Query 017120
Match_columns 377
No_of_seqs 160 out of 803
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 05:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017120.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017120hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 1E-111 2E-116 833.3 31.0 329 24-375 47-386 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 4.4E-52 9.5E-57 392.6 21.2 248 82-376 1-263 (263)
3 PF14416 PMR5N: PMR5 N termina 99.9 4.9E-27 1.1E-31 169.6 4.9 54 28-81 2-55 (55)
4 cd01842 SGNH_hydrolase_like_5 98.1 2.4E-05 5.2E-10 70.1 9.3 51 191-261 52-103 (183)
5 cd04502 SGNH_hydrolase_like_7 74.0 35 0.00075 29.5 9.8 31 230-260 69-99 (171)
6 COG2845 Uncharacterized protei 74.0 3.9 8.5E-05 40.3 3.9 29 92-120 111-140 (354)
7 cd01836 FeeA_FeeB_like SGNH_hy 72.6 59 0.0013 28.5 11.1 32 231-262 87-118 (191)
8 cd01829 SGNH_hydrolase_peri2 S 68.9 4.1 9E-05 36.3 2.7 63 188-262 58-120 (200)
9 cd01834 SGNH_hydrolase_like_2 66.0 3.1 6.7E-05 36.4 1.3 15 96-110 1-15 (191)
10 cd01841 NnaC_like NnaC (CMP-Ne 61.9 3.8 8.3E-05 35.7 1.1 33 231-263 71-103 (174)
11 cd01841 NnaC_like NnaC (CMP-Ne 48.0 75 0.0016 27.4 7.0 13 97-109 1-13 (174)
12 cd01825 SGNH_hydrolase_peri1 S 46.4 8.1 0.00017 33.8 0.6 34 230-263 76-109 (189)
13 cd01844 SGNH_hydrolase_like_6 46.2 9.7 0.00021 33.4 1.0 10 98-107 1-10 (177)
14 cd01835 SGNH_hydrolase_like_3 43.7 10 0.00023 33.5 0.9 29 230-261 94-122 (193)
15 cd01832 SGNH_hydrolase_like_1 43.4 10 0.00022 33.2 0.7 30 230-261 87-116 (185)
16 cd01838 Isoamyl_acetate_hydrol 39.5 12 0.00027 32.7 0.7 33 230-262 87-119 (199)
17 PRK10528 multifunctional acyl- 39.5 16 0.00034 32.8 1.3 15 96-110 10-24 (191)
18 cd01820 PAF_acetylesterase_lik 38.9 25 0.00054 31.9 2.6 32 231-262 109-140 (214)
19 cd01827 sialate_O-acetylestera 36.9 16 0.00034 32.1 0.9 32 231-262 89-120 (188)
20 cd01822 Lysophospholipase_L1_l 36.6 15 0.00033 31.6 0.8 30 231-262 84-114 (177)
21 cd01831 Endoglucanase_E_like E 35.8 16 0.00035 31.7 0.8 27 231-257 77-103 (169)
22 cd04506 SGNH_hydrolase_YpmR_li 35.4 2.1E+02 0.0045 25.2 8.1 29 230-258 101-129 (204)
23 PF00185 OTCace: Aspartate/orn 34.9 23 0.0005 31.1 1.6 25 95-120 1-25 (158)
24 PF12026 DUF3513: Domain of un 33.2 4.6 0.0001 37.5 -3.2 17 94-110 132-148 (210)
25 cd01839 SGNH_arylesterase_like 31.4 21 0.00045 32.1 0.8 31 231-261 101-136 (208)
26 cd01830 XynE_like SGNH_hydrola 31.0 22 0.00047 32.0 0.8 31 230-262 101-131 (204)
27 PF09949 DUF2183: Uncharacteri 30.5 36 0.00078 27.8 2.0 21 88-108 56-76 (100)
28 cd04501 SGNH_hydrolase_like_4 26.9 28 0.00061 30.4 0.8 29 231-261 79-107 (183)
29 cd01823 SEST_like SEST_like. A 25.5 5.3E+02 0.011 23.6 12.1 32 230-261 126-157 (259)
30 cd01840 SGNH_hydrolase_yrhL_li 24.9 36 0.00077 29.1 1.1 17 98-114 1-17 (150)
31 PRK14805 ornithine carbamoyltr 24.3 42 0.00091 32.9 1.6 25 94-120 145-169 (302)
32 PF06462 Hyd_WA: Propeller; I 23.7 78 0.0017 20.1 2.2 21 249-269 8-29 (32)
33 cd01821 Rhamnogalacturan_acety 23.6 36 0.00077 30.3 0.8 29 230-260 89-117 (198)
34 PRK03670 competence damage-ind 23.0 58 0.0013 31.1 2.2 23 352-374 150-172 (252)
35 PF02177 APP_N: Amyloid A4 N-t 22.7 48 0.001 27.3 1.3 14 30-43 16-29 (102)
36 KOG3482 Small nuclear ribonucl 21.3 80 0.0017 24.3 2.2 22 80-101 2-23 (79)
37 PF01861 DUF43: Protein of unk 20.4 46 0.001 31.6 0.9 12 94-105 43-54 (243)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=9.8e-112 Score=833.25 Aligned_cols=329 Identities=30% Similarity=0.590 Sum_probs=285.1
Q ss_pred CCCCCCCCCccCceeeCCCCCCcCCCCCC-CcccccCccCCCCCCCCCceeeecCCCCCCCCCCHHHHHHHHcCCeeEEe
Q 017120 24 EIGAEKCDLFTGDWVPNLKGPVYTNASCP-LIESHQNCMGNGRPDSGYLYWRWRPENCELPPFNAENFLYLMRNKTWALI 102 (377)
Q Consensus 24 ~~~~~~Cd~~~G~WV~d~~~p~Y~~~~Cp-~i~~~~~C~~nGRpD~~yl~WrWqP~~C~L~~fd~~~fl~~lrgk~i~fV 102 (377)
.++.+.||+|+|+||+|+++|+|++.+|| ||++++||++|||||++|++|||||++|+||||||.+||++|||||||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 36688899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ehhhhHHHHHHHHHhhcccccceeeeeccccceeeEEeccCceEEEEEeccccccccccccCCCCccceEEEEecccchh
Q 017120 103 GDSISRNHVQSLLCMLSTVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKLDKK 182 (377)
Q Consensus 103 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wspfLv~~~~~~~~~~~~~~~~~l~lD~~~~~ 182 (377)
||||+|||||||+|||+++++...+....+.+.++|+|++||+||+||||||||+.+.. . +...|+||+++.
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~---~----~~~~l~LD~id~- 198 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAV---Q----GKRVLKLEEISG- 198 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecC---C----CceeEEecCcch-
Confidence 99999999999999999977655444455567889999999999999999999997632 1 234699999875
Q ss_pred HHhhcCCccEEEEecceecccccccccCCeEeccccC--CCCcccccchHHHHHHHHHHHHHHHH--hcCCCcEEEEeeC
Q 017120 183 WTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYC--PKRNLTELGFDFAYRKTLSSVMDFIA--ASKHKGLVFFRTS 258 (377)
Q Consensus 183 ~~~~~~~~DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~--~~~~~~~~~~~~Ayr~al~t~~~~v~--~~~~~~~vffRt~ 258 (377)
+++.|+++|||||||||||.+++ .+.||.++ ...++++|++..||++||+||++||+ +++.+|+|||||+
T Consensus 199 ~a~~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~ 272 (387)
T PLN02629 199 NANAWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSI 272 (387)
T ss_pred hhhhhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEec
Confidence 58899999999999999999864 34566554 34467899999999999999999997 6788999999999
Q ss_pred CCCCCCCCCCCCCC-----CC-CcccccCCCCcccchhhHHHhhhhHHHHHHHhhhhccCCceeEEEecccccccCCCCC
Q 017120 259 TPDHFENGEWHNGG-----SC-QKMMPVKEGDIELKDLNRILRNIELEEFEKAVPRASQNGVKLKLLDFTNLLLLRPDGH 332 (377)
Q Consensus 259 sP~Hf~~g~W~~gg-----~C-~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDIt~ls~~R~DaH 332 (377)
||+||+||+||+|| +| ++|+|+.+.++ .+....+|+ +++++.+.++.+|++||||+||++|||||
T Consensus 273 SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--------~ve~v~~~~~~~v~lLDIT~ls~lR~DgH 343 (387)
T PLN02629 273 SPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--------VVDEVIRGMHNPAYLLDITLLSELRKDGH 343 (387)
T ss_pred CcccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--------HHHHHHHhcCCceEEEechhhhhcCCCCC
Confidence 99999999999865 68 79999985543 344444443 23344445678999999999999999999
Q ss_pred CCCcccCCCcccCCCCCCCCCcccccCCChhhHHHHHHHHHHh
Q 017120 333 PGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIMETVV 375 (377)
Q Consensus 333 ps~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~ 375 (377)
||+|++..+.++++++..++||+||||||||||||||||++|+
T Consensus 344 Ps~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 344 PSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 9999866556666777888999999999999999999999996
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=4.4e-52 Score=392.58 Aligned_cols=248 Identities=38% Similarity=0.744 Sum_probs=187.3
Q ss_pred CCCCCHHHHHHHHcCCeeEEeehhhhHHHHHHHHHhhccccc-----ceeeeeccccceeeEEeccCceEEEEEeccccc
Q 017120 82 LPPFNAENFLYLMRNKTWALIGDSISRNHVQSLLCMLSTVEQ-----AVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLA 156 (377)
Q Consensus 82 L~~fd~~~fl~~lrgk~i~fVGDSl~Rn~~~SL~clL~~~~~-----~~~~~~~~~~~~~~~~f~~~n~tv~f~wspfLv 156 (377)
|++||+.++|++||||+|+|||||++||||+||+|+|.+... +.........+...+.|+.+|+||+|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 689999999999999999999999999999999999998555 211111222345677889999999999999999
Q ss_pred cccccccCCCCccceEEEEecccchhHHhhcC----CccEEEEecceecccccccccCCeEeccccCCCCcccccchHHH
Q 017120 157 KAAIFEDYNGVSTSEVQLHLDKLDKKWTEQYL----NLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFA 232 (377)
Q Consensus 157 ~~~~~~~~~~~~~~~~~l~lD~~~~~~~~~~~----~~DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~A 232 (377)
+. +|.++..++..+. .+||||||+|+||.+...++.. +++ .++....+
T Consensus 81 ~~-----------------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~----------~~~-~~~~~~~~ 132 (263)
T PF13839_consen 81 DQ-----------------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFIEW----------GDN-KEINPLEA 132 (263)
T ss_pred cc-----------------ccccchhhhccccccccCCCEEEEEcchhhhhcchhccc----------CCC-cCcchHHH
Confidence 64 1222222233333 8999999999999997665433 122 55667899
Q ss_pred HHHHHHHHHHHHH--hcCCC--cEEEEeeCCCCCCCCCCCCCCCCCCcccccCCCCcccchhhHHHhhhhHHHHHHHhhh
Q 017120 233 YRKTLSSVMDFIA--ASKHK--GLVFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIELKDLNRILRNIELEEFEKAVPR 308 (377)
Q Consensus 233 yr~al~t~~~~v~--~~~~~--~~vffRt~sP~Hf~~g~W~~gg~C~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (377)
|+..|+++++++. +++.+ ++||||+++|.||++++|++||.|+... ..+ . .++. ++++..+...
T Consensus 133 y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~~~~~~~gg~c~~~~---~~~--~--~~~~-----~~~~~~~~~~ 200 (263)
T PF13839_consen 133 YRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFEGGDWNSGGSCNPPR---REE--I--TNEQ-----IDELNEALRE 200 (263)
T ss_pred HHHHHHHHHHHHHhhhccccccceEEEEecCCccccccccccCCCcCccc---ccC--C--CHHH-----HHHHHHHHHH
Confidence 9999999999998 44444 9999999999999999999999997111 001 1 1111 1222222111
Q ss_pred hccCCceeEEEec-ccccccCC-CCCCCCcccCCCcccCCCCCCCCCcccccCCChhhHHHHHHHHHHhc
Q 017120 309 ASQNGVKLKLLDF-TNLLLLRP-DGHPGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIMETVVN 376 (377)
Q Consensus 309 ~~~~~~~v~lLDI-t~ls~~R~-DaHps~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~~ 376 (377)
+.....++++||| |.|+.+|+ ||||++|++.... ..+||+|||+|||+|+||+|||++|++
T Consensus 201 ~~~~~~~~~~ldi~~~~~~~r~~d~H~~~~~~~~~~-------~~~Dc~Hw~~p~v~d~~~~lL~~~lcn 263 (263)
T PF13839_consen 201 ALKKNSRVHLLDIFTMLSSFRPDDAHPGIYRNQWPR-------QPQDCLHWCLPGVIDTWNELLLNLLCN 263 (263)
T ss_pred HhhcCCCceeeeecchhhhccccccCcccccCCCCC-------CCCCCcCcCCCcHHHHHHHHHHHHhhC
Confidence 1136778999999 99999999 9999999875432 258999999999999999999999974
No 3
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.93 E-value=4.9e-27 Score=169.57 Aligned_cols=54 Identities=54% Similarity=1.322 Sum_probs=52.6
Q ss_pred CCCCCccCceeeCCCCCCcCCCCCCCcccccCccCCCCCCCCCceeeecCCCCC
Q 017120 28 EKCDLFTGDWVPNLKGPVYTNASCPLIESHQNCMGNGRPDSGYLYWRWRPENCE 81 (377)
Q Consensus 28 ~~Cd~~~G~WV~d~~~p~Y~~~~Cp~i~~~~~C~~nGRpD~~yl~WrWqP~~C~ 81 (377)
+.||+|+|+||+|+++|||++++||||+.+|+|++|||||++|++|||||++|+
T Consensus 2 ~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 2 KRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 579999999999999999999999999999999999999999999999999996
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.06 E-value=2.4e-05 Score=70.12 Aligned_cols=51 Identities=22% Similarity=0.389 Sum_probs=40.1
Q ss_pred cEEEEecceecccccccccCCeEeccccCCCCcccccchHHHHHHHHHHHHHHHH-hcCCCcEEEEeeCCCC
Q 017120 191 DYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLSSVMDFIA-ASKHKGLVFFRTSTPD 261 (377)
Q Consensus 191 DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~-~~~~~~~vffRt~sP~ 261 (377)
||||||+|.|=.. +|. + ...+-|++-|.++..-++ +-++++++||.|++|-
T Consensus 52 DVIi~Ns~LWDl~---ry~----------------~-~~~~~Y~~NL~~Lf~rLk~~lp~~allIW~tt~Pv 103 (183)
T cd01842 52 DLVIMNSCLWDLS---RYQ----------------R-NSMKTYRENLERLFSKLDSVLPIECLIVWNTAMPV 103 (183)
T ss_pred eEEEEecceeccc---ccC----------------C-CCHHHHHHHHHHHHHHHHhhCCCccEEEEecCCCC
Confidence 9999999999322 221 0 135789999999998887 5678899999999996
No 5
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=74.04 E-value=35 Score=29.51 Aligned_cols=31 Identities=10% Similarity=0.065 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTP 260 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP 260 (377)
.+.|+..++++++.+....+++++++-+..|
T Consensus 69 ~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p 99 (171)
T cd04502 69 PEEVLRDFRELVNRIRAKLPDTPIAIISIKP 99 (171)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcEEEEEecC
Confidence 4567777777777665334567788877655
No 6
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.03 E-value=3.9 Score=40.29 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=24.5
Q ss_pred HHHc-CCeeEEeehhhhHHHHHHHHHhhcc
Q 017120 92 YLMR-NKTWALIGDSISRNHVQSLLCMLST 120 (377)
Q Consensus 92 ~~lr-gk~i~fVGDSl~Rn~~~SL~clL~~ 120 (377)
+.++ +++|+|||||+++..-+.|...|.+
T Consensus 111 ~k~~~a~kvLvvGDslm~gla~gl~~al~t 140 (354)
T COG2845 111 AKSRDADKVLVVGDSLMQGLAEGLDKALAT 140 (354)
T ss_pred hhCCCCCEEEEechHHhhhhHHHHHHHhcc
Confidence 3444 7999999999999999998887765
No 7
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=72.64 E-value=59 Score=28.49 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCC
Q 017120 231 FAYRKTLSSVMDFIAASKHKGLVFFRTSTPDH 262 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~H 262 (377)
+.|+..++++++.+....+.+.||+-+..|..
T Consensus 87 ~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~ 118 (191)
T cd01836 87 ARWRKQLAELVDALRAKFPGARVVVTAVPPLG 118 (191)
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEECCCCcc
Confidence 46777777777766523357889998876654
No 8
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=68.87 E-value=4.1 Score=36.27 Aligned_cols=63 Identities=10% Similarity=0.124 Sum_probs=36.2
Q ss_pred CCccEEEEecceecccccccccCCeEeccccCCCCcccccchHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCC
Q 017120 188 LNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLSSVMDFIAASKHKGLVFFRTSTPDH 262 (377)
Q Consensus 188 ~~~DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~H 262 (377)
..+|+||+..|..=.... ..+.. .. ....-.+.+.|+..|+.+++.+. ..+.+|++-+..|.+
T Consensus 58 ~~pd~vii~~G~ND~~~~---~~~~~----~~---~~~~~~~~~~~~~~l~~lv~~~~--~~~~~vili~~pp~~ 120 (200)
T cd01829 58 EKPDVVVVFLGANDRQDI---RDGDG----YL---KFGSPEWEEEYRQRIDELLNVAR--AKGVPVIWVGLPAMR 120 (200)
T ss_pred CCCCEEEEEecCCCCccc---cCCCc----ee---ecCChhHHHHHHHHHHHHHHHHH--hCCCcEEEEcCCCCC
Confidence 568999999987632110 00000 00 00011245688888888877653 346789998887765
No 9
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=66.05 E-value=3.1 Score=36.40 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=13.7
Q ss_pred CCeeEEeehhhhHHH
Q 017120 96 NKTWALIGDSISRNH 110 (377)
Q Consensus 96 gk~i~fVGDSl~Rn~ 110 (377)
|++|+++|||++...
T Consensus 1 ~~~v~~~GDSit~g~ 15 (191)
T cd01834 1 GDRIVFIGNSITDRG 15 (191)
T ss_pred CCEEEEeCCChhhcc
Confidence 789999999999976
No 10
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=61.91 E-value=3.8 Score=35.67 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCC
Q 017120 231 FAYRKTLSSVMDFIAASKHKGLVFFRTSTPDHF 263 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~Hf 263 (377)
+.|+..++++++.+....++++||+-++.|...
T Consensus 71 ~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~ 103 (174)
T cd01841 71 NQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLE 103 (174)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCc
Confidence 456667777776665344678899999888764
No 11
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=48.03 E-value=75 Score=27.35 Aligned_cols=13 Identities=38% Similarity=0.572 Sum_probs=11.6
Q ss_pred CeeEEeehhhhHH
Q 017120 97 KTWALIGDSISRN 109 (377)
Q Consensus 97 k~i~fVGDSl~Rn 109 (377)
|+|+|+|||++..
T Consensus 1 ~~iv~~GdS~t~~ 13 (174)
T cd01841 1 KNIVFIGDSLFEG 13 (174)
T ss_pred CCEEEEcchhhhc
Confidence 6899999999974
No 12
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=46.36 E-value=8.1 Score=33.84 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTPDHF 263 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~Hf 263 (377)
.+.|+..|+++++.+....++++|++-+..|.-+
T Consensus 76 ~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~ 109 (189)
T cd01825 76 ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQ 109 (189)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhc
Confidence 3577888888887775334688999998877543
No 13
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=46.19 E-value=9.7 Score=33.44 Aligned_cols=10 Identities=50% Similarity=1.022 Sum_probs=0.0
Q ss_pred eeEEeehhhh
Q 017120 98 TWALIGDSIS 107 (377)
Q Consensus 98 ~i~fVGDSl~ 107 (377)
||+|+||||+
T Consensus 1 ~iv~~GDSit 10 (177)
T cd01844 1 PWVFYGTSIS 10 (177)
T ss_pred CEEEEeCchh
No 14
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=43.73 E-value=10 Score=33.53 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTPD 261 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~ 261 (377)
.+.|+..++.+++.+. .++.|++-+..|.
T Consensus 94 ~~~~~~~~~~ii~~~~---~~~~vi~~~~~p~ 122 (193)
T cd01835 94 ARAFLFGLNQLLEEAK---RLVPVLVVGPTPV 122 (193)
T ss_pred HHHHHHHHHHHHHHHh---cCCcEEEEeCCCc
Confidence 3577777777766543 2456787776553
No 15
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=43.36 E-value=10 Score=33.19 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTPD 261 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~ 261 (377)
.+.|+..++++++.+. .+++.||+-|..|.
T Consensus 87 ~~~~~~~~~~~i~~i~--~~~~~vil~~~~~~ 116 (185)
T cd01832 87 PDTYRADLEEAVRRLR--AAGARVVVFTIPDP 116 (185)
T ss_pred HHHHHHHHHHHHHHHH--hCCCEEEEecCCCc
Confidence 3467777777777664 45667888776655
No 16
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=39.50 E-value=12 Score=32.74 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTPDH 262 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~H 262 (377)
.+.|+..++.+++.+....++++||+-|..|..
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~~ii~~t~~~~~ 119 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLSPKTKVILITPPPVD 119 (199)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEeCCCCCC
Confidence 457888888888776533367889999887754
No 17
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=39.45 E-value=16 Score=32.81 Aligned_cols=15 Identities=33% Similarity=0.501 Sum_probs=12.9
Q ss_pred CCeeEEeehhhhHHH
Q 017120 96 NKTWALIGDSISRNH 110 (377)
Q Consensus 96 gk~i~fVGDSl~Rn~ 110 (377)
+.+|+|+|||++...
T Consensus 10 ~~~iv~~GDSit~G~ 24 (191)
T PRK10528 10 ADTLLILGDSLSAGY 24 (191)
T ss_pred CCEEEEEeCchhhcC
Confidence 679999999998764
No 18
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=38.90 E-value=25 Score=31.92 Aligned_cols=32 Identities=6% Similarity=0.065 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCC
Q 017120 231 FAYRKTLSSVMDFIAASKHKGLVFFRTSTPDH 262 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~H 262 (377)
+.|...++.+++.+....+++.|++-+..|..
T Consensus 109 ~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~ 140 (214)
T cd01820 109 EEIAEGILAIVEEIREKLPNAKILLLGLLPRG 140 (214)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 34556666666655434456788888887754
No 19
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=36.93 E-value=16 Score=32.10 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCC
Q 017120 231 FAYRKTLSSVMDFIAASKHKGLVFFRTSTPDH 262 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~H 262 (377)
+.|+..++.+++.+....+++.+|+-|..|..
T Consensus 89 ~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~ 120 (188)
T cd01827 89 DDFKKDYETMIDSFQALPSKPKIYICYPIPAY 120 (188)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEeCCccc
Confidence 46777777777766534457788888877754
No 20
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=36.64 E-value=15 Score=31.63 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCC-CCC
Q 017120 231 FAYRKTLSSVMDFIAASKHKGLVFFRTST-PDH 262 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~~~~~~~~vffRt~s-P~H 262 (377)
+.|+..|+.+++.+. ..+++|++-++. |.+
T Consensus 84 ~~~~~~l~~li~~~~--~~~~~vil~~~~~~~~ 114 (177)
T cd01822 84 DQTRANLRQMIETAQ--ARGAPVLLVGMQAPPN 114 (177)
T ss_pred HHHHHHHHHHHHHHH--HCCCeEEEEecCCCCc
Confidence 456677777766653 225677777653 444
No 21
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=35.75 E-value=16 Score=31.72 Aligned_cols=27 Identities=0% Similarity=0.027 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEee
Q 017120 231 FAYRKTLSSVMDFIAASKHKGLVFFRT 257 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~~~~~~~~vffRt 257 (377)
..|+..++.+++.+....+++.+|+-+
T Consensus 77 ~~~~~~~~~li~~i~~~~p~~~i~~~~ 103 (169)
T cd01831 77 EDFTNAYVEFIEELRKRYPDAPIVLML 103 (169)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 355666666666554344566777654
No 22
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=35.35 E-value=2.1e+02 Score=25.24 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTS 258 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~ 258 (377)
.+.|+..|+++++.+....++++|++-++
T Consensus 101 ~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~ 129 (204)
T cd04506 101 EETYQNNLKKIFKEIRKLNPDAPIFLVGL 129 (204)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 45788888888887763345667776664
No 23
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=34.89 E-value=23 Score=31.09 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=20.6
Q ss_pred cCCeeEEeehhhhHHHHHHHHHhhcc
Q 017120 95 RNKTWALIGDSISRNHVQSLLCMLST 120 (377)
Q Consensus 95 rgk~i~fVGDSl~Rn~~~SL~clL~~ 120 (377)
.|++|+|||| ..-|...||+.+|..
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~~ 25 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLAK 25 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHHH
Confidence 4899999999 546788899988875
No 24
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=33.19 E-value=4.6 Score=37.49 Aligned_cols=17 Identities=24% Similarity=0.567 Sum_probs=13.9
Q ss_pred HcCCeeEEeehhhhHHH
Q 017120 94 MRNKTWALIGDSISRNH 110 (377)
Q Consensus 94 lrgk~i~fVGDSl~Rn~ 110 (377)
|-+.+++||||+|.|+-
T Consensus 132 l~ahkLVfiGDTl~r~~ 148 (210)
T PF12026_consen 132 LSAHKLVFIGDTLCREA 148 (210)
T ss_dssp HHHHHHHHHHHHHHHC-
T ss_pred EEeeeeeeeccHHHHHh
Confidence 56778999999999853
No 25
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.39 E-value=21 Score=32.08 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHH-hc----CCCcEEEEeeCCCC
Q 017120 231 FAYRKTLSSVMDFIA-AS----KHKGLVFFRTSTPD 261 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~-~~----~~~~~vffRt~sP~ 261 (377)
+.|+..++++++.+. .. .+.++|++-+..|-
T Consensus 101 ~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~ 136 (208)
T cd01839 101 AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI 136 (208)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc
Confidence 567777877777765 22 25677888776664
No 26
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.01 E-value=22 Score=32.03 Aligned_cols=31 Identities=13% Similarity=-0.117 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTPDH 262 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~H 262 (377)
.+.|+..|+++++.+. ....+|++-|..|-.
T Consensus 101 ~~~~~~~l~~ii~~~~--~~~~~vil~t~~P~~ 131 (204)
T cd01830 101 AEELIAGYRQLIRRAH--ARGIKVIGATITPFE 131 (204)
T ss_pred HHHHHHHHHHHHHHHH--HCCCeEEEecCCCCC
Confidence 3567777887777664 235789998988854
No 27
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=30.55 E-value=36 Score=27.76 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=15.6
Q ss_pred HHHHHHHcCCeeEEeehhhhH
Q 017120 88 ENFLYLMRNKTWALIGDSISR 108 (377)
Q Consensus 88 ~~fl~~lrgk~i~fVGDSl~R 108 (377)
+.+++..-+++.++||||--.
T Consensus 56 ~~i~~~fP~~kfiLIGDsgq~ 76 (100)
T PF09949_consen 56 ERILRDFPERKFILIGDSGQH 76 (100)
T ss_pred HHHHHHCCCCcEEEEeeCCCc
Confidence 345556678999999999543
No 28
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=26.91 E-value=28 Score=30.37 Aligned_cols=29 Identities=10% Similarity=0.169 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCCC
Q 017120 231 FAYRKTLSSVMDFIAASKHKGLVFFRTSTPD 261 (377)
Q Consensus 231 ~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~ 261 (377)
+.|.+.++.+++.+. .....+|+-+..|.
T Consensus 79 ~~~~~~~~~li~~~~--~~~~~~il~~~~p~ 107 (183)
T cd04501 79 EMIKDNIRSMVELAE--ANGIKVILASPLPV 107 (183)
T ss_pred HHHHHHHHHHHHHHH--HCCCcEEEEeCCCc
Confidence 467777777777663 23457777777664
No 29
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=25.53 E-value=5.3e+02 Score=23.64 Aligned_cols=32 Identities=16% Similarity=-0.036 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTPD 261 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~ 261 (377)
...|+..|+.+++-|....++++|++-++.+-
T Consensus 126 ~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~ 157 (259)
T cd01823 126 LDEVGARLKAVLDRIRERAPNARVVVVGYPRL 157 (259)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEeccccc
Confidence 44666677777766653456788999997654
No 30
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=24.95 E-value=36 Score=29.10 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=12.2
Q ss_pred eeEEeehhhhHHHHHHH
Q 017120 98 TWALIGDSISRNHVQSL 114 (377)
Q Consensus 98 ~i~fVGDSl~Rn~~~SL 114 (377)
.|.|+|||++-..-..|
T Consensus 1 ~v~~~GDSv~~~~~~~~ 17 (150)
T cd01840 1 DITAIGDSVMLDSSPAL 17 (150)
T ss_pred CeeEEeehHHHchHHHH
Confidence 37899999998653333
No 31
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=24.35 E-value=42 Score=32.88 Aligned_cols=25 Identities=24% Similarity=0.331 Sum_probs=20.8
Q ss_pred HcCCeeEEeehhhhHHHHHHHHHhhcc
Q 017120 94 MRNKTWALIGDSISRNHVQSLLCMLST 120 (377)
Q Consensus 94 lrgk~i~fVGDSl~Rn~~~SL~clL~~ 120 (377)
++|++|+||||. .|...|++.++..
T Consensus 145 l~g~kva~vGD~--~~v~~S~~~~~~~ 169 (302)
T PRK14805 145 VSKVKLAYVGDG--NNVTHSLMYGAAI 169 (302)
T ss_pred cCCcEEEEEcCC--CccHHHHHHHHHH
Confidence 578999999994 5688999888864
No 32
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=23.74 E-value=78 Score=20.11 Aligned_cols=21 Identities=38% Similarity=0.800 Sum_probs=17.0
Q ss_pred CCcEEEEee-CCCCCCCCCCCC
Q 017120 249 HKGLVFFRT-STPDHFENGEWH 269 (377)
Q Consensus 249 ~~~~vffRt-~sP~Hf~~g~W~ 269 (377)
..+.+++|+ ++|...+|..|-
T Consensus 8 ~~G~v~~R~Gis~~~P~G~~W~ 29 (32)
T PF06462_consen 8 SDGSVYFRTGISPSNPEGTSWE 29 (32)
T ss_pred CCCCEEEECcCCCCCCCCCCcE
Confidence 467899998 899888877773
No 33
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=23.61 E-value=36 Score=30.27 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEeeCCC
Q 017120 230 DFAYRKTLSSVMDFIAASKHKGLVFFRTSTP 260 (377)
Q Consensus 230 ~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP 260 (377)
.+.|+..|+++++.+. ..+..+++-|..|
T Consensus 89 ~~~~~~nl~~ii~~~~--~~~~~~il~tp~~ 117 (198)
T cd01821 89 YTTYKEYLRRYIAEAR--AKGATPILVTPVT 117 (198)
T ss_pred HHHHHHHHHHHHHHHH--HCCCeEEEECCcc
Confidence 4578888888877664 2356677766554
No 34
>PRK03670 competence damage-inducible protein A; Provisional
Probab=23.04 E-value=58 Score=31.08 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=19.4
Q ss_pred CCcccccCCChhhHHHHHHHHHH
Q 017120 352 NDCLHWCLPGPIDTWNDLIMETV 374 (377)
Q Consensus 352 ~DC~HWCLPGv~DtWNelL~~~L 374 (377)
..|.++||||||-....||-..+
T Consensus 150 ~~~~v~~lPGvP~e~~~M~~~~v 172 (252)
T PRK03670 150 KGTKIFVLPGMPREMKAMLEKEV 172 (252)
T ss_pred CCeEEEEeCCChHHHHHHHHHHH
Confidence 45899999999999999887644
No 35
>PF02177 APP_N: Amyloid A4 N-terminal heparin-binding; InterPro: IPR015849 Amyloid-beta precursor protein (APP, or A4) is associated with Alzheimer's disease (AD), because one of its breakdown products, amyloid-beta (A-beta), aggregates to form amyloid or senile plaques [, ]. Mutations in APP or in proteins that process APP have been linked with early-onset, familial AD. Individuals with Down's syndrome carry an extra copy of chromosome 21, which contains the APP gene, and almost invariably develop amyloid plaques and Alzheimer's symptoms. APP is important for the neurogenesis and neuronal regeneration, either through the intact protein, or through its many breakdown products []. APP consists of a large N-terminal extracellular region containing heparin-binding and copper-binding sites, a short hydrophobic transmembrane domain, and a short C-terminal intracellular domain. The N-terminal region is similar in structure to cysteine-rich growth factors and appears to function as a cell surface receptor, contributing to neurite growth, neuronal adhesion, axonogenesis and cell mobility []. APP acts as a kinesin I membrane receptor to mediate the axonal transport of beta-secretase and presenilin 1. The N-terminal domain can regulate neurite outgrowth through its binding to heparin and collagen I and IV, which are components of the extracellular matrix. APP is also coupled to apoptosis-inducing pathways, and is involved in copper homeostasis/oxidative stress through copper ion reduction, where copper-metallated APP induces neuronal death []. The C-terminal intracellular domain appears to be involved in transcription regulation through protein-protein interactions. APP can promote transcription activation through binding to APBB1/Tip60, and may bind to the adaptor protein FE65 to transactivate a wide variety of different promoters. APP can be processed by different sets of enzymes: In the non-amyloidogenic (non-plaque-forming) pathway, APP is cleaved by alpha-secretase to yield a soluble N-terminal sAPP-alpha (neuroprotective) and a membrane-bound CTF-alpha. CTF-alpha is broken-down by presenilin-containing gamma-secretase to yield soluble p3 and membrane-bound AICD (nuclear signalling). In the amyloidogenic pathway (plaque-forming), APP is broken down by beta-secretase to yield soluble sAPP-beta and membrane-bound CTF-beta. CTF-beta is broken down by gamma-secretase to yield soluble amyloid-beta and membrane-bound AICD. Amyloid-beta is required for neuronal function, but can aggregate to form amyloid plaques that seem to disrupt brain cells by clogging points of cell-cell contact. This entry represents a heparin-binding domain found at the N-terminal of the extracellular domain, which is itself found at the N-terminal of amyloidogenic glycoproteins such as amyloid-beta precursor protein (APP, or A4). The core of the heparin-binding domain has an unusual disulphide-rich fold, consisting of a beta-x-alpha-beta-loop-beta topology []. More information about these protein can be found at Protein of the Month: Amyloid-beta Precursor Protein [].; GO: 0005488 binding, 0016021 integral to membrane; PDB: 3KTM_E 1MWP_A 2FKL_A 1OWT_A.
Probab=22.69 E-value=48 Score=27.26 Aligned_cols=14 Identities=43% Similarity=0.904 Sum_probs=9.3
Q ss_pred CCCccCceeeCCCC
Q 017120 30 CDLFTGDWVPNLKG 43 (377)
Q Consensus 30 Cd~~~G~WV~d~~~ 43 (377)
=|+-.|+|++|+++
T Consensus 16 ~~~~~G~W~~Dp~~ 29 (102)
T PF02177_consen 16 MNLQTGRWEPDPSG 29 (102)
T ss_dssp E-TTTSSEEE-TTS
T ss_pred ccccCCceeeCCCC
Confidence 35778999999763
No 36
>KOG3482 consensus Small nuclear ribonucleoprotein (snRNP) SMF [RNA processing and modification]
Probab=21.28 E-value=80 Score=24.26 Aligned_cols=22 Identities=23% Similarity=0.295 Sum_probs=18.4
Q ss_pred CCCCCCCHHHHHHHHcCCeeEE
Q 017120 80 CELPPFNAENFLYLMRNKTWAL 101 (377)
Q Consensus 80 C~L~~fd~~~fl~~lrgk~i~f 101 (377)
|+..+.+|..||..|.||.++.
T Consensus 2 ~a~~PvNPKpFL~~l~gk~V~v 23 (79)
T KOG3482|consen 2 SAKQPVNPKPFLNGLTGKPVLV 23 (79)
T ss_pred CCcccCCchHHHhhccCCeEEE
Confidence 5556669999999999998876
No 37
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=20.35 E-value=46 Score=31.64 Aligned_cols=12 Identities=25% Similarity=0.562 Sum_probs=8.8
Q ss_pred HcCCeeEEeehh
Q 017120 94 MRNKTWALIGDS 105 (377)
Q Consensus 94 lrgk~i~fVGDS 105 (377)
|.||+|+|+||-
T Consensus 43 L~gk~il~lGDD 54 (243)
T PF01861_consen 43 LEGKRILFLGDD 54 (243)
T ss_dssp STT-EEEEES-T
T ss_pred ccCCEEEEEcCC
Confidence 689999999994
Done!