350 DEWDDDRLRSEFD-FAGTITSAKVMRD-DKGASRGFGFVCFSQPDEATRAVQEMNGKMIG 407
Query: 181 NRQITVSYAYKKDTK 195
+ + VS A KK+ +
Sbjct: 408 TKPLYVSLAQKKEVR 422
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+P+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++M D D+G S+GFGF+S++ E + A++ MNG+ + +Q+ V A K KGER
Sbjct: 220 -IRVMTD-DSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQK---KGERQ 273
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L E+F + GP +++ V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQRAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ GK + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A K+
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKR 269
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 109/167 (65%), Gaps = 4/167 (2%)
Query: 22 NQDATA-YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
NQ T+ YVG+LD VT+ L++LF Q G VV+V V +D + GYG+V + + +DA
Sbjct: 23 NQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAA 82
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
A++VLN L+GKPIR+ +++D G N+FI NLD +D K L+DTFSAFG I+
Sbjct: 83 RALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNIL 142
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ K+ D +G S+G+GF+ YDS EA+ AIE +NG L ++Q+ V
Sbjct: 143 S-CKVAVDS-SGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYV 187
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 20/198 (10%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+ ++ + +V NL EE L ++F + G + +V V KD + +GFV F + E
Sbjct: 199 AVDKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDE-DGKSRCFGFVNFENAE 257
Query: 78 DADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGNLD 120
DA A++ LN KL K V +A + ++ +++ G NL++ NLD
Sbjct: 258 DAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLKNLD 317
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+ + L + FS +G I T+ K+MRDP +G S+G GF+++ + E + A+ MNG+ +
Sbjct: 318 DSISDDKLKELFSPYGTI-TSCKVMRDP-SGVSKGSGFVAFSTPEEASRALSEMNGKMVV 375
Query: 181 NRQITVSYAYKKDTKGER 198
++ + V+ A +K+ + R
Sbjct: 376 SKPLYVALAQRKEERRAR 393
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+ R+ + ++ NLD + + L + F G +++ V D + +GYGFV++ S+E
Sbjct: 108 TIRRSGNGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDS-SGQSKGYGFVQYDSDE 166
Query: 78 DADYAIKVLNMIKLYGKPIRVN---KASQDKKSLDVG--ANLFIGNLDPDVDEKLLYDTF 132
A AI+ LN + L K + V + + ++D N+F+ NL E+ L F
Sbjct: 167 AAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMAVDKTRFTNVFVKNLSESTLEEELRKIF 226
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ +M+D D G SR FGF+++++ E + A+EA+NG L N+ V A KK
Sbjct: 227 GEFGTI-TSVAVMKDED-GKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKK 284
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
ER R + + KS+ L+
Sbjct: 285 S---EREMELKHRFEQSAQEAVDKSQGLNLY 312
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q + +++Q Y+ NLD ++++ L ELF G + + V +D + + +G GFV F +
Sbjct: 300 QEAVDKSQGLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDP-SGVSKGSGFVAFST 358
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 359 PEEASRALSEMNGKMVVSKPLYVALAQRKEE 389
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPLRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++M D D G S+GFGF+S++ E + A++ MNG+ L RQ+ V A K KGER
Sbjct: 220 -IRVMTD-DGGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK---KGERQ 273
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP +++ V D +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDEKLKELFSKYGPALSIRVMTDD-GGKSKGFGFVSFERHEDAQKAVDDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + SQ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPLRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFGNYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++M D DTG S+GFGF+S++ E + A++ MNG+ L RQ+ V A K KGER
Sbjct: 220 -VRVMTD-DTGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK---KGERQ 273
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF GP ++V V D T +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDEKLKELFGNYGPALSVRVMTDD-TGKSKGFGFVSFERHEDAQKAVDDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ + +D++T GY +V ++ D++ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDIKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N +YGKPIR+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILS-CK 136
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D ++ NS+G+GF+ +++ E++ AIE +NG L +++ V
Sbjct: 137 VANDEES-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYV 178
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 119/230 (51%), Gaps = 28/230 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N ++ +E L +LF + G + + V D +G+GFV F + EDA+ A+ ++
Sbjct: 202 YIKNFADELDKEALEKLFSKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVTEMH 260
Query: 88 MIKLYG--KPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
+L G + + V +A ++++S ++ G NL++ NLD V++ +L
Sbjct: 261 EYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDIL 320
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F A+G I T+ K+M D D G S+GFGF+ ++ + + A+ MNG+ +C + + V+
Sbjct: 321 KQNFEAYGKI-TSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 189 AYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG------PPSLQN 232
A +K+ + + + + LA+ + S P T++ G +LQN
Sbjct: 379 AQRKEDRKAQLASQYMQRLASIRMHNAGSMPGTVYTPGTGGFFVSSTLQN 428
>gi|452001105|gb|EMD93565.1| hypothetical protein COCHEDRAFT_1096208 [Cochliobolus
heterostrophus C5]
Length = 749
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S ED
Sbjct: 42 AHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSED 101
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG
Sbjct: 102 GEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGN 161
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L +++ V +
Sbjct: 162 ILS-CKVAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGH 210
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + N +GYGFV + + E A+ AIK +N
Sbjct: 139 FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKHVN 197
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D DV ++ + F G
Sbjct: 198 GMLLNEKKVFVGHHIPKKERMSKFEEMKANF---TNIYVKNIDLDVSDEEFRELFEKHGD 254
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ I RD + G SRGFGF++Y EA+ AA++A+N +++ V A KK + E
Sbjct: 255 I-TSASIARD-EQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREE 312
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D V++E ELF + G + + + +D +G+GFV + E A A+ LN
Sbjct: 232 YVKNIDLDVSDEEFRELFEKHGDITSASIARDE-QGKSRGFGFVNYIKHEAASAAVDALN 290
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K+S G NL+I NL+ DVD++ L D
Sbjct: 291 DTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRD 350
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 351 MFTPFGTI-TSAKVMRD 366
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N +YGKPIR+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILS-CK 136
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D ++ NS+G+GF+ +++ E++ AIE +NG L +++ V
Sbjct: 137 VANDEES-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYV 178
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 119/230 (51%), Gaps = 28/230 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N ++ +E L +LF + G + + V D +G+GFV F + EDA+ A+ ++
Sbjct: 202 YIKNFADELDKEALEKLFSKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVTEMH 260
Query: 88 MIKLYG--KPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
+L G + + V +A ++++S ++ G NL++ NLD V++ +L
Sbjct: 261 EYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDIL 320
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F A+G I T+ K+M D D G S+GFGF+ ++ + + A+ MNG+ +C + + V+
Sbjct: 321 KQNFEAYGKI-TSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 189 AYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG------PPSLQN 232
A +K+ + + + + LA+ + S P T++ G +LQN
Sbjct: 379 AQRKEDRKAQLASQYMQRLASIRMHNAGSMPGTVYTPGTGGFFVSSTLQN 428
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 10/180 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L+E F QAG VV+V V +D T GYG+V + + +DA A+
Sbjct: 45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 104
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN + L G+ IRV + +D +KS VG N+FI NLD +D K L++TFSAFG I++
Sbjct: 105 ELNFMALNGRAIRVMYSVRDPSLRKS-GVG-NIFIKNLDKSIDHKALHETFSAFGPILS- 161
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER 198
K+ DP +G S+G+GF+ YD+ EA+ AI+ +NG L ++Q+ V + ++D GE+
Sbjct: 162 CKVAVDP-SGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEK 220
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S E+ + YV NL +++E L ++F + G + + +D +G+GFV F + +
Sbjct: 217 SGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDG-EGKSKGFGFVNFENSD 275
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLD 120
DA A+ LN K V KA + K++ D G+NL++ NLD
Sbjct: 276 DAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLD 335
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
V + L + F+ FG I T+ K+MRDP +G SRG GF+++ + E + AI MNG+ +
Sbjct: 336 ESVTDDKLREHFAPFGTI-TSCKVMRDP-SGVSRGSGFVAFSTPEEATRAITEMNGKMIV 393
Query: 181 NRQITVSYAYKKDTKGER 198
+ + V+ A +K+ + R
Sbjct: 394 TKPLYVALAQRKEDRKAR 411
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A+++Q + YV NLD VT++ L E F G + + V +D + + +G GFV F +
Sbjct: 318 KEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-SGVSRGSGFVAFST 376
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A AI +N + KP+ V A +D+K+
Sbjct: 377 PEEATRAITEMNGKMIVTKPLYVALAQRKEDRKA 410
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S ED
Sbjct: 42 AHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSED 101
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG
Sbjct: 102 GEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGN 161
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L +++ V +
Sbjct: 162 ILS-CKVAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGH 210
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + N +GYGFV + + E A+ AIK +N
Sbjct: 139 FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKHVN 197
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D DV ++ + F G
Sbjct: 198 GMLLNEKKVFVGHHIPKKERMSKFEEMKANF---TNIYVKNIDLDVSDEEFRELFEKHGD 254
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ I RD + G SRGFGF++Y EA+ AA++A+N +++ V A KK + E
Sbjct: 255 I-TSASIARD-EQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREE 312
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D V++E ELF + G + + + +D +G+GFV + E A A+ LN
Sbjct: 232 YVKNIDLDVSDEEFRELFEKHGDITSASIARDE-QGKSRGFGFVNYIKHEAASAAVDALN 290
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K+S G NL+I NL+ DVD++ L D
Sbjct: 291 DTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRD 350
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 351 MFTPFGTI-TSAKVMRD 366
>gi|189190886|ref|XP_001931782.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973388|gb|EDU40887.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 704
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S ED
Sbjct: 42 AHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSED 101
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG
Sbjct: 102 GEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGN 161
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L +++ V +
Sbjct: 162 ILS-CKVAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGH 210
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + N +GYGFV + + E A+ AIK +N
Sbjct: 139 FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKHVN 197
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D DV ++ D F G
Sbjct: 198 GMLLNEKKVFVGHHIPKKERMSKFEEMKANF---TNIYVKNIDLDVSDEDFRDLFEKHGD 254
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ I RD D G SRGFGF++Y EA+ AA++A+N +++ V A KK + E
Sbjct: 255 I-TSASIARD-DQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREE 312
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 69/235 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D V++E +LF + G + + + +D +G+GFV + E A A+ LN
Sbjct: 232 YVKNIDLDVSDEDFRDLFEKHGDITSASIARDD-QGKSRGFGFVNYIKHEAASAAVDALN 290
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K+S G NL+I NL+ DVD++ L D
Sbjct: 291 DTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRD 350
Query: 131 TFSAFGVIVTNPKIMRD--PDTGN------------------------------------ 152
F+ FG I T+ K+MRD P G+
Sbjct: 351 MFTPFGTI-TSAKVMRDAMPAAGSEDATDEKKDESKEESEEAKDESKEDSDDKKDEKADK 409
Query: 153 ------------SRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
S+GFGF+ + + + + A+ MN + + N+ + V+ A +KD +
Sbjct: 410 VTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIENKPLYVALAQRKDVR 464
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V F + D + A++
Sbjct: 39 ASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERALE 98
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G+ N+FI NLD +D K L+DTFSAFG I++ K
Sbjct: 99 SLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDTSIDNKALHDTFSAFGNILS-CK 157
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
I D ++GNS+G+GF+ Y++ EA+D AI+ ++G L ++++ V
Sbjct: 158 IALD-ESGNSKGYGFVHYETEEAADNAIKHVDGMLLNDKKVYV 199
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R + YV NLD + +E E+F + GP+ + V D +G+GF+ F + EDA
Sbjct: 216 RAKFTNVYVKNLDESINDEQFKEMFSKFGPITSALVQTDE-EGKSKGFGFINFENYEDAH 274
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ LN + GK + V +A + +K + G NL+I NLD D+
Sbjct: 275 KAVDTLNETEHNGKTLYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDI 334
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L FS +GVI T+ K+M D + G S+GFGF+ + S + + A+ MNG+ + ++
Sbjct: 335 DDEKLRQEFSVYGVI-TSAKVMCD-EKGTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKP 392
Query: 184 ITVSYAYKKDTK 195
I V+ A +K+ +
Sbjct: 393 IYVALAQRKEVR 404
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S + ++ NLD + + L + F G +++ + D N +GYGFV + +EE
Sbjct: 120 SLRKTGSGNVFIKNLDTSIDNKALHDTFSAFGNILSCKIALDESGN-SKGYGFVHYETEE 178
Query: 78 DADYAIK-----VLNMIKLY-GKPI-RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
AD AIK +LN K+Y G+ I R + ++ ++ N+++ NLD ++++ +
Sbjct: 179 AADNAIKHVDGMLLNDKKVYVGRHIPRKERQAKIEQIRAKFTNVYVKNLDESINDEQFKE 238
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I + +++ + G S+GFGFI+++++E + A++ +N + + V+ A
Sbjct: 239 MFSKFGPITS--ALVQTDEEGKSKGFGFINFENYEDAHKAVDTLNETEHNGKTLYVARAQ 296
Query: 191 KKDTKGE 197
KK + E
Sbjct: 297 KKTEREE 303
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AIK +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIKKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ELF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M DP +G S+GFGF+S++ E ++ A+E MNG+ + + + V A KK
Sbjct: 220 -VKVMTDP-SGKSKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKK 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D + +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Query: 6 APGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH 65
P GA+ A ++ + YVG+LD VT+ L++LF Q G VV+V V +D +
Sbjct: 10 VPNSGADPAANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRS 69
Query: 66 QGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVD 124
GYG+V + + DA A+ VLN L G PIRV + +D G+ N+FI NLD +D
Sbjct: 70 LGYGYVNYSNPVDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAID 129
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
K L+DTFSAFG I++ K+ D +G S+GFGF+ +D+ EA+ AIE +NG L ++Q+
Sbjct: 130 HKALHDTFSAFGSILS-CKVATDS-SGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQV 187
Query: 185 TVS-YAYKKDTKGERHGTPAERILAAN 210
V + K++ + T + N
Sbjct: 188 FVGPFLRKQERESVSEKTKFNNVFVKN 214
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 22/198 (11%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+E+ + +V NL +EE L +F + GP+ +V V +D + +GFV F + +D
Sbjct: 202 SEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDG-EGKSKCFGFVNFENADD 260
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNLD 120
A +++ LN K+ GK V KA Q K +V GANL++ NLD
Sbjct: 261 AARSVEALNGKKVDGKEWYVGKA-QKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLD 319
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D+ L + F+ FG I T+ K+MRDP+ G SRG GF+++ S E + A+ MNG+ +
Sbjct: 320 DSIDDDKLKELFTGFGTI-TSCKVMRDPN-GISRGSGFVAFSSPEEAARALAEMNGRMIV 377
Query: 181 NRQITVSYAYKKDTKGER 198
++ + V+ A +K+ + R
Sbjct: 378 SKPLYVALAQRKEDRIAR 395
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q A YV NLD + ++ L ELF G + + V +D + +G GFV F S
Sbjct: 302 KEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDP-NGISRGSGFVAFSS 360
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
E+A A+ +N + KP+ V A + + +
Sbjct: 361 PEEAARALAEMNGRMIVSKPLYVALAQRKEDRI 393
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Query: 6 APGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH 65
P GA+ A ++ + YVG+LD VT+ L++LF Q G VV+V V +D +
Sbjct: 10 VPNSGADPAANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRS 69
Query: 66 QGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVD 124
GYG+V + + DA A+ VLN L G PIRV + +D G+ N+FI NLD +D
Sbjct: 70 LGYGYVNYSNPVDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAID 129
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
K L+DTFSAFG I++ K+ D +G S+GFGF+ +D+ EA+ AIE +NG L ++Q+
Sbjct: 130 HKALHDTFSAFGSILS-CKVATDS-SGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQV 187
Query: 185 TVS-YAYKKDTKGERHGTPAERILAAN 210
V + K++ + T + N
Sbjct: 188 FVGPFLRKQERESVSEKTKFNNVFVKN 214
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 22/198 (11%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
+E+ + +V NL +EE L +F + GP+ +V V +D + +GFV F + +D
Sbjct: 202 SEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDG-EGKSKCFGFVNFENADD 260
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNLD 120
A +++ LN K+ GK V KA Q K +V GANL++ NLD
Sbjct: 261 AARSVEALNGKKVDGKEWYVGKA-QKKSEREVELKSRFEQSVKEAADKYQGANLYVKNLD 319
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D+ L + F+ FG I T+ K+MRDP+ G SRG GF+++ S E + A+ MNG+ +
Sbjct: 320 DSIDDDKLKELFTGFGTI-TSCKVMRDPN-GISRGSGFVAFSSPEEAARALAEMNGRMIV 377
Query: 181 NRQITVSYAYKKDTKGER 198
++ + V+ A +K+ + R
Sbjct: 378 SKPLYVALAQRKEDRRAR 395
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q A YV NLD + ++ L ELF G + + V +D + +G GFV F S
Sbjct: 302 KEAADKYQGANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDP-NGISRGSGFVAFSS 360
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ V A +D+++
Sbjct: 361 PEEAARALAEMNGRMIVSKPLYVALAQRKEDRRA 394
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV++++V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|449281934|gb|EMC88877.1| Embryonic polyadenylate-binding protein [Columba livia]
Length = 646
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 109/182 (59%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPVDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NVFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRG+GF+ +++ EA+ AIE MNG L +R++ V + + + G
Sbjct: 129 KVVC---DENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKEREAEFGA 185
Query: 202 PA 203
A
Sbjct: 186 KA 187
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA---- 82
Y+ N + ++ L E+F + G ++V V D T +G+GFV F E+A A
Sbjct: 193 VYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDS-TGRSKGFGFVNFEKHEEAQKARGSS 251
Query: 83 ------------IKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGAN 113
+ +N ++ G+ + V +A Q++ S G N
Sbjct: 252 CCAQRPPLRWQAVADMNGKEINGRIVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVN 311
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
L++ NLD +D+ L FS +G I T+ K+M + G+S+GFGF+ + S E + A+
Sbjct: 312 LYVKNLDDGIDDDRLRKEFSPYGTI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTE 368
Query: 174 MNGQYLCNRQITVSYAYKKDTK 195
MNG+ + + + V+ A +K+ +
Sbjct: 369 MNGRIVSTKPLYVALAQRKEER 390
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P TE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S ED
Sbjct: 42 AHNQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSED 101
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG
Sbjct: 102 GEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGN 161
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L +++ V +
Sbjct: 162 ILS-CKVAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGH 210
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + N +GYGFV + + E A+ AIK +N
Sbjct: 139 FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKHVN 197
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D DV + D F G
Sbjct: 198 GMLLNEKKVFVGHHIPKKERMSKFEEMKANF---TNIYVKNIDLDVSDDDFRDLFEKHGD 254
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ I RD D G SRGFGF++Y EA+ AA++A+N +++ V A KK + E
Sbjct: 255 I-TSASIARD-DQGKSRGFGFVNYIKHEAASAAVDALNDTDFRGQKLYVGRAQKKHEREE 312
Query: 198 R 198
Sbjct: 313 E 313
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D V+++ +LF + G + + + +D +G+GFV + E A A+ LN
Sbjct: 232 YVKNIDLDVSDDDFRDLFEKHGDITSASIARDD-QGKSRGFGFVNYIKHEAASAAVDALN 290
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K+S G NL+I NL+ DVD++ L D
Sbjct: 291 DTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRD 350
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 351 MFTPFGTI-TSAKVMRD 366
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 60 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 119
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D GA N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 120 ELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILS-CK 178
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 179 VAQD-EHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 228
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 151 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKHVN 209
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N++ +V ++ + F+ FG VT
Sbjct: 210 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGE-VT 268
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + EA+ A++ +NG+ + + V A KK + E R
Sbjct: 269 SSSLARDQE-GKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVGRAQKKHEREEELR 327
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 328 KSYEAARLEKAN 339
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 59/225 (26%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ +VT+E ELF + G V + + +D+ +G+GFV F + E A A+ LN
Sbjct: 244 YVKNINNEVTDEEFRELFAKFGEVTSSSLARDQ-EGKSRGFGFVNFTTHEAAAQAVDELN 302
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +KS + G NL+I NL DVD+ L
Sbjct: 303 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRA 362
Query: 131 TFSAFGVIVTNPKIMRDP----------------------------------------DT 150
FS +G I T+ K+MRD
Sbjct: 363 MFSEYGPI-TSAKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKKGDRKL 421
Query: 151 GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 422 GKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVR 466
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L E+F + GP ++V V D +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDDM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N + GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D D G S+GFGF+S++ E + A++ MNG+ + + I V A KK
Sbjct: 220 -VKVMTD-DNGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKK 269
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 60 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 119
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D GA N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 120 ELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILS-CK 178
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 179 VAQD-EHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 228
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 151 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKHVN 209
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N++ +V ++ + F+ FG VT
Sbjct: 210 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGE-VT 268
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G +RGFGF+++ + EA+ A++ +NG+ + + V A KK + E R
Sbjct: 269 SSSLARDQE-GKTRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVGRAQKKHEREEELR 327
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 328 KSYEAARLEKAN 339
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 58/224 (25%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ +VT+E ELF + G V + + +D+ +G+GFV F + E A A+ LN
Sbjct: 244 YVKNINNEVTDEEFRELFAKFGEVTSSSLARDQ-EGKTRGFGFVNFTTHEAAAQAVDELN 302
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +KS + G NL+I NL DVD+ L
Sbjct: 303 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRA 362
Query: 131 TFSAFGVIVTNPKIMRDP---------------------------------------DTG 151
FS +G I T+ K+MRD G
Sbjct: 363 MFSEYGPI-TSAKVMRDSLIEGSEEKDEKDKENKKEGEAEEEQKEGSEKKTEKKGDRKLG 421
Query: 152 NSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 422 KSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVR 465
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K+LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKVLYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 102/172 (59%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + ++L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F +AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K+LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 11/182 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NLD + ++L++ G +++ V D N +GYGFV F + E
Sbjct: 92 SLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHE 149
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYD 130
A+ AI+ +N L + + V + S+ ++ ++GA N++I N D+D++ L D
Sbjct: 150 AAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKVKEFPNVYIKNFGEDMDDERLKD 209
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A
Sbjct: 210 LFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQ 267
Query: 191 KK 192
KK
Sbjct: 268 KK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD D+D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEDR 374
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 112/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NVFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRG+GF+ +++ EA+ AIE MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHF---KSRKEREAE 182
Query: 202 PAERILAANN 211
R + N
Sbjct: 183 VGARAIEFTN 192
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GYGFV F + E A AI+ +
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGYGFVHFETHEAATRAIETM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ +VGA N++I N D+D+ L + FS FG +
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D + G S+GFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 219 S-VKVMMD-NNGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKR 269
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + ++ L E+F + G ++V V D +G+GFV F E+A A+ +
Sbjct: 193 VYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDN-NGRSKGFGFVNFEKHEEAQKAVADM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ G+ + V +A Q++ + G NL++ NLD +D++ L
Sbjct: 252 NGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERVNRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPYGTI-TSAKVM--TEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 109/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S D + A++
Sbjct: 56 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALE 115
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 116 ELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILS-CK 174
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+++AI+++NG L +++ V + KKD
Sbjct: 175 VAQD-EHGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKKD 224
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 147 FIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETAEAANSAIKSVN 205
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+DP+ + F +G
Sbjct: 206 GMLLNEKKVFVGHHIPKKDRMSKFEEMKANF---TNIYVKNIDPEATDDEFRALFEKYGD 262
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ + D + G SRGFGF++Y E ++ A+E +N + + V A KK + E
Sbjct: 263 I-TSASLAHDQE-GKSRGFGFVNYIRHEDANKAVEELNNSDFKGQALYVGRAQKKHEREE 320
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 78/245 (31%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+DP+ T++ LF + G + + + D+ +G+GFV + EDA+ A++ LN
Sbjct: 240 YVKNIDPEATDDEFRALFEKYGDITSASLAHDQ-EGKSRGFGFVNYIRHEDANKAVEELN 298
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDE----- 125
G+ + V +A Q+K + G NL++ NL ++D+
Sbjct: 299 NSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEIDDDELRK 358
Query: 126 -----------KLLYDTFSAFGVIVTNPK------------------------------- 143
K++ DT A V +
Sbjct: 359 IFEPYGAITSAKVMRDTIPADEVAASKKDEEKSDEEKQSDDEEKKDEGDKNEEGEKKEGD 418
Query: 144 ---IMRDPDT----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
+++ DT G S+GFGF+ + + + + A+ +N + + + + V+ A
Sbjct: 419 VEDVIKKLDTITIGGEKKILGKSKGFGFVCFSNPDEATKAVTELNQKMIHGKPLYVALAQ 478
Query: 191 KKDTK 195
+K+ +
Sbjct: 479 RKEVR 483
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 19 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 78
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N +YGKPIR+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 79 TMNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILS-CK 137
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D ++ NS+G+GF+ +++ E++ AIE +NG L +++ V
Sbjct: 138 VANDEES-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYV 179
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 12/187 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V D +N +GYGFV F +EE
Sbjct: 100 SMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEESN-SKGYGFVHFETEE 158
Query: 78 DADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A AI+ +N + L GK + V K + + ++G N+FI N ++D++ L
Sbjct: 159 SAQKAIEKVNGMLLEGKKVYVGKFQPRAARMREMGETARRFTNVFIKNFADELDKEKLEK 218
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL--CNRQITVSY 188
F+ FG I T+ +M D D G S+GFGF+++++ E ++ A+ M+ L R++ V
Sbjct: 219 LFAKFGKI-TSCAVMSDAD-GKSKGFGFVAFENPEDAEKAVNEMHEYQLPDSERKLYVCR 276
Query: 189 AYKKDTK 195
A KK+ +
Sbjct: 277 AQKKNER 283
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 119/230 (51%), Gaps = 28/230 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ N ++ +E L +LF + G + + V D +G+GFV F + EDA+ A+ ++
Sbjct: 203 FIKNFADELDKEKLEKLFAKFGKITSCAVMSD-ADGKSKGFGFVAFENPEDAEKAVNEMH 261
Query: 88 MIKL--YGKPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
+L + + V +A ++++S ++ G NL++ NLD VD+++L
Sbjct: 262 EYQLPDSERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVDDEVL 321
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F ++G I T+ K+M D D G S+GFGF+ ++ + + A+ MNG+ +C + + V+
Sbjct: 322 RQNFESYGKI-TSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 379
Query: 189 AYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG------PPSLQN 232
A +K+ + + + + LA+ + + P T++ G +LQN
Sbjct: 380 AQRKEDRKAQLASQYMQRLASIRMHNAGAMPGTMYTPGNGGFFVSSALQN 429
>gi|440638008|gb|ELR07927.1| hypothetical protein GMDG_02786 [Geomyces destructans 20631-21]
Length = 805
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 111/181 (61%), Gaps = 4/181 (2%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G +A A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V +
Sbjct: 52 GAQAAHPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYN 111
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFS 133
+ D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+
Sbjct: 112 TTIDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFA 171
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KK 192
AFG I++ K+ +D ++GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KK
Sbjct: 172 AFGNILS-CKVAQD-ESGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKK 229
Query: 193 D 193
D
Sbjct: 230 D 230
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 153 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDESGN-SKGYGFVHYETDEAASQAIKHVN 211
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ D + + F FG VT
Sbjct: 212 GMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPADATDDQFRELFEKFG-DVT 270
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G +RGFGF+++ + E + AA++ +NG+ + + V A KK + E R
Sbjct: 271 SASLARD-EAGKNRGFGFVNFINHEHASAAVDELNGKDFMGQDLYVGRAQKKHEREEELR 329
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 330 KSYEAARIEKAS 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ T++ ELF + G V + + +D ++G+GFV F + E A A+ LN
Sbjct: 246 YVKNIPADATDDQFRELFEKFGDVTSASLARDEAGK-NRGFGFVNFINHEHASAAVDELN 304
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K S G NL++ NL+ DVD++ L +
Sbjct: 305 GKDFMGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLEDDVDDEKLRE 364
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ +G I T+ K+MRD
Sbjct: 365 LFAPYGAI-TSAKVMRD 380
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 111/179 (62%), Gaps = 8/179 (4%)
Query: 22 NQDATA-YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
N AT+ Y G+LDP TE L+ELF GPVV++ V +D +T GY +V F+ DA
Sbjct: 28 NLSATSLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAA 87
Query: 81 YAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
AI LN + GKPIR+ + +D +KS VG N+FI NLD ++D K LYDTF+ FG
Sbjct: 88 RAIDALNFQVVNGKPIRIMYSQRDPALRKS-GVG-NIFIKNLDKEIDNKALYDTFAQFGN 145
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
IV+ K+ D G S+G+GF+ +D+ E + +AIE +NG L ++Q+ V K++ +G
Sbjct: 146 IVS-AKVATDLQ-GQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGPFQKRNERG 202
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 28/204 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL VTEE L E+F + G + +V V KD +G+GFV + EDA+ A K +
Sbjct: 212 YVKNLHESVTEEKLREVFEKFGALTSVVVMKD-AEGKSKGFGFVCY---EDAEAAGKSVE 267
Query: 88 MIKLYGK-------PIRVNKASQDKKSLDV--------------GANLFIGNLDPDVDEK 126
+ Y K R K S+ + L GANL+I NL+ VD+
Sbjct: 268 ELDGYDKIEDKAWVVCRAQKKSEREAELKAKFDAERRERMEKMAGANLYIKNLEDTVDDA 327
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + F+ FG I T+ ++MRD G SRG F+++ S + + A+ MNG+ + + V
Sbjct: 328 KLRELFAEFGTI-TSCRVMRDT-AGASRGSAFVAFSSADEATRAVTEMNGKMAGQKPLYV 385
Query: 187 SYAYKKDTKGER-HGTPAERILAA 209
+ A +K+ + R A+R +AA
Sbjct: 386 ALAQRKEDRRLRLQAQFAQRQVAA 409
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 86/152 (56%), Gaps = 6/152 (3%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD ++ + L++ F Q G +V+ V D + +GYGFV+F +EE A AI+ +N
Sbjct: 123 FIKNLDKEIDNKALYDTFAQFGNIVSAKVATD-LQGQSKGYGFVQFDTEEGAQSAIEKVN 181
Query: 88 MIKLYGKPIRV---NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
+ L K + V K ++ N+++ NL V E+ L + F FG + T+ +
Sbjct: 182 GMLLNDKQVYVGPFQKRNERGGGPTTFNNVYVKNLHESVTEEKLREVFEKFGAL-TSVVV 240
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
M+D + G S+GFGF+ Y+ EA+ ++E ++G
Sbjct: 241 MKDAE-GKSKGFGFVCYEDAEAAGKSVEELDG 271
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 11 ANLLGQHSAERNQD------ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNL 64
A L + AER + A Y+ NL+ V + L ELF + G + + V +D
Sbjct: 293 AELKAKFDAERRERMEKMAGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRD-TAGA 351
Query: 65 HQGYGFVEFRSEEDADYAIKVLN 87
+G FV F S ++A A+ +N
Sbjct: 352 SRGSAFVAFSSADEATRAVTEMN 374
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 113/180 (62%), Gaps = 11/180 (6%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ + +D++T GY +V ++ DA A++
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVG---ANLFIGNLDPDVDEKLLYDTFSAFGVI 138
LN + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I
Sbjct: 71 TLNFDVIKGRPVRIMWSQRDPSLRKS-GVGGGVGNIFIKNLDKSIDNKALYDTFSAFGNI 129
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
++ + D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 130 LSCKVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 186
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 106 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 163
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 164 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 223
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 224 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 273
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A + Y+ N + +E L +LF + GP ++V V D + +G+GFV F ED
Sbjct: 189 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHED 247
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A A+ +N +L GK I V +A QD+ + G NL++ NLD
Sbjct: 248 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 307
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ +
Sbjct: 308 GIDDERLRKEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 364
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 365 KPLYVALAQRKEER 378
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D GA N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 180 VAQD-EHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 229
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 152 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKHVN 210
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N++ +V + + F FG VT
Sbjct: 211 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINHEVTDDEFRELFEKFGE-VT 269
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G +RGFGF+++ + EA+ A++ +NG+ + + V A KK + E R
Sbjct: 270 SSSLARDQE-GKTRGFGFVNFTTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELR 328
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 329 RSYEAARLEKAN 340
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 59/225 (26%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ +VT++ ELF + G V + + +D+ +G+GFV F + E A A+ LN
Sbjct: 245 YVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGKT-RGFGFVNFTTHEAAAKAVDDLN 303
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K + G NL+I NL DVD++ L
Sbjct: 304 GKDFRGQDLYVGRAQKKHEREEELRRSYEAARLEKANKYQGVNLYIKNLGDDVDDEKLRA 363
Query: 131 TFSAFGVIVTNPKIMRDP----------------------------------------DT 150
FS +G I T+ K+MRD
Sbjct: 364 MFSEYGPI-TSAKVMRDSLIEGEEKDEKDKENKKEGETKEEEEKEGSAEKKTEKKGDRKL 422
Query: 151 GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 423 GKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVR 467
>gi|6324895|ref|NP_014964.1| Hsh49p [Saccharomyces cerevisiae S288c]
gi|2500588|sp|Q99181.1|HSH49_YEAST RecName: Full=Protein HSH49
gi|940850|emb|CAA62174.1| orf 06142 [Saccharomyces cerevisiae]
gi|1420700|emb|CAA99639.1| HSH49 [Saccharomyces cerevisiae]
gi|45270764|gb|AAS56763.1| YOR319W [Saccharomyces cerevisiae]
gi|151945399|gb|EDN63642.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407618|gb|EDV10885.1| protein HSH49 [Saccharomyces cerevisiae RM11-1a]
gi|207340889|gb|EDZ69099.1| YOR319Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272549|gb|EEU07528.1| Hsh49p [Saccharomyces cerevisiae JAY291]
gi|259149795|emb|CAY86599.1| Hsh49p [Saccharomyces cerevisiae EC1118]
gi|285815190|tpg|DAA11083.1| TPA: Hsh49p [Saccharomyces cerevisiae S288c]
gi|323303013|gb|EGA56817.1| Hsh49p [Saccharomyces cerevisiae FostersB]
gi|323307266|gb|EGA60547.1| Hsh49p [Saccharomyces cerevisiae FostersO]
gi|323331441|gb|EGA72857.1| Hsh49p [Saccharomyces cerevisiae AWRI796]
gi|323335366|gb|EGA76653.1| Hsh49p [Saccharomyces cerevisiae Vin13]
gi|323346364|gb|EGA80653.1| Hsh49p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762976|gb|EHN04508.1| Hsh49p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296647|gb|EIW07749.1| Hsh49p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 213
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 117/195 (60%), Gaps = 15/195 (7%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGN+DP++T+E L+ELF+Q PV+ + PKD+V +QGY F+EF ++ DA YAIK+
Sbjct: 10 TVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKI 69
Query: 86 L-NMIKLYGKPIRVNKASQDKKSLDV-----------GANLFIGNLDPDVDEKLLYDTFS 133
+ N ++LY + I+V + + + ++ A LFI NL +D L F+
Sbjct: 70 MNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQLVKIFN 129
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG ++ P+I G + ++ ++ FE +D AI+++N Q + N +ITV YA+K++
Sbjct: 130 KFGKLIREPEIFY-LSNGKLKC-AYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKEN 187
Query: 194 TKGE-RHGTPAERIL 207
KG ++G +R+L
Sbjct: 188 GKGNAKYGDDVDRLL 202
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D D G SRGFGF+S++ E + A++ MNG+ L + I V A KK
Sbjct: 220 -VKVMTD-DHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKK 269
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L E F Q G ++V V D +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD-HGKSRGFGFVSFERHEDAQKAVDDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFTPFGSI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S ED + A++
Sbjct: 47 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 106
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 107 ELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILS-CK 165
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L +++ V +
Sbjct: 166 VAQD-EHGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGH 209
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 138 FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETAEAANNAIKHVN 196
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D DV + D F G
Sbjct: 197 GMLLNEKKVFVGHHIPKKERMSKFEEMKANF---TNIYVKNIDLDVTDDEFRDLFEKHGD 253
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ I RD D G SRGFGF++Y EA+ A+E +N +++ V A KK + E
Sbjct: 254 I-TSASIARD-DQGKSRGFGFVNYIKHEAASVAVETLNDTEFHGQKLYVGRAQKKHEREE 311
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D VT++ +LF + G + + + +D +G+GFV + E A A++ LN
Sbjct: 231 YVKNIDLDVTDDEFRDLFEKHGDITSASIARDD-QGKSRGFGFVNYIKHEAASVAVETLN 289
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ +G+ + V +A + +K+S G NL+I NL+ DVD++ L D
Sbjct: 290 DTEFHGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRD 349
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 350 MFTPFGTI-TSAKVMRD 365
>gi|156086682|ref|XP_001610750.1| polyadenylate binding protein [Babesia bovis T2Bo]
gi|154798003|gb|EDO07182.1| polyadenylate binding protein, putative [Babesia bovis]
Length = 585
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 3/204 (1%)
Query: 12 NLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
N GQ + A+ YVGNL P+VTE +L+E+F GPV ++ V +D +T GY +V
Sbjct: 23 NYQGQPARSSFNSASLYVGNLLPEVTEAMLYEVFNGIGPVASIRVCRDSLTRKSLGYAYV 82
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYD 130
+ + +DA+ A++ LN I++ G+P R+ + +D G N+F+ NLD +D K LYD
Sbjct: 83 NYYNFQDAEAALECLNYIEIKGQPARIMWSERDPSLRKSGTGNIFVKNLDKAIDTKALYD 142
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
TFS FG I++ K+ D GNS+G+GF+ Y + E++ AIE +NG + N Q++V+
Sbjct: 143 TFSHFGTILS-CKVAIDS-LGNSKGYGFVHYTTEESAKEAIEKVNGMLIGNSQVSVAPFL 200
Query: 191 KKDTKGERHGTPAERILAANNPSS 214
+++ + G + N P +
Sbjct: 201 RRNERTSTVGDVFTNLYVRNFPDT 224
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ +V NLD + + L++ F G +++ V D + N +GYGFV + +EE
Sbjct: 117 SLRKSGTGNIFVKNLDKAIDTKALYDTFSHFGTILSCKVAIDSLGN-SKGYGFVHYTTEE 175
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFS 133
A AI+ +N + + + V + + DV NL++ N E L+ TFS
Sbjct: 176 SAKEAIEKVNGMLIGNSQVSVAPFLRRNERTSTVGDVFTNLYVRNFPDTWTEDDLHQTFS 235
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
+G I + +++ D G R F F+++ + AA+E NG
Sbjct: 236 KYGEITS--LLLKSDDKG--RRFAFVNFVDTNMAKAAMEGENG 274
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 24/190 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N TE+ L + F + G + ++ + D + + + FV F A A++ N
Sbjct: 217 YVRNFPDTWTEDDLHQTFSKYGEITSLLLKSD---DKGRRFAFVNFVDTNMAKAAMEGEN 273
Query: 88 MIKLYG--KPIRV----NKA-------------SQDKKSLDVGANLFIGNLDPDVDEKLL 128
+K +P+ V +KA +QD+++ +G NL+I NLD D D+ L
Sbjct: 274 GVKFESVEEPMMVCQHMDKARRYAMLKAQYDSNAQDQRNKFMGVNLYIKNLDDDFDDDGL 333
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
D F +G VT+ K+MRD + G SRGFGF+ + + + A+ M+ + + N+ + V
Sbjct: 334 RDLFKQYGT-VTSSKVMRDHN-GVSRGFGFVCFSRPDEATKAVAGMHLKLVKNKPLYVGL 391
Query: 189 AYKKDTKGER 198
A K++ + R
Sbjct: 392 AEKREQRASR 401
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 14/225 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ Y GN+ QVTE LL E+F GP+ + + KD+ + YGFV + A AI
Sbjct: 60 SVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSS-----YGFVHYFDRRCASMAIM 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN ++G+P++VN A + D + N+F+G+L P+V + L+D+FSAF ++
Sbjct: 115 TLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNS-CSDA 173
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
++M D TG SRGFGF+S+ + + + AI MNG++L +RQI ++A K T GE +H +
Sbjct: 174 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATFGEDKHSS 233
Query: 202 PAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP 246
+ ++ N SS+ R S + +N PQ G + P
Sbjct: 234 DGKSVVELTNGSSEDGRE----LSNEDAPENNPQYTTVYVGNLSP 274
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 42/200 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ L++ F + V D+ T +G+GFV FR+++DA AI +N
Sbjct: 147 FVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 206
Query: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
L + IR N A+ +DK S D +
Sbjct: 207 GKWLSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQYTT 266
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GNL P+V + L+ F G + ++ RD +GFGF+ Y++ + + AI+
Sbjct: 267 VYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRD------KGFGFVRYNTHDEAALAIQ 320
Query: 173 AMNGQ-YLCNRQITVSYAYK 191
N Q YL +RQI S+ K
Sbjct: 321 MGNAQPYLFSRQIKCSWGNK 340
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Q T YVGNL P+VT+ L LF + AG + V V +D+ G+GFV + + ++A
Sbjct: 263 QYTTVYVGNLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDK------GFGFVRYNTHDEAA 316
Query: 81 YAIKVLNMI-KLYGKPIRVN 99
AI++ N L+ + I+ +
Sbjct: 317 LAIQMGNAQPYLFSRQIKCS 336
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 49 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 108
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 109 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS-CK 167
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 168 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 218
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 99/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 140 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 198
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+D DV E+ + F FG I T
Sbjct: 199 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEI-T 257
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + E++ AA++ MN + + +++ V A KK + E
Sbjct: 258 SATLSRDQE-GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREE 313
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H +++++ + Y+ N+D VTEE ELF + G + + + +D+
Sbjct: 208 FVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQ-E 266
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + E A A+ +N ++ + + V +A + +K
Sbjct: 267 GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEK 326
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPD 149
S G NL++ NL DVD++ L + F +G I T+ K+MRD +
Sbjct: 327 ASKYQGVNLYVKNLTDDVDDEKLRELFGPYGTI-TSAKVMRDTN 369
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 110/179 (61%), Gaps = 3/179 (1%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA + A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + +
Sbjct: 45 SANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFG 136
D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 164
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 165 NILS-CKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 221
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 143 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 201
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+D +V ++ F FG I T
Sbjct: 202 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI-T 260
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + +++ AA++ MN + + +++ V A KK + E
Sbjct: 261 SATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREE 316
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 73/254 (28%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H +++++ + Y+ N+D +VT+E ++F + G + + + +D+
Sbjct: 211 FVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQ-E 269
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + + A A+ +N ++ G+ + V +A + +K
Sbjct: 270 GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEK 329
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT--------------- 150
S G NL++ NL DVD++ L + FS FG I T+ K+MRD T
Sbjct: 330 ASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTI-TSAKVMRDTVTAGETSESEKEKESNK 388
Query: 151 -----------------------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
G S+GFGF+ + S + + A+ MN + +
Sbjct: 389 ENEKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNG 448
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +KD +
Sbjct: 449 KPLYVALAQRKDVR 462
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 49 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 108
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 109 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS-CK 167
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 168 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 218
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 99/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 140 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 198
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+D DV E+ + F FG I T
Sbjct: 199 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEI-T 257
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + E++ AA++ MN + + +++ V A KK + E
Sbjct: 258 SATLSRDQE-GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREE 313
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+D VTEE ELF + G + + + +D+ +G+GFV F + E A A+ +N
Sbjct: 233 YIKNIDQDVTEEEFRELFEKFGEITSATLSRDQ-EGKSRGFGFVNFSTHESAQAAVDEMN 291
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL DVD++ L +
Sbjct: 292 EKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRE 351
Query: 131 TFSAFGVIVTNPKIMRDPD 149
F +G I T+ K+MRD +
Sbjct: 352 LFGPYGTI-TSAKVMRDTN 369
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 114 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNATADGEKALE 173
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 174 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 232
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V Y KKD
Sbjct: 233 VAQD-ENGNSKGYGFVHYETDEAAANAIKHVNGMLLNEKKVYVGYHIPKKD 282
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 205 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAANAIKHVN 263
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ +V ++ + F+ +G VT
Sbjct: 264 GMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNIPAEVTDEEFRELFAKYG-DVT 322
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + R D G SRGFGF+++ + EA+ A+E +NG+ +++ V A KK + E R
Sbjct: 323 SSSLAR-SDEGKSRGFGFVNFTTHEAASKAVEELNGKDFRGQELYVGRAQKKHEREEELR 381
Query: 199 HGTPAERILAAN 210
A R AN
Sbjct: 382 RSYEAARQEKAN 393
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 95/222 (42%), Gaps = 56/222 (25%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ +VT+E ELF + G V + + + +G+GFV F + E A A++ LN
Sbjct: 298 YVKNIPAEVTDEEFRELFAKYGDVTSSSLARSD-EGKSRGFGFVNFTTHEAASKAVEELN 356
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A Q+K + G NL+I NL DVD+ L
Sbjct: 357 GKDFRGQELYVGRAQKKHEREEELRRSYEAARQEKANKYQGVNLYIKNLGDDVDDDKLRQ 416
Query: 131 TFSAFGVIVTNPKIMRDP-------------------------------------DTGNS 153
FS +G I T+ K+MRD G S
Sbjct: 417 MFSEYGPI-TSAKVMRDSVVESAAEDEKDKENKKEDEEEKEGETAEKKAETKEKRKLGKS 475
Query: 154 RGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+GFGF+ + + + + A+ MN + + N+ + V+ A +KD +
Sbjct: 476 KGFGFVCFSNPDDATKAVTEMNQRMIDNKPLYVALAQRKDVR 517
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 54 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 114 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS-CK 172
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 173 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 223
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 145 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 203
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I NLD ++D+ F FG I T
Sbjct: 204 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEI-T 262
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E R
Sbjct: 263 SATLSRDQE-GKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELR 321
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 322 KQYEAARLEKAS 333
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H +++++ + Y+ NLD ++ ++ ++F + G + + + +D+
Sbjct: 213 FVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQ-E 271
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + E A A++ +N ++ + + V +A + +K
Sbjct: 272 GKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEK 331
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
S G NL++ NL D+D++ L + F +G I T+ K+MRD +
Sbjct: 332 ASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTI-TSAKVMRDTNV 375
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M DP TG S+GFGF+S++ E ++ A+E MNG+ + + + V A KK
Sbjct: 220 -VKVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D T +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGAI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 110/179 (61%), Gaps = 3/179 (1%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA + A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + +
Sbjct: 45 SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFG 136
D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 164
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 165 NILS-CKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 221
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 143 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 201
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+D +V ++ F FG I T
Sbjct: 202 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI-T 260
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + +++ AA++ MN + + +++ V A KK + E
Sbjct: 261 SATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREE 316
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 75/256 (29%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H +++++ + Y+ N+D +VT+E ++F + G + + + +D+
Sbjct: 211 FVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQ-E 269
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + + A A+ +N ++ G+ + V +A + +K
Sbjct: 270 GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEK 329
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT--------------- 150
S G NL++ NL DVD++ L + FS FG I T+ K+MRD T
Sbjct: 330 ASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTI-TSAKVMRDTVTTGETSESEKEKEKES 388
Query: 151 -------------------------------GNSRGFGFISYDSFEASDAAIEAMNGQYL 179
G S+GFGF+ + S + + A+ MN + +
Sbjct: 389 NKENEKEGEEKTEEKPKESEEEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMV 448
Query: 180 CNRQITVSYAYKKDTK 195
+ + V+ A +KD +
Sbjct: 449 NGKPLYVALAQRKDVR 464
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ V+E L+E+F Q GPVV++ V +D +T GY +V + S +DA A++
Sbjct: 24 TSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRALE 83
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN + GKPIR+ + +D G AN+FI NLD +D K L+DTFSAFG I++ K
Sbjct: 84 LLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKALHDTFSAFGGILS-CK 142
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D +G S+G+GF+ ++ E++ +AIE +NG L ++Q+ V
Sbjct: 143 VATD-SSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFV 184
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL T++ L ++F GP+ + V +D + +GFV F +DA A++ L
Sbjct: 205 VYVKNLGENTTDDELKKVFGAYGPISSAVVMRDN-EGKSKCFGFVNFELADDAAKAVEAL 263
Query: 87 NMIKLYGKPIRVNKA--------------SQDKKSLDV---GANLFIGNLDPDVDEKLLY 129
N K K V +A Q++KS G NL++ NLD VD++ L
Sbjct: 264 NGKKQDEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNLDDAVDDEKLR 323
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ +G I T+ K+M+DP G SRG GF+++ + E + A+ MN + + ++ + V+ A
Sbjct: 324 ELFAEYGTI-TSCKVMKDPQ-GQSRGSGFVAFSTPEEATRAVTEMNTKMVGSKPLYVALA 381
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 382 QRKEERRVR 390
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q Y+ NLD V +E L ELF + G + + V KD +G GFV F + E+A
Sbjct: 301 EKYQGVNLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDP-QGQSRGSGFVAFSTPEEA 359
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+ +N + KP+ V A + ++
Sbjct: 360 TRAVTEMNTKMVGSKPLYVALAQRKEE 386
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V ++++G+L+ +V E LY+ FS G +V+ ++ RD T S G+ +++Y S + +
Sbjct: 22 VSTSVYVGDLEHNVSEAQLYEIFSQTGPVVS-IRVCRDLITRRSLGYAYVNYHSAQDATR 80
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A+E +N + + I + ++++
Sbjct: 81 ALELLNFTPVNGKPIRIMFSHR 102
>gi|156836482|ref|XP_001642301.1| hypothetical protein Kpol_224p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112796|gb|EDO14443.1| hypothetical protein Kpol_224p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 217
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 119/206 (57%), Gaps = 15/206 (7%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G S +N D + YVGN+DP +T+ELL+ELFVQ P+ + PKD+V HQGY F++F
Sbjct: 3 GSGSGFKNPDLSVYVGNIDPSITKELLYELFVQISPIAKINYPKDKVLQTHQGYAFIDFY 62
Query: 75 SEEDADYAIKVL-NMIKLYGKPIRVNKASQD---KKSLDVG--------ANLFIGNLDPD 122
+EEDA+YAI+ N ++L + ++V K + + K S ++ A +F+ NLD
Sbjct: 63 TEEDANYAIQAFNNNVQLNNRVLKVRKTNNNISSKSSTNLSQATSVTPYAKIFVKNLDSS 122
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
VD L F FG + +I G R ++ + +E +D AI++++GQ + N+
Sbjct: 123 VDVAYLSKLFKKFGSLARESEIFH-LSNGELRC-AYVYFKDYEKADEAIKSLDGQLVTNK 180
Query: 183 QITVSYAYKKD-TKGERHGTPAERIL 207
+I + YA+K++ K ++G +R+L
Sbjct: 181 RINIEYAFKENGDKKAKYGEDVDRLL 206
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP TG S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-TGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D T +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 10/180 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L+E F QAG VV+V V +D T GYG+V + + +DA A+
Sbjct: 39 TSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 98
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN + L G+ IRV + +D +KS VG N+FI NLD +D K L++TFSAFG I++
Sbjct: 99 ELNFMALNGRAIRVMYSVRDPSLRKS-GVG-NIFIKNLDKSIDHKALHETFSAFGPILS- 155
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER 198
K+ DP +G S+G+GF+ YD+ EA+ AI+ +NG L ++Q+ V + ++D GE+
Sbjct: 156 CKVAVDP-SGQSKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEK 214
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S E+ + YV NL +++E L ++F + G + + +D +G+GFV F + +
Sbjct: 211 SGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDG-EGKSKGFGFVNFENSD 269
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLD 120
DA A+ LN K V KA + K++ D G+NL++ NLD
Sbjct: 270 DAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLD 329
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
V + L + F+ FG I T+ K+MRDP TG SRG GF+++ + E + AI MNG+ +
Sbjct: 330 ESVTDDKLREHFAPFGTI-TSCKVMRDP-TGVSRGSGFVAFSTPEEASRAITEMNGKMIV 387
Query: 181 NRQITVSYAYKKDTKGER 198
+ + V+ A +K+ + R
Sbjct: 388 TKPLYVALAQRKEDRKAR 405
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A+++Q + YV NLD VT++ L E F G + + V +D T + +G GFV F +
Sbjct: 312 KEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDP-TGVSRGSGFVAFST 370
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A AI +N + KP+ V A +D+K+
Sbjct: 371 PEEASRAITEMNGKMIVTKPLYVALAQRKEDRKA 404
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVMKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD+ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V + L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 102/164 (62%), Gaps = 3/164 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+LDP VTE L+E+F + G V ++ V +B VT Y +V ++ E+A++A+
Sbjct: 60 ASLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLCYAYVNYQKREEAEHALD 119
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
L + GK R+ + +D G N+FI NL PD+D K LYDTFS FG I++ K
Sbjct: 120 TLAFCDIKGKQCRIMWSQRDPSMRKKGTGNVFIKNLHPDIDNKTLYDTFSTFGKILS-CK 178
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
I D + G+S+GFGF+ YD E++ AAIE +NG L N ++ V+
Sbjct: 179 IATD-EHGHSKGFGFVHYDDAESAKAAIENVNGMLLNNMEVYVA 221
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 132/307 (42%), Gaps = 51/307 (16%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N P++TE+ L E+F G V + Y+P D +G+GFV F +A A+ LN
Sbjct: 244 YVKNFGPEMTEDQLREMFEAYGKVTSTYLPTDN-EGKARGFGFVNFEDHXEAAKAVDALN 302
Query: 88 MIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLLY 129
+L G I R K + ++SL G NLF+ NLD +D+ L
Sbjct: 303 EKELEGGRILYVGRAQKKREREESLRKQWQQARQERISKYQGVNLFVKNLDDTIDDTKLK 362
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ +G I T+ K+M + D G SRGFGF+ Y E + AI M+ + + + + V+ A
Sbjct: 363 EEFAPYGKI-TSAKVMTN-DAGKSRGFGFVCYTKPEEATRAINEMHQRMVMGKPLYVALA 420
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPY 249
+K+ RH +++ N Q++ G AP G G +PP P
Sbjct: 421 QRKEV---RHNQLSQQFQQRNQMRLQQAA-----VQGGMGQFVAPMFYGQNAGFIPPMP- 471
Query: 250 ANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPP 309
G P + P Q A P GQGVP P QFR
Sbjct: 472 -AGVRGAPFAGNGAPQMMMQQGASRP----------------GQGVP----VSPGQFRVG 510
Query: 310 PNMPPPP 316
PN P P
Sbjct: 511 PNGQPVP 517
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVMKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD+ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 269
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V + L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRREFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 33 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 92
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 93 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 150
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 151 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 204
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 124 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 181
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD+ L + FS FG ++
Sbjct: 182 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLS 241
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 242 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 291
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V ++ L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 207 AKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 265
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 266 ANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 325
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 326 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 382
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 383 KPLYVALAQRKEER 396
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M DP TG S+GFGF+S++ E ++ A+E MNG+ + + + V A KK
Sbjct: 220 -VKVMTDP-TGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D T +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 105/165 (63%), Gaps = 3/165 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ YVG+L+P VTE LL+E+F GPV ++ V +D VT GY +V F + DA+ A
Sbjct: 8 QSASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERA 67
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN + G+P R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 68 LDTLNYTLIKGRPCRIMWSHRDPSIRKSGQGNIFIKNLDKSIDNKALYDTFSAFGNILS- 126
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K++ D GNS+G+GF+ Y++ EA+D+AI +NG+ L + + V
Sbjct: 127 CKVVTDG-KGNSKGYGFVHYETSEAADSAIAKVNGKMLNGKIVYV 170
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 95/184 (51%), Gaps = 20/184 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKD-RVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ NL TEE L F G V + + KD R ++ + + FV F E A A + L
Sbjct: 192 YIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPR--DIGRQFAFVNFEDHEAAHRATEEL 249
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV-------------GANLFIGNLDPDVDEKLLYDTFS 133
N KL K + V +A + + G NL+I NLD V+++ L+ FS
Sbjct: 250 NGRKLGDKEVYVGRAQKKSERESFLRKLREERAQKYQGINLYIKNLDDTVNDEELHKLFS 309
Query: 134 A--FGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
A FG I T+ K+M D D GNSRGFGF+ Y + E + A+ MNG+ + N+ I V+ A +
Sbjct: 310 ALPFGQI-TSCKVMSD-DKGNSRGFGFVCYTNPEDASKAVSEMNGKMVANKPIYVALAER 367
Query: 192 KDTK 195
KD +
Sbjct: 368 KDVR 371
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV + + E AD AI +N
Sbjct: 101 FIKNLDKSIDNKALYDTFSAFGNILSCKVVTDGKGN-SKGYGFVHYETSEAADSAIAKVN 159
Query: 88 MIKLYGKPIRVNKASQDKKSL-----DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
L GK + V + K+ + N++I NL E+ L F AFG V +
Sbjct: 160 GKMLNGKIVYVGRFIARKERTPGSDPEKFTNIYIKNLGEAYTEEDLKRDFGAFGT-VQSA 218
Query: 143 KIMRDP-DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+M+DP D G R F F++++ EA+ A E +NG+ L ++++ V A KK +
Sbjct: 219 VLMKDPRDIG--RQFAFVNFEDHEAAHRATEELNGRKLGDKEVYVGRAQKKSER 270
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQA--GPVVNVYVPKDRVTNLHQGYGFV 71
L + A++ Q Y+ NLD V +E L +LF G + + V D N +G+GFV
Sbjct: 277 LREERAQKYQGINLYIKNLDDTVNDEELHKLFSALPFGQITSCKVMSDDKGN-SRGFGFV 335
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRV 98
+ + EDA A+ +N + KPI V
Sbjct: 336 CYTNPEDASKAVSEMNGKMVANKPIYV 362
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F +AGP++++ V +D +T + Y +V F+ +DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K+LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 11/182 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NLD + ++L++ G +++ V D N +GYGFV F + E
Sbjct: 92 SLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILSCKVVCDE--NGSKGYGFVHFETHE 149
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYD 130
A+ AI+ +N + L + + V + S+ ++ ++GA N++I N D+D++ L D
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKD 209
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A
Sbjct: 210 LFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQ 267
Query: 191 KK 192
KK
Sbjct: 268 KK 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD D+D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 14/172 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSK----TL 215
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 216 SVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 266
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 24/194 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELF---SKTLSVKVMRD-PSGKSKGFGFVSYEKHED 240
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 241 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 300
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 301 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 357
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 358 KPLYVALAQRKEER 371
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 7/204 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTSDGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD--TKGERHG 200
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD +K E
Sbjct: 178 VAQD-EHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMK 236
Query: 201 TPAERILAAN-NPSSQKSRPHTLF 223
I N NP + LF
Sbjct: 237 ANFTNIYVKNVNPEASDDEFRELF 260
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 150 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAAQQAIKHVN 208
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N++P+ + + F +G I T
Sbjct: 209 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNIYVKNVNPEASDDEFRELFERYGEI-T 267
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD D G SRGFGF++Y + E++ A++ +NG+ + + V A KK + E R
Sbjct: 268 SSSLARDQD-GKSRGFGFVNYTTHESAYKAVDELNGKDFKGQDLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 327 KSYEAARLEKAS 338
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 56/222 (25%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++P+ +++ ELF + G + + + +D+ +G+GFV + + E A A+ LN
Sbjct: 243 YVKNVNPEASDDEFRELFERYGEITSSSLARDQ-DGKSRGFGFVNYTTHESAYKAVDELN 301
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K S G NL+I NLD DVD++ L
Sbjct: 302 GKDFKGQDLYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLDDDVDDEKLRH 361
Query: 131 TFSAFGVIVTNPKIMR-------------------------------------DPDTGNS 153
FS FG I T+ K+MR D G S
Sbjct: 362 MFSEFGPI-TSAKVMRDAPSDGSDEEKEDEQEAEPKKEGNVVEADEEGSEKKGDKKFGKS 420
Query: 154 RGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+GFGF+ + + + + A+ M+ + + + + V+ A +KD +
Sbjct: 421 KGFGFVCFSNPDDATKAVAEMSQRMINGKPLYVALAQRKDVR 462
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N ++D++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N ++ +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|50290493|ref|XP_447678.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526988|emb|CAG60615.1| unnamed protein product [Candida glabrata]
Length = 211
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 119/198 (60%), Gaps = 16/198 (8%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+AT YVGN+D +VT+ELL+ELF Q G V V PKD+++ +QG+ F+EF S DADY +
Sbjct: 5 EATIYVGNIDTKVTKELLYELFTQVGQVKKVKYPKDKISQEYQGFAFIEFFSTADADYVL 64
Query: 84 KVL-NMIKLYGKPIRVNKASQ--------DKKSLDVG----ANLFIGNLDPDVDEKLLYD 130
V+ N +KLY K +++ +++Q K LD A +F+ ++ V+ + L
Sbjct: 65 NVMNNNVKLYQKVLKIRRSNQAVQKDDANKKHELDASLLPVAKVFVKDIADTVEVRHLTQ 124
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG + P++ G R FI + ++ +D AI+ +NGQ++ N++ ++ YA+
Sbjct: 125 LFSKFGPLAKTPEVFT-VSNGEVRC-AFIYFKFYDNADLAIQTLNGQFIMNKKASLEYAF 182
Query: 191 KKD-TKGERHGTPAERIL 207
K++ K R+GT A+RIL
Sbjct: 183 KENGRKNLRYGTEADRIL 200
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 48 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 107
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 108 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILS-CK 166
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 167 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 217
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 139 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 197
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I NLD ++ E+ F FG I T
Sbjct: 198 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEI-T 256
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF++Y + +++ AA++ MN + + +++ V A KK + E
Sbjct: 257 SATLSRDQE-GKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHEREE 312
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 79/260 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H +++++ + Y+ NLD +++EE ++F + G + + + +D+
Sbjct: 207 FVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQ-E 265
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV + + + A A+ +N ++ G+ + V +A + +K
Sbjct: 266 GKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEK 325
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT--------------- 150
S G NL++ NL D+D++ L + F+ +G I T+ K+MRD +
Sbjct: 326 ASKYQGVNLYVKNLTDDIDDEKLREMFAPYGTI-TSAKVMRDTNIERTQTPDSDKEKKEE 384
Query: 151 -----------------------------------GNSRGFGFISYDSFEASDAAIEAMN 175
G S+GFGF+ + S + + A+ MN
Sbjct: 385 SKEEKPEAAEKTEEAAKESGDDQDKENKKSDKKVLGKSKGFGFVCFSSPDEASKAVTEMN 444
Query: 176 GQYLCNRQITVSYAYKKDTK 195
+ + + + V+ A +KD +
Sbjct: 445 QRMINGKPLYVALAQRKDVR 464
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F +AGP++++ V +D +T Y +V F+ +DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K+LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 11/182 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NLD + ++L++ G +++ V D N +GYGFV F + E
Sbjct: 92 SLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHE 149
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYD 130
A+ AI+ +N L + + V + S+ ++ ++GA N++I N D+D++ L D
Sbjct: 150 AAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKD 209
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A
Sbjct: 210 LFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQ 267
Query: 191 KK 192
KK
Sbjct: 268 KK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD D+D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+M DP TG S+GFGF+S++ E ++ A+E MNG+ + + + V A K K ER
Sbjct: 220 -VKVMTDP-TGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMLFVGRAQK---KAERQA 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D T +G+GFV F E+
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEE 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F +AGP++++ V +D +T Y +V F+ +DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K+LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE 182
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD D+D++ L
Sbjct: 252 NGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 11/182 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NLD + ++L++ G +++ V D N +GYGFV F + E
Sbjct: 92 SLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHE 149
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYD 130
A+ AI+ +N L + + V + S+ ++ ++GA N++I N D+D++ L D
Sbjct: 150 AAERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKD 209
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L + I V A
Sbjct: 210 LFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQ 267
Query: 191 KK 192
KK
Sbjct: 268 KK 269
>gi|58271356|ref|XP_572834.1| polyadenylate-binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114714|ref|XP_774065.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819167|sp|P0CP47.1|PABP_CRYNB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|338819168|sp|P0CP46.1|PABP_CRYNJ RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|50256695|gb|EAL19418.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229093|gb|AAW45527.1| polyadenylate-binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 673
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 46 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 105
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 106 HLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILS-CK 164
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G SRGF F+ Y + EA+DAAI+A+NG L ++++ V + K +
Sbjct: 165 VGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKER 215
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 30/228 (13%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q Y+ N+D +VT+ +L GP ++V + +D + +G+GFV + + E A
Sbjct: 223 RAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDE-KGVSKGFGFVNYENHESAR 281
Query: 81 YAIKVLNMIKLYGKPIRVNKA------------SQDKKSLD-----VGANLFIGNLDPDV 123
A+ LN ++ GK + +A S ++K L+ G NL++ NLD +
Sbjct: 282 KAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEW 341
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F AFG I T+ K+MRD D+G SRGFGF+ Y S + + A+ MNG+ + +
Sbjct: 342 DDDRLRAEFEAFGTI-TSSKVMRD-DSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKP 399
Query: 184 ITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
+ V+ A +KD R A + +Q+++ + +G P +Q
Sbjct: 400 LYVALAQRKDV----------RRQALESQIAQRAQQRMQYGAGFPGMQ 437
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V A+L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + +
Sbjct: 44 VSASLYVGELDPSVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGER 102
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A+E +N + + + ++ +
Sbjct: 103 ALEHLNYSLIKGQSCRIMWSQR 124
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 105/164 (64%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L+ VTE L+E F GPVV++ V +D +T GY +V F+S DA +AI
Sbjct: 32 SSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAID 91
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
VLN + GKPIRV + +D + VG N+FI NLD +D K L DTF+ FG I T+
Sbjct: 92 VLNFQVINGKPIRVLYSQRDPAVRRSGVG-NIFIKNLDKAIDNKALLDTFAQFGTI-TSA 149
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D GNS+G+GF+ +++ EA+ AAI+ +NG L ++Q+ V
Sbjct: 150 KVAMDS-AGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYV 192
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 93/172 (54%), Gaps = 13/172 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F Q G + + V D N +GYGFV+F + E A AI +N
Sbjct: 123 FIKNLDKAIDNKALLDTFAQFGTITSAKVAMDSAGN-SKGYGFVQFETAEAAQAAIDNVN 181
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
++L K + R ++++Q + + N+++ NL ++ ++ L + F+ G VT
Sbjct: 182 GMELNDKQVYVGPFQRRADRSTQGEAKFN---NVYVKNLSENLSDEKLREKFAEHGA-VT 237
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ IM+D + G S+GFGF+ ++S E + +A+E ++G + V A KK
Sbjct: 238 SCVIMKDEE-GKSKGFGFVCFESPEGAASAVENLDGYTEDEKTWVVCRAQKK 288
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 25/200 (12%)
Query: 16 QHSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
Q A+R+ A YV NL +++E L E F + G V + + KD +G+GF
Sbjct: 196 QRRADRSTQGEAKFNNVYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDE-EGKSKGFGF 254
Query: 71 VEFRSEEDADYAIKVLNMIKLYGKP---IRVNKASQDKKSLDV--------------GAN 113
V F S E A A++ L+ K R K ++ + L GAN
Sbjct: 255 VCFESPEGAASAVENLDGYTEDEKTWVVCRAQKKAEREAELKAKFEAERRERMEKMAGAN 314
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
L+I NL+ D++ L + F+ FG I T+ ++MRD +G SRG F+++ S + + A+
Sbjct: 315 LYIKNLEEGTDDEKLRELFNEFGTI-TSCRVMRDA-SGASRGSAFVAFSSPDEATRAVTE 372
Query: 174 MNGQYLCNRQITVSYAYKKD 193
MNG+ + + + V+ A +K+
Sbjct: 373 MNGKMVGAKPLYVALAQRKE 392
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVMKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD+ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 269
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V + L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRREFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 54 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 114 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS-CK 172
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 173 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 223
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 145 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 203
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I NLD ++D+ F FG I T
Sbjct: 204 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEI-T 262
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E R
Sbjct: 263 SATLSRDQE-GKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELR 321
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 322 KQYEAARLEKAS 333
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H +++++ + Y+ NLD ++ ++ ++F + G + + + +D+
Sbjct: 213 FVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQ-E 271
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + E A A++ +N ++ + + V +A + +K
Sbjct: 272 GKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEK 331
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
S G NL++ NL D+D++ L + F +G I T+ K+MRD +
Sbjct: 332 ASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTI-TSAKVMRDTNV 375
>gi|401839791|gb|EJT42839.1| HSH49-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 213
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 120/199 (60%), Gaps = 15/199 (7%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
+ D+T YVGN+DP++T++ L+ELF+Q PV+ + PKD+V +QGY F+EF ++EDA+Y
Sbjct: 6 DSDSTVYVGNIDPRITKDQLYELFIQINPVLRIKYPKDKVLQTYQGYAFIEFYNKEDAEY 65
Query: 82 AIKVL-NMIKLYGKPIRV----------NKASQDKKSLDV-GANLFIGNLDPDVDEKLLY 129
I+++ N +KLY + I+V N +S + K + + A LF+ NL +D L
Sbjct: 66 VIQIMNNTVKLYDRLIKVRQVTNSVGTANLSSNNSKDIALPIAKLFVKNLADSIDIDQLA 125
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG ++ P+I G + + ++ FE +D AI+++N Q + N +IT+ YA
Sbjct: 126 KIFGKFGKTISKPEIFH-LSNGKLKC-ACVYFEDFEKADLAIKSLNNQLVANSRITIDYA 183
Query: 190 YKKDTKGE-RHGTPAERIL 207
+K++ K ++G +R+L
Sbjct: 184 FKENGKASTKYGNEVDRLL 202
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 52 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 111
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 112 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS-CK 170
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 171 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 221
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 99/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 143 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 201
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I NLD ++D+ F FG I T
Sbjct: 202 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEI-T 260
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E
Sbjct: 261 SATLSRDQE-GKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREE 316
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NLD ++ ++ ++F + G + + + +D+ +G+GFV F + E A A++ +N
Sbjct: 236 YIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQ-EGKSRGFGFVNFSTHESAQAAVEEMN 294
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL D+D++ L +
Sbjct: 295 DKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRE 354
Query: 131 TFSAFGVIVTNPKIMRDPDT 150
F +G I T+ K+MRD +
Sbjct: 355 LFGPYGTI-TSAKVMRDTNV 373
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 28 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 87
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 88 TMNFDVMKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 145
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 146 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 199
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 119 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 176
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD+ L + FS FG ++
Sbjct: 177 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 236
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 237 -VKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 286
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V + L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 202 AKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHED 260
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 261 ANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 320
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 321 TIDDEKLRREFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 377
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 378 KPLYVALAQRKEER 391
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N ++D++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N ++ +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 9/178 (5%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
QHSA + YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + +
Sbjct: 58 QHSA------SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNN 111
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSA 134
D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTFS
Sbjct: 112 TADGERALEDLNYTSIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFSQ 171
Query: 135 FGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I++ K+ +D + GNS+G+GF+ Y++ EA++ AI+++NG L ++++ V + K
Sbjct: 172 FGNILS-CKVAQD-ELGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVFVGHHIAK 227
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 99/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F Q G +++ V +D + N +GYGFV + + E A+ AIK +N
Sbjct: 152 FIKNLDAAIDNKALHDTFSQFGNILSCKVAQDELGN-SKGYGFVHYETAEAANQAIKSVN 210
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN ++I N+D V ++ F +G +V+
Sbjct: 211 GMLLNDKKVFVGHHIAKRDRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLFEPYGEVVS 270
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I RD + G SRGFGF+++ S E++ A+E +N + +++ V A KK + E
Sbjct: 271 -ATITRD-ENGKSRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRAQKKHEREE 325
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 29/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A+R++ + Y+ N+D V++E +LF G VV+ + +D
Sbjct: 220 FVGHHIAKRDRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLFEPYGEVVSATITRDE-N 278
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F S E A A++ LN + +GK + V +A + +K
Sbjct: 279 GKSRGFGFVNFASHESAAKAVEELNDKEFHGKKLYVGRAQKKHEREEELRRQYEAARMEK 338
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL++ NL DVD+ L + FS++G I T+ K+MRD
Sbjct: 339 ASKYQGVNLYVKNLTDDVDDDKLRELFSSYGTI-TSAKVMRD 379
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 111/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS +G N+FI NLD +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GIG-NIFIKNLDDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA++ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DENGSRGFGFVHFETHEAANQAINTMNGMLLNDRKVFVGHF---KSRQEREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 97/175 (55%), Gaps = 11/175 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +G+GFV F + E A+ AI +N
Sbjct: 102 FIKNLDDSIDNKALYDTFSTFGNILSCKVVCDE--NGSRGFGFVHFETHEAANQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ N + D+D++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGHFKSRQEREAELGARALEFTNIYVKNFEGDMDDECLQELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+M D + G SRGFGF++++ E + A+ MNG+ L R + V A K+ +
Sbjct: 220 -VKVMVD-ENGQSRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYVGRAQKRSER 272
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N + + +E L ELF Q G ++V V D +G+GFV F E+A A+ +N
Sbjct: 194 YVKNFEGDMDDECLQELFSQFGKTLSVKVMVDE-NGQSRGFGFVNFEKHEEAQKAVSNMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A Q++ + G NL++ NLD +D++ L
Sbjct: 253 GKELGGRVLYVGRAQKRSERQSELKRRFEQMKQERVNRYQGVNLYVKNLDDIIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFIQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF+Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 28 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 87
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 88 TMNFDVMKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 145
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 146 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 199
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 119 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 176
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD+ L + FS FG ++
Sbjct: 177 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLS 236
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 237 -VKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 286
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V + L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 202 AKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHED 260
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 261 ANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 320
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 321 TIDDEKLRREFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 377
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 378 KPLYVALAQRKEER 391
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 51 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 110
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 111 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS-CK 169
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 170 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 220
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 142 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 200
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+DPDV E+ F FG I T
Sbjct: 201 GMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEI-T 259
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RDP+ G SRGFGF++Y + E++ AA++ M+ + + +++ V A KK + E R
Sbjct: 260 SATLSRDPE-GKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELR 318
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 319 KQYEAARLEKAS 330
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 71/237 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+DP VTEE ++F Q G + + + +D +G+GFV + + E A A+ ++
Sbjct: 235 YIKNIDPDVTEEEFRKIFEQFGEITSATLSRD-PEGKSRGFGFVNYSTHESAQAAVDEMH 293
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL DVD++ L +
Sbjct: 294 DKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRE 353
Query: 131 TFSAFGVIVTNPKIMRD---------PDT------------------------------- 150
F +G I T+ K+MRD PD+
Sbjct: 354 LFGPYGTI-TSAKVMRDSTPAERTETPDSEKEKEVNKENEKKEDEEKAAEEKPKESDEEK 412
Query: 151 ------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + S + + A+ MN + + + + V+ A +KD +
Sbjct: 413 KDETKKSDKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 469
>gi|401623525|gb|EJS41622.1| hsh49p [Saccharomyces arboricola H-6]
Length = 213
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 116/199 (58%), Gaps = 15/199 (7%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N T YVGN+DP++T+E L+ELF+Q P++ + PKD+V +QGY F+EF ++EDA Y
Sbjct: 6 NSGNTVYVGNIDPRITKEQLYELFIQINPILRIKYPKDKVLQTYQGYAFIEFYNKEDAQY 65
Query: 82 AIKVL-NMIKLYGKPIRVNKASQDKKSLDVGAN-----------LFIGNLDPDVDEKLLY 129
I ++ N +KLY + I+V + + + ++ +N LF+ NL VD L
Sbjct: 66 VILIMNNTVKLYDRLIKVRQVTNSVGTTNLSSNSSKDISLPIAKLFVKNLAESVDIDQLA 125
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ FG V P+I G + ++ ++ FE +D AI+++N Q + N ++TV YA
Sbjct: 126 KIFNKFGKTVNKPEIFH-LSNGKLKC-AYVYFEDFEKADMAIKSLNNQLVANNRVTVDYA 183
Query: 190 YKKDTKGE-RHGTPAERIL 207
+K+ KG ++G +R+L
Sbjct: 184 FKESGKGNIKYGGEVDRLL 202
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D +T GY +V + S D + A++
Sbjct: 65 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALE 124
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 125 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 183
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +N L +++ V Y KKD
Sbjct: 184 VAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKD 233
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 156 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIKHVN 214
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ + ++ D F+ +G VT
Sbjct: 215 NMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYG-DVT 273
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + E + A+E +NG+ + + V A KK + E R
Sbjct: 274 SSSLARDSE-GKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELR 332
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 333 KSYEAARLEKAN 344
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 63/229 (27%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ + T+E +LF + G V + + +D +G+GFV F + E A A++ LN
Sbjct: 249 YVKNISLEATDEEFRDLFAKYGDVTSSSLARDS-EGKSRGFGFVNFTTHECAAKAVEELN 307
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+ G+ + V +A + +KS + G NL+I NL D+D+ L
Sbjct: 308 GKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQ 367
Query: 131 TFSAFGVIVTNPKIMRDPDT---------------------------------------- 150
FS +G I T+ K+MRD T
Sbjct: 368 MFSEYGPI-TSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKKTEKKG 426
Query: 151 ----GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 427 DRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALAQRKDVR 475
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +++ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAE 182
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V + + ++ ++GA N++I N D+D++ L +TFS +G +
Sbjct: 159 NGMLLNDRKVFVGRFKCRREREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M DP +G S+GFGF+S++ E ++ A++ MNG+ + + + V A KK
Sbjct: 219 S-VKVMTDP-SGKSKGFGFVSFERHEDANKAVDDMNGKDVNGKIMFVGRAQKK 269
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L E F + G ++V V D + +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTD-PSGKSKGFGFVSFERHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A+ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVDDMNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 117/204 (57%), Gaps = 7/204 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD--TKGERHG 200
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD +K +
Sbjct: 180 VAQD-ENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMK 238
Query: 201 TPAERILAAN-NPSSQKSRPHTLF 223
I N NP TLF
Sbjct: 239 ANFTNIYVKNINPEVTDDEFRTLF 262
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 152 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAASQAIKHVN 210
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N++P+V + F +G VT
Sbjct: 211 GMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYG-DVT 269
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ + RD +TG SRGFGF+++ S E + A++ +N + + + V A KK + E
Sbjct: 270 SSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEE 327
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 77/140 (55%), Gaps = 18/140 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++P+VT++ LF + G V + + +D+ T +G+GFV F S EDA A++ LN
Sbjct: 245 YVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELN 304
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ +G+ + V +A Q+K S G NL+I NLD +VD++ L
Sbjct: 305 EKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQ 364
Query: 131 TFSAFGVIVTNPKIMRDPDT 150
FS FG I T+ K+MRD T
Sbjct: 365 LFSEFGPI-TSAKVMRDSIT 383
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
Q A + Q Y+ NLD +V +E L +LF + GP+ + V +D +T
Sbjct: 337 QEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSIT 383
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L D FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKK 269
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L +LF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 60 ASLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 119
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 120 ELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 178
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 179 VAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD 228
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 12/195 (6%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK
Sbjct: 148 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIK 206
Query: 85 VLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGV 137
+N + L K + V K + K ++ AN +++ N+ P+ E F +G
Sbjct: 207 HVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNISPEATEDDFRQLFEQYG- 265
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
VT+ + RD + G SRGFGF+++ + E++ A++ +NG+ + + V A KK + E
Sbjct: 266 DVTSSSLARDQE-GKSRGFGFVNFTTHESAAKAVDELNGKDFRGQDLYVGRAQKKHEREE 324
Query: 198 --RHGTPAERILAAN 210
R A R+ AN
Sbjct: 325 ELRKSYEAARLEKAN 339
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 65/233 (27%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N+ P+ TE+ +LF Q G V + + +D+ +G+GFV F + E A A+
Sbjct: 242 NVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQ-EGKSRGFGFVNFTTHESAAKAVDE 300
Query: 86 LNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLL 128
LN G+ + V +A + +KS + G NL+I NLD DVD+ L
Sbjct: 301 LNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDKL 360
Query: 129 YDTFSAFGVIVTNPKIMRDP---------------------------------------- 148
FS FG I T+ K+MRD
Sbjct: 361 RQMFSEFGPI-TSAKVMRDTPVENEDEKPAEEKKEEQEDKDKENKPEETKEGEEGAEKKA 419
Query: 149 ------DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + N+ + V+ A +KD +
Sbjct: 420 EKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVSNKPLYVALAQRKDVR 472
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VT+ L++LF Q G VV+V V +D + GYG+V + + +DA A++
Sbjct: 25 TSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALE 84
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN L G PIRV + +D GA N+FI NLD +D K L+DTFSAFG I++ K
Sbjct: 85 MLNFTPLNGSPIRVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILS-CK 143
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ DP +G S+G+GF+ +DS EA+ AIE +NG L ++Q+ V
Sbjct: 144 VATDP-SGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYV 185
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 101/190 (53%), Gaps = 22/190 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V NL TEE L + F + G + ++ V +D + +GFV F + EDA A++ L
Sbjct: 206 VFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDG-DGKSKCFGFVNFENAEDAAKAVEAL 264
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNLDPDVDEKLL 128
N K+ K V KA Q K +V GANL+I NLD + ++ L
Sbjct: 265 NGKKIDDKEWFVGKA-QKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDEKL 323
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+ + ++ + V+
Sbjct: 324 KELFSPFGTI-TSCKVMRDPN-GISRGSGFVAFSTPEEASRALLEMNGKIVVSKPLYVAL 381
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 382 AQRKEDRRAR 391
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 158/365 (43%), Gaps = 44/365 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V D + +GYGFV+F SEE A AI+ LN
Sbjct: 116 FIKNLDKAIDHKALHDTFSAFGNILSCKVATDP-SGQSKGYGFVQFDSEEAAQKAIEKLN 174
Query: 88 MIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+ L K + V + DK + N+F+ NL E+ L TF FG I
Sbjct: 175 GMLLNDKQVYVGPFLRKQERDTATDKMRFN---NVFVKNLSETTTEEDLNKTFGEFGTI- 230
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
T+ +MRD D G S+ FGF+++++ E + A+EA+NG+ + +++ V A KK ER
Sbjct: 231 TSIVVMRDGD-GKSKCFGFVNFENAEDAAKAVEALNGKKIDDKEWFVGKAQKK---YERE 286
Query: 200 GTPAERILAANNPSSQKSRPHTLF------ASGPPSLQNAPQANGTV-GGPVPPRPYANG 252
+R + ++ K + L+ + G L+ GT+ V P
Sbjct: 287 VELKQRFEQSMKEAADKFQGANLYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGIS 346
Query: 253 AASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPPPNM 312
SG ++ P+ A+ +++ G+ +P ++ + +Q +
Sbjct: 347 RGSGFVAF-----STPEEASRALLEMNGKIVV-SKPLYVALAQRKEDRRARLQAQFSQMR 400
Query: 313 PPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPP---------QQLL-----GRPPMP 358
P P + M PP G+G Q + PP QQL+ G PMP
Sbjct: 401 PVAMAPSVGPRMPMYPPAGPGLGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMP 460
Query: 359 HMSMP 363
+ +P
Sbjct: 461 NFFVP 465
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 106 KSLDVGAN--------LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFG 157
+S++ GAN L++G+L+ V + LYD F+ G +V+ ++ RD + S G+G
Sbjct: 11 QSVNAGANNPNFVTTSLYVGDLEASVTDSQLYDLFNQVGQVVS-VRVCRDLTSRRSLGYG 69
Query: 158 FISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
+++Y + + + A+E +N L I V Y+++
Sbjct: 70 YVNYSNPQDAARALEMLNFTPLNGSPIRVMYSHR 103
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q A Y+ NLD + +E L ELF G + + V +D + +G GFV F +
Sbjct: 298 KEAADKFQGANLYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDP-NGISRGSGFVAFST 356
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ V A +D+++
Sbjct: 357 PEEASRALLEMNGKIVVSKPLYVALAQRKEDRRA 390
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP+ G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDPN-GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 12 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 71
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 72 TMNFDVVKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 129
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 130 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 183
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 103 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 160
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 161 GMLLNDRKVFVGRFKSRKEREAEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLS 220
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M DP TG SRGFGF+SY+ E ++ A+E MNG L + + V A KK
Sbjct: 221 -VKVMTDP-TGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKK 270
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + ++ L ELF + G ++V V D T +G+GFV + ED
Sbjct: 186 AKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTD-PTGKSRGFGFVSYEKHED 244
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N +L GK + V +A Q++ S G NL+I NLD
Sbjct: 245 ANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 304
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 305 TIDDEKLRKEFSPFGSI-TSAKVM--LEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 361
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 362 KPLYVALAQRKEER 375
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S ED + A++
Sbjct: 48 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 107
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 108 ELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILS-CK 166
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L +++ V +
Sbjct: 167 VAQD-ELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGH 210
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + N +GYGFV + + E A+ AIK +N
Sbjct: 139 FIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGN-SKGYGFVHYETAEAANNAIKHVN 197
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D DV ++ + F G
Sbjct: 198 GMLLNEKKVFVGHHIPKKERMSKFEEMKANF---TNIYVKNIDLDVTDEDFRELFEKHGD 254
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ I RD D G SRGFGF++Y EA+ A++ +N +++ V A KK + E
Sbjct: 255 I-TSASIARD-DQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREE 312
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 69/236 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D VT+E ELF + G + + + +D +G+GFV + E A A+ LN
Sbjct: 232 YVKNIDLDVTDEDFRELFEKHGDITSASIARDD-QGKSRGFGFVNYIRHEAAAVAVDHLN 290
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
I+ G+ + V +A + +K+S G NL+I NL+ DVD++ L D
Sbjct: 291 DIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRD 350
Query: 131 TFSAFGVIVTNPKIMRD------------------------------------PDT---- 150
F+ FG I + I+RD DT
Sbjct: 351 MFTPFGTITSAKVILRDEEKKDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGD 410
Query: 151 -----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 411 KVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVR 466
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 60 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 119
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 120 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 178
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 179 VAQD-ENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKD 228
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 151 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAHQAIKHVN 209
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ + + + F +G I T
Sbjct: 210 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNIYVKNISTEASDDEFRELFEKYGDI-T 268
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + E++ A+E ++G+ + + V A KK + E R
Sbjct: 269 SSSLARDQE-GKSRGFGFVNFTTHESAAKAVEELHGKDFRGQDLYVGRAQKKHEREEELR 327
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 328 KSYEAARLEKAN 339
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ + +++ ELF + G + + + +D+ +G+GFV F + E A A++ L+
Sbjct: 244 YVKNISTEASDDEFRELFEKYGDITSSSLARDQ-EGKSRGFGFVNFTTHESAAKAVEELH 302
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +KS + G NL+I NLD DVD++ L
Sbjct: 303 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDEKLRQ 362
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 363 MFAEFGPI-TSAKVMRD 378
>gi|349581469|dbj|GAA26627.1| K7_Hsh49p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 213
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 117/195 (60%), Gaps = 15/195 (7%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGN+DP++T+E L+ELF+Q PV+ + PKD+V +QGY F+EF ++ DA YAIK+
Sbjct: 10 TVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKI 69
Query: 86 L-NMIKLYGKPIRVNKASQDKKSLDV-----------GANLFIGNLDPDVDEKLLYDTFS 133
+ N ++LY + I+V + + + ++ A LFI N+ +D L F+
Sbjct: 70 MNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNVADSIDSDQLVKIFN 129
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG ++ P+I G + ++ ++ FE +D AI+++N Q + N +ITV YA+K++
Sbjct: 130 KFGKLIREPEIFY-LSNGKLKC-AYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKEN 187
Query: 194 TKGE-RHGTPAERIL 207
KG ++G +R+L
Sbjct: 188 GKGNAKYGDDVDRLL 202
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 10/197 (5%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ Y GN+ QVTE LL E+F GP+ + + KD+ + YGFV + A AI
Sbjct: 64 SVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSS-----YGFVHYFDRRCASMAIM 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN ++G+P++VN A + D + N+F+G+L P+V + L+D+FSAF ++
Sbjct: 119 TLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNS-CSDA 177
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGT 201
++M D TG SRGFGF+S+ + + + AI MNG+++ +RQI ++A K T GE +H +
Sbjct: 178 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSS 237
Query: 202 PAERILAANNPSSQKSR 218
+ ++ N SS+ R
Sbjct: 238 DGKSVVELTNGSSEDGR 254
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 42/200 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ L++ F + V D+ T +G+GFV FR+++DA AI +N
Sbjct: 151 FVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 210
Query: 88 MIKLYGKPIRVNKAS------QDKKSLDVGA----------------------------N 113
+ + IR N A+ +DK S D +
Sbjct: 211 GKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFTT 270
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GNL P+V + L+ F G ++ ++ RD +GFGF+ Y++ + + AI+
Sbjct: 271 VYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRD------KGFGFVRYNTHDEAALAIQ 324
Query: 173 AMNGQ-YLCNRQITVSYAYK 191
N Q +L +RQI S+ K
Sbjct: 325 MGNAQPFLFSRQIRCSWGNK 344
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Q T YVGNL P+VT+ L LF + AG + V V +D+ G+GFV + + ++A
Sbjct: 267 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDK------GFGFVRYNTHDEAA 320
Query: 81 YAIKVLNMI-KLYGKPIRVN 99
AI++ N L+ + IR +
Sbjct: 321 LAIQMGNAQPFLFSRQIRCS 340
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 180 VAQD-ENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKD 229
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 152 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAHQAIKHVN 210
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN ++I N+ + + + F +G I T
Sbjct: 211 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNIYIKNISTEASDDEFRELFEKYGDI-T 269
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + E++ A+E ++G+ + + V A KK + E R
Sbjct: 270 SSSLARDQE-GKSRGFGFVNFTTHESAAKAVEELHGKDFRGQDLYVGRAQKKHEREEELR 328
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 329 KSYEAARLEKAN 340
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+ + +++ ELF + G + + + +D+ +G+GFV F + E A A++ L+
Sbjct: 245 YIKNISTEASDDEFRELFEKYGDITSSSLARDQ-EGKSRGFGFVNFTTHESAAKAVEELH 303
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +KS + G NL+I NLD DVD++ L
Sbjct: 304 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDEKLRQ 363
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 364 MFAEFGPI-TSAKVMRD 379
>gi|321261800|ref|XP_003195619.1| polyadenylate-binding protein [Cryptococcus gattii WM276]
gi|317462093|gb|ADV23832.1| polyadenylate-binding protein, putative [Cryptococcus gattii WM276]
Length = 675
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 48 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 107
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 108 HLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILS-CK 166
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G SRGF F+ Y + EA+DAAI+A+NG L ++++ V + K +
Sbjct: 167 VGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKER 217
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 30/228 (13%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q Y+ N+D +VT+ +L GP ++V + +D + +G+GFV + + E A
Sbjct: 225 RAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDE-QGVSKGFGFVNYENHESAK 283
Query: 81 YAIKVLNMIKLYGKPIRVNKA------------SQDKKSLD-----VGANLFIGNLDPDV 123
A+ LN ++ GK + +A S ++K ++ G NL+I NLD +
Sbjct: 284 QAVDELNEKEINGKKLYAGRAQTKSEREAELKKSHEEKRIENEAKSAGVNLYIKNLDDEW 343
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F AFG I T+ K+MRD D+G SRGFGF+ Y S + + A+ MNG+ + +
Sbjct: 344 DDDRLRAEFEAFGTI-TSSKVMRD-DSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKP 401
Query: 184 ITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
+ V+ A +KD R A + +Q+++ + +G P +Q
Sbjct: 402 LYVALAQRKDV----------RRQALESQIAQRAQQRMQYGAGFPGMQ 439
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V A+L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + +
Sbjct: 46 VSASLYVGELDPSVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGER 104
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A+E +N + + + ++ +
Sbjct: 105 ALEHLNYSLIKGQSCRIMWSQR 126
>gi|313218343|emb|CBY41581.1| unnamed protein product [Oikopleura dioica]
Length = 613
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 114/177 (64%), Gaps = 10/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+ TE +L++ F QAGPV+++ V +D +T GY +V F+ EDA+ AI
Sbjct: 11 ASLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQRPEDAERAID 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N +L GK IR+ + +D +KS VG N+FI NLD +D K+LYDTFSAFG I++
Sbjct: 71 TMNFDELKGKAIRIMWSQRDPALRKS-GVG-NIFIKNLDKTIDNKMLYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ G S+G+GF+ +++ EA+ AIE ++G + ++++ V + ++GER
Sbjct: 129 K--VNVNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVG---RFKSRGER 180
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 21/192 (10%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q ++ NL + + L E+F + G V++V + D Q +GFV F + E A+
Sbjct: 190 QFTNVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQ-FGFVSFETHECAEKV 248
Query: 83 IKVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDE 125
++ L+ + GK I R K ++ + L V G NL++ NLD + +
Sbjct: 249 VEKLHDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVKNLDDSITD 308
Query: 126 KLLYDTFSAFGVIVTNPKIMRDPDTGNSR--GFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
+L + F+ +G I T+ K+M D D +R GFGF+ + S E + A+ MNG+ + ++
Sbjct: 309 DILREHFAPYGNI-TSSKVMTDTDVEGTRSKGFGFVCFTSAEEATKAVTEMNGRIIASKP 367
Query: 184 ITVSYAYKKDTK 195
+ V+ A +KD +
Sbjct: 368 LYVALAQRKDER 379
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALE 123
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 124 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 182
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 183 VAQD-ENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 232
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 155 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAASQAIKHVN 213
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN ++I N+ +V + D F+ FG VT
Sbjct: 214 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNIYIKNISGEVTDDEFRDLFTPFG-DVT 272
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + EA+ A++ +NG+ + + V A KK + E R
Sbjct: 273 SSSLARDQE-GKSRGFGFVNFTTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELR 331
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 332 KSYEAARMEKAN 343
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 70/236 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+ +VT++ +LF G V + + +D+ +G+GFV F + E A A+ LN
Sbjct: 248 YIKNISGEVTDDEFRDLFTPFGDVTSSSLARDQ-EGKSRGFGFVNFTTHEAAAKAVDDLN 306
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +KS + G NL+I NLD DVD++ L
Sbjct: 307 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKANKYQGVNLYIKNLDDDVDDEKLRQ 366
Query: 131 TFSAFGVIVTNPKIMRD--PDTGN------------------------------------ 152
F+ FG I T+ K+MRD D+GN
Sbjct: 367 LFADFGPI-TSAKVMRDNATDSGNEDEGSSEEKETEAKKDEEEEEKPEEAKTDDKEDADK 425
Query: 153 -------------SRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 426 KSDKKSDKKLHGKSKGFGFVCFSNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVR 481
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFS-AFGVIV 139
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F A V
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGPALSV-- 217
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 218 ---KVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 24/186 (12%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLF---GPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 248
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 249 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 308
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 309 KEFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 365
Query: 190 YKKDTK 195
+K+ +
Sbjct: 366 QRKEER 371
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 109/168 (64%), Gaps = 3/168 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++ +A+ YVG LDP VTE +L+E+F GPV +V V +D +T GY +V F ++ D
Sbjct: 41 DQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADG 100
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVI 138
A++ LN + +P R+ + +D GA N++I NLDP +D K L+DTFSAFG I
Sbjct: 101 IRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQI 160
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
++ KI D + GNSRGFGF+ Y+S E++++AI+ +NG L ++++ V
Sbjct: 161 LS-CKIATD-EFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFV 206
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 26/196 (13%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH---QGYGFVEFRSE 76
++N ++ NL ++TE EL + G +V++ TN G+GFV+++
Sbjct: 222 QKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLS----TNDEGKPTGFGFVDYKEH 277
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNL 119
+ A AI L+ + G + +A + + D G NL+I NL
Sbjct: 278 DVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNL 337
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D +D+ L F+ G I T+ K+M D + G S+GFGF+ Y S E + A+ MN + +
Sbjct: 338 DDTIDDDKLRAEFAPHGTI-TSAKVMVD-EAGKSKGFGFVCYSSPEEATKAVTEMNHRLV 395
Query: 180 CNRQITVSYAYKKDTK 195
+ + V A +KD +
Sbjct: 396 AGKPLYVVLAQRKDVR 411
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|405122394|gb|AFR97161.1| polyadenylate-binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 670
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 48 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 107
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 108 HLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILS-CK 166
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G SRGF F+ Y + EA+DAAI+A+NG L ++++ V + K +
Sbjct: 167 VGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKER 217
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 115/228 (50%), Gaps = 30/228 (13%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q Y+ N+D +VT+ +L GP ++V + +D + +G+GFV + E A
Sbjct: 225 RAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDE-KGVSKGFGFVNYEHHESAR 283
Query: 81 YAIKVLNMIKLYGKPIRVNKA------------SQDKKSLD-----VGANLFIGNLDPDV 123
A+ LN ++ GK + +A S ++K L+ G NL+I NLD +
Sbjct: 284 KAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYIKNLDDEW 343
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F AFG I T+ K+MRD D+G SRGFGF+ Y S + + A+ MNG+ + +
Sbjct: 344 DDDRLRAEFEAFGTI-TSSKVMRD-DSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKP 401
Query: 184 ITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
+ V+ A +KD R A + +Q+++ + +G P +Q
Sbjct: 402 LYVALAQRKDV----------RRQALESQIAQRAQQRMQYGTGFPGMQ 439
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V A+L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + +
Sbjct: 46 VSASLYVGELDPSVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGER 104
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A+E +N + + + ++ +
Sbjct: 105 ALEHLNYSLIKGQSCRIMWSQR 126
>gi|213403408|ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212000523|gb|EEB06183.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 662
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 107/167 (64%), Gaps = 3/167 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
++ + YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + +D + A
Sbjct: 77 KNTSLYVGELDPSVTEAMLFEIFSTVGPVASIRVCRDAVTRQSLGYAYVNYHNADDGEKA 136
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
++ LN + G+ R+ + +D G N+FI NLDP +D K L+DTFSAFG I++
Sbjct: 137 LEELNYSLIKGRACRIMWSQRDPSLRKTGTGNIFIKNLDPAIDNKALHDTFSAFGTILS- 195
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
K+ D + GNS+G+GF+ + S ++++AAIE +NG L ++++ V +
Sbjct: 196 CKVALD-EYGNSKGYGFVHFASIDSANAAIEHVNGMLLNDKKVYVGH 241
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 30/209 (14%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G H + R++ + Y+ N+DP+VT+E LF + G + + + KD +
Sbjct: 239 VGHHVSRRDRQSKFEAMKANFTNVYIKNIDPEVTDEEFSGLFEKFGAITSFSLVKDE-SG 297
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKK 106
+G+GFV F S E A A+ +N + +GK + V +A + +K
Sbjct: 298 KPRGFGFVNFESHEAAQKAVDEMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKM 357
Query: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
S G NLFI NL +VD+ LL FSAFG I T+ K+M D + G S+GFGF+ Y S E
Sbjct: 358 SKYQGVNLFIKNLSDEVDDNLLKTEFSAFGTI-TSAKVMTD-ENGKSKGFGFVCYSSPEE 415
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ AI MN + L + + V+ A +KD +
Sbjct: 416 ATKAIAEMNQRMLAGKPLYVALAQRKDVR 444
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G LDP V E +L++ FS G V + ++ RD T S G+ +++Y + + + A+E
Sbjct: 80 SLYVGELDPSVTEAMLFEIFSTVGP-VASIRVCRDAVTRQSLGYAYVNYHNADDGEKALE 138
Query: 173 AMNGQYLCNRQITVSYA 189
+N + R + ++
Sbjct: 139 ELNYSLIKGRACRIMWS 155
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A+
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALD 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 180 VAQD-EHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 229
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 9/178 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 152 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKHVN 210
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ DV + F FG VT
Sbjct: 211 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNIYVKNIQLDVTDDDFRALFEKFG-HVT 269
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ + RD +TG SRGFGF+++ S E + A+E +N + + + V A KK + E
Sbjct: 270 SSSLARDQETGKSRGFGFVNFTSHEDASKAVEELNEKEFHGQNLYVGRAQKKHEREEE 327
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 60/227 (26%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ VT++ LF + G V + + +D+ T +G+GFV F S EDA A++ LN
Sbjct: 245 YVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVEELN 304
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ +G+ + V +A Q+K S G NL+I NLD +VD+ L
Sbjct: 305 EKEFHGQNLYVGRAQKKHEREEELRRSYEAARQEKASKYQGVNLYIKNLDDEVDDDKLRQ 364
Query: 131 TFSAFGVIVTNPKIMRD------------------------------------------P 148
FS FG I T+ K+MR+ P
Sbjct: 365 LFSEFGPI-TSAKVMRETLAEGADEPEAKDAADAKENVKEDEEAAKTEGDEGDAKADKKP 423
Query: 149 DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 424 KLGKSKGFGFVCFGNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVR 470
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NIFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRG+GF+ +++ EA++ AI MNG L +R++ V + + +G
Sbjct: 129 KVVC---DENGSRGYGFVHFETHEAANRAIATMNGMLLNDRKVFVGNFKSRREREAEYGA 185
Query: 202 PA 203
A
Sbjct: 186 KA 187
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 21/198 (10%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
++ A+ + Y+ N +++ E L E F G ++V V D + +G+GFV F
Sbjct: 181 AEYGAKAMEFTNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGR-SKGFGFVNFE 239
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIG 117
+DA A++ +N ++ G+ + V +A Q++ S G NL++
Sbjct: 240 KHQDAQKAVEDMNGKEINGRMLYVGRAQKRMERQSELKRKFEQIKQERVSRYQGVNLYVK 299
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NLD +D++ L FS +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+
Sbjct: 300 NLDDGIDDERLRKEFSPYGTI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGR 356
Query: 178 YLCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 357 IVSTKPLYVALAQRKEER 374
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F + E A+ AI +N
Sbjct: 102 FIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGYGFVHFETHEAANRAIATMN 159
Query: 88 MIKLYGKPIRV-NKASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V N S+ ++ + GA N++I N ++ + L +TFS FG ++
Sbjct: 160 GMLLNDRKVFVGNFKSRREREAEYGAKAMEFTNVYIKNFGEEMSNERLQETFSIFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D + G S+GFGF++++ + + A+E MNG+ + R + V A K+
Sbjct: 220 -VKVMTD-NIGRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRMLYVGRAQKR 269
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V Y KKD
Sbjct: 178 VAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD 227
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 150 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIKHVN 208
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ PDV ++ F FG VT
Sbjct: 209 GMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNIAPDVTDEDFRQLFEKFG-DVT 267
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G +RGFGF+++ + EA+ A+E +NG+ + + V A KK + E R
Sbjct: 268 SSSLARDQE-GKTRGFGFVNFTTHEAAFKAVEELNGKDFRGQDLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 327 KSYEAARLEKAN 338
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 60/226 (26%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ P VT+E +LF + G V + + +D+ +G+GFV F + E A A++ LN
Sbjct: 243 YVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQ-EGKTRGFGFVNFTTHEAAFKAVEELN 301
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +KS + G NL+I NLD DVD++ L
Sbjct: 302 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDEKLRQ 361
Query: 131 TFSAFGVIVTNPKIMRD-----------------------------------------PD 149
F+ FG I T+ K+MRD
Sbjct: 362 MFAEFGPI-TSAKVMRDVPQEGEEEAKDQEKDKENQKEGEKEGESAEGAEKKTEKKSDKK 420
Query: 150 TGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + N+ + V+ A +KD +
Sbjct: 421 LGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVR 466
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L+E F AGPV+++ V +D +T GY +V F DA+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKEIFDKYGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M DP +G SRGFGF+SY+ E ++ A+E MNG L + + V A KK
Sbjct: 220 -VKVMTDP-SGKSRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKK 269
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L E+F + G ++V V D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTD-PSGKSRGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N +L GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LD VTE +L+ELF Q GPV ++ V +D VT GY +V + S D + A++
Sbjct: 59 ASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDAAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 178 VAQD-EHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKD 227
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 9/178 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 150 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAAQQAIKHVN 208
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN ++I NL DV + F +G VT
Sbjct: 209 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANYTNIYIKNLHADVTDDEFRKLFEQYGA-VT 267
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ I RD +TG SRGFGFI++ + E++ A+E +N + + +++ V A KK + E
Sbjct: 268 SSTIARDQETGKSRGFGFINFTTHESAAKAVEELNSREIHGQELYVGRAQKKHEREEE 325
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 67/234 (28%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NL VT++ +LF Q G V + + +D+ T +G+GF+ F + E A A++ LN
Sbjct: 243 YIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKAVEELN 302
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+++G+ + V +A Q+K S VG NL+I NLD +VD++ L +
Sbjct: 303 SREIHGQELYVGRAQKKHEREEELRKSYEAARQEKASKYVGVNLYIKNLDDEVDDEKLRE 362
Query: 131 TFSAFGVIVTNPKIMRD------------------------------------------- 147
F+ +G I T+ K+MR+
Sbjct: 363 LFAPYGPI-TSAKVMRETASESDEEGKETKETEEVKEVKEEEEKPKVEGAAEGEADASGE 421
Query: 148 ------PDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
P G S+GFGF+ + + + + A+ MN + + + + V+ A KK+ +
Sbjct: 422 KQAAARPKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVSGKPLYVAIAQKKEVR 475
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 62 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTTDGEKALE 121
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 122 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 180
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D ++G S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 181 VAQD-ESGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKD 230
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + +GYGFV + ++E A AIK +N
Sbjct: 153 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDE-SGASKGYGFVHYETDEAASQAIKHVN 211
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ + ++ + F FG VT
Sbjct: 212 GMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATDEEFRELFEKFG-DVT 270
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD DTG SRGFGF+++ + E + A++ +NG+ + + V A KK + E R
Sbjct: 271 SASLARDQDTGKSRGFGFVNFINHEHAATAVDELNGKDFKGQDLYVGRAQKKHEREEELR 330
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 331 KSYEAARIEKAS 342
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 67/267 (25%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ + T+E ELF + G V + + +D+ T +G+GFV F + E A A+ LN
Sbjct: 246 YVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATAVDELN 305
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K S G NL++ NLD DVD++ L +
Sbjct: 306 GKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDDEKLRE 365
Query: 131 TFSAFGVIVTNPKIMRDP------------------------------------------ 148
F+ FG I T+ K+MRD
Sbjct: 366 LFTPFGAI-TSAKVMRDSAAETAEAEKKEEEKNKENKKEGDAEEGEKADGEKKEAPKSEK 424
Query: 149 -DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERIL 207
G S+GFGF+ + + + + AI MN + + + V+ A +KD R G I
Sbjct: 425 RTVGKSKGFGFVCFSNPDEATKAIADMNQNMVNGKPLYVALAQRKDV---RKGQLEASIQ 481
Query: 208 AANNPSSQKSRPHTLFASGPPSLQNAP 234
A N Q++ A PP AP
Sbjct: 482 ARNQIRMQQAAAQ---AGMPPQYMQAP 505
>gi|392574075|gb|EIW67212.1| hypothetical protein TREMEDRAFT_40410 [Tremella mesenterica DSM
1558]
Length = 666
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 40 ASLYVGELDPSVTEAMLFEIFNIIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 99
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 100 HLNYSAIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDESIDNKALHDTFAAFGEILS-CK 158
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D D G SRGF F+ Y + EA+DAAI+ ++G L ++++ V + K +
Sbjct: 159 VGVDED-GKSRGFAFVHYQTGEAADAAIKGVDGMMLNDKKVFVGHHIGKKER 209
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 103/193 (53%), Gaps = 20/193 (10%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+R +V N+D VTE+ +L + G V++ + D +G+GFV + S E A
Sbjct: 216 QRAHFTNVFVKNVDLSVTEKEFEDLVSKFGETVSIALSLDE-EGKSKGFGFVNYVSHEAA 274
Query: 80 DYAIKVLNMIKLYGKPI-------RVNKASQDKKSLD----------VGANLFIGNLDPD 122
+ A+ LN ++ G+ + RV + ++ +K+++ G NL++ NLD +
Sbjct: 275 EKAVDELNDKEVNGQKLWAGRAQKRVERDTELRKTIEEKRQEFDAKSAGVNLYVKNLDDE 334
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
D+ L F +FG I T+ K+M+D + G SR FGF+ Y S E + A+ MNG+ + ++
Sbjct: 335 WDDDRLRAEFDSFGTI-TSCKVMKD-ERGVSRNFGFVCYSSPEEATKAVSEMNGKMIGSK 392
Query: 183 QITVSYAYKKDTK 195
+ V+ A +++ +
Sbjct: 393 PLYVALAQRREAR 405
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
GA+L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + +
Sbjct: 38 TGASLYVGELDPSVTEAMLFEIFNIIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGER 96
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A+E +N + R + ++ +
Sbjct: 97 ALEHLNYSAIKGRPCRIMWSQR 118
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S D + A++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALE 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDGAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ D + GNS+G+GF+ Y++ EA+ AI+++NG L +++ V + KKD
Sbjct: 180 VAVD-ELGNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVFVGHHIPKKD 229
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V D + N +GYGFV + + E A AIK +N
Sbjct: 152 FIKNLDGAIDNKALHDTFAAFGNILSCKVAVDELGN-SKGYGFVHYETAEAASQAIKSVN 210
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N++ +V + + F +G
Sbjct: 211 GMLLNEKKVFVGHHIPKKDRMSKFEEMKANF---TNIYVKNIETEVTDDEFRELFEKYGE 267
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ + D +TG SRGFGF++Y + E + A++ +N +++ V A KK E
Sbjct: 268 I-TSASLAHDNETGKSRGFGFVNYINHEDAYKAVDELNDSDFHGQKLYVGRAQKKH---E 323
Query: 198 RHGTPAERILAANNPSSQKSRPHTLF 223
R ++ AA S K + L+
Sbjct: 324 REEELRKQYEAARQEKSAKYQGVNLY 349
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 18/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ +VT++ ELF + G + + + D T +G+GFV + + EDA A+ LN
Sbjct: 245 YVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINHEDAYKAVDELN 304
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+G+ + V +A Q+K + G NL++ NL +VD++ L
Sbjct: 305 DSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYQGVNLYVKNLADEVDDEELRK 364
Query: 131 TFSAFGVIVTNPKIMRD 147
F A+G I T+ K+MRD
Sbjct: 365 IFEAYGAI-TSAKVMRD 380
>gi|310798668|gb|EFQ33561.1| 4 family polyadenylate binding protein [Glomerella graminicola
M1.001]
Length = 768
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALE 123
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 124 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 182
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 183 VAQD-EHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 232
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK +N
Sbjct: 155 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKHVN 213
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ +V + D F+AFG VT
Sbjct: 214 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNIYVKNIANEVTDDEFRDLFTAFG-DVT 272
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + EA+ A++ +NG+ + + V A KK + E R
Sbjct: 273 SSSLARDQE-GKSRGFGFVNFTTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELR 331
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 332 KSYEAARMEKAS 343
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 69/235 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ +VT++ +LF G V + + +D+ +G+GFV F + E A A+ LN
Sbjct: 248 YVKNIANEVTDDEFRDLFTAFGDVTSSSLARDQ-EGKSRGFGFVNFTTHEAAAKAVDDLN 306
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K S G NL+I NLD +VD++ L
Sbjct: 307 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKASKYQGVNLYIKNLDDEVDDEKLRQ 366
Query: 131 TFSAFGVIVTNPKIMRDPDT---------------------------------------- 150
F+ FG I T+ K+MRD T
Sbjct: 367 LFADFGPI-TSAKVMRDNATESGNEDEGSSDDKENEPKKEEGEEKAEEAKSEDKEDADKK 425
Query: 151 ----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + + V+ A +KD +
Sbjct: 426 ADKKSDKKPHGKSKGFGFVCFSNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVR 480
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LD VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 56 ASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 115
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + + R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 116 QLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFGNVLS-CK 174
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G SRGFGF+ YD+ EA+D AI+A+NG L ++++ V + K +
Sbjct: 175 VATD-ENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHYISKKER 225
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+++Q YV NLD +VT++ ++F + G V + V KD +G+GFV F+ E A
Sbjct: 232 QKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDE-EGKSKGFGFVNFKDHESA 290
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPD 122
A+ L+ +L GK + V +A + +K S GANL+I NL+ D
Sbjct: 291 QAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLEDD 350
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
+D+ L F FG I T+ KIMRD + G S+GFGF+ Y S E + A+ MN + L ++
Sbjct: 351 MDDDKLRAEFEPFGTI-TSCKIMRD-EKGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSK 408
Query: 183 QITVSYAYKKDTKGERHGTPAERILAANNPSSQKS 217
+ VS A +++ R +I A NN Q++
Sbjct: 409 PLYVSPAQRREV---RRQQLESQIAARNNFRMQQA 440
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D +G+GFV + + E AD AIK +N
Sbjct: 147 FIKNLDEQIDHKALHDTFAAFGNVLSCKVATDE-NGRSRGFGFVHYDTAEAADTAIKAVN 205
Query: 88 MIKLYGKPIRV-NKASQDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + S+ ++ + NL++ NLD +V + D F+ FG VT
Sbjct: 206 GMLLNDKKVFVGHYISKKERQAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGE-VT 264
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + +D + G S+GFGF+++ E++ AA++A++ L +++ V+ A KK + E
Sbjct: 265 SAVVQKDEE-GKSKGFGFVNFKDHESAQAAVDALHDTELNGKKLFVTRAQKKAEREE 320
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 5/203 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ VT+ L+ELF QAG V++V V +D + GY +V F + DA A+++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GKPIRV +++D S G AN+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILS-CKV 158
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPA 203
D + G S+GFGF+ YD EA+ +AI+++NG + ++ + V + K++ + T
Sbjct: 159 ATD-EMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKF 217
Query: 204 ERILAAN-NPSSQKSRPHTLFAS 225
+ N + S+ K +F +
Sbjct: 218 NNVFVKNLSESTTKEDLVKIFGA 240
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 22/198 (11%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++S ++ + +V NL T+E L ++F G + + + + + +GF+ F+S
Sbjct: 209 ENSVDKTKFNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVG-MDGKSRCFGFINFKS 267
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIG 117
+DA A++ LN K+ K V +A Q K ++ G NL++
Sbjct: 268 PDDAARAVEELNGKKINDKEWYVGRA-QKKSEREIELKRRFEQSMKDAADKYQGLNLYMK 326
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NLD + + L + FS +G I T+ KIMRD + G S+G GF+++ + E + A+ MNG+
Sbjct: 327 NLDDSIGDDQLCELFSNYGKI-TSCKIMRDAN-GVSKGSGFVAFSTREEASQALTEMNGK 384
Query: 178 YLCNRQITVSYAYKKDTK 195
+ + + V++A +K+ +
Sbjct: 385 MISGKPLYVAFAQRKEDR 402
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V Y KKD
Sbjct: 178 VAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD 227
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
++ NLD + + L + F G +++ V +D N +GYGFV + ++E A AIK
Sbjct: 148 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIKH 206
Query: 86 LNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L K + V K + K ++ AN +++ N+ PDV + + F FG
Sbjct: 207 VNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNIGPDVTDDEFRELFEKFG-D 265
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE- 197
VT+ + RD + G RGFGF+++ + EA+ A+E +NG+ +++ V A KK + E
Sbjct: 266 VTSSSLARDQE-GKPRGFGFVNFTTHEAAFKAVEDLNGKDFRGQELYVGRAQKKHEREEE 324
Query: 198 -RHGTPAERILAAN 210
R A R+ AN
Sbjct: 325 LRKSYEAARLEKAN 338
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 60/228 (26%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N+ P VT++ ELF + G V + + +D+ +G+GFV F + E A A++
Sbjct: 241 NVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQ-EGKPRGFGFVNFTTHEAAFKAVED 299
Query: 86 LNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLL 128
LN G+ + V +A + +KS + G NL+I NLD DVD++ L
Sbjct: 300 LNGKDFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDEKL 359
Query: 129 YDTFSAFGVIVTNPKIMRDP---------------------------------------- 148
F+ FG I T+ K+MRD
Sbjct: 360 RQMFAEFGPI-TSAKVMRDTPQEGEEEVKDQEKDKENQKEAENEAESAESAEKKAEKKSD 418
Query: 149 -DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + N+ + V+ A +KD +
Sbjct: 419 KKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVR 466
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 5/203 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ VT+ L+ELF QAG V++V V +D + GY +V F + DA A+++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GKPIRV +++D S G AN+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILS-CKV 158
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPA 203
D + G S+GFGF+ YD EA+ +AI+++NG + ++ + V + K++ + T
Sbjct: 159 ATD-EMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKF 217
Query: 204 ERILAAN-NPSSQKSRPHTLFAS 225
+ N + S+ K +F +
Sbjct: 218 NNVFVKNLSESTTKEDLVKIFGA 240
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ R+ A ++ NLD + + L + F G +++ V D + +G+GFV++ E
Sbjct: 120 SSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQ-SKGFGFVQYDKGE 178
Query: 78 DADYAIKVLNMIKLYGKPIRVN---KASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTF 132
A AIK LN + + KP+ V + + + S+D N+F+ NL ++ L F
Sbjct: 179 AAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNNVFVKNLSESTTKEDLVKIF 238
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
A+G I T+ IM D G SR FGFI++ S + + A+E +NG+ + +++ V A KK
Sbjct: 239 GAYGNI-TSAVIMVGMD-GKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYVGRAQKK 296
Query: 193 DTK 195
+
Sbjct: 297 SER 299
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 24/198 (12%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++S ++ + +V NL T+E L ++F G + + + + + +GF+ F+S
Sbjct: 209 ENSVDKTKFNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVG-MDGKSRCFGFINFKS 267
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIG 117
+DA A++ LN K+ K V +A Q K ++ G NL++
Sbjct: 268 PDDAARAVEELNGKKINDKEWYVGRA-QKKSEREIELKRRFEQSMKDAADKYQGLNLYMK 326
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NLD + + L + FS +G I T+ KIMRD + G S+G GF+++ + + MNG+
Sbjct: 327 NLDDSIGDDQLCELFSNYGKI-TSCKIMRDAN-GVSKGSGFVAFSTLPF--IQLTEMNGK 382
Query: 178 YLCNRQITVSYAYKKDTK 195
+ + + V++A +K+ +
Sbjct: 383 MISGKPLYVAFAQRKEDR 400
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 121/203 (59%), Gaps = 5/203 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ VT+ L+ELF QAG V++V V +D + GY +V F + DA A+++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GKPIRV +++D S G AN+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILS-CKV 158
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPA 203
D + G S+GFGF+ YD EA+ +AI+++NG + ++ + V + K++ + T
Sbjct: 159 ATD-EMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKF 217
Query: 204 ERILAAN-NPSSQKSRPHTLFAS 225
+ N + S+ K +F +
Sbjct: 218 NNVFVKNLSESTTKEDLVKIFGA 240
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 102/198 (51%), Gaps = 22/198 (11%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++S ++ + +V NL T+E L ++F G + + + + + +GF+ F+S
Sbjct: 209 ENSVDKTKFNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVG-MDGKSRCFGFINFKS 267
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIG 117
+DA A++ LN K+ K V +A Q K ++ G NL++
Sbjct: 268 PDDAARAVEELNGKKINDKEWYVGRA-QKKSEREIELKRRFEQSMKDAADKYQGLNLYMK 326
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NLD + + L + FS +G I T+ KIMRD + G S+G GF+++ + E + A+ MNG+
Sbjct: 327 NLDDSIGDDQLCELFSNYGKI-TSCKIMRDAN-GVSKGSGFVAFSTREEASQALTEMNGK 384
Query: 178 YLCNRQITVSYAYKKDTK 195
+ + + V++A +K+ +
Sbjct: 385 MISGKPLYVAFAQRKEDR 402
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD VT+ L+++F Q G VV+V V +D T GYG+V + + +DA A+ V
Sbjct: 30 SLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 89
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GKPIRV + +D GA N+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 90 LNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGSILS-CKV 148
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPA 203
D +G S+G+GF+ +D+ E++ AIE +NG L ++Q+ V + K++ G +
Sbjct: 149 ALDS-SGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVVDKSKF 207
Query: 204 ERILAAN 210
+ N
Sbjct: 208 NNVFVKN 214
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 24/199 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++++ +V NL TEE L + F + G + ++ V +D + +GFV F + +D
Sbjct: 202 VDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRD-ADGKSRCFGFVNFENADD 260
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNLD 120
A A+ LN + K V KA Q K +V GANL+I NLD
Sbjct: 261 AARAVDTLNGKLVDDKEWYVGKA-QKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLD 319
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDS-FEASDAAIEAMNGQYL 179
+ + L + F+ FG I T+ K+MRDP+ G SRG GF+++ + EAS A +E MNG+ +
Sbjct: 320 DSIGDDKLKELFAPFGTI-TSCKVMRDPN-GISRGSGFVAFSTPDEASRALVE-MNGKMV 376
Query: 180 CNRQITVSYAYKKDTKGER 198
++ + V+ A +K+ + R
Sbjct: 377 VSKPLYVALAQRKEDRRAR 395
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+LD +V + LYD F+ G +V+ ++ RD T S G+G+++Y + + +
Sbjct: 27 VTTSLYVGDLDLNVTDSQLYDIFNQVGQVVS-VRVCRDLTTRRSLGYGYVNYSNPQDAAR 85
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A++ +N L + I V Y+++
Sbjct: 86 ALDVLNFTPLNGKPIRVMYSHR 107
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q A Y+ NLD + ++ L ELF G + + V +D + +G GFV F +
Sbjct: 302 KEAADKYQGANLYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDP-NGISRGSGFVAFST 360
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
++A A+ +N + KP+ V A +D+++
Sbjct: 361 PDEASRALVEMNGKMVVSKPLYVALAQRKEDRRA 394
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L+E F AGPV+++ V +D +T GY +V F DA+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 100/175 (57%), Gaps = 11/175 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+M DP TG SRGFGF+SY+ E ++ A+E MNG L + + V A KK+ +
Sbjct: 220 -VKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNER 272
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D T +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N +L GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L+E F AGPV+++ V +D +T GY +V F DA+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N ++ +E L E+F + G ++V V D + +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDS-SGKSRGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N +L GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEINGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 97/173 (56%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V + S+ ++ ++GA N++I N +++++ L + F +G +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDEMEDEQLKEMFEKYGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D +G SRGFGF+S++ E ++ A+E +NG L + + V A KK
Sbjct: 219 S-VKVMTDS-SGKSRGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKK 269
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 12/223 (5%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+P V+E L+ELF Q G VV++ V +D +T GY +V + S +DA A+++
Sbjct: 29 SLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRALEL 88
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L G PIR+ + +D G AN+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 89 LNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFGGILS-CKV 147
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAE 204
D +G S+G+GF+ ++ E++ AIE +NG L ++Q+ V ++ + + G
Sbjct: 148 AVD-GSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQSGGVSKF 206
Query: 205 RILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPR 247
+ N + L+N A GT+ V R
Sbjct: 207 NNVYVKNLGENTTE---------DDLKNVFGAYGTISSAVVMR 240
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL TE+ L +F G + + V +D + +GFV F ++A A++ L
Sbjct: 209 VYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDS-DGKSKCFGFVNFEHPDNAAKAVEAL 267
Query: 87 NMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLLY 129
N K K R K S+ + L G NL++ NLD VD++ L
Sbjct: 268 NGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKLR 327
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ +G I T+ K+MRDP G SRG GF+++ S E + A+ MNG+ + ++ + V+ A
Sbjct: 328 ELFADYGTI-TSCKVMRDPQ-GQSRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVALA 385
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 386 QRKEERRAR 394
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+L+P+V E LY+ F+ G +V+ ++ RD T S G+ +++Y+S + +
Sbjct: 26 VSTSLYVGDLEPNVSEAQLYELFTQVGQVVS-IRVCRDLITRRSLGYAYVNYNSAQDATR 84
Query: 170 AIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
A+E +N L I + +++ +D + GT I + K+ T A G
Sbjct: 85 ALELLNFSVLNGNPIRIMFSH-RDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFG 140
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ E+ Q Y+ NLD V +E L ELF G + + V +D +G GFV F S
Sbjct: 301 KERIEKYQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDP-QGQSRGSGFVAFSS 359
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 360 PEEATRAVTEMNGKMVGSKPLYVALAQRKEE 390
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 105/164 (64%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L+ VTE L+E F GPVV++ V +D +T GY +V F+S DA +AI
Sbjct: 37 SSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSPNDAAHAID 96
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
VLN + GKPIRV + +D + VG N+FI NLD +D K L DTF+ FG I T+
Sbjct: 97 VLNFQVINGKPIRVLYSQRDPAVRRSGVG-NIFIKNLDKAIDNKALLDTFAQFGTI-TSA 154
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D GNS+G+GF+ +++ EA+ AAI+ +NG L ++Q+ V
Sbjct: 155 KVAMDGQ-GNSKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYV 197
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F Q G + + V D N +GYGFV+F ++E A AI +N
Sbjct: 128 FIKNLDKAIDNKALLDTFAQFGTITSAKVAMDGQGN-SKGYGFVQFETQEAAQAAIDNVN 186
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGA----NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
++L K + V + + + G N+++ NL ++ ++ L + F+ G VT+
Sbjct: 187 GMELNDKQVYVGPFQRRAERSNTGEAKFNNVYVKNLSENLSDEKLREKFAEHGA-VTSCV 245
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
IMRD + G S+GFGF+ Y+ E + AA+E ++G + V A KK
Sbjct: 246 IMRDEE-GKSKGFGFVCYEEPEGAAAAVEKLDGYTEDEKTWVVCRAQKK 293
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 16 QHSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
Q AER+ A YV NL +++E L E F + G V + + +D +G+GF
Sbjct: 201 QRRAERSNTGEAKFNNVYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDE-EGKSKGFGF 259
Query: 71 VEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-------KKSLD----------VGAN 113
V + E A A++ L+ K V +A + K D GAN
Sbjct: 260 VCYEEPEGAAAAVEKLDGYTEDEKTWVVCRAQKKAEREAELKAKFDQERRERMEKMAGAN 319
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
L+I NL+ D++ L + F FG I T+ ++MRD +G SRG F+++ S + + A+
Sbjct: 320 LYIKNLEDGTDDEKLRELFKEFGTI-TSCRVMRDA-SGVSRGSAFVAFSSPDEATRAVTE 377
Query: 174 MNGQYLCNRQITVSYAYKKDTKGER 198
MNG+ + + + V+ A +K+ + R
Sbjct: 378 MNGKMVGAKPLYVALAQRKEERRMR 402
>gi|119627672|gb|EAX07267.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_g [Homo sapiens]
Length = 338
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 105/172 (61%), Gaps = 4/172 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKPIR+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
++ D G S+GFGF+ + S E + A+ MNG+ + ++ + V+ A +K+ +
Sbjct: 131 MLED---GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 179
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 100/177 (56%), Gaps = 11/177 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
K+M D D+G S+GFGF+S++ E + A++ MNG+ + + I V A K + + E
Sbjct: 220 -VKVMTD-DSGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAKKVERQTE 274
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A + Y+ N + +E L E+F + GP ++V V D + +G+GFV F ED
Sbjct: 185 ARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDD-SGKSKGFGFVSFERHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKAS----------------QDKKSLDVGANLFIGNLDPD 122
A A+ +N + GK I V +A QD+ + G NL++ NLD
Sbjct: 244 AQKAVDDMNGKDMNGKAIYVGRAKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDG 303
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISY 161
+D++ L FS FG I T+ K+M + G S+GFGF+ +
Sbjct: 304 IDDERLRKEFSPFGTI-TSAKVMM--EGGRSKGFGFVCF 339
>gi|148539604|ref|NP_001091917.1| polyA-binding protein [Strongylocentrotus purpuratus]
gi|126722149|emb|CAM57104.1| polyA-binding protein [Strongylocentrotus purpuratus]
Length = 640
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 7/166 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L VTE LL+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 12 SLYVGDLHADVTEALLFEKFSTAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 86 LNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N L G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 72 MNFDTLKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKAMYDTFSAFGHILS-C 128
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
K++ D + G ++G+GF+ +++ EA++ AIE +NG L +++ V Y
Sbjct: 129 KVVTD-ENGVNKGYGFVHFETQEAANKAIEKVNGMLLNGKKVYVGY 173
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 21/199 (10%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q + Q ++ NL V + L E Q G +++ + D + +G+GF+ F
Sbjct: 181 LMQMGDHQKQFTNVFIKNLAEDVDDGKLAEFGGQYGSILSAKIMFD--DSKSKGFGFISF 238
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFI 116
E A+ +K +N ++ G+ + +A Q++ + G NL+I
Sbjct: 239 EDHEAANDFVKTINGSEVNGRTLYAGRAQKKAERAAELKARFEALKQERSTRYQGVNLYI 298
Query: 117 GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
NLD ++D++ L FS +G I T+ K+M D D NS+GFGF+ + S E + A+ MNG
Sbjct: 299 KNLDDEIDDERLRKEFSRYGTI-TSAKVMSD-DKANSKGFGFVCFSSPEEATKAVTEMNG 356
Query: 177 QYLCNRQITVSYAYKKDTK 195
+ L + + V+ A +KD +
Sbjct: 357 RILVAKPLYVALAQRKDER 375
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+L DV E LL++ FS G I++ ++ RD T S G+ ++++ ++ A++
Sbjct: 12 SLYVGDLHADVTEALLFEKFSTAGPILS-IRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 173 AMNGQYLCNRQITVSYAYK 191
MN L R I + ++ +
Sbjct: 71 TMNFDTLKGRPIRIMWSQR 89
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V + S+ ++ ++GA N++I N D+D+ L + FS +G +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M DP +G S+GFGF+S++ E ++ A+E MNG+ + + + V A KK
Sbjct: 219 S-VKVMTDP-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + + L ELF + G ++V V D + +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I + ++ D G S+GFGF+ + S + + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSITSAKVMLED---GRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V + S+ ++ ++GA N++I N D+D+ L + FS +G +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M DP +G S+GFGF+S++ E ++ A+E MNG+ + + + V A KK
Sbjct: 219 S-VKVMTDP-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + + L ELF + G ++V V D + +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I + ++ D G S+GFGF+ + S + + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSITSAKVMLED---GRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AG +V++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGQPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D SRG+GF+ +++ +A++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F + + A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGYGFVHFETHDAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + FS FG T
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGN-AT 218
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ ++M D ++G RGFGF+S+++ E + A++ MNG+ L R + V A KK
Sbjct: 219 SVRVMTD-ESGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKK 269
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L E+F + G +V V D + +G+GFV F + EDA A+ +
Sbjct: 193 VYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDE-SGGGRGFGFVSFENHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGSI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ VT+ L++LF Q GPVV+V V +D T GYG+V + + +DA A+ +
Sbjct: 33 SLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAARALDM 92
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GKPIR+ + +D G AN+FI NLD +D K LYDTFS FG I++ KI
Sbjct: 93 LNFTPLNGKPIRIMYSFRDPSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAILS-CKI 151
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPA 203
D +G S+G+GF+ +D+ E++ A + +NG L ++Q+ V + K++ + + T
Sbjct: 152 ATDA-SGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRKQERESATNKTKF 210
Query: 204 ERILAAN 210
+ N
Sbjct: 211 NNVYVKN 217
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + + + YV NL T+E L +F + GP+ + V +D + +GFV F +
Sbjct: 202 ESATNKTKFNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDG-DGKSKCFGFVNFEN 260
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGN 118
+DA +++ LN K K V KA + K+++D G NL++ N
Sbjct: 261 ADDAARSVEALNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKN 320
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD + + L + FS FG I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+
Sbjct: 321 LDDSIADDKLRELFSEFGTI-TSCKVMRDPN-GISRGSGFVAFSTAEEASRALADMNGKM 378
Query: 179 LCNRQITVSYAYKKDTKGER 198
+ ++ + V+ A +K+ + R
Sbjct: 379 VASKPLYVALAQRKEDRRAR 398
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V + S+ ++ ++GA N++I N D+D++ L + FS +G +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D +G S+GFGF+S++ E ++ A+E MNG+ + + + V A KK
Sbjct: 219 S-VKVMTDS-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D + +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDS-SGKSKGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S + + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|405977322|gb|EKC41780.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 646
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 16 ASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 76 TMNFDTIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 133
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRG+GF+ +++ EA+ AIE +NG L +++ V + ++ ER
Sbjct: 134 KIVC---DEHGSRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVG---RFMSRRERLEV 187
Query: 202 PAERILAANN 211
+++ NN
Sbjct: 188 LGDKMRKFNN 197
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ + D + +GYGFV F +EE A AI+ +
Sbjct: 106 VFIKNLDKSIDNKALYDTFSAFGNILSCKIVCDE--HGSRGYGFVHFETEEAARIAIEKV 163
Query: 87 NMIKLYGKPIRVNKASQDKKSLDVGA-------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L GK + V + ++ L+V N+++ N +++++ L D F +G I+
Sbjct: 164 NGMLLNGKKVFVGRFMSRRERLEVLGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKII 223
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ K+M D +G +GFGF+S++ EA++ A+EA+NG + + V A KK +
Sbjct: 224 S-AKVMTDDGSGKGKGFGFVSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAEL 282
Query: 200 GTPAERI 206
ERI
Sbjct: 283 KEKFERI 289
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N ++ +E L ++F G +++ V D + +G+GFV F E A+ A++ L
Sbjct: 198 VYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFGFVSFEDPEAAEKAVEAL 257
Query: 87 NMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLY 129
N GK + V +A + K+ + G NL++ NLD ++D++ L
Sbjct: 258 NGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERINRYQGVNLYVKNLDDNIDDERLR 317
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 318 KEFAQFGTI-TSAKVM--TEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVVAKPLYVALA 374
Query: 190 YKK-DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
+K D K +RI + Q + +F
Sbjct: 375 QRKEDRKAHLASQYMQRITSMRMQGQQIGQVSQMF 409
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q YV NLD + +E L + F Q G + + V + +G+GFV F S E+A
Sbjct: 296 RYQGVNLYVKNLDDNIDDERLRKEFAQFGTITSAKVMTE--GGRSKGFGFVCFSSPEEAT 353
Query: 81 YAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
A+ +N + KP+ V A +D+K+
Sbjct: 354 KAVTEMNGRIVVAKPLYVALAQRKEDRKA 382
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LDP VT+ L++ F Q G VV+V V +D T GYG+V F S +DA AI+
Sbjct: 40 TSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQ 99
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN I L GKP+RV + +D GA N+FI NLD +D K L+DTFS FG I++ K
Sbjct: 100 ELNYIPLNGKPVRVMYSHRDPSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIIS-CK 158
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D +G S+G+GF+ Y++ E++ A+ +NG L ++Q+ V
Sbjct: 159 VAVDS-SGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYV 200
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL T++ L +F + G + + V KD +G+GFV F + +DA A++ L
Sbjct: 221 VYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDG-EGKPKGFGFVNFENADDAAKAVESL 279
Query: 87 NMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLLY 129
N K R K S+ + L V +NL++ NLD V ++ L
Sbjct: 280 NGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSNLYVKNLDDSVSDEKLK 339
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ +G VT+ K+MRDP+ G SRG GF+++ + E + A+ M+G+ + N+ + V+ A
Sbjct: 340 ELFTPYGT-VTSCKVMRDPN-GMSRGSGFVAFSTPEEATKAMSEMSGKMIENKPLYVAVA 397
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 398 QRKEDRRAR 406
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + L + F G +++ V D + +GYGFV++ +EE
Sbjct: 121 SVRRSGAGNIFIKNLDKSIDHKALHDTFSVFGNIISCKVAVDS-SGQSKGYGFVQYETEE 179
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSL---DVGANLFIGNLDPDVDEKLLYDTF 132
A A+ LN + L K + V Q++ S + N+++ NL + L + F
Sbjct: 180 SAQKAMGQLNGMLLNDKQVYVGPFLRRQERDSTGNKTIFTNVYVKNLAESTTDDDLKNIF 239
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ +M+D + G +GFGF+++++ + + A+E++NG+ +++ V A KK
Sbjct: 240 GEFGKI-TSAVVMKDGE-GKPKGFGFVNFENADDAAKAVESLNGKTFDDKEWFVGRAQKK 297
Query: 193 DTK 195
+
Sbjct: 298 SER 300
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q + YV NLD V++E L ELF G V + V +D + +G GFV F +
Sbjct: 313 KEAADKFQSSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDP-NGMSRGSGFVAFST 371
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ ++ + KP+ V A +D+++
Sbjct: 372 PEEATKAMSEMSGKMIENKPLYVAVAQRKEDRRA 405
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L+E F AGPV+++ V +D +T GY +V F DA+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 100/176 (56%), Gaps = 11/176 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V + S+ ++ ++GA N++I N D+D++ L + F +G +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ K+M DP TG SRGFGF+SY+ E ++ A+E MNG L + + V A KK+ +
Sbjct: 219 S-VKVMMDP-TGKSRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNER 272
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D T +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMD-PTGKSRGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N +L GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 114/177 (64%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+V+E +L+E F AGP++++ V +D +T GY +V F+ DA+ A++
Sbjct: 11 ASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALE 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K L+DTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALFDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ +A++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DEHGSKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + + L LF + GP ++V V D + +G+GFV F EDA A++ +N
Sbjct: 194 YIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDE-SGTSKGFGFVNFERHEDAQKAVEEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G ++GFGF+ + S E + A+ MNG+ + + + ++ A
Sbjct: 313 EFSPFGTI-TSAKVM--MEGGRNKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D + +GYGFV F + + A+ AI +N
Sbjct: 102 FIKNLDKSIDNKALFDTFSAFGNILSCKVVCDE--HGSKGYGFVHFETRDAAERAIDKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D+ L F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPSLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
K+M D ++G S+GFGF++++ E + A+E MNG+ L ++I V A K KGER
Sbjct: 220 -VKVMTD-ESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQK---KGERQ 273
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ V+E L+E+F Q G VV++ V +D +T GY +V + + +DA A+++
Sbjct: 25 SLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRALEL 84
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ + +D G AN+FI NLD +D K L+DTF+AFG I++ K+
Sbjct: 85 LNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGTILS-CKV 143
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
DP +G S+G+GF+ ++ E++ AIE +NG L ++Q+ V
Sbjct: 144 ATDP-SGQSKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFV 184
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 26/202 (12%)
Query: 20 ERNQDATA------YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
ER+Q YV NL T++ L ++F GP+ + V +D + +GFV F
Sbjct: 192 ERDQSGVVSKFNNVYVKNLADSTTDDELKKVFEAYGPISSAVVMRDN-EGKSKCFGFVNF 250
Query: 74 RSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFI 116
+DA A++ LN K K R K S+ + L G NL++
Sbjct: 251 EHADDAAKAVEALNGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYL 310
Query: 117 GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
NLD +D++ L + FS +G IV+ K+MRDP G SRG GF+++ S + + A+ MNG
Sbjct: 311 KNLDDTIDDEKLREIFSEYGTIVS-CKVMRDPQ-GQSRGSGFVAFSSPDEATRAVTEMNG 368
Query: 177 QYLCNRQITVSYAYKKDTKGER 198
+ + ++ + V+ A +K+ + R
Sbjct: 369 KMVGSKPLYVALAQRKEERRNR 390
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+L+ V E LY+ FS G +V+ ++ RD T S G+ +++Y++ + +
Sbjct: 22 VSTSLYVGDLESTVSEAQLYEIFSQVGQVVS-IRVCRDLITRRSLGYAYVNYNNAQDATR 80
Query: 170 AIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
A+E +N + + I + +++ +D + GT I + K+ T A G
Sbjct: 81 ALELLNFNAVNGKPIRIMFSH-RDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFG 136
>gi|268581545|ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
Length = 685
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 112/188 (59%), Gaps = 6/188 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L VTE +L+E F AGPV+++ V +D + L GY +V F+ DA+ A+
Sbjct: 52 ASLYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 111
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N ++G+P+R+ + +D + G N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 112 TMNFETIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILS-CK 170
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
+ D D G+SRG+GF+ +++ E++ AIE +NG L +++ Y K T+ +R
Sbjct: 171 VAADED-GSSRGYGFVHFETEESAQIAIEKVNGMLLSGKKV---YVGKFQTRAQRLKELG 226
Query: 204 ERILAANN 211
E L N
Sbjct: 227 ESGLKYTN 234
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V N + +E L ++F + G + + V D +G+GFV + + A A+ L
Sbjct: 235 VFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTD-ADGKPKGFGFVAYADPDAAQKAVDDL 293
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV-------------------GANLFIGNLDPDVDEKL 127
N L G ++++ KKS G NL++ N+D ++ ++
Sbjct: 294 NEKTLEGTDLKLSVCRAQKKSERTADLKRKYEALKQERVQRYQGVNLYVKNIDEELTDEG 353
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F++FG I T+ K+M D + G S+GFGF+ ++ E + AA+ MN + + ++ + V+
Sbjct: 354 LRAHFASFGTI-TSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTEMNSKMMGSKPLYVA 411
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 412 LAQRKEDR 419
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q +R Q YV N+D ++T+E L F G + + V D +G+GFV F
Sbjct: 327 LKQERVQRYQGVNLYVKNIDEELTDEGLRAHFASFGTITSAKVMVDE-NGRSKGFGFVCF 385
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ V A +D+++
Sbjct: 386 EKPEEATAAVTEMNSKMMGSKPLYVALAQRKEDRRA 421
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + S D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSAADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 ELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ D + GNS+G+GF+ Y++ +A++ AI+++NG L +++ V + KKD
Sbjct: 174 VAVD-EHGNSKGYGFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKKD 223
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V D N +GYGFV + + + A+ AIK +N
Sbjct: 146 FIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEHGN-SKGYGFVHYETSDAANQAIKSVN 204
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D + + + F +G
Sbjct: 205 GMLLNEKKVFVGHHIPKKDRMSKFEEMKANF---TNIYVKNIDAETTDDEFRELFEKYGQ 261
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ + D D G RGFGF+++ E + A++ +N +++ V A KK + E
Sbjct: 262 I-TSASLAHD-DQGKVRGFGFVNFIRHEDAAKAVDELNDLDFKGQKLYVGRAQKKHEREE 319
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 70/236 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D + T++ ELF + G + + + D + +G+GFV F EDA A+ LN
Sbjct: 239 YVKNIDAETTDDEFRELFEKYGQITSASLAHDDQGKV-RGFGFVNFIRHEDAAKAVDELN 297
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ G+ + V +A Q+K + G NL++ NL ++D++ L
Sbjct: 298 DLDFKGQKLYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEIDDEELRK 357
Query: 131 TFSAFGVIVTNPKIMRDP-----------------------------------------D 149
F +G I T+ K+MRD D
Sbjct: 358 IFEPYGAI-TSAKVMRDTTPLDKVEGAEKEDGEKKESESSAEDKEEEKKDDADELAKKLD 416
Query: 150 T----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
T G S+GFGF+ + + + + A+ +N + + ++ + V+ A +K+ +
Sbjct: 417 TVTIGGEKKVLGKSKGFGFVCFSNPDEATKAVTELNQKMIHSKPLYVALAQRKEVR 472
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 117/184 (63%), Gaps = 9/184 (4%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFV 71
G SAE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFV
Sbjct: 6 GMSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFV 63
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLL 128
E+ A+ A++ LN K++ IRVN A Q +++ + +N +F+G+L P+V++++L
Sbjct: 64 EYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVL 123
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
FSAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++
Sbjct: 124 GKAFSAFGTL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Query: 189 AYKK 192
A +K
Sbjct: 183 ANQK 186
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 247 NTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQSDR------GFAFVKLDTHEHAAMAI 300
Query: 84 KVLNMIKLYGKPIRVN 99
L ++G+PI+ +
Sbjct: 301 VQLQGQLVHGRPIKCS 316
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRMERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 17/268 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD VT+ L+++F Q G VV+V V +D T GYG+V + + +DA A+ V
Sbjct: 13 SLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 72
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L KPIR+ + +D G AN+FI NLD +D K L+DTFS+FG I++ K+
Sbjct: 73 LNFTPLNNKPIRIMYSHRDPSIRKSGMANIFIKNLDKGIDHKALHDTFSSFGNILS-CKV 131
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGERHGTPA 203
D +G S+G+GF+ +DS EA+ AI+ +NG + ++Q+ V + +K D G +
Sbjct: 132 ATDA-SGQSKGYGFVQFDSEEAAQNAIDKLNGMLVNDKQVYVGHFLRKQDRDGALYSIKF 190
Query: 204 ERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAAS--GPISAV 261
+ N S + L+N +G + V R A+G + G ++
Sbjct: 191 NNVFVKNLAES----------TTDEELKNIFAEHGAITSAVVMRD-ADGKSKCFGFVNFE 239
Query: 262 RPPPPPPQAAAFPPMQVAGQAAWQGQPQ 289
A ++ G+ + G+ Q
Sbjct: 240 SADDAAKAVEALNGKKIDGEEWYVGKAQ 267
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 20/190 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+V NL T+E L +F + G + + V +D + +GFV F S +DA A++
Sbjct: 192 NVFVKNLAESTTDEELKNIFAEHGAITSAVVMRD-ADGKSKCFGFVNFESADDAAKAVEA 250
Query: 86 LNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLDPDVDEKLL 128
LN K+ G+ V KA + K+++D G NL+I NLD ++++ L
Sbjct: 251 LNGKKIDGEEWYVGKAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKNLDDSINDEKL 310
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG I T+ K+MRDP +G SRG GF+++ + E + A+ MNG+ L ++ + V+
Sbjct: 311 KELFSDFGAI-TSCKVMRDP-SGISRGSGFVAFSTPEEASRALAEMNGKMLISKPLYVAL 368
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 369 AQRKEERRAR 378
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ Q Y+ NLD + +E L ELF G + + V +D + + +G GFV F +
Sbjct: 285 KETVDKFQGLNLYIKNLDDSINDEKLKELFSDFGAITSCKVMRDP-SGISRGSGFVAFST 343
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N L KP+ V A + ++
Sbjct: 344 PEEASRALAEMNGKMLISKPLYVALAQRKEE 374
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ YVG++ P VTE LL+E+F GPV ++ V +D VT GY +V F + DA+ A
Sbjct: 74 QTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERA 133
Query: 83 IKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+ +N + G P R+ + +D +KS VG N+F+ NLDP +D K LYDTFS FG I+
Sbjct: 134 LDTMNFTCIKGVPCRIMWSQRDPSLRKS-GVG-NIFVKNLDPSIDNKALYDTFSLFGNIL 191
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ K+ DP TG S+G+G++ Y++ EA+ AI +NG + ++ V + K+ +
Sbjct: 192 S-CKVANDP-TGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQER 245
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 24/191 (12%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL Q T+ L F G V + V KD + ++G+GFV + + A A++ L
Sbjct: 254 CYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSATNRGFGFVNYEDADGAHAAVEGL 313
Query: 87 NM----------IKLY-GKP-IRVNKASQDKKSLDV----------GANLFIGNLDPDVD 124
+ ++LY GK R + + ++ D G NL++ NLD +
Sbjct: 314 SGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLDDLLQ 373
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
++ L + F+ +G I T+ ++MRD TGNSRGFGF+ + + E + A+ MNG+ + + +
Sbjct: 374 DEELREAFTNYGTI-TSARVMRDS-TGNSRGFGFVCFSTPEEAATAVAEMNGKLITGKPV 431
Query: 185 TVSYAYKKDTK 195
V++A +K+ +
Sbjct: 432 YVAFAQRKEVR 442
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLDP + + L++ F G +++ V D T +GYG+V + + E A AI +N
Sbjct: 167 FVKNLDPSIDNKALYDTFSLFGNILSCKVAND-PTGQSKGYGYVHYETAEAATEAINKIN 225
Query: 88 MIKLYGKPIRVN--KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
+ + G + V + Q++ ++ N ++ NL + L F FG V + +M
Sbjct: 226 GMLIAGTEVFVGHFQKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQ-VNSAVVM 284
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
+DP++ +RGFGF++Y+ + + AA+E ++G+
Sbjct: 285 KDPNSATNRGFGFVNYEDADGAHAAVEGLSGK 316
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V + S+ ++ ++GA N++I N D+D+ L + FS +G +
Sbjct: 159 NGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M DP +G S+GFGF+S++ E ++ A+E MNG+ + + + V A KK
Sbjct: 219 S-VKVMTDP-SGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKK 269
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + + L ELF + G ++V V D + +G+GFV F ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTD-PSGKSKGFGFVSFEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N + GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S + + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKVIFVGRAQKK 269
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEINGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG L+PQVTE +L+ELF GPV ++ V +D VT GY +V + + D + A++
Sbjct: 61 ASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALE 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTVINGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 180 VAQD-EHGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD 229
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N ++ NLD + + L + F G +++ V +D N +GYGFV + ++E A
Sbjct: 145 KNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAAA 203
Query: 81 YAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFS 133
AIK +N + L K + V K + K ++ AN +++ N++ + + D F+
Sbjct: 204 QAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINSEASDDEFRDLFT 263
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
+G VT+ + RD + G SRGFGF+++ + EA+ A+E +NG+ + + V A KK
Sbjct: 264 KYGE-VTSSSLARDQE-GKSRGFGFVNFTTHEAASQAVEELNGKDFRGQDLYVGRAQKKH 321
Query: 194 TKGE--RHGTPAERILAAN 210
+ E R A R AN
Sbjct: 322 EREEELRKSYEAARQEKAN 340
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 65/231 (28%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ + +++ +LF + G V + + +D+ +G+GFV F + E A A++ LN
Sbjct: 245 YVKNINSEASDDEFRDLFTKYGEVTSSSLARDQ-EGKSRGFGFVNFTTHEAASQAVEELN 303
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A Q+K + G NL+I NL DVD++ L
Sbjct: 304 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARQEKANKYQGVNLYIKNLSDDVDDEKLRA 363
Query: 131 TFSAFGVIVTNPKIMRDPDT---------------------------------------- 150
FS FG I T+ K+MRD +
Sbjct: 364 MFSEFGPI-TSAKVMRDSISEGEDEEKAEEETPAPEAEVKKEDSEADADSQEAADKKDAK 422
Query: 151 ------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + E + A+ MN + + N+ + V+ A +KD +
Sbjct: 423 KGDKKLGKSKGFGFVCFSNPEDATKAVADMNQRMIDNKPLYVALAQRKDVR 473
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L+E F AGPV+++ V +D +T GY +V F DA+ A+
Sbjct: 11 ASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVVKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D++++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M DP TG SRGFGFISY+ E ++ A+E MNG L + + V A KK
Sbjct: 220 -VKVMTDP-TGKSRGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKK 269
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + +E L ELF + G ++V V D T +G+GF+ + ED
Sbjct: 185 AKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTD-PTGKSRGFGFISYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N +L GK + V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVMLEE--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + D G N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD D+D++ L
Sbjct: 252 NGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + D +KS VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQHDPSLRKS-GVG-NIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKK 269
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD +D++ L
Sbjct: 252 NGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTKGERHGTPA----ERILAANNPSSQKSRPHTLFASGPPSLQN 232
+K+ ER +R+ + +Q++ P F + P QN
Sbjct: 369 QRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQN 412
>gi|365758210|gb|EHN00063.1| Hsh49p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 213
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 117/199 (58%), Gaps = 15/199 (7%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
+ D+T YVGN+DP++T+ L+ELF+Q PV+ + PKD+V +QGY F+EF ++EDA+Y
Sbjct: 6 DSDSTVYVGNIDPRITKGQLYELFIQINPVLRIKYPKDKVLQTYQGYAFIEFYNKEDAEY 65
Query: 82 AIKVL-NMIKLYGKPIRVNKAS--------QDKKSLDVG---ANLFIGNLDPDVDEKLLY 129
I+++ N +KLY + I+V + + S D+ A LF+ NL +D L
Sbjct: 66 VIQIMNNTVKLYDRLIKVRQVTSSVGTASLSSNNSKDIALPIAKLFVKNLADSIDIDQLA 125
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG ++ P+I G + + ++ FE +D AI+++N Q + N +IT+ YA
Sbjct: 126 KIFGKFGKTISKPEIFH-LSNGKLKC-ACVYFEDFEKADLAIKSLNNQLVANNRITIDYA 183
Query: 190 YKKDTKGE-RHGTPAERIL 207
+K++ K ++G +R+L
Sbjct: 184 FKENGKASTKYGNEVDRLL 202
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 119
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 120 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 173
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 93 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 150
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD+ L + FS FG ++
Sbjct: 151 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLS 210
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 211 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 260
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V ++ L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 176 AKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 234
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 235 ANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 294
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 295 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 351
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 352 KPLYVALAQRKEER 365
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NVFIKNLDESIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
+ D SRG+GF+ +++ EA++ AI+ MNG L +R++ V + + + +G
Sbjct: 129 KVVC---DEHGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYG 184
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 103/179 (57%), Gaps = 12/179 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D + +GYGFV F ++E A+ AI+ +
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETQEAANRAIQTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ L+ GA N++I N D+D+K L + FSAFG +
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 197
+ K+M D DTG SRGFGF++Y + E + A+ MNG+ + R I V A K+ + +GE
Sbjct: 219 S-VKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGE 275
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 21/197 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++ A+ + Y+ N + ++ L E+F G ++V V D T +G+GFV + +
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGN 240
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGN 118
E+A A+ +N ++ G+ I V +A Q++ + G NL++ N
Sbjct: 241 HEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKN 300
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD +D+ L FS +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+
Sbjct: 301 LDDGIDDDRLRKEFSPYGTI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 179 LCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 358 VSTKPLYVALAQRKEER 374
>gi|254584372|ref|XP_002497754.1| ZYRO0F12716p [Zygosaccharomyces rouxii]
gi|238940647|emb|CAR28821.1| ZYRO0F12716p [Zygosaccharomyces rouxii]
Length = 210
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 119/201 (59%), Gaps = 13/201 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ N+D + YVGN+DP+VT+ L+ELFVQ P+ + PKD+V +HQGY FVEF S E
Sbjct: 2 SSNSNRDTSIYVGNIDPKVTKAQLYELFVQISPIRRIRYPKDKVLQIHQGYAFVEFYSVE 61
Query: 78 DADYAIKVL-NMIKLYGKPIRVNKA-------SQDKKSLDV--GANLFIGNLDPDVDEKL 127
D Y ++V+ N++ LY + +R+ + S + K L + A +F+ N+D +D
Sbjct: 62 DVQYVLRVMNNVVSLYDRTLRIRRVNGPGTNNSVNAKELSLLPLAKVFVKNVDESIDNVH 121
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F FG + + P+I G R F+ + + SDAAI++++ Q + NR+I +
Sbjct: 122 LSKIFGKFGPLASLPEIFY-LSHGQLRC-AFVYFRDYTHSDAAIKSLDNQLVVNRRINLD 179
Query: 188 YAYKKDT-KGERHGTPAERIL 207
YA K+++ + ++G+ +R+L
Sbjct: 180 YAIKENSQQNSKYGSDVDRLL 200
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 108/182 (59%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAELALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEESIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L NR++ VS+ + + G
Sbjct: 129 KVV---CDDHGSRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSHFKSRQEREAELGV 185
Query: 202 PA 203
A
Sbjct: 186 RA 187
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 56/281 (19%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV NL + E+ L ELF Q G ++V V +D + +G+GFV F E+A A+
Sbjct: 191 TNVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVM 249
Query: 85 VLNMIKLYGKPIRVNKA--------------------SQDKKSLDVGANLFIGNLDPDVD 124
+N ++ G+ + V +A QD+ + G NL++ NLD +D
Sbjct: 250 DMNGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMKQDRLNHYQGVNLYVKNLDDSID 309
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
+ L FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG L + +
Sbjct: 310 NERLRKEFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGCILGTKPL 366
Query: 185 TVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPV 244
V+ A +KD ER N Q+ R ++A G P L
Sbjct: 367 YVALAQRKD----------ERKAILTNQFMQQ-RLSNVWALGGPHL-------------- 401
Query: 245 PPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQ 285
G+ P+S P P +A P QV + +++
Sbjct: 402 -------GSFQQPVSYFLPTVPQVRACLQPDSQVEQEESFK 435
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 100/171 (58%), Gaps = 11/171 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEESIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETREAAQQAISTMN 159
Query: 88 MIKLYGKPIRVN--KASQDKKS-LDVGA----NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V+ K+ Q++++ L V A N+++ NL D+DE+ L + FS FG ++
Sbjct: 160 GMLLNNRKVFVSHFKSRQEREAELGVRAMEFTNVYVKNLQMDIDEQGLEELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
K+MRD D+G+SRGFGF++++ E + A+ MNG+ + + + V A K
Sbjct: 220 -VKVMRD-DSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGQLLYVGRAQK 268
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 113/182 (62%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L++ F AGP++++ V +D +T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI N+D +D K LYDTFSAFG I++
Sbjct: 71 TMNYDVIKGRPIRIMWSQRDPGLRKS-GVG-NIFIKNMDESIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + + + E G+
Sbjct: 129 KVVC---DERGSKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRKEREEELGS 185
Query: 202 PA 203
A
Sbjct: 186 KA 187
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 102/178 (57%), Gaps = 12/178 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ N+D + + L++ F G +++ V D + +GYGFV F +EE A+ AI+ +N
Sbjct: 102 FIKNMDESIDNKALYDTFSAFGNILSCKVVCDERGS--KGYGFVHFETEEAANRAIETMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++G+ N++I N D +++ L + F+AFG ++
Sbjct: 160 GMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEVFAAFGRTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 197
++M+D + G SRGFGF+++ E + A++ MNG+ L + I V A K+ + +GE
Sbjct: 220 -VRVMKD-ERGRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKRLERQGE 275
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N +E L E+F G ++V V KD +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDE-RGRSRGFGFVNFAHHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A QD+ G NL++ NLD +D++ L
Sbjct: 253 GKELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGVNLYVKNLDDSIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ K+M D SRGFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFAPYGTI-TSAKVM--TDGPQSRGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+++ +
Sbjct: 370 RREER 374
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 113/184 (61%), Gaps = 9/184 (4%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRS 75
AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 10 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMD 67
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++ +L F
Sbjct: 68 MRSAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAF 127
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
SAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 128 SAFGTL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 186
Query: 193 DTKG 196
G
Sbjct: 187 TQGG 190
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 50/219 (22%)
Query: 17 HSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ ++N++ T+ +VG+L P+V +++L + F G + + V D + +GYGF+
Sbjct: 94 YQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFL 153
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD--------------------------- 104
FR + DA+ AI +N L + IRVN A+Q
Sbjct: 154 AFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINF 213
Query: 105 -----------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNS 153
+++ +++GNL P + L F + G + +I D
Sbjct: 214 QGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD---- 266
Query: 154 RGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
RGF F+ D+ E + AI + GQ + R I S+ +
Sbjct: 267 RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDR 305
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + D G N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD D+D++ L
Sbjct: 252 NGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G SRGFGF+ + S E + A+ MNG + + + VS A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSRGFGFVCFSSPEEATKAVTEMNGIIVATKPLYVSLA 368
Query: 190 YKKDTK 195
++K+ +
Sbjct: 369 HRKEER 374
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKK 269
>gi|443722844|gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 111/185 (60%), Gaps = 8/185 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 12 ASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 71
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K LYDTFSAFG I++
Sbjct: 72 TMNFDAIKGRPIRIMWSQRDPSLRKS-GVG-NIFIKNLDKNIDNKALYDTFSAFGNILSC 129
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
M D S G+GF+ +++ EA+ +IE +NG L +++ V + + E G
Sbjct: 130 KIAM---DQNGSLGYGFVHFETEEAARNSIEKVNGMLLNGKKVFVGRFMSRKERLEMLGD 186
Query: 202 PAERI 206
A++
Sbjct: 187 KAKKF 191
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ + D+ +L GYGFV F +EE A +I+ +N
Sbjct: 103 FIKNLDKNIDNKALYDTFSAFGNILSCKIAMDQNGSL--GYGFVHFETEEAARNSIEKVN 160
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-------GANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L GK + V + K+ L++ N+++ NL+ +D+K L + F FG I++
Sbjct: 161 GMLLNGKKVFVGRFMSRKERLEMLGDKAKKFTNVYVKNLNETMDDKKLREMFEVFGKIIS 220
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
M + + G RGFGF+S+D EA+ A+E +N + + ++I V A K K ER
Sbjct: 221 AK--MMNTEEGQKRGFGFVSFDDHEAAAKAVEELNNKEVEGKEIYVGRAQK---KAERQA 275
Query: 201 TPAERI 206
E+
Sbjct: 276 ELKEKF 281
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL+ + ++ L E+F G +++ + +G+GFV F E A A++ LN
Sbjct: 195 YVKNLNETMDDKKLREMFEVFGKIISAKMMNTE-EGQKRGFGFVSFDDHEAAAKAVEELN 253
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
++ GK I V +A + K+ + G NL++ NLD +D++ L
Sbjct: 254 NKEVEGKEIYVGRAQKKAERQAELKEKFERMKMERINRYQGVNLYVKNLDEQIDDERLRK 313
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ ++M + G ++GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 314 EFSQFGTI-TSARVM--TEGGRTKGFGFVCFSSPEEATKAVTEMNGRIVVAKPLYVALAQ 370
Query: 191 KKDTK 195
+K+ +
Sbjct: 371 RKEDR 375
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 45 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 104
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 105 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILS-CK 163
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + NS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 164 VAQD-EFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 214
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 136 FIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFAN-SKGYGFVHYETAEAANNAIKHVN 194
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+D ++ + F AFG I T
Sbjct: 195 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDLEITDDEFRTMFEAFGEI-T 253
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ + D D G SRGFGF++Y + E+++AA+ MN + + ++++ V A KK + E
Sbjct: 254 SATLSHDQD-GKSRGFGFVNYANHESAEAAVAEMNEKEVKSQKLYVGRAQKKHEREEE 310
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+D ++T++ +F G + + + D+ +G+GFV + + E A+ A+ +N
Sbjct: 229 YIKNIDLEITDDEFRTMFEAFGEITSATLSHDQ-DGKSRGFGFVNYANHESAEAAVAEMN 287
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL D+D++ L D
Sbjct: 288 EKEVKSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDIDDEKLRD 347
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ +G I T+ K+MRD
Sbjct: 348 LFTPYGTI-TSAKVMRD 363
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D S+G+ F+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAANKAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 220 -VKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 185 AKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRD-CSGKSKGFGFVSYEKHED 243
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 244 ANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 303
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 304 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 360
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 361 KPLYVALAQRKEER 374
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 124/228 (54%), Gaps = 16/228 (7%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ Y GN+ QVTE LL E+F GP+ + + KD+ + YGFV + A AI
Sbjct: 64 SVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSS-----YGFVHYFDRRCASMAIM 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVT-- 140
LN ++G+P++VN A + D + N+F+G+L P+V + L+D+FSAF +
Sbjct: 119 TLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYY 178
Query: 141 -NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-R 198
+ ++M D TG SRGFGF+S+ + + + AI MNG+++ +RQI ++A K T GE +
Sbjct: 179 RDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDK 238
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP 246
H + + ++ N SS+ R S + +N PQ G + P
Sbjct: 239 HSSDGKSVVELTNGSSEDGRE----LSNEDAPENNPQFTTVYVGNLSP 282
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 46/204 (22%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVY----VPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+VG+L P+VT+ L++ F + Y V D+ T +G+GFV FR+++DA AI
Sbjct: 151 FVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAI 210
Query: 84 KVLNMIKLYGKPIRVNKAS------QDKKSLDVGA------------------------- 112
+N + + IR N A+ +DK S D +
Sbjct: 211 NEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 270
Query: 113 ---NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
+++GNL P+V + L+ F G ++ ++ RD +GFGF+ Y++ + +
Sbjct: 271 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRD------KGFGFVRYNTHDEAA 324
Query: 169 AAIEAMNGQ-YLCNRQITVSYAYK 191
AI+ N Q +L +RQI S+ K
Sbjct: 325 LAIQMGNAQPFLFSRQIRCSWGNK 348
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Q T YVGNL P+VT+ L LF + AG + V V +D+ G+GFV + + ++A
Sbjct: 271 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDK------GFGFVRYNTHDEAA 324
Query: 81 YAIKVLNMI-KLYGKPIRVN 99
AI++ N L+ + IR +
Sbjct: 325 LAIQMGNAQPFLFSRQIRCS 344
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E+F GPV ++ V +D VT GY +V + S +DA+ A++
Sbjct: 27 ASLYVGDLQPDVTEAVLYEVFNTIGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAEAALE 86
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN I++ G P R+ +++D GA N+F+ NLD +D K LYDTF+ FG I++ K
Sbjct: 87 NLNYIEIKGHPTRIMWSNRDPSLRKSGAGNIFVKNLDKSIDTKSLYDTFAHFGTILS-CK 145
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D TG SR +GF+ Y+S E++ AIE +NG + +++ V+ + K+D + E
Sbjct: 146 VAVDS-TGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAPFLRKQDRETE 199
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D T + YGFV + SEE A AI+ +N
Sbjct: 118 FVKNLDKSIDTKSLYDTFAHFGTILSCKVAVDS-TGASRRYGFVHYESEESAREAIEKVN 176
Query: 88 MIKLYGKPIRVN--KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
+ + GK + V QD+++ +V NL++ N D DE+ L +G I + M
Sbjct: 177 GMLIGGKKVEVAPFLRKQDRETEEVYTNLYVRNFPADWDEEALRQFLEKYGEITS----M 232
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
+ R F F++Y + + +N L
Sbjct: 233 MLKEDSKGRRFAFVNYKEASVAKEVVTTLNDLKL 266
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N EE L + + G + ++ + +D + + + FV ++ A + LN
Sbjct: 206 YVRNFPADWDEEALRQFLEKYGEITSMMLKED---SKGRRFAFVNYKEASVAKEVVTTLN 262
Query: 88 MIKL------------YGKPIRVNKAS---------QDKKSLDVGANLFIGNLDPDVDEK 126
+KL K R N QD K L +NL+I NLD D+
Sbjct: 263 DLKLEEASDPLLVCPHQDKVKRQNMLKAQFSTVSPGQDDKRL--TSNLYIKNLDDTFDDA 320
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + F FG I T+ K+M D + NSRGFGF+ + + + + AI AM+ + + + + V
Sbjct: 321 SLGELFKQFGTI-TSSKVMLDAN-NNSRGFGFVCFSNPQEATKAIAAMHLKLVKGKPLYV 378
Query: 187 SYAYKKDTKGER 198
A K+D + R
Sbjct: 379 GLAEKRDQRLMR 390
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++ + Y+ NLD + L ELF Q G + + V D N +G+GFV F + ++A
Sbjct: 301 DKRLTSNLYIKNLDDTFDDASLGELFKQFGTITSSKVMLD-ANNNSRGFGFVCFSNPQEA 359
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
AI +++ + GKP+ V A + + L
Sbjct: 360 TKAIAAMHLKLVKGKPLYVGLAEKRDQRL 388
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 113/184 (61%), Gaps = 9/184 (4%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRS 75
AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 10 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMD 67
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++ +L F
Sbjct: 68 MRSAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAF 127
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
SAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 128 SAFGTL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 186
Query: 193 DTKG 196
G
Sbjct: 187 TQGG 190
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 50/215 (23%)
Query: 17 HSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ ++N++ T+ +VG+L P+V +++L + F G + + V D + +GYGF+
Sbjct: 94 YQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFL 153
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD--------------------------- 104
FR + DA+ AI +N L + IRVN A+Q
Sbjct: 154 AFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINF 213
Query: 105 -----------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNS 153
+++ +++GNL P + L F + G + +I D
Sbjct: 214 QGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD---- 266
Query: 154 RGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
RGF F+ D+ E + AI + GQ + R I S+
Sbjct: 267 RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSW 301
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 45 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 104
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 105 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILS-CK 163
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + NS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 164 VAQD-EFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 214
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 136 FIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFAN-SKGYGFVHYETAEAANNAIKHVN 194
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+D ++ + F AFG I T
Sbjct: 195 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDLEITDDEFRVMFEAFGEI-T 253
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ + D D G SRGFGF++Y + E+++AA+ MN + + +++ V A KK + E
Sbjct: 254 SATLSHDQD-GKSRGFGFVNYANHESAEAAVAEMNEKEVKTQKLYVGRAQKKHEREEE 310
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+D ++T++ +F G + + + D+ +G+GFV + + E A+ A+ +N
Sbjct: 229 YIKNIDLEITDDEFRVMFEAFGEITSATLSHDQ-DGKSRGFGFVNYANHESAEAAVAEMN 287
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL D+D++ L D
Sbjct: 288 EKEVKTQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDIDDEKLRD 347
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ +G I T+ K+MRD
Sbjct: 348 LFTPYGTI-TSAKVMRD 363
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L E+F + GP ++V V D +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N + GK + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFLPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D++++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D D G S+GFGF+S++ E + A++ MNG+ + + + V A KK
Sbjct: 220 -VKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKK 269
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 58 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 117
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 118 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 176
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 177 VAQD-EYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 226
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 149 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN-SKGYGFVHYETAEAATNAIKHVN 207
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N++ DV ++ F +G I T
Sbjct: 208 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI-T 266
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ EA+ AA+EA+N L +++ V A KK + E R
Sbjct: 267 SATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 327 KQYEAARIEKAS 338
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N++ VT+E LF + G + + + +D T
Sbjct: 217 FVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNET 276
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN +L G+ + V +A + +K
Sbjct: 277 GKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEK 336
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MR+
Sbjct: 337 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNI-TSAKVMRE 377
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
H A A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + +
Sbjct: 34 HGANTATSASLYVGELDPTVTESMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNA 93
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAF 135
D + A++ LN + +P R+ + +D G N+FI NLD +D K L+DTF+AF
Sbjct: 94 ADGERALEQLNYSSIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAF 153
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
G +++ K+ D + GNS+G+GF+ Y++ EA++ AI+++NG L ++++ V
Sbjct: 154 GNVLS-CKVATD-EHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVYV 202
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 22/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKD-RVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N+DP+VT+E LF Q G V + + +D + NL G+GFV F + E+A A+ L
Sbjct: 226 YVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQGRNL--GFGFVNFETHEEAQKAVDAL 283
Query: 87 NMIKLYGKPIRV-----------------NKASQDKKSLDVGANLFIGNLDPDVDEKLLY 129
+ +G+ + V ++A Q++ + G NL+I NL+ DVD++ L
Sbjct: 284 HESDFHGRKLYVARAQKKAEREAELRKQYDQARQERMNKYQGVNLYIKNLEDDVDDEKLR 343
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG I T+ ++MRD + G S+GFGF+ Y + + + A+ MN + + ++ + VS A
Sbjct: 344 AEFEPFGTI-TSCRVMRD-ERGKSKGFGFVCYSAPDEATKAVAEMNNKMIGSKPLYVSLA 401
Query: 190 YKKDTK 195
+K+ +
Sbjct: 402 QRKEIR 407
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 96/172 (55%), Gaps = 10/172 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D N +GYGFV + + E A+ AIK +N
Sbjct: 133 FIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGN-SKGYGFVHYETAEAAENAIKSVN 191
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A NL++ N+DP+V ++ + F +G + +
Sbjct: 192 GMLLNDKKVYVGPHISRKERQSKIDEMRAHFTNLYVKNIDPEVTDEEFENLFKQYGQVQS 251
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ +++ D G + GFGF+++++ E + A++A++ R++ V+ A KK
Sbjct: 252 S--LLKRDDQGRNLGFGFVNFETHEEAQKAVDALHESDFHGRKLYVARAQKK 301
>gi|358394883|gb|EHK44276.1| hypothetical protein TRIATDRAFT_79372 [Trichoderma atroviride IMI
206040]
Length = 746
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTPIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D +TG S+G+GF+ Y++ EA+ AI+ +NG L +++ V Y KKD
Sbjct: 178 VAQD-ETGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD 227
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 12/194 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
++ NLD + + L + F G +++ V +D T +GYGFV + ++E A AIK
Sbjct: 148 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-TGASKGYGFVHYETDEAAAQAIKH 206
Query: 86 LNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L K + V K + K ++ AN +++ N+ PDV + + F +G
Sbjct: 207 VNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNVYVKNISPDVTDNEFRELFEKYG-D 265
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE- 197
VT+ + RD + G SRGFGF+++ + EA+ A++ +NG +++ V A KK + E
Sbjct: 266 VTSSSLARDQE-GKSRGFGFVNFTTHEAAYKAVDELNGNDFRGQELYVGRAQKKHEREEE 324
Query: 198 -RHGTPAERILAAN 210
R A R+ A+
Sbjct: 325 LRKSYEAARLEKAS 338
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 62/231 (26%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N+ P VT+ ELF + G V + + +D+ +G+GFV F + E A A+
Sbjct: 240 TNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQ-EGKSRGFGFVNFTTHEAAYKAVD 298
Query: 85 VLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKL 127
LN G+ + V +A + +K S G NL+I NLD DVD+
Sbjct: 299 ELNGNDFRGQELYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLDDDVDDDK 358
Query: 128 LYDTFSAFGVIVTNPKIMRDP--------------------------------------- 148
L FS FG I T+ K+MRD
Sbjct: 359 LRQMFSEFGPI-TSAKVMRDSLQEGEEEVKDQEKDKENQKEAENEAEAESAENAEKKAEK 417
Query: 149 ----DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + N+ + V+ A +KD +
Sbjct: 418 KGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVR 468
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L+++F Q G VV+V V +D T GYG+V + S +DA A+
Sbjct: 37 TSLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALD 96
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN KPIR+ + +D G N+FI NLD +D K L+DTFS+FG I++ K
Sbjct: 97 ILNFTPFNNKPIRIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILS-CK 155
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D +G SRG+GF+ +D+ EA+ AI+ +NG L ++Q+ V + +K +
Sbjct: 156 VATDS-SGQSRGYGFVQFDNEEAAQNAIDKLNGMLLNDKQVYVGHFLRKHER 206
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 23/207 (11%)
Query: 12 NLLGQH---SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGY 68
+ L +H SA + YV NL TEE L +F + G + + + +D + +
Sbjct: 199 HFLRKHERDSASNKKFNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRD-ADGKSKCF 257
Query: 69 GFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------G 111
GFV F + + A A++ LN K+ K V KA + ++ L++ G
Sbjct: 258 GFVNFENTDAAAKAVESLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQG 317
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
NL+I NLD + ++ L + FS FG+I T+ K+MRDP +G SRG GF+++ + E + A+
Sbjct: 318 VNLYIKNLDDSISDENLKELFSDFGMI-TSCKVMRDP-SGISRGSGFVAFSTPEEASRAL 375
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
MNG+ + ++ + V+ A +K+ + R
Sbjct: 376 AEMNGKMVVSKPLYVALAQRKEERRAR 402
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 7/182 (3%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + + L + F G +++ V D + +GYGFV+F +EE
Sbjct: 118 SIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDS-SGQSRGYGFVQFDNEE 176
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFS 133
A AI LN + L K + V K +D S N+++ NL E+ L + F
Sbjct: 177 AAQNAIDKLNGMLLNDKQVYVGHFLRKHERDSASNKKFNNVYVKNLSESTTEEDLKNIFG 236
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
+G I T+ IMRD D G S+ FGF+++++ +A+ A+E++NG+ + +++ V A KK
Sbjct: 237 EYGEI-TSAVIMRDAD-GKSKCFGFVNFENTDAAAKAVESLNGKKIDDKEWYVGKAQKKS 294
Query: 194 TK 195
+
Sbjct: 295 ER 296
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AG ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ ++++EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DEHGSRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGHF---KSRRERAAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETYEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ +++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G SR FGF++++ E + A+ MNG+ + R + S A K+
Sbjct: 220 -VKVMRD-SSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKR 269
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDS-SGRSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ S G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLSRYQGVNLYVKNLDDSIDDGKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + +S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L E+F + GP ++V V D +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N + GK + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFLPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D++++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D D G S+GFGF+S++ E + A++ MNG+ + + + V A KK
Sbjct: 220 -VKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKK 269
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 111/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L E+F + GP ++V V D +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
+ GK + V +A +QD+ + G NL++ NLD +D++ L
Sbjct: 252 YGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFLPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D++++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D D G S+GFGF+S++ E + A++ M G+ + + + V A KK
Sbjct: 220 -VKVMTD-DNGKSKGFGFVSFERHEDAQKAVDEMYGKDMNGKSMFVGRAQKK 269
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 174 VAQD-EFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 223
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKHVN 204
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ NLD +V + + F +G I T
Sbjct: 205 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEI-T 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ I RD +TG SRGFGF+++ E++ AA+E +N + +++ V A KK + E R
Sbjct: 264 SASISRDGETGKSRGFGFVNFVKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELR 323
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 324 KQHEAARVEKAS 335
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 79/261 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV NLD +V+ E ELF + G + + + +D T
Sbjct: 214 FVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGET 273
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN + G+ + V +A + +K
Sbjct: 274 GKSRGFGFVNFVKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEK 333
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL++ NL D+D++ L D F +FG I T+ ++MRD
Sbjct: 334 ASKYQGVNLYVKNLTDDIDDEKLRDLFISFGNI-TSARVMRDTAGDPGSESEKEKESANK 392
Query: 148 ---------------------------------PDTGNSRGFGFISYDSFEASDAAIEAM 174
G S+GFGF+ + + + + A+ M
Sbjct: 393 ENVKDEAKKESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEM 452
Query: 175 NGQYLCNRQITVSYAYKKDTK 195
N + + + + V+ A +KD +
Sbjct: 453 NQRMVNGKPLYVALAQRKDVR 473
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VT+ L++LF Q G VV+V V +D + GYG+V + + +DA A++
Sbjct: 25 TSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALE 84
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN + G PIRV + +D GA N+FI NLD +D K L+DTFS FG I++ K
Sbjct: 85 VLNFTPVNGSPIRVMYSHRDPSVRKSGAGNIFIKNLDKAIDHKALHDTFSVFGNILS-CK 143
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ DP +G S+G+GF+ +DS EA+ AIE +NG L ++Q+ V
Sbjct: 144 VATDP-SGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYV 185
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 22/199 (11%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+ ++ + +V NL EE L + F + G + +V V +D + +GFV F + +
Sbjct: 197 ATDKTRFNNVFVKNLSETTAEEDLNKAFGEFGTITSVVVMRDG-DGKSRCFGFVNFENAD 255
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNL 119
DA A + LN K K V KA Q K +V GANL+I NL
Sbjct: 256 DAAKAAEALNGKKFDDKEWFVGKA-QKKYEREVELKQRFEQSMKEAADKFQGANLYIKNL 314
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D + ++ + + FS FG I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+ +
Sbjct: 315 DDSIGDEKIKELFSPFGTI-TSCKVMRDPN-GISRGSGFVAFSTPEEASRALLEMNGKMV 372
Query: 180 CNRQITVSYAYKKDTKGER 198
++ + V+ A +K+ + R
Sbjct: 373 ASKPLYVALAQRKEDRRAR 391
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+L+ +V + LYD F+ G +V+ ++ RD + S G+G+++Y + + +
Sbjct: 23 VTTSLYVGDLEANVTDSQLYDLFNQVGQVVS-VRVCRDLTSRRSLGYGYVNYSNPQDAAR 81
Query: 170 AIEAMN 175
A+E +N
Sbjct: 82 ALEVLN 87
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ Q A Y+ NLD + +E + ELF G + + V +D + +G GFV F +
Sbjct: 298 KEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDP-NGISRGSGFVAFST 356
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ V A +D+++
Sbjct: 357 PEEASRALLEMNGKMVASKPLYVALAQRKEDRRA 390
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 54 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 114 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 172
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L ++++ V + KKD
Sbjct: 173 VAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKD 222
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 145 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVN 203
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N+D D ++ + F FG I T
Sbjct: 204 GMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTDEEFRELFEKFGEI-T 262
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD ++G SRGFGF+++ S E++ AA++ +N + ++++ V A KK + E R
Sbjct: 263 SATLARDSESGKSRGFGFVNFTSHESAAAAVDNLNEKDFKSQKLYVGRAQKKHEREEELR 322
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 323 KQYEAARIEKAS 334
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 80/262 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N+D T+E ELF + G + + + +D +
Sbjct: 213 FVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSES 272
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F S E A A+ LN + + V +A + +K
Sbjct: 273 GKSRGFGFVNFTSHESAAAAVDNLNEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEK 332
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL+I NL D+D++ L D FS +G I T+ K+MRD
Sbjct: 333 ASKYQGVNLYIKNLSDDIDDEKLRDLFSGYGTI-TSAKVMRDNLAAESSSDSEKEAKSEG 391
Query: 148 -------------------PDT---------------GNSRGFGFISYDSFEASDAAIEA 173
DT G S+GFGF+ + S + + A+
Sbjct: 392 KENEPPEESKDEAAEKAETKDTKEAKTESKKADKKLLGKSKGFGFVCFSSPDEASKAVTE 451
Query: 174 MNGQYLCNRQITVSYAYKKDTK 195
MN + + + + V+ A +KD +
Sbjct: 452 MNQRMVNGKPLYVALAQRKDVR 473
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E+F GPV ++ V +D +T GY +V + S +DA+ A++
Sbjct: 31 ASLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNYYSVQDAEAALE 90
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN I + G P R+ +++D GA N+F+ NLD +D K YDTFS FG I++ K
Sbjct: 91 SLNYIDIKGHPTRIMWSNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTFSHFGPILS-CK 149
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKD 193
+ D + G S+G+GF+ YD+ E++ AIE +NG + +++ VS + K+D
Sbjct: 150 VAMD-ENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSPFIKKQD 199
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + ++ F GP+++ V D + +GYGFV + +EE A AI+ +N
Sbjct: 122 FVKNLDRSIDTKAFYDTFSHFGPILSCKVAMDE-NGVSKGYGFVHYDTEESAKEAIEKVN 180
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+ + GK + V+ K +D S+DV NL++ N DE+ L +G I +
Sbjct: 181 GMVIGGKKVEVSPFIKKQDRDPASVDVFTNLYVRNFPVSWDEEALKQFLDKYGEITS--- 237
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
M + G R F F+++ E + A+EA+NG L
Sbjct: 238 -MMIKEDGKGRKFAFVNFAEPEMAKEAVEALNGTKL 272
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N EE L + + G + ++ + +D + + FV F E A A++ LN
Sbjct: 212 YVRNFPVSWDEEALKQFLDKYGEITSMMIKED---GKGRKFAFVNFAEPEMAKEAVEALN 268
Query: 88 MIKLY--GKPIRV----NKA-------SQDKKSLD------VGANLFIGNLDPDVDEKLL 128
KL +P+ V +KA SQ LD +NL+I NLD ++ L
Sbjct: 269 GTKLEEGSEPLLVCPHQDKAKRQAFLKSQYISGLDGSIASKASSNLYIKNLDDSFTDESL 328
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F FG I T+ KIMRD +G SRGFGF+ + E + AI M+ + + + + V
Sbjct: 329 QELFGQFGSI-TSCKIMRDA-SGVSRGFGFVCFSRPEEATKAIAGMHLKIVKGKPLYVGL 386
Query: 189 AYKKDTKGER 198
A KK+ + R
Sbjct: 387 AEKKEQRLSR 396
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 103 QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYD 162
+D + L A+L++G+L PDV E +LY+ F++ G V++ ++ RD T S G+ +++Y
Sbjct: 22 RDNQQLYNSASLYVGDLQPDVTEAILYEVFNSVGP-VSSIRVCRDSITRKSLGYAYVNYY 80
Query: 163 SFEASDAAIEAMN 175
S + ++AA+E++N
Sbjct: 81 SVQDAEAALESLN 93
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+A+ YVG+L+ V EE L++LF Q + ++ V +D+ GY +V F + +DA A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
++LN L GKPIR+ + +D G N+FI NLD +D K L+DTF+AFG +++
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLS-C 152
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D +G S+G+GF+ +D+ EA+ AI+ +NG + ++Q+ V ++ + + +G+P
Sbjct: 153 KVALDS-SGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTNGSP 211
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL T+E L +LF G + + V KD V + +GFV F++ + A A++ LN
Sbjct: 217 YVKNLSETYTDEDLKKLFGPYGTITSATVMKD-VNGKSRCFGFVNFQNPDSAAAAVERLN 275
Query: 88 MIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLLY 129
+ + R + ++ + L GANL++ NLD ++ L
Sbjct: 276 GTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLK 335
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
D FS FG I T+ K+M D + G S+G GF+S+ + E + A+ MNG+ + + + V+ A
Sbjct: 336 DLFSEFGTI-TSCKVMIDSN-GRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVA 393
Query: 190 YKKDTK 195
+K+ +
Sbjct: 394 QRKEER 399
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q A Y+ NLD ++E L +LF + G + + V D +G GFV F + E+A
Sbjct: 313 EKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEA 371
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+ +N + KP+ V A + ++
Sbjct: 372 SKALNEMNGKLIGRKPLYVAVAQRKEE 398
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 103/165 (62%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 51 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 110
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 111 ELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDIAIDNKALHDTFAAFGNILS-CK 169
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V +
Sbjct: 170 VAQD-ENGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVYVGH 213
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 142 FIKNLDIAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETAEAATNAIKHVN 200
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+DP+V + F FG I T
Sbjct: 201 GMLLNEKKVYVGHHIPKKERQSKFDEMKANFTNVYVKNIDPEVSDDEFRTLFENFGQI-T 259
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD D+G SRGFGF+++ S EA+ AA++A++ L + + V A KK + E R
Sbjct: 260 SASLARDGDSGTSRGFGFVNFSSHEAAAAAVDALHETELKGQALFVGRAQKKHEREEELR 319
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 320 KQYEAARIEKAS 331
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 42/209 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+DP+V+++ LF G + + + +D + +G+GFV F S E A A+ L+
Sbjct: 235 YVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGTSRGFGFVNFSSHEAAAAAVDALH 294
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A + +K S G NL++ NLD ++D++ L
Sbjct: 295 ETELKGQALFVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYVKNLDDEIDDERLRQ 354
Query: 131 TFSAFGVIVTNPKIMRDP------------------------DTGNSRGFGFISYDSFEA 166
FS +G I T+ K+MRD G S+GFGF+ + + +
Sbjct: 355 EFSPYGTI-TSAKVMRDSLDSPKEKDGEESKVGEPEEKATDKKQGKSKGFGFVCFSNPDE 413
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ A+ MN + + + + V+ A +KD +
Sbjct: 414 ASKAVAEMNQRMVNGKPLYVALAQRKDVR 442
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+A+ YVG+L+ V EE L++LF Q + ++ V +D+ GY +V F + +DA A+
Sbjct: 34 NASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAM 93
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
++LN L GKPIR+ + +D G N+FI NLD +D K L+DTF+AFG +++
Sbjct: 94 ELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLS-C 152
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D +G S+G+GF+ +D+ EA+ AI+ +NG + ++Q+ V ++ + + +G+P
Sbjct: 153 KVALDS-SGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTNGSP 211
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL T+E L +LF G + + V KD V + +GFV F++ + A A++ LN
Sbjct: 217 YVKNLSETYTDEDLKKLFGPYGTITSATVMKD-VNGKSRCFGFVNFQNPDSAAAAVERLN 275
Query: 88 MIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLLY 129
+ + R + ++ + L GANL++ NLD ++ L
Sbjct: 276 GTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLK 335
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
D FS FG I T+ K+M D + G S+G GF+S+ + E + A+ MNG+ + + + V+ A
Sbjct: 336 DLFSEFGTI-TSCKVMIDSN-GRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVA 393
Query: 190 YKKDTK 195
+K+ +
Sbjct: 394 QRKEER 399
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q A Y+ NLD ++E L +LF + G + + V D +G GFV F + E+A
Sbjct: 313 EKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEA 371
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+ +N + KP+ V A + ++
Sbjct: 372 SKALNEMNGKLIGRKPLYVAVAQRKEE 398
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 50 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 109
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 110 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 168
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 169 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 219
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 105/192 (54%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 141 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 199
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN +++ N+DP+V ++ + F +G I T
Sbjct: 200 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELFGKYGDI-T 258
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ I RD D+G SRGFGF++Y + + +A++ +N + ++++ V A KK + E R
Sbjct: 259 SATISRD-DSGKSRGFGFVNYVDHQNAQSAVDELNDKDFHSQKLYVGRAQKKHEREEELR 317
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 318 RQYEAARLEKAS 329
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 66/232 (28%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+DP+VT+E ELF + G + + + +D + +G+GFV + ++A A+ LN
Sbjct: 234 YVKNIDPEVTDEEFRELFGKYGDITSATISRDD-SGKSRGFGFVNYVDHQNAQSAVDELN 292
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ + + V +A + +K S G NL++ NL DVD+ L +
Sbjct: 293 DKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVDDDKLRE 352
Query: 131 TFSAFGVIVTNPKIMRD-----PDT----------------------------------- 150
FS FG I T+ K+MRD D+
Sbjct: 353 LFSPFGTI-TSAKVMRDTVGVSSDSDKEEGKEASEKEGEEASEKEETKVKAEDEEKTETK 411
Query: 151 -------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + S + + A+ MN + + + + V+ A +KD +
Sbjct: 412 KPEKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 463
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 178 VAQD-ENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 227
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N ++ NLD + + L + F G +++ V +D N +GYGFV + ++E A
Sbjct: 143 KNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAS 201
Query: 81 YAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFS 133
AIK +N + L K + V K + K ++ AN +++ N+ PDV E + F
Sbjct: 202 QAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNIAPDVTEDDFRELFE 261
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG VT+ + RD + G SRGFGF+++ + E++ A++ +NG+ + + V A KK
Sbjct: 262 KFG-DVTSSSLARDQE-GKSRGFGFVNFTTHESASKAVDDLNGKDFHGQDLYVGRAQKKH 319
Query: 194 TKGE--RHGTPAERILAAN 210
+ E R A R+ AN
Sbjct: 320 EREEELRKSYEAARLEKAN 338
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 69/237 (29%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N+ P VTE+ ELF + G V + + +D+ +G+GFV F + E A A+
Sbjct: 241 NVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQ-EGKSRGFGFVNFTTHESASKAVDD 299
Query: 86 LNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLL 128
LN +G+ + V +A + +KS + G NL+I NLD DVD+ L
Sbjct: 300 LNGKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDKL 359
Query: 129 YDTFSAFGVIVTNPKIMR------DPDT-------------------------------- 150
FS FG I T+ K+MR D D
Sbjct: 360 RQMFSEFGPI-TSAKVMRETPTEGDEDKKEETQDDKEKENKEEAKEEANEETKEGEEAKD 418
Query: 151 ------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + N+ + V+ A +KD +
Sbjct: 419 DKKTEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVR 475
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L++ F AGP+V++ V +D +T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI N+D +D K LYDTFSAFG I++
Sbjct: 71 TMNYDVIKGRPIRIMWSQRDPALRKS-GVG-NIFIKNIDDSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + + + GT
Sbjct: 129 KVVC---DERGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGT 185
Query: 202 PAERI 206
+
Sbjct: 186 KVMKF 190
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N +T+E L E F G ++V V +D +G+GFV + EDA A+ +N
Sbjct: 194 YIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDE-KGRSRGFGFVNYAHHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ GK I V +A QD+ G NL++ NLD +D++ L
Sbjct: 253 GKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQDRIQRYQGVNLYVKNLDDSIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +G I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGTI-TSAKVM--TEAGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+++ +
Sbjct: 370 RREER 374
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 101/178 (56%), Gaps = 12/178 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ N+D + + L++ F G +++ V D + +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNIDDSIDNKALYDTFSAFGNILSCKVVCDERGS--KGYGFVHFETQEAANRAIETMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++ G N++I N ++ ++ L + FSAFG ++
Sbjct: 160 GMLLNDRKVFVGHFKSRKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 197
++MRD + G SRGFGF++Y E + A++ MNG+ + + I V A K+ + +GE
Sbjct: 220 -VRVMRD-EKGRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKRLERQGE 275
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q +R Q YV NLD + +E L + F G + + V + +G+GFV F
Sbjct: 283 LKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFSPYGTITSAKVMTE--AGQSKGFGFVCF 340
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFI 116
S E+A A+ +N + KP+ V A + ++ + N ++
Sbjct: 341 SSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKYM 383
>gi|346323639|gb|EGX93237.1| polyadenylate-binding protein [Cordyceps militaris CM01]
Length = 736
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D +TG+S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 174 VAQD-ETGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKD 223
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D T +GYGFV + ++E A AIK +N
Sbjct: 146 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-TGSSKGYGFVHYETDEAAQQAIKHVN 204
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN ++I N+ PDV + F A G VT
Sbjct: 205 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYIKNIAPDVTDDQFRVLFEAHG-DVT 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ I RDPD G SRGFGF+++ + EA+ AA+E +N + +++ V A KK + E R
Sbjct: 264 SSSIARDPD-GKSRGFGFVNFTTHEAASAAVEELNNKDFHGQELYVGRAQKKHEREEELR 322
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 323 KSYEAARIEKAS 334
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+ P VT++ LF G V + + +D +G+GFV F + E A A++ LN
Sbjct: 239 YIKNIAPDVTDDQFRVLFEAHGDVTSSSIARD-PDGKSRGFGFVNFTTHEAASAAVEELN 297
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
+G+ + V +A + +K S G NL+I NLD DVD++ L
Sbjct: 298 NKDFHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDEKLRT 357
Query: 131 TFSAFGVIVTNPKIMRD 147
F+ FG I T+ K+MRD
Sbjct: 358 MFTEFGPI-TSAKVMRD 373
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 58 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 117
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 118 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 176
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 177 VAQD-EYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 226
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 149 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN-SKGYGFVHYETAEAATNAIKHVN 207
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N++ DV ++ F +G I T
Sbjct: 208 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI-T 266
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ EA+ AA+EA+N L +++ V A KK + E R
Sbjct: 267 SATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 327 KQYEAARIEKAS 338
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N++ VT+E LF + G + + + +D T
Sbjct: 217 FVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNET 276
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN +L G+ + V +A + +K
Sbjct: 277 GKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEK 336
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MR+
Sbjct: 337 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNI-TSAKVMRE 377
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 74 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 133
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 134 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 192
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 193 VAQD-EYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 242
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 165 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN-SKGYGFVHYETAEAATNAIKHVN 223
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N++ DV ++ F +G I T
Sbjct: 224 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI-T 282
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ EA+ AA+EA+N L +++ V A KK + E R
Sbjct: 283 SATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELR 342
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 343 KQYEAARIEKAS 354
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N++ VT+E LF + G + + + +D T
Sbjct: 233 FVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNET 292
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN +L G+ + V +A + +K
Sbjct: 293 GKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEK 352
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MR+
Sbjct: 353 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNI-TSAKVMRE 393
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALH 70
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + GKP+R+ + +D + VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKRGVG-NIFVKNLDKSINNKALYDTVSAFGNILSCK 129
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 130 VVC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAE 182
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 31/210 (14%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD +D++ L+ FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDGIDDERLWKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ A+ MNG+ + + + V+ A +K+ +
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKEER 374
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALH 70
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + GKP+R+ + +D + VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKRGVG-NIFVKNLDKSINNKALYDTVSAFGNILSCK 129
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 130 VVC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAE 182
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 31/210 (14%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD +D++ L+ FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDGIDDERLWKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ A+ MNG+ + + + V+ A +K+ +
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKEER 374
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 104 QLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS-CK 162
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
+ D + G S+G+GF+ Y++ EA++ AI+A+NG L ++++ V + + +
Sbjct: 163 VATD-EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRERQSKL 221
Query: 204 ERILA 208
E + A
Sbjct: 222 EEMKA 226
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q YV NLDP+VT++ +LF Q G V + + D +G+GFV F + E+A
Sbjct: 225 KAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDE-QGQSRGFGFVNFETHEEAQ 283
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A++ L+ + +G+ + V++A + +K S G NL+I NL+ D+
Sbjct: 284 KAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDI 343
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L F FG I T+ K+MRD + G S+GFGF+ + S + + A+ MN + + ++
Sbjct: 344 DDERLRQEFEPFGSI-TSAKVMRD-EKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKP 401
Query: 184 ITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 402 LYVSLAQRREVR 413
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 14/181 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D +GYGFV + + E A+ AIK +N
Sbjct: 135 FIKNLDEQIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAVN 193
Query: 88 MIKLYGKPIRV-----NKASQDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFG 136
+ L K + V KAS ++ + N+++ NLDP+V + F FG
Sbjct: 194 GMLLNDKKVYVGHHISRKASSRERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQFG 253
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
+ + +++ + G SRGFGF+++++ E + A+E ++ R++ VS A KK +
Sbjct: 254 NVTS--AVIQTDEQGQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAERE 311
Query: 197 E 197
E
Sbjct: 312 E 312
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 113/185 (61%), Gaps = 8/185 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L++ F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI N+D +D K LYDTFSAFG I++
Sbjct: 71 TMNYDVIKGRPIRIMWSQRDPGLRKS-GVG-NIFIKNMDESIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + + + G+
Sbjct: 129 KVVC---DEKGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGS 185
Query: 202 PAERI 206
A +
Sbjct: 186 KAMKF 190
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 37/257 (14%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N T+E L E+F G ++V V KD +G+GFV + EDA A+ +
Sbjct: 193 VYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDE-KGRSRGFGFVNYAHHEDAQKAVNEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ GK + V +A QD+ G NL++ NLD +D++ L
Sbjct: 252 NGKEINGKILYVGRAQKRLERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDSIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ +G I T+ K+M D S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFAPYGTI-TSAKVM--TDGSQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP-RP 248
+++ ER N Q R TL P + + Q+ V P PP R
Sbjct: 369 QRRE----------ERKAILTNKYMQ--RLATLRTMASPLIDSYHQSGYYVTLPQPPMRS 416
Query: 249 YANGAASGPISAVRPPP 265
+ N +A +S+VRP P
Sbjct: 417 FYNHSA---VSSVRPVP 430
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 100/178 (56%), Gaps = 12/178 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ N+D + + L++ F G +++ V D + +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNMDESIDNKALYDTFSAFGNILSCKVVCDEKGS--KGYGFVHFETQEAANRAIETMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++ G+ N++I N D ++ L + FSAFG ++
Sbjct: 160 GMLLNDRKVFVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 197
++M+D + G SRGFGF++Y E + A+ MNG+ + + + V A K+ + +GE
Sbjct: 220 -VRVMKD-EKGRSRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQKRLERQGE 275
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 50 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 109
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 110 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 168
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 169 VAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 219
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 141 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVN 199
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN +++ N+DP+V ++ + F FG I T
Sbjct: 200 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYVKNIDPEVTDEEFRELFGKFGDI-T 258
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ I RD D+G SRGFGF++Y E + A++ +N + +++ V A KK + E R
Sbjct: 259 SATISRD-DSGKSRGFGFVNYVDHENAQTAVDDLNDKDFHGQKLYVGRAQKKHEREEELR 317
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 318 RQYEAARLEKAS 329
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 64/230 (27%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+DP+VT+E ELF + G + + + +D + +G+GFV + E+A A+ LN
Sbjct: 234 YVKNIDPEVTDEEFRELFGKFGDITSATISRDD-SGKSRGFGFVNYVDHENAQTAVDDLN 292
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
+G+ + V +A + +K S G NL++ NL DVD++ L +
Sbjct: 293 DKDFHGQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRE 352
Query: 131 TFSAFGVIVTNPKIMRD-------------------------------------PDT--- 150
FSAFG I T+ K+MRD D
Sbjct: 353 LFSAFGTI-TSAKVMRDTVGAGSDSEKEETKESSEEVEEPKEEETNAKTEDEDKTDAKKS 411
Query: 151 -----GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + S + + A+ MN + + + + V+ A +KD +
Sbjct: 412 DKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 461
>gi|170574509|ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding protein 4, putative [Brugia malayi]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N +YGKPIR+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILS-CK 136
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + NS+G+GF+ +++ E++ AIE +NG L +++ V
Sbjct: 137 VANDEEL-NSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYV 178
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 34/260 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N ++ +E L +LF + G + + V D +G+GFV F + EDA+ A+ ++
Sbjct: 202 YIKNFADELDKEALEKLFFKFGKITSAAVMVD-ADGKSKGFGFVAFENPEDAEKAVTEMH 260
Query: 88 MIKLYG--KPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
+L G + + V +A ++++S ++ G NL++ NLD V++ +L
Sbjct: 261 EYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDIL 320
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F A+G I T+ K+M D D G S+GFGF+ ++ + + A+ MNG+ +C + + V+
Sbjct: 321 KQNFEAYGKI-TSAKVMCD-DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVAL 378
Query: 189 AYKK-DTKGERHGTPAERI--LAANNPSSQKSRPHT-----LFASGPPSLQNAPQANGTV 240
A +K D K + +R+ + +N + +T F S Q A T+
Sbjct: 379 AQRKEDRKAQLASQYMQRLASIRMHNAGTMHGTVYTPGTGGFFVSSTLQNQRAFMPTATI 438
Query: 241 GGP----VPPRPYANGAASG 256
G PR GAA+G
Sbjct: 439 PGAQMRGTTPRWNTIGAAAG 458
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 12/187 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V D N +GYGFV F +EE
Sbjct: 99 SMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEELN-SKGYGFVHFETEE 157
Query: 78 DADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A AI+ +N + L GK + V K + + ++G N++I N ++D++ L
Sbjct: 158 SAQKAIEKVNGMLLEGKKVYVGKFQPRMARLREMGETTRRFTNVYIKNFADELDKEALEK 217
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL--CNRQITVSY 188
F FG I T+ +M D D G S+GFGF+++++ E ++ A+ M+ L R++ V
Sbjct: 218 LFFKFGKI-TSAAVMVDAD-GKSKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCR 275
Query: 189 AYKKDTK 195
A KK+ +
Sbjct: 276 AQKKNER 282
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L P V+E +L+E F AGPV+++ V +D + L GY +V F+ DA+ A+
Sbjct: 57 ASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 116
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N ++G+P+R+ + +D + G N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 117 TMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILS-CK 175
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D D GNS+G+GF+ +++ ++ AIE +NG L ++++ V
Sbjct: 176 VATD-DEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+A R + ++ NLD + + +++ F G +++ V D N +GYGFV F +E
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEH 196
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVG----ANLFIGNLDPDVDEKLLYD 130
A AI+ +N + L K + V K +Q K L N+F+ N +D++ L
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ +M D G +GFGF+++ +A+ A+E +N L +S
Sbjct: 257 MFSKFGEI-TSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVC- 313
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFA 224
+ K ER + A Q+ + L+
Sbjct: 314 RAQKKSERSAELKRKYEALKQERVQRYQGVNLYV 347
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V N + +E L +F + G + + V D +G+GFV F ++ A A++ L
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKL 298
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV-------------------GANLFIGNLDPDVDEKL 127
N L G +++ KKS G NL++ N++ D+++
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L D FS+FG I T+ K+M D + G S+GFGF+ ++ E + AA+ MN + + + + V+
Sbjct: 359 LRDHFSSFGTI-TSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVA 416
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 417 LAQRKEDR 424
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 58 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 117
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 118 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 176
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 177 VAQD-EYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 226
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 149 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN-SKGYGFVHYETAEAATNAIKHVN 207
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N++ DV ++ F +G I T
Sbjct: 208 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI-T 266
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ EA+ AA+EA+N L +++ V A KK + E R
Sbjct: 267 SATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 327 KQYEAARIEKAS 338
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N++ VT+E LF + G + + + +D T
Sbjct: 217 FVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNET 276
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN +L G+ + V +A + +K
Sbjct: 277 GKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEK 336
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MR+
Sbjct: 337 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNI-TSAKVMRE 377
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+LDP VTE +L+E F QAGPV+++ V +D ++ GY +V F DA+ A+
Sbjct: 11 ASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L +P+R+ + +D +KS VG N+FI NL D+D K ++DTFSAFG I++
Sbjct: 71 TMNFEPLKNRPMRIMWSQRDPSLRKS-GVG-NVFIKNLHKDIDNKAIFDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
++ D + GNSRG+GF+ +++ EA++ AI +NG L +++ V
Sbjct: 128 CRVATD-EQGNSRGYGFVHFETEEAANEAINKVNGMLLNEKKVFV 171
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 119/249 (47%), Gaps = 28/249 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N ++ + L E+F G + + V D+ T +G+GFV F + ++A+ A+K LN
Sbjct: 195 YVKNFGEELDDGKLKEMFEVYGKITSARVMTDQ-TGKSRGFGFVSFENPDNAEQAVKELN 253
Query: 88 MIKL-YGKPIRVNKASQDKKSL-DV----------------GANLFIGNLDPDVDEKLLY 129
+L GK I V +A + + L D+ G NL++ NLD +D++ L
Sbjct: 254 DKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERMTRYQGVNLYVKNLDDVIDDERLR 313
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ +G I T+ K+M D S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 314 REFAPYGTI-TSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEMNGRIIVQKPLYVALA 372
Query: 190 YKK-DTKGERHGTPAERILAANNPSSQ----KSRPHTLFASGPPSLQ-NAPQANGTVGGP 243
+K D + +R P Q S P + P S+ A A+G V
Sbjct: 373 QRKEDRRAHLSSQFVQRFTGVRVPFGQMPFNHSTPTSFIV--PASMHPRAFFASGNVANN 430
Query: 244 VPPRPYANG 252
V P+ +A G
Sbjct: 431 VRPQRWAGG 439
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL + + +++ F G +++ V D N +GYGFV F +EE A+ AI +N
Sbjct: 102 FIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGN-SRGYGFVHFETEEAANEAINKVN 160
Query: 88 MIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K S+ ++ + A LF + N ++D+ L + F +G I T
Sbjct: 161 GMLLNEKKVFVGKFVPRSERERMMGDKARLFTNVYVKNFGEELDDGKLKEMFEVYGKI-T 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN-RQITVSYAYKK 192
+ ++M D TG SRGFGF+S+++ + ++ A++ +N + L N ++I V A KK
Sbjct: 220 SARVMTDQ-TGKSRGFGFVSFENPDNAEQAVKELNDKELGNGKKIYVGRAQKK 271
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q YV NLD + +E L F G + + V D +G+GFV F S E+A
Sbjct: 292 RYQGVNLYVKNLDDVIDDERLRREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEAT 351
Query: 81 YAIKVLNMIKLYGKPIRV 98
A+ +N + KP+ V
Sbjct: 352 KAVTEMNGRIIVQKPLYV 369
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR-VTNLHQGYGFVEFRSE 76
SAE + A YVGNL P+VTE +L E+F AGPV +V + DR + Q YGFVE+
Sbjct: 39 SAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDM 98
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFS 133
A+ A++ LN K++ IRVN A +Q+K+ ++F+G+L P+V++++L F+
Sbjct: 99 RAAETALQTLNGRKIFDTEIRVNWAYQGTQNKEDTSNHYHVFVGDLSPEVNDEVLAKAFA 158
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
AFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 159 AFGSL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 216
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 91/238 (38%), Gaps = 56/238 (23%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + + +VG+L P+V +E+L + F G + + V D + +GYGF+ FR
Sbjct: 128 QNKEDTSNHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRD 187
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLD-------------------------- 109
+ DA+ AI +N L + IRVN A+Q +S
Sbjct: 188 KTDAEQAIATMNGEWLGSRAIRVNWANQKTQSGGGGGMPPGMPSMGDSMGMGGGAMGGVP 247
Query: 110 ---------------------VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDP 148
+++GNL P + L F + G + +I
Sbjct: 248 APMNFQGGPLSYESVVSQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQA 304
Query: 149 DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERI 206
D RGF F+ D+ E + AI + GQ + R I S+ KD G P I
Sbjct: 305 D----RGFAFVKLDTHENAAMAIVQLQGQLVHGRPIKCSWG--KDRSAADTGAPGSMI 356
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L ++++ V + KKD
Sbjct: 174 VAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKD 223
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVN 204
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N+D D E+ D F FG I T
Sbjct: 205 GMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI-T 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD ++G SRGFGF+++ S + + AA+EA+N + +++ V A KK + E R
Sbjct: 264 SATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELR 323
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 324 KQYEAARIEKAS 335
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N+D TEE +LF + G + + + +D +
Sbjct: 214 FVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAES 273
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F S ++A A++ LN G+ + V +A + +K
Sbjct: 274 GKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEK 333
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MRD
Sbjct: 334 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTI-TSAKVMRD 374
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L++LF Q G VV+V V +D T GYG+V F + +DA A+ V
Sbjct: 36 SLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDV 95
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L + IR+ + +D G AN+FI NLD +D K L+DTFS+FG+I++ KI
Sbjct: 96 LNFTPLNNRSIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILS-CKI 154
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
D +G S+G+GF+ +D+ EA+ AI+ +NG + ++Q+ V + +K +
Sbjct: 155 ATDA-SGLSKGYGFVQFDNEEAAQNAIDKLNGMLINDKQVYVGHFLRKQDR 204
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+++ + + YV NL T+E L F + G + + + +D + +GFV F +
Sbjct: 205 ENALSKTKFNNVYVKNLSESTTDEELMINFGEYGTITSALIMRD-ADGKSRCFGFVNFEN 263
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGN 118
+DA A++ LN K K V KA + K++ D G NL++ N
Sbjct: 264 PDDAAKAVEGLNGKKFDDKEWYVGKAQKKSEREQELKGRFEQSIKEAADKYPGLNLYLKN 323
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD + ++ L + F+ +G I T+ K+MRDP TG SRG GF+++ + E + A+ MNG+
Sbjct: 324 LDDTISDEKLKEMFADYGTI-TSCKVMRDP-TGISRGSGFVAFSTPEEATRALGEMNGKM 381
Query: 179 LCNRQITVSYAYKKDTKGER 198
+ + V+ A +K+ + R
Sbjct: 382 FAGKPLYVALAQRKEERRAR 401
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L ++++ V + KKD
Sbjct: 174 VAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKD 223
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVN 204
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N+D D E+ D F FG I T
Sbjct: 205 GMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI-T 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD ++G SRGFGF+++ S + + AA+EA+N + +++ V A KK + E R
Sbjct: 264 SATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELR 323
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 324 KQYEAARIEKAS 335
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N+D TEE +LF + G + + + +D +
Sbjct: 214 FVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAES 273
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F S ++A A++ LN G+ + V +A + +K
Sbjct: 274 GKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEK 333
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MRD
Sbjct: 334 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTI-TSAKVMRD 374
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L ++++ V + KKD
Sbjct: 174 VAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKD 223
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVN 204
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N+D D E+ D F FG I T
Sbjct: 205 GMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI-T 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD ++G SRGFGF+++ S + + AA+EA+N + +++ V A KK + E R
Sbjct: 264 SATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELR 323
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 324 KQYEAARIEKAS 335
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N+D TEE +LF + G + + + +D +
Sbjct: 214 FVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAES 273
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F S ++A A++ LN G+ + V +A + +K
Sbjct: 274 GKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEK 333
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MRD
Sbjct: 334 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTI-TSAKVMRD 374
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 62 TMNFDLIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 118
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D + GNS+G+GF+ +++ E+++ +IE +NG L +++ V
Sbjct: 119 CKVAQD-EKGNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVYV 162
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 25/187 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV-PKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N ++ +E L E+F + G + + V KD + +G+GFV F + E A++A++ L
Sbjct: 186 YVKNFGDELNDETLKEMFEKYGTITSHRVMIKDGKS---RGFGFVAFENPESAEHAVQEL 242
Query: 87 NMIKL-YGKPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
N +L GK + V +A ++++ +++ G NL++ NLD +D++ L
Sbjct: 243 NGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDERL 302
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
FS FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + ++ + V+
Sbjct: 303 RKEFSPFGTI-TSAKVM--LEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVAL 359
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 360 AQRKEDR 366
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 49 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 108
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 109 QLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGTVLS-CK 167
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D +TG S+G+GF+ Y++ EA++ AI+A+NG L ++++ V + + +
Sbjct: 168 VATD-ETGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYVGHHISRKER 218
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 143/336 (42%), Gaps = 39/336 (11%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q YV NLDP+VT++ ELF + G V + + D +G+GFV F + ++A
Sbjct: 226 RAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDE-EGKSKGFGFVNFETHDEAQ 284
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ LN +L GK + V++A + +K S G NL+I NL+ DV
Sbjct: 285 KAVDELNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLEDDV 344
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F FG I T+ K+MRD + G S+GFGF+ + S + + A+ MN + + +
Sbjct: 345 DDDKLRAEFEPFGTI-TSCKVMRD-EKGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKP 402
Query: 184 ITVSYAYKKDTK--------GERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQ 235
+ VS A +++ + +R+ ++ AA P S + P Q
Sbjct: 403 LYVSLAQRREVRRQQLESQIAQRNQIRMQQAAAAGLPGSYVNGPLYYPPGPGFPPQPRGM 462
Query: 236 ANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGV 295
G +PPRP P+ PPPQ PP QG P+ G
Sbjct: 463 MGYPQPGMLPPRPRYGPNGQVPVPGPYGQAPPPQGYGMPPYGGQRPPRPQGGPRGGPGGS 522
Query: 296 PQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQP 331
P PN P P + RPP Q
Sbjct: 523 P-----------THPNAPIPRSNGPQNGAGRPPAQG 547
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G V++ V D T +GYGFV + + E A+ AIK +N
Sbjct: 140 FIKNLDEAIDNKALHDTFAAFGTVLSCKVATDE-TGRSKGYGFVHYETAEAAENAIKAVN 198
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A NL++ NLDP+V + + F +G + +
Sbjct: 199 GMLLNDKKVYVGHHISRKERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTS 258
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
++ + G S+GFGF+++++ + + A++ +N L +++ VS A KK + E
Sbjct: 259 --AVISVDEEGKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQKKAEREE 313
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LD VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 62 ASLYVGELDSSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKALE 121
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 122 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 180
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D +TG S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 181 VAQD-ETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKD 230
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D T +GYGFV + ++E A AIK +N
Sbjct: 153 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDE-TGASKGYGFVHYETDEAASQAIKHVN 211
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ + ++ + F FG VT
Sbjct: 212 GMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATDEEFRELFEKFG-DVT 270
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD D+ SRGFGF+++ + E + A++ +NG+ + + V A KK + E R
Sbjct: 271 SASLARDTDSNKSRGFGFVNFINHEHAAKAVDELNGKDFKGQDLYVGRAQKKHEREEELR 330
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 331 KSYEAARIEKAS 342
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 60/227 (26%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ + T+E ELF + G V + + +D +N +G+GFV F + E A A+ LN
Sbjct: 246 YVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKAVDELN 305
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K S G NL++ NLD DVD+ L +
Sbjct: 306 GKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDDDKLRE 365
Query: 131 TFSAFGVIVTNPKIMRDP------------------------------------------ 148
F+ FG I T+ K+MRD
Sbjct: 366 LFTPFGSI-TSAKVMRDTPAETAEAEEKEKKDSEKNKENIKEGETAEAENTEDKPKSEKR 424
Query: 149 DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ +++ E + A+ MN + + N+ + V+ A +KD +
Sbjct: 425 TVGKSKGFGFVCFNNPEEASKAVTDMNQRMVNNKPLYVALAQRKDVR 471
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 54 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 114 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 172
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 173 VAQD-EFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 222
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 145 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKHVN 203
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ NL+P+V + + F +G I T
Sbjct: 204 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEI-T 262
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ + +++ AA+E +N + +++ V A KK + E R
Sbjct: 263 SASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELR 322
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 323 KQHEAARVEKAS 334
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 81/263 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV NL+P+VT E ELF + G + + + +D T
Sbjct: 213 FVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNET 272
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + + A A++ LN + G+ + V +A + +K
Sbjct: 273 GKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEK 332
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL++ NL D+D++ L D F FG I T+ ++MRD
Sbjct: 333 ASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNI-TSARVMRDTIGDAGSESEKEKEASKD 391
Query: 148 ---------------------------PDT--------GNSRGFGFISYDSFEASDAAIE 172
PDT G S+GFGF+ + + + + A+
Sbjct: 392 NKENVKEETKKEAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVT 451
Query: 173 AMNGQYLCNRQITVSYAYKKDTK 195
MN + + + + V+ A +KD +
Sbjct: 452 EMNQRMVNGKPLYVALAQRKDVR 474
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ VT+ L++LF Q G VV+V V +D T GYG+V + S +DA A+ +
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALDM 84
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L G PIR+ + +D G+ N+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 85 LNFTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILS-CKV 143
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D +G S+G+GF+ +D+ E++ AIE +NG L ++Q+ V
Sbjct: 144 ATDS-SGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 184
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 20/200 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ + YV NL TEE L + F + G + + V +D + +GFV F +
Sbjct: 194 ESAIDKTRFNNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDG-DGKTKCFGFVNFEN 252
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDV--------------GANLFIGN 118
+DA A++ LN K K V KA ++ + L V GANL+I N
Sbjct: 253 ADDAATAVEALNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKN 312
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD + + L FS FG I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+
Sbjct: 313 LDDSIGDDRLKQLFSPFGTI-TSCKVMRDPN-GISRGSGFVAFSTPEEASKALMEMNGKM 370
Query: 179 LCNRQITVSYAYKKDTKGER 198
+ ++ + V+ A +K+ + R
Sbjct: 371 VVSKPLYVALAQRKEDRRAR 390
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 162/375 (43%), Gaps = 44/375 (11%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + + L + F G +++ V D + +GYGFV+F +EE
Sbjct: 105 SVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDS-SGQSKGYGFVQFDNEE 163
Query: 78 DADYAIKVLNMIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLY 129
A AI+ LN + L K + V +++ DK + N+++ NL E+ L
Sbjct: 164 SAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAIDKTRFN---NVYVKNLSETTTEEDLK 220
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F +G I T+ +MRD D G ++ FGF+++++ + + A+EA+NG+ +++ V A
Sbjct: 221 KAFGEYGTI-TSAVVMRDGD-GKTKCFGFVNFENADDAATAVEALNGKKFDDKEWFVGKA 278
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRPHTLF------ASGPPSLQNAPQANGTV-GG 242
KK+ ER R + ++ K + L+ + G L+ GT+
Sbjct: 279 QKKN---ERENELKVRFEQSMKEAADKFQGANLYIKNLDDSIGDDRLKQLFSPFGTITSC 335
Query: 243 PVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPP 302
V P SG ++ P+ A+ M++ G+ +P ++ +
Sbjct: 336 KVMRDPNGISRGSGFVAF-----STPEEASKALMEMNGKMVV-SKPLYVALAQRKEDRRA 389
Query: 303 PMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPP---------QQLL- 352
+Q + P P +A M PP G+G Q + PP QQL+
Sbjct: 390 RLQAQFSQIRPVAMAPSVAPRMPMYPPGGPGLGQQIFYGQAPPAIIPPQPGFGYQQQLVP 449
Query: 353 ----GRPPMPHMSMP 363
G PMP+ +P
Sbjct: 450 GMRPGGAPMPNFFVP 464
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+L+ +V + LYD F+ G +V+ ++ RD T S G+G+++Y S + +
Sbjct: 22 VTTSLYVGDLEANVTDSHLYDLFNQVGQVVS-VRVCRDLTTRRSLGYGYVNYSSPQDAAR 80
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A++ +N L I + Y+++
Sbjct: 81 ALDMLNFTPLNGSPIRIMYSHR 102
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVV---CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AG ++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D+ L D FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D + G SRGFGF+S++ E + A++ MNG+ + + I V A KK
Sbjct: 220 -IRVMTD-ENGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKK 269
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 151/389 (38%), Gaps = 80/389 (20%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + ++ L ++F + G +++ V D +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQRAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ GK I V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M D G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMDG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPY 249
+K+ ER N Q+ S++ P P PP Y
Sbjct: 369 QRKE----------ERQAHLTNQYMQRM----------ASVRAVPNPVINPYQPAPPSGY 408
Query: 250 ANGAASGPISAVRPPPPPPQAAAFPPMQVAGQA---AWQGQ---PQHIGQ--GVPQPVMP 301
A P +AA +P Q+A W Q PQH G +P P
Sbjct: 409 FMAAI---------PQAQNRAAYYPTSQLAQLRPSPRWTTQGVRPQHFQNMPGTMRPSAP 459
Query: 302 PPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQP-------------PVWRQPPPPP 348
P F P P++ S QR Q MG P ++ P
Sbjct: 460 RPQTF--STMRPASQVPRMMST-QRVATQTMGPRPSTAAAAASAPPVRGVPQYKYAPSV- 515
Query: 349 QQLLGRPPMPHMSMPPPPPPQAPPPPPSG 377
R P HM+ P Q P G
Sbjct: 516 -----RNPQQHMNTQPQVTMQQPAVHVQG 539
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NVFIKNLDDSIDNKALYDTFSAFGDILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
+ D SRG+GF+ +++ EA++ AI+ MNG L +R++ V + + + +G
Sbjct: 129 KVVC---DEYGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYG 184
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 103/179 (57%), Gaps = 12/179 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D + +GYGFV F ++E A+ AI+ +
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGS--RGYGFVHFETQEAANRAIQTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ L+ GA N++I N D+D+K L + FSAFG +
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 197
+ K+M D ++G SRGFGF++Y + E + A+ MNG+ + R + V A K+ + +GE
Sbjct: 219 S-VKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGE 275
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 21/197 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++ A+ + Y+ N + ++ L E+F G ++V V D + +G+GFV + +
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGN 240
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGN 118
E+A A+ +N ++ G+ + V +A Q++ + G NL++ N
Sbjct: 241 HEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKN 300
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD +D+ L FS +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+
Sbjct: 301 LDDGIDDDRLRKEFSPYGTI-TSTKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 179 LCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 358 VSTKPLYVALAQRKEER 374
>gi|389610655|dbj|BAM18939.1| polyA-binding protein [Papilio polytes]
Length = 611
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A++
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALE 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 71 GMNFDIIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKTIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D +TG S+G+GF+ +++ EA++ +IE +NG L +++ V
Sbjct: 128 CKVAQD-ETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 171
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N ++E+L E+F + G + + V +D + +G+GFV F + A+ A
Sbjct: 195 YVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSS---RGFGFVAFEDPDAAERACME 251
Query: 86 LNMIKLY-GKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKL 127
LN +L GKP+ R K ++ +K L G NL++ NLD +D++
Sbjct: 252 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AG ++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+DE+ L D F+ +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNAMS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D D+G SRGFGF+S++ E + A++ MNG+ + + I V A KK
Sbjct: 220 -IRVMTD-DSGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQKK 269
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + EE L ++F + G +++ V D + +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDD-SGKSRGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ GKPI V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKEMNGKPIYVGRAQKKVERQAELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSAKVM--LEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 58 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 117
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 118 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 176
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 177 VAQD-EYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 226
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 149 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN-SKGYGFVHYETAEAATNAIKHVN 207
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N++ DV ++ F +G I T
Sbjct: 208 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEI-T 266
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ EA+ AA+E +N L +++ V A KK + E R
Sbjct: 267 SATLSRDNETGKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 327 KQYEAARIEKAS 338
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N++ VT+E LF + G + + + +D T
Sbjct: 217 FVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNET 276
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN +L G+ + V +A + +K
Sbjct: 277 GKSRGFGFVNFSDHEAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEK 336
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MR+
Sbjct: 337 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNI-TSAKVMRE 377
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 112/175 (64%), Gaps = 4/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E+F GPV ++ V +D VT GY +V + S +DA+ A++
Sbjct: 27 ASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAEAALE 86
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN I++ G P R+ +++D GA N+F+ NLD +D K LYDTFS FG I++ K
Sbjct: 87 SLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILS-CK 145
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D +G S+ +GF+ Y++ E++ AIE +NG + +++ V+ + K+D +GE
Sbjct: 146 VAVDA-SGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDREGE 199
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NLD + + L++ F GP+++ V D + + YGFV + +EE
Sbjct: 108 SLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILSCKVAVD-ASGASKRYGFVHYENEE 166
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
A AI+ +N + + GK + V QD++ +V NL++ N D +E+ L +
Sbjct: 167 SAREAIEKVNGMLIGGKRVEVAPFLRKQDREGEEVFTNLYVRNFPADWNEEALRQFLEKY 226
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
G I + ++++ G R F F++Y E + + +N L
Sbjct: 227 GEITS--MMLKEDSKG--RRFAFVNYKEPEVAKEVVNTLNDLKL 266
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N EE L + + G + ++ + +D + + + FV ++ E A + LN
Sbjct: 206 YVRNFPADWNEEALRQFLEKYGEITSMMLKED---SKGRRFAFVNYKEPEVAKEVVNTLN 262
Query: 88 MIKL--YGKPIRV-----------------NKASQDKKSLDVGANLFIGNLDPDVDEKLL 128
+KL +P+ V N +S ++ V +NL+I NLD D++ L
Sbjct: 263 DLKLDESSEPLLVCPHQDKAKRQNLLRAQFNNSSMGQEDKRVTSNLYIKNLDDSFDDESL 322
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F FG I T+ K+M D + +SRGFGF+ + + + + AI AM+ + + + + V
Sbjct: 323 GELFKPFGTI-TSSKVMLDAN-NHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYVGL 380
Query: 189 AYKKD 193
A K+D
Sbjct: 381 AEKRD 385
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+GQ ++ + Y+ NLD +E L ELF G + + V D N +G+GFV F
Sbjct: 297 MGQE--DKRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLD-ANNHSRGFGFVCF 353
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+ ++A AI +++ + GKP+ V A +
Sbjct: 354 TNPQEATKAIAAMHLKLVKGKPLYVGLAEK 383
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 108/171 (63%), Gaps = 9/171 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADYAIK 84
YVGNL P+VT+ +L E+F AGPVV+ + +DR N G YGFVE+ AD A+
Sbjct: 25 YVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFNYGFVEYADMRSADQALT 82
Query: 85 VLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN K++ IRVN A +Q+K+ ++F+G+L P+V++ +L F AFG + +
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSL-SE 141
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D ++G SRG+GF+S+ ++ AI +MNG++L +R I V++A +K
Sbjct: 142 ARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQK 192
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + +VG+L P+V +++L + F G + V D + +GYGF+ FR
Sbjct: 104 QNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRD 163
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+ DA+ AI +N L + IRVN A+Q
Sbjct: 164 KADAEQAIASMNGEWLGSRAIRVNWANQ 191
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G +V + + DR G+ FV+ + ++A AI
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADR------GFAFVKLDTHQNAALAI 309
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGA 112
L ++G+PI+ + +DK S++ GA
Sbjct: 310 THLQNQLVHGRPIKCSWG-KDKGSMEGGA 337
>gi|71993203|ref|NP_001021709.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
gi|3880681|emb|CAA21572.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
Length = 646
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P V E +L+E F AGPV+++ V +D T L GY +V F+ DA+ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N L+GKP+R+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 92 TMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILS-CK 150
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D D G S+G+GF+ +++ EA+ AI+ +NG L +++ V
Sbjct: 151 VAIDED-GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 23/192 (11%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q YV N +E L +LF + G + + V V +G+GFV F + E+A+ A
Sbjct: 211 QFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETA 268
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLD-------------------VGANLFIGNLDPDV 123
++ L+ + G ++++ KKS G NL++ NLD V
Sbjct: 269 VQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETV 328
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F ++G I T+ K+M D + G S+GFGF+ ++ E + +A+ MN + +C++
Sbjct: 329 DDDGLKKQFESYGNI-TSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 386
Query: 184 ITVSYAYKKDTK 195
+ V+ A +K+ +
Sbjct: 387 LYVAIAQRKEDR 398
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D +TG S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 178 VAQD-ETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 227
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D T +GYGFV + ++E A AIK +N
Sbjct: 150 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-TGASKGYGFVHYETDEAASQAIKHVN 208
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ DV E F +G VT
Sbjct: 209 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNIAADVTEDDFRQLFEKYG-DVT 267
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + E++ A++ +N + + + V A KK + E
Sbjct: 268 SSSLARDQE-GKSRGFGFVNFTTHESASKAVDELNNKDFHGQDLYVGRAQKKHEREE 323
>gi|341884731|gb|EGT40666.1| CBN-PAB-2 protein [Caenorhabditis brenneri]
Length = 707
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L VTE +L+E F AGPV+++ V +D + L GY +V F+ DA+ A+
Sbjct: 62 ASLYIGDLHGDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 121
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N ++G+P+R+ + +D + G N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 122 TMNFEIIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILS-CK 180
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D D GNS+G+GF+ +++ ++ AIE +NG L ++++ V
Sbjct: 181 VATDDD-GNSKGYGFVHFETEASAQTAIEKVNGMLLSDKKVFV 222
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+A R + ++ NLD + + +++ F G +++ V D N +GYGFV F +E
Sbjct: 143 AARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILSCKVATDDDGN-SKGYGFVHFETEA 201
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGA----NLFIGNLDPDVDEKLLYD 130
A AI+ +N + L K + V K +Q K L N+F+ N +DE L +
Sbjct: 202 SAQTAIEKVNGMLLSDKKVFVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDEAKLKE 261
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +G I N ++ G +GFGF++Y EA+ A++ +N L ++ +S
Sbjct: 262 MFSKYGEI--NSAVVMTDAEGKPKGFGFVAYADPEAASKAVDDLNESILEGTELKLSVC- 318
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLF 223
+ K ER + A Q+ + L+
Sbjct: 319 RAQKKSERSAELKRKYEALKQERVQRYQGVNLY 351
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 22/187 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V N + E L E+F + G + + V D +G+GFV + E A A+ LN
Sbjct: 246 FVKNFGEHLDEAKLKEMFSKYGEINSAVVMTD-AEGKPKGFGFVAYADPEAASKAVDDLN 304
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-------------------GANLFIGNLDPDVDEKLL 128
L G ++++ KKS G NL++ N++ ++ ++ L
Sbjct: 305 ESILEGTELKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEELTDEGL 364
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F+ FG I T+ K+M D + G S+GFGF+ ++ E + AA+ MN + + + + V+
Sbjct: 365 RAHFAQFGTI-TSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTEMNSKMIGAKPLYVAL 422
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 423 AQRKEDR 429
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q +R Q YV N++ ++T+E L F Q G + + V D +G+GFV F
Sbjct: 337 LKQERVQRYQGVNLYVKNIEEELTDEGLRAHFAQFGTITSAKVMVDE-NGRSKGFGFVCF 395
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ V A +D+++
Sbjct: 396 EKPEEATAAVTEMNSKMIGAKPLYVALAQRKEDRRA 431
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D + GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPVRIMWSQRDPGLRKS-GVG-NVFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRG GF+ +++ EA+ AIE MNG L +R++ V + + + G
Sbjct: 129 KVVC---DENGSRGHGFVHFETQEAATRAIETMNGMLLNDRKVFVGHFKSRKEREAEFGA 185
Query: 202 PA 203
A
Sbjct: 186 RA 187
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +G+GFV F ++E A AI+ +
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIETM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ + GA N++I N D+D+ L + FS FG +
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D +TG S+GFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 219 S-VKVMMD-NTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKR 269
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 160/384 (41%), Gaps = 61/384 (15%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + + L E+F + G ++V V D T +G+GFV F E+A A+ +
Sbjct: 193 VYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDN-TGRSKGFGFVNFEKHEEAQKAVADM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ G+ + V +A Q++ S G NL++ NLD +D++ L
Sbjct: 252 NGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPYGTI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG--------PPSLQNAPQANGTVG 241
+K+ ER + + ++ ++ P S PP Q P+A
Sbjct: 369 QRKE---ERKAILTNQYM--QRLATMRALPGPFLGSFQPPPGYFLPPIPQPQPRAAFYSP 423
Query: 242 GPVPP-RPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQ----------- 289
PV P RP +A S P P AA P ++ + Q
Sbjct: 424 SPVVPVRPATRWSAQPSRSPTYPAATPVLRAAVQPRRLVSNISTMRQASTQVPRLTISSL 483
Query: 290 ----HIGQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPP 345
+IG +P P + P + + AM+ P MG+ PP +Q
Sbjct: 484 LVAANIGTQTVSARVPSS------PTLRGAPHYKYSLAMRNIQP----MGSVPPGAQQVG 533
Query: 346 PPPQQLLGRPPMPHMSMPPPPPPQ 369
P + G+ P+ SM PPQ
Sbjct: 534 EPAVHVQGQEPLT-ASMLAAAPPQ 556
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 54 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 114 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 172
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 173 VAQD-EFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 222
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 145 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKHVN 203
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ NL+P+V + + F +G I T
Sbjct: 204 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEI-T 262
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ + +++ AA+E +N + +++ V A KK + E R
Sbjct: 263 SASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELR 322
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 323 KQHEAARVEKAS 334
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 81/263 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV NL+P+VT E ELF + G + + + +D T
Sbjct: 213 FVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNET 272
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + + A A++ LN + G+ + V +A + +K
Sbjct: 273 GKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEK 332
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL++ NL D+D++ L D F FG I T+ ++MRD
Sbjct: 333 ASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNI-TSARVMRDTISDAGSESEKEKEASKD 391
Query: 148 ---------------------------PDT--------GNSRGFGFISYDSFEASDAAIE 172
PDT G S+GFGF+ + + + + A+
Sbjct: 392 NKENVKEETKKEAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVT 451
Query: 173 AMNGQYLCNRQITVSYAYKKDTK 195
MN + + + + V+ A +KD +
Sbjct: 452 EMNQRMVNGKPLYVALAQRKDVR 474
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 115/185 (62%), Gaps = 7/185 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L GKPIR+ + +D +KS VG N+FI NLD +D K +YDTFS FG I++
Sbjct: 71 TMNYDPLKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKAMYDTFSTFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V + + + G
Sbjct: 128 CKVAQD-ESGTSKGYGFVHFETEEAANKSIDKVNGMLLNGKRVFVGKFIPRKEREKELGE 186
Query: 202 PAERI 206
A+R
Sbjct: 187 KAKRF 191
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 24/188 (12%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYV-PKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +++LL E+F + G + + V KD +G+GFV F E A+ A+
Sbjct: 194 VYVKNFGEDFSDDLLREMFEKYGRITSHKVMSKD--DGKSKGFGFVAFEDPEAAEKAVAS 251
Query: 86 LNMIKLY-GKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKL 127
LN ++ GKP+ V +A + ++ S G NL++ N+D ++D++
Sbjct: 252 LNGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLKMERLSRYQGVNLYVKNIDDNIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + ++ + V+
Sbjct: 312 LRKEFTPFGTI-TSAKVM--LEDGRSKGFGFVCFSSAEEATKAVTEMNGRIVGSKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|448112633|ref|XP_004202146.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359465135|emb|CCE88840.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 625
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 15 GQHSAERNQ----DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
G+ +A+ +Q A+ YVG L+P V E LL+E+F G V ++ V +D VT GY +
Sbjct: 36 GEDAADSSQLPDTSASLYVGELNPSVNEALLFEIFSPVGQVSSIRVCRDAVTKKSLGYAY 95
Query: 71 VEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLY 129
V F ED + AI+ LN + G+P R+ + +D G N+FI NL P +D K L+
Sbjct: 96 VNFHKLEDGEKAIEELNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALH 155
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SY 188
DTFSAFG I++ K+ D + GNS+ FGF+ Y++ EA+ AAIE +NG L +R++ V +
Sbjct: 156 DTFSAFGKILS-CKVATD-EQGNSKCFGFVHYETAEAAKAAIENVNGMLLNDREVYVGKH 213
Query: 189 AYKKD 193
KKD
Sbjct: 214 VSKKD 218
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 62/291 (21%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G+H +++++++ YV N+D +EE + +LF G + ++++ KD
Sbjct: 210 VGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEEMRKLFEPYGKITSLHLEKD-AEG 268
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------- 110
+G+GFV F S E A A++ LN + G+ + V +A + ++ ++
Sbjct: 269 KSKGFGFVNFESHEAAVKAVEELNDKDINGQKLYVGRAQKKRERIEELKRQYEAARLEKL 328
Query: 111 ----GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
G NLF+ NLD +D L + F FG I T+ ++M D + G S+GFGF+ + S E
Sbjct: 329 SKYQGVNLFVKNLDDSIDSVKLEEEFKPFGTI-TSARVMVD-EHGKSKGFGFVCFSSPEE 386
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
+ AI MN + + + V+ A +KD R ++I A N
Sbjct: 387 ATKAITEMNQRMFHGKPLYVALAQRKDV---RRSQLEQQIQARNQ--------------- 428
Query: 227 PPSLQNAPQANGTVGGPVPPRPYA--------NGAASGPISAVRPPPPPPQ 269
+QNA G G +PP Y NG S P P P PQ
Sbjct: 429 -MRMQNAAATGGIPGQFIPPMFYGQQPGFFPPNGRGSAPF-----PGPNPQ 473
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 99/187 (52%), Gaps = 10/187 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S RN + ++ NL P + + L + F G +++ V D N + +GFV + + E
Sbjct: 131 SLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEQGN-SKCFGFVHYETAE 189
Query: 78 DADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYD 130
A AI+ +N + L + + V+K ++ K ++ AN +++ N+D E+ +
Sbjct: 190 AAKAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEEMRK 249
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F +G I T+ + +D + G S+GFGF++++S EA+ A+E +N + + +++ V A
Sbjct: 250 LFEPYGKI-TSLHLEKDAE-GKSKGFGFVNFESHEAAVKAVEELNDKDINGQKLYVGRAQ 307
Query: 191 KKDTKGE 197
KK + E
Sbjct: 308 KKRERIE 314
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L + FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L ELF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NVFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DDHGSRGFGFVHFETHEAAQNAIRTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI+ +
Sbjct: 101 VFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAQNAIRTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG I+
Sbjct: 159 NGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLHVDVDERCLQDLFSQFGKIL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRD D+G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 219 S-VKVMRD-DSGHSRGFGFVNFEKHEDAQKAVTDMNGKEVSGRLLYVGRAQKR 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 41/267 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E L +LF Q G +++V V +D + +G+GFV F EDA A+ +N
Sbjct: 194 YVKNLHVDVDERCLQDLFSQFGKILSVKVMRDD-SGHSRGFGFVNFEKHEDAQKAVTDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G+I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFAPYGMI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
+K+ ER N Q R T+ A G P L + Q P P+P A
Sbjct: 370 RKE----------ERKAILTNQYIQ--RLSTMRALGSPLLGSLQQPTSYF-LPAVPQPPA 416
Query: 251 NG--AASGPISAVRPPPPPPQAAAFPP 275
ASGP P PPP+ A PP
Sbjct: 417 QSPYYASGP-----PVQPPPRWTAQPP 438
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 104/165 (63%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 104 QLNYSSIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS-CK 162
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D + G S+G+GF+ Y++ EA++ AI+A+NG L ++++ V Y
Sbjct: 163 VATD-EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGY 206
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q YV N DP+VTEE LF Q G V + + +D +G+GFV F ++A
Sbjct: 221 KAQFTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDD-EGRSRGFGFVNFEVHDEAQ 279
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A++ L+ + GK + V++A + +K S G NL+I NL+ D+
Sbjct: 280 KAVEGLHDLDFKGKKLFVSRAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDL 339
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F FG I T+ K+MRD + G S+GFGF+ + S + + A+ MN + + +
Sbjct: 340 DDDRLRTEFEPFGSI-TSAKVMRD-EKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKP 397
Query: 184 ITVSYAYKKDTK 195
+ VS A ++D +
Sbjct: 398 LYVSLAQRRDVR 409
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D +GYGFV + + E A+ AIK +N
Sbjct: 135 FIKNLDEQIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAVN 193
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A N+++ N DP+V E+ F FG VT
Sbjct: 194 GMLLNDKKVYVGYHISRKERQSKLEEMKAQFTNIYVKNFDPEVTEEEFMALFQQFGS-VT 252
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ I RD D G SRGFGF++++ + + A+E ++ +++ VS A KK
Sbjct: 253 SAVIQRD-DEGRSRGFGFVNFEVHDEAQKAVEGLHDLDFKGKKLFVSRAQKK 303
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
A+L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + + A+
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGERAL 102
Query: 172 EAMNGQYLCNRQITVSYA 189
E +N + R + ++
Sbjct: 103 EQLNYSSIKGRACRIMWS 120
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VT+ L++LF Q G VV+V V +D T GYG+V + + DA A++
Sbjct: 38 TSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAME 97
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN + GK IRV + +D G AN+FI NLD +D K L+DTFS+FG I++ K
Sbjct: 98 MLNFTPVNGKSIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILS-CK 156
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
I D + G S+G+GF+ YD+ E++ AI+ +NG + ++Q+ V + +K ER T
Sbjct: 157 IATDSN-GQSKGYGFVQYDNEESAQGAIDKLNGMLMNDKQVYVGHFLRKQ---EREST 210
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 20/186 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL T++ L ++F + G + + V +D + +GF+ F + EDA A++ L
Sbjct: 219 VYVKNLSESTTDDELKKVFGEFGNITSAVVMRD-ADGKSKCFGFINFETAEDAAKAVESL 277
Query: 87 NMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLDPDVDEKLLY 129
N K K V KA + K+++D G NL++ NLD +D++ L
Sbjct: 278 NGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLK 337
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS FG I T+ K+MRDP +G SRG GF+++ + E + A+ MNG+ + ++ + V+ A
Sbjct: 338 ELFSEFGTI-TSCKVMRDP-SGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALA 395
Query: 190 YKKDTK 195
+K+ +
Sbjct: 396 QRKEER 401
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ Q YV NLD + +E L ELF + G + + V +D + + +G GFV F +
Sbjct: 311 KEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDP-SGISRGSGFVAFST 369
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 370 SEEASRALSEMNGKMIVSKPLYVALAQRKEE 400
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 54 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 114 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 172
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 173 VAQD-EFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 222
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 145 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKHVN 203
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ NL+P+V + + F +G I T
Sbjct: 204 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEI-T 262
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ + +++ AA+E +N + +++ V A KK + E R
Sbjct: 263 SASLSRDNETGKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELR 322
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 323 KQHEAARVEKAS 334
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 81/263 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV NL+P+VT E ELF + G + + + +D T
Sbjct: 213 FVGHHIAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNET 272
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F + + A A++ LN + G+ + V +A + +K
Sbjct: 273 GKSRGFGFVNFVNHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEK 332
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL++ NL D+D++ L D F FG I T+ ++MRD
Sbjct: 333 ASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNI-TSARVMRDTIGDAGSESEKEKEASKD 391
Query: 148 ---------------------------PDT--------GNSRGFGFISYDSFEASDAAIE 172
PDT G S+GFGF+ + + + + A+
Sbjct: 392 NKENVREETKKEAGGEDSAEKTDKAEKPDTKKPTDKKLGKSKGFGFVCFSNPDEASKAVT 451
Query: 173 AMNGQYLCNRQITVSYAYKKDTK 195
MN + + + + V+ A +KD +
Sbjct: 452 EMNQRMVNGKPLYVALAQRKDVR 474
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 129 KVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH-FK--SRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AG ++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGQPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 165/381 (43%), Gaps = 54/381 (14%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N ++ +E L ELF + G +++ V D +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ GK + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTKGERHGTP--AERILAAN---NPS---SQKSRPHTLFASGPPSLQNAPQ---ANG 238
+K+ + + H T +R+ + NP Q + P F + P QN A G
Sbjct: 369 QRKEER-QAHLTNQYMQRMASVRAVPNPVINPYQAAPPSGYFMAAIPQAQNRAAYYPAAG 427
Query: 239 TVG----GP------VPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQP 288
+ GP V P+ + N SG I RP P PQ F ++ + Q
Sbjct: 428 QMAQLRPGPRWTTQNVRPQHFQN--MSGGI---RPSGPRPQ--TFSTVRPSSQVPRMMTT 480
Query: 289 QHIGQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPP 348
Q +GQ + P P P PQ A PQ M QP V Q P
Sbjct: 481 QRVGQSTDTTMGPRPATAAAAAATPVRGVPQYKYAAGVRNPQQ-HMNTQPQVTMQQPAVH 539
Query: 349 QQLLGRPPMPHMSMPPPPPPQ 369
Q G+ P+ SM PPQ
Sbjct: 540 VQ--GQEPLT-ASMLAAAPPQ 557
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N ++D++ L + FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D + G SRGFGF+S++ E + A++ MNG+ + + + V A KK
Sbjct: 220 -IRVMTD-ENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKK 269
>gi|341900148|gb|EGT56083.1| hypothetical protein CAEBREN_04295 [Caenorhabditis brenneri]
Length = 649
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P V E +L+E F AGPV+++ V +D T L GY +V F+ DA+ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N L+GKP+R+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 92 TMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILS-CK 150
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + G+S+G+GF+ +++ EA+ AI+ +NG L +++ V
Sbjct: 151 VAIDEE-GSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 31/204 (15%)
Query: 19 AERNQD--------ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
A+RN++ YV N +E L +LF + G + + V +G+GF
Sbjct: 199 AQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTITSCDVMTS--DGKSKGFGF 256
Query: 71 VEFRSE---------------EDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV----G 111
V F E +D + V K + + K + K + G
Sbjct: 257 VAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQG 316
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
NL++ NLD VD++ L F +FG I T+ K+M D + G S+GFGF+ ++ E + A+
Sbjct: 317 VNLYVKNLDESVDDEALKKQFESFGNI-TSAKVMTD-ENGRSKGFGFVCFEKPEEATTAV 374
Query: 172 EAMNGQYLCNRQITVSYAYKKDTK 195
MN + +C++ + V+ A +K+ +
Sbjct: 375 TEMNSKMVCSKPLYVALAQRKEDR 398
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYV 171
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 38/203 (18%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + +++ F G +++ V +D + +GYGFV F +EE A+ +I +
Sbjct: 101 VFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDE-SGASKGYGFVHFETEEAANKSIDKV 159
Query: 87 NMIKLYGKPIRVNK----ASQDK--------------KSLDV----------------GA 112
N + L GK + V K ++K K+ ++ G
Sbjct: 160 NGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFELKRKFEQLKIERLNRYQGV 219
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
NL++ NLD +D++ L F+ FG I T+ K+M + G S+GFGF+ + E + A+
Sbjct: 220 NLYVKNLDDTIDDERLRKEFTPFGTI-TSAKVMMEE--GRSKGFGFVCFSQPEEATKAVT 276
Query: 173 AMNGQYLCNRQITVSYAYKKDTK 195
MNG+ + ++ + V+ A +K+ +
Sbjct: 277 EMNGRIVGSKPLYVALAQRKEDR 299
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q YV NLD + +E L + F G + + V + +G+GFV F E+A
Sbjct: 215 RYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE--GRSKGFGFVCFSQPEEAT 272
Query: 81 YAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
A+ +N + KP+ V A +D+K+
Sbjct: 273 KAVTEMNGRIVGSKPLYVALAQRKEDRKA 301
>gi|780291|gb|AAA65224.1| polyadenylate-binding protein [Caenorhabditis elegans]
Length = 646
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P V E +L+E F AGPV+++ V +D T L GY +V F+ DA+ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N L+GKP+R+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 92 TMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILS-CK 150
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D D G S+G+GF+ +++ EA+ AI+ +NG L +++ V
Sbjct: 151 VAIDED-GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q YV N +E L ++F + G + + V V +G+GFV F + E+A+ A
Sbjct: 211 QFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETA 268
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLD-------------------VGANLFIGNLDPDV 123
++ L+ + G ++++ KKS G NL++ NLD V
Sbjct: 269 VQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETV 328
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F ++G I T+ K+M D + G S+GFGF+ ++ E + +A+ MN + +C++
Sbjct: 329 DDDGLKKQFESYGNI-TSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKP 386
Query: 184 ITVSYAYKKDTK 195
+ V+ +K+ +
Sbjct: 387 LYVAIGQRKEDR 398
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 3/189 (1%)
Query: 15 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
G + R +A+ YVG+LD + E L++LF Q PV+++ V +D+ GY +V F
Sbjct: 463 GTYCGGRFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFA 522
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFS 133
S +DA A++ LN L GKPIR+ + +D G AN+FI NLDP +D K L DTF+
Sbjct: 523 SPQDATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFA 582
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
AFG +++ KI D + G S+G+GF+ ++ EA+ AI+ +NG + ++Q+ V +
Sbjct: 583 AFGTVLS-CKIALD-NNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQ 640
Query: 194 TKGERHGTP 202
+ +G+P
Sbjct: 641 ERNRGNGSP 649
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL T++ L +F + G + + V +D + + + +GFV F+S + A A++ L
Sbjct: 654 VYVKNLSETTTDDDLKNIFGKYGSITSAVVMRD-ASGMSKCFGFVNFQSSDSAAAAVEHL 712
Query: 87 N-------MIKLYGKPIRVN--------KASQDKKSLD---VGANLFIGNLDPDVDEKLL 128
N + GK R + K Q++K+ G NL++ NLD V+++ L
Sbjct: 713 NGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKL 772
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG I T+ K+M DP G S+G GF+++ + E + A+ MNG+ + + + V+
Sbjct: 773 KELFSEFGTI-TSCKVMLDPQ-GLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAV 830
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 831 AQRKEERKAR 840
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ + Y+ NLD V +E L ELF + G + + V D L +G GFV F + E+A
Sbjct: 751 EKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLD-PQGLSKGSGFVAFLTPEEA 809
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+ V+N + KP+ V A + ++
Sbjct: 810 TRALNVMNGKMIGRKPLYVAVAQRKEE 836
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD VT+ L++LF Q G VV+V V +D T GYG+V + + +DA A+ V
Sbjct: 32 SLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 91
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L KP+R+ + +D G AN+FI NLD +D K L+DTFS+FG I++ K+
Sbjct: 92 LNFTPLNNKPLRIMYSHRDPSIRKSGMANIFIKNLDKTIDHKALHDTFSSFGNILS-CKV 150
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
D +G S+G+GF+ +DS EA+ AI+ +NG + ++Q+ V +K +
Sbjct: 151 ATDA-SGQSKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYVGNFLRKQER 200
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 19/187 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL T+E L +F + G + + V +D + +GFV F + +DA A++ LN
Sbjct: 213 YVKNLAESTTDEDLKSIFEEHGAITSAVVMRD-ADGKSKCFGFVNFENVDDAAKAVEALN 271
Query: 88 MIKLYGKPIRVNKA-SQDKKSLDV---------------GANLFIGNLDPDVDEKLLYDT 131
K K V KA + ++ L++ NL+I NLD V+++ L +
Sbjct: 272 GKKFDDKEWYVGKAQKKSERELELKGRFEQSLESVEKYQAVNLYIKNLDDSVNDEKLKEL 331
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS FG I T+ K+M DP +G SRG GF+++ + E + A+ +NG+ + ++ + V+ A +
Sbjct: 332 FSDFGTI-TSCKVMHDP-SGISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQR 389
Query: 192 KDTKGER 198
K+ + R
Sbjct: 390 KEERRAR 396
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A ++ NLD + + L + F G +++ V D + +GYGFV+F SEE A AI
Sbjct: 119 ANIFIKNLDKTIDHKALHDTFSSFGNILSCKVATD-ASGQSKGYGFVQFDSEEAAQNAID 177
Query: 85 VLNMIKLYGKPIRV----NKASQDKKSLDVGAN-LFIGNLDPDVDEKLLYDTFSAFGVIV 139
LN + + K + V K +D ++ N +++ NL ++ L F G I
Sbjct: 178 KLNGMLINDKQVYVGNFLRKQERDSALSNIKFNNIYVKNLAESTTDEDLKSIFEEHGAI- 236
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
T+ +MRD D G S+ FGF+++++ + + A+EA+NG+ +++ V A KK +
Sbjct: 237 TSAVVMRDAD-GKSKCFGFVNFENVDDAAKAVEALNGKKFDDKEWYVGKAQKKSER 291
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
S E+ Q Y+ NLD V +E L ELF G + + V D + + +G GFV F +
Sbjct: 304 ESVEKYQAVNLYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDP-SGISRGSGFVAFSTP 362
Query: 77 EDADYAIKVLNMIKLYGKPIRV 98
E+A A+ LN + KP+ V
Sbjct: 363 EEASRALAELNGKMVVSKPLYV 384
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 62 TMNFDLIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 118
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D + GNS+G+GF+ +++ E+++ +IE +NG L +++ V
Sbjct: 119 CKVAQD-EKGNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVFV 162
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 102/187 (54%), Gaps = 23/187 (12%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N ++T+E L E+F + G + + V N +G+GFV F + E A+ A++ L
Sbjct: 185 VYVKNFGDELTDESLKEMFEKYGTITSHRVMIKE--NKSRGFGFVAFENPESAEVAVQEL 242
Query: 87 NMIKL-YGKPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
N +L GK + V +A ++++ +++ G NL++ NLD +D++ L
Sbjct: 243 NGKELGDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDERL 302
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
FS FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + ++ + V+
Sbjct: 303 RKEFSPFGTI-TSAKVM--LEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVAL 359
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 360 AQRKEDR 366
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 105/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LD VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 55 ASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 174 VAQD-EFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 223
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKHVN 204
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ NLD +V + + F +G I T
Sbjct: 205 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVTNEEFRELFGKYGDI-T 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ I D +TG SRGFGF+++ E++ AA+E +N + +++ V A KK + E R
Sbjct: 264 SASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELR 323
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 324 KQHEAARVEKAS 335
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 79/261 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV NLD +VT E ELF + G + + + D T
Sbjct: 214 FVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSET 273
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN + G+ + V +A + +K
Sbjct: 274 GKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEK 333
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL++ NL D+D++ L D F FG I T+ ++MRD
Sbjct: 334 ASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNI-TSARVMRDTIADAGSESEKEKEISNK 392
Query: 148 ---------------------------------PDTGNSRGFGFISYDSFEASDAAIEAM 174
G S+GFGF+ + + + + A+ M
Sbjct: 393 ENVKEEAKKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEM 452
Query: 175 NGQYLCNRQITVSYAYKKDTK 195
N + + + + V+ A +KD +
Sbjct: 453 NQRMVNGKPLYVALAQRKDVR 473
>gi|268566587|ref|XP_002639761.1| C. briggsae CBR-PAB-1 protein [Caenorhabditis briggsae]
Length = 651
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P V E +L+E F AGPV+++ V +D T L GY +V F+ DA+ A+
Sbjct: 32 ASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N L+GKP+R+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 92 TMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILS-CK 150
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + G+S+G+GF+ +++ EA+ AI+ +NG L +++ V
Sbjct: 151 VAIDEE-GSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 136/331 (41%), Gaps = 60/331 (18%)
Query: 19 AERNQD--------ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
A+RN++ YV N ++ L +LF + G + + V + +G+GF
Sbjct: 199 AQRNRELGETAKKFTNVYVKNFGEHYNKDTLEKLFAKYGTITSCDVMTSEGKS--KGFGF 256
Query: 71 VEFRSE---------------EDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV----G 111
V F E +D + V K + + K + K + G
Sbjct: 257 VAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQG 316
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
NL++ NLD VD++ L F +FG I T+ K+M D + G S+GFGF+ ++ E + A+
Sbjct: 317 VNLYVKNLDESVDDEALKKQFESFGNI-TSAKVMTD-ENGRSKGFGFVCFEKPEEATTAV 374
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
MN + +C++ + V+ A +K+ + + + + LA+ R HT
Sbjct: 375 SEMNSKMVCSKPLYVALAQRKEDRRAQLASQYMQRLAS-------MRMHT---------- 417
Query: 232 NAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHI 291
N P G + P P P + P+ R PQ A P + Q + Q Q++
Sbjct: 418 NVP--GGGMYSPAQPGP--GYYVANPMQQQRNFVGGPQLAR-PGGRWGPQNQYPVQSQYM 472
Query: 292 ---GQGVPQPVMPPPMQFRPPPNMPPPPPPQ 319
G GV Q M P + P PPQ
Sbjct: 473 MAQGPGVYQNRMGRPQNQQGGPR----GPPQ 499
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L P VTE +L+E F AGP++++ V +D T Y ++ F+ DA+ A+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NVFIKNLDESIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
+ D SRG+GF+ +++ EA++ AI+ MNG L +R++ V + + + +G
Sbjct: 129 KVVC---DEHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYG 184
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D + +GYGFV F + E A+ AI+ +
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGS--RGYGFVHFETHEAANRAIQTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ L+ GA N++I N D+D+K L + FSAFG +
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D D+G SRGFGF++Y + E + A+ MNG+ + R I V A K+
Sbjct: 219 S-VKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 21/197 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++ A+ + Y+ N + ++ L E+F G ++V V D + +G+GFV + +
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGN 240
Query: 76 EEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDV----------GANLFIGN 118
E+A A+ +N ++ G+ I R+ + S+ K+ + G NL++ N
Sbjct: 241 HEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKN 300
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD +D+ L F +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+
Sbjct: 301 LDDGIDDDRLRKEFLPYGTI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 179 LCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 358 VSTKPLYVALAQRKEER 374
>gi|388582290|gb|EIM22595.1| polyadenylate binding protein [Wallemia sebi CBS 633.66]
Length = 637
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + +D + A
Sbjct: 36 QSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNLQDGERA 95
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
++ LN + + R+ + +D G N+FI NLD +D K L+DTF+AFG +++
Sbjct: 96 LEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLS- 154
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ D + GNSRG+GF+ Y++ E++ AAI+ +NG L ++++ V + K +
Sbjct: 155 CKVATD-ENGNSRGYGFVHYENGESASAAIQHVNGMLLNDKKVYVGHHVSKKER 207
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 106/193 (54%), Gaps = 20/193 (10%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+++Q ++ NLD V +E ++ G +++ V KD N +G+GFV +++ E+A
Sbjct: 214 QKSQFTNVFIKNLDVSVDDEKFKQILEPYGEILSAVVQKDEQGN-SRGFGFVNYKNHEEA 272
Query: 80 DYAIKVLNMIKLYGKPI---RVNKASQDKKSLD--------------VGANLFIGNLDPD 122
A++ LN +++ GK I R K ++ ++ L G NL++ NLD D
Sbjct: 273 AKAVESLNEVEVDGKKIFAARAQKKNEREEELRRNYEQAKLEKLAKYAGVNLYVKNLDDD 332
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
D++ L F FG I T+ KIMRD + G S+GFGF+ + S + + A+ ++G+ + ++
Sbjct: 333 FDDERLVGEFEPFGTI-TSAKIMRD-EKGTSKGFGFVCFSSPDEATKAVSELSGKMIGSK 390
Query: 183 QITVSYAYKKDTK 195
+ VS A ++D +
Sbjct: 391 PLYVSLAQRRDVR 403
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G V++ V D N +GYGFV + + E A AI+ +N
Sbjct: 129 FIKNLDEAIDNKALHDTFAAFGNVLSCKVATDENGN-SRGYGFVHYENGESASAAIQHVN 187
Query: 88 MIKLYGKPIRV-NKASQDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + S+ ++ + N+FI NLD VD++ +G I++
Sbjct: 188 GMLLNDKKVYVGHHVSKKERQAKIDEQKSQFTNVFIKNLDVSVDDEKFKQILEPYGEILS 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+++ + GNSRGFGF++Y + E + A+E++N + ++I + A KK+ + E
Sbjct: 248 --AVVQKDEQGNSRGFGFVNYKNHEEAAKAVESLNEVEVDGKKIFAARAQKKNEREE 302
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AG ++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGQPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N ++ +E L ELF + G +++ V D +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ GK + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPFGTI-TSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N ++D++ L + FS +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D + G SRGFGF+S++ E + A++ MNG+ + + + V A KK
Sbjct: 220 -IRVMTD-ENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKK 269
>gi|400260922|pdb|4F02|A Chain A, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
gi|400260925|pdb|4F02|D Chain D, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
Length = 213
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 16 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 76 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 133
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 134 KVVC---DENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 187
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 113/180 (62%), Gaps = 9/180 (5%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRS 75
AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 11 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMD 68
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++++L F
Sbjct: 69 MRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAF 128
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
SAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 129 SAFGTM-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 187
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 43/201 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+V +E+L + F G + + V D + +GYGF+ FR + DA+ AI +N
Sbjct: 111 FVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN 170
Query: 88 MIKLYGKPIRVNKASQDKK----------------------------SLD--------VG 111
L + IRVN A+Q + S D
Sbjct: 171 GEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYDSVVQQTPSYN 230
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+ +++GNL P + L F + G + +I D RGF F+ D+ E + AI
Sbjct: 231 STVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD----RGFAFVKLDTHEHAAMAI 283
Query: 172 EAMNGQYLCNRQITVSYAYKK 192
+ GQ + R I S+ +
Sbjct: 284 VQLQGQMVHGRPIKCSWGKDR 304
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG---FGFISYDSFEASD 168
A+L++GNL P V E +L + F+ G V + KI+ PD G +GF+ Y A++
Sbjct: 17 AHLYVGNLSPRVTEYMLTEIFAVAGP-VQHVKII--PDRNYQHGGLNYGFVEYMDMRAAE 73
Query: 169 AAIEAMNGQYLCNRQITVSYAY-----KKDTKGERH----------------------GT 201
A++ +NG+ + + +I V++AY K+DT G H GT
Sbjct: 74 TALQTLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGT 133
Query: 202 PAE-RILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPR-PYANGAASGPIS 259
++ R++ N + F + Q NG G R +AN G ++
Sbjct: 134 MSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVA 193
Query: 260 AVRPPPPPPQAAAFPPMQVAG 280
PP P A P+ G
Sbjct: 194 VASPPRPGATGGAPAPINFQG 214
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
++T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 230 NSTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADR------GFAFVKLDTHEHAAMAI 283
Query: 84 KVLNMIKLYGKPIRVN 99
L ++G+PI+ +
Sbjct: 284 VQLQGQMVHGRPIKCS 299
>gi|260944998|ref|XP_002616797.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
gi|238850446|gb|EEQ39910.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 109/173 (63%), Gaps = 8/173 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG L+P V E +L+E+F G V ++ V +D VT GY +V + ED + A++
Sbjct: 51 ASLYVGELNPSVNEAVLYEIFSPLGQVSSIRVCRDAVTKKSLGYAYVNYHKHEDGERALE 110
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN + G+P R+ + +D +++ D N+FI NL PD+D K L+DTFSAFG I++
Sbjct: 111 QLNYSLIDGRPCRIMWSQRDPSLRRNGD--GNIFIKNLHPDIDNKALHDTFSAFGRILS- 167
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKD 193
K+ D + G S+ FGF+ Y++ EA+DAAIE +NG L +R++ V + KKD
Sbjct: 168 CKVATD-EHGRSKCFGFVHYETAEAADAAIENVNGMSLNDREVFVGKHISKKD 219
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 30/210 (14%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G+H +++++ A +V N TE L +F G + ++Y KD
Sbjct: 210 FVGKHISKKDRVAKFEEMKANFTNVFVKNFGSDFTEAELAAMFEPYGKITSLYFEKDS-E 268
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------ 110
+G+GF+ F + + A A++ LN ++ G+ I V +A + ++ ++
Sbjct: 269 GKSKGFGFINFENHDAAVKAVEELNDKEVNGQKIYVGRAQKKRERIEELKKQYETTRLEK 328
Query: 111 -----GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
G NLF+ NLD + ++L + F FG I T+ K+M D +TG S+GFGF+ + + E
Sbjct: 329 LSKYQGVNLFVKNLDDSLTSEMLEEEFKPFGTI-TSAKVMVD-ETGKSKGFGFVCFSAPE 386
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ AI MN + + + + V+ A +KD +
Sbjct: 387 EATKAITEMNQRMVLGKPLYVALAQRKDVR 416
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 102 SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISY 161
SQ + A+L++G L+P V+E +LY+ FS G V++ ++ RD T S G+ +++Y
Sbjct: 41 SQGESVAVTSASLYVGELNPSVNEAVLYEIFSPLGQ-VSSIRVCRDAVTKKSLGYAYVNY 99
Query: 162 DSFEASDAAIEAMN 175
E + A+E +N
Sbjct: 100 HKHEDGERALEQLN 113
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 109/179 (60%), Gaps = 8/179 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L P VTE +L+E F AGP++++ V +D T Y ++ F+ DA+ A+
Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NVFIKNLDESIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
+ D SRG+GF+ +++ EA++ AI+ MNG L +R++ V + + + +G
Sbjct: 129 KVVC---DEHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYG 184
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D + +GYGFV F + E A+ AI+ +
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGS--RGYGFVHFETHEAANRAIQTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ L+ GA N++I N D+D+K L + FSAFG +
Sbjct: 159 NGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D D+G SRGFGF++Y + E + A+ MNG+ + R I V A K+
Sbjct: 219 S-VKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 101/197 (51%), Gaps = 21/197 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++ A+ + Y+ N + ++ L E+F G ++V V D + +G+GFV + +
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGN 240
Query: 76 EEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDV----------GANLFIGN 118
E+A A+ +N ++ G+ I R+ + S+ K+ + G NL++ N
Sbjct: 241 HEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKN 300
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD +D+ L F +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+
Sbjct: 301 LDDGIDDDRLRKEFLPYGTI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRI 357
Query: 179 LCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 358 VSTKPLYVALAQRKEER 374
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N A+ YVG LDP V+E LL+++F G V ++ V +D +T GY +V F E
Sbjct: 40 NVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKT 99
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
AI+ LN + G+P R+ + +D G+ N+FI NL PD+D K LY+TFS FG I++
Sbjct: 100 AIEKLNYTAIKGRPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKTLYETFSVFGNILS 159
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKD 193
KI D +TG S+GFGF+ +++ EA+ AI+A+NG L +++ V+ + KKD
Sbjct: 160 -CKIAND-ETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVAPHVSKKD 211
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NLD + TEE LF G + +V + KD +G+GFV+F + EDA A++ L
Sbjct: 226 VYVKNLDLEATEEDFENLFKPYGTITSVALEKD-AEGKSRGFGFVDFENHEDAVKAVEAL 284
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLY 129
N + G+ + V +A + + L G NLFI NLD +D++ L
Sbjct: 285 NDTEYKGQTLYVGRAQKKYERLQELKKQYQASKLEKLAKYQGINLFIKNLDDSIDDEKLK 344
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ FG I T+ ++MR + G S+GFGF+ + + E + AI N Q + + + V+ A
Sbjct: 345 EEFAPFGTI-TSARVMR-TENGKSKGFGFVCFSTPEEATRAITEKNQQIVAGKPLYVAIA 402
Query: 190 YKKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 403 QRKDV---RRSQLAQQIQARNQMRYQQ 426
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 105/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LD VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 55 ASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 174 VAQD-EFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 223
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKHVN 204
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ NLD V + + F +G I T
Sbjct: 205 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTKVTNEEFRELFGKYGDI-T 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ I D +TG SRGFGF+++ E++ AA+E +N + +++ V A KK + E R
Sbjct: 264 SASITHDSETGKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELR 323
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 324 KQHEAARVEKAS 335
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 79/261 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV NLD +VT E ELF + G + + + D T
Sbjct: 214 FVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSET 273
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN + G+ + V +A + +K
Sbjct: 274 GKSRGFGFVNFVKHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEK 333
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL++ NL D+D++ L D F FG I T+ ++MRD
Sbjct: 334 ASKYQGVNLYVKNLTDDIDDEKLRDLFIGFGNI-TSARVMRDTIADAGSESEKEKEISNK 392
Query: 148 ---------------------------------PDTGNSRGFGFISYDSFEASDAAIEAM 174
G S+GFGF+ + + + + A+ M
Sbjct: 393 ENVKEEAKKESAEEESSDKSDKAEKSDSKKTLEKKLGKSKGFGFVCFSNPDEASKAVTEM 452
Query: 175 NGQYLCNRQITVSYAYKKDTK 195
N + + + + V+ A +KD +
Sbjct: 453 NQRMVNGKPLYVALAQRKDVR 473
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 DLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 174 VAQD-EFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 223
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAATNAIKHVN 204
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ NLD +V + + F +G I T
Sbjct: 205 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEI-T 263
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ I RD +TG SRGFGF + E++ AA+E +N + +++ V A KK + E R
Sbjct: 264 SASISRDGETGKSRGFGFFYFLKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELR 323
Query: 199 HGTPAERILAAN 210
A R+ A+
Sbjct: 324 KQHEAARVEKAS 335
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 79/261 (30%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV NLD +V+ E ELF + G + + + +D T
Sbjct: 214 FVGHHIAKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGET 273
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GF F E A A++ LN + G+ + V +A + +K
Sbjct: 274 GKSRGFGFFYFLKHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEK 333
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD------------------ 147
S G NL++ NL D+D++ L D F +FG I T+ ++MRD
Sbjct: 334 ASKYQGVNLYVKNLTDDIDDEKLRDLFISFGNI-TSARVMRDTAGDPGSESEKEKESANK 392
Query: 148 ---------------------------------PDTGNSRGFGFISYDSFEASDAAIEAM 174
G S+GFGF+ + + + + A+ M
Sbjct: 393 ENVKDEAKKESGEEDSADKSDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEM 452
Query: 175 NGQYLCNRQITVSYAYKKDTK 195
N + + + + V+ A +KD +
Sbjct: 453 NQRMVNGKPLYVALAQRKDVR 473
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Query: 2 TTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRV 61
T+ P A G+ S A+ YVG L+P V E L+E+F G V ++ V +D V
Sbjct: 44 TSSSVPADSAEEQGESSGIAENSASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAV 103
Query: 62 TNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGN 118
+ GY +V + ED + AI+ LN + G+P R+ + +D ++S D N+FI N
Sbjct: 104 SKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGD--GNIFIKN 161
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
L P +D K L+DTFSAFG I++ K+ D D G S+ FGF+ Y++ EA+ AAIE++NG
Sbjct: 162 LHPAIDNKALHDTFSAFGKILS-VKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGML 219
Query: 179 LCNRQITV-SYAYKKD 193
L +R++ V + KKD
Sbjct: 220 LNDREVYVGKHVSKKD 235
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 148/343 (43%), Gaps = 79/343 (23%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G+H +++++++ YV N+D TE+ ELF G + ++Y+ KD
Sbjct: 227 VGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKD-AEG 285
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------- 110
+G+GFV F E A A++ LN ++ G+ I V +A + ++ +
Sbjct: 286 KSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKL 345
Query: 111 ----GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
G NLF+ NLD +D + L + F FG I T+ K+M D D G S+GFGF+ + + E
Sbjct: 346 SKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTI-TSSKVMVD-DAGKSKGFGFVCFSTPEE 403
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
+ AI MN + + + + V+ A +KD R ++I A N
Sbjct: 404 ATKAITEMNQRMVNGKPLYVALAQRKDV---RRSQLEQQIQARNQ--------------- 445
Query: 227 PPSLQNAPQANGTVGGPVPPRPYA-------NGAASGPISAVRPPPPPPQAAAFPPMQVA 279
+QNA A G G +PP Y NG + P P P PQ M+
Sbjct: 446 -MRMQNAAAAGGLPGQFMPPMFYGQQGFFPPNGRGNAPF-----PGPNPQMM----MRGR 495
Query: 280 GQ---AAW-----QGQPQHIGQGVPQPVMPPPMQFRPPPNMPP 314
GQ W GQP VP MPP Q NM P
Sbjct: 496 GQPFPEQWPRPGPNGQP------VPVYGMPPQFQDFNGQNMRP 532
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA R+ D ++ NL P + + L + F G +++V V D + + +GFV + +EE
Sbjct: 148 SARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQ-SKCFGFVHYETEE 206
Query: 78 DADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYD 130
A AI+ +N + L + + V+K ++ K ++ AN +++ N+D EK +
Sbjct: 207 AAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEE 266
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ + +D + G S+GFGF++++ EA+ A+E +N + + ++I V A
Sbjct: 267 LFAPFGKI-TSIYLEKDAE-GKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQ 324
Query: 191 KKDTKGE 197
KK + E
Sbjct: 325 KKRERTE 331
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NVFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DDHGSRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R A N
Sbjct: 183 LGARATAFTN 192
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 25/201 (12%)
Query: 16 QHSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ AE ATA YV NL V E L +LF Q G +++V V +D + +G+GFV
Sbjct: 178 EREAELGARATAFTNIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFV 236
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANL 114
F E+A A+ +N +++ G+ + V +A QD+ + G NL
Sbjct: 237 NFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLNRCQGVNL 296
Query: 115 FIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAM 174
++ NLD +D++ L FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ M
Sbjct: 297 YVKNLDDSIDDEKLRKEFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEM 353
Query: 175 NGQYLCNRQITVSYAYKKDTK 195
NG+ + + + V+ A +K+ +
Sbjct: 354 NGRIIGTKPLYVALAQRKEER 374
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 14/187 (7%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +
Sbjct: 101 VFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAQQAISTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ ++GA N+++ NL VDE+ L D FS FG ++
Sbjct: 159 NGMLLNDRKVFVGHFKSRREREAELGARATAFTNIYVKNLPGHVDERGLQDLFSQFGKML 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ K+MRD D+G+SRGFGF++++ E + A+ MNG + R + V A K +GER
Sbjct: 219 S-VKVMRD-DSGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQK---RGERQ 273
Query: 200 GTPAERI 206
R
Sbjct: 274 NELKRRF 280
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +++E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 45 ASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERALE 104
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF AFG +++ K
Sbjct: 105 QLNYSLIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLS-CK 163
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + G S+G+GF+ Y++ EA++ AI+A+NG L ++++ V
Sbjct: 164 VATD-EQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYV 205
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q Y+ NLD +VT+E ELF + G V + V D +G+GFV + S E+A
Sbjct: 222 KAQFTNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDD-EGRSKGFGFVNYESHEEAQ 280
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ L+ L GK + V +A + +K S G NL++ NL+ DV
Sbjct: 281 AAVDNLHDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLEDDV 340
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F FG I T+ K+M D + G+S+GFGF+ + S + + AI MN + + ++
Sbjct: 341 DDDKLRAEFEPFGTI-TSCKVMSD-EKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKP 398
Query: 184 ITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 399 LYVSLAQRREVR 410
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 98/177 (55%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + FV G V++ V D +GYGFV + + E A+ AIK +N
Sbjct: 136 FIKNLDEQIDNKALHDTFVAFGNVLSCKVATDE-QGRSKGYGFVHYETAEAAETAIKAVN 194
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + + K ++ A NL+I NLD +V ++ + F+ +G + +
Sbjct: 195 GMLLNDKKVYVGPHIPRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVTS 254
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I++ D G S+GFGF++Y+S E + AA++ ++ L +++ V+ A KK + E
Sbjct: 255 --AIVQVDDEGRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQKKAEREE 309
>gi|6137350|pdb|1CVJ|A Chain A, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137351|pdb|1CVJ|B Chain B, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137352|pdb|1CVJ|C Chain C, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137353|pdb|1CVJ|D Chain D, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137354|pdb|1CVJ|E Chain E, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137355|pdb|1CVJ|F Chain F, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137356|pdb|1CVJ|G Chain G, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137357|pdb|1CVJ|H Chain H, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
Length = 190
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVV---CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 4/173 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D +T GY +V + + D + A++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAITRRSLGYAYVNYNTTVDGEKALE 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTK 195
+ +D ++G S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD +
Sbjct: 180 VAQD-ESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKDRQ 231
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N ++ NLD + + L + F G +++ V +D + +GYGFV + ++E A
Sbjct: 145 KNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-SGASKGYGFVHYETDEAAA 203
Query: 81 YAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFS 133
AIK +N + L K + V K + K ++ AN +++ N+ + E+ + F
Sbjct: 204 QAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATEEEFRELFE 263
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG VT+ + RD ++G SRGFGF+++ + E + A++ +NG+ + + V A KK
Sbjct: 264 KFG-DVTSASLARDTESGKSRGFGFVNFINHEHAATAVDELNGKDFKGQDLYVGRAQKKH 322
Query: 194 TKGE--RHGTPAERILAAN 210
+ E R A R+ A+
Sbjct: 323 EREEELRRSYEAARMEKAS 341
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 57/224 (25%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ + TEE ELF + G V + + +D + +G+GFV F + E A A+ LN
Sbjct: 245 YVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAATAVDELN 304
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K S G NL++ NLD ++D++ L +
Sbjct: 305 GKDFKGQDLYVGRAQKKHEREEELRRSYEAARMEKASKYQGVNLYVKNLDDEIDDEKLRE 364
Query: 131 TFSAFGVIVTNPKIMRDP--DT-------------------------------------G 151
F+ FG I T+ K+MRD +T G
Sbjct: 365 LFAPFGAI-TSAKVMRDTPAETADAEDKKEKDEEKNKENKKEGEAETEEASAPKAKRPLG 423
Query: 152 NSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
S+GFGF+ +++ + + A+ MN + + N+ + V+ A +KD +
Sbjct: 424 KSKGFGFVCFNNPDEATKAVSDMNQRMVSNKPLYVALAQRKDVR 467
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 106/165 (64%), Gaps = 8/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDTIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
KI D + S+G+GF+ +++ EA+ AIE +NG L +++ V
Sbjct: 128 CKIASDEN--GSKGYGFVHFETEEAARQAIEKVNGMLLNGKKVYV 170
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 13/186 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ + D N +GYGFV F +EE A AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKIASDE--NGSKGYGFVHFETEEAARQAIEKVN 159
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGA-------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L GK + V K K+ + + N++I N ++D+ + + F FG I++
Sbjct: 160 GMLLNGKKVYVGKFIPRKERIALLGDKMKRFNNVYIKNFGDELDDDKIRELFDPFGKIIS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+M D + G SRGFGF+SY+ EA++ A++ +NG L ++ YA + K ER
Sbjct: 220 -AKVMTD-EIGKSRGFGFVSYEEPEAAEKAVDNLNGMELGGGKVL--YAGRAQKKAERQA 275
Query: 201 TPAERI 206
++
Sbjct: 276 ELKDKF 281
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
LLG N Y+ N ++ ++ + ELF G +++ V D + +G+GFV
Sbjct: 182 LLGDKMKRFN---NVYIKNFGDELDDDKIRELFDPFGKIISAKVMTDEIGK-SRGFGFVS 237
Query: 73 FRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLD--------------VGANL 114
+ E A+ A+ LN ++L G + R K ++ + L G NL
Sbjct: 238 YEEPEAAEKAVDNLNGMELGGGKVLYAGRAQKKAERQAELKDKFEKIKMERINRYQGVNL 297
Query: 115 FIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAM 174
++ NLD VD++ L FS FG I T+ ++M + G S+GFGF+ + S E + A+ M
Sbjct: 298 YVKNLDDVVDDERLRKEFSQFGTI-TSARVM--SEGGRSKGFGFVCFSSPEEATKAVTEM 354
Query: 175 NGQYLCNRQITVSYAYKKDTK 195
NG+ + ++ + V+ A +K+ +
Sbjct: 355 NGRIIVSKPLYVALAQRKEDR 375
>gi|148298695|ref|NP_001091823.1| poly A binding protein [Bombyx mori]
gi|111608107|gb|ABH10797.1| poly A binding protein [Bombyx mori]
Length = 603
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K L+DTFSAFG I++
Sbjct: 62 TMNFDIIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALFDTFSAFGNILS- 118
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D +TG S+G+GF+ +++ EA++ +IE +NG L + + V
Sbjct: 119 CKVAQD-ETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKMVYV 162
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 162/373 (43%), Gaps = 54/373 (14%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N ++E+L ++F + G + + V N +G+GFV F + A+ A L
Sbjct: 185 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 243
Query: 87 NMIKLY-GKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLL 128
N +L GKP+ R K ++ +K L G NL++ NLD +D++ L
Sbjct: 244 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 303
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+
Sbjct: 304 RKEFAPFGTI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVAL 360
Query: 189 AYKK-DTKGERHGTPAERILAAN-NPSSQKSRPHTLFASGPPSLQNAPQANG----TVGG 242
A +K D K +R+ + Q +P PSL AP+ G T
Sbjct: 361 AQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPSGASGFFVPSLPPAPRYYGPAQMTQIR 420
Query: 243 PVPPRPYA------NGAASGPISAVRPP-PPPPQAAAFPPMQVAGQAAWQGQPQHIGQGV 295
P PR A + A+ + ++P P P+A P Q + + +P QGV
Sbjct: 421 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRA----PAQSTIRTSLGARPITGQQGV 476
Query: 296 ---PQPVMPP-------PMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPP 345
+ PP P ++ PNM PP PQ A +Q P M A P+ Q
Sbjct: 477 AAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQEQ-- 534
Query: 346 PPPQQLLGRPPMP 358
+Q+LG P
Sbjct: 535 ---KQMLGERLFP 544
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE L+E F G V ++ V +D VT GYG+V F S+ + A++
Sbjct: 52 ASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALE 111
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN ++ G R+ + +D G+ N+FI NLDP ++ K L+DTFS+FG +++ K
Sbjct: 112 ELNYAEIKGVRCRLMWSQRDPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLS-CK 170
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKD 193
+ D + GNS+GFGF+ Y+S EA+ AAIE +NG L R+I V + KKD
Sbjct: 171 VATD-ENGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKKD 220
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+V N D + TE+ L ELF GP+ ++++ D + ++G+GFV F +DA A++
Sbjct: 233 TNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGH-NKGFGFVNFAEHDDAVKAVE 291
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKL 127
LN + GKP+ V +A + + + NLFI NLD +D+
Sbjct: 292 ALNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQSVNLFIKNLDESIDDAR 351
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F FG I T+ K+M D + G SRGFGF+ + E + AI MN + + N+ + V+
Sbjct: 352 LEEEFKPFGTI-TSAKVMLD-ENGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPLYVA 409
Query: 188 YAYKKDTKGERHGTPAERILAANNPSSQK 216
A K R A++I A N Q+
Sbjct: 410 LA---QPKAIRRSQLAQQIQARNQMRMQQ 435
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E+F GPV ++ V +D VT GY +V F + DA+ A+
Sbjct: 34 ASLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALD 93
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GK R+ + +D G AN+F+ NLD +D K LYDTFS FG I++ K
Sbjct: 94 TLNYSPIRGKQCRIMWSHRDPTLRKAGNANVFVKNLDKTIDNKALYDTFSLFGNILS-CK 152
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
+ D D G SRG+GF+ +++ E++ AI +NG + + + V K + E+HG
Sbjct: 153 VATDDD-GKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGPFQKHAERAEQHG 208
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+A +V NLD + + L++ F G +++ V D +GYGFV F ++E A AI
Sbjct: 121 NANVFVKNLDKTIDNKALYDTFSLFGNILSCKVATDD-DGKSRGYGFVHFENDESAHKAI 179
Query: 84 KVLNMIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNL-DPDVDEKLLYDTFSAF 135
LN + + K + V +A Q N++I +L + E+ + F F
Sbjct: 180 TKLNGMMIGEKAVYVGPFQKHAERAEQHGDEPRKFTNVYIKHLPESWTTEEDVQKAFEEF 239
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
G I T+ I D R F F++Y+ F+++ A+EAMNG+
Sbjct: 240 GKI-TSVAIQTDR---KGRRFAFVNYEDFDSAAKAVEAMNGK 277
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 143/379 (37%), Gaps = 74/379 (19%)
Query: 16 QHSAERNQDATAYVGNL-DPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
QH E + Y+ +L + TEE + + F + G + +V + DR + + FV +
Sbjct: 206 QHGDEPRKFTNVYIKHLPESWTTEEDVQKAFEEFGKITSVAIQTDRKG---RRFAFVNYE 262
Query: 75 SEEDADYAIKVLN----------------------------MIKLY--------GKPIRV 98
+ A A++ +N KLY + +
Sbjct: 263 DFDSAAKAVEAMNGKDMRTQEEIDAGKGEEESTEEGSDEMPEYKLYVTRAQTKTERSAEL 322
Query: 99 NKASQDKKSLDVG---ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG 155
Q K + VG NL++ NL DVD++ L F FG I T+PK+M D +TG SRG
Sbjct: 323 RNKFQAKNTEKVGNQSCNLYVKNLPEDVDDEKLRQMFEQFGEI-TSPKVMVDENTGVSRG 381
Query: 156 FGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER----------------- 198
FGF+ + + + AI+AM+ + + + V+ A K+D + ER
Sbjct: 382 FGFVCFANQADGEKAIQAMHLKLYGGKPLFVAVAEKRDARIERLQQRYRAGIPMGGFQQN 441
Query: 199 -HGTPAERILAANNPS------SQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYAN 251
G R A NPS Q + + + G GP+ Y
Sbjct: 442 YQGYRGPRNFNAPNPSPMYYSGGQNRQGGMMQGPPGGFVGGPRGPMGAQRGPMMSGGYPV 501
Query: 252 GAASGPISAVRPPPPPPQAAAFPPMQVA-GQAAWQGQPQHIGQGVPQPVMPPPMQFRPPP 310
P P P FPP Q GQ QG P QG P M P P P
Sbjct: 502 NRGPRPTGPNMMPMNQPPRGNFPPQQRFPGQ---QGGPFMGQQGGMPPRMMPEQHNMPMP 558
Query: 311 NMPPPPPPQLASAMQRPPP 329
+ PPP A+A+ PP
Sbjct: 559 HQ--NPPPMTAAALASAPP 575
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 113/178 (63%), Gaps = 9/178 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADY 81
A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+ A+
Sbjct: 16 AHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAET 73
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVI 138
A++ LN K++ IRVN A Q +++ + +N +F+G+L P+V++++L FSAFG +
Sbjct: 74 ALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTL 133
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K G
Sbjct: 134 -SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGG 190
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + + +VG+L P+V +E+L + F G + + V D + +GYGF+ FR
Sbjct: 98 QNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRD 157
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQD------------------------------- 104
+ DA+ AI +N L + IRVN A+Q
Sbjct: 158 KTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLS 217
Query: 105 -----KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFI 159
+++ +++GNL P + L F + G + +I D RGF F+
Sbjct: 218 YESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD----RGFAFV 270
Query: 160 SYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
D+ E + AI + GQ + R I S+
Sbjct: 271 KLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 300
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 229 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADR------GFAFVKLDTHEHAAMAI 282
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDP 121
L ++G+PI K S K D A L G++ P
Sbjct: 283 VQLQGQMVHGRPI---KCSWGKDRADGTAPLSTGSMSP 317
>gi|221121498|ref|XP_002156904.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Hydra
magnipapillata]
Length = 635
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L+P VTE +L+E F Q GPV+++ V +D VT GY +V F+ DA+ AI
Sbjct: 11 ASLYVGDLNPDVTEAMLFEKFSQTGPVLSIRVCRDLVTRRSLGYAYVNFQQPADAERAID 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+P R+ + +D G N+FI NLD ++D K LYD FSAFG I++ K
Sbjct: 71 TMNYDPIKGRPCRIMWSQRDPTLRRSGVGNIFIKNLDKNIDNKGLYDAFSAFGNILS-CK 129
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
I D SRG+GF+ Y++ EA+ AI +NG L ++++ V K + E+ G A
Sbjct: 130 IAVDSKNV-SRGYGFVHYETKEAAHEAIAKVNGMMLNDKKVFVGEFMSKRERLEKLGDQA 188
Query: 204 ERI 206
++
Sbjct: 189 KKF 191
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 24/203 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V N + EE L E+F + G + + V + + +G+GFV F + E A+ A+ L
Sbjct: 194 VFVKNFGDSLDEEKLKEMFGKHGEITSCVVMAE--SGKSKGFGFVAFEAPEAAEAAVNEL 251
Query: 87 NMIKLYGKPIRVNKASQD-KKSLDV----------------GANLFIGNLDPDVDEKLLY 129
N +++ G+ + V +A + ++++++ G NL+I NL+ +D++ L
Sbjct: 252 NGLEIEGRKLVVCRAQKKAERTMELKSRFEAQKMERINRYQGVNLYIKNLEDGLDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M+D + G S+GFGF+ + S + + A+ MNG+ L + + V+ A
Sbjct: 312 SEFSTYGTI-TSAKVMKD-EKGISKGFGFVCFSSPDEATKAVTEMNGRILVTKPLYVALA 369
Query: 190 YKKDTKGERHGTPAERILAANNP 212
+K+ ER + + L NP
Sbjct: 370 QRKE---ERRAQLSTQFLQRVNP 389
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 16/191 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ + D N+ +GYGFV + ++E A AI +N
Sbjct: 102 FIKNLDKNIDNKGLYDAFSAFGNILSCKIAVDS-KNVSRGYGFVHYETKEAAHEAIAKVN 160
Query: 88 MIKLYGKPIRVNKASQDKKSLD-VG------ANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + ++ L+ +G N+F+ N +DE+ L + F G I T
Sbjct: 161 GMMLNDKKVFVGEFMSKRERLEKLGDQAKKFKNVFVKNFGDSLDEEKLKEMFGKHGEI-T 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-----DTK 195
+ +M ++G S+GFGF+++++ EA++AA+ +NG + R++ V A KK + K
Sbjct: 220 SCVVM--AESGKSKGFGFVAFEAPEAAEAAVNELNGLEIEGRKLVVCRAQKKAERTMELK 277
Query: 196 GERHGTPAERI 206
ERI
Sbjct: 278 SRFEAQKMERI 288
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q Y+ NL+ + +E L F G + + V KD + +G+GFV F S ++A
Sbjct: 290 RYQGVNLYIKNLEDGLDDERLRSEFSTYGTITSAKVMKDE-KGISKGFGFVCFSSPDEAT 348
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDP 121
A+ +N L KP+ V A + ++ + F+ ++P
Sbjct: 349 KAVTEMNGRILVTKPLYVALAQRKEERRAQLSTQFLQRVNP 389
>gi|50305767|ref|XP_452844.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641977|emb|CAH01695.1| KLLA0C14388p [Kluyveromyces lactis]
Length = 203
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 111/191 (58%), Gaps = 10/191 (5%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPK---DRVTNLHQGYGFVEFRSEEDADYA 82
T YVGNLD +V + LL+ELFVQAGP+ + PK D + H Y F++F + +D DY
Sbjct: 4 TVYVGNLDSRVNKSLLYELFVQAGPISYIKFPKEKQDEDDSQHSKYAFIKFVN-DDVDYV 62
Query: 83 IKVL-NMIKLYGKPIRVNKASQ--DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
K+ N + LYGKP++V ++++ + DVGA LF+ NLD +D L + F FG ++
Sbjct: 63 CKLFDNRVSLYGKPLKVRRSNKQPETTDFDVGAKLFVKNLDESIDVPQLSNIFKIFGKLL 122
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDT-KGER 198
P++ G R ++ + +F+ SD A++ +N L N+ I + YAYK D K +
Sbjct: 123 RKPEVFY-LQNGTLRC-AYVWFTTFKHSDEALQQLNETNLANKLIYIDYAYKDDMQKTAK 180
Query: 199 HGTPAERILAA 209
HG ER+L A
Sbjct: 181 HGDEIERLLDA 191
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY V F DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NL+ +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAE 182
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 44/250 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N ++ ++ L LF + G V++V V D
Sbjct: 169 FVGQFKSRKEREAELGTRTKEFTNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDE-G 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRV-----------------NKASQDK 105
+G+GFV F EDA A+ +N +L GK I V + +QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGPAQKKVDRHIELKRKFEQVTQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
G NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 GIRYQGINLYVKNLDDGIDDERLQKEFSPFGTI-TSTKVM--TEGGRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFAS 225
+ A+ MNG+ + + + V+ A +K+ ER N Q+ S
Sbjct: 345 EATKAVSEMNGRIVATKPLYVALAQRKE----------ERQAHLTNQYIQRMAS---VRS 391
Query: 226 GPPSLQNAPQ 235
GP SL NA Q
Sbjct: 392 GPNSLINAYQ 401
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 99/182 (54%), Gaps = 11/182 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NL+ + + L++ F G +++ V D N +G+GFV F +EE
Sbjct: 92 SLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVCDE--NGSKGHGFVHFETEE 149
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYD 130
A+ AI+ +N + L + + V + S+ ++ ++G N++I N +D+K L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGTRTKEFTNVYIKNFGDRMDDKTLNG 209
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG +++ K+M D + G S+GFGF+S++ E + A++ MNG+ L + I V A
Sbjct: 210 LFGRFGQVLS-VKVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGPAQ 267
Query: 191 KK 192
KK
Sbjct: 268 KK 269
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LDP VT+ L++LF Q G VV+V V +D + GYG+V F + +DA A+
Sbjct: 31 TSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALD 90
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN L +PIR+ + +D G N+FI NLD +D K L+DTFS FG I++ K
Sbjct: 91 VLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILS-CK 149
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D +G S+G+GF+ +D+ E++ AIE +NG L ++Q+ V
Sbjct: 150 VATDS-SGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 191
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ + +V NL T++ L F + G + + V +D + +GFV F +
Sbjct: 201 ESAADKAKFNNVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDG-DGKSKCFGFVNFEN 259
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGN 118
+DA A++ LN K V KA + K++ D GANL++ N
Sbjct: 260 ADDAARAVEALNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKN 319
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD + ++ L + FS FG I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+
Sbjct: 320 LDDSIGDEKLKELFSPFGTI-TSCKVMRDPN-GLSRGSGFVAFSTPEEASRALLEMNGKM 377
Query: 179 LCNRQITVSYAYKKDTKGER 198
+ ++ + V+ A +K+ + R
Sbjct: 378 VVSKPLYVTLAQRKEDRRAR 397
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 128 CKVA--CDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 7 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 66
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 67 QLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS-CK 125
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S+G+GF+ Y++ EA++ AI+A+NG L ++++ V + + +
Sbjct: 126 VATD-EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKER 176
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D +GYGFV + + E A+ AIK +N
Sbjct: 98 FIKNLDEQIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAAETAIKAVN 156
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + R + S+ ++ + N+++ N+DP+V ++ F FG I +
Sbjct: 157 GMLLNDKKVYVGHHISRKERQSKIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRITS 216
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+++ D G SRGFGF+++D+ E + AA+EA++ + R++ V+ A KK + E
Sbjct: 217 --AVLQVDDEGKSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQKKAEREE 271
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+NQ YV N+DP+VT+E +LF G + + + D +G+GFV F + E+A
Sbjct: 184 KNQFTNIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDD-EGKSRGFGFVNFDTHEEAH 242
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A++ L+ + G+ + V +A + +K S G NL+I NL+ D+
Sbjct: 243 AAVEALHDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDI 302
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L F FG I T+ K+MRD + G S+GFGF+ + S + + A+ MN + + +
Sbjct: 303 DDERLRGEFEPFGNI-TSAKVMRD-EKGISKGFGFVCFSSPDEATKAVAEMNNKMIGTKP 360
Query: 184 ITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 361 LYVSLAQRREVR 372
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 116/181 (64%), Gaps = 9/181 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFR 74
+AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 7 AAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYM 64
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDT 131
A+ A++ LN K++ IRVN A Q +++ + +N +F+G+L P+V++++L
Sbjct: 65 DMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKA 124
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FSAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +
Sbjct: 125 FSAFGTL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 183
Query: 192 K 192
K
Sbjct: 184 K 184
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 48/222 (21%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + + +VG+L P+V +E+L + F G + + V D + +GYGF+ FR
Sbjct: 96 QNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRD 155
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL--------------------------- 108
+ DA+ AI +N L + IRVN A+Q +
Sbjct: 156 KTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPVGVRSGSMSAGSGGGGGAPAPMNFS 215
Query: 109 --------------DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSR 154
+++GNL P + L F + G + +I D R
Sbjct: 216 GGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD----R 268
Query: 155 GFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
GF F+ D+ E + AI + GQ + R I S+ + G
Sbjct: 269 GFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGG 310
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 232 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADR------GFAFVKLDTHEHAAMAI 285
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDP 121
L ++G+PI K S K D G L G+L P
Sbjct: 286 VQLQGQMVHGRPI---KCSWGKDRADGGVALPAGSLSP 320
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LDP VT+ L++LF Q G VV+V V +D + GYG+V F + +DA A+
Sbjct: 28 TSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALD 87
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN L +PIR+ + +D G N+FI NLD +D K L+DTFS FG I++ K
Sbjct: 88 VLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILS-CK 146
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D +G S+G+GF+ +D+ E++ AIE +NG L ++Q+ V
Sbjct: 147 VATDS-SGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 188
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 17/215 (7%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + + L + F G +++ V D + +GYGFV+F +EE
Sbjct: 109 SIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDS-SGQSKGYGFVQFDNEE 167
Query: 78 DADYAIKVLNMIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLY 129
A AI+ LN + L K + V +++ DK + N+F+ NL + L
Sbjct: 168 SAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTADKAKFN---NVFVKNLSESTTDDELK 224
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F FG I T+ +MRD D G S+ FGF+++++ + + A+EA+NG+ +++ V A
Sbjct: 225 NVFGEFGTI-TSAVVMRDGD-GKSKCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKA 282
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRPHTLFA 224
K K ER +R + ++ K + L+
Sbjct: 283 QK---KSERENELKQRFEQSMKEAADKYQGANLYV 314
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 20/200 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ + +V NL T++ L +F + G + + V +D + +GFV F +
Sbjct: 198 ESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDG-DGKSKCFGFVNFEN 256
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGN 118
+DA A++ LN K K V KA + K++ D GANL++ N
Sbjct: 257 ADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKN 316
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD + + L + FS FG I T+ K+MRDP+ G SRG GF+++ + + + A+ MNG+
Sbjct: 317 LDDSLGDDKLKELFSPFGTI-TSCKVMRDPN-GISRGSGFVAFSTPDEASRALLEMNGKM 374
Query: 179 LCNRQITVSYAYKKDTKGER 198
+ ++ + V+ A +K+ + R
Sbjct: 375 VVSKPLYVTLAQRKEDRRAR 394
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D + GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFEVIKGRPVRIMWSQRDPGLRKS-GVG-NVFIKNLDDSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRG GF+ +++ EA+ AI+ MNG L +R++ V + + + G
Sbjct: 129 KVVC---DENGSRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFVGHFKSRKEREAEFGA 185
Query: 202 PA 203
A
Sbjct: 186 RA 187
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +G+GFV F ++E A AI+ +
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIQTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V S+ ++ + GA N++I N D+D+ L + FS FG +
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTL 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D TG S+GFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 219 S-VKVMMD-HTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKR 269
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + + L E+F + G ++V V D T +G+GFV F E+A A+ +
Sbjct: 193 VYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDH-TGRSKGFGFVNFEKHEEAQKAVADM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ G+ + V +A Q++ S G NL++ NLD +D++ L
Sbjct: 252 NGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPYGTI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYV 171
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 24/187 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV-PKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N +T++ L E+F + G + + V KD +G+GFV F + A+ A+ L
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKD--DGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 87 NMIKLY-GKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLL 128
N + GK + V +A + K+ + G NL++ NLD +D++ L
Sbjct: 253 NGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F+ FG I T+ K+M + G S+GFGF+ + E + A+ MNG+ + ++ + V+
Sbjct: 313 RKEFTPFGTI-TSAKVMMEE--GRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVAL 369
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 370 AQRKEDR 376
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIRGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DNHGSRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R + N
Sbjct: 183 LGARAMEFTN 192
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--NHGSRGFGFVHFETHEAAQQAIVTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD D+G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRD-DSGHSRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQKR 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 142/320 (44%), Gaps = 66/320 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVTDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLRR 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
+K+ ER N Q R T+ A G P L
Sbjct: 370 RKE----------ERKAILTNQYMQ--RLSTVRALGGPLL-------------------- 397
Query: 251 NGAASGPISAVRP--PPPPPQAAAF---PPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQ 305
G+ P S P P PP Q A + PMQ A + W QP P PP
Sbjct: 398 -GSFQQPASYFLPAVPQPPAQTAYYASSSPMQPAPR--WTAQPPR-----PSSTYPPAAS 449
Query: 306 FRPPPNMPPPPPPQLASAMQ 325
PP M PP Q++ Q
Sbjct: 450 MIRPPAMLRRPPAQVSGVRQ 469
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYV 171
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L E+F + G + + V + D +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + ++ S G NL++ NLD ++++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I + +M D G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRREFAPFGTITSAKVMMED---GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + + D + A++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALE 118
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 119 ELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D +TG S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 178 VAQD-ETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD 227
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 12/192 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D T +GYGFV + ++E A AIK +N
Sbjct: 150 FIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-TGASKGYGFVHYETDEAASQAIKHVN 208
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+ DV E F +G VT
Sbjct: 209 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNIAADVTEDDFRQLFEKYG-DVT 267
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD + G SRGFGF+++ + E++ A++ +N + + + V A KK + E R
Sbjct: 268 SSSLARDQE-GKSRGFGFVNFTTHESAFKAVDELNNKDFHGQDLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A R+ AN
Sbjct: 327 KSYEAARLEKAN 338
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 72/238 (30%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ VTE+ +LF + G V + + +D+ +G+GFV F + E A A+ LN
Sbjct: 243 YVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQ-EGKSRGFGFVNFTTHESAFKAVDELN 301
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+G+ + V +A + +KS + G NL+I NLD DVD+ L +
Sbjct: 302 NKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDDKLRE 361
Query: 131 TFSAFGVIVTNPKIMR------DPDT---------------------------------- 150
F FG I T+ K+MR D D
Sbjct: 362 MFKDFGSI-TSAKVMRETPTEGDEDKKEKDESDKENQEEVKEEVKEESKEESKDETKEGE 420
Query: 151 -------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ MN + + + V+ A +KD +
Sbjct: 421 EDKKAEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVR 478
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R A+ YVG+LD VT+ L +LF Q VV++ V +D T+ GYG+V + EDA
Sbjct: 165 RFASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAA 224
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
A+ VLN L GKPIR+ + +D G N+FI NLD +D K L+DTFSAFG I+
Sbjct: 225 RALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNIL 284
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ K+ D +G S+G GF+ +DS EA+ AI+ +NG L ++Q+ V
Sbjct: 285 S-CKVATDA-SGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFV 329
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V N+ +TEE L +F + GP+ +V V +D + +GFV F + +DA +++ L
Sbjct: 350 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDG-DGKSKCFGFVNFENVDDAAMSVEAL 408
Query: 87 NMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLDPDVDEKLLY 129
N K K V KA + K+++D GANL+I NLD + + L
Sbjct: 409 NGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDDKLK 468
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ FG I T+ K+MRDP+ G SRG GF+++ S E + A+ MN + + ++ + V+ A
Sbjct: 469 ELFAQFGTI-TSCKVMRDPN-GLSRGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVALA 526
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 527 QRKEDRRAR 535
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + + L + F G +++ V D + + +G+GFV+F SEE
Sbjct: 250 SIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATD-ASGMSKGHGFVQFDSEE 308
Query: 78 DADYAIKVLNMIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLY 129
A AI LN + L K + V +++ +K+ + N+F+ N+ + E+ L
Sbjct: 309 AAQKAIDKLNGMLLNDKQVFVGPFVRKQERESTINKEKFN---NVFVKNISEGMTEEDLT 365
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG I T+ +MRD D G S+ FGF+++++ + + ++EA+NGQ +++ V A
Sbjct: 366 RIFGEFGPI-TSVVVMRDGD-GKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKA 423
Query: 190 YKKDTK 195
KK +
Sbjct: 424 QKKSER 429
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 63/275 (22%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED------ 78
+ YVG+L+ V + L++LF Q G VV+V V +D T GYG+V + + +D
Sbjct: 30 TSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDEKEKET 89
Query: 79 ------------ADYAI------------------------KVLNMIKLYGKPIRVNKAS 102
++YAI + LN +++ G+ V
Sbjct: 90 IYEGFCVFCLIPSNYAIFFVLGFSYIHKKRRGKERGGELQKRELNFLRVGGEMAEV---- 145
Query: 103 QDKKSLDVGAN--------------LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDP 148
QD + L G N L++G+LD +V + L+D FS +V+ ++ RD
Sbjct: 146 QDHEGLLSGTNDEPNIGPSRFASASLYVGDLDLNVTDSQLHDLFSQLAQVVS-IRVCRDS 204
Query: 149 DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILA 208
T S G+G+++Y E + A++ +N L + I + Y++ +D + GT I
Sbjct: 205 TTHRSLGYGYVNYTDLEDAARALDVLNFTPLNGKPIRIMYSH-RDPSIRKSGTGNIFIKN 263
Query: 209 ANNPSSQKSRPHTLFASGPP-SLQNAPQANGTVGG 242
+ K+ T A G S + A A+G G
Sbjct: 264 LDKGIDHKALHDTFSAFGNILSCKVATDASGMSKG 298
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ Q A Y+ NLD + ++ L ELF Q G + + V +D L +G GFV F S
Sbjct: 442 KEAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDP-NGLSRGSGFVAFSS 500
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ V A +D+++
Sbjct: 501 PEEASRALAEMNSKMVVSKPLYVALAQRKEDRRA 534
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISY-------- 161
V +L++G+L+ +V++ LYD FS G +V+ ++ RD T S G+G+++Y
Sbjct: 28 VTTSLYVGDLELNVNDSQLYDLFSQMGAVVS-VRVCRDLSTRRSLGYGYVNYSNPQDEKE 86
Query: 162 -DSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERIL 207
++ + Y + SY +KK ER G +R L
Sbjct: 87 KETIYEGFCVFCLIPSNYAIFFVLGFSYIHKKRRGKERGGELQKREL 133
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E
Sbjct: 129 NVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AIK +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 38/251 (15%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA----ERILAANNPSSQKSRPHT 221
+ A+ MNG+ + + + V+ A +K+ ER +R+ + +Q++ P
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSG 401
Query: 222 LFASGPPSLQN 232
F + P QN
Sbjct: 402 YFMTAVPQTQN 412
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 109/178 (61%), Gaps = 3/178 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L+++F Q G VV+V V +D T + GY +V F S DA A+++
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ +++D S G AN+FI NLD +D K LYDTFSAFG I++ K+
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILS-CKV 161
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
+ +G S+G+GF+ Y+ E++ AI +NG L ++++ V +K + G+P
Sbjct: 162 ATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP 218
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 21/191 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TE+ L ELF GP+ +V V + + +GFV F + +DA +A++
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 280
Query: 86 LNMIKLYGKPIRVNKAS-------QDKKSLDV----------GANLFIGNLDPDVDE-KL 127
LN K K + V +A Q K+S + G NL++ NLD VD+ +
Sbjct: 281 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 340
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ FG I T+ K+MRD + G ++G GF+++ S E + A+ AMNG+ + ++ + V+
Sbjct: 341 LKELFAEFGTI-TSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVA 398
Query: 188 YAYKKDTKGER 198
A +K+ + R
Sbjct: 399 LAQRKEERRAR 409
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 162/385 (42%), Gaps = 42/385 (10%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ A ++ NLD + + L++ F G +++ V + ++ +GYGFV++ +E
Sbjct: 123 SSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDE 181
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTF 132
A AI LN + L K + V + ++ +V N+++ NL E L + F
Sbjct: 182 SAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELF 241
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I + I+ D G SR FGF+++++ + + A+E +NG+ ++++ V A KK
Sbjct: 242 GNFGPITS--VIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 299
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF-------ASGPPSLQNAPQANGTVGGPVP 245
ER E +N ++ +++ L+ L+ GT+
Sbjct: 300 S---EREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKV 356
Query: 246 PRPYANGAASGP-ISAVRPPPPPPQA--------AAFPPMQVA-------GQAAWQGQPQ 289
R +NG G A + +A P+ VA +A Q Q
Sbjct: 357 MRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFS 415
Query: 290 HIGQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPPQ 349
+ +PVMPPP+ R P M PP P + + P P + QP Q P
Sbjct: 416 QM-----RPVMPPPVAPRMP--MYPPGVPGMGQQLFYGQPPPAFVNPQPGYGFQQHMIPG 468
Query: 350 QLLGRPPMPHMSMPPPPPPQAPPPP 374
G PMP+ MP Q P P
Sbjct: 469 MRPGVAPMPNFVMPMVQQGQQPQRP 493
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 16 QHSAERNQDATAYVGNLDPQV-TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+ +A+RNQ Y+ NLD V +E L ELF + G + + V +D +++G GFV F+
Sbjct: 315 KETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFK 373
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
S EDA A+ +N + KP+ V A + ++
Sbjct: 374 SSEDATRALVAMNGKMVGSKPLYVALAQRKEE 405
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E
Sbjct: 129 NVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AIK +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VELMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 38/251 (15%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V + D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVELMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA----ERILAANNPSSQKSRPHT 221
+ A+ MNG+ + + + V+ A +K+ ER +R+ + +Q++ P
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSG 401
Query: 222 LFASGPPSLQN 232
F + P QN
Sbjct: 402 YFMTAVPQTQN 412
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 3/191 (1%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G +A +A+ YVG+LD + E L++LF Q PV+++ V +D+ GY +V
Sbjct: 27 MTGHTAAAGFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVN 86
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDT 131
F S +DA A++ LN L GKPIR+ + +D G AN+FI NLDP +D K L DT
Sbjct: 87 FASPQDATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDT 146
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
F+AFG +++ KI D + G S+G+GF+ ++ EA+ AI+ +NG + ++Q+ V +
Sbjct: 147 FAAFGTVLS-CKIALD-NNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVR 204
Query: 192 KDTKGERHGTP 202
+ +G+P
Sbjct: 205 HQERNXGNGSP 215
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 21/189 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL T++ L +F + G + + V +D + + + +GFV F+S + A A++ LN
Sbjct: 221 YVKNLSETTTDDDLKNIFGKYGSITSAVVMRD-ASGMSKCFGFVNFQSSDSAAAAVEHLN 279
Query: 88 -------MIKLYGKPIRVN--------KASQDKKSLD---VGANLFIGNLDPDVDEKLLY 129
+ GK R + K Q++K+ G NL++ NLD V+++ L
Sbjct: 280 GATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGXNLYLKNLDDSVNDEKLX 339
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS FG I T+ K+M DP G S+G GF+++ + E + A+ MNG+ + + + V+ A
Sbjct: 340 ELFSEFGTI-TSCKVMLDPQ-GLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVA 397
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 398 QRKEERKAR 406
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ + Y+ NLD V +E L ELF + G + + V D L +G GFV F + E+A
Sbjct: 317 EKFKGXNLYLKNLDDSVNDEKLXELFSEFGTITSCKVMLDP-QGLSKGSGFVAFLTPEEA 375
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+ V+N + KP+ V A + ++
Sbjct: 376 TRALNVMNGKMIGRKPLYVAVAQRKEE 402
>gi|389608229|dbj|BAM17726.1| polyA-binding protein [Papilio xuthus]
Length = 619
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A++
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALE 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTF+AFG I++
Sbjct: 71 GMNFDIIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKTIDNKAMYDTFTAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D +TG S+G+GF+ +++ EA++ +IE +NG L +++ V
Sbjct: 128 CKVAQD-ETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 171
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N ++E+L E+F + G + + V +D + +G+GFV F + A+ A
Sbjct: 195 YVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSS---RGFGFVAFEDPDAAERACME 251
Query: 86 LNMIKLY-GKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKL 127
LN +L GKP+ R K ++ +K L G NL++ NLD +D++
Sbjct: 252 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + KPIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 71 TMNFDAIKNKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKTIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
++ D + S+G+GF+ +++ EA++ AI +NG L N+++ V
Sbjct: 128 CRVATDEEAA-SKGYGFVHFETEEAANKAISKVNGMLLNNKKVYV 171
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + +++ F G +++ V D +GYGFV F +EE A+ AI +N
Sbjct: 102 FIKNLDKTIDNKAMYDTFSAFGNILSCRVATDEEA-ASKGYGFVHFETEEAANKAISKVN 160
Query: 88 MIKLYGKPIRVNK---ASQDKKSLDVGA----NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + +K L A N++I N ++D+ L F +G I T
Sbjct: 161 GMLLNNKKVYVGKFIPRKEREKMLGDKARCFTNVYIKNFGDELDDDKLLVIFEKYGKI-T 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D D+G +RGFGF+S++ ++++ A+E +NG+ + R + V A KK
Sbjct: 220 SAKVMTD-DSGKNRGFGFVSFEEPDSAERAVEELNGKDMGGRPLYVGRAQKK 270
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N ++ ++ L +F + G + + V D + ++G+GFV F + A+ A++ LN
Sbjct: 195 YIKNFGDELDDDKLLVIFEKYGKITSAKVMTDD-SGKNRGFGFVSFEEPDSAERAVEELN 253
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ G+P+ V +A Q++ + G NL++ NLD +D++ L
Sbjct: 254 GKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLYVKNLDDALDDERLRK 313
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ K+M D + G S+GFGF+ + S E + A+ MNG+ + ++ + V+ A
Sbjct: 314 EFGPFGNI-TSAKVMTDAN-GRSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQ 371
Query: 191 KKDTK 195
+K+ +
Sbjct: 372 RKEDR 376
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E
Sbjct: 129 NVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AIK +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 38/251 (15%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA----ERILAANNPSSQKSRPHT 221
+ A+ MNG+ + + + V+ A +K+ ER +R+ + +Q++ P
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSG 401
Query: 222 LFASGPPSLQN 232
F + P QN
Sbjct: 402 YFMTAVPQTQN 412
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 7/194 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L++ F +GPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKPIR+ + +D G N+FI NLD +D K LYDTFS+FG I++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKV 121
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
+ D S+GFGF+ Y+S E++ AIE +NG + ++++ V+ ++ + G A
Sbjct: 122 VC---DINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAA 178
Query: 204 ER---ILAANNPSS 214
+ + N P S
Sbjct: 179 KHFTNLFVKNLPDS 192
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NL + L E F Q G VV+ V D T L + +GF+ F+ + A+ A+++++
Sbjct: 185 FVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIMH 244
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ GK + + K Q++ G NL++ NLD +D++ L +
Sbjct: 245 EKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGLRE 304
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ K++ D + G S+GFGF+ + S E + A+ MNG+ + + V A
Sbjct: 305 AFKQFGNI-TSAKVITDLN-GRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ 362
Query: 191 KKDTK 195
+K+ +
Sbjct: 363 RKEDR 367
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + L++ F G +++ V D N +G+GFV + S+E
Sbjct: 83 SLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDE 140
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A AI+ +N + + K + V + S++ + + G NLF+ NL D L +
Sbjct: 141 SAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLE 200
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG +V++ K++ D TG S+ GFIS+ + ++AA+E M+ + + +++ A
Sbjct: 201 NFEQFGEVVSH-KVICDETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQ 259
Query: 191 KKDTKGERHGTPAERI 206
KK + E+I
Sbjct: 260 KKAERSSELKAKYEKI 275
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L++LF Q G VV+V V +D T GYG+V + + +DA A+
Sbjct: 34 TSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 93
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN L +PIR+ + +D G N+FI NLD +D K L+DTFS+FG I++ K
Sbjct: 94 VLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILS-CK 152
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D +G S+G+GF+ +D+ EA+ AIE +NG L ++Q+ V
Sbjct: 153 VAVDG-SGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYV 194
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 107/200 (53%), Gaps = 20/200 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + +R + +V NL T++ L + F + G + + V +D + +GFV F S
Sbjct: 204 ESTGDRAKFNNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDG-DGKSKCFGFVNFES 262
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDV--------------GANLFIGN 118
+DA A++ LN K+ K V KA S+ + L + GANL++ N
Sbjct: 263 TDDAARAVEALNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKN 322
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD + ++ L + FS++G I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+
Sbjct: 323 LDDSIADEKLKELFSSYGTI-TSCKVMRDPN-GVSRGSGFVAFSTPEEASRALLEMNGKM 380
Query: 179 LCNRQITVSYAYKKDTKGER 198
+ ++ + V+ A +K+ + R
Sbjct: 381 VASKPLYVTLAQRKEDRRAR 400
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + + L + F G +++ V D + +GYGFV+F +EE
Sbjct: 115 SIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDG-SGQSKGYGFVQFDTEE 173
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTF 132
A AI+ LN + L K + V Q+++S A N+F+ NL + L TF
Sbjct: 174 AAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKKTF 233
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ +MRD D G S+ FGF++++S + + A+EA+NG+ + +++ V A KK
Sbjct: 234 GEFGTI-TSAVVMRDGD-GKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKK 291
Query: 193 DTK 195
+
Sbjct: 292 SER 294
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+LD +V + LYD F+ G +V+ ++ RD T S G+G+++Y + + +
Sbjct: 32 VTTSLYVGDLDMNVTDSQLYDLFNQLGQVVS-VRVCRDLTTRRSLGYGYVNYSNPQDAAR 90
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A++ +N L NR I + Y+++
Sbjct: 91 ALDVLNFTPLNNRPIRIMYSHR 112
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 38/251 (15%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD D+D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA----ERILAANNPSSQKSRPHT 221
+ A+ MNG+ + + + V+ A +K+ ER +R+ + +Q++ P
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSG 401
Query: 222 LFASGPPSLQN 232
F + P QN
Sbjct: 402 YFMTAVPQTQN 412
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E
Sbjct: 129 NVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AIK +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 31/210 (14%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ A+ MNG+ + + + V+ A +K+ +
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKEER 374
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L++LF Q VV+V + +D T GYG+V F + DA AI V
Sbjct: 25 SLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDV 84
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GK IR+ + +D + G AN+FI NLD +D K L+DTFSAFG I++ KI
Sbjct: 85 LNFTPLNGKTIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALFDTFSAFGNILS-CKI 143
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPA 203
D +G S+G GF+ ++S E++ AI+ +NG + ++Q+ V + K+D + GT
Sbjct: 144 ATDA-SGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGPFQRKQDRESALSGTKF 202
Query: 204 ERILAAN 210
+ N
Sbjct: 203 NNVYVKN 209
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA ++ A ++ NLD + + L++ F G +++ + D + +G+GFV+F SEE
Sbjct: 105 SARKSGAANVFIKNLDKAIDHKALFDTFSAFGNILSCKIATD-ASGQSKGHGFVQFESEE 163
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTF 132
A AI LN + + K + V + QD++S G N+++ NL E L F
Sbjct: 164 SAQNAIDKLNGMLINDKQVYVGPFQRKQDRESALSGTKFNNVYVKNLFEATTEADLKSIF 223
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +MRD D G S+GFGF+++ + E + A+EA+NG+ ++ V A K
Sbjct: 224 GEYGAI-TSAVVMRDVD-GKSKGFGFVNFANVEDAAKAVEALNGKNFDGKEWYVGKAQK- 280
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANG 252
K ER ER + + K L+ + +VG ++
Sbjct: 281 --KSERELELKERNEQSTKETVDKYHGTNLY---------IKNLDDSVGDEELRELFSEF 329
Query: 253 AASGPISAVRPPPPPPQAAAFPPMQVAGQAAW 284
+R P + + F +A A+W
Sbjct: 330 GTITSCKVMRDPSGISRGSGFVAFSIAEGASW 361
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 20/188 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL TE L +F + G + + V +D V +G+GFV F + EDA A++ LN
Sbjct: 206 YVKNLFEATTEADLKSIFGEYGAITSAVVMRD-VDGKSKGFGFVNFANVEDAAKAVEALN 264
Query: 88 MIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLDPDVDEKLLYD 130
GK V KA + K+++D G NL+I NLD V ++ L +
Sbjct: 265 GKNFDGKEWYVGKAQKKSERELELKERNEQSTKETVDKYHGTNLYIKNLDDSVGDEELRE 324
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+MRDP +G SRG GF+++ E + A+ MNG+ + + + V+ A
Sbjct: 325 LFSEFGTI-TSCKVMRDP-SGISRGSGFVAFSIAEGASWALGEMNGKMVAGKPLYVALAQ 382
Query: 191 KKDTKGER 198
+K+ + R
Sbjct: 383 RKEDRRAR 390
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ Y+ NLD V +E L ELF + G + + V +D + + +G GFV F
Sbjct: 297 KETVDKYHGTNLYIKNLDDSVGDEELRELFSEFGTITSCKVMRDP-SGISRGSGFVAFSI 355
Query: 76 EEDADYAIKVLNMIKLYGKPIRV 98
E A +A+ +N + GKP+ V
Sbjct: 356 AEGASWALGEMNGKMVAGKPLYV 378
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 38/251 (15%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD D+D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDDIDDERLQKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA----ERILAANNPSSQKSRPHT 221
+ A+ MNG+ + + + V+ A +K+ ER +R+ + +Q++ P
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSG 401
Query: 222 LFASGPPSLQN 232
F + P QN
Sbjct: 402 YFMTAVPQTQN 412
>gi|345316987|ref|XP_003429815.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Ornithorhynchus anatinus]
Length = 540
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 24/217 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AG ++++ V +D + GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHVDVTEAMLYEKFSPAGSIISIRVCRDVASRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NIFIKNLDDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ G +
Sbjct: 129 KVVC---DEHGSRGFGFVHFETREAASQAISTMNGMLLNDRKV-----------GAQPCC 174
Query: 202 PAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANG 238
PA R+ + P S +SRP +GP Q NG
Sbjct: 175 PAGRVGSGKRPPSGRSRP-----AGPVPAQAVTSMNG 206
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 68/231 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV-- 85
++ NLD + + L++ F G +++ V D + +G+GFV F + E A AI
Sbjct: 102 FIKNLDDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETREAASQAISTMN 159
Query: 86 --------------------------------------------LNMIKLYGKPIRVNKA 101
+N +L G+ + V +A
Sbjct: 160 GMLLNDRKVGAQPCCPAGRVGSGKRPPSGRSRPAGPVPAQAVTSMNGKELNGRVLYVGRA 219
Query: 102 -----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
Q++ + G NL++ NLD +D++ L FS +G I T+ K+
Sbjct: 220 QKRTERQSELKRKFEQIKQERVNRYQGVNLYVKNLDDCIDDEKLRKEFSPYGTI-TSAKV 278
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
M ++G+S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ +
Sbjct: 279 M--TESGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 327
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q R Q YV NLD + +E L + F G + + V + + +G+GFV F
Sbjct: 236 IKQERVNRYQGVNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTE--SGHSKGFGFVCF 293
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
S E+A A+ +N + KP+ V A + ++ + N ++ L
Sbjct: 294 SSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMHRLS 340
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVG+LD V + L+++F Q G VV+V V +D T + GY +V F S DA A+++LN
Sbjct: 45 YVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEMLN 104
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 146
+ GKPIR+ +++D S G AN+FI NLD +D K LYDTFSAFG I++ K+
Sbjct: 105 FTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILS-CKVAT 163
Query: 147 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERI 206
+ +G S+G+GF+ Y+ E++ AI +NG L ++++ V +K + G+P
Sbjct: 164 EM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNN 222
Query: 207 LAANNPSSQKSRPH 220
+ N S + +
Sbjct: 223 VYVKNLSESTTEDN 236
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 21/191 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TE+ L ELF GP+ +V V + + +GFV F + +DA +A++
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAVHAVED 280
Query: 86 LNMIKLYGKPIRVNKAS-------QDKKSLDV----------GANLFIGNLDPDVDE-KL 127
LN K K + V +A Q K+S + G NL++ NLD VD+ +
Sbjct: 281 LNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEK 340
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ FG I T+ K+MRD + G ++G GF+++ S E + A+ AMNG+ + ++ + V+
Sbjct: 341 LKELFAEFGTI-TSCKVMRDSN-GVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVA 398
Query: 188 YAYKKDTKGER 198
A +K+ + R
Sbjct: 399 LAQRKEERRAR 409
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 162/385 (42%), Gaps = 42/385 (10%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ A ++ NLD + + L++ F G +++ V + ++ +GYGFV++ +E
Sbjct: 123 SSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATE-MSGESKGYGFVQYEQDE 181
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTF 132
A AI LN + L K + V + ++ +V N+++ NL E L + F
Sbjct: 182 SAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKELF 241
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I + I+ D G SR FGF+++++ + + A+E +NG+ ++++ V A KK
Sbjct: 242 GNFGPITS--VIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQKK 299
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF-------ASGPPSLQNAPQANGTVGGPVP 245
ER E +N ++ +++ L+ L+ GT+
Sbjct: 300 S---EREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKV 356
Query: 246 PRPYANGAASGP-ISAVRPPPPPPQA--------AAFPPMQVA-------GQAAWQGQPQ 289
R +NG G A + +A P+ VA +A Q Q
Sbjct: 357 MRD-SNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQFS 415
Query: 290 HIGQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPPPQ 349
+ +PVMPPP+ R P M PP P + + P P + QP Q P
Sbjct: 416 QM-----RPVMPPPVAPRMP--MYPPGVPGMGQQLFYGQPPPAFVNPQPGYGFQQHMIPG 468
Query: 350 QLLGRPPMPHMSMPPPPPPQAPPPP 374
G PMP+ MP Q P P
Sbjct: 469 MRPGVAPMPNFVMPMVQQGQQPQRP 493
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 16 QHSAERNQDATAYVGNLDPQV-TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+ +A+RNQ Y+ NLD V +E L ELF + G + + V +D +++G GFV F+
Sbjct: 315 KETADRNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFK 373
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
S EDA A+ +N + KP+ V A + ++
Sbjct: 374 SSEDATRALVAMNGKMVGSKPLYVALAQRKEE 405
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
L++G+LD V + L+D FS G +V+ ++ RD +T S G+ ++++ S + A+E
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVS-VRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 174 MN 175
+N
Sbjct: 103 LN 104
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 114/185 (61%), Gaps = 7/185 (3%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ YVG+L +TE L+E F AGPV+++ V +D +T GY +V F+ DA+ A
Sbjct: 9 QMASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERA 68
Query: 83 IKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+ +N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I+
Sbjct: 69 LDTMNFDTIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKKIDNKAMYDTFSAFGNIL 126
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ K+ +D + G S+G+GF+ +++ E+++ +IE +NG L +++ V + + +
Sbjct: 127 S-CKVAQD-EKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVFVGRFISRKEREKEL 184
Query: 200 GTPAE 204
G A+
Sbjct: 185 GEKAK 189
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 103/187 (55%), Gaps = 25/187 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVP-KDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N +TEE L E+F + G + + V KD + +G+GFV F + + A+ A++ L
Sbjct: 195 YVKNFGEDLTEEALHEMFEKYGSITSHRVMMKDGKS---RGFGFVAFENPDAAERAVQEL 251
Query: 87 NMIKLY-GKPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
N +L GK + V +A ++++ +++ G NL++ NLD +D++ L
Sbjct: 252 NAKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDERL 311
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F+ +G I T+ K+M D G S+GFGF+ + + + + A+ MNG+ + ++ + V+
Sbjct: 312 RKEFAPYGTI-TSAKVM--LDEGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVAL 368
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 369 AQRKEER 375
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VT+ L+ELF QAG VV+V V +D + GY +V F + DA A++
Sbjct: 37 TSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE 96
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN + L KPIRV +++D S G AN+FI NLD +D K L+DTFSAFG I++ K
Sbjct: 97 MLNFVPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILS-CK 155
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D D G S+GFGF+ Y+ E + +A++++NG + ++ + V
Sbjct: 156 VATD-DMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYV 197
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 24/198 (12%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFR 74
+S ++ + +V NL T+E L ++F + G + + V V D + +GF+ F
Sbjct: 208 NSFDKARFNNVFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTD---GKSRCFGFINFE 264
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIG 117
S +DA A++ LN K+ K +A + ++ +D+ G NL++
Sbjct: 265 SPDDAVRAVEELNGKKINDKEWYCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLK 324
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NLD + + L + FS FG I T+ K+MRD + G S+G GF+++ + E + AI MNG+
Sbjct: 325 NLDDGISDDQLRELFSTFGKI-TSCKVMRDQN-GVSKGSGFVAFSTREEASQAITEMNGK 382
Query: 178 YLCNRQITVSYAYKKDTK 195
L + + V++A +K+ +
Sbjct: 383 MLSGKPLYVAFAQRKEER 400
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+L++G+L+ V + LY+ FS G +V+ ++ RD ++ S G+ ++++ + + A+
Sbjct: 37 TSLYVGDLEASVTDSQLYELFSQAGQVVS-VRVCRDVNSRRSLGYAYVNFSNPMDAARAL 95
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
E +N L N+ I V Y+ +D R G+ I + K+ T A G
Sbjct: 96 EMLNFVPLNNKPIRVMYS-NRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFG 149
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 38/251 (15%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD D+D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDDIDDERLQKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA----ERILAANNPSSQKSRPHT 221
+ A+ MNG+ + + + V+ A +K+ ER +R+ + +Q++ P
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSG 401
Query: 222 LFASGPPSLQN 232
F + P QN
Sbjct: 402 YFMTAVPQTQN 412
>gi|156554126|ref|XP_001604025.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 627
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 115/182 (63%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDAVTRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + G+PIR+ + +D + VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDIIKGRPIRIMWSQRDPSLRRSGVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS-C 128
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
++ +D ++G+S+G+GF+ +++ EA++ +I+ +NG L +++ V + + + G
Sbjct: 129 RVAQD-ESGSSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFISRKEREKELGEK 187
Query: 203 AE 204
A+
Sbjct: 188 AK 189
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 12/189 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V +D + +GYGFV F +EE
Sbjct: 92 SLRRSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCRVAQDE-SGSSKGYGFVHFETEE 150
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A+ +I +N + L GK + V K S+ ++ ++G N+++ N D+ + L +
Sbjct: 151 AANKSIDRVNGMLLNGKKVYVGKFISRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKE 210
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F +G I T+ K+M D G SRGFGF++++ A+D A+ +NG+ + +I Y
Sbjct: 211 MFEKYGTI-TSHKVM-SKDDGKSRGFGFVAFEDPNAADRAVADLNGKEIAEGKIM--YVG 266
Query: 191 KKDTKGERH 199
+ K ER
Sbjct: 267 RAQKKAERQ 275
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV-PKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N +T++ L E+F + G + + V KD +G+GFV F AD A+ L
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKD--DGKSRGFGFVAFEDPNAADRAVADL 252
Query: 87 NMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLL 128
N ++ GK + V +A + K+ + G NL++ NLD +D++ L
Sbjct: 253 NGKEIAEGKIMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F+ FG I + +M D G S+GFGF+ + E + A+ MNG+ + ++ + V+
Sbjct: 313 RKEFAPFGTITSVKVMMED---GRSKGFGFVCFSLAEEATKAVTEMNGRIVGSKPLYVAL 369
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 370 AQRKEDR 376
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 105/171 (61%), Gaps = 3/171 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E LL+++F G V ++ V +D +T GY +V F E AI+
Sbjct: 40 ASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDYEAGRQAIE 99
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G+ N+FI NL D+D K L+DTFS FG I++ K
Sbjct: 100 KLNYTPIKGQPCRIMWSQRDPSLRKKGSGNIFIKNLHADIDNKALHDTFSVFGNILS-CK 158
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKD 193
I D TGNS+GFGF+ ++S EA+ AI+A+NG L +++ V+ + +KD
Sbjct: 159 IATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQEVYVAPHVSRKD 209
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N+ + E+ E F + PV +V++ KD L +G+GFV + + A A++ L
Sbjct: 224 VYIKNISLETPEQEFEEFFKKVAPVTSVHLEKDSEGKL-RGFGFVNYETHAGAAKAVEEL 282
Query: 87 NMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ +G+ + V +A + +K G NLFI NLD +D++ L
Sbjct: 283 NGVEFHGQQLHVGRAQKKYERQQELRRQYEQSKLEKMEKYQGVNLFIKNLDDSIDDERLR 342
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS FG I T+ K+M + G S+GFGF+ + + E + AI N Q + + + V+ A
Sbjct: 343 EEFSPFGTI-TSVKVM-TTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 400
Query: 190 YKKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 401 QRKDV---RRSQLAQQIQARNQMRYQQ 424
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL + + L + F G +++ + D VT +G+GFV F S+E A AI +N
Sbjct: 131 FIKNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAIN 190
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + R ++ S+ +++ N++I N+ + E+ + F VT
Sbjct: 191 GMLLNGQEVYVAPHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEFEEFFKKVAP-VT 249
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ + +D + G RGFGF++Y++ + A+E +NG +Q+ V A KK
Sbjct: 250 SVHLEKDSE-GKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKK 300
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 105/162 (64%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+P V+E L+E+F Q G VV++ V +D +T GY +V + + +DA A+++
Sbjct: 25 SLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDATRALEL 84
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ + +D G AN+FI NLD +D K L+DTF+AFG I++ K+
Sbjct: 85 LNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGNILS-CKV 143
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D +G S+G+GF+ ++ E++ AIE +NG L ++Q+ V
Sbjct: 144 ATDA-SGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFV 184
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL T++ L ++F GP+ + V +D + +GFV F +DA A++ L
Sbjct: 205 VYVKNLADVTTDDELKKVFGAWGPISSAVVMRDN-DGKSKCFGFVNFEHPDDAAKAVEAL 263
Query: 87 NMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLLY 129
K K R K S+ + L G NL++ NLD VD++ +
Sbjct: 264 QGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKIR 323
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ +G I T+ K+MRD G S+G GF+++ S + + A+ MNG+ + N+ + V+ A
Sbjct: 324 ELFAEYGTI-TSCKVMRDHQ-GQSKGSGFVAFSSPDEATRAVTEMNGKMVGNKPLYVALA 381
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 382 QRKEERRMR 390
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+L+P+V E LY+ FS G +V+ ++ RD T S G+ +++Y++ + +
Sbjct: 22 VSTSLYVGDLEPNVSEAQLYEMFSQVGQVVS-IRVCRDLITRRSLGYSYVNYNNAQDATR 80
Query: 170 AIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPP- 228
A+E +N + + I + +++ +D + GT I + K+ T A G
Sbjct: 81 ALELLNFTGVNGKPIRIMFSH-RDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGNIL 139
Query: 229 SLQNAPQANGTVGG 242
S + A A+G G
Sbjct: 140 SCKVATDASGQSKG 153
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q Y+ NLD V +E + ELF + G + + V +D +G GFV F S ++A
Sbjct: 301 EKYQGVNLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDH-QGQSKGSGFVAFSSPDEA 359
Query: 80 DYAIKVLNMIKLYGKPIRV 98
A+ +N + KP+ V
Sbjct: 360 TRAVTEMNGKMVGNKPLYV 378
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY V F DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+FI NL+ +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 V---SDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAE 182
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 14/189 (7%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NL+ + + L++ F G +++ V D N +G+GFV F +EE
Sbjct: 92 SLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEE 149
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYD 130
A+ AI+ +N + L + + V + SQ ++ ++G N++I N +D++ L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNG 209
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I++ K+M D + G S+GFGF+S++ E + A++ MNG+ L + I V A
Sbjct: 210 LFGRFGQILS-VKVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQ 267
Query: 191 KKDTKGERH 199
KKD +RH
Sbjct: 268 KKD---DRH 273
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N ++ +E L LF + G +++V V D +G+GFV F EDA A+ +N
Sbjct: 194 YIKNFGDRMDDETLNGLFGRFGQILSVKVMTDE-GGKSKGFGFVSFERHEDAQKAVDEMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+L GK I V +A +QDK G NL++ NLD +D++ L
Sbjct: 253 GKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPFGTI-TSTKVM--TEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 113/180 (62%), Gaps = 9/180 (5%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRS 75
AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 7 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMD 64
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++++L F
Sbjct: 65 MRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAF 124
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+AFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 125 AAFGTL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 183
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 49/211 (23%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+V +E+L + F G + + V D + +GYGF+ FR + DA+ AI +N
Sbjct: 107 FVGDLSPEVNDEVLAKAFAAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN 166
Query: 88 MIKLYGKPIRVNKASQDKKSL--------------------------------------- 108
L + IRVN A+Q +
Sbjct: 167 GEWLGSRAIRVNWANQKTQGAPPPRAGNGGNGSDGGHGGGGAPAPMNFQGGPLSYESVVQ 226
Query: 109 ---DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ +++GNL P + L F + G + +I D RGF F+ D+ E
Sbjct: 227 QTPAYNSTVYVGNLVPYATQADLIPLFQSIGYL---SEIRMQAD----RGFAFVKLDTHE 279
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
+ AI + GQ + R I S+ + G
Sbjct: 280 HAAMAIVQLQGQMVHGRPIKCSWGKDRADGG 310
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
++T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 232 NSTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADR------GFAFVKLDTHEHAAMAI 285
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDP 121
L ++G+PI K S K D GA L G + P
Sbjct: 286 VQLQGQMVHGRPI---KCSWGKDRADGGA-LTTGGMSP 319
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYV 171
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L E+F + G + + V + D +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 71 TMNFDLIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDRSIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D + G S+G+GF+ +++ EA++ +IE +NG L +++ V
Sbjct: 128 CKVAQD-ENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 171
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + +++ F G +++ V +D +GYGFV F +EE A+ +I+ +N
Sbjct: 102 FIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDE-NGTSKGYGFVHFETEEAANKSIEKVN 160
Query: 88 MIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L GK + V + + +K L A LF + N D+ E+ L F +G I T
Sbjct: 161 GMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDLTEEQLRTMFEKYGKI-T 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ-ITVSYAYKK 192
+ KIM D G S+GFGF++++S EA++ A+EA+NG+ + + + + V A KK
Sbjct: 220 SYKIM-SKDDGKSKGFGFVAFESPEAAETAVEALNGKEIIDGKPLYVGRAQKK 271
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 160/376 (42%), Gaps = 67/376 (17%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N +TEE L +F + G + + Y + +G+GFV F S E A+ A++ LN
Sbjct: 195 YVKNFGEDLTEEQLRTMFEKYGKITS-YKIMSKDDGKSKGFGFVAFESPEAAETAVEALN 253
Query: 88 MIKLY-GKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLY 129
++ GKP+ V +A + K+ + G NL++ NLD +D++ L
Sbjct: 254 GKEIIDGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDERLR 313
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I + +M D S+GFGF+ + S E + A+ MNG+ + ++ + V+ A
Sbjct: 314 KEFSPFGTITSAKVMMED---NRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 370
Query: 190 YKKDTKGERHGTPAERILAAN---NPSSQKSRPHTLFASG--------PPSLQNAPQANG 238
+K+ + + H T AN + Q +P T +SG P A Q
Sbjct: 371 QRKEDR-KAHLTSQYMQRMANIRMHQMGQFIQPGT--SSGYFVPTIPAPQRFYGAAQMAQ 427
Query: 239 TVGGP-----VPPRPYANGAAS--GPI-SAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQH 290
P P RP A G+A+ G I + R P PP +A +
Sbjct: 428 IRTNPRWPAQTPVRPGAQGSANPYGTIPTTYRAAPRPPNQSAALRSNI------------ 475
Query: 291 IGQGVPQPVM---PPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQ---- 343
VP+P+ PP +Q RP + P L + P Q + + Q P+
Sbjct: 476 ---NVPRPITGQQPPNIQGRPLASQAVVAPAGLGISNAAPVQQAVHIQGQEPLTATMLAA 532
Query: 344 -PPPPPQQLLGRPPMP 358
PP +Q+LG P
Sbjct: 533 APPQEQKQMLGERLFP 548
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 108/181 (59%), Gaps = 4/181 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E LL+++F GPV ++ V +D +T GY +V F E AI+
Sbjct: 50 ASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRTAIE 109
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D GA N+FI NL PD+D K L+DTFS FG I++ K
Sbjct: 110 KLNYSPIKGKPCRIMWSQRDPALRKKGAGNIFIKNLHPDIDNKALHDTFSVFGNILS-CK 168
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTP 202
I D +TG S+GFGF+ ++ A+ A++A+NG L R++ V+ + KKD + +
Sbjct: 169 IATD-ETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREVYVAQHVSKKDRESKLEEVK 227
Query: 203 A 203
A
Sbjct: 228 A 228
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 33/230 (14%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+ QH +++++++ YV N+D E+ LF + GP+ ++ + KD
Sbjct: 210 VAQHVSKKDRESKLEEVKANFTNVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGK 269
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------- 110
+G+GF+ F + +DA A++ LN ++ G+ + V +A + + L
Sbjct: 270 F-RGFGFINFENHDDAAKAVEELNDLEFKGQKLYVGRAQKKYERLQELKKQYEASRLEKL 328
Query: 111 ----GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
G NLF+ NLD +D++ L F+ FG I T+ K+MR+ + G S+ FGF+ + + E
Sbjct: 329 AKYQGVNLFVKNLDDSIDDEKLEAEFAPFGSI-TSAKVMRNEE-GKSKNFGFVCFSTPEE 386
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQK 216
+ AI N Q + + + V+ A +KD R A++I A N Q+
Sbjct: 387 ATKAITEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQLRYQQ 433
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF Q G V ++ V +D VT GY +V + S D + A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 115 ELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + G+S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 174 VAQD-ENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKD 223
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
++ NLD + + L + F G +++ V +D +GYGFV + ++E A AIK
Sbjct: 144 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-NGSSKGYGFVHYETDEAAQQAIKH 202
Query: 86 LNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L K + V K + K ++ AN +++ N+ P+V + + F G
Sbjct: 203 VNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNISPEVTDDEFRELFERHG-D 261
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE- 197
VT+ I R+ D G SRGFGF+++ + EA+ A+E +N + L +++ V A KK + E
Sbjct: 262 VTSSSIAREQD-GKSRGFGFVNFTTHEAAAKAVEELNNKDLHGQELYVGRAQKKHEREEE 320
Query: 198 -RHGTPAERILAA 209
R A RI A
Sbjct: 321 LRKSYEAARIEKA 333
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 19/138 (13%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N+ P+VT++ ELF + G V + + +++ +G+GFV F + E A A++
Sbjct: 237 NVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQ-DGKSRGFGFVNFTTHEAAAKAVEE 295
Query: 86 LNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLL 128
LN L+G+ + V +A + +K S G NL+I NLD DVD+ L
Sbjct: 296 LNNKDLHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVDDDKL 355
Query: 129 YDTFSAFGVIVTNPKIMR 146
F+ FG I T+ K+MR
Sbjct: 356 RIMFAEFGPI-TSAKVMR 372
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 108/171 (63%), Gaps = 9/171 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADYAIK 84
YVGNL P+VT+ +L E+F AGPVV+ + +DR N G YGFVE+ AD A+
Sbjct: 25 YVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFNYGFVEYADMRSADQALT 82
Query: 85 VLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN K++ IRVN A +Q+K+ ++F+G+L P+V++ +L F AFG + +
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSL-SE 141
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D ++G SRG+GF+S+ ++ AI +MNG++L +R I V++A +K
Sbjct: 142 ARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQK 192
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + +VG+L P+V +++L + F G + V D + +GYGF+ FR
Sbjct: 104 QNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRD 163
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+ DA+ AI +N L + IRVN A+Q
Sbjct: 164 KADAEQAIASMNGEWLGSRAIRVNWANQ 191
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G +V + + DR G+ FV+ + ++A AI
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADR------GFAFVKLDTHQNAALAI 309
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGA 112
L ++G+PI+ + +DK S++ GA
Sbjct: 310 THLQNQLVHGRPIKCSWG-KDKGSMEGGA 337
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYV 171
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L E+F + G + + V + D +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+F+ NLD ++ K LYDT SAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLDKSINNKALYDTVSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E
Sbjct: 129 NVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G +++ V D N +GYGFV F + E A+ AIK +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 38/251 (15%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+GQ + + ++A Y+ N + +E L +LF + GP ++V V D +
Sbjct: 169 FVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-S 227
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDK 105
+G+GFV F EDA A+ +N +L GK I V +A QD+
Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDR 287
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
+ NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E
Sbjct: 288 ITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPE 344
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA----ERILAANNPSSQKSRPHT 221
+ A+ MNG+ + + + V+ A +K+ ER +R+ + +Q++ P
Sbjct: 345 EATKAVTEMNGRIVATKPLYVALAQRKE---ERQAYLTNEYMQRMASVRAVPNQRAPPSG 401
Query: 222 LFASGPPSLQN 232
F + P QN
Sbjct: 402 YFMTAVPQTQN 412
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYV 171
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L ++F + G + + V + D +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYV 171
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L E+F + G + + V + D +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYV 171
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L E+F + G + + V + D +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + ++ S G NL++ NLD ++++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I + +M D G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRREFAPFGTITSAKVMMED---GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++
Sbjct: 58 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 117
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 118 DLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS-CK 176
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD
Sbjct: 177 VAQD-EYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKD 226
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N
Sbjct: 149 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGN-SKGYGFVHYETAEAATNAIKHVN 207
Query: 88 MIKLYGKPIRVNK--ASQDKKSL--DVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V A +D++S ++ AN +++ N++ DV ++ F +G I T
Sbjct: 208 GMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEI-T 266
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ + RD +TG SRGFGF+++ EA+ AA+EA+N L +++ V A KK + E R
Sbjct: 267 SATLSRDNETGKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELR 326
Query: 199 HGTPAERILAAN 210
A RI A+
Sbjct: 327 KQYEAARIEKAS 338
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G H A++++ + YV N++ VT+E LF + G + + + +D T
Sbjct: 217 FVGHHIAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNET 276
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV F E A A++ LN +L G+ + V +A + +K
Sbjct: 277 GKSRGFGFVNFSDHEAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEK 336
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
S G NL+I NL D+D++ L + FS++G I T+ K+MR+
Sbjct: 337 ASKYQGVNLYIKNLSDDIDDEKLRELFSSYGNI-TSAKVMRE 377
>gi|47933430|gb|AAT39343.1| polyadenylate binding protein [Oikopleura dioica]
Length = 610
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 7/194 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L++ F +GPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKPIR+ + +D G N+FI NLD +D K LYDTFS+FG I++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKV 121
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
+ D S+GFGF+ Y+S E++ AIE +NG + ++++ V+ ++ + G A
Sbjct: 122 VC---DINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAA 178
Query: 204 ER---ILAANNPSS 214
+ + N P S
Sbjct: 179 KHFTNLFVKNLPDS 192
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + L++ F G +++ V D N +G+GFV + S+E
Sbjct: 83 SLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDE 140
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A AI+ +N + + K + V + S++ + + G NLF+ NL D L
Sbjct: 141 SAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLK 200
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG +V++ K++ D TG S+ GFIS+ + ++AA+E M+ + + +++ A
Sbjct: 201 NFEQFGEVVSH-KVICDETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQ 259
Query: 191 KKDTKGERHGTPAERI 206
KK + E+I
Sbjct: 260 KKAERSSELKAKYEKI 275
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 62/229 (27%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NL + L + F Q G VV+ V D T L + +GF+ F+ + A+ A+++++
Sbjct: 185 FVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIMH 244
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ GK + + K Q++ G NL++ NLD +D++ L +
Sbjct: 245 EKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGLRE 304
Query: 131 TFSAFGVIVTNPKIMRDPD----------------------------------------- 149
F FG I T+ K++ D +
Sbjct: 305 AFKQFGNI-TSAKVITDLNEKDEVGQAKSDQAPEEEGEAVEEKKTEDSEAAGDAPGPEKP 363
Query: 150 ---TGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + S E + A+ MNG+ + + V A +K+ +
Sbjct: 364 VSKKGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQRKEDR 412
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L P VTE +L+E F AGPV+++ V +D + L GY +V F+ DA+ A+
Sbjct: 55 ASLYIGDLHPDVTESMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALD 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N ++G+P+R+ + +D + G N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 115 TMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILS-CK 173
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + GNS+G+GF+ +++ ++ AIE +NG L ++++ V
Sbjct: 174 VATDEE-GNSKGYGFVHFETEASALTAIEKVNGMLLSDKKVFV 215
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+A R + ++ NLD + + +++ F G +++ V D N +GYGFV F +E
Sbjct: 136 AARRAGNGNIFIKNLDRVIDNKSIYDTFSLFGNILSCKVATDEEGN-SKGYGFVHFETEA 194
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVG----ANLFIGNLDPDVDEKLLYD 130
A AI+ +N + L K + V K +Q K L N+FI N +DEK L +
Sbjct: 195 SALTAIEKVNGMLLSDKKVFVGKFQPRAQRMKELGESGLKYTNVFIKNFGDHLDEKKLTE 254
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +G I T+ +M D ++G +GFGF+++ +A+ A++ +N L + +S
Sbjct: 255 MFSKYGEI-TSAVVMTD-NSGKPKGFGFVAFVDPDAAIKAVDTLNESTLEGTDLKLSVC- 311
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFA 224
+ K ER + A Q+ + L+
Sbjct: 312 RAQKKSERTAELKRKYEALKQERVQRYQGVNLYV 345
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ N + E+ L E+F + G + + V D + +G+GFV F + A A+ L
Sbjct: 238 VFIKNFGDHLDEKKLTEMFSKYGEITSAVVMTDN-SGKPKGFGFVAFVDPDAAIKAVDTL 296
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV-------------------GANLFIGNLDPDVDEKL 127
N L G ++++ KKS G NL++ N++ ++ +
Sbjct: 297 NESTLEGTDLKLSVCRAQKKSERTAELKRKYEALKQERVQRYQGVNLYVKNIEEEMTDDG 356
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ FG I T+ K+M D + G S+GFGF+ ++ E + AA+ MN + + + + V+
Sbjct: 357 LREHFANFGSI-TSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTEMNSKMIGAKPLYVA 414
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 415 LAQRKEDR 422
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 7/194 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P +TE +L++ F +GPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKPIR+ + +D G N+FI NLD +D K LYDTFS+FG I++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKV 121
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
+ D S+GFGF+ Y+S E++ AIE +NG + ++++ V+ ++ + G A
Sbjct: 122 V---CDINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAA 178
Query: 204 ER---ILAANNPSS 214
+ + N P S
Sbjct: 179 KHFTNLFVKNLPDS 192
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + L++ F G +++ V D N +G+GFV + S+E
Sbjct: 83 SLRRSGQGNVFIKNLDRSIDNKALYDTFSSFGNILSCKVVCD--INGSKGFGFVHYESDE 140
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A AI+ +N + + K + V + S++ + + G NLF+ NL D L
Sbjct: 141 SAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLK 200
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG +V++ K++ D TG S+ GFIS+ + ++AA+E M+ + + +++ A
Sbjct: 201 NFEQFGEVVSH-KVICDETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQ 259
Query: 191 KKDTKGERHGTPAERI 206
KK + E+I
Sbjct: 260 KKAERSSELKAKYEKI 275
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NL + L + F Q G VV+ V D T L + +GF+ F+ + A+ A+++++
Sbjct: 185 FVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIMH 244
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ GK + + K Q++ G NL++ NLD +D++ L +
Sbjct: 245 EKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGLRE 304
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ K++ D + G S+GFGF+ + S E + A+ MNG+ + + V A
Sbjct: 305 AFKQFGNI-TSAKVITDLN-GRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ 362
Query: 191 KKDTK 195
+K+ +
Sbjct: 363 RKEDR 367
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYV 171
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L ++F + G + + V + D + +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKS---RGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V +
Sbjct: 129 KVVC---DEHGSRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGH 172
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQNAISTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ +++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD D+G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRD-DSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVVNMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYV 171
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L E+F + G + + V + D +G+GFV F + A+ A+
Sbjct: 195 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 251
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 252 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 311
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 312 LRKEFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 368
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 369 LAQRKEDR 376
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 108/171 (63%), Gaps = 9/171 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADYAIK 84
YVGNL P+VT+ +L E+F AGPVV+ + +DR N G YGFVE+ A+ A+
Sbjct: 25 YVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDR--NFQHGGFNYGFVEYADMRSAEQALT 82
Query: 85 VLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN K++ IRVN A +Q+K+ ++F+G+L P+V++ +L F AFG + +
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSL-SE 141
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D ++G SRG+GF+S+ ++ AI +MNG++L +R I V++A +K
Sbjct: 142 ARVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQK 192
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + +VG+L P+V +++L + F G + V D + +GYGF+ FR
Sbjct: 104 QNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEARVMWDMNSGKSRGYGFLSFRD 163
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+ DA+ AI +N L + IRVN A+Q
Sbjct: 164 KADAEQAIASMNGEWLGSRAIRVNWANQ 191
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G +V + + DR G+ FV+ + ++A AI
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADR------GFAFVKLDTHQNAALAI 309
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGA 112
L ++G+PI+ + +DK S++ GA
Sbjct: 310 THLQNQLVHGRPIKCSWG-KDKGSMEGGA 337
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q + YVG+LD V + L+++F Q G VV+V V +D T L GY +V F S DA A
Sbjct: 37 QATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARA 96
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+++LN + GKPIR+ +++D S G AN+FI NLD +D K LYDTFS FG I++
Sbjct: 97 LEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILS- 155
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ + +G S+G+GF+ ++ EA+ AI +NG L ++++ V +K + G
Sbjct: 156 CKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGN 214
Query: 202 PAERILAANNPSSQKSRPH 220
P + N S + +
Sbjct: 215 PKFNNVYVKNLSESTTEDN 233
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 21/191 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TE+ L E+F + GP+ +V V ++ + +GFV F + +DA A++
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVED 277
Query: 86 LNMIKLYGKP---IRVNKASQDKKSL--------------DVGANLFIGNLDPDVDE-KL 127
LN K K R K S+ + L + G NL++ NLD +D+ +
Sbjct: 278 LNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEK 337
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ FG I T+ K+MRD + G S+G GF+++ S E + A+ AMNG+ + ++ + V+
Sbjct: 338 LKEIFADFGTI-TSCKVMRDLN-GVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
Query: 188 YAYKKDTKGER 198
A +K+ + R
Sbjct: 396 LAQRKEERRAR 406
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 11/211 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ A ++ NLD + + L++ F G +++ V + ++ +GYGFV+F EE
Sbjct: 120 SSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATE-MSGESKGYGFVQFELEE 178
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTF 132
A AI LN + L K + V + ++ +V N+++ NL E L + F
Sbjct: 179 AAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIF 238
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ +MR+ D G SR FGF+++++ + + A+E +NG+ +++ V A KK
Sbjct: 239 GKFGPI-TSVVVMREGD-GKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKK 296
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
ER E+ ++ K++ L+
Sbjct: 297 S---EREMELKEKFEKNIKEAADKNQGTNLY 324
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 16 QHSAERNQDATAYVGNLDPQV-TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+ +A++NQ Y+ NLD + +E L E+F G + + V +D + + +G GFV F+
Sbjct: 312 KEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRD-LNGVSKGSGFVAFK 370
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
S EDA A+ +N + KP+ V A + ++
Sbjct: 371 SAEDASRALVAMNGKMIGSKPLYVALAQRKEE 402
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 104/171 (60%), Gaps = 2/171 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L P V E LL+E+F GPV ++ V +D VT GY +V F DA+ A+
Sbjct: 40 SLYVGDLAPDVNESLLFEIFSAVGPVASIRVCRDAVTRRSLGYSYVNFHQMADAERAMDT 99
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
+N + GKP R+ + +D G N+F+ NL+ +D K LYDTFS FG I++ K+
Sbjct: 100 MNFSMIKGKPCRIMWSQRDPSLRRSGVGNIFVKNLNEAIDNKQLYDTFSLFGNILS-CKV 158
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S G+G++ Y++ EA++AAIE ++G + +++ V + +++ +
Sbjct: 159 VTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQVGHFMRRNDR 209
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 27/194 (13%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N+ + + L + F Q G V++ V ++ TN G+GF+ F E A A++ L
Sbjct: 218 CYIKNVPYEWDDARLNQEFAQFGEVLSATVSRED-TNQTLGFGFINFAEHESAVAAVEAL 276
Query: 87 N----MIKLYGKPI-------RVNKASQDKKSLDV--------------GANLFIGNLDP 121
N L G+ I R K S+ ++ L G NL++ NLD
Sbjct: 277 NGKEYTTTLDGEEITQQIYVGRAQKKSERERELRAKFEAEKMDRISKFQGVNLYVKNLDD 336
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
V + +L D F+ G I T+ ++M+D G SRGFGF+ Y + E S A+ MNG+ + N
Sbjct: 337 SVTDDMLRDEFAVMGTI-TSARVMKDAKDGRSRGFGFVCYSTPEESTRAVNEMNGKLIAN 395
Query: 182 RQITVSYAYKKDTK 195
+ I V+ A +++ +
Sbjct: 396 KPIFVALAQRREVR 409
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 14/208 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NL+ + + L++ F G +++ V DR + GYG+V + + E
Sbjct: 120 SLRRSGVGNIFVKNLNEAIDNKQLYDTFSLFGNILSCKVVTDREGGVSMGYGYVHYETAE 179
Query: 78 DADYAIKVLNMIKLYGKPIRVNK--ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
A+ AI+ L+ + + G+ ++V D+ +D N +I N+ + D+ L F+ F
Sbjct: 180 AANAAIEKLDGMLIDGQEVQVGHFMRRNDRPDIDSWTNCYIKNVPYEWDDARLNQEFAQF 239
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ----YLCNRQITVS-YAY 190
G +++ + R+ DT + GFGFI++ E++ AA+EA+NG+ L +IT Y
Sbjct: 240 GEVLS-ATVSRE-DTNQTLGFGFINFAEHESAVAAVEALNGKEYTTTLDGEEITQQIYVG 297
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSR 218
+ K ER ER L A + + R
Sbjct: 298 RAQKKSER-----ERELRAKFEAEKMDR 320
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q YV NLD VT+++L + F G + + V KD +G+GFV + + E++ A
Sbjct: 325 QGVNLYVKNLDDSVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRA 384
Query: 83 IKVLNMIKLYGKPIRVNKASQ 103
+ +N + KPI V A +
Sbjct: 385 VNEMNGKLIANKPIFVALAQR 405
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E F AGP+++V V +D +++ GYG+V F EDA +A+
Sbjct: 19 ASLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHALN 78
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N L+GKP+R+ +D G N+F+ +LD +D K LYD F+ FG I++
Sbjct: 79 TMNFDVLHGKPVRIMWCHRDPSLRRSGVGNVFVNHLDASIDNKELYDLFAGFGTILSCKV 138
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D +G GF+ +++ EA+D AI+ MNG + R++ V
Sbjct: 139 V---SDENGPKGHGFVHFETREAADKAIKEMNGSLVKERKVFV 178
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 29/214 (13%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ A+ Q YV N T+E L E+F Q GP+ +V + D + +G+GF+ F
Sbjct: 190 ERRAKMEQFTNVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDD-SGKSKGFGFIRFEC 248
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGN 118
DA AI+ +N + G+ I V++A + K+ + G +LF+ N
Sbjct: 249 HADAKRAIEEVNGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHGMSLFVKN 308
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
L D++ L F+ FG + + I++ G +GFGF+S+ S E + A+E M+G+
Sbjct: 309 LAESTDDEHLRKIFAPFGTVTSAKVIVKG---GRRKGFGFVSFSSREEAKKAVEEMHGKM 365
Query: 179 LCNRQITVSYA-YKKDTK-------GERHGTPAE 204
L R + VSYA YK++ + G++ +PA+
Sbjct: 366 LSARPLYVSYARYKQERRAYFASYYGKKKASPAK 399
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 102/185 (55%), Gaps = 11/185 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V +LD + + L++LF G +++ V D N +G+GFV F + E
Sbjct: 100 SLRRSGVGNVFVNHLDASIDNKELYDLFAGFGTILSCKVVSDE--NGPKGHGFVHFETRE 157
Query: 78 DADYAIKVLN--MIK----LYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYD 130
AD AIK +N ++K G+ R N+ +++++ ++ N+++ N ++ L +
Sbjct: 158 AADKAIKEMNGSLVKERKVFVGQFKRPNQREEERRAKMEQFTNVYVKNFADGTTDEYLLE 217
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +G + ++ KIM D D+G S+GFGFI ++ + AIE +NG+ R+I VS A
Sbjct: 218 IFSQYGPL-SSVKIMTD-DSGKSKGFGFIRFECHADAKRAIEEVNGKQFGGRKIYVSRAQ 275
Query: 191 KKDTK 195
KK +
Sbjct: 276 KKKER 280
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V +
Sbjct: 129 KVVC---DDHGSRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFVGH 172
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAQQAITTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ +++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQGLQDLFSRFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD D+G+SRGFGF+++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRD-DSGHSRGFGFVNFQKHEEAQKAVMDMNGKEVSGRLLYVGRAQKR 269
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 102/185 (55%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF + G +++V V +D + +G+GFV F+ E+A A+ +N
Sbjct: 194 YVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDD-SGHSRGFGFVNFQKHEEAQKAVMDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ L + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRILGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 113/191 (59%), Gaps = 3/191 (1%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+ G +A +A+ YVG+LD + E L++LF Q PV+++ V +D+ GY +V
Sbjct: 1 MTGHTAAAGFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVN 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDT 131
F S +DA A++ LN L GKPIR+ + +D G AN+FI NLDP +D K L DT
Sbjct: 61 FASPQDATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDT 120
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
F+AFG +++ KI D + G S+G+GF+ ++ EA+ AI+ +NG + ++Q+ V +
Sbjct: 121 FAAFGTVLS-CKIALD-NNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVR 178
Query: 192 KDTKGERHGTP 202
+ +G+P
Sbjct: 179 HQERNRGNGSP 189
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL T++ L +F + G + + V +D + + + +GFV F+S + A A++ L
Sbjct: 194 VYVKNLSETTTDDDLKNIFGKYGSITSAVVMRD-ASGMSKCFGFVNFQSSDSAAAAVEHL 252
Query: 87 N-------MIKLYGKPIRVN--------KASQDKKSLD---VGANLFIGNLDPDVDEKLL 128
N + GK R + K Q++K+ G NL++ NLD V+++ L
Sbjct: 253 NGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKL 312
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG I T+ K+M DP G S+G GF+++ + E + A+ MNG+ + + + V+
Sbjct: 313 KELFSEFGTI-TSCKVMLDPQ-GLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAV 370
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 371 AQRKEERKAR 380
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
++ E+ + Y+ NLD V +E L ELF + G + + V D L +G GFV F +
Sbjct: 287 KNKFEKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLD-PQGLSKGSGFVAFLT 345
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ V+N + KP+ V A + ++
Sbjct: 346 PEEATRALNVMNGKMIGRKPLYVAVAQRKEE 376
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 113/180 (62%), Gaps = 9/180 (5%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRS 75
AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 5 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMD 62
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++++L F
Sbjct: 63 MRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAF 122
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
SAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 123 SAFGTM-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 181
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 53/226 (23%)
Query: 17 HSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ ++N++ T +VG+L P+V +E+L + F G + + V D + +GYGF+
Sbjct: 89 YQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSRGYGFL 148
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK---------------SLDVG----- 111
FR + DA+ AI +N L + IRVN A+Q + ++ G
Sbjct: 149 AFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPTTTASSPRPGGAVTTGSAPAP 208
Query: 112 ---------------------ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
+ +++GNL P + L F + G + +I D
Sbjct: 209 INFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD- 264
Query: 151 GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
RGF F+ D+ E + AI + GQ + R I S+ + G
Sbjct: 265 ---RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGG 307
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++ LN
Sbjct: 47 YVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQLN 106
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 146
+ + R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K+
Sbjct: 107 YSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS-CKVAT 165
Query: 147 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
D + G S+G+GF+ Y++ EA++ AI+A+NG L ++++ V Y + +
Sbjct: 166 D-EHGRSKGYGFVHYETGEAAETAIKAVNGMLLNDKKVYVGYHISRKER 213
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q Y+ NLD VT++ E+F + G V + V D N +G+GFV + E+A
Sbjct: 221 KAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGN-SKGFGFVNYEHHEEAQ 279
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ L+ + GK + V++A + +K S G NL+I NL+ DV
Sbjct: 280 SAVDALHDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDV 339
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L F FG I T+ K+MRD D S+GFGF+ + S + + A+ MN + + ++
Sbjct: 340 DDEKLRAEFEPFGTI-TSCKVMRD-DKSTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKP 397
Query: 184 ITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 398 LYVSLAQRREVR 409
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D +GYGFV + + E A+ AIK +N
Sbjct: 135 FIKNLDEQIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETGEAAETAIKAVN 193
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A NL+I NLD V + + F +G + +
Sbjct: 194 GMLLNDKKVYVGYHISRKERQSKLDEMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTS 253
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I++ + GNS+GFGF++Y+ E + +A++A++ + +++ VS A KK + E
Sbjct: 254 --AIVQVDEEGNSKGFGFVNYEHHEEAQSAVDALHDTDIRGKKLFVSRAQKKAEREE 308
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + + A+E
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQ 104
Query: 174 MNGQYLCNRQITVSYAYK 191
+N + NR + ++ +
Sbjct: 105 LNYSLIKNRACRIMWSQR 122
>gi|366989575|ref|XP_003674555.1| hypothetical protein NCAS_0B00950 [Naumovozyma castellii CBS 4309]
gi|342300419|emb|CCC68179.1| hypothetical protein NCAS_0B00950 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 20/202 (9%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGN+DP+VT+E L+ELF+Q P+ + PKD++ +HQGY F+EF + +D Y I
Sbjct: 9 ETTVYVGNIDPKVTKEQLYELFIQVSPISKLRYPKDKILQMHQGYAFIEFYTAKDVQYVI 68
Query: 84 KVL-NMIKLYGKPIRVNKASQDKKSLDVGAN---------------LFIGNLDPDVDEKL 127
+V+ N + LY + ++V ++ Q+ S GAN LF+ NLD ++
Sbjct: 69 QVMNNTVALYDRFLKVRQSVQNPTSSMGGANTSENSNQSIVLPIAKLFVKNLDESIENPQ 128
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F FG + +P+I G R +I + +E SD AI +N + + N++I V
Sbjct: 129 LIKLFQKFGPLFKDPEIFF-LSNGKLRC-AYIYFKFYENSDMAIAKLNNELIVNKRINVD 186
Query: 188 YAYKKDT--KGERHGTPAERIL 207
YA+K++T K ++G +R+L
Sbjct: 187 YAFKENTSNKNAKYGDDVDRLL 208
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 113/180 (62%), Gaps = 9/180 (5%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRS 75
AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 8 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMD 65
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++++L F
Sbjct: 66 MRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAF 125
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
SAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 126 SAFGTM-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 184
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 53/229 (23%)
Query: 17 HSAERNQDAT-----AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ ++N++ T +VG+L P+V +E+L + F G + + V D + +GYGF+
Sbjct: 92 YQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFL 151
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK------------------------- 106
FR + DA+ AI +N L + IRVN A+Q +
Sbjct: 152 AFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQG 211
Query: 107 ---SLD--------VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG 155
S D + +++GNL P + L F + G + +I D RG
Sbjct: 212 GPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD----RG 264
Query: 156 FGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAE 204
F F+ D+ E + AI + GQ + R I S+ K GT A+
Sbjct: 265 FAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG-----KDRADGTTAQ 308
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 35/201 (17%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG---FGFISYDSFEASD 168
A+L++GNL P V E +L + F+ G V + KI+ PD G +GF+ Y A++
Sbjct: 14 AHLYVGNLSPRVTEYMLTEIFAVAGP-VQHVKII--PDRNYQHGGLNYGFVEYMDMRAAE 70
Query: 169 AAIEAMNGQYLCNRQITVSYAY-----KKDTKGERH----------------------GT 201
A++ +NG+ + + +I V++AY K+DT G H GT
Sbjct: 71 TALQTLNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGT 130
Query: 202 PAE-RILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRP-YANGAASGPIS 259
++ R++ N + F + Q NG G R +AN G ++
Sbjct: 131 MSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVA 190
Query: 260 AVRPPPPPPQAAAFPPMQVAG 280
PP P A P+ G
Sbjct: 191 VASPPRPGATGGAPAPINFQG 211
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPVRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 129 KVVC---DDHGSRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGH-FK--SRREREAE 182
Query: 202 PAERILAANN 211
R + N
Sbjct: 183 LGARAMEFTN 192
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAHQAIATMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD D G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRD-DIGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKR 269
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 148/326 (45%), Gaps = 67/326 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGH-SRGFGFVNFEKHEEAQKAVMDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
+K+ ER N Q R T+ A G P L
Sbjct: 370 RKE----------ERKAILTNQYMQ--RLSTVRALGGPLL-------------------- 397
Query: 251 NGAASGPISAVRP--PPPPPQAAAF---PPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQ 305
G+ P S P P PP QAA + P +Q A + W QP + V PP M
Sbjct: 398 -GSFQQPASYFLPAVPQPPAQAAYYASSPSVQPAPR--WTAQPPRVSSA--SMVRPPAML 452
Query: 306 FRPPPNMPPPPPPQLASAMQRPPPQP 331
RPP + ++ Q PPP P
Sbjct: 453 RRPPAQVNSVRQ----ASTQVPPPGP 474
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADY 81
A YVGNL P+VTE +L E+F AGPV V + DR N G YGFVE+ A+
Sbjct: 109 AHLYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDR--NFQHGGLNYGFVEYYEMRSAET 166
Query: 82 AIKVLNMIKLYGKPIRVNKASQD-----KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFG 136
A++ L K++ IRVN A Q+ K+ L ++F+G+L P+V++++L F+AFG
Sbjct: 167 ALQTLGGRKIFDTEIRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAFAAFG 226
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
+ ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K+
Sbjct: 227 SL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKN 282
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 43/197 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+V +E+L + F G + + V D + +GYGF+ FR + DA+ AI +N
Sbjct: 205 FVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN 264
Query: 88 MIKLYGKPIRVNKASQDKKSLDV------------------------------------G 111
L + IRVN A+Q + +
Sbjct: 265 GEWLGSRAIRVNWANQKNQGMAATPGAVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYN 324
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
++ GNL P + L F FG IV +I D RGF F+ D+ E + AI
Sbjct: 325 TTVYTGNLVPYSTQADLIPLFQGFGYIV---EIRMQAD----RGFAFVKMDTHENAAMAI 377
Query: 172 EAMNGQYLCNRQITVSY 188
+ G + R + S+
Sbjct: 378 VNLTGTPVHGRPLKCSW 394
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T Y GNL P T+ L LF G +V + + DR G+ FV+ + E+A AI
Sbjct: 324 NTTVYTGNLVPYSTQADLIPLFQGFGYIVEIRMQADR------GFAFVKMDTHENAAMAI 377
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLD 109
L ++G+P++ + +D+ S D
Sbjct: 378 VNLTGTPVHGRPLKCSWG-KDRASAD 402
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 49 ASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 108
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 109 QLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLS-CK 167
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S+G+GF+ Y++ EA++ AI+A+NG L ++++ V + K +
Sbjct: 168 VATD-EQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISKKER 218
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q YV NLDP+V+ E +LF Q G V + + D N +G+GFV F E+A
Sbjct: 226 RAQFTNIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGN-SKGFGFVNFEFHEEAQ 284
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ L+ + G+ + V++A + +K S G NL+I NLD ++
Sbjct: 285 NAVDGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGVNLYIKNLDDEI 344
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L F FG I T+ K+MRD + G+S+GFGF+ + S + + A+ MN + + +
Sbjct: 345 DDERLRAEFEPFGTI-TSAKVMRD-EKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKP 402
Query: 184 ITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 403 LYVSLAQRREVR 414
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G V++ V D +GYGFV + + E A+ AIK +N
Sbjct: 140 FIKNLDEAIDNKALHDTFAAFGNVLSCKVATDE-QGRSKGYGFVHYETAEAAETAIKAVN 198
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ A N+++ NLDP+V + F FG + +
Sbjct: 199 GMLLNDKKVYVGHHISKKERQSKLDEIRAQFTNIYVKNLDPEVSLEEFTQLFEQFGNVTS 258
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+++ + GNS+GFGF++++ E + A++ ++ R++ VS A KK + E
Sbjct: 259 --AVIQTDEEGNSKGFGFVNFEFHEEAQNAVDGLHDTEYNGRKLFVSRAQKKAEREE 313
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VT+ L+ELF QAG VV+V V +D + GY +V + + DA A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L KPIRV +++D S G AN+FI NLD +D K L+DTFSAFG I++ K
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILS-CK 240
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D D G S+GFGF+ Y+ E++ +A++++NG + ++ + V
Sbjct: 241 VAMD-DIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYV 282
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
+S+++ + +V NL T+E L ++F + G + + V + + +GFV F S
Sbjct: 293 NSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIG-MDGKSRCFGFVNFESP 351
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGNL 119
+DA A++ LN K+ K V +A + ++ +D+ G NL++ NL
Sbjct: 352 DDAARAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNL 411
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D + + L + FS FG I T+ KIMRD + G S+G GF+S+ + E + A+ MNG+ +
Sbjct: 412 DDGITDDQLRELFSNFGKI-TSCKIMRDQN-GVSKGSGFVSFSTREEASQALTEMNGKMI 469
Query: 180 CNRQITVSYAYKKDTK 195
+ + V++A +K+ +
Sbjct: 470 SGKPLYVAFAQRKEER 485
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+L++G+L+ +V + LY+ FS G +V+ ++ RD ++ S G+ +++Y + + A+
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVS-VRVCRDVNSRRSLGYAYVNYSNPMDAARAM 180
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
EA+N L N+ I V Y+ +D R G+ I + K+ T A G
Sbjct: 181 EALNFAPLNNKPIRVMYS-NRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFG 234
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPVRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 129 KVVC---DDHGSRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGH-FK--SRREREAE 182
Query: 202 PAERILAANN 211
R + N
Sbjct: 183 LGARAMEFTN 192
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAHQAIATMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD D G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRD-DIGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKR 269
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 148/326 (45%), Gaps = 67/326 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGH-SRGFGFVNFEKHEEAQKAVMDMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
+K+ ER N Q R T+ A G P L
Sbjct: 370 RKE----------ERKAILTNQYMQ--RLSTVRALGGPLL-------------------- 397
Query: 251 NGAASGPISAVRP--PPPPPQAAAF---PPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQ 305
G+ P S P P PP QAA + P +Q A + W QP + V PP M
Sbjct: 398 -GSFQQPASYFLPAVPQPPAQAAYYASSPSVQPAPR--WTAQPPRVSSA--SMVRPPAML 452
Query: 306 FRPPPNMPPPPPPQLASAMQRPPPQP 331
RPP + ++ Q PPP P
Sbjct: 453 RRPPAQVNSVRQ----ASTQVPPPGP 474
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 112/181 (61%), Gaps = 9/181 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFR 74
+AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 6 TAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYM 63
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDT 131
A+ A++ LN K++ IRVN A Q K+ ++F+G+L P+V++ +L
Sbjct: 64 DMRAAETALQTLNGRKIFDTEIRVNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKA 123
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FSAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +
Sbjct: 124 FSAFGTL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 182
Query: 192 K 192
K
Sbjct: 183 K 183
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 39/201 (19%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+V + +L + F G + + V D + +GYGF+ FR + DA+ AI +N
Sbjct: 107 FVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN 166
Query: 88 MIKLYGKPIRVNKASQDKKSL--------------------------------DVGANLF 115
L + IRVN A+Q + ++
Sbjct: 167 GEWLGSRAIRVNWANQKTQGAPAPRPTGAGGAPAPINFQGGPLSYETVVQQTPAYNTTVY 226
Query: 116 IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
+GNL P + L F + G + +I D RGF F+ D+ E + AI +
Sbjct: 227 VGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD----RGFAFVKLDTHENAAMAIVQLQ 279
Query: 176 GQYLCNRQITVSYAYKKDTKG 196
GQ + R I S+ + G
Sbjct: 280 GQMVHGRPIKCSWGKDRADGG 300
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G + + + DR G+ FV+ + E+A AI
Sbjct: 222 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADR------GFAFVKLDTHENAAMAI 275
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG 111
L ++G+PI K S K D G
Sbjct: 276 VQLQGQMVHGRPI---KCSWGKDRADGG 300
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 113/180 (62%), Gaps = 9/180 (5%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRS 75
AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 11 AEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYLD 68
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTF 132
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++++L F
Sbjct: 69 MRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAF 128
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+AFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 129 AAFGTM-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 187
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 55/228 (24%)
Query: 17 HSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ ++N++ T+ +VG+L P+V +E+L + F G + + V D + +GYGF+
Sbjct: 95 YQGQQNKEDTSGHFHVFVGDLSPEVNDEVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFL 154
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL----------------------- 108
FR + DA+ AI +N L + IRVN A+Q +
Sbjct: 155 AFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAVGAGAPAPRPGGGGGVGTAPA 214
Query: 109 -------------------DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPD 149
+ +++GNL P + L F + G + +I D
Sbjct: 215 PINFQGGPLSYESVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSIGYL---SEIRMQAD 271
Query: 150 TGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
RGF F+ D+ E + AI + GQ + R I S+ K T G+
Sbjct: 272 ----RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG-KDRTDGQ 314
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 10/180 (5%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ Y G+LD TE L+ELF GPVV++ V +D +T GY +V F+ DA AI V
Sbjct: 21 SLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGADAARAIDV 80
Query: 86 LNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN + GKPIR+ + +D +KS VG N+FI NLD ++D K LYDTFS FG IV+
Sbjct: 81 LNFNVVNGKPIRIMYSQRDPALRKS-GVG-NIFIKNLDKEIDNKALYDTFSQFGNIVS-A 137
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D G S+G+GF+ + EA+ AI+ +NG L ++Q+ V +++ +GER G P
Sbjct: 138 KVAADG-QGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVG-PFQR--RGERGGGP 193
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 21/189 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L E+F G + +V + KD +G+GFV F E A A++ L+
Sbjct: 200 YVKNLHESVDEDKLKEVFGAVGKLTSVVIMKDG-EGKSKGFGFVCFEESEAASEAVEKLD 258
Query: 88 -MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLY 129
K+ K V +A + K D GANL+I NL+ VD+ L
Sbjct: 259 GYDKIEDKAWVVCRAQKKAEREAELKAKFDAERRERLEKMAGANLYIKNLEDTVDDAKLR 318
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ FG I T+ ++MRD +G SRG F+++ S + + A+ MNG+ + + V+ A
Sbjct: 319 ELFAEFGTI-TSCRVMRDA-SGASRGSAFVAFSSADEATRAVTEMNGKMAGTKPLYVALA 376
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 377 QRKEDRRMR 385
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD ++ + L++ F Q G +V+ V D + +GYGFV+F +E A AI +N
Sbjct: 111 FIKNLDKEIDNKALYDTFSQFGNIVSAKVAADG-QGVSKGYGFVQFAEQEAAQQAIDKVN 169
Query: 88 MIKLYGKPIRV---NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
+ L K + V + + N+++ NL VDE L + F A G + T+ I
Sbjct: 170 GMLLNDKQVYVGPFQRRGERGGGPTTFNNVYVKNLHESVDEDKLKEVFGAVGKL-TSVVI 228
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
M+D + G S+GFGF+ ++ EA+ A+E ++G
Sbjct: 229 MKDGE-GKSKGFGFVCFEESEAASEAVEKLDG 259
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 11 ANLLGQHSAERNQD------ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNL 64
A L + AER + A Y+ NL+ V + L ELF + G + + V +D +
Sbjct: 281 AELKAKFDAERRERLEKMAGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRD-ASGA 339
Query: 65 HQGYGFVEFRSEEDADYAIKVLN 87
+G FV F S ++A A+ +N
Sbjct: 340 SRGSAFVAFSSADEATRAVTEMN 362
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 112/180 (62%), Gaps = 3/180 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVG+L+ V EE L++LF Q VV+V V +D+ GYG+V F + +DA A+
Sbjct: 44 NLSLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAM 103
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
K LN L GKPIR+ + +D G N+FI NLD +D KLL++TF+AFG +++
Sbjct: 104 KALNFTPLNGKPIRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLS-C 162
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D + G S+G+GF+ +++ E+++ AI ++G L ++Q+ V + ++ + +G+P
Sbjct: 163 KVAVDSN-GQSKGYGFVQFENEESAERAISFLDGMCLNDKQVYVGFFVRQQERTRTNGSP 221
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + +LL E F G V++ V D +GYGFV+F +EE A+ AI L
Sbjct: 135 VFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDS-NGQSKGYGFVQFENEESAERAISFL 193
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA----NLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ + L K + V Q +++ G+ N+++ NL + + L F +G I T+
Sbjct: 194 DGMCLNDKQVYVGFFVRQQERTRTNGSPKFTNVYVKNLSETITNEDLEKVFGVYGTI-TS 252
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+M+D TG SRGFGF+++ +++ AA+E +NG + + Y + K ER
Sbjct: 253 ALVMKD-QTGKSRGFGFVNFQDPDSAAAAVEKLNGTTAHDDK--AWYVGRAQRKSEREAE 309
Query: 202 PAERILAANNPSSQKSRPHTLF 223
+ N ++ + L+
Sbjct: 310 LKAKFEQERNSRYERLKAANLY 331
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL +T E L ++F G + + V KD+ T +G+GFV F+ + A A++ L
Sbjct: 226 VYVKNLSETITNEDLEKVFGVYGTITSALVMKDQ-TGKSRGFGFVNFQDPDSAAAAVEKL 284
Query: 87 NMIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLL 128
N + R + S+ + L ANL++ NLD ++++ L
Sbjct: 285 NGTTAHDDKAWYVGRAQRKSEREAELKAKFEQERNSRYERLKAANLYLKNLDDNINDVKL 344
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG I T+ K+M D G S+G GF+++ + E + A++ MNG+ + + + V+
Sbjct: 345 KELFSEFGSI-TSCKVMLDHQ-GVSKGSGFVAFSTPEEASRALKEMNGKMIGRKPLYVAI 402
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 403 AQRKEERKAR 412
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
ER + A Y+ NLD + + L ELF + G + + V D + +G GFV F + E+A
Sbjct: 323 ERLKAANLYLKNLDDNINDVKLKELFSEFGSITSCKVMLDH-QGVSKGSGFVAFSTPEEA 381
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+K +N + KP+ V A + ++
Sbjct: 382 SRALKEMNGKMIGRKPLYVAIAQRKEE 408
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AG ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 129 KVAC---DKHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH-FK--SRRERAAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D+ + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDKHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ +++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD ++G SR FGF++++ E + A+ MNG+ + R + S A K+
Sbjct: 220 -VKVMRD-NSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKR 269
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDN-SGRSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + ++A QD+ S G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYASRAQKRVERQNELKRKFEQMKQDRLSRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + +S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|12836631|dbj|BAB23742.1| unnamed protein product [Mus musculus]
Length = 168
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 105/163 (64%), Gaps = 8/163 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKP+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
+ D S+G+GF+ +++ EA++ AIE MNG L +R++
Sbjct: 129 KVV---CDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168
>gi|38541222|gb|AAH62832.1| Pabpc1a protein, partial [Danio rerio]
Length = 327
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P+R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGRPVRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 129 KVV---CDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 14/179 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N D+D++ L + F +G ++
Sbjct: 160 GMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++M D D+G S+GFGF+S++ E + A++ MNG+ + +Q+ V A K KGER
Sbjct: 220 -IRVMTD-DSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQK---KGERQ 273
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Y+ N + +E L E+F + GP +++ V D + +G+GFV F EDA A+
Sbjct: 191 TNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQRAVD 249
Query: 85 VLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKL 127
+N ++ GK + V +A QD+ + G NL++ NLD +D++
Sbjct: 250 EMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDER 309
Query: 128 LYDTFSAFGVIVTNPKIM 145
L FS FG I T+ K+M
Sbjct: 310 LRKEFSPFGTI-TSAKVM 326
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L++ F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 71 TMNFDLIRGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDRSIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D + G S+G+GF+ +++ EA++ +IE +NG L +++ V
Sbjct: 128 CKVAQD-ENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 171
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + +++ F G +++ V +D +GYGFV F +EE A+ +I+ +
Sbjct: 101 VFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDE-NGTSKGYGFVHFETEEAANKSIEKV 159
Query: 87 NMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYDTFSAFGVIV 139
N + L GK + V + + +K L A LF + N D+ E+ L + F FG I
Sbjct: 160 NGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDLSEEQLRNMFEKFGKI- 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
T+ K+M D G S+GFGF++++S EA++ A++A+NG+ L
Sbjct: 219 TSYKVM-SKDDGKSKGFGFVAFESPEAAETAVDALNGKELV 258
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 26/193 (13%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N ++EE L +F + G + + Y + +G+GFV F S E A+ A+ L
Sbjct: 194 VYVKNFGEDLSEEQLRNMFEKFGKITS-YKVMSKDDGKSKGFGFVAFESPEAAETAVDAL 252
Query: 87 NMIKLY-GKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLL 128
N +L GKP+ V +A + K+ + G NL++ NLD +D++ L
Sbjct: 253 NGKELVEGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 129 YDTFSAFGVIVTNPKIMRDPD------TGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
F+ FG I T+ K+M + + T S+GFGF+ + S E + A+ MNG+ + ++
Sbjct: 313 RKEFAPFGTI-TSAKVMIEENKTESFITTRSKGFGFVCFSSPEEATKAVTEMNGRIVGSK 371
Query: 183 QITVSYAYKKDTK 195
+ V+ A +K+ +
Sbjct: 372 PLYVALAQRKEDR 384
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ V++ L+ELF QAG VV+V V +D + GY +V F + DA A++
Sbjct: 46 TSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALE 105
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN L KPIRV +++D S G AN+FI NLD +D K L++TFS+FG I++ K
Sbjct: 106 VLNFAVLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILS-CK 164
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + G S+GFGF+ Y+ EA+ AI+++NG + ++ + V
Sbjct: 165 VAMD-EAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFV 206
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ R+ A ++ NLD + + L E F G +++ V D +G+GFV++ EE
Sbjct: 127 SSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSCKVAMDEAGQ-SKGFGFVQYEKEE 185
Query: 78 DADYAIKVLNMIKLYGKPIRVN---KASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTF 132
A AIK LN + + KP+ V + + S D N+F+ NL ++ L F
Sbjct: 186 AAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKVF 245
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +M D G SR FGFI++++ +A+ A++ +NG+ + +++ V A KK
Sbjct: 246 GEYGSI-TSAVVMIGMD-GKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKK 303
Query: 193 DTK 195
+
Sbjct: 304 SER 306
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
HS ++ + +V NL T+E L ++F + G + + V + + +GF+ F +
Sbjct: 217 HSFDKTKFNNVFVKNLSESTTKEDLLKVFGEYGSITSAVVMIG-MDGKSRCFGFINFENP 275
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGNL 119
+ A A++ LN K+ K V +A + ++ +++ G NL++ NL
Sbjct: 276 DAASRAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNL 335
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D + + L + FS FG I T+ K+MRD + G S+G GF+++ + E + A+ MNG+ +
Sbjct: 336 DDSIGDDQLRELFSNFGKI-TSYKVMRDQN-GLSKGSGFVAFSTREEASQALTEMNGKMI 393
Query: 180 CNRQITVSYAYKKDTK 195
+ + V++A +K+ +
Sbjct: 394 SGKPLYVAFAQRKEDR 409
>gi|340719920|ref|XP_003398392.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
terrestris]
Length = 609
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 109/163 (66%), Gaps = 7/163 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L +++
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKL 169
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 19/172 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + +++ F G +++ V +D + + +GYGFV F +EE A+ +I +N
Sbjct: 102 FIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDE-SGVSKGYGFVHFETEEAANKSIDRVN 160
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
+ L GK + N+++ N D+ + L + F +G I ++ +++D
Sbjct: 161 GMLLNGKKLFT--------------NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKD 206
Query: 148 PDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
G SRGFGF++++ +A++ A+ +NG+ + + Y + K ER
Sbjct: 207 D--GKSRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCM--YVGRAQKKAERQ 254
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N +T++ L E+F + G + + V + D +G+GFV F + A+ A+
Sbjct: 174 YVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDD---GKSRGFGFVAFEDPDAAEQAVLE 230
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 231 LNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDER 290
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+
Sbjct: 291 LRKEFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVA 347
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 348 LAQRKEDR 355
>gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans]
Length = 705
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + A
Sbjct: 40 HSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERA 99
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++
Sbjct: 100 LDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS- 158
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ +D + G S+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 159 CKVAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 211
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + +GYGFV + + E A+ AIK +N
Sbjct: 133 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEF-GVSKGYGFVHYETAEAANNAIKHVN 191
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+DP+V+++ F FG I T
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEI-T 250
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E
Sbjct: 251 SATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREE 306
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 69/235 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+DP+V +E +LF + G + + + +D +G+GFV F + E A A++ +N
Sbjct: 226 YIKNIDPEVEDEEFRKLFEKFGEITSATLSRDS-EGKSRGFGFVNFSTHESAQAAVEEMN 284
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL DVD+ L +
Sbjct: 285 DKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLRE 344
Query: 131 TFSAFGVIVTNPKIMRD--------PDT-------------------------------- 150
F +G I T+ K+MRD P++
Sbjct: 345 LFGPYGTI-TSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEKEEEKE 403
Query: 151 ----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + S + + A+ MN + + + + V+ A +KD +
Sbjct: 404 AEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 458
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 116/185 (62%), Gaps = 9/185 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFR 74
+AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 9 AAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYM 66
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDT 131
A+ A++ LN K++ IRVN A Q +++ + +N +F+G+L P+V++ +L
Sbjct: 67 DMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDDVLAKA 126
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
F+AFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +
Sbjct: 127 FAAFGTM-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Query: 192 KDTKG 196
K G
Sbjct: 186 KTQGG 190
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 48/226 (21%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + + +VG+L P+V +++L + F G + + V D + +GYGF+ FR
Sbjct: 98 QNKEDTSNHFHVFVGDLSPEVNDDVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRD 157
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKS------------LDVGA----------- 112
+ DA+ AI +N L + IRVN A+Q + GA
Sbjct: 158 KTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQG 217
Query: 113 -----------------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG 155
+++GNL P + L F + G + +I D RG
Sbjct: 218 GPLSYESVVQQTPAFNTTVYVGNLVPYCTQSDLIPLFQSIGYL---SEIRMQAD----RG 270
Query: 156 FGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
F F+ D+ E + AI + GQ + R I S+ K G GT
Sbjct: 271 FAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCSWG-KDRADGGAAGT 315
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 109/182 (59%), Gaps = 8/182 (4%)
Query: 18 SAERNQD----ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+AE Q+ A+ YVG LDP VTE L+E+F G V + V +D V+ GY +V F
Sbjct: 36 TAESTQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNF 95
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTF 132
+S D + A++ LN + GK R+ + +D G+ N+FI NL P +D K L+DTF
Sbjct: 96 QSHADGEKALEELNYTPIKGKACRIMWSQRDPSLRRNGSGNIFIKNLHPAIDNKTLHDTF 155
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYK 191
SAFG I++ KI D + GNS+GFGF+ Y+ E++ AAIE +NG L + ++ V + K
Sbjct: 156 SAFGKILS-CKIATD-ENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGPHLAK 213
Query: 192 KD 193
KD
Sbjct: 214 KD 215
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N++ E+ L E F G + ++++ KD + +G+GFV F EDA A++
Sbjct: 229 NVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDE-SGKSRGFGFVNFEKHEDAVKAVEE 287
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLL 128
LN + G+ + V +A + + ++ G NLF+ NLD +D+ L
Sbjct: 288 LNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVKNLDDSIDDAKL 347
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F +G I T+ K+M D D G S+GFGF+ Y S E + AI M+ + + + + V+
Sbjct: 348 EEEFKPYGTI-TSAKVMLD-DAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYVAL 405
Query: 189 AYKKDTKGERHGTPAERILAANNPSSQKS 217
A +K+ R +++I A N Q++
Sbjct: 406 AQRKEV---RRSQLSQQIQARNQMRMQQA 431
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S RN ++ NL P + + L + F G +++ + D N +G+GFV + E
Sbjct: 128 SLRRNGSGNIFIKNLHPAIDNKTLHDTFSAFGKILSCKIATDENGN-SKGFGFVHYEESE 186
Query: 78 DADYAIKVLNMIKLYGKPIRV--NKASQDKKS-----LDVGANLFIGNLDPDVDEKLLYD 130
A AI+ +N + L + V + A +D++S + N+++ N++ + DE L +
Sbjct: 187 SAKAAIENVNGMLLNDHEVYVGPHLAKKDRQSKMRELIANFTNVYVKNINLNWDEDKLRE 246
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
TFS FG I + + ++G SRGFGF++++ E + A+E +N + + +++ V A
Sbjct: 247 TFSPFGTI--SSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRAQ 304
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLF 223
K K ER + + AA K + + LF
Sbjct: 305 K---KSERMESLKHQYEAARQEQLNKYQGYNLF 334
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 19/247 (7%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPV-VNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVGN+ QVTE LL E+F GPV + + KD+ + YGFV + A AI
Sbjct: 62 SVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSS-----YGFVHYFDRRSAALAIL 116
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN L+G+PI+VN A + D + N+F+G+L P+V + LY +FS F ++
Sbjct: 117 SLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSS-CSDA 175
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
++M D TG SRGFGF+S+ + + + AI MNG++L +RQI ++A K T G+ +
Sbjct: 176 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSS 235
Query: 203 AERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP-------RPYANGAAS 255
+ + S + TL P +N Q G + P Y + +
Sbjct: 236 DGKSVVELTTGSSEDGKETLNEEAP---ENNSQFTTVYVGNLAPEVTQLDLHRYFHALGA 292
Query: 256 GPISAVR 262
G I VR
Sbjct: 293 GVIEEVR 299
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 42/200 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ L++ F + V D+ T +G+GFV FR+++DA AI +N
Sbjct: 149 FVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 208
Query: 88 MIKLYGKPIRVN-----------KASQDKKS---LDVGAN-------------------- 113
L + IR N K S D KS L G++
Sbjct: 209 GKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPENNSQFTT 268
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GNL P+V + L+ F A G ++ ++ RD +GFGF+ Y++ + AI+
Sbjct: 269 VYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRD------KGFGFVRYNTHPEAALAIQ 322
Query: 173 AMNGQ-YLCNRQITVSYAYK 191
N Q YL NRQI S+ K
Sbjct: 323 MGNTQPYLFNRQIKCSWGNK 342
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 10 GANLLGQHSAERN-QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQ 66
G L + + E N Q T YVGNL P+VT+ L F + AG + V V +D+
Sbjct: 251 GKETLNEEAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDK------ 304
Query: 67 GYGFVEFRSEEDADYAIKVLNMI-KLYGKPIRVN 99
G+GFV + + +A AI++ N L+ + I+ +
Sbjct: 305 GFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCS 338
>gi|328773103|gb|EGF83140.1| hypothetical protein BATDEDRAFT_34010 [Batrachochytrium
dendrobatidis JAM81]
Length = 718
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L+P VTE +L+E+F GPV ++ V +D VT GYG++ + DA+ A+
Sbjct: 65 ASLYIGDLEPSVTEAMLFEVFNMVGPVASIRVCRDAVTRRSLGYGYINYLDIADAERALD 124
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G P+R+ +++D G N+FI NL +D K L+DTFSAFG I++
Sbjct: 125 TLNYTTVRGNPVRIMWSNRDPALRRAGTGNIFIKNLHTTIDHKALHDTFSAFGKILSCKI 184
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
M D S G GF+ Y++ E ++ AI+ +NG L ++Q+ V +K ER T
Sbjct: 185 AM---DGERSLGHGFVHYETMEMAENAIKHVNGMLLNDQQVYVGLHI---SKKERSSTIE 238
Query: 204 ER 205
E+
Sbjct: 239 EK 240
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 19/193 (9%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
+R++ YV N+D V ++ E+F G V+ + D N + +GFV + + EDA
Sbjct: 240 KRSKFTNIYVKNIDASVDQKAFEEMFHPFGTTVSCVLMVDEEGNSKE-FGFVNYENHEDA 298
Query: 80 DYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPD 122
A++ ++ ++ GK I V +A ++K S G NLF+ N+D
Sbjct: 299 RRAVEEMHEKEIGGKQIYVGRAQKKFEREEELRRQYEKIREEKLSKYQGVNLFVKNIDES 358
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
+D++ L FS FG I T+ KIM D TG S+GFGF+ + + + + A+ MN + L N+
Sbjct: 359 IDDEKLRQEFSVFGAI-TSTKIMVDEKTGISKGFGFVCFSNPDEATKAVTEMNNRMLANK 417
Query: 183 QITVSYAYKKDTK 195
I V+ A +K+ +
Sbjct: 418 PIYVALAQRKEVR 430
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 145/361 (40%), Gaps = 45/361 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL + + L + F G +++ + D +L G+GFV + + E A+ AIK +N
Sbjct: 156 FIKNLHTTIDHKALHDTFSAFGKILSCKIAMDGERSL--GHGFVHYETMEMAENAIKHVN 213
Query: 88 MIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V ++S ++ N+++ N+D VD+K + F FG V+
Sbjct: 214 GMLLNDQQVYVGLHISKKERSSTIEEKRSKFTNIYVKNIDASVDQKAFEEMFHPFGTTVS 273
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
++ + GNS+ FGF++Y++ E + A+E M+ + + +QI V A KK + E
Sbjct: 274 C--VLMVDEEGNSKEFGFVNYENHEDARRAVEEMHEKEIGGKQIYVGRAQKKFEREEELR 331
Query: 201 TPAERILAANNPSSQKSRPHTLFASG------PPSLQNAPQANGTVGGPVPPRPYANGAA 254
E+I K + LF L+ G + G +
Sbjct: 332 RQYEKI---REEKLSKYQGVNLFVKNIDESIDDEKLRQEFSVFGAITSTKIMVDEKTGIS 388
Query: 255 SGPISAVRPPPPPPQAA---------AFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQ 305
G P A A P+ VA + + Q + + Q M Q
Sbjct: 389 KGFGFVCFSNPDEATKAVTEMNNRMLANKPIYVALAQRKEVRRQQLAAQMQQRAMRAHQQ 448
Query: 306 -----------FRPPPNMPPPPP----PQLASAMQRPPPQPMGMGAQPPVWRQPPPPPQQ 350
F PP +PP PQ A P+ G G QPP +QP PPQQ
Sbjct: 449 MMPPGYPGASIFYPPGGVPPQARGYFNPQQAQQQMMARPRWTGPG-QPPHMQQPGFPPQQ 507
Query: 351 L 351
+
Sbjct: 508 M 508
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V +
Sbjct: 129 KVVC---DEHGSRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGH 172
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQNAISTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ +++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRDV-SGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 21/179 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D V+ +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-VSGHSRGFGFVNFEKHEEAQKAVVNMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F +AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K LYDT SAFG +++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKSRKEREAE 182
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G V++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNVLSCKVVCDE--NGSKGYGFVHFETREAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
I L + + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GIPLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D +G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-QSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D+ + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ-SGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKCKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|67527154|ref|XP_661604.1| hypothetical protein AN4000.2 [Aspergillus nidulans FGSC A4]
gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 711
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + A
Sbjct: 40 HSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERA 99
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++
Sbjct: 100 LDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS- 158
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ +D + G S+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 159 CKVAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 211
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + +GYGFV + + E A+ AIK +N
Sbjct: 133 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEF-GVSKGYGFVHYETAEAANNAIKHVN 191
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+DP+V+++ F FG I T
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEI-T 250
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E
Sbjct: 251 SATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREE 306
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 69/235 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+DP+V +E +LF + G + + + +D +G+GFV F + E A A++ +N
Sbjct: 226 YIKNIDPEVEDEEFRKLFEKFGEITSATLSRDS-EGKSRGFGFVNFSTHESAQAAVEEMN 284
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL DVD+ L +
Sbjct: 285 DKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLRE 344
Query: 131 TFSAFGVIVTNPKIMRD--------PDT-------------------------------- 150
F +G I T+ K+MRD P++
Sbjct: 345 LFGPYGTI-TSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEKEEKKE 403
Query: 151 ----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + S + + A+ MN + + + + V+ A +KD +
Sbjct: 404 AEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 458
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + DA+ A+
Sbjct: 56 NTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAERAL 115
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN + K R+ + +D G N+FI NLD +D K L+DTF+AFG I++
Sbjct: 116 EQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILS-C 174
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D TG S+G+GF+ Y + E+++AAI+ +NG L ++ + V
Sbjct: 175 KVAMD-STGASKGYGFVHYVTAESAEAAIKGVNGMQLNDKVVFV 217
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 143/304 (47%), Gaps = 63/304 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL- 86
Y+ NL +VT E L E+F + GPV + V D + H+G+GFV + + E A A++ L
Sbjct: 241 YIKNLPTEVTTEELNEMFSKYGPVTSAAVQADE-SGKHRGFGFVNYENHESASKAVEALH 299
Query: 87 ------NMIKLYGKPIRVNKASQDKKSLDV----------GANLFIGNLDPDVDEKLLYD 130
N++ + RV + ++ +++ + G NL+I NLD + D++ L
Sbjct: 300 DKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGVNLYIKNLDDEYDDEKLQA 359
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ K+M+D D G SRGFGF+ + + + + A+ MNG+ L ++ + VS A
Sbjct: 360 EFLPFGTI-TSCKVMKD-DKGVSRGFGFVCFSAPDEATKAVAEMNGKMLGSKPLYVSLAQ 417
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
+KD + ++ L A + R + A+G P G G P + Y
Sbjct: 418 RKDVRKQQ--------LEAQMSQRAQMRSQQIAAAGIP---------GAPYGAPPNQMYY 460
Query: 251 NGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPPP 310
GAA+ PPP + A+PP G+P MPP ++ PP
Sbjct: 461 GGAAA--------YPPPGRGMAYPP-----------------NGMPAG-MPPRPRYAPPG 494
Query: 311 NMPP 314
MPP
Sbjct: 495 QMPP 498
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G LDP V E +LY+ FS G V++ ++ RD T S G+ +++Y + ++ A+E
Sbjct: 58 SLYVGELDPTVTEAMLYEIFSMIGP-VSSIRVCRDAVTRRSLGYAYVNYLNAADAERALE 116
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + N+ + ++ +
Sbjct: 117 QLNYSLIKNKACRIMWSQR 135
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 100/163 (61%), Gaps = 4/163 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ ++
Sbjct: 316 ASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLADAERVLE 375
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N+ + GKP+R+ + +D G N+FI NL+ +D K LY TFSAFG I++
Sbjct: 376 TMNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLEKSIDNKALYKTFSAFGNILSCKV 435
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
I D S+G+GF+ +++ +A+D AIE MNG L N ++ V
Sbjct: 436 I---SDENGSKGYGFVHFENQQAADKAIEKMNGVRLNNLKVYV 475
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D N +GYGFV F +++ AD AI+ +N
Sbjct: 407 FIKNLEKSIDNKALYKTFSAFGNILSCKVISDE--NGSKGYGFVHFENQQAADKAIEKMN 464
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
++L + V + S+ ++ L++GA N++I N D+D L + F FG ++
Sbjct: 465 GVRLNNLKVYVGRFKSRKERELELGARAREFTNVYIKNFGEDMDNDRLTEVFGKFGHALS 524
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK---DTKGE 197
K+M D ++G S+GFGF+SY+ E + A++ MNG+ ++I V A KK T+ +
Sbjct: 525 -VKVMTD-ESGKSKGFGFVSYEKHEDAQRAVDEMNGKEFNGKRIYVGRAQKKGERQTELK 582
Query: 198 RH 199
RH
Sbjct: 583 RH 584
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 21/191 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A + Y+ N + + L E+F + G ++V V D + +G+GFV + ED
Sbjct: 490 ARAREFTNVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDE-SGKSKGFGFVSYEKHED 548
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A A+ +N + GK I V +A Q++ S G NL++ NLD
Sbjct: 549 AQRAVDEMNGKEFNGKRIYVGRAQKKGERQTELKRHFEQVKQERSSRYQGVNLYVKNLDD 608
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G+SRGFGF+ + + E + A+ MNG+ +
Sbjct: 609 SIDDERLRKAFSPFGTI-TSAKVMME--GGHSRGFGFVCFSAPEEAAKAVSEMNGKLVAT 665
Query: 182 RQITVSYAYKK 192
+ + V+ A +K
Sbjct: 666 KPLYVALAQRK 676
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 114/181 (62%), Gaps = 9/181 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFR 74
+AE + A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+
Sbjct: 9 AAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYM 66
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDT 131
A+ A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++++L
Sbjct: 67 DMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKA 126
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FSAFG + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +
Sbjct: 127 FSAFGTL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ 185
Query: 192 K 192
K
Sbjct: 186 K 186
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 47/220 (21%)
Query: 17 HSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ ++N++ T+ +VG+L P+V +E+L + F G + + V D + +GYGF+
Sbjct: 94 YQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFL 153
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK----------SLDVGA--------- 112
FR + DA+ AI +N L + IRVN A+Q + S GA
Sbjct: 154 AFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPGGGARPSAGGGAPAPVNFQGG 213
Query: 113 ----------------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF 156
+++GNL P + L F + G + +I D RGF
Sbjct: 214 PLTYEQVLAQTAPYNTTVYVGNLVPYTTQADLIPLFQSIGYL---SEIRMQAD----RGF 266
Query: 157 GFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
F+ D+ E + AI + GQ + R I S+ + G
Sbjct: 267 AFVKLDTHEHAAQAIVQLQGQMVHGRPIKCSWGKDRADGG 306
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 108/189 (57%), Gaps = 5/189 (2%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
H D YVGNLD +TE++L + F AG +V+V V D+ +N + Y FVE+
Sbjct: 71 HGGRETSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSN-YVNYAFVEYAKA 129
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQDKKSL--DVGANLFIGNLDPDVDEKLLYDTFSA 134
DA A++ LN I++ +++N+A Q ++S D NLF+G+L+ D+D+ L +F
Sbjct: 130 HDASVALQTLNGIQIENNKVKINRAFQSQQSTTDDSTFNLFVGDLNIDIDDDTLSRSFKD 189
Query: 135 FGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD- 193
F + +M D TG SRG+GF+S+ E + A+E M G+ L R I +++A K+D
Sbjct: 190 FPSYI-QAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRINWATKRDN 248
Query: 194 TKGERHGTP 202
+ + HG P
Sbjct: 249 NQQQNHGGP 257
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q S + +VG+L+ + ++ L F + +V D T +GYGFV F
Sbjct: 158 QQSTTDDSTFNLFVGDLNIDIDDDTLSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFAD 217
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+E A A++ + +L G+PIR+N A++
Sbjct: 218 QEQAQKAMEEMQGKELNGRPIRINWATK 245
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 3/178 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L+++F Q G VV+V V +D T + GY +V F S DA A+++
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEM 102
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ +++D S G AN+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILS-CKV 161
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
+ +G S+G+GF+ Y+ E++ AI +NG L ++++ V +K + G+P
Sbjct: 162 ATEI-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSP 218
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 105/191 (54%), Gaps = 21/191 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TE+ L E+F + GP+ +V V + + +GFV F + +DA A++
Sbjct: 222 NVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRAD-DGKSRCFGFVNFENPDDAARAVED 280
Query: 86 LNMIKLYGKPIRVNKASQ---------------DKKSLDV--GANLFIGNLDPDVDE-KL 127
LN KL K + V +A + +K++ D G NL++ NLD VD+ +
Sbjct: 281 LNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDEK 340
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ FG I T+ K+MRD + G ++G GF+++ S E + A+ AMNG+ + ++ + V+
Sbjct: 341 LKELFAEFGTI-TSCKVMRDSN-GVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVA 398
Query: 188 YAYKKDTKGER 198
A +K+ + R
Sbjct: 399 LAQRKEERRAR 409
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 11/211 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ A ++ NLD + + L++ F G +++ V + ++ +GYGFV++ +E
Sbjct: 123 SSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKVATE-ISGESKGYGFVQYEQDE 181
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTF 132
A AI LN + L K + V + ++ +V N+++ NL E L + F
Sbjct: 182 SAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTEDNLKEMF 241
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ ++R D G SR FGF+++++ + + A+E +NG+ L ++++ V A K
Sbjct: 242 GKFGPI-TSVIVVR-ADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELYVGRAQK- 298
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
K ER E+ +N ++ K++ L+
Sbjct: 299 --KSEREMQLKEKFEKSNKETADKNQGTNLY 327
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 16 QHSAERNQDATAYVGNLDPQV-TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+ +A++NQ Y+ NLD V +E L ELF + G + + V +D +++G GFV F+
Sbjct: 315 KETADKNQGTNLYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDS-NGVNKGSGFVAFK 373
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
S EDA A+ +N + KP+ V A + ++
Sbjct: 374 SSEDASRALVAMNGKMVGSKPLYVALAQRKEE 405
>gi|296424904|ref|XP_002841985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638239|emb|CAZ86176.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 6/185 (3%)
Query: 17 HSAERNQDATA--YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
HSA N +A YVG L+P VTE +L+ELF G V ++ V +D VT GY +V +
Sbjct: 43 HSAPHNSHTSASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYN 102
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFS 133
+ D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+
Sbjct: 103 NTADGERALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFA 162
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KK 192
AFG I++ K+ +D + NSRG+GF+ Y++ EA++ AI+ +NG L +++ V + KK
Sbjct: 163 AFGNILS-CKVAQD-EFSNSRGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKK 220
Query: 193 DTKGE 197
D + +
Sbjct: 221 DRQSK 225
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D +N +GYGFV + + E A+ AIK +N
Sbjct: 144 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFSN-SRGYGFVHYETAEAANNAIKHVN 202
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V K + K ++ AN +++ N+DP+V ++ F +G I T
Sbjct: 203 GMLLNEKKVFVGHHIPKKDRQSKFDEMKANFTNVYVKNIDPEVTDEEFRTMFENYGPI-T 261
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
+ + RD D G SRGFGF+++ + + A+E ++ L
Sbjct: 262 SASLSRDQD-GVSRGFGFVNFQEHQHAAKAVEELHESEL 299
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+DP+VT+E +F GP+ + + +D+ + +G+GFV F+ + A A++ L+
Sbjct: 237 YVKNIDPEVTDEEFRTMFENYGPITSASLSRDQ-DGVSRGFGFVNFQEHQHAAKAVEELH 295
Query: 88 MIKLYGK---PIRVNKASQDKKSL 108
+L G+ P+ + K + + S+
Sbjct: 296 ESELKGQTLYPLELRKLASTRVSI 319
>gi|294891158|ref|XP_002773449.1| spliceosome associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239878602|gb|EER05265.1| spliceosome associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 216
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
IV KIMR +TG S+GFGF+SYD FEASDAA+ MNGQYLCNRQI+VSY+YKKD+KGE
Sbjct: 6 IVVFCKIMR-SETGESKGFGFVSYDGFEASDAAMAGMNGQYLCNRQISVSYSYKKDSKGE 64
Query: 198 RHGTPAERILAANNPSSQ 215
RHGT AER++AAN SSQ
Sbjct: 65 RHGTAAERMIAANRESSQ 82
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L++ F + VV+V V +D TN GYG+V + + EDA+ A++
Sbjct: 41 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQ 100
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L GK IR+ +S+D + G NLF+ NLD VD K L++TFS G IV+ K
Sbjct: 101 KLNYSTLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETFSGCGTIVS-CK 159
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D G SRG+GF+ +D+ +++ AIE +NG+ L ++QI V +K+ +
Sbjct: 160 VAAD-HMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEER 210
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 116/264 (43%), Gaps = 26/264 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD V + L E F G +V+ V D + +GYGFV+F +E+ A AI+ LN
Sbjct: 132 FVKNLDKSVDNKTLHETFSGCGTIVSCKVAADHMGQ-SRGYGFVQFDTEDSAKNAIEKLN 190
Query: 88 MIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
L K I V +++ DK N+++ NL + L TF +G I
Sbjct: 191 GKVLNDKQIFVGPFLRKEERESAADKMKF---TNVYVKNLSEVTTDDELKTTFGQYGSI- 246
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++ +MRD D G SR FGF+++++ E + A+EA+NG+ +++ V A KK ER
Sbjct: 247 SSAVVMRDGD-GKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKS---ERE 302
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPIS 259
+ R ++ + K L+ + TV +A
Sbjct: 303 LELSRRYEQGSSDAGNKFDGLNLY---------VKNLDDTVTDEKLRELFAEFGTITSCK 353
Query: 260 AVRPPPPPPQAAAFPPMQVAGQAA 283
+R P + + F A +A+
Sbjct: 354 VMRDPSGTSKGSGFVAFSAASEAS 377
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 20/197 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ + YV NL T++ L F Q G + + V +D + +GFV F +
Sbjct: 211 ESAADKMKFTNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDG-DGKSRCFGFVNFEN 269
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGN 118
EDA A++ LN K K V KA + ++ L++ G NL++ N
Sbjct: 270 PEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGNKFDGLNLYVKN 329
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD V ++ L + F+ FG I T+ K+MRDP +G S+G GF+++ + + + MNG+
Sbjct: 330 LDDTVTDEKLRELFAEFGTI-TSCKVMRDP-SGTSKGSGFVAFSAASEASRVLNEMNGKM 387
Query: 179 LCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 388 VGGKPLYVALAQRKEER 404
>gi|383862671|ref|XP_003706807.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3
[Megachile rotundata]
Length = 601
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 106/158 (67%), Gaps = 7/158 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDKVNGMLL 164
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 27/172 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + +++ F G +++ V +D + + +GYGFV F +EE A+ +I +N
Sbjct: 102 FIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDE-SGVSKGYGFVHFETEEAANKSIDKVN 160
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
+ L GK N D+ + L + F +G I ++ +++D
Sbjct: 161 GMLLNGKK----------------------NFGEDMTDDKLKEMFEKYGTITSHKVMIKD 198
Query: 148 PDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
G SRGFGF++++ +A++ A+ +NG+ + + Y + K ER
Sbjct: 199 D--GKSRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCM--YVGRAQKKAERQ 246
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 26/185 (14%)
Query: 31 NLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNM 88
N +T++ L E+F + G + + V + D + +G+GFV F + A+ A+ LN
Sbjct: 169 NFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKS---RGFGFVAFEDPDAAEQAVLELNG 225
Query: 89 IKL-YGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ GK + V +A + ++ S G NL++ NLD ++++ L
Sbjct: 226 KEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDERLRR 285
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I + +M D G S+GFGF+ + + E + A+ MNG+ + + + V+ A
Sbjct: 286 EFAPFGTITSAKVMMED---GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQ 342
Query: 191 KKDTK 195
+K+ +
Sbjct: 343 RKEDR 347
>gi|321466794|gb|EFX77787.1| polyadenylate binding protein, cytoplasmic 1 [Daphnia pulex]
Length = 574
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +VTE +L+E F AGPVV++ V +D +T GY +V F+ DA+ A+
Sbjct: 12 ASLYVGDLHNEVTEAMLFEKFSTAGPVVSIRVCRDMITRRSLGYAYVNFQQPADAERALD 71
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N L G+PIR+ + +D + VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 72 SMNFDVLRGRPIRIMWSQRDPSLRRSGVG-NIFIKNLDKTIDNKAMYDTFSAFGNILS-C 129
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D + GNS+G+GF+ +++ E++ AI +NG L +++ V
Sbjct: 130 KVAQD-EAGNSKGYGFVHFETEESAVNAITKVNGMLLNGKKVFV 172
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V +D N +GYGFV F +EE
Sbjct: 93 SLRRSGVGNIFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDEAGN-SKGYGFVHFETEE 151
Query: 78 DADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A AI +N + L GK + V + + + ++G N++I N + D++ L++
Sbjct: 152 SAVNAITKVNGMLLNGKKVFVGRFIPRKDRERELGEKAKYFTNVYIKNFGDEFDDEKLFE 211
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +G VT+ K+M D G SRGFGF+ Y+ +A++ A + M+ + + + + V A
Sbjct: 212 CFSKYGK-VTSHKVM-SSDDGKSRGFGFVCYEDPDAAERACDDMHAKDMNGKTLFVGRAQ 269
Query: 191 KKDTK 195
K++ +
Sbjct: 270 KRNER 274
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L+E F + G V + V +G+GFV + + A+ A +
Sbjct: 195 VYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSD-DGKSRGFGFVCYEDPDAAERACDDM 253
Query: 87 NMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLLY 129
+ + GK + V +A ++++ ++ G NL++ NLD +D++ L
Sbjct: 254 HAKDMNGKTLFVGRAQKRNERQTELRRKFEQMKIERLNRYQGVNLYVKNLDDTIDDERLR 313
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ +G I T+ K+M + N GFGF+ + S E + A+ MNG+ L ++ + V+ A
Sbjct: 314 KEFAPYGTI-TSAKVMTEGGR-NKGGFGFVCFSSPEEATKAVTEMNGRILVSKPLYVALA 371
Query: 190 YKKDTK 195
+K+ +
Sbjct: 372 QRKEDR 377
>gi|397575959|gb|EJK49989.1| hypothetical protein THAOC_31088, partial [Thalassiosira oceanica]
Length = 690
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+V E LL+E+F GPV ++ V +D VT GY +V + DA+ A+
Sbjct: 13 ASLYVGDLLPEVNEGLLYEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQAADAERALD 72
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP R+ + +D G N+F+ NL +D K LYDTFS FG I++ K
Sbjct: 73 SMNFTDIKGKPCRIMWSQRDPSVRRSGVGNIFVKNLHEGIDNKQLYDTFSLFGNILS-CK 131
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
++ D +TG S+G+G++ Y++ EA+ +AI+ ++G + +++ V ++DT+
Sbjct: 132 VVCDRETGLSKGYGYVHYETNEAAASAIDKLDGMLIDGKEVQVGVFMRRDTR 183
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G NL++ NLD V + +L D F G I T+ KIMRD T NSRGFGF+ + + E + A
Sbjct: 351 GVNLYVKNLDDAVTDDMLRDEFGGMGTI-TSAKIMRDAKTNNSRGFGFVCFSTPEDATRA 409
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTK 195
+ M+G+ + + I VS A +++ +
Sbjct: 410 VNEMSGKIVAGKPIYVSLAQRREVR 434
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NL + + L++ F G +++ V DR T L +GYG+V + + E
Sbjct: 94 SVRRSGVGNIFVKNLHEGIDNKQLYDTFSLFGNILSCKVVCDRETGLSKGYGYVHYETNE 153
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKK-SLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
A AI L+ + + GK ++V +D + +V NLFI N+ + D+K L F+ F
Sbjct: 154 AAASAIDKLDGMLIDGKEVQVGVFMRRDTRPDQEVYTNLFIKNMPYEWDDKRLEAEFAEF 213
Query: 136 GVIVT 140
G IV+
Sbjct: 214 GEIVS 218
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 11 ANLLGQHSAERN------QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNL 64
A L ++ AE+ Q YV NLD VT+++L + F G + + + +D TN
Sbjct: 332 AELRSKYEAEKMERIAKFQGVNLYVKNLDDAVTDDMLRDEFGGMGTITSAKIMRDAKTNN 391
Query: 65 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+G+GFV F + EDA A+ ++ + GKPI V+ A +
Sbjct: 392 SRGFGFVCFSTPEDATRAVNEMSGKIVAGKPIYVSLAQR 430
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 19/247 (7%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPV-VNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVGN+ QVTE LL E+F GPV + + KD+ + YGFV + A AI
Sbjct: 60 SVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSS-----YGFVHYFDRRSAALAIL 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN L+G+PI+VN A + D + N+F+G+L P+V + LY +FS F ++
Sbjct: 115 SLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSS-CSDA 173
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
++M D TG SRGFGF+S+ + + + AI MNG++L +RQI ++A K T G+ +
Sbjct: 174 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSS 233
Query: 203 AERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP-------RPYANGAAS 255
+ + S + TL P +N Q G + P Y + +
Sbjct: 234 DGKSVVELTTGSSEDGKETLNEETP---ENNSQFTTVYVGNLAPEVTQLDLHRYFHALGA 290
Query: 256 GPISAVR 262
G I VR
Sbjct: 291 GVIEEVR 297
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 42/200 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ L++ F + V D+ T +G+GFV FR+++DA AI +N
Sbjct: 147 FVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 206
Query: 88 MIKLYGKPIRVN-----------KASQDKKS---LDVGAN-------------------- 113
L + IR N K S D KS L G++
Sbjct: 207 GKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTT 266
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GNL P+V + L+ F A G ++ ++ RD +GFGF+ Y++ + AI+
Sbjct: 267 VYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRD------KGFGFVRYNTHPEAALAIQ 320
Query: 173 AMNGQ-YLCNRQITVSYAYK 191
N Q YL NRQI S+ K
Sbjct: 321 MGNTQPYLFNRQIKCSWGNK 340
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 10 GANLLGQHSAERN-QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQ 66
G L + + E N Q T YVGNL P+VT+ L F + AG + V V +D+
Sbjct: 249 GKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDK------ 302
Query: 67 GYGFVEFRSEEDADYAIKVLNMI-KLYGKPIRVN 99
G+GFV + + +A AI++ N L+ + I+ +
Sbjct: 303 GFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCS 336
>gi|357628251|gb|EHJ77641.1| poly A binding protein [Danaus plexippus]
Length = 601
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHSDITEAMLFEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPSDAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKAIDNKAMYDTFSAFGNILS- 118
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D + G S+G+GF+ +++ EA++ +IE +NG L +++ V
Sbjct: 119 CKVAQD-ENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 162
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV N ++E+L ++F + G + + V +D + +G+GFV F + A+ A
Sbjct: 186 YVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGSS---RGFGFVAFEDPDAAERACLE 242
Query: 86 LNMIKLY-GKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKL 127
LN +L GKP+ R K ++ +K L G NL++ NLD +D++
Sbjct: 243 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 302
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L F+ FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+
Sbjct: 303 LRKEFAPFGTI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 359
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 360 LAQRKEDR 367
>gi|302785327|ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
gi|300158033|gb|EFJ24657.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
Length = 642
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LDP VTE L+++F Q PV+++ V +D ++ GY +V + + +DA A+++
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEM 97
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ + +D G AN+FI NLD +D K LYDTF+ FG I++ K+
Sbjct: 98 LNFSLVNGKPIRIMFSHRDPSIRKSGMANIFIKNLDKSIDNKALYDTFAQFGNILS-CKV 156
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D +G SRG+GF+ ++ +A+ +AI+ +NG L +Q+ V
Sbjct: 157 AVDS-SGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFV 197
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL T++ L +F + GP+ + V +D + +GFV F + +DA A++
Sbjct: 217 NVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRD-PEGKSKCFGFVNFENADDAALAVEE 275
Query: 86 LNMIKLYGKPIRVNKA--------------SQDKKSLD---VGANLFIGNLDPDVDEKLL 128
LN K+ K V +A Q++K G NL++ NLD +D+ L
Sbjct: 276 LNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLDDTIDDDKL 335
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F FG I++ K+MRDP G+S+G GF+++ + E ++ A+ MNG+ + N+ I V+
Sbjct: 336 RELFHGFGTIIS-CKVMRDPQ-GHSKGSGFVAFSTTEEANRAMTEMNGRMVANKPIYVAL 393
Query: 189 AYKKDTK 195
A K+D +
Sbjct: 394 AQKRDER 400
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 95/176 (53%), Gaps = 8/176 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A ++ NLD + + L++ F Q G +++ V D + +GYGFV+F E+ A AIK
Sbjct: 125 ANIFIKNLDKSIDNKALYDTFAQFGNILSCKVAVDS-SGQSRGYGFVQFEQEDAAQSAIK 183
Query: 85 VLNMIKLYGKPIRVN-KASQDKKSLDVGA----NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+N + L K + V + ++ L G N+++ NL + L F FG I
Sbjct: 184 QVNGMLLIEKQVFVGPFVRRQERDLTGGVTKFNNVYVKNLGDATTDDDLKRVFGEFGPI- 242
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
++ +MRDP+ G S+ FGF+++++ + + A+E +NG+ + +++ V A KK +
Sbjct: 243 SSAVVMRDPE-GKSKCFGFVNFENADDAALAVEELNGKKMDDKEWYVGRAQKKSER 297
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+LDP+V E LYD F+ +++ ++ RD + S G+ +++Y++ + + A+E
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLS-IRVCRDLISKRSLGYAYVNYNTGQDASRALE 96
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + + I + ++++
Sbjct: 97 MLNFSLVNGKPIRIMFSHR 115
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +++ Q Y+ NLD + ++ L ELF G +++ V +D + +G GFV F +
Sbjct: 310 KERSDKYQGVNLYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQGH-SKGSGFVAFST 368
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
E+A+ A+ +N + KPI V A +
Sbjct: 369 TEEANRAMTEMNGRMVANKPIYVALAQK 396
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+LD V E L ELF Q VV++ V +D+ GY +V F S +DA A++
Sbjct: 35 SSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME 94
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKPIR+ +++D G AN+FI NLD +D K L DTF+AFG +++ K
Sbjct: 95 HLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKALRDTFAAFGTVLS-CK 153
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
+ D + G S+G+GF+ ++S E+++ +IE +NG L ++Q+ V + + + +G+
Sbjct: 154 VAVDSN-GQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFIRHQERIRANGSQF 212
Query: 204 ERILAANNPSS 214
+ N P +
Sbjct: 213 TNVYVKNLPET 223
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A +Q YV NL T++ L LF G + + V D + +GFV F++ +
Sbjct: 207 ANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDS-NGKSKCFGFVNFQNTDS 265
Query: 79 ADYAIKVLNMIKL-YGKPIRVNKA--------------SQDKKSLDV---GANLFIGNLD 120
A A++ L+ L K + V +A Q++KS GANL+I NLD
Sbjct: 266 AAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGANLYIKNLD 325
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D++ L + FS +G I T+ K+M D G S+G GF+++ S + + A+ MNG+
Sbjct: 326 DHIDDEKLKELFSEYGTI-TSCKVMLDQH-GLSKGSGFVAFSSPDEATKALNEMNGKMKG 383
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSS 214
+ + V+ A +K+ + R +I AA SS
Sbjct: 384 RKPLYVAVAQRKEERKARLQAQFAQIRAAGGISS 417
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+LD V E L ELF Q VV++ V +D+ GY +V F S +DA A++
Sbjct: 35 SSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME 94
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKPIR+ +++D G AN+FI NLD +D K L DTF+AFG +++ K
Sbjct: 95 HLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKALRDTFAAFGTVLS-CK 153
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
+ D + G S+G+GF+ ++S E+++ +IE +NG L ++Q+ V + + + +G+
Sbjct: 154 VAVDSN-GQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFIRHQERIRANGSQF 212
Query: 204 ERILAANNPSS 214
+ N P +
Sbjct: 213 TNVYVKNLPET 223
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A +Q YV NL T++ L LF G + + V D + +GFV F++ +
Sbjct: 207 ANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDS-NGKSKCFGFVNFQNTDS 265
Query: 79 ADYAIKVLNMIKL-YGKPIRVNKA--------------SQDKKSLDV---GANLFIGNLD 120
A A++ L+ L K + V +A Q++KS GANL+I NLD
Sbjct: 266 AAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELKAKFEQERKSRFEKLQGANLYIKNLD 325
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D++ L + FS +G I T+ K+M D G S+G GF+++ S + + A+ MNG+
Sbjct: 326 DHIDDEKLKELFSEYGTI-TSCKVMLDQH-GLSKGSGFVAFSSPDEATKALNEMNGKMKG 383
Query: 181 NRQITVSYAYKKDTKGERHGTPAERILAANNPSS 214
+ + V+ A +K+ + R +I AA SS
Sbjct: 384 RKPLYVAVAQRKEERKARLQAQFAQIRAAGGISS 417
>gi|405970795|gb|EKC35670.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 462
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 105/165 (63%), Gaps = 8/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+ + V +D +T GY +V F+ DA+ A+
Sbjct: 16 ASLYVGDLHPDVTEAMLFEKFSTAGPVLPIRVCRDMITRRSLGYAYVNFQQPADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 76 TMNFDTIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILS- 132
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
KI+ D SRG+GF+ +++ EA+ AIE +NG L +++ V
Sbjct: 133 CKIV--CDEHGSRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFV 175
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ + D + +GYGFV F +EE A AI+ +
Sbjct: 106 VFIKNLDKSIDNKALYDTFSAFGNILSCKIVCDE--HGSRGYGFVHFETEEAARIAIEKV 163
Query: 87 NMIKLYGKPIRVNKASQDKKSLDVGA-------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L GK + V + ++ L+V N+++ N +++++ L D F +G I+
Sbjct: 164 NGMLLNGKKVFVGRFMSRRERLEVLGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKII 223
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ K+M D +G +GFGF+S++ EA++ A+EA+NG + + V A KK +
Sbjct: 224 S-AKVMTDDGSGKGKGFGFVSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAEL 282
Query: 200 GTPAERI 206
ERI
Sbjct: 283 KEKFERI 289
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N ++ +E L ++F G +++ V D + +G+GFV F E A+ A++ L
Sbjct: 198 VYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFGFVSFEDPEAAEKAVEAL 257
Query: 87 NMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLY 129
N GK + V +A + K+ + G NL++ NLD ++D++ L
Sbjct: 258 NGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERINRYQGVNLYVKNLDDNIDDERLR 317
Query: 130 DTFSAFG 136
F+ FG
Sbjct: 318 KEFAQFG 324
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 105/177 (59%), Gaps = 3/177 (1%)
Query: 11 ANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
AN G A + + YVG+LD V + L++LF Q G VV+V V +D T GYG+
Sbjct: 26 ANNGGVGDARQFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGY 85
Query: 71 VEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLY 129
V + + +A A+ LN L GKPIR+ + +D GA N+FI NLD +D K L+
Sbjct: 86 VNYNAAHEATRALDELNFTPLNGKPIRIMYSYRDPTIRKSGAGNIFIKNLDKSIDNKALH 145
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
DTFS FG I++ K+ D G SRG+GF+ +D+ E++ +AI+ +NG L ++Q+ V
Sbjct: 146 DTFSTFGNILS-CKVATDS-LGQSRGYGFVQFDNEESAKSAIDKLNGMLLNDKQVFV 200
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ + YV NL TE+ L ++F + G + + V +D + +GFV F
Sbjct: 210 ESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRD-ADGKSKCFGFVNFDD 268
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGN 118
+DA +++ LN K K V KA + K++ D G NL++ N
Sbjct: 269 PDDAARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLNLYVKN 328
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD + + L + FS FG I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+
Sbjct: 329 LDDSISDDKLKELFSEFGTI-TSCKVMRDPN-GISRGSGFVAFSTAEEASKALTEMNGKM 386
Query: 179 LCNRQITVSYAYKKDTKGER 198
+ ++ + V+ A +K+ + R
Sbjct: 387 VVSKPLYVALAQRKEERRAR 406
>gi|302808075|ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
gi|300146641|gb|EFJ13310.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
Length = 635
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LDP VTE L+++F Q PV+++ V +D ++ GY +V + + +DA A+++
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEM 97
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ + +D G AN+FI NLD +D K LYDTF+ FG I++ K+
Sbjct: 98 LNFSLVNGKPIRIMFSHRDPSIRKSGMANIFIKNLDKSIDNKALYDTFAQFGNILS-CKV 156
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D +G SRG+GF+ ++ +A+ +AI+ +NG L +Q+ V
Sbjct: 157 AVDS-SGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFV 197
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 20/187 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL T++ L +F + GP+ + V +D + +GFV F + +DA A++
Sbjct: 217 NVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRD-PEGKSKCFGFVNFENADDAALAVEE 275
Query: 86 LNMIKLYGKPIRVNKA--------------SQDKKSLD---VGANLFIGNLDPDVDEKLL 128
LN K+ K V +A Q++K G NL++ NLD +D+ L
Sbjct: 276 LNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLDDTIDDDKL 335
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F FG I++ K+MRDP G+S+G GF+++ + E ++ A+ MNG+ + N+ I V+
Sbjct: 336 RELFHGFGTIIS-CKVMRDP-QGHSKGSGFVAFSTTEEANRAMTEMNGRMVANKPIYVAL 393
Query: 189 AYKKDTK 195
A K+D +
Sbjct: 394 AQKRDER 400
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 95/176 (53%), Gaps = 8/176 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A ++ NLD + + L++ F Q G +++ V D + +GYGFV+F E+ A AIK
Sbjct: 125 ANIFIKNLDKSIDNKALYDTFAQFGNILSCKVAVDS-SGQSRGYGFVQFEQEDAAQSAIK 183
Query: 85 VLNMIKLYGKPIRVN-KASQDKKSLDVGA----NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+N + L K + V + ++ L G N+++ NL + L F FG I
Sbjct: 184 QVNGMLLIEKQVFVGPFVRRQERDLTGGIAKFNNVYVKNLGDATTDDDLKRVFGEFGPI- 242
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
++ +MRDP+ G S+ FGF+++++ + + A+E +NG+ + +++ V A KK +
Sbjct: 243 SSAVVMRDPE-GKSKCFGFVNFENADDAALAVEELNGKKMDDKEWYVGRAQKKSER 297
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+LDP+V E LYD F+ +++ ++ RD + S G+ +++Y++ + + A+E
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLS-IRVCRDLISKRSLGYAYVNYNTGQDASRALE 96
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + + I + ++++
Sbjct: 97 MLNFSLVNGKPIRIMFSHR 115
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +++ Q Y+ NLD + ++ L ELF G +++ V +D + +G GFV F +
Sbjct: 310 KERSDKYQGVNLYLKNLDDTIDDDKLRELFHGFGTIISCKVMRDPQGH-SKGSGFVAFST 368
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
E+A+ A+ +N + KPI V A +
Sbjct: 369 TEEANRAMTEMNGRMVANKPIYVALAQK 396
>gi|354544113|emb|CCE40835.1| hypothetical protein CPAR2_108740 [Candida parapsilosis]
Length = 650
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 106/173 (61%), Gaps = 8/173 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG L+P V E L+E+F G V ++ V +D VT GY +V + ED + AI
Sbjct: 63 ASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNYHKFEDGEKAID 122
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN + G+P R+ + +D ++S D N+FI NL P +D K L+DTFSAFG I++
Sbjct: 123 ELNYSLVEGRPCRIMWSQRDPSARRSGD--GNIFIKNLHPAIDNKALHDTFSAFGRILS- 179
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKD 193
K+ D D G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + KKD
Sbjct: 180 CKVATD-DMGQSKCFGFVHYETGEAAEAAIENVNGMLLNDREVFVGKHVSKKD 231
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 49/264 (18%)
Query: 13 LLGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT 62
+G+H +++++++ YV N+D TE+ ELF G + ++Y+ KD+
Sbjct: 222 FVGKHVSKKDRESKFEEMKANYTNIYVKNIDLGFTEKEFEELFAPYGKITSIYLEKDQ-D 280
Query: 63 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DK 105
+G+GFV + + A A++ LN ++ G+ I V +A + +K
Sbjct: 281 GKSKGFGFVNYEEHKSAVDAVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEK 340
Query: 106 KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFE 165
S G NLFI NLD +D + L + F FG I T+ K+M D D G S+GFGF+ + + E
Sbjct: 341 LSKYQGVNLFIKNLDDQIDSEKLEEEFKPFGTI-TSAKVMVD-DAGKSKGFGFVCFSTPE 398
Query: 166 ASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFAS 225
+ AI MN + + + + V+ A +KD R ++I A N
Sbjct: 399 EATKAITEMNQRMINGKPLYVALAQRKDV---RRSQLEQQIQARNQ-------------- 441
Query: 226 GPPSLQNAPQANGTVGGPVPPRPY 249
+QNA A G G +PP Y
Sbjct: 442 --MRMQNAAAAGGFPGQFMPPMYY 463
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 104/196 (53%), Gaps = 10/196 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA R+ D ++ NL P + + L + F G +++ V D + + +GFV + + E
Sbjct: 144 SARRSGDGNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDDMGQ-SKCFGFVHYETGE 202
Query: 78 DADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYD 130
A+ AI+ +N + L + + V+K ++ K ++ AN +++ N+D EK +
Sbjct: 203 AAEAAIENVNGMLLNDREVFVGKHVSKKDRESKFEEMKANYTNIYVKNIDLGFTEKEFEE 262
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ + +D D G S+GFGF++Y+ +++ A+EA+N + + ++I V A
Sbjct: 263 LFAPYGKI-TSIYLEKDQD-GKSKGFGFVNYEEHKSAVDAVEALNDKEINGQKIYVGRAQ 320
Query: 191 KKDTKGERHGTPAERI 206
KK + E E I
Sbjct: 321 KKRERTEELKKQYEAI 336
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++ LN
Sbjct: 51 YVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLN 110
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 146
+ G+ R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K+
Sbjct: 111 YSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFAAFGNVLS-CKVAT 169
Query: 147 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D + G S+G+GF+ Y++ EA+D AI+A+NG L ++++ V
Sbjct: 170 D-EHGRSKGYGFVHYETAEAADTAIKAVNGMLLNDKKVYV 208
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q YV N+D +VT+E +LF Q G V + + +D +G+GFV F E+A
Sbjct: 227 QFTNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDE-EGRSKGFGFVNFEKHEEAQKG 285
Query: 83 IKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDE 125
++ L+ +L GK + V +A + +K S G NL+I NL+ +VD+
Sbjct: 286 VESLHDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLEDEVDD 345
Query: 126 KLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQIT 185
+ L F FG I T+ K+MRD + G+S+GFGF+ + S + + A+ MN + + + +
Sbjct: 346 ERLRQEFEPFGTI-TSAKVMRD-EKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLY 403
Query: 186 VSYAYKKDTK 195
VS A +++ +
Sbjct: 404 VSLAQRREVR 413
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G V++ V D +GYGFV + + E AD AIK +N
Sbjct: 139 FIKNLDEGIDNKALHDTFAAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAADTAIKAVN 197
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A N+++ N+D +V ++ F FG VT
Sbjct: 198 GMLLNDKKVYVGPHISRKERQSKIEEMKAQFTNVYVKNIDAEVTDEEFRQLFEQFGN-VT 256
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ I RD + G S+GFGF++++ E + +E+++ L +++ V+ A KK + E
Sbjct: 257 SAVIQRDEE-GRSKGFGFVNFEKHEEAQKGVESLHDFELNGKKLFVTRAQKKAEREE 312
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + + A+E
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 108
Query: 174 MNGQYLCNRQITVSYA 189
+N + R + ++
Sbjct: 109 LNYSLIKGRACRIMWS 124
>gi|328782034|ref|XP_396057.4| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 601
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 106/158 (67%), Gaps = 7/158 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLL 164
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 27/172 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + +++ F G +++ V +D + + +GYGFV F +EE A+ +I +N
Sbjct: 102 FIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDE-SGVSKGYGFVHFETEEAANKSIDRVN 160
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
+ L GK N D+ + L + F +G I ++ +++D
Sbjct: 161 GMLLNGKK----------------------NFGEDMTDDKLKEMFEKYGTITSHKVMIKD 198
Query: 148 PDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
G SRGFGF++++ +A++ A+ +NG+ + + Y + K ER
Sbjct: 199 D--GKSRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCM--YVGRAQKKAERQ 246
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 31 NLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNM 88
N +T++ L E+F + G + + V + D + +G+GFV F + A+ A+ LN
Sbjct: 169 NFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKS---RGFGFVAFEDPDAAEQAVLELNG 225
Query: 89 IKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
++ GK + V +A + K+ + G NL++ NLD +D++ L
Sbjct: 226 KEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERLRK 285
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+ A
Sbjct: 286 EFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQ 342
Query: 191 KKDTK 195
+K+ +
Sbjct: 343 RKEDR 347
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + A+
Sbjct: 42 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALD 101
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 102 ELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS-CK 160
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D + G S+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K +
Sbjct: 161 VAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR 211
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D + +GYGFV + + E A+ AIK +N
Sbjct: 133 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEF-GVSKGYGFVHYETAEAANNAIKHVN 191
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + ++K + K ++ AN ++I N+DP+V+++ F FG I T
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEI-T 250
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E
Sbjct: 251 SATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREE 306
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 69/235 (29%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+DP+V +E +LF + G + + + +D +G+GFV F + E A A++ +N
Sbjct: 226 YIKNIDPEVEDEEFRKLFEKFGEITSATLSRDS-EGKSRGFGFVNFSTHESAQAAVEEMN 284
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ + + V +A + +K S G NL++ NL DVD+ L +
Sbjct: 285 DKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLRE 344
Query: 131 TFSAFGVIVTNPKIMRD--------PDT-------------------------------- 150
F +G I T+ K+MRD P++
Sbjct: 345 LFGPYGTI-TSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEKEEKKE 403
Query: 151 ----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + S + + A+ MN + + + + V+ A +KD +
Sbjct: 404 AEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 458
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 111/188 (59%), Gaps = 9/188 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
AT YVG+L P+V E L+E+F GPV +V V +D VT GY +V F S +DA+ A++
Sbjct: 77 ATIYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERALE 136
Query: 85 VLNMI---KLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+N + KP+R+ ++D GA N+FI NLD +D K L+DTFS FG I++
Sbjct: 137 TMNFYACPQTRDKPMRLMWKNRDPTIRKSGAGNVFIKNLDKAIDNKTLFDTFSVFGNILS 196
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+ D D GNS G+GF+ +++ E ++ AI +NG L ++Q+ V Y +K ++ ER
Sbjct: 197 -CKVATD-DEGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQVYVGY-FK--SRQEREA 251
Query: 201 TPAERILA 208
+ I
Sbjct: 252 SEETHIFT 259
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 23/212 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQV-TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+ S E + Y NL P + TEE + ELF G + +VYVP D + +G+ FV F
Sbjct: 250 EASEETHIFTNVYTKNLIPSMCTEEKIRELFSLYGEITSVYVPVDE-NEVPKGFAFVNFA 308
Query: 75 SEEDADYAIKVLNMIKLYGKPIRVNKASQ------------DKKSLDV-----GANLFIG 117
E A A++ LN GK + V +A + + K ++ G NL++
Sbjct: 309 KPECAAKAVEELNGRDFEGKSLYVGRAQKKAEREAELRRKAENKRAEILKKYQGVNLYVR 368
Query: 118 NLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
NL D+DE+ L FS FG + T+ ++MRD D G SRGFGF+ + + E + A+ MNG+
Sbjct: 369 NLPDDMDEEGLRKEFSNFGTL-TSCRVMRD-DKGVSRGFGFVCFSTPEEATKAVTEMNGK 426
Query: 178 YLCNRQITVSYAYKKDTKGERHGTPAERILAA 209
+ + + V A +K+ + + A+RI AA
Sbjct: 427 MMGKKPLYVCLAQRKEIR--QAQLEAQRIAAA 456
>gi|350408508|ref|XP_003488428.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
impatiens]
Length = 601
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 106/158 (67%), Gaps = 7/158 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 71 TMNFDMIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
K+ +D ++G S+G+GF+ +++ EA++ +I+ +NG L
Sbjct: 128 CKVAQD-ESGVSKGYGFVHFETEEAANKSIDRVNGMLL 164
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 27/172 (15%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + +++ F G +++ V +D + + +GYGFV F +EE A+ +I +N
Sbjct: 102 FIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDE-SGVSKGYGFVHFETEEAANKSIDRVN 160
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD 147
+ L GK N D+ + L D F +G I ++ +++D
Sbjct: 161 GMLLNGKK----------------------NFGEDMTDDKLKDMFEKYGTITSHKVMIKD 198
Query: 148 PDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
G SRGFGF++++ +A++ A+ +NG+ + + Y + K ER
Sbjct: 199 D--GKSRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCM--YVGRAQKKAERQ 246
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 31 NLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNM 88
N +T++ L ++F + G + + V + D + +G+GFV F + A+ A+ LN
Sbjct: 169 NFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKS---RGFGFVAFEDPDAAEQAVLELNG 225
Query: 89 IKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
++ GK + V +A + K+ + G NL++ NLD +D++ L
Sbjct: 226 KEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERLRK 285
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + + + V+ A
Sbjct: 286 EFAPFGTI-TSAKVMMEE--GRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQ 342
Query: 191 KKDTK 195
+K+ +
Sbjct: 343 RKEDR 347
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
D YVGNLD +TE+LL + F GP+ NV + +D + N + Y FVE+ DA+ A+
Sbjct: 57 DRVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIED-MKNEYVNYAFVEYIRSHDANVAL 115
Query: 84 KVLNMIKLYGKPIRVNKA--SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN ++L K +++N A +Q D NLF+G+L+ DVD++ L TF F +
Sbjct: 116 QTLNGVQLENKTLKINWAFETQQAAENDDTFNLFVGDLNVDVDDETLAGTFREFPTFIQ- 174
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
+M D TG SRG+GF+S+ + E + A++AM G+ L RQI +++A K++
Sbjct: 175 AHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATKRE 226
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q +AE + +VG+L+ V +E L F + + +V D T +GYGFV F +
Sbjct: 137 QQAAENDDTFNLFVGDLNVDVDDETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSN 196
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANL 114
+E+A A+ + L G+ IR+N A+ K+ ++G N
Sbjct: 197 QEEAQKAMDAMQGKDLSGRQIRINWAT--KRERNMGNNF 233
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E+F GPV ++ V +D VT GY +V + S +DA A++
Sbjct: 27 ASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAQEALE 86
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN I++ G P R+ +++D GA N+F+ NLD +D K LYDTFS FG I++ K
Sbjct: 87 NLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILS-CK 145
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 197
+ D +G S+ +GF+ Y++ E++ AIE +NG + +++ V+ + K+D + E
Sbjct: 146 VAVDA-SGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDRESE 199
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NLD + + L++ F GP+++ V D + + YGFV + +EE
Sbjct: 108 SLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFGPILSCKVAVD-ASGASKRYGFVHYENEE 166
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
A AI+ +N + + GK + V QD++S +V NL++ N D DE+ L +
Sbjct: 167 SAREAIEKVNGMLIGGKRVEVAPFLRKQDRESEEVFTNLYVRNFPADWDEEALRQFLEKY 226
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
G I + M + R F F++Y E + + +N L
Sbjct: 227 GEITS----MMLKEDSKGRRFAFVNYKEPEVAKEVVNTLNDLKL 266
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 24/185 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N EE L + + G + ++ + +D + + + FV ++ E A + LN
Sbjct: 206 YVRNFPADWDEEALRQFLEKYGEITSMMLKED---SKGRRFAFVNYKEPEVAKEVVNTLN 262
Query: 88 MIKL--YGKPIRV-----------------NKASQDKKSLDVGANLFIGNLDPDVDEKLL 128
+KL +P+ V N ++ ++ V +NL+I NLD D++ L
Sbjct: 263 DLKLEESSEPLLVCPHQDKAKRQNLLRAQFNNSTMAQEDKRVTSNLYIKNLDDSFDDESL 322
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F FG I T+ K+M D + +SRGFGF+ + + + + AI AM+ + + + + V
Sbjct: 323 GELFKPFGTI-TSSKVMLDAN-NHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYVGL 380
Query: 189 AYKKD 193
A K+D
Sbjct: 381 AEKRD 385
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ Y+ NLD +E L ELF G + + V D N +G+GFV F + ++A AI
Sbjct: 306 SNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLD-ANNHSRGFGFVCFTNPQEATKAIA 364
Query: 85 VLNMIKLYGKPIRVNKASQ 103
+++ + GKP+ V A +
Sbjct: 365 AMHLKLVKGKPLYVGLAEK 383
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 9/175 (5%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPV-VNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVGN+ QVTE LL E+F GPV + + KD+ + YGFV + A AI
Sbjct: 60 SVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSS-----YGFVHYFDRRSAALAIL 114
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN L+G+PI+VN A + D + N+F+G+L P+V + LY +FS F ++
Sbjct: 115 SLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSS-CSDA 173
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
++M D TG SRGFGF+S+ + + + AI MNG++L +RQI ++A K T G+
Sbjct: 174 RVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGD 228
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 42/200 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ L++ F + V D+ T +G+GFV FR+++DA AI +N
Sbjct: 147 FVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 206
Query: 88 MIKLYGKPIRVN-----------KASQDKKS---LDVGAN-------------------- 113
L + IR N K S D KS L G++
Sbjct: 207 GKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTT 266
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GNL P+V + L+ F A G ++ ++ RD +GFGF+ Y++ + AI+
Sbjct: 267 VYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRD------KGFGFVRYNTHPEAALAIQ 320
Query: 173 AMNGQ-YLCNRQITVSYAYK 191
N Q YL NRQI S+ K
Sbjct: 321 MGNTQPYLFNRQIKCSWGNK 340
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 10 GANLLGQHSAERN-QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQ 66
G L + + E N Q T YVGNL P+VT+ L F + AG + V V +D+
Sbjct: 249 GKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDK------ 302
Query: 67 GYGFVEFRSEEDADYAIKVLNMI-KLYGKPIRVN 99
G+GFV + + +A AI++ N L+ + I+ +
Sbjct: 303 GFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCS 336
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 7/170 (4%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E + + YVG+L+ TE L+ELF GPVV++ V +D +T GY +V F +DA
Sbjct: 38 ENASNTSLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDA 97
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFG 136
AI VLN + GKPIR+ + +D +KS VG N+FI NLD D+D L DTF+ FG
Sbjct: 98 ARAIDVLNFQVVNGKPIRILYSQRDPTIRKS-GVG-NIFIKNLDKDIDTVALRDTFAQFG 155
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
IV+ K+ D GNS+G+GFI +D+ A+ AIE +NG L ++ + V
Sbjct: 156 NIVS-AKVATDGQ-GNSKGYGFIQFDTEAAAKEAIEKVNGMELNDKVVYV 203
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 29/207 (14%)
Query: 16 QHSAERNQDAT----AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
Q AER T +V NL +VT+E L ++F GPV +V + KD +G+GFV
Sbjct: 207 QRRAERGTTETKFNNVFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDE-DGKSKGFGFV 265
Query: 72 EFRSEEDADYAIKVLNMIKLYGKP------IRVNKASQDKKSLDV--------------G 111
+ + EDA A++ L+ +G+ R K ++ + L G
Sbjct: 266 CYETPEDASKAVEELD--GKHGEEDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAG 323
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
ANL+I NL+ D++ L + F FG I T+ ++MRD +G SRG F+++ S E + A+
Sbjct: 324 ANLYIKNLEDGADDETLRELFKEFGTI-TSCRVMRDA-SGVSRGSAFVAFSSPEEATRAV 381
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
+NG+ + + + V+ A +K+ + R
Sbjct: 382 TELNGKMVGAKPLYVALAQRKEDRRMR 408
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + L + F Q G +V+ V D N +GYGF++F +E A AI+ +N
Sbjct: 134 FIKNLDKDIDTVALRDTFAQFGNIVSAKVATDGQGN-SKGYGFIQFDTEAAAKEAIEKVN 192
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
++L K + R + + + K N+F+ NL +V ++ L F FG VT
Sbjct: 193 GMELNDKVVYVGPFQRRAERGTTETKF----NNVFVKNLGDEVTDEELRKVFEGFGP-VT 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
+ I +D D G S+GFGF+ Y++ E + A+E ++G++
Sbjct: 248 SVMISKDED-GKSKGFGFVCYETPEDASKAVEELDGKH 284
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 104/171 (60%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E LL+++F G V ++ V +D +T GY +V F E AI+
Sbjct: 42 ASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIE 101
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G P R+ + +D G+ N+FI NL PD+D K L+DTFS FG I++ K
Sbjct: 102 KLNYAPIKGVPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKALHDTFSVFGNILS-CK 160
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKD 193
I D + GNSRGFGF+ ++ EA+ AI+A+NG L +++ V+ + KKD
Sbjct: 161 IATD-EAGNSRGFGFVHFEDDEAAKEAIDAINGMLLNGQEVYVAQHVSKKD 210
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N+ P +E E F + GP+ + ++ KD L +G+GFV + + DA A++
Sbjct: 223 TNVYVKNIHPDTGDEEFEEFFTKVGPITSAHLEKDNEGKL-RGFGFVNYENHNDAAKAVE 281
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKL 127
LN G+ + V +A + + L G NLF+ NLD +D++
Sbjct: 282 ELNETDFKGQTLHVGRAQKKHERLQELKKQYEAFRLEKLEKYQGVNLFVKNLDDTIDDQK 341
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+
Sbjct: 342 LEEEFAPYGTI-TSVKVMR-SENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 399
Query: 188 YAYKKDTKGERHGTPAERILAANNPSSQK 216
A +KD R A++I A N Q+
Sbjct: 400 IAQRKDV---RRSQLAQQIQARNQMRYQQ 425
>gi|392355792|ref|XP_228576.4| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 456
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E F AGP++++ + +D+VT GY +V ++ DA A++
Sbjct: 258 ASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALE 317
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++
Sbjct: 318 TMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 377
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGER 198
D +G+GF+ + E+++ AI+A+NG +L R+I V + K+ + ER
Sbjct: 378 AC---DEKGPKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAER 430
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L V + L++LF Q VV+V + +D T GYG+V F + DA AI V
Sbjct: 25 SLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNAHDAAKAIDV 84
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GK IR+ + +D + G AN+FI NLD +D K LYDTFSAFG I++ K+
Sbjct: 85 LNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALYDTFSAFGNILS-CKV 143
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPA 203
D +G S+G GF+ ++S E++ AI+ +NG + ++Q+ V + K+D + GT
Sbjct: 144 ATDA-SGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFVGPFLRKQDRESALSGTKF 202
Query: 204 ERILAAN 210
+ N
Sbjct: 203 NNVFVKN 209
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NL +TE L +F + G + + V +D V +G+GFV F + +DA A++ LN
Sbjct: 206 FVKNLLDSMTEADLERIFGEYGAITSAVVMRD-VDGKSKGFGFVNFANVDDAAKAVEALN 264
Query: 88 MIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLDPDVDEKLLYD 130
GK V KA + K+++D G NL+I NLD V ++ L +
Sbjct: 265 GKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEELME 324
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+MRDP+ G SRG GF+S+ E + A+ MNG+ + + + V+ A
Sbjct: 325 LFSEFGTI-TSCKVMRDPN-GISRGSGFVSFSIAEGATRALGEMNGKMVAGKPLYVALAQ 382
Query: 191 KKDTKGER 198
+K+ + R
Sbjct: 383 RKEDRRAR 390
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA ++ A ++ NLD + + L++ F G +++ V D + +G+GFV+F SEE
Sbjct: 105 SARKSGAANVFIKNLDKAIDHKALYDTFSAFGNILSCKVATD-ASGQSKGHGFVQFESEE 163
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTF 132
A AI LN + + K + V QD++S G N+F+ NL + E L F
Sbjct: 164 SAQNAIDKLNGMLINDKQVFVGPFLRKQDRESALSGTKFNNVFVKNLLDSMTEADLERIF 223
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +MRD D G S+GFGF+++ + + + A+EA+NG+ ++ V A KK
Sbjct: 224 GEYGAI-TSAVVMRDVD-GKSKGFGFVNFANVDDAAKAVEALNGKNFDGKEWYVGKAQKK 281
Query: 193 -----DTKGERHGTPAERI 206
+ KG+ E +
Sbjct: 282 SERELELKGQHEQITKETV 300
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 13 LLGQH------SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQ 66
L GQH + ++ Y+ NLD V +E L ELF + G + + V +D + +
Sbjct: 288 LKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDP-NGISR 346
Query: 67 GYGFVEFRSEEDADYAIKVLNMIKLYGKPIRV 98
G GFV F E A A+ +N + GKP+ V
Sbjct: 347 GSGFVSFSIAEGATRALGEMNGKMVAGKPLYV 378
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 110/174 (63%), Gaps = 9/174 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADY 81
A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+ A+
Sbjct: 6 AHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYMDMRAAET 63
Query: 82 AIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
A++ LN K++ IRVN A SQ+K+ ++F+G+L P+V +++L FSAFG +
Sbjct: 64 ALQTLNGRKIFDTEIRVNWAYQGSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTL 123
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 124 -SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 176
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + + +VG+L P+V++E+L + F G + + V D + +GYGF+ FR
Sbjct: 88 QNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRD 147
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+ DA+ AI +N L + IRVN A+Q
Sbjct: 148 KTDAEQAIATMNGEWLGSRAIRVNWANQ 175
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 244 NTTVYVGNLVPYTTQADLIPLFQGIGYISEIRMQADR------GFAFVKLDTHEHAALAI 297
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG 111
L ++G+PI+ + +D+ S + G
Sbjct: 298 VQLQGQLVHGRPIKCSWG-KDRASGETG 324
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V +
Sbjct: 129 KVVC---DEHGSRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGH 172
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQNAISTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ +++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD D+G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRD-DSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVVNMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 42 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 101
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + + R+ + +D G N+FI NLD +D K L+DTF AFG +++ K
Sbjct: 102 QLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLS-CK 160
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S+G+GF+ Y++ EA+D AI+++NG L ++++ V + + +
Sbjct: 161 VATD-EHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKER 211
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q Y+ NLD +VT+E ELF + G V + V D +G+GFV + E+A
Sbjct: 219 KAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDE-EGKSKGFGFVNYERHEEAQ 277
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ L+ L GK + V +A + +K S G NL+I NL+ D
Sbjct: 278 RAVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDF 337
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F FG I T+ K+MRD + G S+GFGF+ + S + + A+ MN + + +
Sbjct: 338 DDDKLRAEFEPFGAI-TSCKVMRD-EKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKP 395
Query: 184 ITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 396 LYVSLAQRREVR 407
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 94/172 (54%), Gaps = 10/172 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + FV G V++ V D +GYGFV + + E AD AIK +N
Sbjct: 133 FIKNLDEAIDNKALHDTFVAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAADNAIKSVN 191
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A NL+I NLD +V ++ + F+ +G + +
Sbjct: 192 GMLLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTS 251
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ ++ + G S+GFGF++Y+ E + A++ ++ L +++ V+ A KK
Sbjct: 252 S--LVATDEEGKSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKK 301
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P V+E L+E+F Q GPV N+ + +D T Y ++ + + DA+ A+
Sbjct: 8 SSLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAERALD 67
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GK R+ + +D G N+FI NLD VD K LYDTFSAFG I++ K
Sbjct: 68 TLNNTPIKGKACRIMWSQRDPSLRKSGIGNIFIKNLDKTVDHKALYDTFSAFGNILS-CK 126
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
++ D +T S+GFGF+ Y+S E+++ AI +NG + N+++ V
Sbjct: 127 VVTD-ETNTSKGFGFVHYESQESAEKAIAKVNGMMINNQKVFV 168
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD V + L++ F G +++ V D TN +G+GFV + S+E A+ AI +N
Sbjct: 99 FIKNLDKTVDHKALYDTFSAFGNILSCKVVTDE-TNTSKGFGFVHYESQESAEKAIAKVN 157
Query: 88 --MI---KLYGKPIRVNK---ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
MI K++ P + +K A+Q+ K N+FI NL DV E+ L D A G I
Sbjct: 158 GMMINNQKVFVGPFKSSKERGATQEVKY----TNVFIKNLSEDVSEQQLTDLLQAHGKI- 212
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
TN IM D + G S+GFGF +++ +A+ A+E NG+ + I V A KK
Sbjct: 213 TNLCIMTD-EKGKSKGFGFANFEHADAAKGAVENENGKMFSGKVIYVGRAQKK 264
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 12/179 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NL V+E+ L +L G + N+ + D +G+GF F + A A++
Sbjct: 188 VFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTDE-KGKSKGFGFANFEHADAAKGAVENE 246
Query: 87 NMIKLYGKPIRVNKASQD-------KKSLDV---GANLFIGNLDPDVDEKLLYDTFSAFG 136
N GK I V +A + K + G NL+I NLD +D L TFSA+G
Sbjct: 247 NGKMFSGKVIYVGRAQKKLEREAELKHKFETKYQGVNLYIKNLDDSIDSDKLRATFSAYG 306
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I T+ K+MRD +S+GFGF+ Y + + + A+ M+G+ + ++ + V++A +KD +
Sbjct: 307 TI-TSSKVMRDDKGSSSKGFGFVCYSTPDEASKAVAEMHGRMVGSKPLYVAFAQRKDVR 364
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 42 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 101
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + + R+ + +D G N+FI NLD +D K L+DTF AFG +++ K
Sbjct: 102 QLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFGNVLS-CK 160
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S+G+GF+ Y++ EA+D AI+++NG L ++++ V + + +
Sbjct: 161 VATD-EHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKER 211
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q Y+ NLD +VT+E ELF + G V + V D +G+GFV + E+A
Sbjct: 219 KAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDE-EGKSKGFGFVNYERHEEAQ 277
Query: 81 YAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDV 123
A+ L+ L GK + V +A + +K S G NL+I NL+ D
Sbjct: 278 RAVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDF 337
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D+ L F FG I T+ K+MRD + G S+GFGF+ + S + + A+ MN + + +
Sbjct: 338 DDDKLRAEFEPFGAI-TSCKVMRD-EKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKP 395
Query: 184 ITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 396 LYVSLAQRREVR 407
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 94/172 (54%), Gaps = 10/172 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + FV G V++ V D +GYGFV + + E AD AIK +N
Sbjct: 133 FIKNLDEAIDNKALHDTFVAFGNVLSCKVATDE-HGRSKGYGFVHYETAEAADNAIKSVN 191
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A NL+I NLD +V ++ + F+ +G + +
Sbjct: 192 GMLLNDKKVYVGHHISRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTS 251
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ ++ + G S+GFGF++Y+ E + A++ ++ L +++ V+ A KK
Sbjct: 252 S--LVATDEEGKSKGFGFVNYERHEEAQRAVDELHDTDLKGKKLFVARAQKK 301
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LD VTE +L+ELF Q G V ++ V +D ++ GY +V + + D + A++
Sbjct: 61 ASLYVGELDTSVTEAMLFELFSQIGSVASIRVCRDAISRRSLGYAYVNYNTTADGEKALE 120
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILS-CK 179
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTK 195
+ +D ++G S+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD +
Sbjct: 180 VAQD-ESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKDRQ 231
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 11/199 (5%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+N ++ NLD + + L + F G +++ V +D + +GYGFV + ++E A
Sbjct: 145 KNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDE-SGASKGYGFVHYETDEAAA 203
Query: 81 YAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFS 133
AIK +N + L K + V K + K ++ AN +++ N+ + E+ + F
Sbjct: 204 QAIKHVNGMLLNEKKVFVGHHIPKKDRQSKFEEMKANFTNIYVKNIPVEATEEEFRELFE 263
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
FG VT+ + RD +TG SRGFGF+++ + E + A++ +NG+ + + V A KK
Sbjct: 264 KFG-DVTSASLARDAETGKSRGFGFVNFINHEHAATAVDELNGKDFKGQDLYVGRAQKKH 322
Query: 194 TKGE--RHGTPAERILAAN 210
+ E R A RI A+
Sbjct: 323 EREEELRRSYEAARIEKAS 341
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 66/233 (28%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+ + TEE ELF + G V + + +D T +G+GFV F + E A A+ LN
Sbjct: 245 YVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATAVDELN 304
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A + +K S G NL++ NLD D+D++ L +
Sbjct: 305 GKDFKGQDLYVGRAQKKHEREEELRRSYEAARIEKASKYQGVNLYVKNLDDDIDDEKLRE 364
Query: 131 TFSAFGVIVTNPKIMRDP------------------------------------------ 148
F +FG I T+ K+MRD
Sbjct: 365 LFQSFGSI-TSAKVMRDTPAETAEAEEKKEKDEEKNKENKDTKETKETKKEGEAETEEAS 423
Query: 149 ------DTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ +++ + + A+ MN + + N+ + V+ A +KD +
Sbjct: 424 APKAKRSLGKSKGFGFVCFNNPDEATKAVSDMNQRMVNNKPLYVALAQRKDVR 476
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L V E L LF Q PV V V +D ++ + GYG+V F S ++A A++
Sbjct: 35 ASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALE 94
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L GK IRV +++D G ANLF+ NL+P++D K LY+ FS+FG I++ K
Sbjct: 95 ALNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILS-CK 153
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D G S+G+GF+ Y++ E+++AAI +NG NR++ V ++ +
Sbjct: 154 VATD-SAGQSKGYGFVQYETEESAEAAINGLNGMLANNRKMFVGLHMRRRDR 204
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ A +V NL+P + + L+E+F G +++ V D +GYGFV++ +EE
Sbjct: 116 SLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQ-SKGYGFVQYETEE 174
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
A+ AI LN + + + V + + N++I NL + E L F+ FG
Sbjct: 175 SAEAAINGLNGMLANNRKMFVGLHMRRRDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGE 234
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I T+ +MRD D G S+ FGF+++ E + A+E NG+ + ++ + V A KK+ +
Sbjct: 235 I-TSAVVMRDAD-GASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEER 290
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 137/335 (40%), Gaps = 73/335 (21%)
Query: 13 LLGQHSAERNQDA---TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYG 69
+G H R+++ Y+ NL + +E+ L + F G + + V +D + +G
Sbjct: 194 FVGLHMRRRDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRD-ADGASKCFG 252
Query: 70 FVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GA 112
FV F+ E A A++ N + K + R K + K L G
Sbjct: 253 FVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGI 312
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
NL++ N+D ++++ L F FG V + K+M D G S+G GF+S+ + EA AI
Sbjct: 313 NLYLKNIDDGINDEGLKKLFEEFGQ-VASCKVMVDA-RGRSKGSGFVSFATAEAGQRAIN 370
Query: 173 AMNGQYLCNRQITVSYAY-KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
MNG+ + + + V A K++ K A+R LA +SQ + P ++
Sbjct: 371 RMNGRIVGKKPLYVGLAQPKEERKAMLMAHFAQRNLAM--AASQYAGPQQVY-------- 420
Query: 232 NAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHI 291
G P P GPI+ PPQ A F G PQH
Sbjct: 421 --------FGHPSSP---------GPIA-------PPQGAVF------------GFPQHF 444
Query: 292 --GQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAM 324
G G PVM PP + P P P P + AM
Sbjct: 445 VPGMGPISPVMMPPHNMQ-RPRYPGPAPYRQQQAM 478
>gi|119113388|ref|XP_309558.3| AGAP011092-PA [Anopheles gambiae str. PEST]
gi|116131767|gb|EAA05186.3| AGAP011092-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 113/183 (61%), Gaps = 7/183 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +TE L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHSDITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDPIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKKIDNKAMYDTFSAFGNILS- 118
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ +D + G S+G+GF+ +++ E+++ +IE +NG L +++ V + + + G
Sbjct: 119 CKVAQD-EKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVYVGRFISRKEREKELGE 177
Query: 202 PAE 204
A+
Sbjct: 178 KAK 180
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 100/186 (53%), Gaps = 13/186 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD ++ + +++ F G +++ V +D +GYGFV F +EE A+ +I+ +N
Sbjct: 93 FIKNLDKKIDNKAMYDTFSAFGNILSCKVAQDE-KGQSKGYGFVHFETEESANTSIEKVN 151
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + S+ ++ ++G N+++ N D+ E+ L D F FG I +
Sbjct: 152 GMLLNEKKVYVGRFISRKEREKELGEKAKLFTNVYVKNFGEDLTEEALRDMFEKFGPITS 211
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
+ + +D G SRGFGF++++ E ++ A++ +NG+ L + ++ Y + K ER
Sbjct: 212 HRVMTKD---GKSRGFGFVAFEKPEDAEEAVQKLNGKELSDGKVL--YVGRAQKKNERQM 266
Query: 201 TPAERI 206
R
Sbjct: 267 ELKRRF 272
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 104/187 (55%), Gaps = 25/187 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV-PKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N +TEE L ++F + GP+ + V KD + +G+GFV F EDA+ A++ L
Sbjct: 186 YVKNFGEDLTEEALRDMFEKFGPITSHRVMTKDGKS---RGFGFVAFEKPEDAEEAVQKL 242
Query: 87 NMIKLY-GKPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKLL 128
N +L GK + V +A ++++ +++ G NL++ NLD +D++ L
Sbjct: 243 NGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDERL 302
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
F+ +G I T+ K+M D G S+GFGF+ + + + + A+ MNG+ + ++ + V+
Sbjct: 303 RKEFAPYGTI-TSAKVM--LDEGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVAL 359
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 360 AQRKEER 366
>gi|62751624|ref|NP_001015753.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
gi|58476781|gb|AAH89689.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
Length = 217
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 105/165 (63%), Gaps = 8/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D S+G+ F+ +++ +A+D AIE MNG L +R++ V
Sbjct: 129 KVV---CDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFV 170
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L++ F G +++ V D N +GY FV F +++ AD AI+ +
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQDAADRAIEKM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGV 137
N + L + + V + + ++ ++GA N++I N D+D++ L +TFS +G
Sbjct: 159 NGMLLNDRKVFVGRFKCRREREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGC 216
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 105/181 (58%), Gaps = 4/181 (2%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVGNL P VT+ +L E+F G V + + KD++T L GYGFV+F AD A++ LN
Sbjct: 25 YVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAADMALQSLN 84
Query: 88 MIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
L+G+ +RVN A Q + D + +F+G+L D+++KLL + F + G + ++M
Sbjct: 85 GRVLHGQELRVNWAFQKDQREDSASQFQIFVGDLASDINDKLLCEAFQSCG--CADARVM 142
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAER 205
D +TG S+G+GF+S+ + ++ A+ M+G L +R+I +A K + +R
Sbjct: 143 WDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQHKQENSQASFAAVDR 202
Query: 206 I 206
+
Sbjct: 203 V 203
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 27/188 (14%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L + ++LL E F Q+ + V D T +GYGFV F++ DA+ A+ ++
Sbjct: 114 FVGDLASDINDKLLCEAF-QSCGCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMS 172
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-------------------ANLFIGNLDPDVDEKLL 128
L + IR A +++ AN+++GNL PDV + L
Sbjct: 173 GTMLGSRRIRCGWAQHKQENSQASFAAVDRVSTLSRAQADPENANVYVGNLAPDVSDAEL 232
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
S FG ++ + KI R G+ F + S + AI ++GQ L + + S+
Sbjct: 233 QTAVSQFGAVL-DVKIYRKG------GYAFAQFASHADAVRAIVGLSGQNLGGKALKCSW 285
Query: 189 AYKKDTKG 196
+ KG
Sbjct: 286 GRHQARKG 293
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
++A YVGNL P V++ L Q G V++V + + GY F +F S DA A
Sbjct: 214 ENANVYVGNLAPDVSDAELQTAVSQFGAVLDVKIYRK------GGYAFAQFASHADAVRA 267
Query: 83 IKVLNMIKLYGKPIRVN 99
I L+ L GK ++ +
Sbjct: 268 IVGLSGQNLGGKALKCS 284
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ Y G+LDP+VTE L++LF VV+V V +D+ GY ++ F + DA A+
Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAM 106
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN L+ +PIR+ +++D L N+FI NLD +D K L++TFS+FG I++
Sbjct: 107 EALNYTPLFERPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILS-C 165
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D TG S+G+GF+ ++ E++ AAI+ +NG + ++Q+ V + ++ + TP
Sbjct: 166 KVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTP 224
Query: 203 AERI 206
R
Sbjct: 225 TPRF 228
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 12/188 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L+E F G +++ V D VT +GYGFV+F EE A AI LN
Sbjct: 139 FIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ + K + V + +++ D N+++ NL ++ E L TF FGVI +
Sbjct: 198 GMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI-S 256
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ +MRD +GNSR FGF++++ EA+ +A+E MNG L + + V A KK + E R
Sbjct: 257 SAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELR 315
Query: 199 HGTPAERI 206
ERI
Sbjct: 316 RKFEQERI 323
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 20/188 (10%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV NL ++ E+ L + F + G + + V +D+ N + +GFV F E A A++
Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVE 287
Query: 85 VLNMIKLYGKPI---RVNKASQDKKSL--------------DVGANLFIGNLDPDVDEKL 127
+N I L + R K S+ ++ L GANL++ NLD VD++
Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEK 347
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + FS +G VT+ K+M +P G SRGFGF++Y + E + A+ MNG+ + + + ++
Sbjct: 348 LKEMFSEYGN-VTSSKVMLNPQ-GLSRGFGFVAYSNPEEALRALSEMNGKMIGKKPLYIA 405
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 406 LAQRKEDR 413
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN---LHQGYGFVEFRSE 76
E++Q A Y+ NLD V +E L E+F + G V + V + N L +G+GFV + +
Sbjct: 327 EKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKV----MLNPQGLSRGFGFVAYSNP 382
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ + A +D+++
Sbjct: 383 EEALRALSEMNGKMIGKKPLYIALAQRKEDRRA 415
>gi|449486336|ref|XP_004177123.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Taeniopygia guttata]
Length = 167
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 103/163 (63%), Gaps = 8/163 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 10 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALD 69
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 70 TMNFEVIKGRPIRIMWSQRDPGLRKS-GVG-NVFIKNLDDSIDNKALYDTFSAFGNILSC 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
+ D SRG+GF+ +++ EA+ AIE MNG L +R++
Sbjct: 128 KVVC---DENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKV 167
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 52 ASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADGERALE 111
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 112 QLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDDAIDNKALHDTFAAFGNVLS-CK 170
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D + G S+G+GF+ Y++ EA+++AI+A+NG L ++++ V + KKD + +
Sbjct: 171 VATD-EMGRSKGYGFVHYETNEAAESAIKAVNGMLLNDKKVYVGHHVSKKDRQAK 224
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 20/193 (10%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++ Q YV N+DP+ ++ ELF G V + + +D +G+GFV F + E+A
Sbjct: 228 QKKQFTNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDE-EGRSRGFGFVNFETHEEA 286
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPD 122
A+ L+ G+ + V++A + +K S G NL+I NL+ D
Sbjct: 287 QKAVDTLHDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDD 346
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
VD++ L D F FG I T+ K+MR + G S+GFGF+ + S + + A+ MN + + ++
Sbjct: 347 VDDEKLRDAFEPFGAI-TSAKVMR-TEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGSK 404
Query: 183 QITVSYAYKKDTK 195
+ VS A +++ +
Sbjct: 405 PLYVSLAQRREVR 417
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ Y+G+L P+V E L+E+F GPV ++ V +D VT GY +V + DA+ A+
Sbjct: 9 ASLYIGDLLPEVNEGFLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQVADAERALD 68
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N ++ GKP R+ + +D + VG N+F+ NL +D K LYDTFS FG I++
Sbjct: 69 SMNFTEIKGKPCRIMWSQRDPSMRRSGVG-NIFVKNLHEGIDNKQLYDTFSLFGNILS-C 126
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K++ D TG S+G+G++ Y++ EA+ +AIE ++G + +++ V ++D +
Sbjct: 127 KVVTDKATGLSKGYGYVHYETNEAAASAIEKLDGMLIDGKEVQVGVFMRRDNR 179
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 29/194 (14%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV--------------- 71
++ N+ + TE+ L E F G VV+ PK+ +L G+GFV
Sbjct: 188 VFIKNIPFEWTEDKLREEFEGFGEVVSAK-PKEVQGSL--GFGFVNFATHEAAAAAVKEM 244
Query: 72 ---EFRSEEDADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDV-----GANLFIGNLDP 121
EF ED + KVL + + K R +A + + +D G NL++ NLD
Sbjct: 245 NDKEFTVTEDGEEVTKVLFVGRAQKKAERERELRAKYEAEKIDRIAKFQGVNLYVKNLDD 304
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
V + +L D FSA G I T+ ++M+D TG SRGFGF+ Y + E + A+ MNG+ +
Sbjct: 305 TVTDDVLRDEFSAMGTI-TSARVMKDLKTGISRGFGFVCYSTPEDATRAVNEMNGKIILG 363
Query: 182 RQITVSYAYKKDTK 195
+ I V+ A ++D +
Sbjct: 364 KPIFVALAQRRDVR 377
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 23/186 (12%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NL + + L++ F G +++ V D+ T L +GYG+V + + E
Sbjct: 90 SMRRSGVGNIFVKNLHEGIDNKQLYDTFSLFGNILSCKVVTDKATGLSKGYGYVHYETNE 149
Query: 78 DADYAIKVLNMIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
A AI+ L+ + + GK ++V N+ Q + N+FI N+ + E L +
Sbjct: 150 AAASAIEKLDGMLIDGKEVQVGVFMRRDNRPGQADWT-----NVFIKNIPFEWTEDKLRE 204
Query: 131 TFSAFGVIVT-NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG +V+ PK + S GFGF+++ + EA+ AA++ MN +++ TV+
Sbjct: 205 EFEGFGEVVSAKPK-----EVQGSLGFGFVNFATHEAAAAAVKEMN-----DKEFTVTED 254
Query: 190 YKKDTK 195
++ TK
Sbjct: 255 GEEVTK 260
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q YV NLD VT+++L + F G + + V KD T + +G+GFV + + EDA A
Sbjct: 293 QGVNLYVKNLDDTVTDDVLRDEFSAMGTITSARVMKDLKTGISRGFGFVCYSTPEDATRA 352
Query: 83 IKVLNMIKLYGKPIRV 98
+ +N + GKPI V
Sbjct: 353 VNEMNGKIILGKPIFV 368
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ V + L++LF Q G VV+V V +D T GYG+V + + +DA A+ V
Sbjct: 31 SLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 90
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L GKPIR+ + +D G N+FI NLD +D K L+DTFSAFG I++ K+
Sbjct: 91 LNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILS-CKV 149
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D +G S+G GF+ +DS EA+ AI+ +NG L ++Q+ V
Sbjct: 150 ATDA-SGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFV 190
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V N+ +TEE L +F + GP+ +V V +D + +GFV F + +DA +++ L
Sbjct: 211 VFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDG-DGKSKCFGFVNFENVDDAAMSVEAL 269
Query: 87 NMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLDPDVDEKLLY 129
N K K V KA + K+++D GANL+I NLD + + L
Sbjct: 270 NGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDDKLK 329
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ FG I T+ K+MRDP+ G SRG GF+++ S E + A+ MN + + ++ + V+ A
Sbjct: 330 ELFAQFGTI-TSCKVMRDPN-GLSRGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVALA 387
Query: 190 YKKDTKGER 198
+K+ + R
Sbjct: 388 QRKEDRRAR 396
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + + L + F G +++ V D + + +G+GFV+F SEE
Sbjct: 111 SIRKSGTGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATD-ASGMSKGHGFVQFDSEE 169
Query: 78 DADYAIKVLNMIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLY 129
A AI LN + L K + V +++ +K+ + N+F+ N+ + E+ L
Sbjct: 170 AAQKAIDKLNGMLLNDKQVFVGPFVRKQERESTINKEKFN---NVFVKNISEGMTEEDLT 226
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG I T+ +MRD D G S+ FGF+++++ + + ++EA+NGQ +++ V A
Sbjct: 227 RIFGEFGPI-TSVVVMRDGD-GKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKA 284
Query: 190 YKKDTK 195
KK +
Sbjct: 285 QKKSER 290
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ Q A Y+ NLD + ++ L ELF Q G + + V +D L +G GFV F S
Sbjct: 303 KEAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDP-NGLSRGSGFVAFSS 361
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ V A +D+++
Sbjct: 362 PEEASRALAEMNSKMVVSKPLYVALAQRKEDRRA 395
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 109/182 (59%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L++ F AG ++++ V +D +T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAECALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI N+D +D K LYDTFSAFG I++
Sbjct: 71 TMNYEVIKGRPIRIMWSQRDPGLRKS-GVG-NIFIKNMDESIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + + + G
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREAEMGA 185
Query: 202 PA 203
A
Sbjct: 186 KA 187
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + E L +F + G ++V V D +G+GFV F + DA A+ +
Sbjct: 193 VYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDE-RGRSRGFGFVNFVNHGDARRAVTEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L G+ + V +A Q++ G NL++ NLD +D++ L
Sbjct: 252 NGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ +G I T+ K+M D G+SRGFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFAPYGTI-TSAKVM--TDGGHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 98/178 (55%), Gaps = 12/178 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ N+D + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNMDESIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAANRAIETMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N++I N D+D + L + F+ FG ++
Sbjct: 160 GMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 197
+M D + G SRGFGF+++ + + A+ MNG+ L R + V A K+ + +GE
Sbjct: 220 -VCVMTD-ERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGE 275
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q +R Q YV NLD + +E L + F G + + V D +G+GFV F
Sbjct: 283 IKQERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTD--GGHSRGFGFVCF 340
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL 119
S E+A A+ +N + KP+ V A + ++ + N +I L
Sbjct: 341 SSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYIQRL 386
>gi|293351002|ref|XP_001054954.2| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 438
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E F AGP++++ + +D+VT GY +V ++ DA A++
Sbjct: 240 ASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALE 299
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++
Sbjct: 300 TMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 359
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGER 198
D +G+GF+ + E+++ AI+A+NG +L R+I V + K+ + ER
Sbjct: 360 AC---DEKGPKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAER 412
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 112/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 129 KVV---CDDHGSRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGH-FK--SRQEREAE 182
Query: 202 PAERILAANN 211
R + N
Sbjct: 183 LGARAMEFTN 192
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCD--DHGSRGFGFVHFETHEAAQLAISTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAF----- 135
+ L + + V S+ ++ ++GA N+++ NL D+DE L + FS F
Sbjct: 160 GMLLNDRKVFVGHFKSRQEREAELGARAMEFTNIYVKNLQVDMDEWGLQELFSQFDWSSP 219
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
G +++ K+MRD D+G+SRGFGF++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 GKMLS-VKVMRD-DSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKR 274
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 28/192 (14%)
Query: 28 YVGNLDPQVTEELLWELFVQA-----GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
YV NL + E L ELF Q G +++V V +D + +G+GFV F E+A A
Sbjct: 194 YVKNLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKA 252
Query: 83 IKVLNMIKLYGKPIRVNKA-------SQDKKSLD------------VGANLFIGNLDPDV 123
+ +N ++ G+ + V +A ++ K+ + G NL++ NLD +
Sbjct: 253 VMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMKQDRLNRYHVRGVNLYVKNLDDSI 312
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
+++ L FS +G+I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 313 NDEKLRKEFSPYGMI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKP 369
Query: 184 ITVSYAYKKDTK 195
+ V+ A +K+ +
Sbjct: 370 LYVALAQRKEER 381
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+LDP V E L +LF Q PV N+ V +D +T+ GY +V F + EDA A+
Sbjct: 58 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAM 116
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN + +PIR+ +++D L N+FI NLD +D K LY+TFS+FG I++
Sbjct: 117 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILS-C 175
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ D G S+G+GF+ ++ E + AAI+ +NG L ++Q+ V + ++ +
Sbjct: 176 KVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 227
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
++ NLD + + L+E F G +++ V D V +GYGFV+F EE A AI
Sbjct: 147 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 205
Query: 86 LNMIKLYGKPIRVNK--ASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTFSAFGVI 138
LN + L K + V QD+ + GA N+++ NL ++ + L TF +G I
Sbjct: 206 LNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI 265
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE- 197
++ +M+D +GNSR FGF+++ S EA+ A+E MNG L + V A KK + E
Sbjct: 266 -SSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEE 323
Query: 198 -RHGTPAERI 206
R ERI
Sbjct: 324 LRRKFEQERI 333
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL ++T++ L + F + G + + V KD+ N + +GFV F S E A A++
Sbjct: 240 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEK 298
Query: 86 LNMIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKL 127
+N I L G+ + R K S ++ L G+NL++ NLD V+++
Sbjct: 299 MNGISL-GEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEK 357
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + FS +G VT+ K+M + G SRGFGF++Y + E + A++ MNG+ + + + V+
Sbjct: 358 LKEMFSEYGN-VTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVA 415
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 416 LAQRKEER 423
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q + Y+ NLD V +E L E+F + G V + V + L +G+GFV + + E+A
Sbjct: 337 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEEA 395
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+K +N + KP+ V A + ++
Sbjct: 396 LLAMKEMNGKMIGRKPLYVALAQRKEE 422
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+LDP V E L +LF Q PV V V +D +T GY +V F + EDA A+
Sbjct: 57 NSSLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRD-LTRRSLGYAYVNFANPEDASRAM 115
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN + +PIR+ +++D L N+FI NLDP +D K LY+TFSAFG I++
Sbjct: 116 DSLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILS-C 174
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ D G S+G+GF+ ++ E + AAI+ +NG L ++Q+ V + ++ +
Sbjct: 175 KVAMDA-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 226
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 12/190 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
++ NLDP + + L+E F G +++ V D V +GYGFV+F EE A AI
Sbjct: 146 NVFIKNLDPSIDNKALYETFSAFGTILSCKVAMDAVGR-SKGYGFVQFEKEETAQAAIDK 204
Query: 86 LNMIKLYGKPIRVNK--ASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTFSAFGVI 138
LN + L K + V QD+ + GA N+++ NL ++ + L TF +G I
Sbjct: 205 LNGMLLNDKQVFVGHFVRRQDRSRSESGAVPRFTNVYVKNLPKEITDDELKKTFGKYGDI 264
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE- 197
++ +M+D +GNSR FGF++++S EA+ A+E MNG L + V A KK + E
Sbjct: 265 -SSAVVMKD-QSGNSRSFGFVNFESPEAAAVAVEKMNGISLGEDVLYVGRAQKKSEREEE 322
Query: 198 -RHGTPAERI 206
R ERI
Sbjct: 323 LRRKFEQERI 332
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 22/189 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV NL ++T++ L + F + G + + V KD+ N + +GFV F S E A A++
Sbjct: 238 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFESPEAAAVAVE 296
Query: 85 VLNMIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEK 126
+N I L G+ + R K S+ ++ L G+NL++ NLD V+++
Sbjct: 297 KMNGISL-GEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDE 355
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + FS +G VT+ K+M + G SRGFGF++Y S E + A+ MNG+ + + + V
Sbjct: 356 KLKEMFSEYGN-VTSCKVMMNSQ-GLSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYV 413
Query: 187 SYAYKKDTK 195
++A +K+ +
Sbjct: 414 AFAQRKEER 422
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q + Y+ NLD V +E L E+F + G V + V + L +G+GFV + S E+A
Sbjct: 336 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSSPEEA 394
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+ +N + KP+ V A + ++
Sbjct: 395 SRALSEMNGKMIGRKPLYVAFAQRKEE 421
>gi|340375830|ref|XP_003386437.1| PREDICTED: polyadenylate-binding protein 1-like [Amphimedon
queenslandica]
Length = 618
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L P V E +L+E F +AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 16 SLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAYVNFQQPADAERALDT 75
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
+N + G+P R+ + +D G N+FI NLD +D K LYDTFSAFG I++ K+
Sbjct: 76 MNYEPIKGQPCRIMWSQRDPSLRRSGVGNIFIKNLDKSIDHKALYDTFSAFGNILS-CKV 134
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D + +S+GFGF+ +D EA+D AIE +NG+ L + ++ V
Sbjct: 135 ATDGNR-HSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKVYV 175
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH-QGYGFVEFRSE 76
S R+ ++ NLD + + L++ F G +++ V D N H +G+GFV F +
Sbjct: 96 SLRRSGVGNIFIKNLDKSIDHKALYDTFSAFGNILSCKVATD--GNRHSKGFGFVHFDEQ 153
Query: 77 EDADYAI-----KVLNMIKLY-GKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
E AD AI K+LN +K+Y GK I S N+FI N D + +LYD
Sbjct: 154 EAADLAIEKVNGKLLNDMKVYVGKFIPRKDRSHTNGFNQHYTNVFIKNFGEDFTDTMLYD 213
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F +G IV+ +M+D + G S+GFGF+S++S EA+ AA++A++ + RQ+ A
Sbjct: 214 VFEKYGSIVS-AVVMKDGE-GLSKGFGFVSFESHEAASAAVQAVHNSIVNGRQVYCGRAQ 271
Query: 191 KKDTK 195
KK+ +
Sbjct: 272 KKNER 276
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 21/197 (10%)
Query: 17 HSAERNQDAT-AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
H+ NQ T ++ N T+ +L+++F + G +V+ V KD L +G+GFV F S
Sbjct: 186 HTNGFNQHYTNVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDG-EGLSKGFGFVSFES 244
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGN 118
E A A++ ++ + G+ + +A Q++ S G NL+I N
Sbjct: 245 HEAASAAVQAVHNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLSRYQGVNLYIKN 304
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
L+ + E+ L FS FG I T+ KIM D + G+S+GFGF+ + S E + A+ MNG+
Sbjct: 305 LEDTLGEEKLKSEFSKFGSI-TSAKIMTD-EFGHSKGFGFVCFSSPEEATKAVTEMNGRI 362
Query: 179 LCNRQITVSYAYKKDTK 195
+ ++ + V+ A +K+ +
Sbjct: 363 VVSKPLYVALAQRKEER 379
>gi|410078732|ref|XP_003956947.1| hypothetical protein KAFR_0D01660 [Kazachstania africana CBS 2517]
gi|372463532|emb|CCF57812.1| hypothetical protein KAFR_0D01660 [Kazachstania africana CBS 2517]
Length = 212
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 114/204 (55%), Gaps = 25/204 (12%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
++ T YVGN+DP+V +E L+ELFVQ G + + P+D+V + HQGY F+EF ++ DY
Sbjct: 5 KERTVYVGNIDPRVNKEDLYELFVQFGRIKKINYPRDKVLDTHQGYAFIEFLNDSTVDYV 64
Query: 83 IKVL---NMIKLYGKPIRVNKASQDK--------KSLDVG----ANLFIGNLDPDVDEKL 127
+K+ N++ LY + +++ K+ K K++DV A + + N+D VD
Sbjct: 65 LKLFGNTNLVSLYERSLKIRKSENGKEANANGTNKNIDVDMLPIAKIIVKNVDESVDIMK 124
Query: 128 LYDTFSAFGVIVTNPKIMRDPDT---GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
L S FG K+ RD D N GF+ + ++ SD AI+ +N + + N++I
Sbjct: 125 LNKICSKFG------KLARDSDIVTMSNGMRCGFVHFRDYKDSDLAIDKLNNELIVNKRI 178
Query: 185 TVSYAYKKDTKGE-RHGTPAERIL 207
+V YA K + G ++GT +R+L
Sbjct: 179 SVEYALKGNAMGNTKYGTDTDRLL 202
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 95/162 (58%), Gaps = 4/162 (2%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A + + A+ YVG+LD +VTE+ L+ F AGPV+++ + +D +T GY +V F D
Sbjct: 142 AAKYRQASLYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLAD 201
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGV 137
A A+ +N L G+P+R+ + +D G N+FI NLD VD+K L++ FSAFG
Sbjct: 202 AQRALDTMNFDVLRGRPLRLMWSQRDAHLRKSGVGNVFIKNLDRSVDDKALFERFSAFGK 261
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
I+++ + D SRG+ F+ + A+D AIE MNG L
Sbjct: 262 ILSSKVV---SDERGSRGYAFVHFQEQSAADRAIEHMNGAQL 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N ++ + L +F + G ++V V D + +G+GFV F S E A A++ LN
Sbjct: 331 YIKNFGGRMDDARLRAVFSEYGKTLSVKVMTD-ASGRSRGFGFVSFESHEAARRAVEALN 389
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+P+ V +A QD GA L++ NLD VDE L
Sbjct: 390 GRQVDGQPLFVGRAQRKAERQAELRRAFEQRQQDGLRRAQGAKLYVKNLDDAVDEDRLRR 449
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG V+ KIMR+ G S+GFG I + S + + A+ MNG+ L ++ ++++ A
Sbjct: 450 EFSGFGA-VSRVKIMREE--GRSKGFGLICFSSADEAARALAEMNGRVLGSKPLSIALAQ 506
Query: 191 KKDT 194
+
Sbjct: 507 SRRC 510
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 11/175 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD V ++ L+E F G +++ V D + +GY FV F+ + AD AI+ +N
Sbjct: 239 FIKNLDRSVDDKALFERFSAFGKILSSKVVSDERGS--RGYAFVHFQEQSAADRAIEHMN 296
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+L G + V + S+ + ++ + NL+I N +D+ L FS +G ++
Sbjct: 297 GAQLRGCRLFVGRFQSRQAREAELRSRAGEFTNLYIKNFGGRMDDARLRAVFSEYGKTLS 356
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+M D +G SRGFGF+S++S EA+ A+EA+NG+ + + + V A +K +
Sbjct: 357 -VKVMTDA-SGRSRGFGFVSFESHEAARRAVEALNGRQVDGQPLFVGRAQRKAER 409
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VTE L++LF Q G +V++ V +D + GYG+V + + DA A++
Sbjct: 29 TSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQALE 88
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN + GKPIR+ + +D GA N++I NLD +D K L+DTFSAFG I++ K
Sbjct: 89 VLNFTPVNGKPIRIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFGNILS-CK 147
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D G S G+GF+ +D+ E++ AI+ +NG L ++Q+ V
Sbjct: 148 VATDS-AGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYV 189
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 13 LLGQHSAERNQDAT----AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGY 68
L + E D T YV NL TEE L ++F + G + + V +D + +
Sbjct: 192 FLRRQERESGTDKTKFNNVYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDG-DGKSRCF 250
Query: 69 GFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--G 111
GFV F + +DA +++ LN K V KA + K+++D G
Sbjct: 251 GFVNFENPDDAARSVEALNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEG 310
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
NL++ NLD + + L + FS FG I T+ K+MRDP+ G S+G GF++Y + E + A+
Sbjct: 311 LNLYVKNLDDSITDDKLKELFSEFGTI-TSCKVMRDPN-GVSKGSGFVAYSTAEEASKAL 368
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGER 198
MNG+ + ++ + V+ A +K+ + R
Sbjct: 369 TEMNGKMIVSKPLYVALAQRKEERRAR 395
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+L+ +V E LYD F+ G IV+ ++ RD + S G+G+++Y++ +
Sbjct: 27 VSTSLYVGDLEQNVTETQLYDLFNQLGQIVS-IRVCRDLTSRRSLGYGYVNYNNVHDAAQ 85
Query: 170 AIEAMNGQYLCNRQITVSYAYK 191
A+E +N + + I + Y+Y+
Sbjct: 86 ALEVLNFTPVNGKPIRIMYSYR 107
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 109/182 (59%), Gaps = 8/182 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L++ F AG ++++ V +D +T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAECALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI N+D +D K LYDTFSAFG I++
Sbjct: 71 TMNYEVIKGRPIRIMWSQRDPGLRKS-GVG-NIFIKNMDESIDNKALYDTFSAFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D S+G+GF+ +++ EA++ AIE MNG L +R++ V + + + G
Sbjct: 129 KVVC---DENGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKEREAEMGA 185
Query: 202 PA 203
A
Sbjct: 186 KA 187
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + E L +F + G ++V V D +G+GFV F + DA A+ +
Sbjct: 193 VYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDE-RGRSRGFGFVNFVNHGDARRAVTEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L G+ + V +A Q++ G NL++ NLD +D++ L
Sbjct: 252 NGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ +G I T+ K+M D G+SRGFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFAPYGTI-TSAKVM--TDGGHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 98/178 (55%), Gaps = 12/178 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ N+D + + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 102 FIKNMDESIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAANRAIETMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N++I N D+D + L + F+ FG ++
Sbjct: 160 GMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 197
+M D + G SRGFGF+++ + + A+ MNG+ L R + V A K+ + +GE
Sbjct: 220 -VCVMTD-ERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGE 275
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q +R Q YV NLD + +E L + F G + + V D +G+GFV F
Sbjct: 283 IKQERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTD--GGHSRGFGFVCF 340
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL 119
S E+A A+ +N + KP+ V A + ++ + N +I L
Sbjct: 341 SSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYIQRL 386
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+LDP VTE L+E+F GPV ++ V +D +T GY +V F + DA+ A+
Sbjct: 24 ASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERALD 83
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN ++ GK R+ +D GA N+FI NLD VD + L+DTFS FG I++ K
Sbjct: 84 TLNYTQIKGKACRIMWKHRDPSIRKSGAGNIFIKNLDKTVDTRTLHDTFSQFGNILS-CK 142
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS----YAYKKDTKGERH 199
+ D + NSRGFGF+ +++ E ++ AI +NG L ++++ V ++ T GER
Sbjct: 143 VSMD-EHANSRGFGFVQFETAEEANEAISKVNGMLLEDKRLFVGPFIPRGERESTNGERR 201
Query: 200 GT 201
T
Sbjct: 202 FT 203
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 22/183 (12%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N V+++ + F + G + + + + + + +GFV F+ +DA +
Sbjct: 203 TNVYVKNFPDNVSDDDFRKSFERYGEITSCKIMR-KEDGTSKCFGFVNFKEADDAKKCCE 261
Query: 85 VLNMIKLYG--KPI---RVNKASQDKKSLDVG--------------ANLFIGNLDPDVDE 125
+N K +G + I R K S+ K+ L NL+I NLD +D+
Sbjct: 262 EMNGQKPFGGERDIYAGRAEKESERKEKLKKKYDQIRMERLKNNQLVNLYIKNLDDTIDD 321
Query: 126 KLLYDTFSAFGVIVTNPKIMRDPDT-GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
+ L TF FG I T+ K+MRD D S+GFGF+ + E + A+ AMNGQ + + I
Sbjct: 322 EKLRQTFEQFGTI-TSAKVMRDKDRPEVSKGFGFVCFAQPEEATRAVTAMNGQMVGTKPI 380
Query: 185 TVS 187
V+
Sbjct: 381 YVA 383
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT-NLHQGYGFVEFRSEEDAD 80
NQ Y+ NLD + +E L + F Q G + + V +D+ + +G+GFV F E+A
Sbjct: 305 NQLVNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPEEAT 364
Query: 81 YAIKVLNMIKLYGKPIRV 98
A+ +N + KPI V
Sbjct: 365 RAVTAMNGQMVGTKPIYV 382
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+LDP V E L +LF Q PV N+ V +D +T+ GY +V F + EDA A+
Sbjct: 44 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAM 102
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN + +PIR+ +++D L N+FI NLD +D K LY+TFS+FG I++
Sbjct: 103 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILS-C 161
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ D G S+G+GF+ ++ E + AAI+ +NG L ++Q+ V + ++ +
Sbjct: 162 KVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 213
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
++ NLD + + L+E F G +++ V D V +GYGFV+F EE A AI
Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 191
Query: 86 LNMIKLYGKPIRVNK--ASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTFSAFGVI 138
LN + L K + V QD+ + GA N+++ NL ++ + L TF +G I
Sbjct: 192 LNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI 251
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE- 197
++ +M+D +GNSR FGF+++ S EA+ A+E MNG L + V A KK + E
Sbjct: 252 -SSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEE 309
Query: 198 -RHGTPAERI 206
R ERI
Sbjct: 310 LRRKFEQERI 319
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 22/189 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV NL ++T++ L + F + G + + V KD+ N + +GFV F S E A A++
Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVE 283
Query: 85 VLNMIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEK 126
+N I L G+ + R K S ++ L G+NL++ NLD V+++
Sbjct: 284 KMNGISL-GEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDE 342
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + FS +G VT+ K+M + G SRGFGF++Y + E + A++ MNG+ + + + V
Sbjct: 343 KLKEMFSEYGN-VTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 400
Query: 187 SYAYKKDTK 195
+ A +K+ +
Sbjct: 401 ALAQRKEER 409
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q + Y+ NLD V +E L E+F + G V + V + L +G+GFV + + E+A
Sbjct: 323 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEEA 381
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+K +N + KP+ V A + ++
Sbjct: 382 LLAMKEMNGKMIGRKPLYVALAQRKEE 408
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VT+ L+ELF QAG VV+V V +D + GY +V + + DA A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L KPIRV +++D S G AN+FI NLD +D K L+DTFSAFG I++
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKV 241
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
M D G S+GFGF+ Y+ E++ +A++++NG + ++ + V
Sbjct: 242 AM--DDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYV 282
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 20/196 (10%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
+S+++ + +V NL T+E L ++F + G + + V + + +GFV F S
Sbjct: 293 NSSDKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIG-MDGKSRCFGFVNFESP 351
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGNL 119
+DA A++ LN K+ K V +A + ++ +D+ G NL++ NL
Sbjct: 352 DDAARAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNL 411
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D + + L + FS FG I T+ KIMRD + G S+G GF+S+ + E + A+ MNG+ +
Sbjct: 412 DDGITDDQLRELFSNFGKI-TSCKIMRDQN-GVSKGSGFVSFSTREEASQALTEMNGKMI 469
Query: 180 CNRQITVSYAYKKDTK 195
+ + V++A +K+ +
Sbjct: 470 SGKPLYVAFAQRKEER 485
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+L++G+L+ +V + LY+ FS G +V+ ++ RD ++ S G+ +++Y + + A+
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVS-VRVCRDVNSRRSLGYAYVNYSNPMDAARAM 180
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
EA+N L N+ I V Y+ +D R G+ I + K+ T A G
Sbjct: 181 EALNFAPLNNKPIRVMYS-NRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFG 234
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ VTE L++LF Q G VV++ V +D + GYG+V + + DA AI+
Sbjct: 29 TSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAIE 88
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN + GKPIR+ + +D G N++I NLD +D K L+DTFSAFG I++ K
Sbjct: 89 VLNFTPVNGKPIRIMYSYRDPTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFGSILS-CK 147
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D G S G+GF+ +D+ E++ AI+ +NG L ++Q+ V
Sbjct: 148 VATDS-LGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYV 189
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 152/352 (43%), Gaps = 67/352 (19%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL TEE L ++F + G + + V +D + +GFV F + +DA +++ L
Sbjct: 210 VYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDG-NGKSRCFGFVNFENPDDAAQSVEAL 268
Query: 87 NMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNLDPDVDEKLLY 129
N K V KA + K+++D G NL++ NLD + + L
Sbjct: 269 NGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVKNLDDSITDDKLK 328
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS FG I T+ K+MRDP+ G SRG GF+++ + E + A+ MNG+ + ++ + V+ A
Sbjct: 329 ELFSEFGTI-TSCKVMRDPN-GVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYVALA 386
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRP----------HTLF-ASGPPSLQNAPQANG 238
+K+ + R +I A P P H LF GPP++
Sbjct: 387 QRKEERRARLQAQYSQIRPAMAPPIGPRMPIYPPGTPGIGHQLFYGQGPPAI-------- 438
Query: 239 TVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQP 298
VPP+P G + +RP F PM GQ A + + G G QP
Sbjct: 439 -----VPPQP-GFGYQQQLVPGMRPN-------FFVPMVQPGQQAQRPSGRRSGAGAVQP 485
Query: 299 VMPPPMQ----------FRPPP--NMPPPPPPQLASAMQRPPPQPMGMGAQP 338
P PM +R PP +MP P L M P P MG P
Sbjct: 486 QQPLPMMQPQMLPRGRVYRYPPGRSMPDVPMAGLPGGM---LPVPYDMGGMP 534
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ Q YV NLD +T++ L ELF + G + + V +D + +G GFV F +
Sbjct: 302 KETVDKFQGLNLYVKNLDDSITDDKLKELFSEFGTITSCKVMRDP-NGVSRGSGFVAFST 360
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
E+A A+ +N + KP+ V A + ++
Sbjct: 361 AEEASRALTEMNGKMVVSKPLYVALAQRKEE 391
>gi|448115215|ref|XP_004202770.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359383638|emb|CCE79554.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 626
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 109/185 (58%), Gaps = 8/185 (4%)
Query: 15 GQHSAERNQ----DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
G+ +A+ Q A+ YVG L+P V E L+E+F G V ++ V +D VT GY +
Sbjct: 36 GEDAADSTQLPDTSASLYVGELNPSVNEASLFEIFSPVGQVSSIRVCRDAVTKKSLGYAY 95
Query: 71 VEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLY 129
V F ED + AI LN + G+P R+ + +D G N+FI NL P +D K L+
Sbjct: 96 VNFHKLEDGEKAIDDLNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALH 155
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SY 188
DTFSAFG I++ K+ D + GNS+ FGF+ Y++ EA+ AAIE +NG L +R++ V +
Sbjct: 156 DTFSAFGKILS-CKVATD-EQGNSKCFGFVHYETAEAARAAIENVNGMLLNDREVYVGKH 213
Query: 189 AYKKD 193
KKD
Sbjct: 214 VSKKD 218
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 62/291 (21%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G+H +++++++ YV N+D +EE + LF G + ++++ KD
Sbjct: 210 VGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEEMRNLFEPYGKITSLHLEKD-AEG 268
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------- 110
+G+GFV F S E A A++ LN + G+ + V +A + ++ ++
Sbjct: 269 KSKGFGFVNFESHEAAVKAVEELNDKDINGQNLYVGRAQKKRERIEELKRQYETARLEKL 328
Query: 111 ----GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
G NLF+ NLD +D L + F FG I T+ ++M D + G S+GFGF+ + S E
Sbjct: 329 SKYQGVNLFVKNLDDSIDSVKLEEEFKPFGTI-TSARVMVD-EHGKSKGFGFVCFSSPEE 386
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
+ AI MN + + + V+ A +KD R ++I A N
Sbjct: 387 ATKAITEMNQRMFHGKPLYVALAQRKDV---RRSQLEQQIQARNQ--------------- 428
Query: 227 PPSLQNAPQANGTVGGPVPPRPYA--------NGAASGPISAVRPPPPPPQ 269
+QNA G G +PP Y NG S P P P PQ
Sbjct: 429 -MRMQNAAATGGIPGQFIPPMFYGQQPGFFPPNGRGSAPF-----PGPNPQ 473
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 99/187 (52%), Gaps = 10/187 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S RN + ++ NL P + + L + F G +++ V D N + +GFV + + E
Sbjct: 131 SLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEQGN-SKCFGFVHYETAE 189
Query: 78 DADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYD 130
A AI+ +N + L + + V+K ++ K ++ AN +++ N+D E+ + +
Sbjct: 190 AARAAIENVNGMLLNDREVYVGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEEMRN 249
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F +G I T+ + +D + G S+GFGF++++S EA+ A+E +N + + + + V A
Sbjct: 250 LFEPYGKI-TSLHLEKDAE-GKSKGFGFVNFESHEAAVKAVEELNDKDINGQNLYVGRAQ 307
Query: 191 KKDTKGE 197
KK + E
Sbjct: 308 KKRERIE 314
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + DA+ A+
Sbjct: 172 NTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERAL 231
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN + K R+ + +D G N+FI NLD +D K L+DTF+AFG I++
Sbjct: 232 EQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILS-C 290
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D + G S+G+GF+ Y + E+++AAI+ +NG L ++ + V
Sbjct: 291 KVATD-EHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFV 333
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 22/196 (11%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R+Q Y+ NL + T E L E+F + GP+ + V D H+G+GFV + + E A
Sbjct: 350 RSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDE-HGKHRGFGFVNYENHESAS 408
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNLDPD 122
A+ L+ G + V +A Q + D G NL++ NLD +
Sbjct: 409 KAVDALHDKDYKGNVLYVARA-QKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDE 467
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
D++ L + F+ FG I T+ K+M+D + G S+GFGF+ + S + + A+ MNG+ L ++
Sbjct: 468 YDDEKLQNEFTPFGTI-TSCKVMKD-EKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSK 525
Query: 183 QITVSYAYKKDTKGER 198
+ VS A +K+ + ++
Sbjct: 526 PLYVSLAQRKEVRKQQ 541
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G LDP V E +LY+ FS G V + ++ RD T S G+ +++Y + ++ A+E
Sbjct: 174 SLYVGELDPTVTEAMLYEIFSMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADAERALE 232
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + N+ + ++ +
Sbjct: 233 QLNYSLIKNKACRIMWSQR 251
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ Y G+LDP+VTE L++LF VV+V V +D+ GY ++ F + DA A+
Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAM 106
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN L+ +PIR+ +++D L N+FI NLD +D K L++TFS+FG I++
Sbjct: 107 EALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILS-C 165
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D TG S+G+GF+ ++ E++ AAI+ +NG + ++Q+ V + ++ + TP
Sbjct: 166 KVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTP 224
Query: 203 AERI 206
R
Sbjct: 225 TPRF 228
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 12/188 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L+E F G +++ V D VT +GYGFV+F EE A AI LN
Sbjct: 139 FIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ + K + V + +++ D N+++ NL ++ E L TF FGVI +
Sbjct: 198 GMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI-S 256
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ +MRD +GNSR FGF++++ EA+ +A+E MNG L + + V A KK + E R
Sbjct: 257 SAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELR 315
Query: 199 HGTPAERI 206
ERI
Sbjct: 316 RKFEQERI 323
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 20/186 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL ++ E+ L + F + G + + V +D+ N + +GFV F E A A++ +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKM 289
Query: 87 NMIKLYGKPI---RVNKASQDKKSL--------------DVGANLFIGNLDPDVDEKLLY 129
N I L + R K S+ ++ L GANL++ NLD VD++ L
Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLK 349
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS +G VT+ K+M +P G SRGFGF++Y + E + A+ MNG+ + + + ++ A
Sbjct: 350 EMFSEYGN-VTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407
Query: 190 YKKDTK 195
+K+ +
Sbjct: 408 QRKEDR 413
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN---LHQGYGFVEFRSE 76
E++Q A Y+ NLD V +E L E+F + G V + V + N + +G+GFV + +
Sbjct: 327 EKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKV----MLNPQGMSRGFGFVAYSNP 382
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ + A +D+++
Sbjct: 383 EEALRALSEMNGKMIGRKPLYIALAQRKEDRRA 415
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 108/181 (59%), Gaps = 5/181 (2%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ Y G+L P VTE +L+E+F GPV ++ V +D VT GY ++ F + DA+ A
Sbjct: 46 QFASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 105
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN + G+P R+ + +D GA N+++ NLD ++D K LYDTFS FG I++
Sbjct: 106 LDTLNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILS- 164
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ PD G SRGFGF+ ++S E+++AAI +NG + + TV A K T GT
Sbjct: 165 CKVALTPD-GKSRGFGFVHFESDESAEAAIAKLNGMQIGEK--TVYVAPFKKTAERNDGT 221
Query: 202 P 202
P
Sbjct: 222 P 222
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 19/172 (11%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVP-----KDRVTNLHQGYGFVEFRS 75
R+ YV NLD + + L++ F G +++ V K R G+GFV F S
Sbjct: 132 RSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSR------GFGFVHFES 185
Query: 76 EEDADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDT 131
+E A+ AI LN +++ K + V A ++ + N++I ++ +E+ + +
Sbjct: 186 DESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGTPKNFTNVYIKHIPASWNEEKIKEE 245
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
F AFG I T+ + DP R F F++Y FE + AA+E M+G+ + N +
Sbjct: 246 FGAFGEI-TSLAVQTDP---KGRRFAFVNYAEFEQARAAVEEMDGKDVRNEE 293
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
NL++ NL DVD+ L F FG VT+ K+M D D G SRGFGF+ + + E + A+
Sbjct: 376 NLYVKNLGEDVDDAELKKMFEPFGT-VTSVKVMVD-DKGVSRGFGFVCFSTHEEATKAVT 433
Query: 173 AMNGQYLCNRQITVSYAYKKDTKGER 198
M+ + + + + V K++ + ER
Sbjct: 434 DMHLKLIGGKPLYVGMHEKREQRLER 459
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V + L ++F G V +V V D + +G+GFV F + E+A A+ ++
Sbjct: 378 YVKNLGEDVDDAELKKMFEPFGTVTSVKVMVDD-KGVSRGFGFVCFSTHEEATKAVTDMH 436
Query: 88 MIKLYGKPIRVNKASQDKKSLD 109
+ + GKP+ V + ++ L+
Sbjct: 437 LKLIGGKPLYVGMHEKREQRLE 458
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F+ AGP++++ V +D T Y ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + ++ ER
Sbjct: 129 KVVC---DEHGSRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHF---KSRREREAE 182
Query: 202 PAERILAANN 211
R + N
Sbjct: 183 LRARAMEFTN 192
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 38/258 (14%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH-QGYGFVEFRSEEDADYAIKVL 86
YV NL + E+ L +LF Q G +++V V KD N H +G+GFV F E+A A+ +
Sbjct: 194 YVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKD--NNGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 252 NGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDDSIDDEKLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 312 KEFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALA 368
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPY 249
+K+ ER +N Q R T+ A G P L ++ Q P P+P
Sbjct: 369 QRKE----------ERRAILSNQYMQ--RLSTMRALGVPLLGSSQQPTSYF-LPAMPQPP 415
Query: 250 ANGA--ASGPISAVRPPP 265
A A SG ++ ++P P
Sbjct: 416 ARAAYYGSGSVATIQPAP 433
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQQAISTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++ A N+++ NL D+DE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELRARAMEFTNIYVKNLQVDMDEQGLQDLFSQFGKLLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M+D + G+SRGFGF++++ E + A+ MNG+ + RQ+ V A K+
Sbjct: 220 -VKVMKD-NNGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRQLYVGRAQKR 269
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 106/173 (61%), Gaps = 4/173 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+LDP V E L +LF Q PV N+ V +D +T+ GY +V F + EDA A+
Sbjct: 44 NSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAM 102
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN + +PIR+ +++D L N+FI NLD +D K LY+TFS+FG I++
Sbjct: 103 ESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILS-C 161
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ D G S+G+GF+ ++ E + AAI+ +NG L ++Q+ V + ++ +
Sbjct: 162 KVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 213
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
++ NLD + + L+E F G +++ V D V +GYGFV+F EE A AI
Sbjct: 133 NVFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDK 191
Query: 86 LNMIKLYGKPIRVNK--ASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTFSAFGVI 138
LN + L K + V QD+ + GA N+++ NL ++ + L TF +G I
Sbjct: 192 LNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI 251
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE- 197
++ +M+D +GNSR FGF+++ S EA+ A+E MNG L + V A KK + E
Sbjct: 252 -SSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEE 309
Query: 198 -RHGTPAERI 206
R ERI
Sbjct: 310 LRRKFEQERI 319
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 22/189 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV NL ++T++ L + F + G + + V KD+ N + +GFV F S E A A++
Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVE 283
Query: 85 VLNMIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEK 126
+N I L G+ + R K S ++ L G+NL++ NLD V+++
Sbjct: 284 KMNGISL-GEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDE 342
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + FS +G VT+ K+M + G SRGFGF++Y + E + A++ MNG+ + + + V
Sbjct: 343 KLKEMFSEYGN-VTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV 400
Query: 187 SYAYKKDTK 195
+ A +K+ +
Sbjct: 401 ALAQRKEER 409
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q + Y+ NLD V +E L E+F + G V + V + L +G+GFV + + E+A
Sbjct: 323 EKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEEA 381
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
A+K +N + KP+ V A + ++
Sbjct: 382 LLAMKEMNGKMIGRKPLYVALAQRKEE 408
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 128 CKVA--CDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH-FK--SRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 109/171 (63%), Gaps = 9/171 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADYAIK 84
YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+ A+ A++
Sbjct: 19 YVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYLDMRAAETALQ 76
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN +++ IRVN A Q +++ + N +F+G+L P+V++ +L FSAFG + ++
Sbjct: 77 TLNGRRIFDTEIRVNWAYQGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTL-SD 135
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 136 ARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 186
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + +VG+L P+V +++L + F G + + V D + +GYGF+ FR
Sbjct: 98 QNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRD 157
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
+ DA+ AI +N L + IRVN A+Q +
Sbjct: 158 KTDAEQAIATMNGEWLGSRAIRVNWANQKTQ 188
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 244 NTTVYVGNLVPYCTQADLIPLFQTIGYLSEIRMQADR------GFAFVKLDTHEHAAMAI 297
Query: 84 KVLNMIKLYGKPIRVN 99
L ++G+PI+ +
Sbjct: 298 VQLQGQMVHGRPIKCS 313
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ Y G+LDP+VTE L++LF VV+V V +D+ GY ++ F + DA A+
Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAM 106
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN L+ +PIR+ +++D L N+FI NLD +D K L++TFS+FG I++
Sbjct: 107 EALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILS-C 165
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D TG S+G+GF+ ++ E++ AAI+ +NG + ++Q+ V + ++ + TP
Sbjct: 166 KVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTP 224
Query: 203 AERI 206
R
Sbjct: 225 TPRF 228
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 12/188 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L+E F G +++ V D VT +GYGFV+F EE A AI LN
Sbjct: 139 FIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ + K + V + +++ D N+++ NL ++ E L TF FGVI +
Sbjct: 198 GMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI-S 256
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ +MRD +GNSR FGF++++ EA+ +A+E MNG L + + V A KK + E R
Sbjct: 257 SAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELR 315
Query: 199 HGTPAERI 206
ERI
Sbjct: 316 RKFEQERI 323
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 20/186 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL ++ E+ L + F + G + + V +D+ N + +GFV F E A A++ +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKM 289
Query: 87 NMIKLYGKPI---RVNKASQDKKSL--------------DVGANLFIGNLDPDVDEKLLY 129
N I L + R K S+ ++ L GANL++ NLD VD++ L
Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLK 349
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS +G VT+ K+M +P G SRGFGF++Y + E + A+ MNG+ + + + ++ A
Sbjct: 350 EMFSEYGN-VTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407
Query: 190 YKKDTK 195
+K+ +
Sbjct: 408 QRKEDR 413
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN---LHQGYGFVEFRSE 76
E++Q A Y+ NLD V +E L E+F + G V + V + N + +G+GFV + +
Sbjct: 327 EKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKV----MLNPQGMSRGFGFVAYSNP 382
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ + A +D+++
Sbjct: 383 EEALRALSEMNGKMIGRKPLYIALAQRKEDRRA 415
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L V + L+++F Q G VV+V V +D + GY +V + ++ DA A+++
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ +++D S G N+FI NLD +D K LYDTF AFG I++ KI
Sbjct: 96 LNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILS-CKI 154
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTK 195
DP +G SRG+GF+ ++ E++ +AI+ +NG + ++++ V + K+D +
Sbjct: 155 ATDP-SGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRE 205
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ ++ NLD + + L++ F G +++ + D + +GYGFV+F +E
Sbjct: 116 SSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATD-PSGESRGYGFVQFEKDE 174
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVG---ANLFIGNLDPDVDEKLLYDTF 132
A AI LN + + K + V QD++++ +N+++ NL V + L + F
Sbjct: 175 SAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMF 234
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +MRD D G SR FGF+++++ +A+ A++ +NG+ ++++ V A KK
Sbjct: 235 GKYGTI-TSAVVMRDSD-GKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKK 292
Query: 193 DTK 195
+
Sbjct: 293 SER 295
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 101/188 (53%), Gaps = 20/188 (10%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YV NL VT++ L E+F + G + + V +D + +GFV F + + A A++
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDS-DGKSRCFGFVNFENADAAAQAVQ 272
Query: 85 VLNMIKLYGKPIRVNKASQ------------DKKSLDVG-----ANLFIGNLDPDVDEKL 127
LN K + V +A + +K +V NL++ NL+ ++D++
Sbjct: 273 ELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEK 332
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ +G I T+ K+MRD + G SRG GF+++ S E ++ A+ MNG+ + ++ + V+
Sbjct: 333 LRELFAEYGNI-TSCKVMRDSN-GVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVA 390
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 391 LAQRKEDR 398
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q AE+ Q+ Y+ NL+ + +E L ELF + G + + V +D + +G GFV F+S
Sbjct: 308 QEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDS-NGVSRGSGFVAFKS 366
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
EDA+ A+ +N + KP+ V A +D+K+
Sbjct: 367 AEDANRALTEMNGKMVGSKPLYVALAQRKEDRKA 400
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+L V + L+D FS G +V+ ++ RD ++ S G+ +++Y++ + A+E
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVS-VRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 173 AMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
+N + + I + Y+ +D + GT I + K+ T A G
Sbjct: 95 LLNFTPINGKPIRIMYS-NRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFG 147
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 108/181 (59%), Gaps = 5/181 (2%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ Y G+L P VTE +L+E+F GPV ++ V +D VT GY ++ F + DA+ A
Sbjct: 46 QFASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 105
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN + G+P R+ + +D GA N+++ NLD ++D K LYDTFS FG I++
Sbjct: 106 LDTLNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILS- 164
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ PD G SRGFGF+ ++S E+++AAI +NG + + TV A K T GT
Sbjct: 165 CKVALTPD-GKSRGFGFVHFESDESAEAAIAKLNGMQIGEK--TVYVAPFKKTAERNDGT 221
Query: 202 P 202
P
Sbjct: 222 P 222
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 19/172 (11%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVP-----KDRVTNLHQGYGFVEFRS 75
R+ YV NLD + + L++ F G +++ V K R G+GFV F S
Sbjct: 132 RSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSR------GFGFVHFES 185
Query: 76 EEDADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDT 131
+E A+ AI LN +++ K + V A ++ + N++I ++ +E+ + +
Sbjct: 186 DESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGTPKNFTNVYIKHIPASWNEEKIKEE 245
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
F AFG I T+ + DP R F F++Y FE + AA+E M+G+ + N +
Sbjct: 246 FGAFGEI-TSLAVQTDP---KGRRFAFVNYAEFEQARAAVEEMDGKDVRNEE 293
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
NL++ NL DVD+ L F FG VT+ K+M D D G SRGFGF+ + + E + A+
Sbjct: 376 NLYVKNLGEDVDDAELKKMFEPFGT-VTSVKVMVD-DKGVSRGFGFVCFSTHEEATKAVT 433
Query: 173 AMNGQYLCNRQITVSYAYKKDTKGER 198
M+ + + + + V K++ + ER
Sbjct: 434 DMHLKLIGGKPLYVGMHEKREQRLER 459
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V + L ++F G V +V V D + +G+GFV F + E+A A+ ++
Sbjct: 378 YVKNLGEDVDDAELKKMFEPFGTVTSVKVMVDD-KGVSRGFGFVCFSTHEEATKAVTDMH 436
Query: 88 MIKLYGKPIRVNKASQDKKSLD 109
+ + GKP+ V + ++ L+
Sbjct: 437 LKLIGGKPLYVGMHEKREQRLE 458
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 108/172 (62%), Gaps = 4/172 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L V + L+++F Q G VV+V V +D + GY +V + ++ DA A+++
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ +++D S G N+FI NLD +D K LYDTF AFG I++ KI
Sbjct: 96 LNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILS-CKI 154
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTK 195
DP +G SRG+GF+ ++ E++ +AI+ +NG + ++++ V + K+D +
Sbjct: 155 ATDP-SGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRE 205
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ ++ NLD + + L++ F G +++ + D + +GYGFV+F +E
Sbjct: 116 SSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKIATD-PSGESRGYGFVQFEKDE 174
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVG---ANLFIGNLDPDVDEKLLYDTF 132
A AI LN + + K + V QD++++ +N+++ NL V + L + F
Sbjct: 175 SAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSSNIKFSNVYVKNLSDTVTDDELKEMF 234
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +MRD D G SR FGF+++++ +A+ A++ +NG+ ++++ V A KK
Sbjct: 235 GKYGTI-TSAVVMRDSD-GKSRCFGFVNFENADAAAQAVQELNGKIFNDKELYVGRAQKK 292
Query: 193 DTK 195
+
Sbjct: 293 SER 295
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 20/188 (10%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YV NL VT++ L E+F + G + + V +D + +GFV F + + A A++
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDS-DGKSRCFGFVNFENADAAAQAVQ 272
Query: 85 VLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGNLDPDVDEKL 127
LN K + V +A + ++ +++ NL++ NL+ ++D++
Sbjct: 273 ELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEK 332
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ +G I T+ K+MRD + G SRG GF+++ S E ++ A+ MNG+ + ++ + V+
Sbjct: 333 LRELFAEYGNI-TSCKVMRDSN-GVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVA 390
Query: 188 YAYKKDTK 195
A +K+ +
Sbjct: 391 LAQRKEDR 398
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q AE+ Q+ Y+ NL+ + +E L ELF + G + + V +D + +G GFV F+S
Sbjct: 308 QEVAEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDS-NGVSRGSGFVAFKS 366
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
EDA+ A+ +N + KP+ V A +D+K+
Sbjct: 367 AEDANRALTEMNGKMVGSKPLYVALAQRKEDRKA 400
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+L V + L+D FS G +V+ ++ RD ++ S G+ +++Y++ + A+E
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVS-VRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 173 AMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
+N + + I + Y+ +D + GT I + K+ T A G
Sbjct: 95 LLNFTPINGKPIRIMYS-NRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFG 147
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ Y G+LDP+VTE L++LF VV+V V +D+ GY ++ F + DA A+
Sbjct: 48 NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAM 106
Query: 84 KVLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN L+ +PIR+ +++D L N+FI NLD +D K L++TFS+FG I++
Sbjct: 107 EALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILS-C 165
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D TG S+G+GF+ ++ E++ AAI+ +NG + ++Q+ V + ++ + TP
Sbjct: 166 KVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTP 224
Query: 203 AERI 206
R
Sbjct: 225 TPRF 228
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 12/188 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L+E F G +++ V D VT +GYGFV+F EE A AI LN
Sbjct: 139 FIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLN 197
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ + K + V + +++ D N+++ NL ++ E L TF FGVI +
Sbjct: 198 GMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI-S 256
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--R 198
+ +MRD +GNSR FGF++++ EA+ +A+E MNG L + + V A KK + E R
Sbjct: 257 SAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELR 315
Query: 199 HGTPAERI 206
ERI
Sbjct: 316 RKFEQERI 323
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 20/186 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL ++ E+ L + F + G + + V +D+ N + +GFV F E A A++ +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKM 289
Query: 87 NMIKLYGKPI---RVNKASQDKKSL--------------DVGANLFIGNLDPDVDEKLLY 129
N I L + R K S+ ++ L GANL++ NLD VD++ L
Sbjct: 290 NGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLK 349
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS +G VT+ K+M +P G SRGFGF++Y + E + A+ MNG+ + + + ++ A
Sbjct: 350 EMFSEYGN-VTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALA 407
Query: 190 YKKDTK 195
+K+ +
Sbjct: 408 QRKEDR 413
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN---LHQGYGFVEFRSE 76
E++Q A Y+ NLD V +E L E+F + G V + V + N + +G+GFV + +
Sbjct: 327 EKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKV----MLNPQGMSRGFGFVAYSNP 382
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
E+A A+ +N + KP+ + A +D+++
Sbjct: 383 EEALRALSEMNGKMIGRKPLYIALAQRKEDRRA 415
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 6/172 (3%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
HS + A+ YVG+L VTE +L+E F AGP++++ V +D VT GY +V F+
Sbjct: 37 HSTPNSPTASLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHR 96
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSA 134
A++ + +N+ + G PIR+ + +D ++ VG N+F+ NL+ +D K LYDTFS
Sbjct: 97 AHAEWVLATMNLDVIKGNPIRIMWSQRDPGQRKRGVG-NVFVKNLEKSIDNKALYDTFST 155
Query: 135 FGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
FG I++ I D S+G+GF+ +++ E++ AIE MNG L N ++ V
Sbjct: 156 FGRILSCKVI---SDENGSKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFV 204
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 103/183 (56%), Gaps = 14/183 (7%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V NL+ + + L++ F G +++ V D N +GYGFV F ++E A AI+ +
Sbjct: 135 VFVKNLEKSIDNKALYDTFSTFGRILSCKVISDE--NGSKGYGFVHFETQESAGKAIEKM 192
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + V + S+ ++ ++G N++I N ++D++ L + F+ +G +
Sbjct: 193 NGMLLNNLKVFVGRFKSRRERESELGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTL 252
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK---DTKG 196
+ K+M D D G S+GFGF+S+ S E + AA++ MNG+ L +QI V A KK T+
Sbjct: 253 S-VKVMTD-DCGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQKKRERQTEL 310
Query: 197 ERH 199
+RH
Sbjct: 311 KRH 313
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + ++ L E+F + GP ++V V D +G+GFV F+S EDA A+ +N
Sbjct: 228 YIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGR-SKGFGFVSFQSHEDAQAAVDDMN 286
Query: 88 MIKLYGKPIRVNKA--------------SQDKKSLDV---GANLFIGNLDPDVDEKLLYD 130
+L GK I V +A Q K++ + G NL+I NLD ++++ L
Sbjct: 287 GKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQGVNLYIKNLDDTINDEHLRK 346
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG I T+ K+M + G S+GFGF+ + S + + A MNG+ + ++ + VS A
Sbjct: 347 EFSPFGTI-TSAKVMME--NGRSKGFGFVCFSSSKDAAKASREMNGKLVASKPLYVSLAQ 403
Query: 191 KKDTK 195
+K+ +
Sbjct: 404 RKEER 408
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 106/171 (61%), Gaps = 9/171 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG--YGFVEFRSEEDADYAIKV 85
YVGNL P+VT+ +L E+F AGPVVN + +DR H G YGFVE+ A+ AI+
Sbjct: 27 YVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDR-NFQHAGFNYGFVEYIDMRSAEQAIQT 85
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
LN K++ ++ Q+K+ ++F+G+L P+V++ +L F AFG + + ++M
Sbjct: 86 LNGRKIFDAEVK-----QNKEDTQHHHHVFVGDLSPEVNDDVLAKAFGAFGSM-SEARVM 139
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
D ++G SRG+GF+S+ E ++ AI MNG++L +R I V++A +K G
Sbjct: 140 WDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLGSRAIRVNWANQKTQTG 190
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + +VG+L P+V +++L + F G + V D + +GYGF+ FR
Sbjct: 98 QNKEDTQHHHHVFVGDLSPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRK 157
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA 112
EDA+ AI +N L + IRVN A+Q ++ GA
Sbjct: 158 REDAEQAINTMNGEWLGSRAIRVNWANQKTQTGSSGA 194
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T +VGNL P VT+ L LF G V ++ + DR GY FV+ + + A A+
Sbjct: 249 NCTLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADR------GYAFVKLDTSQAAVSAM 302
Query: 84 KVLNMIKLYGKPIRV 98
L + G+P+++
Sbjct: 303 ATLQNTMVQGRPLKI 317
>gi|392339709|ref|XP_003753884.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 1-like [Rattus norvegicus]
Length = 475
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E+F G ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I+++
Sbjct: 71 TMNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ + SRGFGF+ +++ EA+ AI MNG L +R++ Y
Sbjct: 131 VYNEH---GSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVRSDY 172
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F +AGP++++ V +D +T Y +V F+ +DA++A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEHALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKP+R+ + +D G N+F+ NLD ++ K LYDT SAFG +++
Sbjct: 71 TMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLSCKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+ D S+G+GF+ + + EA++ AIE MNG L + ++ V + +K+ + E
Sbjct: 131 VC---DENGSKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSRKEREAE 182
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ G V++ V D N +GYGFV F + E A+ AI+ +N
Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNVLSCKVVCDE--NGSKGYGFVHFGTREAAERAIEKMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
I L + V + S+ ++ ++GA N++I N D+D++ L D F FG ++
Sbjct: 160 GIPLNDCKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D +G S+GFGF+S++ E + A++ MNG+ L +QI V A KK
Sbjct: 220 -VKVMTD-QSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +LF + GP ++V V D+ + +G+GFV F EDA A+ +
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQ-SGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N +L GK I V +A QD+ + NL++ NLD +D++ L
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + V+ A
Sbjct: 312 KAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEER 374
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 109/178 (61%), Gaps = 11/178 (6%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGP++++ V +D +T GY +V F+ DA+ A+
Sbjct: 11 ASLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 71 SMNFDVIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKAMYDTFSAFGDILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
+ D S+G+GF+ + + EA++ +IE +NG L +++ Y K ++ ER+
Sbjct: 129 KVVC---DENGSKGYGFVHFATEEAANKSIEKVNGMLLNGKKV---YVGKFMSRKERY 180
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 94/172 (54%), Gaps = 10/172 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + +++ F G +++ V D N +GYGFV F +EE A+ +I+ +N
Sbjct: 102 FIKNLDKSIDNKAMYDTFSAFGDILSCKVVCDE--NGSKGYGFVHFATEEAANKSIEKVN 159
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-------GANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L GK + V K K+ D N+F+ N ++D++ L + F +G IV+
Sbjct: 160 GMLLNGKKVYVGKFMSRKERYDAMGGQQKKFTNVFVKNFGDELDDEGLREMFERYGKIVS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M+D +G ++GFGF+ ++ ++ A + +N + + R + V A KK
Sbjct: 220 H-KVMQDDHSGRNKGFGFVCFEDPIDAENACDDLNMKDINGRILYVGRAQKK 270
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V N ++ +E L E+F + G +V+ V +D + ++G+GFV F DA+ A LN
Sbjct: 194 FVKNFGDELDDEGLREMFERYGKIVSHKVMQDDHSGRNKGFGFVCFEDPIDAENACDDLN 253
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
M + G+ + V +A + ++ + G NL++ NLD +D++ L
Sbjct: 254 MKDINGRILYVGRAQKKIERQAELRNRFELMKAERANRYQGVNLYVKNLDDSLDDERLRK 313
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 314 EFMPFGTI-TSAKVM--SEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQ 370
Query: 191 KKDTK 195
+K+ +
Sbjct: 371 RKEDR 375
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L+++F Q G VV+V V +D T GY +V + + DA A+++
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALEM 94
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + G+PIR+ +++D G AN+FI NLD +D K LYDTF FG I++ K+
Sbjct: 95 LNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS-CKV 153
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D +G S+G+GF+ Y+ EA+ AAIE +NG + ++++ V
Sbjct: 154 ATDA-SGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYV 194
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+V NL TE+ L E+F + G + +V V ++ + +GFV F S ++A A++
Sbjct: 214 NVFVKNLSETTTEDDLREIFGKFGTITSVVVMREG-DGRSKCFGFVNFESPDEAALAVQD 272
Query: 86 LNMIKLYGKPIRVNKASQD-----------KKSLDVGA------NLFIGNLDPDVDEKLL 128
LN K K V +A + +K+L A NL++ NLD VD++ L
Sbjct: 273 LNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQETADKYQNTNLYLKNLDDTVDDEKL 332
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F+ FG I T+ K+MRD + G SRG GF+++ S E + A+ MN + + ++ + V+
Sbjct: 333 RELFAEFGAI-TSCKVMRDSN-GASRGSGFVAFKSAEDASRALAEMNNKMVGSKPLYVAL 390
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 391 AQRKEDRKAR 400
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ A ++ NLD + + L++ F G +++ V D + +GYGFV++ +E
Sbjct: 115 SLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATD-ASGESKGYGFVQYERDE 173
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTF 132
A AI+ LN + + K + V K +D +V N+F+ NL E L + F
Sbjct: 174 AAHAAIEKLNGMLMNDKKVYVGPFIRKQERDNSPGNVKFNNVFVKNLSETTTEDDLREIF 233
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ +MR+ D G S+ FGF++++S + + A++ +NG+ +++ V A KK
Sbjct: 234 GKFGTI-TSVVVMREGD-GRSKCFGFVNFESPDEAALAVQDLNGKKFDDKEWYVGRAQKK 291
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
ER E+ ++ K + L+
Sbjct: 292 S---EREMELKEKFEKNLQETADKYQNTNLY 319
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q +A++ Q+ Y+ NLD V +E L ELF + G + + V +D +G GFV F+S
Sbjct: 307 QETADKYQNTNLYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDS-NGASRGSGFVAFKS 365
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
EDA A+ +N + KP+ V A +D+K+
Sbjct: 366 AEDASRALAEMNNKMVGSKPLYVALAQRKEDRKA 399
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 22/190 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA----- 79
A+ YVG+L VTE +L+E F AGPV++++V +D +T GY +V F+ D
Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADVMPTST 70
Query: 80 --------DYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLL 128
+ A+ +N + GKPIR+ + +D +KS VG N+FI NLD +D K L
Sbjct: 71 SSSPLTVTERALDTMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKAL 128
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS- 187
YDTFSAFG I++ + D S+G+ F+ +++ EA+D AIE MNG L +R++ V
Sbjct: 129 YDTFSAFGNILSCKVVC---DENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR 185
Query: 188 YAYKKDTKGE 197
+ +K+ + E
Sbjct: 186 FKSRKEREAE 195
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 115 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 172
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 173 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 232
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 233 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 282
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 198 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 256
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 257 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 316
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 317 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 373
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 374 KPLYVALAQRKEER 387
>gi|440913528|gb|ELR62976.1| Polyadenylate-binding protein 4, partial [Bos grunniens mutus]
Length = 196
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 105/165 (63%), Gaps = 8/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + GKPIR+ + +D +KS VG N+FI NLD +D+K LYDTFSAFG I++
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSLRKS-GVG-NVFIKNLDNSIDDKALYDTFSAFGNILSC 119
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D S+G+ F+ +++ EA+D AIE MNG L +R++ V
Sbjct: 120 KVV---CDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV 161
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + DA+ A+
Sbjct: 83 NTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERAL 142
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN + K R+ + +D G N+FI NLD +D K L+DTF+AFG I++
Sbjct: 143 EQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILS-C 201
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D + G S+G+GF+ Y + E+++AAI+ +NG L ++ + V
Sbjct: 202 KVATD-EHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFV 244
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 30/226 (13%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R+Q Y+ NL + T E L E+F + GP+ + V D H+G+GFV + + E A
Sbjct: 261 RSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDE-HGKHRGFGFVNYENHESAS 319
Query: 81 YAIKVLNMIKLYGKPIRVNKASQDKKSLDV------------------GANLFIGNLDPD 122
A+ L+ G + V +A Q + D G NL++ NLD +
Sbjct: 320 KAVDALHDKDYKGNVLYVARA-QKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDE 378
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
D++ L + F+ FG I T+ K+M+D + G S+GFGF+ + S + + A+ MNG+ L ++
Sbjct: 379 YDDEKLQNEFTPFGTI-TSCKVMKD-EKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSK 436
Query: 183 QITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPP 228
+ VS A +K+ + ++ L A + R + A+G P
Sbjct: 437 PLYVSLAQRKEVRKQQ--------LEAQMSQRSQMRSQQIAAAGIP 474
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G LDP V E +LY+ FS G V + ++ RD T S G+ +++Y + ++ A+E
Sbjct: 85 SLYVGELDPTVTEAMLYEIFSMIGP-VASIRVCRDAVTRRSLGYAYVNYLNAADAERALE 143
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + N+ + ++ +
Sbjct: 144 QLNYSLIKNKACRIMWSQR 162
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 104/165 (63%), Gaps = 3/165 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++
Sbjct: 46 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 105
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K
Sbjct: 106 QLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS-CK 164
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V +
Sbjct: 165 VATD-EHGNSKGYGFVHYETAEAAENAIKNVNGMLLNDKKVYVGH 208
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 102/185 (55%), Gaps = 20/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N+DP+VT+E LF + G V + + +D +G+GFV + + E+A A+ LN
Sbjct: 230 YIKNIDPEVTDEEFEALFREQGNVTSSVIQRDE-EGRSRGFGFVNYETHEEAQKAVDNLN 288
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
+G+ + V++A + +K S G NL++ NLD DVD++ L
Sbjct: 289 DKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGLNLYVKNLDDDVDDEKLRA 348
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ K+MRD D G S+GFGF+ Y S E + A+ MN + + ++ + VS+A
Sbjct: 349 EFEPFGTI-TSAKVMRD-DKGVSKGFGFVCYSSPEEASKAVAEMNNKMIGSKPLYVSHAQ 406
Query: 191 KKDTK 195
+++ +
Sbjct: 407 RREVR 411
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D N +GYGFV + + E A+ AIK +N
Sbjct: 137 FIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGN-SKGYGFVHYETAEAAENAIKNVN 195
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + +++ + K ++ A NL+I N+DP+V ++ F G VT
Sbjct: 196 GMLLNDKKVYVGHHISRKERQSKIDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGN-VT 254
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ I RD + G SRGFGF++Y++ E + A++ +N + R++ VS A KK + E
Sbjct: 255 SSVIQRDEE-GRSRGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFVSRAQKKAEREE 310
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 106/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L+ V + L++LF Q G VV+V V +D T GYG+V F + +DA A+
Sbjct: 32 TSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALD 91
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN + K IRV + +D S G AN+FI NLD +D K L+DTFS+FG I++ K
Sbjct: 92 VLNFTPMNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMS-CK 150
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I D +G S+G+GF+ +++ +++ AI+ +NG + ++Q+ V + +K +
Sbjct: 151 IATDG-SGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDR 201
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ A ++ NLD + + L + F G +++ + D + +GYGFV+F +E+
Sbjct: 113 SSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDG-SGQSKGYGFVQFEAED 171
Query: 78 DADYAIKVLNMIKLYGKPIRVNK--ASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTF 132
A AI LN + + K + V QD+ ++ N+++ NL E L + F
Sbjct: 172 SAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEF 231
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
A+G I T+ +MRD D G S+ FGF+++++ E + A+EA+NG+ + +++ V A KK
Sbjct: 232 GAYGTI-TSAVLMRDAD-GRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKK 289
Query: 193 -----DTKGERHGTPAERIL 207
+ KG T E ++
Sbjct: 290 SEREQELKGRFEQTVKESVV 309
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL TE+ L F G + + + +D + +GFV F + EDA A++ L
Sbjct: 213 VYVKNLSESFTEDDLKNEFGAYGTITSAVLMRD-ADGRSKCFGFVNFENAEDAAKAVEAL 271
Query: 87 NMIKLYGKPIRVNKA---SQDKKSLD---------------VGANLFIGNLDPDVDEKLL 128
N K+ K V KA S+ ++ L G NL++ NLD + ++ L
Sbjct: 272 NGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKL 331
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG I T+ KIMRDP+ G SRG GF+++ + E + A+ MNG+ + ++ + V+
Sbjct: 332 KEMFSEFGTI-TSYKIMRDPN-GVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAV 389
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 390 AQRKEDRRAR 399
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+L+ +V++ LYD F+ G +V+ ++ RD T S G+G++++ + + +
Sbjct: 30 VTTSLYVGDLEVNVNDSQLYDLFNQVGQVVS-VRVCRDLATRRSLGYGYVNFTNPQDAAR 88
Query: 170 AIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFAS 225
A++ +N + N+ I V Y++ +D + GT I + K+ H F+S
Sbjct: 89 ALDVLNFTPMNNKSIRVMYSH-RDPSSRKSGTANIFIKNLDKTIDHKA-LHDTFSS 142
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
++ Q Y+ NLD +T+E L E+F + G + + + +D + +G GFV F + E+
Sbjct: 309 VDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDP-NGVSRGSGFVAFSTPEE 367
Query: 79 ADYAIKVLNMIKLYGKPIRV 98
A A+ +N + KP+ V
Sbjct: 368 ASRALGEMNGKMIVSKPLYV 387
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 99/160 (61%), Gaps = 4/160 (2%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVG+L P+VTE L+E+F GPVV++ V +D +T GY +V F + DA+ A+ LN
Sbjct: 48 YVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALDTLN 107
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 146
+ GKP R+ + +D G N+FI NLD +D K L DTFSAFG I++ K++
Sbjct: 108 YSLIRGKPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILS-CKVVT 166
Query: 147 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D + S+G+GF+ Y++ EA++ AI +NG + +Q+ V
Sbjct: 167 DEN--GSKGYGFVHYETQEAAETAIAKVNGMVINGKQVFV 204
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V D N +GYGFV + ++E A+ AI +N
Sbjct: 136 FIKNLDKTIDNKALLDTFSAFGNILSCKVVTDE--NGSKGYGFVHYETQEAAETAIAKVN 193
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ + GK + V K+ +++G N+F+ NL D + L D FS FG I T+
Sbjct: 194 GMVINGKQVFVGIFVPRKERVELGEGVTKFTNVFVKNLPEDTTDAALNDMFSKFGKI-TS 252
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
IM+ D S+GFGF+ Y+ E + AA+ A+NG L + + V+ A K K ER
Sbjct: 253 VVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQK---KAEREAE 309
Query: 202 PAER 205
+R
Sbjct: 310 LKQR 313
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 19/169 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NL T+ L ++F + G + +V + K + +G+GFV + EDA A+ LN
Sbjct: 227 FVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALN 286
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+L GK + V +A + K+ D G NL++ NLD +DE +
Sbjct: 287 GTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAIDEDKIRT 346
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
F+ FG I T+ KIMRD + G SRGFGFI + S E + A+ MNGQ +
Sbjct: 347 EFAPFGTI-TSVKIMRD-EKGKSRGFGFICFSSAEEATKAVTEMNGQTI 393
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+L P+V E L++ F+ G +V+ ++ RD T S G+ ++++ + ++ A++
Sbjct: 46 SLYVGDLHPEVTEAQLFEIFNNIGPVVS-IRVCRDAITRRSLGYAYVNFHAAVDAERALD 104
Query: 173 AMN 175
+N
Sbjct: 105 TLN 107
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L++LF Q G VV+V + +D + GYG+V F + DA A+
Sbjct: 24 TSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMD 83
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN L KPIR+ + +D G AN+FI NLD +D K LYDTFS FG I++ K
Sbjct: 84 VLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILS-CK 142
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I D +G S+G+GF+ +++ E++ +AI+ +NG L ++ + V + +K +
Sbjct: 143 IAMDA-SGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDR 193
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 12/191 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ A ++ NLD + + L++ F G +++ + D + L +GYGFV+F +EE
Sbjct: 105 SVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMD-ASGLSKGYGFVQFENEE 163
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTF 132
A AI LN + L KP+ V + QD+ + A N+++ NL V + L +TF
Sbjct: 164 SAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTF 223
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +MRD D G S+ FGF+++++ +A+ A+EA+NG+ +++ V A KK
Sbjct: 224 GEYGTI-TSAVVMRDVD-GKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALKK 281
Query: 193 DTK----GERH 199
+ ERH
Sbjct: 282 YERELELKERH 292
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL VT++ L F + G + + V +D V + +GFV F + + A A++ L
Sbjct: 205 VYVKNLSESVTDDDLKNTFGEYGTITSAVVMRD-VDGKSKCFGFVNFENADAAAEAVEAL 263
Query: 87 NMIKLYGKPIRVNKASQD---------------KKSLD--VGANLFIGNLDPDVDEKLLY 129
N K K V KA + K+++D GANL++ NLD V ++ L
Sbjct: 264 NGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLS 323
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS FG VT+ KI+RDP G SRG GF+++ + E + A+ MNG+ + + + V+ A
Sbjct: 324 ELFSEFGT-VTSCKILRDPQ-GISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPA 381
Query: 190 YKKDTKGER 198
KK+ + R
Sbjct: 382 QKKEERKAR 390
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ A Y+ NLD VT+E L ELF + G V + + +D + +G GFV F +
Sbjct: 297 KETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDP-QGISRGSGFVAFST 355
Query: 76 EEDADYAIKVLNMIKLYGKPIRV 98
E+A A+ +N + GKP+ V
Sbjct: 356 PEEATRALAEMNGKMVAGKPLYV 378
>gi|323448247|gb|EGB04148.1| hypothetical protein AURANDRAFT_70409 [Aureococcus anophagefferens]
Length = 616
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 112/191 (58%), Gaps = 10/191 (5%)
Query: 13 LLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
+LG S+ A+ YVG+L +E LL+E+F GPV ++ V +D VT GY +V
Sbjct: 1 MLGASSSVPFHSASLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVN 60
Query: 73 FRSEEDADYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLY 129
F + DA+ A+ +N + KP R+ + +D +KS VG N+F+ NLD +D K L+
Sbjct: 61 FHNVSDAERALDTMNYTLIKSKPCRIMWSQRDPTLRKS-GVG-NVFVKNLDSSIDHKALF 118
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
DTFS FG I++ K+ D + G S+G+G++ Y+S +A+ AI +N +C++++ V +
Sbjct: 119 DTFSLFGNILS-CKVATD-EAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHF 176
Query: 190 YKKDTKGERHG 200
++ ER G
Sbjct: 177 VRRT---ERSG 184
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D QGYG+V + SE+ A AI +N
Sbjct: 104 FVKNLDSSIDHKALFDTFSLFGNILSCKVATDEAGR-SQGYGYVHYESEDAATDAINKIN 162
Query: 88 MIKLYGKPIRVNKASQ--DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
+ + K + V + ++ NL++ N D DE L F F
Sbjct: 163 SMTICDKEVYVGHFVRRTERSGQSDWTNLYVKNFPADWDEATLRKAFEMFAA-------- 214
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
+ FG+++++ +A+ AA++A+NG
Sbjct: 215 -----ADGSAFGWVNFEGHDAAVAAMDALNG 240
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G NLF+ NLD +D+ L + F+ +G I T+ ++MR+P TG SRGFGF+ + S E + A
Sbjct: 291 GVNLFVKNLDDALDDDQLREHFTEYGTI-TSARVMREPATGTSRGFGFVCFSSPEEAAKA 349
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTK 195
+ MN + + + I V+ A +K+ +
Sbjct: 350 VTEMNNKLVLGKPIFVALAQRKEVR 374
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++ Q +V NLD + ++ L E F + G + + V ++ T +G+GFV F S E+A
Sbjct: 287 KKYQGVNLFVKNLDDALDDDQLREHFTEYGTITSARVMREPATGTSRGFGFVCFSSPEEA 346
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK 105
A+ +N + GKPI V A + +
Sbjct: 347 AKAVTEMNNKLVLGKPIFVALAQRKE 372
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ V++ L+ELF QAG VV+V V +D + GY +V F + DA A++V
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L KPIRV +++D S G AN+FI NLD +D K L++TFS+FG I++ K+
Sbjct: 101 LNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKMIDNKSLHETFSSFGTILS-CKV 159
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D + G S+GFGF+ Y+ EA+ AI+++NG + ++ + V
Sbjct: 160 AMD-EGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFV 200
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ R+ A ++ NLD + + L E F G +++ V D +G+GFV++ EE
Sbjct: 121 SSRRSGSANIFIKNLDKMIDNKSLHETFSSFGTILSCKVAMDE-GGQSKGFGFVQYEKEE 179
Query: 78 DADYAIKVLNMIKLYGKPIRVN---KASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTF 132
A AIK LN + + KP+ V + + S D N+F+ NL ++ L F
Sbjct: 180 AAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIF 239
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +M D G SR FGFI++++ +A+ A++ +NG+ + +++ V A KK
Sbjct: 240 GEYGNI-TSAVVMIGMD-GKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKK 297
Query: 193 DTKGERHGTPAERIL 207
+ E+IL
Sbjct: 298 SEREMELKRRFEQIL 312
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 102/196 (52%), Gaps = 20/196 (10%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
HS ++ + +V NL T+E L ++F + G + + V + + +GF+ F +
Sbjct: 211 HSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGNITSAVVMIG-MDGKSRCFGFINFENP 269
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGNL 119
+ A A++ LN K+ K V +A + ++ +++ G NL++ NL
Sbjct: 270 DAASRAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQILKDAADKYQGLNLYLKNL 329
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D + + L + FS FG I T+ K+MRD + G S+G GF+++ + E + A+ MNG+ +
Sbjct: 330 DDSIGDDQLRELFSNFGKI-TSCKVMRDQN-GLSKGSGFVAFSTREEASQALTEMNGKMI 387
Query: 180 CNRQITVSYAYKKDTK 195
+ + V++A +K+ +
Sbjct: 388 SGKPLYVAFAQRKEDR 403
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 109/174 (62%), Gaps = 9/174 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADY 81
A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+ A+
Sbjct: 12 AHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYTDMRSAET 69
Query: 82 AIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
A++ LN K++ IRVN A Q+K+ ++F+G+L P+V++++L F+AF +
Sbjct: 70 ALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAFAAFPTM 129
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 130 -SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 182
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 17 HSAERNQDATA-----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFV 71
+ ++N++ T+ +VG+L P+V +E+L + F + + V D + +GYGF+
Sbjct: 90 YQGQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFL 149
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK 106
FR + DA+ AI +N L + IRVN A+Q +
Sbjct: 150 AFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQ 184
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
++T YVGNL P T+ L LF G + + + DR G+ FV+ + E+A AI
Sbjct: 256 NSTVYVGNLVPFATQADLIPLFQSIGYLSEIRMQADR------GFAFVKLDTHENAATAI 309
Query: 84 KVLNMIKLYGKPIRVN 99
L ++G+PI+V+
Sbjct: 310 VSLQGQMIHGRPIKVS 325
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+ +++GNL P + L F + G + +I D RGF F+ D+ E + AI
Sbjct: 257 STVYVGNLVPFATQADLIPLFQSIGYL---SEIRMQAD----RGFAFVKLDTHENAATAI 309
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
++ GQ + R I VS+ KD TP
Sbjct: 310 VSLQGQMIHGRPIKVSWG--KDRNAGEGATP 338
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVG+L P V E L+E F GP+ ++ V +D +T GY +V F+ DA+ A+ LN
Sbjct: 22 YVGDLAPDVNEAQLYEKFNSTGPISSIRVCRDAITRRSLGYAYVNFQQPNDAERALDTLN 81
Query: 88 MIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
+ GKP R+ + +D + VG N+FI NL+ D+D K +YDTFSAFG I++ KI
Sbjct: 82 FDPVNGKPCRIMWSQRDPSLRRSGVG-NIFIKNLEKDIDNKAIYDTFSAFGNILS-CKIA 139
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
D + GNS+G+ F+ +++ EA++ AIE +NG L +++ V + + + E+ G A
Sbjct: 140 LD-ENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVFVGHFMSRKERMEKIGNLA 196
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%), Gaps = 10/185 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NL+ + + +++ F G +++ + D N +GY FV F ++E
Sbjct: 100 SLRRSGVGNIFIKNLEKDIDNKAIYDTFSAFGNILSCKIALDENGN-SKGYAFVHFETQE 158
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLD-VG------ANLFIGNLDPDVDEKLLYD 130
A+ AI+ +N + L GK + V K+ ++ +G NL++ N D+ + D
Sbjct: 159 AANRAIEKVNGMLLSGKKVFVGHFMSRKERMEKIGNLAAKYTNLYVKNFRDDISDDEFRD 218
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F G IV+ +MRD D+G SRGFGF+SY++ EA+ A+E +N + R++ V+ A
Sbjct: 219 LFEQCGKIVSCV-VMRD-DSGKSRGFGFVSYETHEAAQKAVETLNEKEFDLRRMYVARAQ 276
Query: 191 KKDTK 195
KK +
Sbjct: 277 KKSER 281
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 20/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N ++++ +LF Q G +V+ V +D + +G+GFV + + E A A++ LN
Sbjct: 203 YVKNFRDDISDDEFRDLFEQCGKIVSCVVMRDD-SGKSRGFGFVSYETHEAAQKAVETLN 261
Query: 88 MIKLYGKPIRVNKASQ------------DKKSLDV-----GANLFIGNLDPDVDEKLLYD 130
+ + + V +A + ++K ++ G NL++ NLD +D+ L
Sbjct: 262 EKEFDLRRMYVARAQKKSERSALLRRQYEQKKQEMMKRFQGVNLYVKNLDDVIDDAKLRQ 321
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ K+M D + G SRGFGF+ + S E + A+ MNG+ + ++ + V+ A
Sbjct: 322 EFANFGTI-TSAKVMSD-EKGISRGFGFVCFSSPEEATKAVTEMNGRIIISKPLYVALAQ 379
Query: 191 KKDTK 195
+K+ +
Sbjct: 380 RKEDR 384
>gi|328713207|ref|XP_001947071.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F G V+++ V +D +T GY +V F++ DA+ A+
Sbjct: 2 ASLYVGDLHSDVTEAMLFEKFSTVGAVLSIRVCRDMITRRSLGYAYVNFQNMADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+P+R+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDILKGRPMRIMWSQRDPSLRKS-GVG-NVFIKNLDRSIDNKAMYDTFSAFGNILS- 118
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
K+ +D +TG S+G+GF+ ++ +++ +IE +NG L +++ V + +KD + E
Sbjct: 119 CKVAQD-ETGQSKGYGFVHFEMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKE 174
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 90/158 (56%), Gaps = 10/158 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + +++ F G +++ V +D T +GYGFV F E+ A +I+ +
Sbjct: 92 VFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDE-TGQSKGYGFVHFEMEQSATQSIEKV 150
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L GK + V + + + ++G N++I N+D +V++K L++ F +G I
Sbjct: 151 NGMLLNGKKVFVGRFVGRKDREKELGQKAKLYTNVYIKNIDENVNDKELFEMFEKYGSIT 210
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
+ + RD G+SRGFGF++++ E ++ A+ ++G+
Sbjct: 211 SFKVMFRDD--GSSRGFGFVAFEDPEEAEKAVTELHGK 246
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 32/192 (16%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N+D V ++ L+E+F + G + + V R +G+GFV F E+A+ A+
Sbjct: 185 VYIKNIDENVNDKELFEMFEKYGSITSFKVMF-RDDGSSRGFGFVAFEDPEEAEKAV--- 240
Query: 87 NMIKLYGKPI---------RVNKASQDKKSLDV--------------GANLFIGNLDPDV 123
+L+GK R K ++ ++ L G NL++ NLD +
Sbjct: 241 --TELHGKESPEGKTYYVGRAQKKAERQQELKRKFEQYKIERMNRYQGVNLYVKNLDDTI 298
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L FS FG I T+ K+M D G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 299 DDERLRKEFSVFGTI-TSAKVMMDD--GRSKGFGFVCFSSPEEATKAVTDMNGRIVGTKP 355
Query: 184 ITVSYAYKKDTK 195
+ V+ A +K+ +
Sbjct: 356 LYVALAQRKEDR 367
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 111/174 (63%), Gaps = 9/174 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADY 81
A YVGNL P+VTE +L E+F AGPV +V + DR N G YGFVE+ A+
Sbjct: 17 AHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDR--NYQHGGLNYGFVEYIDMRAAET 74
Query: 82 AIKVLNMIKLYGKPIRVNKA---SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
A++ LN K++ IRVN A +Q+K+ ++F+G+L P+V++++L FSAFG +
Sbjct: 75 ALQTLNGRKIFDTEIRVNWAYQGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSL 134
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K
Sbjct: 135 -SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQK 187
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 48/214 (22%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q+ + + +VG+L P+V +E+L + F G + + V D + +GYGF+ FR
Sbjct: 99 QNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLAFRD 158
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLD-------------------------- 109
+ DA+ AI +N L + IRVN A+Q +
Sbjct: 159 KTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAMGGGAPAPAAARPSPGLGGSPAPMNFQ 218
Query: 110 ---------------VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSR 154
+ +++GNL P + L F + G + +I D R
Sbjct: 219 GGPISYESVVSQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYL---QEIRMQAD----R 271
Query: 155 GFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
GF F+ D+ E + AI + GQ + R I S+
Sbjct: 272 GFAFVKLDTHEHAAMAIIQLQGQMVHGRPIKCSW 305
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
++T YVGNL P T+ L LF G + + + DR G+ FV+ + E A AI
Sbjct: 235 NSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQADR------GFAFVKLDTHEHAAMAI 288
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVGA 112
L ++G+PI K S K D GA
Sbjct: 289 IQLQGQMVHGRPI---KCSWGKDRADGGA 314
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E+F G ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 74 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 133
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I+++
Sbjct: 134 TMNFEMIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 193
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + SRGFGF+ +++ EA+ AI MNG L +R++ V + +K K E
Sbjct: 194 VYNEH---GSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGH-FKSRQKRE 243
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 30/210 (14%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL + E+ L +LF Q G + +V V +D +G+GFV F E+A A+ +
Sbjct: 256 VYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHM 314
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N ++ G+ + V +A Q++++ G NL++ NLD ++++ L
Sbjct: 315 NGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQNRYQGVNLYVKNLDDSINDERLK 374
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FSA+GVI T+ K+M ++ +S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 375 EVFSAYGVI-TSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 431
Query: 190 YKKDTKGERHGTPAERILAANNPSSQKSRP 219
+K+ + + + N Q SRP
Sbjct: 432 QRKEER---------KAILTNQYRRQLSRP 452
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH--QGYGFVEFRSEEDADYAIKV 85
++ NL+ + + L++ F G +++ V V N H +G+GFV F + E A AI
Sbjct: 165 FIKNLENSIDNKALYDTFSTFGSILSSKV----VYNEHGSRGFGFVHFETHEAAQKAINT 220
Query: 86 LNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L + + V S+ K+ ++GA N+++ NL D+DE+ L D FS FG +
Sbjct: 221 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNVYVKNLHMDMDEQGLQDLFSQFGKM 280
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRD + G SRGFGF++++ E + A++ MNG+ + + + V A K+
Sbjct: 281 -QSVKVMRDSN-GQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLYVGRAQKR 332
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q R Q YV NLD + +E L E+F G + + V + ++ +G+GFV F S
Sbjct: 348 QERQNRYQGVNLYVKNLDDSINDERLKEVFSAYGVITSAKVMTE--SSHSKGFGFVCFSS 405
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF 115
E+A A+ +N + KP+ V A + ++ + N +
Sbjct: 406 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 445
>gi|323448756|gb|EGB04650.1| hypothetical protein AURANDRAFT_55048 [Aureococcus anophagefferens]
Length = 604
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
A+ YVG+L +E LL+E+F GPV ++ V +D VT GY +V F + DA+ A
Sbjct: 10 HSASLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERA 69
Query: 83 IKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
+ +N + KP R+ + +D +KS VG N+F+ NLD +D K L+DTFS FG I+
Sbjct: 70 LDTMNYTLIKSKPCRIMWSQRDPTLRKS-GVG-NVFVKNLDASIDHKALFDTFSLFGNIL 127
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ K+ D + G S+G+G++ Y+S +A+ AI +N +C++++ V + ++ +
Sbjct: 128 S-CKVATD-EAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTER 181
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D QGYG+V + SE+ A AI +N
Sbjct: 103 FVKNLDASIDHKALFDTFSLFGNILSCKVATDEAGR-SQGYGYVHYESEDAATDAINKIN 161
Query: 88 MIKLYGKPIRVNKASQ--DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
+ + K + V + ++ NL++ N D DE+ L F FG I +
Sbjct: 162 SMTICDKEVYVGHFVRRTERSGQSDWTNLYVKNFPADWDEETLRKAFETFGAITS----C 217
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
+ + FG++++++ +A+ AA++A+NG
Sbjct: 218 KAAAAADGSAFGWVNFEAHDAAVAAMDALNG 248
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N EE L + F G + + K +G+V F + + A A+ LN
Sbjct: 191 YVKNFPADWDEETLRKAFETFGAITSC---KAAAAADGSAFGWVNFEAHDAAVAAMDALN 247
Query: 88 MI-----------KLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNL 119
I P+ V +A + K D G NLF+ NL
Sbjct: 248 GIAELPGQAGGAPTTLKAPLFVGRAQKKIERERELKAKFDAAKIERIKKYQGVNLFVKNL 307
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D +D+ L + F+ +G I T+ ++MR+P TG SRGFGF+ + S E + A+ MN + +
Sbjct: 308 DDGLDDDQLRENFAEYGTI-TSARVMREPATGTSRGFGFVCFSSPEEAAKAVTEMNNKLV 366
Query: 180 CNRQITVSYAYKKDTK 195
+ I V+ A +K+ +
Sbjct: 367 LGKPIFVALAQRKEVR 382
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
++ Q +V NLD + ++ L E F + G + + V ++ T +G+GFV F S E+A
Sbjct: 295 KKYQGVNLFVKNLDDGLDDDQLRENFAEYGTITSARVMREPATGTSRGFGFVCFSSPEEA 354
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDK 105
A+ +N + GKPI V A + +
Sbjct: 355 AKAVTEMNNKLVLGKPIFVALAQRKE 380
>gi|426396432|ref|XP_004064447.1| PREDICTED: uncharacterized protein LOC101125114 [Gorilla gorilla
gorilla]
Length = 533
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ YVG+L P+VTE +L+E F AGP++++ + +D++T GY +V ++ DA A
Sbjct: 333 QMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRA 392
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
++ LN + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++
Sbjct: 393 LETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSC 452
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGER 198
D +G+GF+ + E+++ AI+ MNG +L R+I V + K+ + ER
Sbjct: 453 KVAC---DEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAER 507
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 6/180 (3%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L+++F Q G VV+V V +D T GY +V + S DA A+++
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALEM 100
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + GKPIR+ +++D G AN+FI NLD +D K LYDTF FG I++ K+
Sbjct: 101 LNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS-CKV 159
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAE 204
D +G S+G+GF+ Y+ EA+ AAI+ +NG + ++++ V +K ER +P +
Sbjct: 160 ATDA-SGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQ---ERDNSPGQ 215
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 20/190 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TE+ L E+F + G + + V ++ + +GFV F S +DA A++
Sbjct: 220 NVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREG-DGRSKCFGFVNFESPDDAAQAVQE 278
Query: 86 LNMIKLYGKPIRVNKASQD-----------KKSLDVGA------NLFIGNLDPDVDEKLL 128
LN K K V +A + +K+L A NL++ NLD VD+ L
Sbjct: 279 LNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDDKL 338
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F+ +G I T+ K+MRD + G SRG GF+++ S E + A+ MN + + ++ + V+
Sbjct: 339 RELFAEYGTI-TSCKVMRDSN-GVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYVAL 396
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 397 AQRKEDRKAR 406
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q +A++ Q+ Y+ NLD V ++ L ELF + G + + V +D + +G GFV F+S
Sbjct: 313 QEAADKYQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDS-NGVSRGSGFVAFKS 371
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
EDA A+ +N + KP+ V A +D+K+
Sbjct: 372 AEDASRALAEMNSKMVGSKPLYVALAQRKEDRKA 405
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L+++F Q G VV+V V +D + GY +V + + DA A+++
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALEM 92
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + G+PIR+ +++D G AN+FI NLD +D K LYDTF FG I++ K+
Sbjct: 93 LNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILS-CKV 151
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
DP G S+G+GF+ Y+ EA+ AAIE +NG + ++++ V
Sbjct: 152 ATDP-AGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYV 192
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 20/190 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TE+ L E+F + G + +V V +D + +GFV F S ++A A++
Sbjct: 212 NVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDG-DGRSKCFGFVNFESPDEAALAVQD 270
Query: 86 LNMIKLYGKPIRVNKASQD-----------KKSLDVGA------NLFIGNLDPDVDEKLL 128
LN K K V +A + +K+L A NL++ NLD VD++ L
Sbjct: 271 LNGKKFSDKEWYVGRAQKKSEREIELKEKFEKNLQEAADKYQNTNLYLKNLDDTVDDEKL 330
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ F+ FG I T+ K+MRD + G SRG GF+++ S + + A+ MN + + N+ + V+
Sbjct: 331 RELFAEFGTI-TSCKVMRDSN-GASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVAL 388
Query: 189 AYKKDTKGER 198
A +K+ + R
Sbjct: 389 AQRKEDRKAR 398
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q +A++ Q+ Y+ NLD V +E L ELF + G + + V +D +G GFV F+S
Sbjct: 305 QEAADKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDS-NGASRGSGFVAFKS 363
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
+DA A+ +N + KP+ V A +D+K+
Sbjct: 364 ADDASRALAEMNNKMVGNKPLYVALAQRKEDRKA 397
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+LD V + L+D F+ G +V+ ++ RD + S G+ +++Y++ + A+E
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVS-VRVCRDVTSRKSLGYAYVNYNTPADAARALE 91
Query: 173 AMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASG 226
+N + R I + Y+ +D + GT I + K+ T G
Sbjct: 92 MLNFTPINGRPIRIMYS-NRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFG 144
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 97/162 (59%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L P TE LL+ F + G V++ + +D T GYG+V F +DA+ A++
Sbjct: 2 SLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALEN 61
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN G+PIR+ + +D G N+FI NLD +D+K LYDTFS G I++ KI
Sbjct: 62 LNYESFMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILS-CKI 120
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
D + GNS+G+GF+ ++ E ++ AIE +NG + +R + V
Sbjct: 121 AMD-EHGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYV 161
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + ++ L++ F G +++ + D N +GYGFV F EE
Sbjct: 82 SLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMDEHGN-SKGYGFVHFEKEE 140
Query: 78 DADYAIKVLNMIKLYGKPIRVNKA--SQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTF 132
A+ AI+ +N + + + + V K S D+KS N+++ N PD ++ L D F
Sbjct: 141 CAERAIEKINGMMINDRVVYVGKFIPSSDRKSASGKLRFNNIYVKNFPPDTTDEKLRDMF 200
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
S FG I + + ++P+ G S+GFGF+ + + ++ A+ M+G+ + R + S A +K
Sbjct: 201 SEFGEI-KSCCVEKNPE-GKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRK 258
Query: 193 DTKGE 197
+ + E
Sbjct: 259 EERQE 263
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 100/186 (53%), Gaps = 21/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N P T+E L ++F + G + + V K+ +G+GFV F + A+ A++V++
Sbjct: 183 YVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKN-PEGKSKGFGFVCFHDPDHAEQAVRVMH 241
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV-----------GANLFIGNLDPDVDEKLLY 129
++ G+ + ++A + K+ L+ G NL++ NLD ++D++ L
Sbjct: 242 GKEINGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKNLDDNIDDERLK 301
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS +G I T+ K+M D + G S+GFGF+ + E + A+ MN + ++ + V+ A
Sbjct: 302 EAFSHYGPI-TSAKVMTDAN-GRSKGFGFVCFTQPEQAARAVTEMNATLVGSKPLYVALA 359
Query: 190 YKKDTK 195
+K+ +
Sbjct: 360 QRKEDR 365
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+L P E LLY FS G +++ +I RD T NS G+G+++++ + ++ A+E
Sbjct: 2 SLYVGDLHPLATEALLYSKFSEIGTVLS-ARICRDLATRNSLGYGYVNFEEPKDAERALE 60
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + R I + ++ +
Sbjct: 61 NLNYESFMGRPIRIMWSQR 79
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E+F G ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I+++
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + SRGFGF+ +++ EA+ AI MNG L +R++ V + +K K E
Sbjct: 131 VYNEH---GSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGH-FKSRQKRE 180
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH--QGYGFVEFRSEEDADYAIKV 85
++ NL+ + + L++ F G +++ V V N H +G+GFV F + E A AI
Sbjct: 102 FIKNLENSIDNKALYDTFSTFGSILSSKV----VYNEHGSRGFGFVHFETHEAAQKAINT 157
Query: 86 LNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L + + V S+ K+ ++GA N+++ NL +VDE+ L D FS FG +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRD + G SRGFGF++++ E + A++ MNG+ + + + V A K+
Sbjct: 218 -QSVKVMRDSN-GQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G + +V V +D +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A Q++++ G NL++ NLD ++++ L +
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLKE 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M ++ +S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 VFSTYGVI-TSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q R Q YV NLD + +E L E+F G + + V + ++ +G+GFV F
Sbjct: 283 MKQERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCF 340
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF 115
S E+A A+ +N + KP+ V A + ++ + N +
Sbjct: 341 SSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E+F G ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I+++
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + SRGFGF+ +++ EA+ AI MNG L +R++ V + +K K E
Sbjct: 131 VYNEH---GSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGH-FKSRQKRE 180
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH--QGYGFVEFRSEEDADYAIKV 85
++ NL+ + + L++ F G +++ V V N H +G+GFV F + E A AI
Sbjct: 102 FIKNLENSIDNKALYDTFSTFGSILSSKV----VYNEHGSRGFGFVHFETHEAAQKAINT 157
Query: 86 LNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L + + V S+ K+ ++GA N+++ NL +VDE+ L D FS FG +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRD + G SRGFGF++++ E + A++ MNG+ + + + V A K+
Sbjct: 218 -QSVKVMRDSN-GQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G + +V V +D +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A Q++++ G NL++ NLD ++++ L +
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLKE 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M ++ +S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 VFSTYGVI-TSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q R Q YV NLD + +E L E+F G + + V + ++ +G+GFV F
Sbjct: 283 MKQERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCF 340
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF 115
S E+A A+ +N + KP+ V A + ++ + N +
Sbjct: 341 SSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 103/168 (61%), Gaps = 4/168 (2%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + D + A++ LN
Sbjct: 56 YVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEELN 115
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 146
+ G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ K+ +
Sbjct: 116 YTLIKGRPCRIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILS-CKVAQ 174
Query: 147 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKD 193
D + NS+G+GF+ Y++ EA++ AI+ +NG L +++ V + KKD
Sbjct: 175 D-ENANSKGYGFVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKD 221
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F G +++ V +D N +GYGFV + + E A+ AIK +N
Sbjct: 144 FIKNLDAAIDNKALHDTFAAFGNILSCKVAQDENAN-SKGYGFVHYETAEAANQAIKNVN 202
Query: 88 MIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ L K + R++K + K + N+++ N+D + + + F +G
Sbjct: 203 GMLLNEKKVFVGHHIPKKDRMSKVEEMKANF---TNIYVKNIDSETTDNEFRELFEKYGD 259
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I T+ + D ++G +RGFGF++Y E + A+E +N +++ V A KK + E
Sbjct: 260 I-TSASLAHDNESGKNRGFGFVNYIRHEDAYKAVEELNDSDFKGQKLYVGRAQKKHEREE 318
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 68/235 (28%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D + T+ ELF + G + + + D + ++G+GFV + EDA A++ LN
Sbjct: 237 YVKNIDSETTDNEFRELFEKYGDITSASLAHDNESGKNRGFGFVNYIRHEDAYKAVEELN 296
Query: 88 MIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYD 130
G+ + V +A Q+K + G NL++ NL ++D+ L
Sbjct: 297 DSDFKGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYTGVNLYVKNLADEIDDDELRK 356
Query: 131 TFSAFGVIVTNPKIMRDP----------------------------------------DT 150
F +G I T+ K+MRD DT
Sbjct: 357 VFEPYGAI-TSAKVMRDTLPADGSETPAKKEGDAEEKEAEPEKDGEKKDDVDDLSKKLDT 415
Query: 151 ----------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
G S+GFGF+ + + + + A+ +N + + + + V+ A +K+ +
Sbjct: 416 VTIQGEKKLLGKSKGFGFVCFSNPDEATKAVTELNQKMVHGKPLYVALAQRKEVR 470
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 114/196 (58%), Gaps = 7/196 (3%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVTE LL E+F AG V + + ++ YGFV++ A AI
Sbjct: 62 SVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKEKSS----YGFVDYYERGSAALAILT 117
Query: 86 LNMIKLYGKPIRVN--KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN +++G+PIRVN AS ++ ++F+G+L P+V + L+ FSA+ ++ +
Sbjct: 118 LNGKQIFGQPIRVNWAYASGQREDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPNCSDAR 177
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH-GTP 202
+M D TG SRG+GF+S+ + + + +AI +NGQ+L NRQI ++A K GE +
Sbjct: 178 VMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKGANSGEDQLASD 237
Query: 203 AERILAANNPSSQKSR 218
++ I+ NN ++ ++
Sbjct: 238 SKSIVDVNNNFTENAK 253
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 40/199 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGP-VVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+VG+L P+VT+ L+ F P + V D+ T +GYGFV FR+++DA AI L
Sbjct: 149 FVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDL 208
Query: 87 NMIKLYGKPIRVNKASQ-----------DKKSL-DVGANL-------------------- 114
N L + IR N A++ D KS+ DV N
Sbjct: 209 NGQWLGNRQIRCNWATKGANSGEDQLASDSKSIVDVNNNFTENAKQKSNEDAPENNPLYR 268
Query: 115 --FIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
++GNL +V + +L+ F A G + + + +GFGF+ Y + + AI+
Sbjct: 269 TVYVGNLAHEVTQDVLHRFFHALG-----AGAIEEVRVQHGKGFGFVKYSNHAETALAIQ 323
Query: 173 AMNGQYLCNRQITVSYAYK 191
NG+ L + + S+ K
Sbjct: 324 TGNGRILGGKPVKCSWGNK 342
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 26 TAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
T YVGNL +VT+++L F + AG + V V + G+GFV++ + + AI
Sbjct: 269 TVYVGNLAHEVTQDVLHRFFHALGAGAIEEVRVQHGK------GFGFVKYSNHAETALAI 322
Query: 84 KVLNMIKLYGKPIRVN 99
+ N L GKP++ +
Sbjct: 323 QTGNGRILGGKPVKCS 338
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 108/178 (60%), Gaps = 12/178 (6%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADY 81
A YVGNL P+VTE +L E+F AG V V + DR N G YGFVE+ A+
Sbjct: 108 AHLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDR--NFQHGGLNYGFVEYYEMRSAET 165
Query: 82 AIKVLNMIKLYGKPIRVNKASQD------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAF 135
A++ L K++ IRVN A Q+ K+ L ++F+G+L P+V++ +L F+AF
Sbjct: 166 ALQTLGGRKIFDNEIRVNWAYQNSQQNAVKEDLSGHFHVFVGDLSPEVNDDVLAKAFAAF 225
Query: 136 GVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
G + ++ ++M D ++G SRG+GF+++ ++ AI MNG++L +R I V++A +K+
Sbjct: 226 GSL-SDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKN 282
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 52/206 (25%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+V +++L + F G + + V D + +GYGF+ FR + DA+ AI +N
Sbjct: 205 FVGDLSPEVNDDVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN 264
Query: 88 MIKLYGKPIRVNKASQDKKSL--------------------------------------- 108
L + IRVN A+Q + +
Sbjct: 265 GEWLGSRAIRVNWANQKNQGMPGAPGSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSYEA 324
Query: 109 ------DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYD 162
+ ++ GNL P + L F FG IV +I D RGF F+ D
Sbjct: 325 VVQQAPAYNSTVYTGNLVPYCTQADLIPLFQGFGYIV---EIRMQAD----RGFAFVKLD 377
Query: 163 SFEASDAAIEAMNGQYLCNRQITVSY 188
+ E + AI + G + R + S+
Sbjct: 378 THENAAMAIVNLTGTPVHGRPLKCSW 403
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
++T Y GNL P T+ L LF G +V + + DR G+ FV+ + E+A AI
Sbjct: 333 NSTVYTGNLVPYCTQADLIPLFQGFGYIVEIRMQADR------GFAFVKLDTHENAAMAI 386
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLD 109
L ++G+P++ + +D+ S D
Sbjct: 387 VNLTGTPVHGRPLKCSWG-KDRASAD 411
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 128 CKVA--CDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH-FK--SRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L + FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L ELF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPK 143
FS +GVI + K
Sbjct: 313 EFSPYGVITSAKK 325
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q + YVG+LD V + L+++F Q G VV+V V +D T L GY +V F S DA A
Sbjct: 37 QATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARA 96
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+++LN + GKPIR+ +++D S G AN+FI NLD +D K LYDTFS FG I++
Sbjct: 97 LEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILS- 155
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ + +G S+G+GF+ ++ EA+ AI +NG L ++++ V +K + G
Sbjct: 156 CKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGN 214
Query: 202 PAERILAANNPSSQKSRPH 220
P + N S + +
Sbjct: 215 PKFNNVYVKNLSESTTEDN 233
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 21/191 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL TE+ L E+F + GP+ +V V ++ + +GFV F + +DA A++
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVED 277
Query: 86 LNMIKLYGKP---IRVNKASQDKKSL--------------DVGANLFIGNLDPDVDE-KL 127
LN K K R K S+ + L + G NL++ NLD +D+ +
Sbjct: 278 LNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEK 337
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ FG I T+ K+MRD + G S+G GF+++ S E + A+ AMNG+ + ++ + V+
Sbjct: 338 LKEIFADFGTI-TSCKVMRDLN-GVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
Query: 188 YAYKKDTKGER 198
A +K+ + R
Sbjct: 396 LAQRKEERRAR 406
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 11/211 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ ++ A ++ NLD + + L++ F G +++ V + ++ +GYGFV+F EE
Sbjct: 120 SSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATE-MSGESKGYGFVQFELEE 178
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTF 132
A AI LN + L K + V + ++ +V N+++ NL E L + F
Sbjct: 179 AAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIF 238
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
FG I T+ +MR+ D G SR FGF+++++ + + A+E +NG+ +++ V A K
Sbjct: 239 GKFGPI-TSVVVMREGD-GKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQK- 295
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
K ER E+ ++ K++ L+
Sbjct: 296 --KSEREMELKEKFEKNIKEAADKNQGTNLY 324
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 16 QHSAERNQDATAYVGNLDPQV-TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+ +A++NQ Y+ NLD + +E L E+F G + + V +D + + +G GFV F+
Sbjct: 312 KEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRD-LNGVSKGSGFVAFK 370
Query: 75 SEEDADYAIKVLNMIKLYGKPIRV 98
S EDA A+ +N + KP+ V
Sbjct: 371 SAEDASRALVAMNGKMIGSKPLYV 394
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N A+ YVG+LDP V+E LL+++F G V ++ V +D +T GY +V F E
Sbjct: 37 NSSASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKK 96
Query: 82 AIKVLNMIKLYGKPIRVNKASQD----KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
AI+ LN + G+ R+ + +D KK AN+FI NL D+D K LYDTFS FG
Sbjct: 97 AIEKLNYTPIKGRLCRIMWSQRDPALRKKG---SANIFIKNLHSDIDNKALYDTFSVFGN 153
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
I++ KI D +TG S+GFGF+ ++ A+ AI+A+NG L ++I V
Sbjct: 154 ILS-SKIATD-ETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFV 200
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 23/206 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ + T+E ELF + G V++ + K L +G+GFV+F + EDA A++ LN
Sbjct: 224 YVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKL-KGFGFVDFENHEDAAKAVEELN 282
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+ + + V++A + KK + G NLFI NLD +D++ L +
Sbjct: 283 GSQFKDQELFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFIKNLDDSIDDEKLKE 342
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ ++MR + G SRGFGF+ + + E + AI N Q + + + V+ A
Sbjct: 343 EFAPYGNI-TSVRVMR-TENGKSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 400
Query: 191 KKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 401 RKDV---RRSQLAQQIQARNQMRYQQ 423
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A ++ NL + + L++ F G +++ + D T +G+GFV F + A AI
Sbjct: 128 ANIFIKNLHSDIDNKALYDTFSVFGNILSSKIATDE-TGKSKGFGFVHFEDDTAAKEAID 186
Query: 85 VLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
LN + L G+ I R + SQ ++S N+++ N++ + ++ + FS +G
Sbjct: 187 ALNGMLLNGQEIFVGPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFTELFSKYGK 246
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+++ + + G +GFGF+ +++ E + A+E +NG ++++ VS A KK
Sbjct: 247 VLSAA--LEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQKK 299
>gi|299473651|emb|CBN78045.1| poly(A) binding protein [Ectocarpus siliculosus]
Length = 688
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
A+ YVG+L V E L+E+F Q GPV ++ V +D VT GY +V F + DA+ A
Sbjct: 40 HSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERA 99
Query: 83 IKVLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ +N + + R+ + +D + VG N+F+ NLD VD K LYDTFS FG I++
Sbjct: 100 LDTMNFTTIKDQACRIMWSQRDPSLRRSGVG-NIFVKNLDETVDNKALYDTFSLFGNILS 158
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ D D G S+G+G++ Y+ +++ AI +NG + +Q+ V + ++D +
Sbjct: 159 -CKVATD-DAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNR 211
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 27/154 (17%)
Query: 66 QGYGFVEFRSEEDADYAIKVLN---------MIKLYGKPIRVNKASQDKKSLDV------ 110
+G+GFV F E A AI+ LN LY R K S+ + L
Sbjct: 273 RGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLY--CARAQKKSERARELQSKHDQVK 330
Query: 111 --------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGN-SRGFGFISY 161
G N+++ NLD V E + + F+ +G I T+ ++M D N S+GFGF+ +
Sbjct: 331 MERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTI-TSARVMVDNSNNNQSKGFGFVCF 389
Query: 162 DSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ E + AI MNG+ L N+ I V+ A +++ +
Sbjct: 390 SAPEEATKAITEMNGKMLLNKPIYVALAQRREVR 423
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 29/203 (14%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ +V NLD V + L++ F G +++ V D +GYG+V +
Sbjct: 123 SLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGE-SKGYGYVHYEGGV 181
Query: 78 DADYAIKVLNMIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
A+ AI +N + + GK + V N+A Q + NL++ L D+ L +
Sbjct: 182 SANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWT-----NLYVKGLPSSWDDAKLRE 236
Query: 131 TFSAFGVIVTNPKIMRDPDTGNS--------------RGFGFISYDSFEASDAAIEAMNG 176
F G VT+ K+ P G RGFGF++++ E++ AIEA+N
Sbjct: 237 EFEKHGA-VTSCKVQVAPQEGQGDESKEKGKGGEGKSRGFGFVNFEEHESAVKAIEALNN 295
Query: 177 QYLCNRQITVS-YAYKKDTKGER 198
+ + + T + Y + K ER
Sbjct: 296 AEMPDGEGTTTLYCARAQKKSER 318
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH-QGYGFVEFRSEEDADY 81
Q YV NLD VTE+ + E F G + + V D N +G+GFV F + E+A
Sbjct: 338 QGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATK 397
Query: 82 AIKVLNMIKLYGKPIRV 98
AI +N L KPI V
Sbjct: 398 AITEMNGKMLLNKPIYV 414
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALYDTFSTFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K ++ ER
Sbjct: 128 CKVA--CDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH-FK--SRREREAE 182
Query: 202 PAERILAANN 211
R L N
Sbjct: 183 LGARALEFTN 192
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQQAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 220 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 131 TFSAFGVIVTNPK 143
FS +GVI + K
Sbjct: 313 EFSPYGVITSAKK 325
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 108/175 (61%), Gaps = 9/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADYAIK 84
Y+GN+ P+VT+++L E+F AGPVV+ + +DR N H G YGFVE+ A+ A+
Sbjct: 16 YIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDR--NFHHGGYNYGFVEYTDMRSAEQALT 73
Query: 85 VLNMIKLYGKPIRVNKASQ---DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN K++ IRVN A Q +++ ++F+G+L P+V++ +L F+ F + +
Sbjct: 74 TLNGRKIFDSEIRVNWAYQGQGNREDTQHHFHVFVGDLSPEVNDDILGKAFAKFASL-SE 132
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
++M D ++G SRG+GF+S+ ++ AI MNG++L +R I V++A +K G
Sbjct: 133 ARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVNWANQKTQTG 187
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+V +++L + F + + V D + +GYGF+ FR + DA+ AI +N
Sbjct: 107 FVGDLSPEVNDDILGKAFAKFASLSEARVMWDMNSGKSRGYGFLSFRDKADAEQAIATMN 166
Query: 88 MIKLYGKPIRVNKASQD-----KKSLDVG--------------------ANLFIGNLDPD 122
L + IRVN A+Q +SL +G +++GNL P
Sbjct: 167 GEWLGSRAIRVNWANQKTQTGGSRSLGLGQGFNGPLTFEQVAAQTPDYNTTVYVGNLIPY 226
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
+ L F +G IV +I D RGF F+ D+ + +I ++ Q + R
Sbjct: 227 TTQADLIPLFQNYGYIV---EIRMQAD----RGFAFVKLDTHANAALSITSLQNQLVHGR 279
Query: 183 QITVSYA 189
I S+
Sbjct: 280 PIKCSWG 286
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T YVGNL P T+ L LF G +V + + DR G+ FV+ + +A +I
Sbjct: 215 NTTVYVGNLIPYTTQADLIPLFQNYGYIVEIRMQADR------GFAFVKLDTHANAALSI 268
Query: 84 KVLNMIKLYGKPIRVNKASQDKKS 107
L ++G+PI+ + +D++S
Sbjct: 269 TSLQNQLVHGRPIKCSWG-KDRQS 291
>gi|156846854|ref|XP_001646313.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
gi|156116988|gb|EDO18455.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
Length = 580
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 106/181 (58%), Gaps = 4/181 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E LL+++F GPV ++ V +D VT GY +V F + AI+
Sbjct: 51 ASLYVGELDPSVSEALLYDIFSPIGPVSSIRVCRDAVTKTSLGYAYVNFNDHDSGKVAIE 110
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G+ N+FI NL D+D K L+DTFS FG I++ K
Sbjct: 111 KLNYTPIKGKPCRIMWSQRDPSMRKNGSGNIFIKNLHADIDNKALHDTFSVFGNILS-CK 169
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGERHGTP 202
I D +TG S+GFGF+ ++ A+ AI+A+NG L ++ V ++ +KD + +
Sbjct: 170 IATD-ETGKSKGFGFVHFEEDTAASEAIDAINGMMLNGLEVYVAAHVSRKDRESKFEAAK 228
Query: 203 A 203
A
Sbjct: 229 A 229
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D + TEE ELF + GP+ ++ + KD +G+GFV + + E A A+ LN
Sbjct: 235 YVKNVDLEATEEEFEELFKKFGPITSISMEKDSEGKF-RGFGFVNYENHESAAKAVDELN 293
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYD 130
++ + + V +A + + L G NLF+ NLD +D++LL
Sbjct: 294 DLEFKSQKLYVGRAQKKYERLQELKKQYEEAKLEKMAKYQGVNLFVKNLDDTIDDELLKK 353
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F +FG I T+ K+MR+ +TG S+GFGF+ + S E + AI N Q + + + V+ A
Sbjct: 354 EFESFGTI-TSVKVMRN-ETGKSKGFGFVCFSSPEEATRAITEKNQQIVAGKPLYVALAQ 411
Query: 191 KKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 412 RKDV---RRSQLAQQIQARNQMRYQQ 434
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S +N ++ NL + + L + F G +++ + D T +G+GFV F +
Sbjct: 132 SMRKNGSGNIFIKNLHADIDNKALHDTFSVFGNILSCKIATDE-TGKSKGFGFVHFEEDT 190
Query: 78 DADYAIKVLNMIKLYGKPIRV--NKASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYD 130
A AI +N + L G + V + + +D++S A N+++ N+D + E+ +
Sbjct: 191 AASEAIDAINGMMLNGLEVYVAAHVSRKDRESKFEAAKANFTNVYVKNVDLEATEEEFEE 250
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ + +D + G RGFGF++Y++ E++ A++ +N ++++ V A
Sbjct: 251 LFKKFGPI-TSISMEKDSE-GKFRGFGFVNYENHESAAKAVDELNDLEFKSQKLYVGRAQ 308
Query: 191 KK 192
KK
Sbjct: 309 KK 310
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q +V NLD + +ELL + F G + +V V ++ T +G+GFV F S E+A
Sbjct: 331 KYQGVNLFVKNLDDTIDDELLKKEFESFGTITSVKVMRNE-TGKSKGFGFVCFSSPEEAT 389
Query: 81 YAIKVLNMIKLYGKPIRV 98
AI N + GKP+ V
Sbjct: 390 RAITEKNQQIVAGKPLYV 407
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG---YGFVEFRSEEDADY 81
A YVGNL P+VTE +L E+F AG V +V + DR N G YGFVE+ A+
Sbjct: 15 AHLYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDR--NFSHGGLNYGFVEYTDMRAAET 72
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVI 138
A++ LN K++ IRVN A Q + N +F+G+L P+V++++L FS F I
Sbjct: 73 ALQTLNGRKIFDTEIRVNWAYQGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSGFKSI 132
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ ++M D +TG SRG+GF+S+ ++ AI MNG++L +R I V++A +K G
Sbjct: 133 -SDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNWANQKTQTGSH 191
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 35/190 (18%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+VG+L P+V +E+L + F + + V D T +GYGF+ FR + DA+ AI +
Sbjct: 108 VFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTM 167
Query: 87 NMIKLYGKPIRVNKASQDKKSLDVGAN----------------------------LFIGN 118
N L + IRVN A+Q ++ N ++IGN
Sbjct: 168 NGEWLGSRAIRVNWANQKTQTGSHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTVYIGN 227
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
L P + L F AFG I+ ++ D RGF F+ DS E + AI + G
Sbjct: 228 LTPYTTQADLVPIFQAFGYII---EVRMQAD----RGFAFVKLDSHENASMAIVQLQGTL 280
Query: 179 LCNRQITVSY 188
+ R I S+
Sbjct: 281 IQGRPIKCSW 290
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T Y+GNL P T+ L +F G ++ V + DR G+ FV+ S E+A AI
Sbjct: 220 NTTVYIGNLTPYTTQADLVPIFQAFGYIIEVRMQADR------GFAFVKLDSHENASMAI 273
Query: 84 KVLNMIKLYGKPIRVN 99
L + G+PI+ +
Sbjct: 274 VQLQGTLIQGRPIKCS 289
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 113/198 (57%), Gaps = 8/198 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVT+ LL E+F GPV + + ++ +GFV++ A AI
Sbjct: 78 SVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRSAALAIVS 133
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN +L+G+PI+VN A + D N+F+G+L P+V + L+ FSA+ ++ +
Sbjct: 134 LNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAALFAFFSAYST-CSDAR 192
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGTP 202
+M D TG SRGFGF+S+ + + + AI +NG++L NRQI ++A K G E+ T
Sbjct: 193 VMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKWLGNRQIRCNWATKGANAGEEKQNTD 252
Query: 203 AERILAANNPSSQKSRPH 220
++ ++ N SS+ + +
Sbjct: 253 SKGMVELINGSSEAGKEN 270
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 41/199 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ L+ F + V D+ T +G+GFV FR+++DA AI LN
Sbjct: 165 FVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELN 224
Query: 88 MIKLYGKPIRVN------KASQDKKSLDVGA----------------------------N 113
L + IR N A ++K++ D
Sbjct: 225 GKWLGNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDGPENNPQYTT 284
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GNL D++ ++ F G + ++ RD +GFGF+ Y + E + AI+
Sbjct: 285 VYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRD------KGFGFVRYSTHEEAALAIQ 338
Query: 173 AMNGQYLCNRQITVSYAYK 191
NGQ + RQI S+ K
Sbjct: 339 TGNGQLVGGRQIKCSWGSK 357
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 103/164 (62%), Gaps = 7/164 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L VTE +L+E+F GPV ++ V +D VT GY +V ++ +DA+ ++
Sbjct: 84 SLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDT 143
Query: 86 LNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN + G+P R+ +D +KS + N+F+ NLD ++D K LYDTFS FG I++
Sbjct: 144 LNYTVIKGQPCRIMWCHRDPSLRKSGN--GNIFVKNLDKNIDNKALYDTFSLFGNILS-C 200
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D D G+S+G+GF+ Y++ E++ +AI+ +NG + + + V
Sbjct: 201 KVAVD-DNGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYV 243
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 18/217 (8%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH-QGYGFVEFRSE 76
S ++ + +V NLD + + L++ F G +++ V D N H +GYGFV + +E
Sbjct: 164 SLRKSGNGNIFVKNLDKNIDNKALYDTFSLFGNILSCKVAVD--DNGHSKGYGFVHYENE 221
Query: 77 EDADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNL-DPDVDEKLLYDT 131
E A AI +N + + GK + V +A +D + N++I N+ DE L +T
Sbjct: 222 ESARSAIDKVNGMLIGGKTVYVGPFIRRAERDNLAEAKYTNVYIKNMPSAWEDESRLRET 281
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN----RQITVS 187
FS FG I T+ + +DP R F F ++ +++ AA+EA+NG+ + + ++ S
Sbjct: 282 FSKFGSI-TSLVVRKDP---KGRLFAFCNFADHDSAKAAVEALNGKRVTDAGAIKEGEDS 337
Query: 188 YAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFA 224
A +K+ +G++ ++IL S+ R L A
Sbjct: 338 GAEEKEEEGQKR--EGDQILFVGPHQSKAHRSAMLRA 372
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 53/228 (23%)
Query: 19 AERNQDATA-----YVGNL-DPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVE 72
AER+ A A Y+ N+ E L E F + G + ++ V KD L + F
Sbjct: 250 AERDNLAEAKYTNVYIKNMPSAWEDESRLRETFSKFGSITSLVVRKDPKGRL---FAFCN 306
Query: 73 FRSEEDADYAIKVLNMIKLY------------------------GKPI------------ 96
F + A A++ LN ++ G I
Sbjct: 307 FADHDSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKEEEGQKREGDQILFVGPHQSKAHR 366
Query: 97 ------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
+ + +QD+ G NL+I N+D +D++ L F FG I T+ K+MRD +
Sbjct: 367 SAMLRAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSI-TSAKVMRD-ER 424
Query: 151 GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
G SR FGF+ + S E + A+ M+ + + + + V A +++ + R
Sbjct: 425 GVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRLMR 472
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q +R Q Y+ N+D + +E L +LF G + + V +D + + +GFV F
Sbjct: 377 MNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAKVMRDE-RGVSRCFGFVCF 435
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
S E+A A+ +++ + GKP+ V A + ++ L
Sbjct: 436 MSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRL 470
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E+F G ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I+++
Sbjct: 71 TMNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + SRGFGF+ +++ EA+ AI MNG L +R++ V + +K K E
Sbjct: 131 VYNEH---GSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGH-FKSRQKRE 180
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 15/174 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH--QGYGFVEFRSEEDADYAIKV 85
++ NL+ + + L++ F G +++ V V N H +G+GFV F + E A AI
Sbjct: 102 FIKNLENSIDNKALYDTFSTFGSILSSKV----VYNEHGSRGFGFVHFETHEAAQKAINT 157
Query: 86 LNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L + + V S+ K+ ++GA N+++ NL D+DE+ L D FS FG
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLRVDMDEQGLQDLFSQFGK- 216
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRD + G SRGFGFI+++ E + A++ MNG+ + + + V A K+
Sbjct: 217 TQSVKVMRDSN-GQSRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL + E+ L +LF Q G +V V +D +G+GF+ F E+A A+ +N
Sbjct: 194 YVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDS-NGQSRGFGFINFEKHEEAQKAVDHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A Q++++ G NL++ NLD +++ L +
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDRLKE 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M ++ +S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 VFSTYGVI-TSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q R Q YV NLD + ++ L E+F G + + V + ++ +G+GFV F
Sbjct: 283 MKQERQNRYQGVNLYVKNLDDSINDDRLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCF 340
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDV 123
S E+A A+ +N + KP+ V A + ++ + N + L V
Sbjct: 341 SSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRRLSRSV 390
>gi|307095208|gb|ADN29910.1| poly A binding protein cytoplasmic 1 isoform 1-like protein
[Triatoma matogrossensis]
Length = 341
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 110/165 (66%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VT+ +L+E F AGPV+++ V KD +T GY +V F+ DA+ A+
Sbjct: 13 ASLYVGDLHSDVTKAMLFEKFSSAGPVLSIRVCKDMITRRSLGYAYVNFQQPADAERALD 72
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G+PIR+ + +D +KS VG N+FI NLD ++D K +YDTFSAFG I++
Sbjct: 73 TMNFDTLKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKNIDNKAMYDTFSAFGNILS- 129
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D ++G+S+G+GF+ +++ EA+ +I+ +NG L +++ V
Sbjct: 130 CKVAQD-ESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVFV 173
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + +++ F G +++ V +D + +GYGFV F +EE A +I +
Sbjct: 103 VFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDE-SGSSKGYGFVHFETEEAATKSIDKV 161
Query: 87 NMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYDTFSAFGVIV 139
N + L GK + V K + +K L A LF + N D + +L + F +G I
Sbjct: 162 NGMLLNGKKVFVGKFIPRKEREKELGEKAKLFTNVYVKNFGEDFTDDMLKEMFEKYGPIT 221
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN-RQITVSYAYKK 192
++ ++ SRGFGF++++ EA++ A+E +NG+ + +Q+ V A KK
Sbjct: 222 SHTVVVNKDQ--KSRGFGFVAFEDPEAAERAVEDLNGKEIIEGKQLYVGRAQKK 273
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 26/154 (16%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
YV N T+++L E+F + GP+ + V V KD+ + +G+GFV F E A+ A
Sbjct: 194 TNVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKS---RGFGFVAFEDPEAAERA 250
Query: 83 IKVLNMIKLY-GKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVD 124
++ LN ++ GK + V +A + K+ + G NL++ NLD +D
Sbjct: 251 VEDLNGKEIIEGKQLYVGRAQKKAERQQELKRKFEQLKMERMNRYQGVNLYVKNLDDTID 310
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGF 158
++ L FS FG I T+ K+M + S+GFGF
Sbjct: 311 DERLRKEFSPFGTI-TSAKVMLEER--RSKGFGF 341
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L++ F + VV+V V +D TN GYG+V + + +DA+ A++
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L GK IR+ +S+D + G NLF+ NLD VD K L++ FS G IV+ K
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVS-CK 164
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D G SRG+GF+ +D+ +++ AIE +NG+ L ++QI V
Sbjct: 165 VATD-HMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFV 206
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 26/264 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD V + L E F G +V+ V D + +GYGFV+F +E+ A AI+ LN
Sbjct: 137 FVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQ-SRGYGFVQFDTEDSAKNAIEKLN 195
Query: 88 MIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
L K I V +++ DK N+++ NL + L TF +G I
Sbjct: 196 GKVLNDKQIFVGPFLRKEERESAADKMKF---TNVYVKNLSEATTDDELKTTFGQYGSI- 251
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++ +MRD D G SR FGF+++++ E + A+EA+NG+ +++ V A KK ER
Sbjct: 252 SSAVVMRDGD-GKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKS---ERE 307
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPIS 259
+ R ++ K L+ + TV +A
Sbjct: 308 LELSRRYEQGSSDGGNKFDGLNLY---------VKNLDDTVTDEKLRELFAEFGTITSCK 358
Query: 260 AVRPPPPPPQAAAFPPMQVAGQAA 283
+R P + + F A +A+
Sbjct: 359 VMRDPSGTSKGSGFVAFSAASEAS 382
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 20/197 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ + YV NL T++ L F Q G + + V +D + +GFV F +
Sbjct: 216 ESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDG-DGKSRCFGFVNFEN 274
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGN 118
EDA A++ LN K K V KA + ++ L++ G NL++ N
Sbjct: 275 PEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKN 334
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD V ++ L + F+ FG I T+ K+MRDP +G S+G GF+++ + + + MNG+
Sbjct: 335 LDDTVTDEKLRELFAEFGTI-TSCKVMRDP-SGTSKGSGFVAFSAASEASRVLNEMNGKM 392
Query: 179 LCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 393 VGGKPLYVALAQRKEER 409
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L++ F + VV+V V +D TN GYG+V + + +DA+ A++
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQ 105
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L GK IR+ +S+D + G NLF+ NLD VD K L++ FS G IV+ K
Sbjct: 106 KLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVS-CK 164
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D G SRG+GF+ +D+ +++ AIE +NG+ L ++QI V
Sbjct: 165 VATD-HMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFV 206
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 26/264 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD V + L E F G +V+ V D + +GYGFV+F +E+ A AI+ LN
Sbjct: 137 FVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQ-SRGYGFVQFDTEDSAKNAIEKLN 195
Query: 88 MIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
L K I V +++ DK N+++ NL + L TF +G I
Sbjct: 196 GKVLNDKQIFVGPFLRKEERESAADKMKF---TNVYVKNLSEATTDDELKTTFGQYGSI- 251
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
++ +MRD D G SR FGF+++++ E + A+EA+NG+ +++ V A KK ER
Sbjct: 252 SSAVVMRDGD-GKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKS---ERE 307
Query: 200 GTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPIS 259
+ R ++ K L+ + TV +A
Sbjct: 308 LELSRRYEQGSSDGGNKFDGLNLY---------VKNLDDTVTDEKLRELFAEFGTITSCK 358
Query: 260 AVRPPPPPPQAAAFPPMQVAGQAA 283
+R P + + F A +A+
Sbjct: 359 VMRDPSGTSKGSGFVAFSAASEAS 382
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 20/197 (10%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ +A++ + YV NL T++ L F Q G + + V +D + +GFV F +
Sbjct: 216 ESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDG-DGKSRCFGFVNFEN 274
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANLFIGN 118
EDA A++ LN K K V KA + ++ L++ G NL++ N
Sbjct: 275 PEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKN 334
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD V ++ L + F+ FG I T+ K+MRDP +G S+G GF+++ + + + MNG+
Sbjct: 335 LDDTVTDEKLRELFAEFGTI-TSCKVMRDP-SGTSKGSGFVAFSAASEASRVLNEMNGKM 392
Query: 179 LCNRQITVSYAYKKDTK 195
+ + + V+ A +K+ +
Sbjct: 393 VGGKPLYVALAQRKEER 409
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 111/172 (64%), Gaps = 3/172 (1%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
SA R ++++ YVG+L V + L++LF Q PV++V V +D++T GYG+V + +
Sbjct: 18 SAGRFENSSLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNAR 77
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFG 136
DA A++ LN + L GKPIR+ + +D G ANLFI NL+ +D K L++TFS FG
Sbjct: 78 DAANAMENLNYVPLNGKPIRIMFSHRDPLIRKTGFANLFIKNLETSIDNKALHETFSVFG 137
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+++ K+ D + G+S+G GF+ +D+ +++ AIE ++G+ + ++++ V Y
Sbjct: 138 NVLS-CKVAMDSN-GHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDKKVYVGY 187
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 21/189 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV NL T E L +LF G + +V + KD N + +GFV F+S + A A++
Sbjct: 200 TNVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGN-SKRFGFVNFQSSDSAATAVE 258
Query: 85 VLN-MIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEK 126
LN GK + R K S+ + L GANL++ N+D ++E+
Sbjct: 259 KLNGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLKNIDKSLNEE 318
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + FS FG I T+ K+M D G S+G GF+++ + E + AI+ MNG+ + + + V
Sbjct: 319 KLKELFSEFGTI-TSCKVMSDA-RGRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYV 376
Query: 187 SYAYKKDTK 195
S A +K+ +
Sbjct: 377 SVAQRKEER 385
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
E+ Q A Y+ N+D + EE L ELF + G + + V D +G GFV F + E+A
Sbjct: 299 EKFQGANLYLKNIDKSLNEEKLKELFSEFGTITSCKVMSD-ARGRSKGVGFVAFTTPEEA 357
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQDKK 106
AI +N + KP+ V+ A + ++
Sbjct: 358 SKAIDEMNGKIIGQKPVYVSVAQRKEE 384
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 112/190 (58%), Gaps = 11/190 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E F GP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 SSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NVFIKNLEDSIDSKALYDTFSTFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ D SRGFGF+ +++ EA+ AI MNG L +R++ V + +K + ER
Sbjct: 128 CKVACDEH--GSRGFGFVHFETNEAAQQAISTMNGMLLNDRKVFVGH-FK--SHREREAE 182
Query: 202 PAERILAANN 211
+ LA N
Sbjct: 183 LGAQALAFTN 192
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 103/186 (55%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 102 FIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETNEAAQQAISTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S ++ ++GA N+++ NL D+DE+ L D F FG +++
Sbjct: 160 GMLLNDRKVFVGHFKSHREREAELGAQALAFTNIYVKNLHVDMDEQGLQDLFFEFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SRGFGF++++ E + A++ MNG+ + +Q+ V A K +GER
Sbjct: 220 -VKVMRD-NSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQK---RGERQN 274
Query: 201 TPAERI 206
R
Sbjct: 275 ELKRRF 280
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 34/264 (12%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL + E+ L +LF + G +++V V +D + +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDN-SGHSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+++ G NL++ NLD + ++ L
Sbjct: 253 GKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQTRYQGVNLYVKNLDDSISDEKLRT 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG + + + V+ A
Sbjct: 313 VFSPYGVI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQ 369
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
+K+ ER N Q R T+ A G P + + Q N P +P A
Sbjct: 370 RKE----------ERKAILTNQYMQ--RLSTVQALGRPVMGSFQQPNSYF-LPAVAQPPA 416
Query: 251 NGAASGPISAVRPPPPPPQAAAFP 274
G +V P P P+ A P
Sbjct: 417 QATCYGGSGSVAPVQPAPRWTAQP 440
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 20 ERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
E NQ T YVG+LDP V+E L+++F G V ++ V +D +T GY +V F
Sbjct: 26 EENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFND 85
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSA 134
+ A AI+ LN + GK R+ + +D GA N+FI NL PD+D K LYDTFS
Sbjct: 86 HDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSV 145
Query: 135 FGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
FG I+++ K+ D +TG S+GFG++ ++ E++ AI+A+NG L ++I V
Sbjct: 146 FGNILSS-KVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYV 195
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRV-TNLHQGYGFVEFRSEEDADYAI 83
Y+ N++ + T++ EL + G +V + +R ++G+GFV F + EDA +
Sbjct: 216 TNVYIKNINTETTDKEFEELVAKFGKTDSVVL--ERTPEGENKGFGFVNFVNHEDAVKCV 273
Query: 84 KVLNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEK 126
+ LN + G+P+ VN+A + KK + G NLFI NLD +D+K
Sbjct: 274 EELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDK 333
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + F+ +G I T+ K+M + G S+GFGF+ + + E + AI N Q + + + V
Sbjct: 334 KLEEEFAPYGTI-TSAKVMT-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 391
Query: 187 SYAYKKDTKGERHGTPAERILAANNPSSQK 216
+ A +KD R A++I A N Q+
Sbjct: 392 AIAQRKDV---RRSQLAQQIQARNQMRFQQ 418
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 101 ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFIS 160
+++ +S V A+L++G+LDP V E LYD FS G V++ ++ RD T S G+ +++
Sbjct: 24 TNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGA-VSSIRVCRDAITKTSLGYAYVN 82
Query: 161 YDSFEASDAAIEAMN 175
++ +A+ AIE +N
Sbjct: 83 FNDHDAAKTAIEKLN 97
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 101/167 (60%), Gaps = 8/167 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE LL+E F GP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 ASLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEMIKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEASIDNKALYDTFSTFGNILS- 127
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
K+ D SRGFGF+ +++ EA+ AI MNG L + ++ V +
Sbjct: 128 CKVA--CDEHGSRGFGFVHFETHEAAQHAINTMNGMLLNDHKVFVGH 172
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 145/328 (44%), Gaps = 81/328 (24%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L ELF Q G +++V V +D + +G+GFV F + E+A A+ +N
Sbjct: 194 YVKNLQADVDEQGLQELFSQFGKMLSVKVMRDS-SGHSRGFGFVNFETHEEAQKAVVHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+ + G NL++ NLD +D++ L
Sbjct: 253 GKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNLDDSIDDEKLRK 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +G+I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 EFSPYGMI-TSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA 250
+K+ ER N Q R T+ A G P L
Sbjct: 370 RKE----------ERKAILTNQYMQ--RLSTMRALGSPFL-------------------- 397
Query: 251 NGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPPP 310
G+ P S P P P GQAA+ G MPPP +P P
Sbjct: 398 -GSFQQPTSYFLPAVPQP----------PGQAAYYGSSS----------MPPP---QPAP 433
Query: 311 NMPPPPPPQLASAMQRPPPQPMGMGAQP 338
PP +++M RPP GM +P
Sbjct: 434 RWTSQPPRSSSASMVRPP----GMSRRP 457
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 100/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A +AI +N
Sbjct: 102 FIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETHEAAQHAINTMN 159
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + V S+ ++ +++GA N+++ NL DVDE+ L + FS FG +++
Sbjct: 160 GMLLNDHKVFVGHFKSRREREVELGARAMEFTNIYVKNLQADVDEQGLQELFSQFGKMLS 219
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRD +G+SRGFGF+++++ E + A+ MNG+ + R + V A K+
Sbjct: 220 -VKVMRD-SSGHSRGFGFVNFETHEEAQKAVVHMNGKEVSGRLLYVGRAQKR 269
>gi|402585898|gb|EJW79837.1| Poly(A) binding protein [Wuchereria bancrofti]
Length = 175
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 97/149 (65%), Gaps = 3/149 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N +YGKPIR+ + +D GA N+FI NLD +D K +YDTFS FG I++ K
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFGNILS-CK 136
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+ D ++ NS+G+GF+ +++ E++ AIE
Sbjct: 137 VANDEES-NSKGYGFVHFETEESAQKAIE 164
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 7/180 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AG V+++ V +D VT GY +V F+ A+ A+
Sbjct: 13 ASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALD 72
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+P R+ +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 73 TMNFDPIKGRPCRIMWQQRDPSLRKS-GVG-NIFIKNLDKSIDNKSLYDTFSAFGNILS- 129
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
KI +D + GN +G+GF+ +++ +A+ AI ++G L ++++ V K + E+ GT
Sbjct: 130 CKIAQD-ELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGT 188
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 105/188 (55%), Gaps = 20/188 (10%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N + +E + E+ +AG +V++ V D +G+GFV F + E+A+ A+
Sbjct: 194 TNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTD-PEGKSKGFGFVSFETPEEAEEAVN 252
Query: 85 VLNMIKLYGKPI-------RVNKASQDKKSLDV----------GANLFIGNLDPDVDEKL 127
VLN ++ G+ + R +A++ K ++ G NL+I NLD +D++
Sbjct: 253 VLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDER 312
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + FS +G I ++ K+M+D D GNS+GFGF+ + S E + A+ MNG+ L ++ + V+
Sbjct: 313 LREEFSPYGTI-SSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVA 370
Query: 188 YAYKKDTK 195
A +++ +
Sbjct: 371 LAQRREER 378
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG L+P + E LL+E+F G V ++ V +D +T GY +V + + +D + AI
Sbjct: 60 ASLYVGELEPSINEALLFEIFSPIGQVSSIRVCRDALTKRSLGYAYVNYHNVKDGEKAID 119
Query: 85 VLNMIKLYGKPIRVNKASQD-KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+PIR+ + +D K + N+FI NL P +D K L+DTFSAFG I++ K
Sbjct: 120 ELNYSVVKGQPIRIMWSQRDPAKRRNGEGNVFIKNLHPAIDNKALHDTFSAFGRILS-CK 178
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + G S+GFGF+ ++S EA+ AAIE +NG L N ++ V
Sbjct: 179 VATD-NFGQSKGFGFVHFESPEAAQAAIENVNGMLLNNNEVYV 220
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D + +EE + ELF G V + Y+ KD +G+ FV + E A +I+ LN
Sbjct: 244 YVKNIDLEASEEEVKELFTPFGTVTSFYLEKD-AEGKSRGFAFVNYEEHEAAVKSIESLN 302
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYD 130
GK + V +A + + L+ G NLF+ NLD +D++ L +
Sbjct: 303 DQDYKGKKLYVGRAQKKSERLEELKKQYEAARIEKLTKSQGVNLFVKNLDDSIDDEKLKE 362
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F +FG I ++ K+M D ++G S+GFGF+S+ S E + AI MN L + + V+ A
Sbjct: 363 EFQSFGTI-SSVKVMID-ESGKSKGFGFVSFSSPEEASRAISEMNQHMLAGKPLYVALAQ 420
Query: 191 KKDTK 195
+KD +
Sbjct: 421 RKDVR 425
>gi|344277245|ref|XP_003410413.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Loxodonta africana]
Length = 602
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 106/182 (58%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE+LL++ F GPV+++ + +D VT GY +V F DA A+
Sbjct: 203 ASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLHVADAQKALD 262
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GK IR+ + +D G N+FI NLD +D K LY+ FS FG I+++ K
Sbjct: 263 TMNFDVIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSTFGKILSS-K 321
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTP 202
+M D D G S+G+ F+ + + A+D AIE MNG L N ++ VS + +KD + E
Sbjct: 322 VMSD-DQG-SKGYAFVHFQNQSAADRAIEEMNGTLLKNCRVFVSRFKSRKDRESELKNKA 379
Query: 203 AE 204
+E
Sbjct: 380 SE 381
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L+E F G +++ V D +GY FV F+++ AD AI+ +
Sbjct: 293 VFIKNLDKSIDNKTLYEHFSTFGKILSSKVMSD--DQGSKGYAFVHFQNQSAADRAIEEM 350
Query: 87 NMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N L + R ++ S+ K N++I N D+D+ L + FS +G +
Sbjct: 351 NGTLLKNCRVFVSRFKSRKDRESELKNKASEFTNVYIKNFGDDMDDMRLKEVFSKYGTTL 410
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D +G S+GFGF+S+ S EA+ A+E MNG+ + + I V A KK
Sbjct: 411 S-VKVMTDS-SGKSKGFGFVSFASHEAAKNAVEEMNGKDINGQLIFVGRAQKK 461
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + + L E+F + G ++V V D + +G+GFV F S E A A++ +
Sbjct: 385 VYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTD-SSGKSKGFGFVSFASHEAAKNAVEEM 443
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N + G+ I V +A Q++ G L+I NLD +D++ L
Sbjct: 444 NGKDINGQLIFVGRAQKKIERQAELKQMFEQLRQERFRRCRGVKLYIKNLDDTIDDEKLR 503
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F++FG I + K+M++ G S+GFG I + S E + A+ MNG+ L ++ + ++ A
Sbjct: 504 KEFASFGSI-SRVKVMQEE--GRSKGFGLICFSSHEEAIKAMTEMNGRILGSKPLNIALA 560
Query: 190 YKKDTK 195
+ + +
Sbjct: 561 QRNEER 566
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q R + Y+ NLD + +E L + F G + V V ++ +G+G + F
Sbjct: 475 LRQERFRRCRGVKLYIKNLDDTIDDEKLRKEFASFGSISRVKVMQE--EGRSKGFGLICF 532
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIG 117
S E+A A+ +N L KP+ + A ++++ N +G
Sbjct: 533 SSHEEAIKAMTEMNGRILGSKPLNIALAQRNEERKTCFDNQXVG 576
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 4/172 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD V E L+ +F Q G V +V V +D VT GYG+V + S DA A++
Sbjct: 38 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 97
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GK IR+ + +D + G N+FI NLD +D K L+DTF AFG I++
Sbjct: 98 ALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI 157
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+D G S+G+GF+ +++ EA++ AIE +NG L +++ V+ K+ +
Sbjct: 158 AHQD---GRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDR 206
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 9/180 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ NLD + + L + F+ GP+++ + +GYGFV F ++E
Sbjct: 119 STRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKIAHQ--DGRSKGYGFVHFETDE 176
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-----ANLFIGNLDPDVDEKLLYDTF 132
A+ AI+ +N ++L GK + V K + L N+F+ NLDP++ E+ + + F
Sbjct: 177 AANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEIKEHF 236
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
S FGVI TN IM+D + S+GFGF+++D EA+ AA+E MN L +R I V A KK
Sbjct: 237 STFGVI-TNVVIMKD-ENDKSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKK 294
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 22/187 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V NLDP++ EE + E F G + NV + KD + +G+GFV F E A A++ +
Sbjct: 218 VFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDE-NDKSKGFGFVNFDDPEAARAAVETM 276
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLY 129
N +L + I V +A + + + GANL++ NLD +D++ L
Sbjct: 277 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 336
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDS-FEASDAAIEAMNGQYLCNRQITVSY 188
FS +G I T+ K+MRD + G S+GFGF+ + S EAS AA E NG + + I V+
Sbjct: 337 QEFSRYGNI-TSAKVMRD-EKGISKGFGFVCFTSPEEASRAATET-NGLMINGKPIYVAM 393
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 394 AQRKEIR 400
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G +L++G+LD V E L+ FS G +VT+ ++ RD T S G+G+++Y S + A
Sbjct: 37 GVSLYVGDLDETVAETQLFTIFSQMG-LVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRA 95
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGP 227
+EA+N + + I + +++ +D + G I + K+ T A GP
Sbjct: 96 MEALNYTPINGKTIRIMWSH-RDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGP 151
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+LD V + L+++F Q G VV+V V +D + GY +V + + DA A+++
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALEM 185
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + G+PIR+ +++D G AN+FI NLD +D K L+DTF FG I++ K+
Sbjct: 186 LNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALHDTFCVFGNILS-CKV 244
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
DP G S+G+GF+ Y+ EA+ AAIE +NG + ++++ V
Sbjct: 245 ATDP-AGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYV 285
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL TE+ L E+F + G + +V V +D + +GFV F S ++A A++ LN
Sbjct: 307 YVKNLAETTTEDDLKEIFGKFGTITSVVVMRDG-DGRSKCFGFVNFESPDEAALAVQDLN 365
Query: 88 MIKLYGKPIRVNKASQD-----------KKSLDVGA------NLFIGNLDPDVDEKLLYD 130
K K V +A + +K+L A NL++ NLD VD++ L +
Sbjct: 366 GKKFSDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDTVDDEKLRE 425
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ K+MRD + G SRG GF+++ S + + A+ MN + + N+ + V+ A
Sbjct: 426 LFAEFGTI-TSCKVMRDSN-GASRGSGFVAFKSADDASRALAEMNNKMVGNKPLYVALAQ 483
Query: 191 KKDTKGER 198
+K+ + R
Sbjct: 484 RKEDRKAR 491
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q +A++ Q+ Y+ NLD V +E L ELF + G + + V +D +G GFV F+S
Sbjct: 398 QEAADKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDS-NGASRGSGFVAFKS 456
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
+DA A+ +N + KP+ V A +D+K+
Sbjct: 457 ADDASRALAEMNNKMVGNKPLYVALAQRKEDRKA 490
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+LD V + L+D F+ G +V+ ++ RD + S G+ +++Y++ + A+E
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVS-VRVCRDVTSRKSLGYAYVNYNTPADAARALE 184
Query: 173 AMNGQYLCNRQITVSYAYK 191
+N + R I + Y+ +
Sbjct: 185 MLNFTPINGRPIRIMYSNR 203
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 101/167 (60%), Gaps = 8/167 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E F GP++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 SSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NL+ +D K LYDTFS FG I++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKS-GVG-NVFIKNLEDSIDSKALYDTFSTFGNILSC 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
D SRGFGF+ +++ EA+ AI MNG L +R++ V +
Sbjct: 129 KVAC---DEHGSRGFGFVHFETNEAAQQAIGTMNGMLLNDRKVFVGH 172
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +
Sbjct: 101 VFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGS--RGFGFVHFETNEAAQQAIGTM 158
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L + + V SQ ++ ++GA N+++ NL D+DE+ L D F AFG ++
Sbjct: 159 NGMLLNDRKVFVGHFKSQREREAELGAQALEFTNIYVKNLSVDMDEQGLQDLFFAFGNML 218
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRD ++G+SRGFGF++++ E + A++ MNG+ + +Q+ V A K+
Sbjct: 219 S-VKVMRD-NSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKR 269
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL + E+ L +LF G +++V V +D + +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDN-SGHSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A QD+++ G NL++ NLD + ++ L
Sbjct: 253 GKEVSGQQLYVGRAQKRAERQNELKRRFEQLKQDRQTRYRGVNLYVKNLDDSISDEKLRT 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M + D +S+GFGF+ + S E + A+ MNG + + + V+ A
Sbjct: 313 VFSPYGVI-TSAKVMTEGD--HSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
>gi|289742137|gb|ADD19816.1| polyA-binding protein [Glossina morsitans morsitans]
Length = 653
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L + E L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSNAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N L KPIR+ + +D G N+FI NLD +D K +YDTFSAFG I++ K
Sbjct: 62 TMNFDLLRNKPIRIMWSQRDPSLRRSGIGNVFIKNLDKTIDNKAIYDTFSAFGNILS-CK 120
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D D G S+G+GF+ +++ EA++ AIE +NG L +++ V
Sbjct: 121 VATD-DKGTSKGYGFVHFETEEAANNAIEKVNGMLLNGKKVYV 162
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V D +GYGFV F +EE
Sbjct: 83 SLRRSGIGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVATDD-KGTSKGYGFVHFETEE 141
Query: 78 DADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVG------ANLFIGNLDPDVDEKLLYD 130
A+ AI+ +N + L GK + V K + ++ D+G N+++ N DVD++ L +
Sbjct: 142 AANNAIEKVNGMLLNGKKVYVGKFIPRKEREKDLGEKAKLFTNVYVKNFGDDVDDEKLKE 201
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN-RQITVSYA 189
F +G I T+ K+M D G S+ FGF+++++ EA++AA+EA+NG+ + + + + V+ A
Sbjct: 202 MFDPYGKI-TSYKVMIKED-GKSKCFGFVAFETTEAAEAAVEALNGKDMGDGKALYVARA 259
Query: 190 YKK 192
KK
Sbjct: 260 QKK 262
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 25/189 (13%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N V +E L E+F G + + V + +D + +GFV F + E A+ A++
Sbjct: 185 VYVKNFGDDVDDEKLKEMFDPYGKITSYKVMIKEDGKSKC---FGFVAFETTEAAEAAVE 241
Query: 85 VLNMIKL-YGKPIRVNKASQD-------KKSLD----------VGANLFIGNLDPDVDEK 126
LN + GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 242 ALNGKDMGDGKALYVARAQKKAERQQELKRKFEELKKKRQESVYGVNLYVKNLDDTIDDE 301
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L FS FG I T+ K+M D D G S+GFGF+ + + + A+ MNG+ + ++ + V
Sbjct: 302 RLRKEFSLFGTI-TSAKVMTDED-GRSKGFGFVCFVAPHEATCAVTEMNGRVVGSKPLYV 359
Query: 187 SYAYKKDTK 195
+ A +K+ +
Sbjct: 360 ALAQRKEDR 368
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P VTE +L+E+F G ++++ V +D T GY ++ F+ DA+ A+
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I+++
Sbjct: 71 TMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ + SRGFGF+ +++ EA+ AI MNG L +R++ V + +K K E
Sbjct: 131 VYNEH---GSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGH-FKSRQKRE 180
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH--QGYGFVEFRSEEDADYAIKV 85
++ NL+ + + L++ F G +++ V V N H +G+GFV F + E A AI
Sbjct: 102 FIKNLENSIDNKALYDTFSTFGSILSSKV----VYNEHGSRGFGFVHFETHEAAQKAINT 157
Query: 86 LNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVI 138
+N + L + + V S+ K+ ++GA N+++ NL +VDE+ L D FS FG +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+MRD + G SRGFGF++++ E + A++ MNG+ + + + V A K+
Sbjct: 218 -QSVKVMRDSN-GQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKR 269
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 101/185 (54%), Gaps = 21/185 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G + +V V +D +G+GFV F E+A A+ +N
Sbjct: 194 YVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDS-NGQSRGFGFVNFEKHEEAQKAVDHMN 252
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + V +A Q++++ G NL++ NLD ++++ L +
Sbjct: 253 GKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLKE 312
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS +GVI T+ K+M ++ +S+GFGF+ + S E + A+ MNG+ + + + V+ A
Sbjct: 313 VFSTYGVI-TSAKVM--TESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369
Query: 191 KKDTK 195
+K+ +
Sbjct: 370 RKEER 374
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q R Q YV NLD + +E L E+F G + + V + ++ +G+GFV F
Sbjct: 283 MKQERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCF 340
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLF 115
S E+A A+ +N + KP+ V A + ++ + N +
Sbjct: 341 SSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 117/204 (57%), Gaps = 9/204 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L VTE +L+E+F GPV ++ V +D VT GY +V ++ +DA+ ++
Sbjct: 85 SLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDT 144
Query: 86 LNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN + G+P R+ +D +KS + N+F+ NLD ++D K LYDTFS FG I++
Sbjct: 145 LNYTVIKGQPCRIMWCHRDPSLRKSGN--GNIFVKNLDKNIDNKALYDTFSLFGNILS-C 201
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D + G+S+G+GF+ Y++ E++ +AI+ +NG + + + V ++ + T
Sbjct: 202 KVAVD-ENGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPFIRRAERDNLAETK 260
Query: 203 AERILAANNPSS--QKSRPHTLFA 224
+ N PS+ ++R FA
Sbjct: 261 YTNVYIKNMPSAWEDEARLRETFA 284
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 18/217 (8%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH-QGYGFVEFRSE 76
S ++ + +V NLD + + L++ F G +++ V D N H +GYGFV + +E
Sbjct: 165 SLRKSGNGNIFVKNLDKNIDNKALYDTFSLFGNILSCKVAVDE--NGHSKGYGFVHYENE 222
Query: 77 EDADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNL-DPDVDEKLLYDT 131
E A AI +N + + GK + V +A +D + N++I N+ DE L +T
Sbjct: 223 ESARSAIDKVNGMLIGGKTVYVGPFIRRAERDNLAETKYTNVYIKNMPSAWEDEARLRET 282
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN----RQITVS 187
F+ +G I T+ + +DP R F F ++ +++ AA+EA+NG+ + + ++ S
Sbjct: 283 FAKYGSI-TSLVVRKDP---KGRLFAFCNFADHDSAKAAVEALNGKRVTDAGAIKEGEDS 338
Query: 188 YAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFA 224
A +KD +G++ E+IL S+ R L A
Sbjct: 339 GAEEKDEEGQKR--EGEQILFVGPHQSKAHRSAMLRA 373
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 97 RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF 156
+ + +QD+ G NL+I N+D +D++ L F FG I T+ K+MRD + G SR F
Sbjct: 374 KFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSI-TSAKVMRD-ERGVSRCF 431
Query: 157 GFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
GF+ + S E + A+ M+ + + + + V A +++ + R
Sbjct: 432 GFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRLMR 473
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ Q +R Q Y+ N+D + +E L +LF G + + V +D + + +GFV F
Sbjct: 378 MNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAKVMRDE-RGVSRCFGFVCF 436
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
S E+A A+ +++ + GKP+ V A + ++ L
Sbjct: 437 MSPEEATKAVTEMHLKLVKGKPLYVGLAERREQRL 471
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L P VTE LL+E F AG ++++ V +D T GY +V F +A+ +
Sbjct: 12 TSLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERVLD 71
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L GKPIR+ + +D +KS +G N+FI NLD +D K +YDTFSAFG I++
Sbjct: 72 TMNFDLLKGKPIRIMWSQRDPSLRKS-GIG-NVFIKNLDKSIDNKAMYDTFSAFGNILS- 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D D G S+G+GF+ ++S EA++ AIE +NG L +++ V
Sbjct: 129 CKVAIDDD-GVSKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYV 172
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + +++ F G +++ V D + +GYGFV F S E A+ AI+ +
Sbjct: 102 VFIKNLDKSIDNKAMYDTFSAFGNILSCKVAIDD-DGVSKGYGFVHFESIEAANKAIEKV 160
Query: 87 NMIKLYGKPIRVNKAS-QDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L GK + V K + ++ ++G N+++ N ++ ++ LYD F +G I
Sbjct: 161 NGMLLNGKKVYVGKFIPRAEREKEIGEKSKKYTNVYVKNFGRNLTQEQLYDLFKNYGTI- 219
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
T+ +M +PD G S+GFGFI+++ E+++ A+ MN L + V A KK +
Sbjct: 220 TSCVVMANPD-GTSKGFGFIAFEEPESAEKAVTEMNNYELNGTNLYVGRAQKKSER 274
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 27/189 (14%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN---LHQGYGFVEFRSEEDADYAI 83
YV N +T+E L++LF G + + V + N +G+GF+ F E A+ A+
Sbjct: 195 VYVKNFGRNLTQEQLYDLFKNYGTITSCVV----MANPDGTSKGFGFIAFEEPESAEKAV 250
Query: 84 KVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEK 126
+N +L G + R K S+ K L GAN++I NLD D
Sbjct: 251 TEMNNYELNGTNLYVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYIKNLDDTFDND 310
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L FS FG I T+ K+M + G S+GFGF+ + + E + AI M+G+ + ++ I V
Sbjct: 311 RLRKEFSQFGAI-TSAKVM--TEGGRSKGFGFVCFSTPEEASKAITEMDGRMIGSKPIYV 367
Query: 187 SYAYKKDTK 195
+ A + + +
Sbjct: 368 ALAQRYEDR 376
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+L++G+L PDV E LLY+ FS G I++ ++ RD T S G+ ++++ ++ +
Sbjct: 12 TSLYVGDLHPDVTEALLYEKFSPAGQILS-LRVCRDSRTKQSLGYAYVNFSQTIEAERVL 70
Query: 172 EAMNGQYLCNRQITVSYA 189
+ MN L + I + ++
Sbjct: 71 DTMNFDLLKGKPIRIMWS 88
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 105/172 (61%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD VT+ L++LF Q G VV+V + +D + GYG+V F + DA A+
Sbjct: 24 TSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMD 83
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
VLN L KPIR+ + +D G AN+FI NLD +D K LYDTFS FG I++ K
Sbjct: 84 VLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILS-CK 142
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I D +G S+G+GF+ +++ E++ +AI+ +NG L ++ + V + +K +
Sbjct: 143 IAMDA-SGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDR 193
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 106/191 (55%), Gaps = 12/191 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ A ++ NLD + + L++ F G +++ + D + L +GYGFV+F +EE
Sbjct: 105 SVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMD-ASGLSKGYGFVQFENEE 163
Query: 78 DADYAIKVLNMIKLYGKPIRVN--KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTF 132
A AI LN + L KP+ V + QD+ + A N+++ NL V + L +TF
Sbjct: 164 SAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTF 223
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G I T+ +MRD D G S+ FGF+++++ +A+ A+EA+NG+ +++ V A KK
Sbjct: 224 GEYGTI-TSAVVMRDVD-GKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALKK 281
Query: 193 DTK----GERH 199
+ ERH
Sbjct: 282 YERELELKERH 292
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 20/190 (10%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YV NL VT++ L F + G + + V +D V + +GFV F + + A A++
Sbjct: 204 NVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRD-VDGKSKCFGFVNFENADAAAEAVEA 262
Query: 86 LNMIKLYGKPIRVNKASQD---------------KKSLD--VGANLFIGNLDPDVDEKLL 128
LN K K V KA + K+++D GANL++ NLD V ++ L
Sbjct: 263 LNGKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKL 322
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ FS FG VT+ KI+RDP G SRG GF+++ + E + A+ MNG+ + + + V+
Sbjct: 323 SELFSEFGT-VTSCKILRDP-QGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAP 380
Query: 189 AYKKDTKGER 198
A KK+ + R
Sbjct: 381 AQKKEERKAR 390
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
+ + ++ A Y+ NLD VT+E L ELF + G V + + +D + +G GFV F +
Sbjct: 297 KETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDP-QGISRGSGFVAFST 355
Query: 76 EEDADYAIKVLNMIKLYGKPIRV 98
E+A A+ +N + GKP+ V
Sbjct: 356 PEEATRALAEMNGKMVAGKPLYV 378
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 102/164 (62%), Gaps = 3/164 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A+
Sbjct: 48 SLYVGELDPSVTEAMLFEVFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALDQ 107
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + + R+ + +D G N+FI NLD +D K L+DTF+AFG +++ K+
Sbjct: 108 LNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS-CKV 166
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
D + GNS+G+GF+ Y++ EA++ AI+++NG L ++++ V +
Sbjct: 167 ATD-EHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFVGH 209
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q YV NLDP++ +E ELF + G + + + KD +G+GFV F S E A A
Sbjct: 226 QYTNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDE-EGKSRGFGFVNFESHEQAAAA 284
Query: 83 IKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDE 125
++ L+ ++ G+ + V +A Q+K S G NL+I NL+ D+D+
Sbjct: 285 VETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGVNLYIKNLEDDIDD 344
Query: 126 KLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQIT 185
+ L F FG I T+ K+MRD + S+GFGF+ + S + + A+ MN + + ++ +
Sbjct: 345 EKLRAEFEPFGTI-TSCKVMRD-EKNTSKGFGFVCFSSPDEATKAVSEMNNKMIGSKPLY 402
Query: 186 VSYAYKKDTK 195
VS A +++ +
Sbjct: 403 VSLAQRREVR 412
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 10/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD Q+ + L + F G V++ V D N +GYGFV + + E A+ AIK +N
Sbjct: 138 FIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGN-SKGYGFVHYETAEAAENAIKSVN 196
Query: 88 MIKLYGKPIRVN----KASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L K + V + + K ++ A N+++ NLDP++ ++ + F FG I T
Sbjct: 197 GMLLNDKKVFVGHHIPRKERQSKIDEMKAQYTNIYVKNLDPELGQEGFEELFGKFGNI-T 255
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ + +D + G SRGFGF++++S E + AA+E ++ + R++ V+ A KK +
Sbjct: 256 SAALSKDEE-GKSRGFGFVNFESHEQAAAAVETLHDTEINGRKLYVARAQKKSER 309
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG LDP V+E LL++LF G V ++ V +D +T GY +V F E AI+
Sbjct: 47 TSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQAIE 106
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GK R+ + +D G N+FI NL+ D+D K L+DTFS FG I+++ K
Sbjct: 107 KLNYTPIKGKLCRIMWSQRDPSLRKKGHGNIFIKNLNQDIDNKALFDTFSVFGNILSS-K 165
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
I D +TG S+GFGF+ ++ A++ AI+A+NG L ++I V+
Sbjct: 166 IATD-ETGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYVA 208
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N+D + T+E E F + G V +V + + L +G+GFV + DA A++ L
Sbjct: 230 VYVKNIDLETTDEEFKEFFGKIGTVTSVALERGPDGKL-KGFGFVNYEDHNDAVKAVEEL 288
Query: 87 NMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLY 129
N + + + V +A + +K + G NLF+ NLD +D++ L
Sbjct: 289 NGAEFKDQELFVGRAQKKYERIQSLKKQYESTRLEKMAKYQGVNLFVKNLDDSIDDEKLQ 348
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F+ FG I T+ K+MR + G S+GFGF+ + S E + AI N Q + + + V+ A
Sbjct: 349 EEFAPFGNI-TSVKVMR-TENGKSKGFGFVCFSSPEEATKAITEKNQQIVAGKPLYVAIA 406
Query: 190 YKKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 407 QRKDV---RRSQLAQQIQARNQMRYQQ 430
>gi|281204064|gb|EFA78260.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 617
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 117/217 (53%), Gaps = 26/217 (11%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAG--PVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Q + YVG+L P V E +L ELF + G V +++V +D +T GY +V F + DA+
Sbjct: 136 QYTSLYVGDLAPDVNEIMLSELFSKVGRSAVASIHVCRDSITFRSLGYAYVNFFNSIDAE 195
Query: 81 YAIKVLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 138
A+ LN ++ G+P R+ + +D K+ +VG N+F+ NLD VD +L+DTFS FG I
Sbjct: 196 RALDTLNYSQIMGRPCRIMWSLRDPTKRKSNVG-NIFVKNLDKQVDNAMLFDTFSKFGNI 254
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
++ KI + + G S+G+G++ +++ E+SD AI+ +NG LC + ITV E+
Sbjct: 255 LS-CKI--EYEKGVSKGYGYVHFETQESSDRAIQGVNGTMLCGKPITV----------EQ 301
Query: 199 HGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQ 235
+ ER N H LF L Q
Sbjct: 302 FVSKVERFKEKN--------EHKLFIKNIDELATVEQ 330
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD QV +L++ F + G +++ + ++ + +GYG+V F ++E +D AI+ +N
Sbjct: 231 FVKNLDKQVDNAMLFDTFSKFGNILSCKIEYEK--GVSKGYGYVHFETQESSDRAIQGVN 288
Query: 88 MIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
L GKPI V +K + K+ + LFI N+D + L S FG I
Sbjct: 289 GTMLCGKPITVEQFVSKVERFKEKNE--HKLFIKNIDELATVEQLQAELSRFGEI--ESC 344
Query: 144 IMRDPDTGNSRGFGFISYDSFE 165
I+R + G S+G GF+ + S E
Sbjct: 345 IIRLDNNGKSKGLGFVEFKSVE 366
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
LFI N+D +D++++ + F+ G I+ KI+++ G +RGFGF+SY + E ++ AIE
Sbjct: 461 LFIHNIDESIDKEVIREEFAKHGTIL-GIKIVQE--NGKNRGFGFLSYSTQEEANIAIEK 517
Query: 174 MNGQYLCNRQITVSYAYKKDTK 195
MNG L ++ ++VS++ +K K
Sbjct: 518 MNGFILGSKPLSVSFSNRKYKK 539
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ T ++ N+D + +E++ E F + G ++ + + ++ N +G+GF+ + ++E+A+ AI
Sbjct: 458 NLTLFIHNIDESIDKEVIREEFAKHGTILGIKIVQENGKN--RGFGFLSYSTQEEANIAI 515
Query: 84 KVLNMIKLYGKPIRVNKASQDKK 106
+ +N L KP+ V+ +++ K
Sbjct: 516 EKMNGFILGSKPLSVSFSNRKYK 538
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 111/171 (64%), Gaps = 7/171 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG--YGFVEFRSEEDADYAIKV 85
Y+GN+ P+VTE +L E+F AGPV V + DR T H G YGFVEF + + A+ A++
Sbjct: 15 YIGNISPRVTEYMLQEVFALAGPVQQVKIIPDR-TFQHGGLNYGFVEFYTMQGAEQALQT 73
Query: 86 LNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
L KL+ ++VN A Q+ K+ + ++F G+L P+V + +L TFSAFG + ++
Sbjct: 74 LAGRKLFDTEMKVNWAYQNQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSAFGSL-SDA 132
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
++M D +G SRG+GF+++ ++AAI AMNG++L +R I V++A +K+
Sbjct: 133 RVMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKN 183
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+ G+L P+VT+++L + F G + + V D + +GYGF+ FR DA+ AI +N
Sbjct: 106 FCGDLSPEVTDDILQKTFSAFGSLSDARVMWDMASGKSRGYGFLAFRDRADAEAAINAMN 165
Query: 88 MIKLYGKPIRVNKASQDKKS-------------------LDVGAN--------------- 113
L + IRVN A+Q + VG +
Sbjct: 166 GEWLGSRAIRVNWANQKNQGMMGDGGMGEGPPPPARSGGFQVGGSDYNMVVTQTPVSNTT 225
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
+++GNL P + L F +G IV +I D RGF F+ D+ E + AI
Sbjct: 226 VYVGNLVPYCTQADLIPLFQGYGYIV---EIRMQAD----RGFAFVKLDTHEHAAMAIAY 278
Query: 174 MNGQYLCNRQITVSYAYKKD 193
+ GQ R + S+ ++
Sbjct: 279 LTGQMCQGRSLKCSWGKDRE 298
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG---FGFISYDSFEASDA 169
+L+IGN+ P V E +L + F+ G V KI+ PD G +GF+ + + + ++
Sbjct: 13 HLYIGNISPRVTEYMLQEVFALAGP-VQQVKII--PDRTFQHGGLNYGFVEFYTMQGAEQ 69
Query: 170 AIEAMNGQYLCNRQITVSYAYKKDTKGE 197
A++ + G+ L + ++ V++AY+ T E
Sbjct: 70 ALQTLAGRKLFDTEMKVNWAYQNQTAKE 97
>gi|441675859|ref|XP_003280927.2| PREDICTED: uncharacterized protein LOC100588478 [Nomascus
leucogenys]
Length = 485
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E F AGP++++ + +D++T GY +V ++ DA A++
Sbjct: 287 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 346
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++
Sbjct: 347 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 406
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGER 198
D +G+GF+ + E+++ AI+ MNG +L R+I V + K+ + ER
Sbjct: 407 AC---DEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAER 459
>gi|318087158|gb|ADV40171.1| putative polyA binding protein cytoplasmic 1 isoform 1 [Latrodectus
hesperus]
Length = 217
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 115/186 (61%), Gaps = 7/186 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGPV+++ V +D + GY +V F+ DA+ A+
Sbjct: 13 ASLYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALD 72
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 73 TMNFDMVKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNLDKSIDNKAMYDTFSAFGNILS- 129
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ D ++ NS+G+GF+ +++ EA++ AI+ +NG L R++ V + + ++ G
Sbjct: 130 CKVATDEES-NSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQLGQ 188
Query: 202 PAERIL 207
A R +
Sbjct: 189 KARRFM 194
>gi|449016981|dbj|BAM80383.1| polyadenylate-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 999
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVG+L P V E+ L+ELF GPVV+V V +D VT GY +V F++ EDA+ AI
Sbjct: 175 NVSLYVGDLQPDVVEQNLFELFSSVGPVVSVRVCRDVVTRRSLGYAYVNFQNPEDAERAI 234
Query: 84 KVLNMIK---LYGKPIRVN-KASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
VL + KPIR+ K S + + N+FI NLD +D K LYDTFS FG ++
Sbjct: 235 DVLQFYEGPLTKNKPIRIMWKRSDPSQRRNPEGNIFIKNLDKSIDNKALYDTFSTFGKVL 294
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ K+ D D GNS G+ F+ Y + I MNG L +++ V
Sbjct: 295 S-CKLATD-DKGNSLGYAFVHYQDANVAKYVISKMNGMLLNGQKVYV 339
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 23/149 (15%)
Query: 66 QGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-------------------KK 106
+G+ FV F + E A A++ LN ++L GK + V +A + +K
Sbjct: 469 RGFAFVNFETPEQAAAAVEALNGMELNGKTLYVGRAQKKAEREAMLRAQMEQLRNDRMQK 528
Query: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
DV NLF+ NL DVDE L + FS FG I T+ +IMRD + G S+GFGF+++ +
Sbjct: 529 LQDV--NLFVKNLSDDVDENRLREEFSRFGTI-TSLRIMRD-EKGVSKGFGFVAFSHPDE 584
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ A+ MN + + + I V+ A +KD +
Sbjct: 585 AIKAVTEMNQRIVGQKPIYVALAQRKDQR 613
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S RN + ++ NLD + + L++ F G V++ + D N GY FV ++
Sbjct: 260 SQRRNPEGNIFIKNLDKSIDNKALYDTFSTFGKVLSCKLATDDKGN-SLGYAFVHYQDAN 318
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG------ANLFIGNLDPDV-DEKLLYD 130
A Y I +N + L G+ + V + ++ G N+++ NLD + + +
Sbjct: 319 VAKYVISKMNGMLLNGQKVYVGEFRPRREREATGELSTKFTNVYVKNLDESLCTTEEVTK 378
Query: 131 TFSAFGVIVT 140
F+ +G I +
Sbjct: 379 LFAPYGNITS 388
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 42/206 (20%)
Query: 28 YVGNLDPQV-TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR--SEEDADYAIK 84
YV NLD + T E + +LF G + ++++P + V Q + E R SEE + A
Sbjct: 362 YVKNLDESLCTTEEVTKLFAPYGNITSIFIPTETVQE-QQPHHEDEHRAPSEEASSEAG- 419
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSA-------FGV 137
R +SQ+ KS GA+ N PD++ D A V
Sbjct: 420 ------------RQGGSSQEVKS--AGADQ--SNAAPDLETSERNDGAKAPENRAHAQSV 463
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+ P RGF F+++++ E + AA+EA+NG L + + V A K K E
Sbjct: 464 VRVRP-----------RGFAFVNFETPEQAAAAVEALNGMELNGKTLYVGRAQK---KAE 509
Query: 198 RHGTPAERILAANNPSSQKSRPHTLF 223
R ++ N QK + LF
Sbjct: 510 REAMLRAQMEQLRNDRMQKLQDVNLF 535
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 8/199 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ PQVT+ LL ELF AG + + + ++ YGFV++ A +AI
Sbjct: 47 SVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVT 102
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN ++G+PI+VN A + D N+F+G+L P+V + LY FS + ++ +
Sbjct: 103 LNGRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPS-CSDAR 161
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK-KDTKGERHGTP 202
+M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K E+ +
Sbjct: 162 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQTSD 221
Query: 203 AERILAANNPSSQKSRPHT 221
+ ++ N SS+ + T
Sbjct: 222 SRSVVELTNGSSEDGQETT 240
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 52/228 (22%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G N+ GQ +++ + +D + +VG+L P+VT+ L+ F + V
Sbjct: 105 GRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMW 164
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN------KASQDKKSLDVGA 112
D+ T +G+GFV FR+++DA AI L L + IR N AS +K++ D +
Sbjct: 165 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQTSDSRS 224
Query: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++GNL P+V L+ F + + + +
Sbjct: 225 VVELTNGSSEDGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVR 284
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
+ RD +GFGF+ Y + + AI+ N + L + I S+ K
Sbjct: 285 VQRD------KGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSK 326
>gi|395754119|ref|XP_002831853.2| PREDICTED: uncharacterized protein LOC100437512 [Pongo abelii]
Length = 528
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E F AGP++++ + +D++T GY +V ++ DA A++
Sbjct: 330 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 389
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++
Sbjct: 390 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 449
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGER 198
D +G+GF+ + E+++ AI+ MNG +L R+I V + K+ + ER
Sbjct: 450 AC---DEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAER 502
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 104/173 (60%), Gaps = 4/173 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVG L+P V E +L+E+F G V ++ V +D VT GY +V F + ED++ A+
Sbjct: 79 NTSLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERAL 138
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I++
Sbjct: 139 EQLNYTPIRGRPCRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKILS-C 197
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+ + S G+GF+ Y+S +A++AAI+ +NG L ++++ V + K +
Sbjct: 198 KVASNEH--GSLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDR 248
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 33/224 (14%)
Query: 14 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTN 63
+G H +++++ A YV NLDP VT+E +LF + G + + + D+
Sbjct: 239 VGHHISKKDRQAKIEEARAHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQ-EG 297
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSLDV---------- 110
+G+GFV F E A A++ LN + +G+ + R K S+ ++ L
Sbjct: 298 KSRGFGFVNFSEHEQAAKAVEELNDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKL 357
Query: 111 ----GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
G NL+I NL D D++ L + F+ FG T+ K+MR P TG SRGFGF+ Y + E
Sbjct: 358 SKYQGVNLYIKNLPEDFDDERLQEEFAPFGT-TTSAKVMRTP-TGASRGFGFVCYSAPEE 415
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAAN 210
++ A+ MNG+ + NR + V+ A +KD RH A +++ N
Sbjct: 416 ANKAVAEMNGKMIENRPLYVALAQRKDV---RHQQLAAQMMQHN 456
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YVG LDP+VTE++L ++F G VV+V +P T YGFVEF A+ A++ L
Sbjct: 94 YVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAMQTL 153
Query: 87 NMIKLYGKPIRVNKASQD----KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
N +++ IRVN A Q K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 154 NGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGS-VSEA 212
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF+++ +D A+ +M+G++L +R I ++A +K
Sbjct: 213 RVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQK 262
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 46/204 (22%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L +V +E+L + F G V V D T +GYGFV FR +AD A+ ++
Sbjct: 186 FVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMD 245
Query: 88 MIKLYGKPIRVNKASQDKK-------------------------------SLDVGA---- 112
L + IR N A+Q + S D+ A
Sbjct: 246 GEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVAQQTP 305
Query: 113 ----NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
++GNL P + L F FG ++ ++ D RGF F+ DS E +
Sbjct: 306 QWQTTCYVGNLTPYTTQNDLVPLFQNFGYVL-ETRLQAD------RGFAFVKMDSHENAA 358
Query: 169 AAIEAMNGQYLCNRQITVSYAYKK 192
+AI +NG + R + S+ +
Sbjct: 359 SAICQLNGYNVNGRPLKCSWGKDR 382
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPD-TGNSRGFGFISYDSFEASDAAIE 172
L++G LDP V E +L F G +V+ KI+ D + T +GF+ +D A++ A++
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVS-VKIIPDKNFTTKGHNYGFVEFDDPGAAERAMQ 151
Query: 173 AMNGQYLCNRQITVSYAY------KKDTKGERH 199
+NG+ + +I V++AY K+DT H
Sbjct: 152 TLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFH 184
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGNL P T+ L LF G V+ + DR G+ FV+ S E+A AI
Sbjct: 310 TCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADR------GFAFVKMDSHENAASAICQ 363
Query: 86 LNMIKLYGKPIRV 98
LN + G+P++
Sbjct: 364 LNGYNVNGRPLKC 376
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L V E L LF Q PV V V +D ++ + GYG+V F S ++A A++
Sbjct: 2 ASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALE 61
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L GK IRV +++D G ANLF+ NL+P++D K LY+ FS+FG I++ K
Sbjct: 62 ALNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILS-CK 120
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D G S+G+GF+ Y++ E+++AAI +NG NR++ V
Sbjct: 121 VATDS-AGQSKGYGFVQYETEESAEAAINGLNGMLANNRKMFV 162
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ A +V NL+P + + L+E+F G +++ V D +GYGFV++ +EE
Sbjct: 83 SLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQ-SKGYGFVQYETEE 141
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
A+ AI LN + + + V + + N++I NL + E L F+ FG
Sbjct: 142 SAEAAINGLNGMLANNRKMFVGLHMRRRDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGE 201
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I T+ +MRD D G S+ FGF+++ E + A+E NG+ + ++ + V A KK+ +
Sbjct: 202 I-TSAVVMRDAD-GASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEER 257
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 131/316 (41%), Gaps = 72/316 (22%)
Query: 13 LLGQHSAERNQDA---TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYG 69
+G H R+++ Y+ NL + +E+ L + F G + + V +D + +G
Sbjct: 161 FVGLHMRRRDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRD-ADGASKCFG 219
Query: 70 FVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GA 112
FV F+ E A A++ N + K + R K + K L G
Sbjct: 220 FVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGI 279
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
NL++ N+D ++++ L F FG V + K+M D G S+G GF+S+ + EA AI
Sbjct: 280 NLYLKNIDDGINDEGLKKLFEEFGQ-VASCKVMVDA-RGRSKGSGFVSFATAEAGQRAIN 337
Query: 173 AMNGQYLCNRQITVSYAY-KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
MNG+ + + + V A K++ K A+R LA +SQ + P ++
Sbjct: 338 RMNGRIVGKKPLYVGLAQPKEERKAMLMAHFAQRNLAM--AASQYAGPQQVY-------- 387
Query: 232 NAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQHI 291
G P P GPI+ PPQ A F G PQH
Sbjct: 388 --------FGHPSSP---------GPIA-------PPQGAVF------------GFPQHF 411
Query: 292 --GQGVPQPVMPPPMQ 305
G G PVM PP++
Sbjct: 412 VPGMGPISPVMMPPLR 427
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
A+L++G+L VDE L+ FS + T ++ RD +G S G+G++++ S + + A+
Sbjct: 2 ASLYVGDLAETVDEPQLHALFSQVAPVAT-VRVCRDILSGVSLGYGYVNFYSRQEATRAL 60
Query: 172 EAMNGQYLCNRQITVSYA 189
EA+N L + I V ++
Sbjct: 61 EALNFTPLIGKYIRVMFS 78
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 118/224 (52%), Gaps = 12/224 (5%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVGN+ PQVTE LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 50 SVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSS-----YGFVDYFDRRSAALAIV 104
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG--ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++
Sbjct: 105 TLNGRHLFGQPIKVNWAYASAQREDTSNHYNIFVGDLSPEVTDATLFACFSVY-TSCSDA 163
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
++M D TG SRGFGF+S+ + + + +AI +NG++L +RQI ++A K +
Sbjct: 164 RVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVGEQNSD 223
Query: 203 AERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP 246
A+ ++ + +S + + P +N PQ G + P
Sbjct: 224 AKSVVELTSGTSDDGQEKVVNEDAP---ENNPQYTTVYVGNLAP 264
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 52/228 (22%)
Query: 10 GANLLGQ--------HSAERNQDATAY---VGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G +L GQ SA+R + Y VG+L P+VT+ L+ F + V
Sbjct: 108 GRHLFGQPIKVNWAYASAQREDTSNHYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMW 167
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ----------DKKSL 108
D+ T +G+GFV FR++++A AI LN L + IR N A++ D KS+
Sbjct: 168 DQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVGEQNSDAKSV 227
Query: 109 --------DVG----------------ANLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
D G +++GNL P+V L+ F A G ++ + +
Sbjct: 228 VELTSGTSDDGQEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVR 287
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
I RD +GFGF+ Y S + AI+ N + L + + S+ K
Sbjct: 288 IQRD------KGFGFVRYSSHAEAARAIQLGNARLLFGKPVKCSWGSK 329
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE+LL++ F GPV+++ + +D VT GY +V F DA A+
Sbjct: 109 ASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALD 168
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKPIR+ + +D G N+FI NLD +D K LY+ FSAFG I+++ K
Sbjct: 169 TMNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSS-K 227
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
+M D D G SRG+ F+ + + A+D AIE MNG L + ++ V + +KD + E
Sbjct: 228 VMSD-DQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAE 280
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L+E F G +++ V D +GY FV F+++ AD AI+ +
Sbjct: 199 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSD--DQGSRGYAFVHFQNQNAADRAIEEM 256
Query: 87 N--MIK----LYGK-PIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N ++K G+ R ++ ++ + ++ N+++ N D+D++ L + FS +G +
Sbjct: 257 NGALLKDCRLFVGRFKNRKDREAELQNKVNEFTNVYVKNFGDDMDDERLKEVFSKYGKTL 316
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ K+M D G S+GFGF+S+DS EA+ A+E MNG+ + + + V A KK +
Sbjct: 317 S-VKVMTDS-GGKSKGFGFVSFDSHEAAKKAVEEMNGKDVNGQLLFVGRAQKKSER 370
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N+ YV N + +E L E+F + G ++V V D +G+GFV F S E A
Sbjct: 286 NEFTNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDS-GGKSKGFGFVSFDSHEAAKK 344
Query: 82 AIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVD 124
A++ +N + G+ + V +A Q++ G L+I NLD +D
Sbjct: 345 AVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNLDDTID 404
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
++ L+ FS+FG I + KIMR+ G S+GFG I + S E + A+ MNG+ L ++ +
Sbjct: 405 DEKLWREFSSFGSI-SRVKIMREE--GRSKGFGLICFSSPEEATKAMAEMNGRILGSKPL 461
Query: 185 TVSYA 189
++ A
Sbjct: 462 YIALA 466
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q R Q Y+ NLD + +E LW F G + V + ++ +G+G + F
Sbjct: 381 LKQERFRRCQGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMRE--EGRSKGFGLICF 438
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRV 98
S E+A A+ +N L KP+ +
Sbjct: 439 SSPEEATKAMAEMNGRILGSKPLYI 463
>gi|296470851|tpg|DAA12966.1| TPA: PABPC1L2B protein-like [Bos taurus]
Length = 489
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 105/176 (59%), Gaps = 5/176 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E F AGP++++ + +D++T GY +V ++ DA A++
Sbjct: 291 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 350
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++
Sbjct: 351 TLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKV 410
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGER 198
D +G+GF+ + E+++ AI+AMNG +L R+I V + K+ + ER
Sbjct: 411 AC---DEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAER 463
>gi|254576977|ref|XP_002494475.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
gi|238937364|emb|CAR25542.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
Length = 410
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 132/259 (50%), Gaps = 24/259 (9%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
D YVGNLD +TEE+L + F G + NV V D+ N Y FVE+ DA+ A+
Sbjct: 55 DRVLYVGNLDKSITEEVLRQYFQVGGQISNVKVMIDK-NNARANYAFVEYFKSHDANIAL 113
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSL--DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN ++ +R+N A Q +++L + NLF+G+L DVD++ L + F +F +
Sbjct: 114 QTLNGKQIENNVVRINWAFQSQQALPDENTYNLFVGDLSVDVDDETLCNAFRSFPSFIQG 173
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDT--KGERH 199
+M D TG SRG+GF+S+ E + A+++M Q L R + +++A K++ G R
Sbjct: 174 -HVMWDMQTGGSRGYGFVSFGDQEQAQLAMDSMQSQELNGRPLRINWASKRENHHNGNRR 232
Query: 200 GTPAERILAANNPSSQKSRPHTL--FASG----PPSLQNAPQANGTVGGPVPPRPYANGA 253
G LA N + P+ F G PP+ P +GG +PP GA
Sbjct: 233 GG-----LAGNRNGGMRLFPNNNNGFGRGMPMPPPNSMGIP-----LGGTLPPNAQPMGA 282
Query: 254 -ASGPISAVRPPPPPPQAA 271
SGP V PPP PQA
Sbjct: 283 PPSGPAPTV-PPPVNPQAV 300
>gi|444315954|ref|XP_004178634.1| hypothetical protein TBLA_0B02730 [Tetrapisispora blattae CBS 6284]
gi|387511674|emb|CCH59115.1| hypothetical protein TBLA_0B02730 [Tetrapisispora blattae CBS 6284]
Length = 255
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 125/226 (55%), Gaps = 43/226 (19%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
+ +T YVGNLDP++T+ L+ELF+Q G + + P+D+++ +QG+ FVEF+S +D++Y
Sbjct: 22 ESSTIYVGNLDPRITKLDLYELFIQFGKIYKINYPRDKISENYQGFAFVEFQSAKDSNYV 81
Query: 83 IKVLNM-----------IKLYGKPIRV---NKASQDKKS-------------LDVG---- 111
+ + I LYGKPI++ N +DKK+ +DV
Sbjct: 82 LSLFQNNNQNNYNNQLSISLYGKPIKIRPQNNQLKDKKNNQQFILKKNNNTQVDVNLLPV 141
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFG-FISYDSFEASDAA 170
A LF+ LD VD L F+ FG +V +P+++ P N++ G +I + S+ SD A
Sbjct: 142 AKLFLKGLDDTVDLNQLKIIFNKFGELVKDPELV--PLKSNAQMVGIYIYFRSYTDSDNA 199
Query: 171 IEAMNGQYLCNRQITVSYAYKK---DT------KGERHGTPAERIL 207
I+++N +++ N+QI + YA+K DT K R+G +R+L
Sbjct: 200 IKSLNKKFIFNKQIQLEYAFKNSVSDTISTASKKQTRYGDEIDRVL 245
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG+L+ V++ L+ELF QAG VV+V V +D + GY +V + + DA A++V
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN L KPIRV +++D S G AN+FI NLD +D K L++TFS+FG I++ K+
Sbjct: 95 LNFAALNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILS-CKV 153
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
D + G S+GFGF+ YD EA+ AI+++NG + ++
Sbjct: 154 AVD-EAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDK 190
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S+ R+ A ++ NLD + + L E F G +++ V D +G+GFV++ EE
Sbjct: 115 SSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSCKVAVDEAGQ-SKGFGFVQYDKEE 173
Query: 78 DADYAIKVLNMIKLYGKPIRV--------NKASQDKKSLDVGANLFIGNLDPDVDEKLLY 129
A AIK LN + + KP+ V S DK + N+F+ NL ++ L
Sbjct: 174 AAQNAIKSLNGMLINDKPVFVGPFVRKQERDHSFDKTKFN---NVFVKNLSESTTKEDLL 230
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F +G I T+ +M D G SR FGFI++++ +A+ A++ +NG+ + +++ V A
Sbjct: 231 KIFGEYGDI-TSAVVMIGMD-GKSRCFGFINFENPDAASHAVQELNGKKINDKEWYVGRA 288
Query: 190 YKKDTK 195
KK +
Sbjct: 289 QKKSER 294
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 30/201 (14%)
Query: 17 HSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVP-----KDRVTNLHQGYGFV 71
HS ++ + +V NL T+E L ++F + G + + V K R +GF+
Sbjct: 205 HSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDGKSRC------FGFI 258
Query: 72 EFRSEEDADYAIKVLNMIKLYGKPIRVNKA-SQDKKSLDV----------------GANL 114
F + + A +A++ LN K+ K V +A + ++ +++ G NL
Sbjct: 259 NFENPDAASHAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNL 318
Query: 115 FIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAM 174
++ NLD + + L + FS FG I T+ K+MRD + G S+G GF+++ + E + A+ M
Sbjct: 319 YLKNLDDSIGDDQLCELFSNFGKI-TSYKVMRDQN-GLSKGSGFVAFSTREEASQALTEM 376
Query: 175 NGQYLCNRQITVSYAYKKDTK 195
NG+ + + + V++A +K+ +
Sbjct: 377 NGKMISGKPLYVAFAQRKEDR 397
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 113 NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+L++G+L+ V + LY+ FS G +V+ ++ RD + S G+ +++Y + + A+E
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVS-VRVCRDVTSRRSLGYAYVNYSNPLDAARALE 93
Query: 173 AMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFAS 225
+N L N+ I V Y+ +D R G+ I + K+ H F+S
Sbjct: 94 VLNFAALNNKPIRVMYS-NRDPSSRRSGSANIFIKNLDKTIDNKT-LHETFSS 144
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 4/172 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LD V E L+ +F Q G V +V V +D VT GYG+V + S DA A++
Sbjct: 37 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 96
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GK IR+ + +D + G N+FI NLD +D K L+DTF AFG I++
Sbjct: 97 ALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKI 156
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+D G S+G+GF+ +++ EA++ AIE +NG L +++ V+ K+ +
Sbjct: 157 AHQD---GRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDR 205
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 98/170 (57%), Gaps = 9/170 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L + F+ GP+++ + +GYGFV F ++E A+ AI+ +N
Sbjct: 128 FIKNLDESIDNKALHDTFIAFGPILSCKIAHQ--DGRSKGYGFVHFETDEAANLAIEKVN 185
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-----ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
++L GK + V K + L N+F+ NLDP++ E+ + + FS FGVI TN
Sbjct: 186 GMQLVGKKVFVAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEINEHFSTFGVI-TNV 244
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
IM+D + S+GFGF+++D EA+ AA+E MN L +R I V A KK
Sbjct: 245 VIMKD-ENDKSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKK 293
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 22/187 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V NLDP++ EE + E F G + NV + KD + +G+GFV F E A A++ +
Sbjct: 217 VFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDE-NDKSKGFGFVNFDDPEAARAAVETM 275
Query: 87 NMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLY 129
N +L + I V +A + + + GANL++ NLD +D++ L
Sbjct: 276 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 335
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDS-FEASDAAIEAMNGQYLCNRQITVSY 188
FS +G I T+ K+MRD + G S+GFGF+ + S EAS AA E NG + + I V+
Sbjct: 336 QEFSRYGNI-TSAKVMRD-EKGISKGFGFVCFTSPEEASRAATET-NGLMINGKPIYVAM 392
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 393 AQRKEIR 399
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G +L++G+LD V E L+ FS G +VT+ ++ RD T S G+G+++Y S + A
Sbjct: 36 GVSLYVGDLDETVAETQLFTIFSQMG-LVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRA 94
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGP 227
+EA+N + + I + +++ +D + G I + K+ T A GP
Sbjct: 95 MEALNYTPINGKTIRIMWSH-RDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGP 150
>gi|294939182|ref|XP_002782349.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
gi|239893941|gb|EER14144.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
Length = 266
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 5/181 (2%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ Y G+L P V E +L+E+F GPV ++ V +D VT GY ++ F + DA+ A
Sbjct: 46 QFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 105
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN + G+P R+ + +D GA N+++ NLD ++D K LYDTFS FG I++
Sbjct: 106 LDTLNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILS- 164
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ PD G SRGFGF+ ++S E+++AAI +NG + + TV A K T G+
Sbjct: 165 CKVALTPD-GKSRGFGFVHFESDESAEAAIAKLNGMQIGEK--TVYVAQFKKTADRSDGS 221
Query: 202 P 202
P
Sbjct: 222 P 222
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVP-----KDRVTNLHQGYGFVEFRS 75
R+ YV NLD + + L++ F G +++ V K R G+GFV F S
Sbjct: 132 RSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSR------GFGFVHFES 185
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-------ANLFIGNLDPDVDEKLL 128
+E A+ AI LN +++ K + V +Q KK+ D N++I ++ P E+ +
Sbjct: 186 DESAEAAIAKLNGMQIGEKTVYV---AQFKKTADRSDGSPKNFTNVYIKHIPPSWTEEKI 242
Query: 129 YDTFSAFGVIVT 140
+ F AFG I +
Sbjct: 243 REEFGAFGEITS 254
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F G ++++ V + +T GY +V F++ DA+ A+
Sbjct: 2 ASLYVGDLHSDVTEAMLFEKFSTVGAILSIRVCRHVITRSSLGYAYVNFQNIADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N L G P+R+ + +D +KS VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDILKGHPMRIMWSQRDPSLRKS-GVG-NVFIKNLDRSIDNKAMYDTFSAFGNILS- 118
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ +D +TGNS+G+GF+ +++ +++ +IE +NG L +++ V
Sbjct: 119 CKVAQD-ETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFV 162
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 97/170 (57%), Gaps = 17/170 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + +++ F G +++ V +D N +GYGFV F +++ A +I+ +
Sbjct: 92 VFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDETGN-SKGYGFVHFETKQSATQSIEKV 150
Query: 87 NMIKLYGKPIRVNK-ASQDKKSLDVG------ANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N + L GK + V + ++ + ++G N++I N+D +V+EK L++ F +G I
Sbjct: 151 NGMLLNGKKVFVGRFVGRNDREKELGQRAKLYTNVYIKNIDENVNEKELFEMFKKYGTI- 209
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ-------YLCNR 182
T+ K+M D G+SRGFGF++++ + ++ A+ ++G+ Y NR
Sbjct: 210 TSCKVMF-KDDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNR 258
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 25/199 (12%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVP-KDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Y+ N+D V E+ L+E+F + G + + V KD ++ +G+GFV F ++A+ A+
Sbjct: 185 VYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSS--RGFGFVAFEDPKEAEKAVTE 242
Query: 86 LNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
L+ K GK VN+A + K+ + G NL++ NLD +D++
Sbjct: 243 LHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDER 302
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L FSAFG I + +M D G S+GFGF+ + S E + A+ MNG+ + + + V+
Sbjct: 303 LRREFSAFGTIKSAKVMM---DDGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVT 359
Query: 188 YA-YKKDTKGERHGTPAER 205
A KKD K ++R
Sbjct: 360 LAQRKKDRKAHLDSQYSQR 378
>gi|357117760|ref|XP_003560630.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Brachypodium distachyon]
Length = 654
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVGNL+ VTE+ L +LF QA PVV+V + D+VT GY +V F S EDA A++
Sbjct: 31 VSVYVGNLEASVTEQQLLDLFSQAVPVVSVRICDDKVTGRSLGYAYVNFHSHEDAKVALE 90
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
N + GK IRV +++D G ANLFI NL+P++ K L+ FS FG+I++ K
Sbjct: 91 YFNFTVVNGKSIRVMFSNRDPTLRRSGAANLFIKNLEPNIVAKSLHQMFSRFGIILS-CK 149
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN---RQITVSYAYKKDTK 195
+ D + G S+G+GF+ + S E++ A+ A+NG+ L N +Q+ V +++ +
Sbjct: 150 VATDLN-GKSKGYGFVQFVSEESAKDAMNALNGK-LANGNGKQLYVDLFIRREER 202
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+ R+ A ++ NL+P + + L ++F + G +++ V D + +GYGFV+F SEE
Sbjct: 112 TLRRSGAANLFIKNLEPNIVAKSLHQMFSRFGIILSCKVATD-LNGKSKGYGFVQFVSEE 170
Query: 78 DADYAIKVLN--MIKLYGKPIRVNKASQDKKSLDVG-----ANLFIGNLDPDVDEKLLYD 130
A A+ LN + GK + V+ + ++ +G N++ NL + + L
Sbjct: 171 SAKDAMNALNGKLANGNGKQLYVDLFIRREERQHIGGASKFTNVYTKNLPKEFTDDDLCR 230
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ +M+D D G S+ FGF++Y+ E ++ A+E +NG+ + + + V A
Sbjct: 231 VFAPFGTI-TSAVVMKDGD-GESKCFGFVNYEKTEYAEEAVEKLNGKIISDVALYVGRAK 288
Query: 191 KKDTKGERHGTPAERILAANNPSSQKSRPHTLF 223
+K ER E+ N +KS+ L+
Sbjct: 289 RKQ---ERQAELKEKFDKERNDKIRKSKGCNLY 318
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 136/326 (41%), Gaps = 63/326 (19%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
QH ++ Y NL + T++ L +F G + + V KD + +GFV +
Sbjct: 203 QHIGGASKFTNVYTKNLPKEFTDDDLCRVFAPFGTITSAVVMKDG-DGESKCFGFVNYEK 261
Query: 76 EEDADYAI-----KVLNMIKLY-GKPIR-----------VNKASQDKKSLDVGANLFIGN 118
E A+ A+ K+++ + LY G+ R +K DK G NL++ N
Sbjct: 262 TEYAEEAVEKLNGKIISDVALYVGRAKRKQERQAELKEKFDKERNDKIRKSKGCNLYLKN 321
Query: 119 LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQY 178
LD +D++ L + F F I T K+M D + G S+GFGF+ + + EA++ A+ N +
Sbjct: 322 LDCSIDDEYLRNLFGRFDDIGT-CKVMVDSE-GRSKGFGFVLFTTIEAANKAVSXRNERK 379
Query: 179 LCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANG 238
L ++ Y K ER ILAA Q +R H + A P QN
Sbjct: 380 LVGTKLL--YVCVAQRKEERSA-----ILAA-----QFARRHMVGARTPAMPQN------ 421
Query: 239 TVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQ----HIGQG 294
+ PRP+ G P VR PQA F +Q PQ + G
Sbjct: 422 -----IAPRPFYFGYGV-PGVLVR-----PQATGF---------GYQQYPQPVIPGLNPG 461
Query: 295 VPQPVMPPPMQFRPPPNMPPPPPPQL 320
P +MP M RP + P QL
Sbjct: 462 APSLMMPYHM-LRPIHHQPQQQMAQL 486
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 107 SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEA 166
S ++++GNL+ V E+ L D FS V V + +I D TG S G+ ++++ S E
Sbjct: 26 SFGSSVSVYVGNLEASVTEQQLLDLFSQ-AVPVVSVRICDDKVTGRSLGYAYVNFHSHED 84
Query: 167 SDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFA 224
+ A+E N + + I V ++ + T R A + P+ H +F+
Sbjct: 85 AKVALEYFNFTVVNGKSIRVMFSNRDPTL--RRSGAANLFIKNLEPNIVAKSLHQMFS 140
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L P+V+E+ L+E+F Q G V N+ V +D T Y +V + + DA+ A+
Sbjct: 10 SSLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERALD 69
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN + GKP R+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 70 TLNNTPIRGKPCRIMWSQRDPSLRKS-GVG-NVFIKNLDKGIDHKALYDTFSAFGNILS- 126
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K++ D D +S+GFGF+ Y+S +++D AI +NG + +++ V
Sbjct: 127 CKVVTD-DNNSSKGFGFVHYESQDSADKAIAKVNGMMINGQKVFV 170
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+ NL VT + L EL G + NV + D T +G+ F F S + A +++
Sbjct: 190 VFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANFESADAAKNVVEIE 249
Query: 87 NMIKLYGKPI-------RVNKASQDKKSLDV---GANLFIGNLDPDVDEKLLYDTFSAFG 136
N +GKP+ ++ + ++ K + + G NL+I N+D +D L + FS FG
Sbjct: 250 NGKVFHGKPLYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFG 309
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
I T+ +M+D S+GFGF+ Y S + + A+ MNG+ + + + V+ A +KD +
Sbjct: 310 TI-TSAVVMKDDKATTSKGFGFVCYTSPDEATRAVTEMNGRMIGTKPLYVALAQRKDIR 367
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
+ ++L++G+L P+V E+ L++ F+ G +V+N ++ RD +T S + +++Y + A+DA
Sbjct: 8 ISSSLYVGDLLPEVSEQTLFEVFNQVG-LVSNIRVCRDTNTRRSLSYAYVNY--YNAADA 64
Query: 170 --AIEAMN 175
A++ +N
Sbjct: 65 ERALDTLN 72
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 16 QHSAE-RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFR 74
+H+ E + Q Y+ N+D + + L E+F Q G + + V KD +G+GFV +
Sbjct: 275 KHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFGTITSAVVMKDDKATTSKGFGFVCYT 334
Query: 75 SEEDADYAIKVLNMIKLYGKPIRV 98
S ++A A+ +N + KP+ V
Sbjct: 335 SPDEATRAVTEMNGRMIGTKPLYV 358
>gi|198422488|ref|XP_002121866.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4
(inducible form) [Ciona intestinalis]
Length = 270
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 136/266 (51%), Gaps = 18/266 (6%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F QAGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 12 ASLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 71
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ + +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 72 TMNYDPIKGRPIRIMWSQRDPSLRKS-GVG-NIFIKNLDKSIDNKALYDTFSAFGNILS- 128
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ + S+G+GF+ +++ EA AIE +NG L ++++ V K T+ ER
Sbjct: 129 CKV--SCNENGSKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVG---KFLTRSERIKK 183
Query: 202 PAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPISAV 261
ER+ N + +LQ + G V R +G + G
Sbjct: 184 MGERVRQFTNVYIKNFGDKY----DEKTLQVMFEKYGVVKSVAVMRD-RDGNSRGFGFVA 238
Query: 262 RPPPPPPQAA--AFPPMQVAGQAAWQ 285
QAA A ++ G + W+
Sbjct: 239 YDSHEEAQAAVEAMNGQEIEGASGWR 264
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q Y+ N + E+ L +F + G V +V V +DR N +G+GFV + S E+A A
Sbjct: 190 QFTNVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDGN-SRGFGFVAYDSHEEAQAA 248
Query: 83 IKVLN 87
++ +N
Sbjct: 249 VEAMN 253
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 103/164 (62%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L + E L+E F AGPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + KPIR+ + +D + VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDLIRNKPIRIMWSQRDPSLRRSGVG-NVFIKNLDRQIDNKAIYDTFSAFGNILS-C 119
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D + GNS+G+GF+ +++ EA++ +IE +NG L +++ V
Sbjct: 120 KVALD-EKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYV 162
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD Q+ + +++ F G +++ V D N +GYGFV F +EE
Sbjct: 83 SLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALDEKGN-SKGYGFVHFETEE 141
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYD 130
A+ +I+ +N + L GK + V K + +K L A LF + N + D++ L D
Sbjct: 142 AANTSIEKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEEFDDEKLKD 201
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN-RQITVSYA 189
F +G I T+ K+M D G S+GFGF+++++ EA++AA++A+NG+ + + + V+ A
Sbjct: 202 FFEPYGKI-TSYKVMSKED-GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARA 259
Query: 190 YKK 192
KK
Sbjct: 260 QKK 262
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N + +E L + F G + + Y + +G+GFV F + E A+ A++ LN
Sbjct: 186 YVKNFTEEFDDEKLKDFFEPYGKITS-YKVMSKEDGKSKGFGFVAFETTEAAEAAVQALN 244
Query: 88 MIKL-YGKPIRVNKASQD-------KKSLD----------VGANLFIGNLDPDVDEKLLY 129
+ GK + V +A + K+ + G NL++ NLD +D++ L
Sbjct: 245 GKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERLR 304
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M D + G S+GFGF+ + S + A+ +NG+ + ++ + V+ A
Sbjct: 305 KEFSLYGTI-TSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 190 YKKDTK 195
+K+ +
Sbjct: 363 QRKEER 368
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A + + A+ YVG+L VTE+LL++ F GPV+++ + +D VT GY +V F D
Sbjct: 103 AAKYRQASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLAD 162
Query: 79 ADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGV 137
A A+ +N + GKPIR+ + +D G N+FI NLD +D K LY+ FSAFG
Sbjct: 163 AQRALDTMNFDTIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGK 222
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKG 196
I+++ K+M D D G SRG+ F+ + + A+D AIE MNG L + ++ V + +KD +
Sbjct: 223 ILSS-KVMSD-DQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA 279
Query: 197 ERHGTPAE 204
E E
Sbjct: 280 ELRNKANE 287
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 21/199 (10%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N+ Y+ N + +E L E+F + G ++V V D + +G+GFV F S E A
Sbjct: 286 NEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKK 344
Query: 82 AIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVD 124
A++ +N + G+ + V +A Q++ G L+I NLD +D
Sbjct: 345 AVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNLDDTID 404
Query: 125 EKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
++ L+ FS+FG I + KIMR+ G S+GFG I + S E + A+ MNG+ L ++ +
Sbjct: 405 DEKLWREFSSFGSI-SRVKIMREE--GRSKGFGLICFSSPEEATKAMAEMNGRILGSKPL 461
Query: 185 TVSYAYKKDTKGERHGTPA 203
++ A K + HG P
Sbjct: 462 YIALAQKPXERNAYHGRPC 480
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L+E F G +++ V D +GY FV F+++ AD AI+ +
Sbjct: 199 VFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSD--DQGSRGYAFVHFQNQIAADRAIEEM 256
Query: 87 NMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N L + R ++ ++ + + N++I N D+D++ L + FS +G +
Sbjct: 257 NGALLKDCRLFVGRFKNRKDREAELRNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTL 316
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ K+M D +G S+GFGF+S+DS EA+ A+E MNG+ + + + V A KK +
Sbjct: 317 S-VKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKSER 370
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q R Q Y+ NLD + +E LW F G + V + ++ +G+G + F
Sbjct: 381 LKQERFRRCQGMKLYIKNLDDTIDDEKLWREFSSFGSISRVKIMRE--EGRSKGFGLICF 438
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRV 98
S E+A A+ +N L KP+ +
Sbjct: 439 SSPEEATKAMAEMNGRILGSKPLYI 463
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 5/181 (2%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q A+ Y G+L P V E +L+E+F GPV ++ V +D VT GY ++ F + DA+ A
Sbjct: 47 QFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERA 106
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ LN + G+P R+ + +D GA N+++ NLD ++D K LYDTFS FG I++
Sbjct: 107 LDTLNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILS- 165
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGT 201
K+ PD G SRGFGF+ ++S E+++AAI +NG + + TV A K T G+
Sbjct: 166 CKVALTPD-GKSRGFGFVHFESDESAEAAIAKLNGMQIGEK--TVYVAQFKKTADRSDGS 222
Query: 202 P 202
P
Sbjct: 223 P 223
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 25/169 (14%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVP-----KDRVTNLHQGYGFVEFRS 75
R+ YV NLD + + L++ F G +++ V K R G+GFV F S
Sbjct: 133 RSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSR------GFGFVHFES 186
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-------ANLFIGNLDPDVDEKLL 128
+E A+ AI LN +++ K + V +Q KK+ D N++I ++ P E+ +
Sbjct: 187 DESAEAAIAKLNGMQIGEKTVYV---AQFKKTADRSDGSPKNFTNVYIKHIPPSWTEEKI 243
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
+ F AFG I T+ + DP R F F+++ FE + AA+E M+G+
Sbjct: 244 REEFGAFGEI-TSFAMQTDP---KGRRFAFVNFAEFEQARAAVEDMDGE 288
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 8/199 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ PQVT+ LL ELF AG + + + ++ YGFV++ A +AI
Sbjct: 47 SVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVT 102
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN ++G+PI+VN A + D N+F+G+L P+V + LY FS + ++ +
Sbjct: 103 LNGRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPS-CSDAR 161
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK-KDTKGERHGTP 202
+M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K E+ +
Sbjct: 162 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSD 221
Query: 203 AERILAANNPSSQKSRPHT 221
++ ++ N SS++ + T
Sbjct: 222 SKIVVELINGSSEEGQETT 240
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 52/228 (22%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G N+ GQ +++ + +D + +VG+L P+VT+ L+ F + V
Sbjct: 105 GRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMW 164
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN------KASQDKKSLDVG- 111
D+ T +G+GFV FR+++DA AI L L + IR N AS +K+S D
Sbjct: 165 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKI 224
Query: 112 ---------------------------ANLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++GNL P+V L+ F + I+ + +
Sbjct: 225 VVELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVR 284
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
+ RD +GFGF+ Y + + AI+ N + L + I S+ K
Sbjct: 285 VQRD------KGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSK 326
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV--PKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YVG LDP+VTE++L ++F G VV+V + K++ + YGFVEF A+ A++
Sbjct: 94 YVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQT 153
Query: 86 LNMIKLYGKPIRVNKASQ----DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN +++ IRVN A Q +K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 154 LNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS-VSE 212
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF+++ +D A+ +M+G++L +R I ++A +K
Sbjct: 213 ARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF--GFISYDSFEASDAAI 171
L++G LDP V E +L F G +V+ KI+ D + NS+G+ GF+ +D A++ A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVS-VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAM 151
Query: 172 EAMNGQYLCNRQITVSYAY------KKDTKGERH 199
+ +NG+ + +I V++AY K+DT H
Sbjct: 152 QTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH 185
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
T YVGNL P T+ L LF G V+ + DR G+ F++ + E+A AI
Sbjct: 310 TTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADR------GFAFIKMDTHENAAMAIC 363
Query: 85 VLNMIKLYGKPIRV 98
LN + G+P++
Sbjct: 364 QLNGYNVNGRPLKC 377
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV--PKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YVG LDP+VTE++L ++F G VV+V + K++ + YGFVEF A+ A++
Sbjct: 94 YVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQT 153
Query: 86 LNMIKLYGKPIRVNKASQ----DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN +++ IRVN A Q +K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 154 LNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS-VSE 212
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF+++ +D A+ +M+G++L +R I ++A +K
Sbjct: 213 ARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF--GFISYDSFEASDAAI 171
L++G LDP V E +L F G +V+ KI+ D + NS+G+ GF+ +D A++ A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVS-VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAM 151
Query: 172 EAMNGQYLCNRQITVSYAY------KKDTKGERH 199
+ +NG+ + +I V++AY K+DT H
Sbjct: 152 QTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH 185
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
T YVGNL P T+ L LF G V+ + DR G+ F++ + E+A AI
Sbjct: 310 TTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADR------GFAFIKMDTHENAAMAIC 363
Query: 85 VLNMIKLYGKPIRV 98
LN + G+P++
Sbjct: 364 QLNGYNVNGRPLKC 377
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVG+L+ V E L++LF Q PVV+ V +D+ GY +V F + +DA A+
Sbjct: 32 NRSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAM 91
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+VLN L GKPIR+ + +D + G AN+FI NLD +D K LY+TF++FG +++
Sbjct: 92 EVLNFTPLNGKPIRIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLS-C 150
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D + G S+G+GFI +++ E + +AI +NG + +R++ V ++ + E +G+P
Sbjct: 151 KVAVD-NNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSP 209
Query: 203 AERILAANNPSSQKS 217
+ N S S
Sbjct: 210 KFTNVYVKNLSETTS 224
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 11/211 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
+ R+ A ++ NLD ++ + L+E F GPV++ V D +GYGF++F +EE
Sbjct: 114 TTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLSCKVAVDN-NGQSKGYGFIQFENEE 172
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-----ANLFIGNLDPDVDEKLLYDTF 132
DA AI LN + + + + V + + ++ N+++ NL ++ L F
Sbjct: 173 DAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSPKFTNVYVKNLSETTSDEDLKKIF 232
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
S++G I T+ +M+D + G SRGFGF+++ S +++ AA+E +NG ++ V Y +
Sbjct: 233 SSYGAI-TSAIVMKDQN-GKSRGFGFVNFQSPDSAAAAVEKLNGMTFSDK---VWYVGRA 287
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLF 223
KGER + N +K + L+
Sbjct: 288 QRKGEREAELKAKFEQERNSRYEKMKAANLY 318
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL ++E L ++F G + + V KD+ +G+GFV F+S + A A++ L
Sbjct: 214 VYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQ-NGKSRGFGFVNFQSPDSAAAAVEKL 272
Query: 87 NMIKLYGKPIRVNKA--------------SQDKKSLD---VGANLFIGNLDPDVDEKLLY 129
N + K V +A Q++ S ANL++ NL +DE+ L
Sbjct: 273 NGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEKMKAANLYLKNLGDTIDEERLK 332
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS FG I T+ K+M D G S+G GF+++ + E + A+ MNG+ + + + V+ A
Sbjct: 333 ELFSEFGSI-TSCKVMLDQQ-GLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVAIA 390
Query: 190 YKKDTKGER 198
+++ + R
Sbjct: 391 QRREERMAR 399
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+LDP VTE +L+E+F V +V + +D +T GY +V + S DA+ A+
Sbjct: 12 ASLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALD 71
Query: 85 VLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + +P R+ +D S + N+F+ NLD +D K L+DTFS FG I++ K
Sbjct: 72 TLNFTCIRSRPCRIMWCLRDPASRRNNEGNVFVKNLDKSIDNKTLFDTFSLFGNIMS-CK 130
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPA 203
I D + GNS G+GFI ++ E++ AI +NG L +R I V +K +
Sbjct: 131 IATDSE-GNSLGYGFIHFEHPESAKEAIARLNGMILGDRPIYVGKFQRKAERFSEKDKTF 189
Query: 204 ERILAANNPSS-QKSRPHTLF 223
+ + P + + HTLF
Sbjct: 190 TNVYVKHIPKTWSEETLHTLF 210
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
++ RN + +V NLD + + L++ F G +++ + D N GYGF+ F E
Sbjct: 93 ASRRNNEGNVFVKNLDKSIDNKTLFDTFSLFGNIMSCKIATDSEGN-SLGYGFIHFEHPE 151
Query: 78 DADYAIKVLNMIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFS 133
A AI LN + L +PI V KA + + N+++ ++ E+ L+ F
Sbjct: 152 SAKEAIARLNGMILGDRPIYVGKFQRKAERFSEKDKTFTNVYVKHIPKTWSEETLHTLFG 211
Query: 134 AFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 175
+G I + +++ G R FGF++++ E++ A+ ++
Sbjct: 212 VYGKI--SSLVLQSDSKG--RPFGFVNFEDPESAKKAVANLH 249
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 102 SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISY 161
S + + V A+L++G+LDPDV E +LY+ F++ V V++ +I RD T S G+ +++Y
Sbjct: 2 STNNNIVQVSASLYVGDLDPDVTETMLYEIFNSVAV-VSSVRICRDALTRRSLGYAYVNY 60
Query: 162 DSFEASDAAIEAMNGQYLCNR 182
+S ++ A++ +N + C R
Sbjct: 61 NSVADAERALDTLN--FTCIR 79
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 13 LLGQHSAERN-----QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQG 67
L QH A R Q YV NL +TE L LF G + +V + D + + +G
Sbjct: 343 LKSQHEAARESQNRYQGVNLYVKNLSESMTESDLRSLFEPYGTISSVSIKTDE-SGISRG 401
Query: 68 YGFVEFRSEEDADYAIKVLNMIKLYGKPIRV 98
+GFV F S ++A AI +++ + GKP+ V
Sbjct: 402 FGFVSFLSPDEATKAITEMHLKLVRGKPLYV 432
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 99 NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGF 158
++A+++ ++ G NL++ NL + E L F +G I + ++ ++G SRGFGF
Sbjct: 347 HEAARESQNRYQGVNLYVKNLSESMTESDLRSLFEPYGTISSVS--IKTDESGISRGFGF 404
Query: 159 ISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
+S+ S + + AI M+ + + + + V +K+ + R
Sbjct: 405 VSFLSPDEATKAITEMHLKLVRGKPLYVGLHERKEQRALR 444
>gi|291401234|ref|XP_002716993.1| PREDICTED: poly(A) binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 370
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE+LL++ F + GPV+++ + +D VT GY +V F DA A+
Sbjct: 10 ASLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GK IR+ + +D G N+FI NLD +D K LY+ FSAFG I++ K
Sbjct: 70 TMNFDVVKGKAIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKSLYECFSAFGKILS-SK 128
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGERHGTP 202
+M D D G S+G+ F+ + S A+D AIE MNG++L + ++ V + +KD + E
Sbjct: 129 VMSD-DRG-SKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREAELRNKA 186
Query: 203 AE 204
+E
Sbjct: 187 SE 188
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI--- 83
++ NLD + + L+E F G +++ V D +GY FV F+S+ AD AI
Sbjct: 100 VFIKNLDKSIDNKSLYECFSAFGKILSSKVMSD--DRGSKGYAFVHFQSQSAADRAIEEM 157
Query: 84 --KVLNMIKLY-GK-PIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
K L K++ G+ R ++ ++ + N++I N D+D++ L + FS +G I+
Sbjct: 158 NGKFLKDCKVFVGRFKSRKDREAELRNKASEFTNVYIKNFGDDMDDERLREVFSTYGRIL 217
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M + G SRGFGF+S+DS EA+ A+E MNG+ + + I V A KK
Sbjct: 218 S-VKVMTNS-CGKSRGFGFVSFDSHEAARKAVEEMNGKEVNGQPIFVGRAQKK 268
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 21/170 (12%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L E+F G +++V V + +G+GFV F S E A A++ +
Sbjct: 192 VYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGK-SRGFGFVSFDSHEAARKAVEEM 250
Query: 87 NMIKLYGKPIRVNKA--------------SQDKKSL---DVGANLFIGNLDPDVDEKLLY 129
N ++ G+PI V +A Q KK GA L+I NLD ++D++ L
Sbjct: 251 NGKEVNGQPIFVGRAQKKVERQAELKQMFEQLKKERIRGCQGAKLYIKNLDENIDDEKLR 310
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
FS+FG I + K+M++ G S+GFG I + S E + A+ MNG+ L
Sbjct: 311 KEFSSFGSI-SRVKVMQEE--GQSKGFGLICFSSSEDAARAMTVMNGRIL 357
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 110/177 (62%), Gaps = 9/177 (5%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +VTE +L+E F AGP++++ V +D VT+ GY +V F+ DA+ +
Sbjct: 110 ASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAERVMT 169
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N+ + GKP+R+ + +D +KS +G N+F+ NL+ ++ K LYD FS+FG I++
Sbjct: 170 DMNLYIIKGKPVRLMWSQRDPSLRKS-GIG-NVFVKNLEKSINNKSLYDAFSSFGNILSC 227
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
I D S+G+GF+ ++ E+++ AI+ MNG L + +I V + +KD + E
Sbjct: 228 KVI---TDDNGSKGYGFVHFEHRESAERAIQKMNGILLNDLKIFVGHFKSRKDRESE 281
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 16/184 (8%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
+V NL+ + + L++ F G +++ V D N +GYGFV F E A+ AI+ +
Sbjct: 200 VFVKNLEKSINNKSLYDAFSSFGNILSCKVITD--DNGSKGYGFVHFEHRESAERAIQKM 257
Query: 87 NMIKLYGKPIRVN--KASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVI 138
N I L I V K+ +D++S ++GA N++I N D+DE L F FG
Sbjct: 258 NGILLNDLKIFVGHFKSRKDRES-ELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPT 316
Query: 139 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK---DTK 195
++ K+MRD D G S+GFGF+++ E + AI+ MNG+ L RQI A KK T+
Sbjct: 317 LS-VKVMRD-DCGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQKKLERQTQ 374
Query: 196 GERH 199
+RH
Sbjct: 375 LQRH 378
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 105/194 (54%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N + E+ L ++F + GP ++V V +D +G+GFV F+ ED
Sbjct: 284 AQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGR-SKGFGFVNFQKHED 342
Query: 79 ADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDV----------GANLFIGNLDP 121
A AI +N +L G+ I ++ + +Q ++ + G NL+I NLD
Sbjct: 343 AQNAIDNMNGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIKNLDD 402
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
D+D++ L FS+FG I T+ K+M + G S+GFGF+ + + E + A+ MNG+ + +
Sbjct: 403 DIDDENLRKEFSSFGTI-TSAKVM--MNNGRSKGFGFVCFSAPEEATTAVTEMNGRLVAS 459
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 460 KPLYVALAQRKEER 473
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L Q+ R Q Y+ NLD + +E L + F G + + V + +G+GFV F
Sbjct: 382 LKQNRIVRYQGVNLYIKNLDDDIDDENLRKEFSSFGTITSAKVMMN--NGRSKGFGFVCF 439
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFI 116
+ E+A A+ +N + KP+ V A + ++ AN ++
Sbjct: 440 SAPEEATTAVTEMNGRLVASKPLYVALAQRKEERKAHLANQYV 482
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE+LL+ F AGPV+++ + +D++T GY +V F DA A+
Sbjct: 287 ASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLADAQKALD 346
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GK IR+ + +D G N+FI NLD +D K LY+ FSAFG I+++ K
Sbjct: 347 TMNFDVIQGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGRILSS-K 405
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGERHGTP 202
+M D D G S+G+ F+ + + A+D AIE MNG+ L ++ V + ++D + E
Sbjct: 406 VMSD-DQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQDREAELRSKA 463
Query: 203 AE 204
+E
Sbjct: 464 SE 465
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L+E F G +++ V D +GY FV F+++ AD AI+ +N
Sbjct: 378 FIKNLDKSIDNKTLYEHFSAFGRILSSKVMSD--DQGSKGYAFVHFQNQSAADRAIEEMN 435
Query: 88 MIKLYGKPIRVN--KASQDKKS-LDVGA----NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
L G + V K+ QD+++ L A N++I N D+D++ L D FS +G ++
Sbjct: 436 GKLLQGCKVFVGRFKSRQDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLS 495
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+M D +G S+GFGF+S+DS EA+ A+E MNG+ + + I V+ A KK
Sbjct: 496 -VKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVARAQKK 545
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 21/181 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ++F + G ++V V D + +G+GFV F S E A A++ +N
Sbjct: 470 YIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMN 528
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGAN----------LFIGNLDPDVDEKLLYD 130
+ G+ I +V + ++ K+ + N L++ NLD +D++ L
Sbjct: 529 GRDINGQLIFVARAQKKVERQAELKQMFEQLKNERIRGCQVVKLYVKNLDDTIDDEKLRK 588
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS+FG I + K+M++ G S+GFG I + S E + A+ MNG+ L ++ ++++ A
Sbjct: 589 EFSSFGSI-SRVKVMQEE--GQSKGFGLICFSSPEDALKAMTEMNGRILGSKPLSIALAQ 645
Query: 191 K 191
+
Sbjct: 646 R 646
>gi|389748929|gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
Length = 682
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 104/172 (60%), Gaps = 13/172 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++ LN
Sbjct: 47 YVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNVTDGERALEQLN 106
Query: 88 MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKL----------LYDTFSAFG 136
+ G+ R+ + +D G N+FI NLD +D K+ L+DTF+AFG
Sbjct: 107 YSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDELIDNKVRTAQKTPPHALHDTFAAFG 166
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+++ K+ D + G SRG+G++ Y++ EA+++AI+A+NG L ++++ V Y
Sbjct: 167 NVLS-CKVATD-EQGRSRGYGYVHYETAEAAESAIKAVNGMLLNDKKVYVGY 216
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NLD +VT++ ELF Q G V + + D +G+GFV F + E A A+ L+
Sbjct: 238 YVKNLDLEVTQDQFVELFSQFGAVTSAVIQTDE-EGKSKGFGFVNFENHEQAAKAVDTLH 296
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
GK + V++A + +K S G NL+I NL+ DVD++ L
Sbjct: 297 DTDFNGKKLFVSRAQKKAEREEELRKSYESAKMEKLSKYQGVNLYIKNLEDDVDDEKLRA 356
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F FG I T+ K+MRD D G S+GFGF+ + S + + A+ MN + + ++ + VS A
Sbjct: 357 EFEPFGTI-TSCKVMRD-DKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQ 414
Query: 191 KKDTK 195
+++ +
Sbjct: 415 RREVR 419
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 28 YVGNLDPQVTEEL----------LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
++ NLD + ++ L + F G V++ V D +GYG+V + + E
Sbjct: 135 FIKNLDELIDNKVRTAQKTPPHALHDTFAAFGNVLSCKVATDE-QGRSRGYGYVHYETAE 193
Query: 78 DADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYD 130
A+ AIK +N + L K + +++ + K ++ A NL++ NLD +V + +
Sbjct: 194 AAESAIKAVNGMLLNDKKVYVGYHISRKERQSKLEEMRAHFTNLYVKNLDLEVTQDQFVE 253
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS FG + + +++ + G S+GFGF+++++ E + A++ ++ +++ VS A
Sbjct: 254 LFSQFGAVTS--AVIQTDEEGKSKGFGFVNFENHEQAAKAVDTLHDTDFNGKKLFVSRAQ 311
Query: 191 KKDTKGE 197
KK + E
Sbjct: 312 KKAEREE 318
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEA 173
L++G LDP V E +L++ F+ G V + ++ RD T S G+ +++Y + + A+E
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGP-VASIRVCRDAVTRRSLGYAYVNYLNVTDGERALEQ 104
Query: 174 MNGQYLCNRQITVSY-----AYKKDTKGERHGTPAERILAANNPSSQKSRPHTL 222
+N + R + + A +K +G + ++ ++QK+ PH L
Sbjct: 105 LNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDELIDNKVRTAQKTPPHAL 158
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 108/172 (62%), Gaps = 13/172 (7%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L +++E LL++LF + GP++++ + +D +T GY +V F++ +DA+ A+
Sbjct: 6 ASLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAERALD 65
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN + G PIR+ + +D +KS +G N+FI NLD +D K LYDTFSAFG I++
Sbjct: 66 TLNYASVKGIPIRIMWSQRDPSIRKS-GIG-NIFIKNLDKSIDNKALYDTFSAFGNILS- 122
Query: 142 PKIMRDPDTGN-------SRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ + G+ S G+GF+ +++ EA++ AI +NG L +Q+ V
Sbjct: 123 CKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKINGMLLNGKQVFV 174
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 141/352 (40%), Gaps = 60/352 (17%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPK---------DRVTNLHQGYGFVEFRSEED 78
++ NLD + + L++ F G +++ V + D V + GYGFV F ++E
Sbjct: 97 FIKNLDKSIDNKALYDTFSAFGNILSCKVCQATKKGDNGGDNVESA--GYGFVHFETQEA 154
Query: 79 ADYAIKVLNMIKLYGKPIRVN---KASQDKKSL---DVGANLFIGNLDPDVDEKLLYDTF 132
A+ AI +N + L GK + V K ++ K L D N+++ NLD VDEK L + F
Sbjct: 155 AEKAIAKINGMLLNGKQVFVGPFVKKTERLKILSNEDSFTNIYVKNLDASVDEKELSEVF 214
Query: 133 SAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
S FG I N +MR + G S+ FGFI++ ++ AI+ MN + N+++ V A KK
Sbjct: 215 SKFGEI-QNAVVMR-GENGASKEFGFINFADHASALIAIDEMNEKDFKNKKLFVGRAQKK 272
Query: 193 DTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSL---QNAPQANGTVGGPVPPRPY 249
+ ER E K + L+ + Q G +
Sbjct: 273 N---ERRAKLKEYFQKLKQEKVNKYKGLNLYVKNLDDSVDDERLRQEFSKFGDITSAKVM 329
Query: 250 ANGAASGPISAVRPPPPPPQAAAFPPM-----------------------QVAGQAAWQG 286
++ S V P A M Q+ Q +
Sbjct: 330 SDNKQSRGFGFVCFKTPEAANKALTEMSGHMIGSKPLYVNFAQPKELRRSQLEAQYNARK 389
Query: 287 QPQHIGQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQP 338
QPQ I Q +PQ +P F PPP Q+ +P QP+ G Q
Sbjct: 390 QPQMIPQMMPQFFIPAQGAF-------PPPGSQI-----KPRWQPVAGGRQS 429
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 22 NQDA--TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDA 79
N+D+ YV NLD V E+ L E+F + G + N V + + +GF+ F A
Sbjct: 189 NEDSFTNIYVKNLDASVDEKELSEVFSKFGEIQNAVVMRGE-NGASKEFGFINFADHASA 247
Query: 80 DYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPD 122
AI +N K + V +A Q+K + G NL++ NLD
Sbjct: 248 LIAIDEMNEKDFKNKKLFVGRAQKKNERRAKLKEYFQKLKQEKVNKYKGLNLYVKNLDDS 307
Query: 123 VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
VD++ L FS FG I T+ K+M D SRGFGF+ + + EA++ A+ M+G + ++
Sbjct: 308 VDDERLRQEFSKFGDI-TSAKVM--SDNKQSRGFGFVCFKTPEAANKALTEMSGHMIGSK 364
Query: 183 QITVSYA 189
+ V++A
Sbjct: 365 PLYVNFA 371
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L+ VTE +L+E+F G V ++ V +D VT GY +V + + DA+ A+
Sbjct: 16 ASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D GA N+F+ NLD +D K L+DTFS FG I++ K
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILS-CK 134
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S+ +GF+ Y+ E++ AIE +NG L ++ + V + KK +
Sbjct: 135 VATD-EFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSER 185
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D + YGFV + EE A AI+ +N
Sbjct: 107 FVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGK-SKSYGFVHYEDEESAKEAIEKVN 165
Query: 88 MIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
I+L K + V +A+ D K NL++ N V E L FS FG I +
Sbjct: 166 GIQLGSKNVYVGHFIKKSERATNDTKF----TNLYVKNFPDSVTEAHLKQLFSPFGEITS 221
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR-QITVSYAYKKD 193
++ D N R F FI+Y E++ A+E +NG+ + + QI +Y KK+
Sbjct: 222 ---MIVKTDNKN-RKFCFINYADSESAKNAMENLNGKKITDDGQIDPTYDAKKE 271
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 91 LYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
L K +N S++K G NL+I NLD +D++ L + F +G I T+ K+MRD D
Sbjct: 431 LKAKFDNLNMESKNKHQ---GVNLYIKNLDDAIDDQTLKELFEPYGTI-TSAKVMRD-DK 485
Query: 151 GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
S+GFGF+ + E ++ A+ M+ + + + + V A K++ + R
Sbjct: 486 EQSKGFGFVCFALQEEANRAVTEMHLKIINGKPLYVGLAEKREQRLSR 533
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L S ++Q Y+ NLD + ++ L ELF G + + V +D +G+GFV F
Sbjct: 438 LNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQ-SKGFGFVCF 496
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
+E+A+ A+ +++ + GKP+ V A + ++ L
Sbjct: 497 ALQEEANRAVTEMHLKIINGKPLYVGLAEKREQRL 531
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV--PKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YVG LDP+VTE++L ++F G VV+V + K++ + YGFVEF A+ A++
Sbjct: 94 YVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQT 153
Query: 86 LNMIKLYGKPIRVNKASQ----DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN +++ IRVN A Q +K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 154 LNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS-VSE 212
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF+++ +D A+ +M+G++L +R I ++A +K
Sbjct: 213 ARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 263
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF--GFISYDSFEASDAAI 171
L++G LDP V E +L F G +V+ KI+ D + NS+G+ GF+ +D A++ A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVS-VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAM 151
Query: 172 EAMNGQYLCNRQITVSYAY------KKDTKGERH 199
+ +NG+ + +I V++AY K+DT H
Sbjct: 152 QTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH 185
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGNL P T+ L LF G V+ + DR G+ F++ + E+A AI
Sbjct: 311 TCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADR------GFAFIKMDTHENAAMAICQ 364
Query: 86 LNMIKLYGKPIRVN 99
LN + G+P++ +
Sbjct: 365 LNGYNVNGRPLKCS 378
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 8/199 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ PQVT+ LL ELF AG + + + ++ YGFV++ A +AI
Sbjct: 47 SVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSS----YGFVDYFDRSSAAFAIVT 102
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN ++G+PI+VN A + D N+F+G+L P+V + LY FS + ++ +
Sbjct: 103 LNGRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPS-CSDAR 161
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK-KDTKGERHGTP 202
+M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K E+ +
Sbjct: 162 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSD 221
Query: 203 AERILAANNPSSQKSRPHT 221
++ ++ N SS++ + T
Sbjct: 222 SKIVVELINGSSEEGQETT 240
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 52/228 (22%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G N+ GQ +++ + +D + +VG+L P+VT+ L+ F + V
Sbjct: 105 GRNIFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMW 164
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN------KASQDKKSLDVG- 111
D+ T +G+GFV FR+++DA AI L L + IR N AS +K+S D
Sbjct: 165 DQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKI 224
Query: 112 ---------------------------ANLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++GNL P+V L+ F + I+ + +
Sbjct: 225 VVELINGSSEEGQETTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVR 284
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
+ RD +GFGF+ Y + + AI+ N + L + I S+ K
Sbjct: 285 VQRD------KGFGFVRYSTHAEAALAIQMGNARILFGKPIKCSWGSK 326
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
D Y+GNLD + E+ L + F AG +V+V V D+ N H Y F+E+ + DA+ A+
Sbjct: 30 DKVLYIGNLDKSINEDALKQYFQVAGQIVDVKVMVDKKNN-HVNYAFIEYSTNHDANVAL 88
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSL--DVGANLFIGNLDPDVDEKLLYDTFSAF-GVIVT 140
+ LN I++ K I++N A Q + +L D NLFIG+L+ +VD+ L + F + G +
Sbjct: 89 QTLNGIQIENKNIKINWAFQSQTNLNDDTSFNLFIGDLNVNVDDTTLANAFKSCPGFL-- 146
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
+M D T SRG+GF+S+D+ E + AA++ M G + R I +++A K++
Sbjct: 147 QAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQGHEINGRAIRINWATKRE 199
>gi|74199920|dbj|BAE20776.1| unnamed protein product [Mus musculus]
Length = 266
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 6/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P VTE +L+E F AGP++++ V +D +T GY V F DA+ A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALD 70
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + GKP+R+ + +D + VG N+FI NL+ +D K LYDTFSAFG I++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSLRRSGVG-NVFIKNLNKTIDNKALYDTFSAFGNILSCK 129
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D S+G GF+ +++ EA++ AIE MNG L +R++ V
Sbjct: 130 VV---SDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFV 170
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NL+ + + L++ F G +++ V D N +G+GFV F +EE
Sbjct: 92 SLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDE--NGSKGHGFVHFETEE 149
Query: 78 DADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYD 130
A+ AI+ +N + L + + V + SQ ++ ++G N++I N +D++ L
Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNG 209
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F FG I++ K+M D + G S+GFGF+S++ E + A++ MNG+ L + I V A
Sbjct: 210 LFGRFGQILS-VKVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRA 266
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR---VTNLHQGYGFVEFRSEEDADYAIK 84
YVG LDP+VTE++L ++F G VV+V + D+ T YGFVEF A+ A++
Sbjct: 94 YVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPGAAERAMQ 153
Query: 85 VLNMIKLYGKPIRVNKASQD----KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
LN +++ IRVN A Q K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 154 TLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGS-VS 212
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF+++ +D A+ +M+G++L +R I ++A +K
Sbjct: 213 EARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQK 264
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPD---TGNSRGFGFISYDSFEASDAA 170
L++G LDP V E +L F G +V+ KI+ D + T +GF+ +D A++ A
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVS-VKIIPDKNGQFTTKGHNYGFVEFDDPGAAERA 151
Query: 171 IEAMNGQYLCNRQITVSYAY------KKDTKGERH 199
++ +NG+ + +I V++AY K+DT H
Sbjct: 152 MQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFH 186
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGNL P T+ L LF G V+ + DR G+ FV+ S E+A AI
Sbjct: 312 TCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADR------GFAFVKMDSHENAASAICQ 365
Query: 86 LNMIKLYGKPIRV 98
LN + G+P++
Sbjct: 366 LNGYNVNGRPLKC 378
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 103/174 (59%), Gaps = 7/174 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVTE LL E+F GPV + + + ++ YGFV + A AI
Sbjct: 55 SVYVGNIHIQVTEPLLQEVFASTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAILS 110
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L+G+PI+VN A + D + N+F+G+L P+V + +L++ FS + ++ +
Sbjct: 111 LNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFNCFSVYPS-CSDAR 169
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+M D TG SRGFGF+S+ + + + AI+ + G++L +RQI ++A K T GE
Sbjct: 170 VMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGE 223
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 53/229 (23%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G +L GQ +++ + +D ++ +VG+L P+VT+ +L+ F + V
Sbjct: 113 GRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFNCFSVYPSCSDARVMW 172
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
D+ T +G+GFV FR+++DA AI + L + IR N A+ +DK+S D +
Sbjct: 173 DQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKS 232
Query: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++GNL P+V + L+ F + G ++ +
Sbjct: 233 VVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVR 292
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ-YLCNRQITVSYAYK 191
+ RD +GFGF+ Y + + AI N YL RQ+ S+ K
Sbjct: 293 VQRD------KGFGFVRYSTHVEAALAISMGNTHSYLSGRQMKCSWGSK 335
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 110/202 (54%), Gaps = 23/202 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNL-----HQGYGFVEFRSEED- 78
A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ D
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRFLPTRRSLGYAYINFQQPADG 70
Query: 79 ------ADYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLY 129
A+ A+ +N L G+PIR+ + +D +KS VG N+FI NL+ +D K LY
Sbjct: 71 EEQAQRAERALDTMNFEMLKGQPIRIMWSQRDPGLRKS-GVG-NIFIKNLEDSIDNKALY 128
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
DTFS FG I++ + D SRGFGF+ +++ EA+ AI MNG L +R++ V +
Sbjct: 129 DTFSTFGNILSCKVVC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHF 185
Query: 190 YKKDTKGERHGTPAERILAANN 211
++ ER R L N
Sbjct: 186 ---KSRREREAELGARALEFTN 204
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 14/186 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL+ + + L++ F G +++ V D + +G+GFV F + E A AI +N
Sbjct: 114 FIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGS--RGFGFVHFETHEAAQQAINTMN 171
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V S+ ++ ++GA N+++ NL DVDE+ L D FS FG +++
Sbjct: 172 GMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLS 231
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
K+MRD ++G+SR FGF++++ E + A+ MNG+ + R + YA + + ER
Sbjct: 232 -VKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLL---YAGRAQKRVERQN 286
Query: 201 TPAERI 206
R
Sbjct: 287 ELKRRF 292
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N
Sbjct: 206 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMN 264
Query: 88 MIKLYGKPI-----------------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
++ G+ + R + QD+ G NL++ NLD +D+ L
Sbjct: 265 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 324
Query: 131 TFSAFGVIVTNPKI--------MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR 182
FS +GVI + + DP G +S EA+ A E MNG+ + +
Sbjct: 325 EFSPYGVITSAKGVGAGYPFWGSADP-VGTCSPSAALSGLKEEATKAVTE-MNGRIVGTK 382
Query: 183 QITVSYAYKKDTK 195
+ V+ A +K+ +
Sbjct: 383 PLYVALAQRKEER 395
>gi|399217460|emb|CCF74347.1| unnamed protein product [Babesia microti strain RI]
Length = 679
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L P+VTE +L+E+F GPV ++ V +D +T GY +V + + DA A++
Sbjct: 41 ASLYVGDLSPEVTEAILYEIFNTIGPVASIRVCRDSITRKSLGYAYVNYHNVNDARRALE 100
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
L ++ GK +R+ + +D GA N+FI N+D +D K LYD FS +G I++ K
Sbjct: 101 ALKYNEICGKQVRIMWSHRDPSLRKSGAGNVFIKNIDESIDTKALYDAFSPYGQILS-CK 159
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
+ D +TG SRG+GF+ +D+ + AI NG L N++I V+
Sbjct: 160 VATD-ETGRSRGYGFVHFDTEANATRAISDANGMQLGNKKIFVA 202
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 22/224 (9%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ ++ N+D + + L++ F G +++ V D T +GYGFV F +E
Sbjct: 122 SLRKSGAGNVFIKNIDESIDTKALYDAFSPYGQILSCKVATDE-TGRSRGYGFVHFDTEA 180
Query: 78 DADYAIKVLNMIKLYGKPI----------RVNKASQDKKSLDVGANLFIGNLDPDVDEKL 127
+A AI N ++L K I RV+ + + NL++ N + +E++
Sbjct: 181 NATRAISDANGMQLGNKKIFVAPFVRRSERVSSTKLEDGVDEKFTNLYVRNFPENWNEEI 240
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + FS FG I T+ + DP R F FI+Y + AAIE MNG + ++
Sbjct: 241 LKENFSPFGEI-TSMMMKSDPL---GRKFAFINYAENSMAKAAIETMNG-----KDFSIK 291
Query: 188 YAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQ 231
K +GE ++L ++R H + + S+
Sbjct: 292 SGDKSTIEGEDTDKSETKLLVC--AHQDRARRHAMLKAKYDSMH 333
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
A+L++G+L P+V E +LY+ F+ G + + ++ RD T S G+ +++Y + + A+
Sbjct: 41 ASLYVGDLSPEVTEAILYEIFNTIGPVAS-IRVCRDSITRKSLGYAYVNYHNVNDARRAL 99
Query: 172 EAMNGQYLCNRQITVSYAYK 191
EA+ +C +Q+ + ++++
Sbjct: 100 EALKYNEICGKQVRIMWSHR 119
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 49/210 (23%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N EE+L E F G + ++ + D L + + F+ + A AI+ +N
Sbjct: 228 YVRNFPENWNEEILKENFSPFGEITSMMMKSDP---LGRKFAFINYAENSMAKAAIETMN 284
Query: 88 MIKLYGKPIRVNK---------------------ASQDK------------------KSL 108
GK + A QD+ KS
Sbjct: 285 -----GKDFSIKSGDKSTIEGEDTDKSETKLLVCAHQDRARRHAMLKAKYDSMHAENKSK 339
Query: 109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
G NL+I NLD +++ L + F FG+I T+ K+M D + G S GFGF+ + S E +
Sbjct: 340 YQGVNLYIKNLDDSINDAELRELFEGFGLI-TSCKVMVD-EHGASLGFGFVCFVSPEDAT 397
Query: 169 AAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
A+ M+ + + N+ + V A K++ + R
Sbjct: 398 HAVSEMHLKLVHNKPLYVGLAEKREQRLNR 427
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYA 82
Q Y+ NLD + + L ELF G + + V D G+GFV F S EDA +A
Sbjct: 341 QGVNLYIKNLDDSINDAELRELFEGFGLITSCKVMVDE-HGASLGFGFVCFVSPEDATHA 399
Query: 83 IKVLNMIKLYGKPIRVNKASQDKKSLD 109
+ +++ ++ KP+ V A + ++ L+
Sbjct: 400 VSEMHLKLVHNKPLYVGLAEKREQRLN 426
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+L P+V++ L F + GPV++ V +D T GYG+V F + A+ A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+VLN L G+PIR+ + +D G N+FI NLD +++K LYDTFS FG I++
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS-C 130
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
KI+ D + G S+G+GF+ ++ E ++ AIE +N + +R + V
Sbjct: 131 KIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 32/273 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N P+ E L E+F + G + + V KD +G+GFV F + A+ A+K ++
Sbjct: 195 YIKNFPPETDNEKLKEMFNEFGEIKSACVMKDS-EGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 88 MIKLYGKPIRVNKA------------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
++ G+ + +A ++ + S + NL++ NLD ++D+K L
Sbjct: 254 GKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLE 313
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS G I T+ K+M+D + S+GFGF+ + + E + A+ MNG + ++ + V+ A
Sbjct: 314 EAFSVHGSI-TSAKVMKDANN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 190 YKK-DTKGERHGTPAERILAANNPSSQ-------KSRPHTLFASGPPSLQNAPQANGTVG 241
+K D + + +R+ NP + + PH+ F PP+ Q + G
Sbjct: 372 QRKEDRRAKLIEEHQQRMAQYRNPVASMIPAVPGHAAPHSFF---PPAFQQTQRFYHPSG 428
Query: 242 GPVPPRPYANGAASGPISAVRPPPPPPQAAAFP 274
+ +P N AA P P PP A +P
Sbjct: 429 AVLSSQPRWNRAAGIPAQIGGLPNRPPVAGYYP 461
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + ++ L++ F G +++ + D +GYGFV F EE A+ AI+ +N
Sbjct: 104 FIKNLDKSIEQKELYDTFSFFGRILSCKIVMDE-NGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 88 MIKLYGKPIRVNKA--SQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ + + + V K ++KS NL+I N P+ D + L + F+ FG I +
Sbjct: 163 NMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEI-KSA 221
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+M+D + G S+GFGF+ + + ++ A++ M+G+ + R + + A +K+ + E
Sbjct: 222 CVMKDSE-GKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQE 275
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+L P+V++ L F + GPV++ V +D T GYG+V F + A+ A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+VLN L G+PIR+ + +D G N+FI NLD +++K LYDTFS FG I++
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS-C 130
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
KI+ D + G S+G+GF+ ++ E ++ AIE +N + +R + V
Sbjct: 131 KIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 32/273 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N P+ E L E+F + G + + V KD +G+GFV F + A+ A+K ++
Sbjct: 195 YIKNFPPETDNEKLKEMFNEFGEIKSACVMKDS-EGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 88 MIKLYGKPIRVNKA------------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
++ G+ + +A ++ + S + NL++ NLD ++D+K L
Sbjct: 254 GKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLE 313
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS G I T+ K+M+D + S+GFGF+ + + E + A+ MNG + ++ + V+ A
Sbjct: 314 EAFSVHGSI-TSAKVMKDANN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 190 YKK-DTKGERHGTPAERILAANNPSSQ-------KSRPHTLFASGPPSLQNAPQANGTVG 241
+K D + + +R+ NP + + PH+ F PP+ Q + G
Sbjct: 372 QRKEDRRAKLIEEHQQRMAQYRNPVASMIPAVPGHAAPHSFF---PPAFQQTQRFYHPSG 428
Query: 242 GPVPPRPYANGAASGPISAVRPPPPPPQAAAFP 274
+ +P N AA P P PP A +P
Sbjct: 429 AVLSSQPRWNRAAGIPAQIGGLPNRPPVAGYYP 461
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + ++ L++ F G +++ + D +GYGFV F EE A+ AI+ +N
Sbjct: 104 FIKNLDKSIEQKELYDTFSFFGRILSCKIVMDE-NGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 88 MIKLYGKPIRVNKA--SQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ + + + V K ++KS NL+I N P+ D + L + F+ FG I +
Sbjct: 163 NMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEI-KSA 221
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+M+D + G S+GFGF+ + + ++ A++ M+G+ + R + + A +K+ + E
Sbjct: 222 CVMKDSE-GKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQE 275
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L V E L +F Q P+V+V V +D V+ + GYG+V F S ++A A++
Sbjct: 37 SSLYVGDLAESVDETQLHAVFSQVAPLVSVRVCRDIVSGVSLGYGYVNFYSRQEATCALE 96
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L GK IRV +++D G ANLF+ NL+P +D K LY+ FS+FG I++ K
Sbjct: 97 ALNFAPLSGKHIRVMFSNRDPSLRKSGRANLFVKNLEPSIDSKNLYEMFSSFGTILS-CK 155
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D G S+G+GF+ Y++ E++ AI +NG +R++ V ++ +
Sbjct: 156 VATDS-AGQSKGYGFVQYETEESAQDAINRLNGMLANDREMFVGLHMRRRNR 206
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 3/175 (1%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S ++ A +V NL+P + + L+E+F G +++ V D +GYGFV++ +EE
Sbjct: 118 SLRKSGRANLFVKNLEPSIDSKNLYEMFSSFGTILSCKVATDSAGQ-SKGYGFVQYETEE 176
Query: 78 DADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
A AI LN + + + V + + N++I NL + + L F+ FG
Sbjct: 177 SAQDAINRLNGMLANDREMFVGLHMRRRNREVKFTNVYIKNLPTEFSDDDLRQEFAPFGE 236
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
I T+ +MRD + G S+ FGF++++ E + A++ NG+ + ++ + V A KK
Sbjct: 237 I-TSAVVMRDVN-GVSKCFGFVNFEKPEFALEAVKKANGKVINDKTLYVGRAQKK 289
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 156/366 (42%), Gaps = 44/366 (12%)
Query: 13 LLGQHSAERNQDA---TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYG 69
+G H RN++ Y+ NL + +++ L + F G + + V +D V + + +G
Sbjct: 196 FVGLHMRRRNREVKFTNVYIKNLPTEFSDDDLRQEFAPFGEITSAVVMRD-VNGVSKCFG 254
Query: 70 FVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDV-- 110
FV F E A A+K N + K + V +A +DKK +D
Sbjct: 255 FVNFEKPEFALEAVKKANGKVINDKTLYVGRAQKKAERQAELKTKFKQEDRDKK-VDKPN 313
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G NL++ N+D ++++ L F FG VT+ K+M D G S+G GF+ + + EA +A
Sbjct: 314 GINLYLKNIDDSINDEGLKILFEEFGQ-VTSCKVMVDAQ-GRSKGSGFVLFATAEAGHSA 371
Query: 171 IEAMNGQYLCNRQITVSYAY-KKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPS 229
I MNG+ + + + V A K++ + A+R LA +S + P ++ P
Sbjct: 372 INGMNGRIVGKKPLYVGLAQPKEERRAMLMAHFAQRNLAM--AASPYAGPQQVYFGHPAP 429
Query: 230 LQNAPQANGTVGGPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAAWQGQPQ 289
Q PQA G P P A GP+S V P Q + +P + G AA++ Q
Sbjct: 430 GQIPPQA-AVFGFPQHFVP-----AMGPVSPVM-MPHNMQRSRYPRQRTGGPAAYRQQQA 482
Query: 290 HIGQGVPQPV--MPPPMQFRPPPNMPPPPPPQLASAMQRPPPQPMGMGAQPPVWRQPPPP 347
I + MP P +P P + S Q G V P
Sbjct: 483 MIHANANHNIRYMPNARHGAYPAMLPQGFPSAMVS------QQHDGSSITTAVASAEPAD 536
Query: 348 PQQLLG 353
QQ+LG
Sbjct: 537 QQQILG 542
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG++ P VTE LL+E+F GPV ++ V +D VT GY +V F + DA+ A+
Sbjct: 45 ASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALD 104
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + G P R+ + +D G N+F+ NLD +D K LYDTFS FG I++ K
Sbjct: 105 TMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILS-CK 163
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ + TGNS+G+G++ Y++ EA+ AI +NG + ++ V K+ +
Sbjct: 164 VAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGQFQKRQDR 215
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 27/194 (13%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVT-NLHQGYGFVEFRSEEDADYAIK 84
YV N+ Q T+ L + F G V++ V KD + ++G+GFV + + A A+
Sbjct: 223 NCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVD 282
Query: 85 VLNMIKLY--GKPI-------RVNKASQDKKSLD--------------VGANLFIGNLDP 121
LN K Y G+ + + K S+ ++ L G NL++ NLD
Sbjct: 283 ALNG-KSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDD 341
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+ + L + F+ G I T+ ++MRDP+ GNSRGFGF+ + + E ++ A+ MNG+ +
Sbjct: 342 QLSDDELREAFAECGTI-TSSRVMRDPN-GNSRGFGFVCFSTPEEANKAVAEMNGKLISG 399
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 400 KPVYVALAQRKEVR 413
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V + T +GYG+V + + E A AI +N
Sbjct: 136 FVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKIN 195
Query: 88 MIKLYGKPIRVNK--ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIM 145
+ + G + V + QD+ D N ++ N+ + L F FG +++ +
Sbjct: 196 GMLIAGTEVFVGQFQKRQDRPDADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMK 255
Query: 146 RDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ 177
+ + ++RGFGF++Y+ +A+ A++A+NG+
Sbjct: 256 DNANPDHNRGFGFVNYEESDAAHKAVDALNGK 287
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+L P+V++ L F + GPV++ V +D T GYG+V F + A+ A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRHSLGYGYVNFEDPKHAEQAL 71
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+VLN L G+PIR+ + +D G N+FI NLD +++K LYDTFS FG I++
Sbjct: 72 EVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS-C 130
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
KI+ D + G S+G+GF+ ++ E ++ AIE +N + +R + V
Sbjct: 131 KIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 32/273 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N P+ E L E+F + G + + V KD +G+GFV F + A+ A+K ++
Sbjct: 195 YIKNFPPETDNEKLKEMFNEFGEIKSACVMKDS-EGKSKGFGFVCFLDPDHAENAVKTMH 253
Query: 88 MIKLYGKPIRVNKA------------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
++ G+ + +A ++ + S + NL++ NLD ++D+K L
Sbjct: 254 GKEIEGRALYCARAQRKEERQEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLE 313
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS G I T+ K+M+D + S+GFGF+ + + E + A+ MNG + ++ + V+ A
Sbjct: 314 EAFSVHGSI-TSAKVMKDANN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 190 YKK-DTKGERHGTPAERILAANNPSSQ-------KSRPHTLFASGPPSLQNAPQANGTVG 241
+K D + + +R+ NP + + PH+ F PP+ Q + G
Sbjct: 372 QRKEDRRAKLIEEHQQRMAQYRNPVASMIPAVPGHAAPHSFF---PPAFQQTQRFYHPSG 428
Query: 242 GPVPPRPYANGAASGPISAVRPPPPPPQAAAFP 274
+ +P N AA P P PP A +P
Sbjct: 429 AVLSSQPRWNRAAGIPAQIGGLPNRPPVAGYYP 461
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 95/175 (54%), Gaps = 8/175 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + ++ L++ F G +++ + D +GYGFV F EE A+ AI+ +N
Sbjct: 104 FIKNLDKSIEQKELYDTFSFFGRILSCKIVMDE-NGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 88 MIKLYGKPIRVNKA--SQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ + + + V K ++KS NL+I N P+ D + L + F+ FG I +
Sbjct: 163 NMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFNEFGEI-KSA 221
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+M+D + G S+GFGF+ + + ++ A++ M+G+ + R + + A +K+ + E
Sbjct: 222 CVMKDSE-GKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQE 275
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 4/171 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E LL+++F G V ++ V +D +TN GY +V F E AI+
Sbjct: 38 ASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIE 97
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GKP R+ + +D G+ N++I NL P +D K L++TFS FG I++ K
Sbjct: 98 QLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILS-CK 156
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY-AYKKD 193
+ D D G SRGFGF+ +++ + AIEA+NG + ++++ V++ KKD
Sbjct: 157 VATD-DNGVSRGFGFVHFENESDARDAIEAVNGMLMNDQEVYVAWHVSKKD 206
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 23/200 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D + ++E +LF + G + + + KD L +G+GF+ F A A+ LN
Sbjct: 222 YVKNIDLETSQEEFEQLFSKYGKITSAVLEKDSEGKL-RGFGFINFEDHSTAARAVDELN 280
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
G+ + V +A + KK + G NLFI NLD +D++ L D
Sbjct: 281 ESDFRGQTLYVGRAQKKHERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEKLKD 340
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ FG I T+ K+M+D + G+SRGFGF+ + + E + AI N Q + + + V+ A
Sbjct: 341 EFAPFGTI-TSVKVMKD-EAGSSRGFGFVCFSTPEEATKAITEKNQQLVAGKPLYVAIAQ 398
Query: 191 KKDTKGERHGTPAERILAAN 210
+K+ R A++I A N
Sbjct: 399 RKEV---RRNQLAQQIQARN 415
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NL P + + L E F G +++ V D + +G+GFV F +E DA AI+ +N
Sbjct: 129 YIKNLHPAIDNKSLHETFSTFGNILSCKVATDD-NGVSRGFGFVHFENESDARDAIEAVN 187
Query: 88 MIKLYGKPI----RVNKASQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ + + + V+K + K +V A N+++ N+D + ++ FS +G I +
Sbjct: 188 GMLMNDQEVYVAWHVSKKDRQSKLEEVKAKFTNIYVKNIDLETSQEEFEQLFSKYGKITS 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
++ G RGFGFI+++ + A++ +N + + V A KK +
Sbjct: 248 --AVLEKDSEGKLRGFGFINFEDHSTAARAVDELNESDFRGQTLYVGRAQKKHER 300
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
GA+L++G LDP V E LLYD FS G V++ ++ RD T S G+ ++++ EA A
Sbjct: 37 GASLYVGELDPSVSEALLYDIFSPIGS-VSSIRVCRDAITNTSLGYAYVNFHDHEAGRKA 95
Query: 171 IEAMN 175
IE +N
Sbjct: 96 IEQLN 100
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
+ Q ++ NLD + +E L + F G + +V V KD + +G+GFV F + E+A
Sbjct: 318 KYQGVNLFIKNLDDSIDDEKLKDEFAPFGTITSVKVMKDEAGS-SRGFGFVCFSTPEEAT 376
Query: 81 YAIKVLNMIKLYGKPIRV 98
AI N + GKP+ V
Sbjct: 377 KAITEKNQQLVAGKPLYV 394
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 111/180 (61%), Gaps = 4/180 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+A+ YVG+L+ V E L++LF + GP+ ++ V +D TN GY +V F + +DA A+
Sbjct: 5 NASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDE-TNRSLGYAYVNFVNPQDAANAM 63
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ LN L GK IRV +++D G AN+FI NLD +D K L+DTF+AFG ++++
Sbjct: 64 EHLNFTPLNGKSIRVMFSNRDPSIRKSGYANVFIKNLDISIDNKTLHDTFAAFGFVLSS- 122
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
K+ D G S+G+GF+ +D+ E++ AI+ +NG + ++++ V + + + G+P
Sbjct: 123 KVAVDS-IGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERAQVDGSP 181
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 21/189 (11%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N T+E L +LF G + + V KD + +GFV F S + A A++
Sbjct: 184 TNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKD-TDGKSRCFGFVNFESPDSAVAAVE 242
Query: 85 VLNMIKLYGKPI----RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEK 126
LN + + R + ++ + L G NL++ NLD ++++
Sbjct: 243 RLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDYNINDD 302
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L + FS FG I T+ K+M +P+ G S+G+GF+++ + ++ A+ MNG+ + R + V
Sbjct: 303 KLKELFSEFGTI-TSCKVMLEPN-GRSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYV 360
Query: 187 SYAYKKDTK 195
+ A +K+ +
Sbjct: 361 AVAQRKEER 369
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 20 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYV---PKDRVTNLHQGYGFVEFRSE 76
E+ YV NLD + ++ L ELF + G + + V P R +GYGFV F +
Sbjct: 283 EKYHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGR----SKGYGFVAFSAP 338
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKA--SQDKKSL 108
+A+ A+ +N + +P+ V A +++K+L
Sbjct: 339 RNANRALHEMNGKMIGRRPLYVAVAQRKEERKAL 372
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 96/172 (55%), Gaps = 5/172 (2%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
D YVGNLD + E++L + F GP+ NV V D+ N Y FVE+ DA A+
Sbjct: 76 DKILYVGNLDKSINEDILKQYFQVGGPITNVKVINDK--NNEANYAFVEYSQHHDASIAL 133
Query: 84 KVLNMIKLYGKPIRVNKA--SQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
K LN ++ +++N A SQ + D NLFIG+L+ DVD++ L F F +
Sbjct: 134 KTLNGKQIENNTLKINWAFQSQQNTTSDETFNLFIGDLNVDVDDETLVAAFKDFKSFI-Q 192
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKD 193
+M D TG SRG+GF+S+ + + + A++ M G L RQ+ +++A K++
Sbjct: 193 AHVMWDMQTGRSRGYGFVSFSNLDDAQVAMDTMQGSELNGRQLRINWASKRE 244
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%)
Query: 16 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRS 75
Q + ++ ++G+L+ V +E L F + +V D T +GYGFV F +
Sbjct: 155 QQNTTSDETFNLFIGDLNVDVDDETLVAAFKDFKSFIQAHVMWDMQTGRSRGYGFVSFSN 214
Query: 76 EEDADYAIKVLNMIKLYGKPIRVNKASQ 103
+DA A+ + +L G+ +R+N AS+
Sbjct: 215 LDDAQVAMDTMQGSELNGRQLRINWASK 242
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYV--PKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
YVG LDP+VTE++L ++F G VV+V + K++ + YGFVEF A+ A++
Sbjct: 94 YVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQT 153
Query: 86 LNMIKLYGKPIRVNKASQ----DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
LN +++ IRVN A Q +K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 154 LNGRRIHQSEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSAFGS-VSE 212
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF+++ ++ A+ +M+G++L +R I ++A +K
Sbjct: 213 ARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQK 263
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 46/204 (22%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L +V +E+L + F G V V D T +GYGFV FR DA+ A+ ++
Sbjct: 187 FVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMD 246
Query: 88 MIKLYGKPIRVNKASQDKK-------------------------------SLDV------ 110
L + IR N A+Q + S D+
Sbjct: 247 GEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTP 306
Query: 111 --GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
++GNL P + L F FG ++ ++ D RGF FI DS E +
Sbjct: 307 QWQTTCYVGNLTPYTSQNDLVPLFQNFGFVL-ETRLQAD------RGFAFIKMDSHENAA 359
Query: 169 AAIEAMNGQYLCNRQITVSYAYKK 192
AI +NG + R + S+ +
Sbjct: 360 MAICQLNGYNVNGRPLKCSWGKDR 383
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF--GFISYDSFEASDAAI 171
L++G LDP V E +L F G +V+ KI+ D + NS+G+ GF+ +D A++ A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVS-VKIIPDKNKFNSKGYNYGFVEFDDPGAAERAM 151
Query: 172 EAMNGQYLCNRQITVSYAY------KKDTKGERH 199
+ +NG+ + +I V++AY K+DT H
Sbjct: 152 QTLNGRRIHQSEIRVNWAYQSNNTNKEDTSNHFH 185
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGNL P ++ L LF G V+ + DR G+ F++ S E+A AI
Sbjct: 311 TCYVGNLTPYTSQNDLVPLFQNFGFVLETRLQADR------GFAFIKMDSHENAAMAICQ 364
Query: 86 LNMIKLYGKPIRV 98
LN + G+P++
Sbjct: 365 LNGYNVNGRPLKC 377
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 103/164 (62%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L + E L+E F AGPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + KPIR+ + +D + VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDLIRNKPIRIMWSQRDPSLRRSGVG-NVFIKNLDKAIDNKAIYDTFSAFGNILS-C 119
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D + GNS+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 120 KVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 102/183 (55%), Gaps = 11/183 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V D N +GYGFV F +EE
Sbjct: 83 SLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGN-SKGYGFVHFETEE 141
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYD 130
A+ +I +N + L GK + V K + +K L A LF + N + D++ L +
Sbjct: 142 AANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEEFDDEKLKE 201
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN-RQITVSYA 189
F +G I T+ K+M D G S+GFGF++Y++ EA++AA++A+NG+ + + + V+ A
Sbjct: 202 FFEPYGKI-TSYKVMSKED-GKSKGFGFVAYETTEAAEAAVQALNGKDMGEGKSLYVARA 259
Query: 190 YKK 192
KK
Sbjct: 260 QKK 262
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 21/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N + +E L E F G + + Y + +G+GFV + + E A+ A++ LN
Sbjct: 186 YVKNFTEEFDDEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAYETTEAAEAAVQALN 244
Query: 88 MIKL-YGKPIRVNKASQD-------KKSLD----------VGANLFIGNLDPDVDEKLLY 129
+ GK + V +A + K+ + G NL++ NLD +D++ L
Sbjct: 245 GKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERLR 304
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M D D G S+GFGF+ + S + A+ +NG+ + ++ + V+ A
Sbjct: 305 KEFSLYGTI-TSAKVMTD-DEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALA 362
Query: 190 YKKDTK 195
+K+ +
Sbjct: 363 QRKEER 368
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH-QGYGFVEFRSEEDADYAIKVL 86
YVG LDP+VTE++L ++F G VV+V + D+ N YGFVEF A+ A++ L
Sbjct: 94 YVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQTL 153
Query: 87 NMIKLYGKPIRVNKASQ----DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
N +++ IRVN A Q +K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 154 NGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS-VSEA 212
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF+++ +D A+ +M+G++L +R I ++A +K
Sbjct: 213 RVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQK 262
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRG--FGFISYDSFEASDAAI 171
L++G LDP V E +L F G +V+ KI+ D + NS+G +GF+ +D A++ A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVS-VKIIPDKNF-NSKGYNYGFVEFDDPGAAERAM 150
Query: 172 EAMNGQYLCNRQITVSYAY------KKDTKGERH 199
+ +NG+ + +I V++AY K+DT H
Sbjct: 151 QTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFH 184
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
T YVGNL P T+ L LF G V+ + DR G+ F++ + E+A AI
Sbjct: 310 TCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADR------GFAFIKMDTHENAAMAICQ 363
Query: 86 LNMIKLYGKPIRVN 99
LN + G+P++ +
Sbjct: 364 LNGYNVNGRPLKCS 377
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 116/193 (60%), Gaps = 7/193 (3%)
Query: 5 IAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTN 63
++PG ++ + + E N+ A YVG LDP+VTE++L ++F G V +V +P +
Sbjct: 63 LSPGSASSFARRAAPEPNKRAL-YVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDKNFQS 121
Query: 64 LHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD----KKSLDVGANLFIGNL 119
YGFVE+ + A+ A++ LN +++ + IRVN A Q K+ ++F+G+L
Sbjct: 122 KGYNYGFVEYDDPQCAERAMQTLNGRRVHQQEIRVNWAYQSNTISKEDTSNHFHIFVGDL 181
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
+V++++L FSAFG V+ ++M D TG SRG+GF+S+ ++ A+ +M+G++L
Sbjct: 182 SNEVNDEVLLQAFSAFGT-VSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWL 240
Query: 180 CNRQITVSYAYKK 192
+R I ++A +K
Sbjct: 241 GSRAIRCNWANQK 253
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 83/212 (39%), Gaps = 46/212 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L +V +E+L + F G V V D T +GYGFV FR DA+ A+ ++
Sbjct: 177 FVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMD 236
Query: 88 MIKLYGKPIRVNKA--------SQDKKSLDVG---------------------------- 111
L + IR N A SQ + + +G
Sbjct: 237 GEWLGSRAIRCNWANQKGQPSYSQAQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTP 296
Query: 112 ---ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
++GNL P + L F FG VT + D RGF F+ D+ E +
Sbjct: 297 QWQTTCYVGNLTPYTTQNDLVPLFQNFG-YVTETRFHSD------RGFAFVKMDTHENAA 349
Query: 169 AAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
AI ++G + R + S+ + G+ G
Sbjct: 350 NAICQLSGYNVNGRPLKCSWGKDRPPTGQFDG 381
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
T YVGNL P T+ L LF G V DR G+ FV+ + E+A AI
Sbjct: 300 TTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFHSDR------GFAFVKMDTHENAANAIC 353
Query: 85 VLNMIKLYGKPIRVN 99
L+ + G+P++ +
Sbjct: 354 QLSGYNVNGRPLKCS 368
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L+ VTE +L+E+F G V ++ V +D VT GY +V + + DA+ A+
Sbjct: 16 ASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D GA N+F+ NLD +D K L+DTFS FG I++ K
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILS-CK 134
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S+ +GF+ Y+ E++ AIE +NG L ++ + V + KK +
Sbjct: 135 VATD-EFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSER 185
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 17/174 (9%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D + YGFV + EE A AI+ +N
Sbjct: 107 FVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGK-SKSYGFVHYEDEESAKEAIEKVN 165
Query: 88 MIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
I+L K + V +A+ D K NL++ N V E L + FS +G I +
Sbjct: 166 GIQLGSKNVYVGHFIKKSERATNDTKF----TNLYVKNFPDSVTETHLKELFSPYGEITS 221
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR-QITVSYAYKKD 193
++ D N R F FI+Y E++ A+E +NG+ + + QI +Y KK+
Sbjct: 222 ---MIVKTDNKN-RKFCFINYADSESAKNAMENLNGKKITDDGQIDPTYDGKKE 271
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 91 LYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
L K +N S++K G NL+I NLD +D++ L + F +G I T+ K+MRD D
Sbjct: 431 LKAKFDNLNMESKNKHQ---GVNLYIKNLDDAIDDQTLKELFEPYGTI-TSAKVMRD-DK 485
Query: 151 GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
S+GFGF+ + E ++ A+ M+ + + + + V A K++ + R
Sbjct: 486 EQSKGFGFVCFALQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSR 533
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L S ++Q Y+ NLD + ++ L ELF G + + V +D +G+GFV F
Sbjct: 438 LNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQ-SKGFGFVCF 496
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
+E+A+ A+ +++ + GKP+ V A + ++ L
Sbjct: 497 ALQEEANKAVTEMHLKIINGKPLYVGLAEKREQRL 531
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVTE LL E+F GPV + + + ++ YGFV + A AI
Sbjct: 55 SVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAILS 110
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L+G+PI+VN A + D + N+F+G+L P+V + +L+ FS + ++ +
Sbjct: 111 LNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPT-CSDAR 169
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+M D TG SRGFGF+S+ + + + AI+ + G++L +RQI ++A K T GE
Sbjct: 170 VMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGE 223
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 50/226 (22%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G +L GQ +++ + +D ++ +VG+L P+VT+ +L+ F + V
Sbjct: 113 GRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMW 172
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
D+ T +G+GFV FR+++DA AI + L + IR N A+ +DK+S D +
Sbjct: 173 DQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKS 232
Query: 113 -------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMR 146
+++GNL P+V + L+ F + G ++ ++ R
Sbjct: 233 VVELTSGDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQR 292
Query: 147 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQ-YLCNRQITVSYAYK 191
D +GFGF+ Y + + AI+ N YL RQ+ S+ K
Sbjct: 293 D------KGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSK 332
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 29/187 (15%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED------ 78
A+ YVGNL +TE +L+E F AGPV+++ V +D +T GY +V F+ D
Sbjct: 11 ASLYVGNLHTDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADVVVVGD 70
Query: 79 ----------------ADYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNL 119
A+ A+ +N + G+PIR+ + +D +KS VG N+FI NL
Sbjct: 71 GGSGGGGCGSGSGSQRAERALDTMNFDIIKGRPIRIMWSQRDPSLRKS-GVG-NVFIKNL 128
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D ++D K +YDTFSAFG I++ K+ +D ++G S+G+GF+ +++ EA++ +IE +NG L
Sbjct: 129 DKNIDNKAMYDTFSAFGNILS-CKVTQD-ESGASKGYGFVHFETEEAANKSIEKVNGMLL 186
Query: 180 CNRQITV 186
+++ V
Sbjct: 187 NGKKVYV 193
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 26/189 (13%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVN--VYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N +T++ L E+F + G + + V + D + +G+GFV F A+ A+
Sbjct: 216 VYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKS---RGFGFVAFEDPNSAEQAVL 272
Query: 85 VLNMIKL-YGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEK 126
LN ++ GK + V +A + K+ + G NL++ NLD +D++
Sbjct: 273 DLNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDE 332
Query: 127 LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
L F+ FG I T+ K+M + G S+GFGF+ + E + A+ MNG+ + ++ + V
Sbjct: 333 RLRKEFTPFGTI-TSAKVMMEE--GRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYV 389
Query: 187 SYAYKKDTK 195
+ A +K+ +
Sbjct: 390 ALAQRKEDR 398
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVTE LL E+F GPV + + + ++ YGFV + A AI
Sbjct: 55 SVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAILS 110
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L+G+PI+VN A + D + N+F+G+L P+V + +L+ FS + ++ +
Sbjct: 111 LNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPT-CSDAR 169
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
+M D TG SRGFGF+S+ + + + AI+ + G++L +RQI ++A K T GE
Sbjct: 170 VMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGE 223
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 53/229 (23%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G +L GQ +++ + +D ++ +VG+L P+VT+ +L+ F + V
Sbjct: 113 GRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMW 172
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
D+ T +G+GFV FR+++DA AI + L + IR N A+ +DK+S D +
Sbjct: 173 DQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKS 232
Query: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++GNL P+V + L+ F + G ++ +
Sbjct: 233 VVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVR 292
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ-YLCNRQITVSYAYK 191
+ RD +GFGF+ Y + + AI+ N YL RQ+ S+ K
Sbjct: 293 VQRD------KGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSK 335
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 111/196 (56%), Gaps = 8/196 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVTE LL E+F GPV + + + ++ YGF+ + A AI
Sbjct: 54 SVYVGNIHTQVTEPLLQEVFASTGPVESCKLIRKEKSS----YGFIHYFDRRSAALAILS 109
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++ +
Sbjct: 110 LNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYHS-CSDAR 168
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGTP 202
+M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K T ++ +
Sbjct: 169 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGATSNDDKQSSD 228
Query: 203 AERILAANNPSSQKSR 218
A+ ++ N SS++ +
Sbjct: 229 AKSVVELTNGSSEEGK 244
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 42/200 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 141 FVGDLSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 200
Query: 88 MIKLYGKPIRVNKASQ------DKKSLDVGA----------------------------N 113
L + IR N A++ DK+S D +
Sbjct: 201 GKWLGSRQIRCNWATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDAPENNPQYTT 260
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GNL P+V + L+ F + G ++ ++ RD +GFGF+ + + + AI+
Sbjct: 261 VYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRD------KGFGFVRFSTHAEAALAIQ 314
Query: 173 AMNGQ-YLCNRQITVSYAYK 191
N Q L +QI S+ K
Sbjct: 315 MGNTQSILYGKQIKCSWGSK 334
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Q T YVGNL P+VT+ L F + AG + V V +D+ G+GFV F + +A
Sbjct: 257 QYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDK------GFGFVRFSTHAEAA 310
Query: 81 YAIKVLNMIK-LYGKPIRVNKASQ 103
AI++ N LYGK I+ + S+
Sbjct: 311 LAIQMGNTQSILYGKQIKCSWGSK 334
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+LDP V+E L++LF Q G V+++ V +D +T GY +V + + +DA A++
Sbjct: 4 TSLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATRALE 63
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+LN + GK +R+ + +D G AN+FI NLD +D K L+DTF +FG I++ K
Sbjct: 64 LLNFTPVNGKAVRIMFSHRDPSIRKSGTANIFIKNLDRAIDNKALHDTFVSFGNILS-CK 122
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
+ D + G S+G+GF+ ++ E++ AI+ +NG + +Q+ V
Sbjct: 123 VATDSN-GQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFV 164
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 20 ERNQDA---TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSE 76
ER Q+ +V NL T++ L E+F G + + V +D + +GFV F +
Sbjct: 172 EREQNGKFNNVFVKNLGESTTDDELKEVFGAFGKITSAVVMRDS-DGKSKCFGFVNFENP 230
Query: 77 EDADYAIKVLNMIKLYGKPIRVNKASQD---------------KKSLDV--GANLFIGNL 119
++A A+ LN K+ K V +A + K+ +D GANL++ NL
Sbjct: 231 DEAAKAVVGLNGKKIEDKEWYVGRAQKKSEREAELRAKYEQERKERIDRYQGANLYLKNL 290
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
D DVD++ L + F+ FG I T+ K+MRD G S+G GF++Y + E ++ A MNG+ +
Sbjct: 291 DDDVDDERLREIFADFGSI-TSCKVMRDAQ-GQSKGSGFVAYSAPEEANRATIEMNGKMI 348
Query: 180 CNRQITVSYAYKKDTK 195
++ I V+ A +K+ +
Sbjct: 349 GSKPIYVAMAQRKEER 364
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDA 169
V +L++G+LDP+V E LYD F+ G +++ ++ RD T S G+ +++Y++ + +
Sbjct: 2 VSTSLYVGDLDPNVSENQLYDLFNQIGQVLS-IRVCRDLMTRRSLGYAYVNYNNVQDATR 60
Query: 170 AIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPP- 228
A+E +N + + + + +++ +D + GT I + K+ T + G
Sbjct: 61 ALELLNFTPVNGKAVRIMFSH-RDPSIRKSGTANIFIKNLDRAIDNKALHDTFVSFGNIL 119
Query: 229 SLQNAPQANGTVGG 242
S + A +NG G
Sbjct: 120 SCKVATDSNGQSKG 133
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 8/196 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVTE LL E+F GPV + + ++ YGFV + A AI
Sbjct: 54 SVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRRSAALAILS 109
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L+G+PI+VN A + D N+F+G+L P+V + +L+ FSA+ ++ +
Sbjct: 110 LNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSS-CSDAR 168
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGTP 202
+M D TG SRGFGF+S+ + + + AI + G++L +RQI ++A K E + G+
Sbjct: 169 VMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSD 228
Query: 203 AERILAANNPSSQKSR 218
+ ++ +N SS+ +
Sbjct: 229 TKSVVELSNGSSEDGK 244
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 53/229 (23%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G +L GQ +++ + +D + +VG+L P+VT+ +L+ F + V
Sbjct: 112 GRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMW 171
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
D+ T +G+GFV FR++++A AI L L + IR N A+ +DK+ D +
Sbjct: 172 DQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKS 231
Query: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++GNL P+V + L+ F + G ++ +
Sbjct: 232 VVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVR 291
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ-YLCNRQITVSYAYK 191
I RD +GFGF+ Y++ + AI+ N + +LC RQI S+ K
Sbjct: 292 IQRD------KGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSK 334
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ PQVTE LL E+F G + + + ++ YGFV++ A +I
Sbjct: 45 SVYVGNIHPQVTEPLLQEVFSNTGLIEGCKLIRKEKSS----YGFVDYFDRRSAALSIVT 100
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L+G+PI+VN A + D N+F+G+L P+V + LY +F+ F ++ +
Sbjct: 101 LNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYASFALFPS-CSDAR 159
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGTP 202
+M D TG SRGFGF+S+ + + + AI +NG+++ +RQI ++A K T ++ +
Sbjct: 160 VMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDDKQSSD 219
Query: 203 AERILAANNPSSQKSR 218
A+ ++ N +S+ S+
Sbjct: 220 AKSVVELTNGTSEDSQ 235
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 51/227 (22%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G +L GQ +++ + +D + +VG+L P+VT+ L+ F + V
Sbjct: 103 GRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLYASFALFPSCSDARVMW 162
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ------DKKSLDVGA 112
D+ T +G+GFV FR+++DA AI LN + + IR N A++ DK+S D +
Sbjct: 163 DQKTGRSRGFGFVSFRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDDKQSSDAKS 222
Query: 113 ---------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKI 144
+++GNL P+V L+ F G + + ++
Sbjct: 223 VVELTNGTSEDSQEKNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGLGAGTIEDVRV 282
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
RD +GFGF+ Y + + AI+ N + L + + S+ K
Sbjct: 283 QRD------KGFGFVRYSTHAEAALAIQMGNARILYGKPVKCSWGSK 323
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
++ YVG+L VT+ L+E+F Q GPV N+ + +D T Y +V + + DA+ A+
Sbjct: 8 SSLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAERALD 67
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + GK R+ + +D G N+FI NLD VD K L+DTFSAFG I++ K
Sbjct: 68 TLNNTLVKGKACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTFSAFGNILS-CK 126
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
++ D +T S+GFGF+ Y+S +++D AI +NG + ++++ V
Sbjct: 127 VVTD-ETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFV 168
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 16 QHSAERNQD-----ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGF 70
+ S ER Q YV NL V EE L +L V G + N+ + D + +G+GF
Sbjct: 172 KSSKERGQTQELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSK-SKGFGF 230
Query: 71 VEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-------KKSLDV---GANLFIGNLD 120
F + ++A ++ N +GK I V +A + K + G NL+I N+D
Sbjct: 231 ANFETPDEAKNCVEAENGKLFHGKVIYVGRAQKKMEREAELKHKFETKYQGVNLYIKNID 290
Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
+D L TF+A+G I T+ K+MRD + +S+GFGF+ Y + + + A+ M+G+ +
Sbjct: 291 DSIDSDKLRSTFAAYGTI-TSAKVMRDDKSTSSKGFGFVCYTTPDEASKAVAEMHGRMVG 349
Query: 181 NRQITVSYAYKKDTK 195
N+ + V++A +K+ +
Sbjct: 350 NKPLYVAFAQRKEIR 364
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 103/170 (60%), Gaps = 6/170 (3%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YVG LDP+VTE++L ++F G V NV +P + YGFVE+ A+ A++ L
Sbjct: 86 YVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDKNFQSKGYNYGFVEYDDPGAAERAMQTL 145
Query: 87 NMIKLYGKPIRVNKASQD----KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
N +++ + IRVN A Q K+ ++F+G+L +V++++L FSAFG V+
Sbjct: 146 NGRRVHQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGT-VSEA 204
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
++M D TG SRG+GF++Y ++ A+ +M+G++L +R I ++A +K
Sbjct: 205 RVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNWANQK 254
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 128/346 (36%), Gaps = 90/346 (26%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L +V +E+L + F G V V D T +GYGFV +R +A+ A+ ++
Sbjct: 178 FVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMD 237
Query: 88 MIKLYGKPIRVNKA-------------------------------SQDKKSLDVGAN--- 113
L + IR N A +Q +S ++ N
Sbjct: 238 GEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHTFPTQGSQSYEMVVNQTP 297
Query: 114 -----LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASD 168
++GNL P + L F FG VT + D RGF F+ D+ E +
Sbjct: 298 QWQTTCYVGNLTPYTTQNDLVPLFQNFG-YVTETRFQSD------RGFAFVKMDTHENAA 350
Query: 169 AAIEAMNGQYLCNRQITVSYAYKKDTKGERHG-TPAERILAANNPSSQKSRPHTLFASGP 227
AI ++G + R + S+ + G+ G PA+ + Q + P + GP
Sbjct: 351 NAICQLSGYNVNGRPLKCSWGKDRPPTGQFDGYNPAQ--------TPQSAVPQSAVYPGP 402
Query: 228 PSL-----------QNAPQAN--GTVG-GPVPPRPYANGAASGPISAVRPPPPPPQAAAF 273
P +PQA G G P+P G+ +SA PP +
Sbjct: 403 PQAFFPQYGQPSAPAMSPQAATPGQFGQHPLP------GSFQSTMSATAMQHPP--GSWV 454
Query: 274 PPMQVAGQAAWQGQPQHIGQGVPQPVMPPPMQFRPPPNMPPPPPPQ 319
P Q+ PQ G Q P F P P MP P PQ
Sbjct: 455 TPGQM---------PQSAGGYSSQN----PGGFMPQPGMPQPGLPQ 487
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF--GFISYDSFEASDAAI 171
L++G LDP V E +L F G V N KI+ D + S+G+ GF+ YD A++ A+
Sbjct: 85 LYVGGLDPRVTEDVLKQIFETTG-HVQNVKIIPDKNF-QSKGYNYGFVEYDDPGAAERAM 142
Query: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAAN 210
+ +NG+ + ++I V++AY+ +T + + I +
Sbjct: 143 QTLNGRRVHQQEIRVNWAYQSNTNTKEDTSNHFHIFVGD 181
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
T YVGNL P T+ L LF G V DR G+ FV+ + E+A AI
Sbjct: 301 TTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDR------GFAFVKMDTHENAANAIC 354
Query: 85 VLNMIKLYGKPIRVN 99
L+ + G+P++ +
Sbjct: 355 QLSGYNVNGRPLKCS 369
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E F AGP++++ V +D +T GY +V F+ DA ++
Sbjct: 2 ASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLE 61
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N+ + GKP+R+ + +D +KS VG N+F+ NL+ +D + L+D FS FG I++
Sbjct: 62 TMNLDVIKGKPVRIMWSQRDPSLRKS-GVG-NIFVKNLEKSIDNRALFDAFSGFGNILSC 119
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ D S+G+GF+ +++ E+++ AIE MNG L + ++ V +
Sbjct: 120 KVV---SDENGSKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGH 163
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 14/182 (7%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NL+ + L++ F G +++ V D N +GYGFV F ++E A+ AI+ +N
Sbjct: 93 FVKNLEKSIDNRALFDAFSGFGNILSCKVVSDE--NGSKGYGFVHFETQESAEKAIEKMN 150
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
I L + V S+ ++ L++GA N++I N D+D L + F FG ++
Sbjct: 151 GIVLKSLKVFVGHFKSRKERELELGARAREFTNVYIKNFGEDMDNARLGEIFGRFGRALS 210
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK---DTKGE 197
K+M D + G S+GFGF+SY + E + A++ MNG+ L R+I V A KK T+ +
Sbjct: 211 -VKVMTD-ERGRSKGFGFVSYATHEDAQRAVDEMNGKELNGRRIYVGRAQKKGERQTELK 268
Query: 198 RH 199
RH
Sbjct: 269 RH 270
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A + Y+ N + L E+F + G ++V V D +G+GFV + + ED
Sbjct: 176 ARAREFTNVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTDE-RGRSKGFGFVSYATHED 234
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A A+ +N +L G+ I V +A QD+ + G NL++ NLD
Sbjct: 235 AQRAVDEMNGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQDRVTRYQGVNLYVKNLDD 294
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G+SRGFGF+ + + + + A+ MNG+ + +
Sbjct: 295 TIDDERLRTEFSPFGTI-TSAKVM--MEGGHSRGFGFVCFSAPDEAAKAVTEMNGKLVTS 351
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 352 KPLYVALAQRKEER 365
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V F + D + A++
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 106
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG I++
Sbjct: 107 LNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCK-- 164
Query: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
+ ++G S G+GF+ Y++ EA+DAAI+ +NG L ++++ V +
Sbjct: 165 VATSESG-SLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGH 207
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R + Y N+D VT+E +LF + G + + + +D +G+GFV F + ++A
Sbjct: 222 RARFTNVYCKNVDADVTDEEFEKLFTKYGKITSCVLQRDE-DGKSKGFGFVNFENHDEAQ 280
Query: 81 YAIKVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDV 123
A+ L+ G+ + R K S+ ++ L G NL++ N+
Sbjct: 281 TAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESY 340
Query: 124 DEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQ 183
D++ L D F+ FG I T+ KIMR P +G SRGFGF+ Y + E ++ A+ MNG+ L NR
Sbjct: 341 DDERLRDEFAPFGAI-TSCKIMRAP-SGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRP 398
Query: 184 ITVSYAYKKDTK 195
+ V+ A +KD +
Sbjct: 399 LYVALAQRKDVR 410
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 103/164 (62%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L V E L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N L KPIR+ + +D + VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDLLRNKPIRIMWSQRDPSLRRSGVG-NVFIKNLDRAIDNKAIYDTFSAFGNILS-C 119
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D + GNS+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 120 KVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 102/183 (55%), Gaps = 11/183 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V D N +GYGFV F +EE
Sbjct: 83 SLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGN-SKGYGFVHFETEE 141
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYD 130
A+ +I +N + L GK + V K + +K L A LF + N D D++ L +
Sbjct: 142 AANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKE 201
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN-RQITVSYA 189
F +G I T+ K+M D G S+GFGF+++++ EA++AA++A+NG+ + + + V+ A
Sbjct: 202 FFEPYGKI-TSYKVMSKED-GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARA 259
Query: 190 YKK 192
KK
Sbjct: 260 QKK 262
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 21/187 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV N +E L E F G + + Y + +G+GFV F + E A+ A++ L
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 87 NMIKL-YGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLL 128
N + GK + V +A Q + G NL++ NLD +D+ L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303
Query: 129 YDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 188
FS +G I T+ K+M D + G S+GFGF+ +++ + A+ +NG+ + ++ + V+
Sbjct: 304 RIAFSPYGNI-TSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVAL 361
Query: 189 AYKKDTK 195
A +K+ +
Sbjct: 362 AQRKEER 368
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 24/203 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NL TE L ++F GP+ +V V R + YGFVEF A+ A++ L+
Sbjct: 30 HVANLPSTTTERALRDMFASLGPIQSVKVVASR-NSAGLAYGFVEFVDVSSAERAVRTLD 88
Query: 88 MIKLYGKPIRVNKASQDK--KSLDV--------------GANLFIGNLDPDVDEKLLYDT 131
+G PI+V A Q +++ V A+LF+G+L PDVD+ +LY +
Sbjct: 89 GWLCFGIPIKVCWAKQSMHPEAMTVTEPDRSAPTHSNAGNAHLFVGDLSPDVDDSMLYSS 148
Query: 132 FSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
FS +V + ++M D +TG SRGFGF+S+ S ++ I AM GQ+L RQI V++A +
Sbjct: 149 FSRLPSLV-DVRVMYDAETGKSRGFGFVSFRSKRDAETCIAAMQGQWLGGRQIRVNWANQ 207
Query: 192 KDTKGERHGTPAERILAANNPSS 214
K+++ AE NPSS
Sbjct: 208 KNSQLSIMSATAE------NPSS 224
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+A +VG+L P V + +L+ F + +V+V V D T +G+GFV FRS+ DA+ I
Sbjct: 128 NAHLFVGDLSPDVDDSMLYSSFSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCI 187
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDV 110
+ L G+ IRVN A+Q L +
Sbjct: 188 AAMQGQWLGGRQIRVNWANQKNSQLSI 214
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG LDP V+E LL+++F G V ++ V +D VT GY +V F E AI+
Sbjct: 35 ASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIE 94
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+ R+ + +D G+ N+FI NL PD+D K L++TFS FG I+++ K
Sbjct: 95 QLNYTPIKGRLCRIMWSQRDPALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNILSS-K 153
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
I D +TG S+GFGF+ ++ ++ AI+A+NG L ++I V+
Sbjct: 154 IATD-ETGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVA 196
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 20/188 (10%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
YV N++ + T+E ELF + G V++ + K L +G+GFV+F EDA A++
Sbjct: 216 TNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKL-KGFGFVDFEKHEDAAKAVE 274
Query: 85 VLNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKL 127
LN + + + V++A + KK + G NLF+ NLD +D++
Sbjct: 275 ELNGTEFKDQTLFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEK 334
Query: 128 LYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
L + F+ +G I T+ ++MR D G S+GFGF+ + + E + AI N Q + + + V+
Sbjct: 335 LKEEFAPYGTI-TSVRVMR-TDNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVA 392
Query: 188 YAYKKDTK 195
A +KD +
Sbjct: 393 IAQRKDVR 400
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 3/173 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E+F G V+++ V +D VT GY +V + + DA+ A+
Sbjct: 16 ASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+F+ NLD +D K L+DTFS FG I++ K
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGNILS-CK 134
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
+ D + G S+ +GF+ Y+ E++ AIE +NG L ++ + V + KK +
Sbjct: 135 VATD-EFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERA 186
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D + YGFV + EE A AI+ +N
Sbjct: 107 FVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGK-SKNYGFVHYEDEESAKEAIEKVN 165
Query: 88 MIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
++L K + V +A+ D K NL++ N V E L FS +G I +
Sbjct: 166 GMQLGSKNVYVGHFIKKSERATNDTKF----TNLYVKNFPDTVTEAHLKQLFSPYGEITS 221
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
++ D N R F FI+Y +++ A+E +NG+ +
Sbjct: 222 ---MIVKSDNKN-RKFCFINYSDADSARNAMENLNGKKIT 257
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G NL+I NLD ++++ L + F +G I T+ K+M+D D S+GFGF+ + + E ++ A
Sbjct: 406 GVNLYIKNLDDSMNDQTLKELFEPYGTI-TSAKVMKD-DKDQSKGFGFVCFGTHEEANKA 463
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ M+ + + + + V A K++ + R
Sbjct: 464 VTEMHLKIINGKPLYVGLAEKREHRLSR 491
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NLD + ++ L ELF G + + V KD + +G+GFV F + E+A+ A+ ++
Sbjct: 410 YIKNLDDSMNDQTLKELFEPYGTITSAKVMKDD-KDQSKGFGFVCFGTHEEANKAVTEMH 468
Query: 88 MIKLYGKPIRVNKASQDKKSL 108
+ + GKP+ V A + + L
Sbjct: 469 LKIINGKPLYVGLAEKREHRL 489
>gi|405973173|gb|EKC37903.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 465
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 103/165 (62%), Gaps = 8/165 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YV +L P VTE++L++ F AGPV++V V +D +T GY +V F DA+ A+
Sbjct: 10 ASLYVRDLHPDVTEDMLFKKFSTAGPVLSVRVCRDMITRRSLGYAYVNFHQPADAERALD 69
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ +D +KS VG N+FI LD +D K LYDTFSAFG I ++
Sbjct: 70 TMNFDIIKGRPIRITWYQRDPSLRKS-GVG-NVFIKKLDKSIDNKALYDTFSAFGNI-SS 126
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
KI+ D SRG+GF+ +++ EA+ AIE +NG L +++ V
Sbjct: 127 CKIV--CDEHGSRGYGFVHFETDEAARIAIEKVNGMLLNGKKVFV 169
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 17/189 (8%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLH--QGYGFVEFRSEEDADYAIK 84
++ LD + + L++ F G + + + V + H +GYGFV F ++E A AI+
Sbjct: 100 VFIKKLDKSIDNKALYDTFSAFGNISSCKI----VCDEHGSRGYGFVHFETDEAARIAIE 155
Query: 85 VLNMIKLYGKPIRVNKASQDKKS---LDVGA----NLFIGNLDPDVDEKLLYDTFSAFGV 137
+N + L GK + V + ++ LD+G N+++ NL + D++ L + F +G
Sbjct: 156 KVNGMLLNGKKVFVGRFMSRRERLEVLDLGMRKFNNVYVKNLSEETDDEKLREIFELYGK 215
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
I++ K+M D + S+ FGF+S+++ EA+ A+EA+NG + + Y + TK E
Sbjct: 216 IIS-AKVMIDDSSRKSKQFGFVSFENPEAAKKAVEALNGN---DNAGKILYVGRAQTKIE 271
Query: 198 RHGTPAERI 206
R E+
Sbjct: 272 RQAELKEKF 280
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 20/186 (10%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
YV NL + +E L E+F G +++ V D + + +GFV F + E A A++ L
Sbjct: 192 VYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFENPEAAKKAVEAL 251
Query: 87 NMIKLYGKPIRVNKA-------SQDKKSLDV----------GANLFIGNLDPDVDEKLLY 129
N GK + V +A ++ K+ + G NLF+ NLD ++D+K L
Sbjct: 252 NGNDNAGKILYVGRAQTKIERQAELKEKFERIRKERINRYQGVNLFVKNLDDNIDDKRLR 311
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
F+ FG I T+ K+M + G S+GFGF+ + S E + AI MN + + R + V+ A
Sbjct: 312 KEFAQFGTI-TSAKVM--TENGRSKGFGFVYFSSPEEATKAIVEMNEKIIEARPLYVALA 368
Query: 190 YKKDTK 195
+K+ +
Sbjct: 369 QRKEDR 374
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 21 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
R Q +V NLD + ++ L + F Q G + + V + +G+GFV F S E+A
Sbjct: 290 RYQGVNLFVKNLDDNIDDKRLRKEFAQFGTITSAKVMTE--NGRSKGFGFVYFSSPEEAT 347
Query: 81 YAIKVLNMIKLYGKPIRVNKA--SQDKKS 107
AI +N + +P+ V A +D+K+
Sbjct: 348 KAIVEMNEKIIEARPLYVALAQRKEDRKA 376
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 3/173 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E+F G V+++ V +D VT GY +V + + DA+ A+
Sbjct: 16 ASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+F+ NLD +D K L+DTFS FG I++ K
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGNILS-CK 134
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 196
+ D + G S+ +GF+ Y+ E++ AIE +NG L ++ + V + KK +
Sbjct: 135 VATD-EFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERA 186
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D + YGFV + EE A AI+ +N
Sbjct: 107 FVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGK-SKNYGFVHYEDEESAKEAIEKVN 165
Query: 88 MIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
++L K + V +A+ D K NL++ N V E L FS +G I +
Sbjct: 166 GMQLGSKNVYVGHFIKKSERATNDTKF----TNLYVKNFPDTVTEAHLKQLFSPYGEITS 221
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG 200
++ D N R F FI+Y +++ A+E +NG+ + + Y Y D K E
Sbjct: 222 ---MIVKSDNKN-RKFCFINYSDADSARNAMENLNGKKIT-EDGKIDYNY--DPKKEETE 274
Query: 201 TPA 203
PA
Sbjct: 275 KPA 277
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G NL+I NLD ++++ L + F +G I T+ K+M+D D S+GFGF+ + + E ++ A
Sbjct: 409 GVNLYIKNLDDSMNDQTLKELFEPYGTI-TSAKVMKD-DKDQSKGFGFVCFGTHEEANKA 466
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ M+ + + + + V A K++ + R
Sbjct: 467 VTEMHLKIINGKPLYVGLAEKREQRLSR 494
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NLD + ++ L ELF G + + V KD + +G+GFV F + E+A+ A+ ++
Sbjct: 413 YIKNLDDSMNDQTLKELFEPYGTITSAKVMKDD-KDQSKGFGFVCFGTHEEANKAVTEMH 471
Query: 88 MIKLYGKPIRVNKASQDKKSL 108
+ + GKP+ V A + ++ L
Sbjct: 472 LKIINGKPLYVGLAEKREQRL 492
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE+LL+ F GPV+++ + +D+VT GY +V F DA A+
Sbjct: 68 ASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALD 127
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GK IR+ + +D G N+FI NLD +D K LY+ FSAFG I++ K
Sbjct: 128 TMNFDMIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILS-SK 186
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGERHGTP 202
+M D D G S+G+ F+ + + A+D AIE MNG+ L ++ V + +KD + E
Sbjct: 187 VMSD-DQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKA 244
Query: 203 AE 204
+E
Sbjct: 245 SE 246
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L+E F G +++ V D + +GY FV F+++ AD AI+ +
Sbjct: 158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEEM 215
Query: 87 NMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N L G + R ++ ++ + N++I N D+D++ L D FS +G +
Sbjct: 216 NGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTL 275
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D +G S+GFGF+S+DS EA+ A+E MNG+ + + I V A KK
Sbjct: 276 S-VKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKK 326
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ++F + G ++V V D + +G+GFV F S E A A++ +N
Sbjct: 251 YIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMN 309
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+ G+ I V +A + K+ + G L+I NLD +D++ L +
Sbjct: 310 GRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRN 369
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS+FG I + K+M++ G S+GFG I + S E + A+ MNG+ L ++ ++++ A
Sbjct: 370 EFSSFGSI-SRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALA 425
>gi|308804421|ref|XP_003079523.1| Splicing factor 3b, subunit 4 (ISS) [Ostreococcus tauri]
gi|116057978|emb|CAL54181.1| Splicing factor 3b, subunit 4 (ISS) [Ostreococcus tauri]
Length = 201
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 59/67 (88%)
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
T P IMRDPDTG S+GFGF++YDSF+ASDAAI+AM+GQYLCN+QI V YA+KKD+KGE
Sbjct: 4 CCTTPSIMRDPDTGVSKGFGFVAYDSFDASDAAIDAMDGQYLCNKQINVQYAFKKDSKGE 63
Query: 198 RHGTPAE 204
RHG+ AE
Sbjct: 64 RHGSQAE 70
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 114/199 (57%), Gaps = 8/199 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ PQV+E LL ELF AG + + + ++ YGFV++ A AI
Sbjct: 47 SVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIVT 102
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGAN--LFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN ++G+ I+VN A + D + +F+G+L P+V + LY FSA+ ++ +
Sbjct: 103 LNGRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSS-CSDAR 161
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK-KDTKGERHGTP 202
+M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K + GE +
Sbjct: 162 VMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSE 221
Query: 203 AERILAANNPSSQKSRPHT 221
++ ++ + +S++++ T
Sbjct: 222 SKSVVELTSGTSEEAQEMT 240
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 52/228 (22%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G N+ GQ ++ + +D + +VG+L P+VT+ L+ F + V
Sbjct: 105 GRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMW 164
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN------------KASQDKK 106
D+ T +G+GFV FR++++A AI L L + IR N ++S+ K
Sbjct: 165 DQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKS 224
Query: 107 SLDVGA----------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++ + +++GNL P+V L+ F A GV + + +
Sbjct: 225 VVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGTIEDVR 284
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
+ RD +GFGF+ Y + + AI+ N ++L + I S+ K
Sbjct: 285 VQRD------KGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKCSWGSK 326
>gi|157823445|ref|NP_001099899.1| polyadenylate-binding protein 4-like [Rattus norvegicus]
gi|149027259|gb|EDL82942.1| rCG37805 [Rattus norvegicus]
Length = 370
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE+LL+ F GPV+++ + +D +++ GYG+V F DA A++
Sbjct: 10 ASLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQVGDAQKALE 69
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GK IR+ + +D G N+FI NLD +D K LY+ FS FG I++ K
Sbjct: 70 TMNFDLIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFGKIMS-SK 128
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTP 202
+M D + S+G+GF+ Y A+D AIE MNG+ L + + V+ + +KD + E P
Sbjct: 129 VMTDEE--GSKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREAELREKP 186
Query: 203 AE 204
AE
Sbjct: 187 AE 188
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 21/178 (11%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L+E F G +++ V D + +GYGFV ++ + AD AI+ +
Sbjct: 100 VFIKNLDKSIDNKTLYEHFSPFGKIMSSKVMTDEEGS--KGYGFVHYQDQRAADRAIEEM 157
Query: 87 NMIKLYGKPIRVN-------KASQDKKSL-----DVGANLFIGNLDPDVDEKLLYDTFSA 134
N GK +R + K+ +D+++ N++I N D+D++ L FS
Sbjct: 158 N-----GKLLRDSTLFVARFKSRKDREAELREKPAEFTNVYIKNFGDDMDDESLRSVFSK 212
Query: 135 FGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+G ++ K+M+D +G S+ FGF+S+DS +A+ A+E MNG+ + + I V A KK
Sbjct: 213 YGQTLS-VKVMKDA-SGKSKRFGFVSFDSHKAAKNAVEDMNGRDINGQTIFVGRAQKK 268
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
Y+ N + +E L +F + G ++V V KD + + +GFV F S + A A++ +
Sbjct: 192 VYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKD-ASGKSKRFGFVSFDSHKAAKNAVEDM 250
Query: 87 NMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLY 129
N + G+ I V +A +++ A L+I NLD +D++ L
Sbjct: 251 NGRDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETLR 310
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDS 163
FS FG I K+M++ G S+GFG I + S
Sbjct: 311 KEFSVFGSI-CRVKVMQEA--GQSKGFGLICFFS 341
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 100/162 (61%), Gaps = 9/162 (5%)
Query: 40 LLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN 99
+L+E F AGPV+++ V +D +T GY +V F+ DA+ A+ +N + GKPIR+
Sbjct: 1 MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIM 60
Query: 100 KASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGF 156
+ +D +KS VG N+FI NLD +D K LYDTFSAFG I++ + D S+G+
Sbjct: 61 WSQRDPSLRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC---DENGSKGY 115
Query: 157 GFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 197
F+ +++ EA+D AIE MNG L +R++ V + +K+ + E
Sbjct: 116 AFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAE 157
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 101/172 (58%), Gaps = 11/172 (6%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + + L++ F G +++ V D N +GY FV F ++E AD AI+ +N
Sbjct: 77 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMN 134
Query: 88 MIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L + + V + S+ ++ ++GA N++I N +VD++ L + FS FG ++
Sbjct: 135 GMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLS 194
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
K+MRDP +G S+GFGF+SY+ E ++ A+E MNG+ + + I V A KK
Sbjct: 195 -VKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 244
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%)
Query: 19 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED 78
A+ + Y+ N +V +E L ELF Q G ++V V +D + +G+GFV + ED
Sbjct: 160 AKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHED 218
Query: 79 ADYAIKVLNMIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDP 121
A+ A++ +N ++ GK I V +A Q++ S G NL+I NLD
Sbjct: 219 ANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 278
Query: 122 DVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN 181
+D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + +
Sbjct: 279 TIDDEKLRKEFSPFGSI-TSAKVM--LEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS 335
Query: 182 RQITVSYAYKKDTK 195
+ + V+ A +K+ +
Sbjct: 336 KPLYVALAQRKEER 349
>gi|7522539|pir||T38618 probable splicosome associated RNA binding protein - fission yeast
(Schizosaccharomyces pombe) (fragment)
Length = 229
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/81 (64%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Query: 120 DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL 179
DP VDE++LYDTFSA G +V P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L
Sbjct: 1 DPLVDERVLYDTFSALGQLVKAPQVARD-ENGRSKGYGFVSYDSFETADAAIEAMNNQFL 59
Query: 180 CNRQITVSYAYKKDTKGERHG 200
N+ ITVSYA+K++ KGERHG
Sbjct: 60 MNKPITVSYAFKREGKGERHG 80
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 33 DPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKL 91
DP V E +L++ F G +V V +D +GYGFV + S E AD AI+ +N L
Sbjct: 1 DPLVDERVLYDTFSALGQLVKAPQVARDE-NGRSKGYGFVSYDSFETADAAIEAMNNQFL 59
Query: 92 YGKPIRVNKA 101
KPI V+ A
Sbjct: 60 MNKPITVSYA 69
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 9/228 (3%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N A+ YVG+L+P V+E L+++F G V ++ V +D +T GY +V F E
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K LYDTFS FG I++
Sbjct: 95 AIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILS 154
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERH 199
+ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+ + +K+ +
Sbjct: 155 S-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 200 GTPAERI-LAANNPSSQKSRP--HTLFASGPPSLQNAPQ--ANGTVGG 242
T A L N +S+ + LFA P + + + A+G + G
Sbjct: 213 ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKG 260
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 23/206 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ + T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN
Sbjct: 222 YVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALN 280
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A + + + V G NLF+ NLD VD++ L +
Sbjct: 281 DSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEE 340
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A
Sbjct: 341 EFAPYGTI-TSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 191 KKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 399 RKDV---RRSQLAQQIQARNQMRYQQ 421
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL P + + L++ F G +++ + D +G+GFV F E A AI LN
Sbjct: 129 FIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALN 187
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+
Sbjct: 188 GMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ +
Sbjct: 248 -ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 114/199 (57%), Gaps = 8/199 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ PQV+E LL ELF AG + + + ++ YGFV++ A AI
Sbjct: 47 SVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSAAIAIVT 102
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGAN--LFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN ++G+ I+VN A + D + +F+G+L P+V + LY FSA+ ++ +
Sbjct: 103 LNGRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSS-CSDAR 161
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK-KDTKGERHGTP 202
+M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K + GE +
Sbjct: 162 VMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSE 221
Query: 203 AERILAANNPSSQKSRPHT 221
++ ++ + +S++++ T
Sbjct: 222 SKSVVELTSGTSEEAQEMT 240
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 52/229 (22%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G N+ GQ ++ + +D + +VG+L P+VT+ L+ F + V
Sbjct: 105 GRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMW 164
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN------------KASQDKK 106
D+ T +G+GFV FR++++A AI L L + IR N ++S+ K
Sbjct: 165 DQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKS 224
Query: 107 SLDVGA----------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++ + +++GNL P+V L+ F A GV + + +
Sbjct: 225 VVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGTIEDVR 284
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ RD +GFGF+ Y + + AI+ N ++L + I + KK
Sbjct: 285 VQRD------KGFGFVRYSTHGEAALAIQMGNTRFLFGKPIKMHITRKK 327
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N A+ YVG+L+P V+E L+++F G V ++ V +D +T GY +V F E
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K LYDTFS FG I++
Sbjct: 95 AIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILS 154
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 187
+ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+
Sbjct: 155 S-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVA 199
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 23/206 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ + T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN
Sbjct: 222 YVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALN 280
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A + + + V G NLF+ NLD VD++ L +
Sbjct: 281 DSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEE 340
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A
Sbjct: 341 EFAPYGTI-TSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 191 KKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 399 RKDV---RRSQLAQQIQARNQMRYQQ 421
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL P + + L++ F G +++ + D +G+GFV F E A AI LN
Sbjct: 129 FIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALN 187
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+
Sbjct: 188 GMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ +
Sbjct: 248 -ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+++ YVG+L P+V++ L F + GPV++ V +D T GYG+V F + A+ A+
Sbjct: 12 NSSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQAL 71
Query: 84 KVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+VLN L G+PIR+ + +D G N+FI NLD +++K LYDTFS FG I++
Sbjct: 72 EVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILS-C 130
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
KI+ D + G S+G+GF+ ++ E ++ AIE +N + +R + V
Sbjct: 131 KIVMD-ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYV 173
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD + ++ L++ F G +++ + D +GYGFV F EE A+ AI+ +N
Sbjct: 104 FIKNLDKSIEQKELYDTFSFFGRILSCKIVMDE-NGQSKGYGFVHFEKEECAERAIEKIN 162
Query: 88 MIKLYGKPIRVNKA--SQDKKSLDVGA---NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+ + + + V K ++KS NL++ N P+ D + L + FS FG I +
Sbjct: 163 NMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYVKNFPPETDNEKLKEMFSEFGEI-KSA 221
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTP 202
+M+D + G S+GFGF+ Y + ++ A+ M+G+ + R + + A +K+ + E
Sbjct: 222 CVMKD-NEGKSKGFGFVCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQK 280
Query: 203 AER 205
E+
Sbjct: 281 IEK 283
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 168/400 (42%), Gaps = 84/400 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N P+ E L E+F + G + + V KD +G+GFV + + A+ A++ ++
Sbjct: 195 YVKNFPPETDNEKLKEMFSEFGEIKSACVMKDN-EGKSKGFGFVCYLDPDHAENAVRTMH 253
Query: 88 MIKLYGKPIRVNKASQDKKSLD------------------VGANLFIGNLDPDVDEKLLY 129
++ G+ + +A + ++ + + NL++ NLD ++D+K L
Sbjct: 254 GKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSNYMLNVNLYVKNLDDNIDDKRLE 313
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ FS G I T+ K+M+D + S+GFGF+ + + E + A+ MNG + ++ + V+ A
Sbjct: 314 EAFSVHGSI-TSAKVMKDANN-RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALA 371
Query: 190 YKK-DTKGERHGTPAERILAANNPSSQ-------KSRPHTLFASGPPSLQ---------- 231
+K D + + +R+ P + + PH F PP+ Q
Sbjct: 372 QRKEDRRAKLIEEHQQRLAQYRAPVASMIPAVPGHAAPHNYF---PPAFQAQRFYHPSSA 428
Query: 232 ---NAPQANGTVG-----GPVPPRPYANGAASGPISAVRPPPPPPQAAAFPPMQVAGQAA 283
+ P+ N G G +P RP P++ P P P AA Q+A A
Sbjct: 429 VLSSQPRWNRAAGIPAQIGAIPNRP--------PVAGYYPGAPNP--AAITANQMAAFAQ 478
Query: 284 WQGQPQHIGQGVPQPVMPPPMQFRPPPNMPPPPPPQLASAMQRPPPQ------------P 331
+ P GV +P+MP M +MP P Q A+ + Q P
Sbjct: 479 LR-TP-----GVNRPMMPNGM-----SSMPTTPHLQTAAVFNQAANQQRQATGRQGVVVP 527
Query: 332 MGMGAQPPVWRQPPPPPQQLLGRPPMPHMSMPPPPPPQAP 371
+GA Q P + G PP + +M P Q P
Sbjct: 528 QVLGATTGGLNQRPTAASVVAG-PPSANPTMRPQVASQVP 566
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 8/196 (4%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ YVGN+ QVTE LL E+F GPV + + ++ YGFV + A AI
Sbjct: 26 SVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSS----YGFVHYFDRRSAALAILS 81
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN L+G+PI+VN A + D N+F+G+L P+V + +L+ FSA+ ++ +
Sbjct: 82 LNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSS-CSDAR 140
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE-RHGTP 202
+M D TG SRGFGF+S+ + + + AI + G++L +RQI ++A K E + G+
Sbjct: 141 VMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSD 200
Query: 203 AERILAANNPSSQKSR 218
+ ++ +N SS+ +
Sbjct: 201 TKSVVELSNGSSEDGK 216
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 53/229 (23%)
Query: 10 GANLLGQ-------HSAERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPK 58
G +L GQ +++ + +D + +VG+L P+VT+ +L+ F + V
Sbjct: 84 GRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMW 143
Query: 59 DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS------QDKKSLDVGA 112
D+ T +G+GFV FR++++A AI L L + IR N A+ +DK+ D +
Sbjct: 144 DQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKS 203
Query: 113 ----------------------------NLFIGNLDPDVDEKLLYDTFSAFGV-IVTNPK 143
+++GNL P+V + L+ F + G ++ +
Sbjct: 204 VVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVR 263
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQ-YLCNRQITVSYAYK 191
I RD +GFGF+ Y++ + AI+ N + +LC RQI S+ K
Sbjct: 264 IQRD------KGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSK 306
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 9/228 (3%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N A+ YVG+L+P V+E L+++F G V ++ V +D +T GY +V F E
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K LYDTFS FG I++
Sbjct: 95 AIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILS 154
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERH 199
+ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+ + +K+ +
Sbjct: 155 S-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 200 GTPAERI-LAANNPSSQKSRP--HTLFASGPPSLQNAPQ--ANGTVGG 242
T A L N +S+ + LFA P + + + A+G + G
Sbjct: 213 ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKG 260
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 23/206 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ + T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN
Sbjct: 222 YVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALN 280
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A + + + V G NLF+ NLD VD++ L +
Sbjct: 281 DSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEE 340
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A
Sbjct: 341 EFAPYGTI-TSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 191 KKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 399 RKDV---RRSQLAQQIQARNQMRYQQ 421
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL P + + L++ F G +++ + D +G+GFV F E A AI LN
Sbjct: 129 FIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALN 187
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+
Sbjct: 188 GMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ +
Sbjct: 248 -ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 9/228 (3%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N A+ YVG+L+P V+E L+++F G V ++ V +D +T GY +V F E
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K LYDTFS FG I++
Sbjct: 95 AIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILS 154
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERH 199
+ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+ + +K+ +
Sbjct: 155 S-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 200 GTPAERI-LAANNPSSQKSRP--HTLFASGPPSLQNAPQ--ANGTVGG 242
T A L N +S+ + LFA P + + + A+G + G
Sbjct: 213 ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKG 260
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 23/206 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ + T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN
Sbjct: 222 YVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALN 280
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A + + + V G NLF+ NLD VD++ L +
Sbjct: 281 DSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEE 340
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A
Sbjct: 341 EFAPYGTI-TSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 191 KKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 399 RKDV---RRSQLAQQIQARNQMRYQQ 421
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL P + + L++ F G +++ + D +G+GFV F E A AI LN
Sbjct: 129 FIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALN 187
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+
Sbjct: 188 GMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ +
Sbjct: 248 -ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 125/228 (54%), Gaps = 9/228 (3%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N A+ YVG+L+P V+E L+++F G V ++ V +D +T GY +V F E
Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K LYDTFS FG I++
Sbjct: 95 AIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILS 154
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERH 199
+ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+ + +K+ +
Sbjct: 155 S-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 212
Query: 200 GTPAERI-LAANNPSSQKSRP--HTLFASGPPSLQNAPQ--ANGTVGG 242
T A L N +S+ + LFA P + + + A+G + G
Sbjct: 213 ETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKG 260
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 23/206 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N++ + T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN
Sbjct: 222 YVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALN 280
Query: 88 MIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYD 130
+L G+ + V +A + + + V G NLF+ NLD VD++ L +
Sbjct: 281 DSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEE 340
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A
Sbjct: 341 EFAPYGTI-TSAKVMR-TENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 191 KKDTKGERHGTPAERILAANNPSSQK 216
+KD R A++I A N Q+
Sbjct: 399 RKDV---RRSQLAQQIQARNQMRYQQ 421
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL P + + L++ F G +++ + D +G+GFV F E A AI LN
Sbjct: 129 FIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALN 187
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
+ L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+
Sbjct: 188 GMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS 247
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ +
Sbjct: 248 -ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 130/248 (52%), Gaps = 21/248 (8%)
Query: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
+ +VGN+ PQVTE LL E+F G V + + ++ YGF+ + A AI
Sbjct: 55 SVFVGNIHPQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAALAIVS 110
Query: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAF-GVIVTNP 142
LN L+G+PI+VN A + D + N+F+G+L P+V + +L+ FS + G ++
Sbjct: 111 LNGRHLFGQPIKVNWAFASGQREDTSSHFNIFVGDLSPEVTDAMLFACFSVYPGC--SDA 168
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK-KDTKGERHGT 201
++M D TG SRGFGF+S+ + + + +AI + G++L +RQI ++A K ++ ++ +
Sbjct: 169 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGANSNDDKQSS 228
Query: 202 PAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP-------RPYANGAA 254
A+ ++ N SS+ + A+ + +N PQ G + P Y +
Sbjct: 229 DAKSVVELTNGSSEDGKE----AANSDAPENNPQYTTVYVGNIAPEVTQLDLHRYFHALG 284
Query: 255 SGPISAVR 262
+G I +R
Sbjct: 285 AGVIEEIR 292
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+VG+L P+VT+ +L+ F + V D+ T +G+GFV FR+++DA AI L
Sbjct: 142 FVGDLSPEVTDAMLFACFSVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 201
Query: 88 MIKLYGKPIRVNKASQ------DKKSLDVGA----------------------------N 113
L + IR N A++ DK+S D +
Sbjct: 202 GKWLGSRQIRCNWATKGANSNDDKQSSDAKSVVELTNGSSEDGKEAANSDAPENNPQYTT 261
Query: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
+++GN+ P+V + L+ F A G ++ +I RD +GFGF+ Y++ + AI+
Sbjct: 262 VYVGNIAPEVTQLDLHRYFHALGAGVIEEIRIQRD------KGFGFVRYNTHAEAALAIQ 315
Query: 173 AMNGQ-YLCNRQITVSYAYK 191
N L RQI S+ K
Sbjct: 316 MGNTHSVLGGRQIKCSWGNK 335
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Q T YVGN+ P+VT+ L F + AG + + + +D+ G+GFV + + +A
Sbjct: 258 QYTTVYVGNIAPEVTQLDLHRYFHALGAGVIEEIRIQRDK------GFGFVRYNTHAEAA 311
Query: 81 YAIKVLNMIKLYG 93
AI++ N + G
Sbjct: 312 LAIQMGNTHSVLG 324
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 7/169 (4%)
Query: 22 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 81
N +A+ YVG LDP +TE LL+++F GP+ ++ V +D VT GY +V + E
Sbjct: 47 NNNASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKK 106
Query: 82 AIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
AI+ LN ++ G+P R+ + +D G+ N+FI NL P +D K L++TFS FG +++
Sbjct: 107 AIQELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLS 166
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDA--AIEAMNGQYLCNRQITVS 187
K+ D + GNSRGFGF+ + E SDA AIEA+NG + ++ V+
Sbjct: 167 -CKVALD-ENGNSRGFGFVHFK--EESDAKDAIEAVNGMLMNGLEVYVA 211
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 23/200 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N+D + T+E +LF Q G +V+ + KD +G+GFV F A A++ LN
Sbjct: 234 YVKNIDVETTDEEFEQLFSQYGEIVSAALEKD-AEGKPKGFGFVNFVDHNAAAKAVEELN 292
Query: 88 MIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ + + V +A + +K + G NLFI NLD +D++ L +
Sbjct: 293 GKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKE 352
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
F+ +G I T+ ++MRD + GNS+GFGF+ + S E + A+ N Q + + + V+ A
Sbjct: 353 EFAPYGTI-TSARVMRDQE-GNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQ 410
Query: 191 KKDTKGERHGTPAERILAAN 210
+KD R A++I A N
Sbjct: 411 RKDV---RRSQLAQQIQARN 427
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 16/180 (8%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NL P + + L E F G V++ V D N +G+GFV F+ E DA AI+ +N
Sbjct: 141 FIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGN-SRGFGFVHFKEESDAKDAIEAVN 199
Query: 88 MIKLYG----------KPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGV 137
+ + G K R++K + K + N+++ N+D + ++ FS +G
Sbjct: 200 GMLMNGLEVYVAMHVPKKDRISKLEEAKANF---TNIYVKNIDVETTDEEFEQLFSQYGE 256
Query: 138 IVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 197
IV+ + +D + G +GFGF+++ A+ A+E +NG+ ++ + V A KK + E
Sbjct: 257 IVS-AALEKDAE-GKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAE 314
>gi|402870468|ref|XP_003899242.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Papio anubis]
Length = 496
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE+LL+ F AGPV+++ + +D+VT GY +V F DA A+
Sbjct: 136 ASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKALD 195
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GK IR+ + +D G N+FI NLD +D K LY+ FS FG I++ K
Sbjct: 196 TMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGFGKILS-SK 254
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGERHGTP 202
+M D D G S+G+ F+ + + A+D AIE MNG+ L + ++ V + +KD + E
Sbjct: 255 VMSD-DQG-SKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVGRFKNRKDREAELRSKA 312
Query: 203 AE 204
+E
Sbjct: 313 SE 314
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 92/173 (53%), Gaps = 11/173 (6%)
Query: 27 AYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL 86
++ NLD + + L+E F G +++ V D +GY FV F+++ AD AI+ +
Sbjct: 226 VFIKNLDKSIDNKTLYEHFSGFGKILSSKVMSD--DQGSKGYAFVHFQNQSAADRAIEEM 283
Query: 87 NMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
N L + R ++ ++ + N++I N D+D++ L D FS +G +
Sbjct: 284 NGRLLKSCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTL 343
Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ K+M D G S+GFGF+S+DS EA+ A+E MNG+ + + I V A KK
Sbjct: 344 S-VKVMTDS-RGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKK 394
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ N + +E L ++F + G ++V V D +G+GFV F S E A A++ +N
Sbjct: 319 YIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-RGKSKGFGFVSFDSHEAAKKAVEEMN 377
Query: 88 MIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYD 130
+ G+ I V +A + K+ + G L++ NLD +D++ L +
Sbjct: 378 GRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKNLDDTIDDEKLRN 437
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS+FG I+ K+M+ G S+GFGFI + S E + A+ MNG++L ++ I+++ A
Sbjct: 438 EFSSFGSII-RVKVMQQE--GQSKGFGFICFSSLEDATKAMIEMNGRFLGSKPISIALA 493
>gi|405963265|gb|EKC28854.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 172
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 102/163 (62%), Gaps = 8/163 (4%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
+ YVG+L P VTE++L+E F AGPV+++ V + T GY +V+F+ EDA+ A+
Sbjct: 15 TSLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAYVDFKHLEDAETALN 74
Query: 85 VLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+N + G+PIR+ +D +KS VG N+FI NLD +D K LYDTFSAFG I++
Sbjct: 75 TMNYDTIKGQPIRITWYQRDPSPRKS-GVG-NVFIKNLDKSIDNKALYDTFSAFGNILS- 131
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQI 184
KI+ D RG+GF+ ++ E++ AIE +NG L +++
Sbjct: 132 CKIV--CDEHGFRGYGFVHFEKEESATIAIERVNGTMLHGKKV 172
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
+L++G+L PDV E +LY+ FS G +++ ++ R T S G+ ++ + E ++ A+
Sbjct: 15 TSLYVGDLHPDVTEDMLYEKFSTAGPVLS-IRVCRVLFTRRSLGYAYVDFKHLEDAETAL 73
Query: 172 EAMNGQYLCNRQITVSYAYKKD 193
MN + + I +++ Y++D
Sbjct: 74 NTMNYDTIKGQPIRITW-YQRD 94
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 5/182 (2%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L TE+LL+ F AGPV+++ + +D T GY +V F DA A+
Sbjct: 122 ASLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKALD 181
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+N + GKPIR+ + +D G N+ I NLD VD K LY+ FS FG I+++ K
Sbjct: 182 TMNFDAVEGKPIRLMWSQRDACLRKSGVGNVIIKNLDRSVDNKTLYEHFSGFGRILSS-K 240
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTP 202
+M D D G S+G+ F+ + S A+D AI+ MNG+ + +RQ+ V+ + ++D + E
Sbjct: 241 VMSD-DQG-SKGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLVAPFRSRRDREAELRTRT 298
Query: 203 AE 204
+E
Sbjct: 299 SE 300
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 29 VGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNM 88
+ NLD V + L+E F G +++ V D +GY FV F+S+ AD AI+ +N
Sbjct: 214 IKNLDRSVDNKTLYEHFSGFGRILSSKVMSD--DQGSKGYAFVHFQSQSAADCAIQEMNG 271
Query: 89 IKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTN 141
+ + + R ++ ++ + N+++ N D+D++ L FS +G ++
Sbjct: 272 KVIRDRQVLVAPFRSRRDREAELRTRTSEFTNVYVKNFGEDMDDERLQGVFSKYGRTLS- 330
Query: 142 PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
K+M D +G S+GFGF+S+DS EA+ A+E MNG+ + + + V A KK+ +
Sbjct: 331 VKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLVFVGRAQKKEER 383
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N + +E L +F + G ++V V D + +G+GFV F S E A A++ +N
Sbjct: 305 YVKNFGEDMDDERLQGVFSKYGRTLSVKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMN 363
Query: 88 MIKLYGKPIRVNKA-----------------SQDKKSLDVGANLFIGNLDPDVDEKLLYD 130
+ G+ + V +A +D G L+I NLD VD+ L
Sbjct: 364 GKDINGQLVFVGRAQKKEERQAELKQVFEELKRDGARRCQGVKLYIKNLDDTVDDDRLRR 423
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY 190
FS+FG I + K+M + G +GFG + + S E + A+ MNG+ L ++ + ++ A
Sbjct: 424 AFSSFGSI-SRVKVM--EEEGQRKGFGLVCFSSPEEAAKAMTQMNGRVLGSKPLNIALAK 480
Query: 191 KK 192
++
Sbjct: 481 RQ 482
>gi|365986549|ref|XP_003670106.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
gi|343768876|emb|CCD24863.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
Length = 258
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 115/202 (56%), Gaps = 20/202 (9%)
Query: 24 DATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAI 83
+ + YVGN+DP VT+ L+ELFVQ P+ + PKD++ HQGY F+EF + ED +Y +
Sbjct: 48 ELSVYVGNIDPNVTKAQLYELFVQVSPISKIAYPKDKLLQTHQGYAFIEFYTPEDTNYVV 107
Query: 84 KVL-NMIKLYGKPIRVNKASQD-----------KKSLDVG--ANLFIGNLDPDVDEKLLY 129
KV+ N + LY + ++V K+ Q+ K ++V A +F+ NLD VD + L
Sbjct: 108 KVMNNTVSLYDRFLKVRKSVQNLPSSNNKTYTTSKQVEVLPIAKVFVKNLDESVDIQQLS 167
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
+ F FG + P+I + N+ I + + SDAAI ++ + + N++I + YA
Sbjct: 168 NIFEKFGPLFKEPEIFY--LSNNTLRCAHIFFKFYPDSDAAIGKLDNELIANKRINLDYA 225
Query: 190 YKK-DTKGE---RHGTPAERIL 207
YK+ T G+ ++G+ +R+L
Sbjct: 226 YKEGHTIGKGNNKYGSETDRLL 247
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 103/164 (62%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L + E L+E F AGPV+++ V +D +T GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + KPIR+ + +D + VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDLIRNKPIRIMWSQRDPSLRRSGVG-NVFIKNLDKGIDNKAIYDTFSAFGNILS-C 119
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D + GNS+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 120 KVAID-EKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVYV 162
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V D N +GYGFV F +EE
Sbjct: 83 SLRRSGVGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVAIDEKGN-SKGYGFVHFETEE 141
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYD 130
A+ +I +N + L GK + V K + +K L A LF + N D D++ L +
Sbjct: 142 AANTSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKE 201
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC-NRQITVSYA 189
F +G I T+ K+M D G S+GFGF++Y++ EA++AA++A+NG+ + ++ + V+ A
Sbjct: 202 FFEPYGKI-TSYKVMSKED-GKSKGFGFVAYETTEAAEAAVQALNGKDMGESKSLYVARA 259
Query: 190 YKK 192
KK
Sbjct: 260 QKK 262
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N +E L E F G + + Y + +G+GFV + + E A+ A++ LN
Sbjct: 186 YVKNFTEDFDDEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAYETTEAAEAAVQALN 244
Query: 88 MIKL-YGKPIRVNKASQD---------------KKSLD--VGANLFIGNLDPDVDEKLLY 129
+ K + V +A + KK D G NL++ NLD +D++ L
Sbjct: 245 GKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLDDTIDDERLR 304
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M D + G S+GFGF+ + S + A+ +NG+ + ++ + V+ A
Sbjct: 305 KDFSMYGTI-TSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 190 YKKDTK 195
+K+ +
Sbjct: 363 QRKEER 368
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 5/164 (3%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L + E L+E F AGPV+++ V +D VT GY +V F+ DA+ A+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD 61
Query: 85 VLNMIKLYGKPIRVNKASQD--KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
+N + KPIR+ + +D + VG N+FI NLD +D K +YDTFSAFG I++
Sbjct: 62 TMNFDLIRDKPIRIMWSQRDPSLRRSGVG-NVFIKNLDKAIDNKAIYDTFSAFGNILS-C 119
Query: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
K+ D + G S+G+GF+ +++ EA++ +I+ +NG L +++ V
Sbjct: 120 KVATD-EKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 102/183 (55%), Gaps = 11/183 (6%)
Query: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
S R+ ++ NLD + + +++ F G +++ V D +GYGFV F +EE
Sbjct: 83 SLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDE-KGTSKGYGFVHFETEE 141
Query: 78 DADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYD 130
A+ +I +N + L GK + V K + +K L A LF + N D D++ L +
Sbjct: 142 AANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKE 201
Query: 131 TFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN-RQITVSYA 189
F +G I T+ K+M D G S+GFGF++Y++ EA++AA++A+NG+ + + + + V+ A
Sbjct: 202 FFEPYGKI-TSYKVMSKED-GKSKGFGFVAYETTEAAEAAVQALNGKDMGDGKTLYVARA 259
Query: 190 YKK 192
KK
Sbjct: 260 QKK 262
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 21/186 (11%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
YV N +E L E F G + + Y + +G+GFV + + E A+ A++ LN
Sbjct: 186 YVKNFTEDFDDEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAYETTEAAEAAVQALN 244
Query: 88 MIKL-YGKPIRVNKASQD-------KKSLD----------VGANLFIGNLDPDVDEKLLY 129
+ GK + V +A + K+ + G NL++ NLD +D++ L
Sbjct: 245 GKDMGDGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERLR 304
Query: 130 DTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYA 189
FS +G I T+ K+M D + G S+GFGF+ + S + A+ +NG+ + ++ + V+ A
Sbjct: 305 KEFSLYGTI-TSAKVMTDEE-GRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALA 362
Query: 190 YKKDTK 195
+K+ +
Sbjct: 363 QRKEER 368
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 106/170 (62%), Gaps = 10/170 (5%)
Query: 23 QDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEED---A 79
+++ YVG+LD VTE L+E+F Q GPV ++ V +D VT GY +V + S D A
Sbjct: 36 HNSSLYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAA 95
Query: 80 DYAIKVLNMIKLYGKPIRVNKASQD---KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFG 136
+ A+ LN L G+P+R+ + +D +KS VG N+FI NLD VD K L+DTFSAFG
Sbjct: 96 ERALDQLNYTPLVGRPMRIMWSHRDPAFRKS-GVG-NIFIKNLDRSVDNKALHDTFSAFG 153
Query: 137 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 186
I++ K+ +D G S+G+GF+ ++ E++ AIE +NG L +++ V
Sbjct: 154 NILS-CKVAQDL-KGESKGYGFVHFEKDESARLAIEKVNGMLLEGKKVYV 201
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 25/199 (12%)
Query: 19 AERNQDA-----TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
+ER+ D+ +V NLD V+++ + +F + G V + + +D +G+GF+ F
Sbjct: 208 SERSSDSEVKFTNVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMRDD-EGKSKGFGFINF 266
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKAS-------------QDKKSLDV----GANLFI 116
E A A++ LN + K + V +A ++ +S + G NL++
Sbjct: 267 EEPEQAASAVQALNGKDVNCKELYVGRAQKKAEREAMLRAKFEELRSERIAKYQGMNLYV 326
Query: 117 GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 176
NL D+D++ L FS FG I T+ K+M D G SRGFGF+ Y S E + A+ MNG
Sbjct: 327 KNLHDDIDDETLRTEFSQFGTI-TSAKVMVDS-AGKSRGFGFVCYASPEEATRAVTEMNG 384
Query: 177 QYLCNRQITVSYAYKKDTK 195
+ + + I V+ A ++D +
Sbjct: 385 RMIKGKPIYVALAQRRDVR 403
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 93/169 (55%), Gaps = 7/169 (4%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
++ NLD V + L + F G +++ V +D + +GYGFV F +E A AI+ +N
Sbjct: 132 FIKNLDRSVDNKALHDTFSAFGNILSCKVAQD-LKGESKGYGFVHFEKDESARLAIEKVN 190
Query: 88 MIKLYGKPIRV----NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
+ L GK + V ++ + S N+F+ NLD V + + F+ G V +
Sbjct: 191 GMLLEGKKVYVGPFLRRSERSSDSEVKFTNVFVKNLDEAVSDDEVKAMFAEHGT-VNSCI 249
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
IMRD D G S+GFGFI+++ E + +A++A+NG+ + +++ V A KK
Sbjct: 250 IMRD-DEGKSKGFGFINFEEPEQAASAVQALNGKDVNCKELYVGRAQKK 297
>gi|221061487|ref|XP_002262313.1| polyadenylate-binding protein [Plasmodium knowlesi strain H]
gi|193811463|emb|CAQ42191.1| polyadenylate-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 874
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L+ VTE +L+E+F G V ++ V +D VT GY +V + + DA+ A+
Sbjct: 16 ASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D GA N+F+ NLD +D K L+DTFS FG I++ K
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILS-CK 134
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 195
+ D + G S+ +GF+ Y+ E++ AIE +NG L ++ + V + K+ +
Sbjct: 135 VATD-EFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSER 185
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D + YGFV + EE A AI+ +N
Sbjct: 107 FVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGK-SKSYGFVHYEDEESAKEAIEKVN 165
Query: 88 MIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
I+L K + R +A+ D K NL++ N V E L FS +G I +
Sbjct: 166 GIQLGSKNVYVGHFIKRSERATNDTKF----TNLYVKNFPDSVTEAHLKQLFSPYGEITS 221
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNR-QITVSY 188
++ D N R F FI+Y E++ A+E +NG+ + + QI +Y
Sbjct: 222 ---MIVKTDNKN-RKFCFINYADSESAKNAMENLNGKKITDDGQIDHTY 266
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 91 LYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT 150
L K +N S++K G NL+I NLD +D++ L + F +G I T+ K+MRD D
Sbjct: 422 LKAKFDNLNMESKNKHQ---GVNLYIKNLDDAIDDQTLKELFEPYGTI-TSAKVMRD-DK 476
Query: 151 GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
S+GFGF+ + E ++ A+ M+ + + + + V A K++ + R
Sbjct: 477 EQSKGFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSR 524
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
L S ++Q Y+ NLD + ++ L ELF G + + V +D +G+GFV F
Sbjct: 429 LNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDD-KEQSKGFGFVCF 487
Query: 74 RSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL 108
+E+A+ A+ +++ + GKP+ V A + ++ L
Sbjct: 488 AQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRL 522
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
A+ YVG+L VTE +L+E+F G V+++ V +D VT GY +V + + DA+ A+
Sbjct: 16 ASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 75
Query: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
LN + G+P R+ + +D G N+F+ NLD +D K L+DTFS FG I++ K
Sbjct: 76 TLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSMFGNILS-CK 134
Query: 144 IMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 192
+ D + G S+ +GF+ Y+ E++ AIE +NG L ++ + V + KK
Sbjct: 135 VATD-EFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKK 182
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
+V NLD + + L++ F G +++ V D + YGFV + EE A AI+ +N
Sbjct: 107 FVKNLDKTIDNKALFDTFSMFGNILSCKVATDEFGK-SKNYGFVHYEDEESAKEAIEKVN 165
Query: 88 MIKLYGKPIRV-------NKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVT 140
++L K + V +A+ D K NL++ N V E L + FS +G I +
Sbjct: 166 GMQLGSKNVYVGHFIKKSERATNDTKF----TNLYVKNFPDTVTEAHLKELFSPYGEITS 221
Query: 141 NPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
++ D N R F FI+Y +++ A+E +NG+ +
Sbjct: 222 ---MIVKSDNKN-RKFCFINYSDADSARNAMENLNGKKIT 257
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
G NL+I NLD +D++ L + F +G I T+ K+M+D D S+GFGF+ + + E ++ A
Sbjct: 399 GVNLYIKNLDDSMDDQTLKELFEPYGTI-TSAKVMKD-DKDQSKGFGFVCFGTHEEANKA 456
Query: 171 IEAMNGQYLCNRQITVSYAYKKDTKGER 198
+ M+ + + + + V A K++ + R
Sbjct: 457 VTEMHLKIINGKPLYVGLAEKREQRLSR 484
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Y+ NLD + ++ L ELF G + + V KD + +G+GFV F + E+A+ A+ ++
Sbjct: 403 YIKNLDDSMDDQTLKELFEPYGTITSAKVMKDD-KDQSKGFGFVCFGTHEEANKAVTEMH 461
Query: 88 MIKLYGKPIRVNKASQDKKSL 108
+ + GKP+ V A + ++ L
Sbjct: 462 LKIINGKPLYVGLAEKREQRL 482
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.135 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,932,001,107
Number of Sequences: 23463169
Number of extensions: 462963829
Number of successful extensions: 7285862
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 35259
Number of HSP's successfully gapped in prelim test: 82972
Number of HSP's that attempted gapping in prelim test: 3685294
Number of HSP's gapped (non-prelim): 1261433
length of query: 377
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 233
effective length of database: 8,980,499,031
effective search space: 2092456274223
effective search space used: 2092456274223
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)