Citrus Sinensis ID: 017119
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Splicing factor 3B subunit 4 | Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. SF3B4 has been found in complex 'B' and 'C' as well. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron. | probable | Q09442 |
| Splicing factor 3B subunit 4 | Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. SF3B4 has been found in complex 'B' and 'C' as well. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron. | probable | Q8QZY9 |
| Splicing factor 3B subunit 4 | Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. SF3B4 has been found in complex 'B' and 'C' as well. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron. | probable | Q6AYL5 |
Prediction of Enzyme Commission Number
No EC number assigned to the protein, probably not an enzyme!
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 1B7F, chain A Confidence level:very confident Coverage over the Query: 23-189 View the alignment between query and template View the model in PyMOL |
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Template: 3SDE, chain B Confidence level:probable Coverage over the Query: 22-219 View the alignment between query and template View the model in PyMOL |
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Template: 3PGW, chain B Confidence level:probable Coverage over the Query: 221-228 View the alignment between query and template View the model in PyMOL |