BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017121
(377 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XIP7|GTG1_ARATH GPCR-type G protein 1 OS=Arabidopsis thaliana GN=GTG1 PE=1 SV=1
Length = 468
Score = 617 bits (1591), Expect = e-176, Method: Compositional matrix adjust.
Identities = 318/377 (84%), Positives = 355/377 (94%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
MLPYYHCYLML NSGVR+ERA++GA LFL AFLYAFWRMG+HFPMPS +KGFFT+PQLVS
Sbjct: 92 MLPYYHCYLMLRNSGVRRERASVGAFLFLSAFLYAFWRMGVHFPMPSADKGFFTMPQLVS 151
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
RIGVIGVT+MAVL+GFGAVNLPYSY+SLFIREI+E++I +LERQL+QS ETCIAKKKKII
Sbjct: 152 RIGVIGVTLMAVLSGFGAVNLPYSYISLFIREIEEADIISLERQLIQSTETCIAKKKKII 211
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
LCQ+E++R QGSEE K SFF+RIVGTVVRSVQDDQKEQDIKI+EAEV+ALEELSKQLF
Sbjct: 212 LCQLEVERNQGSEENQKRSSFFRRIVGTVVRSVQDDQKEQDIKILEAEVEALEELSKQLF 271
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE+YELRQAK+AAAYSRTW+GH+QNLLGYA SIYCVYKM+KSLQSVVFKEAG+ DPVT
Sbjct: 272 LEVYELRQAKDAAAYSRTWKGHVQNLLGYACSIYCVYKMLKSLQSVVFKEAGTKDPVTTM 331
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
ISIFL+ FDIG++A LLSQYISLLFIGMLIV+SVRGFL N+MKFFFAVSRVGSGSSSNVV
Sbjct: 332 ISIFLRLFDIGVDAALLSQYISLLFIGMLIVISVRGFLTNLMKFFFAVSRVGSGSSSNVV 391
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
LFLSEIMGMYF+SSILLIRKSL EYR IIT+VLGG+IQFDFYHRWFDAIFVASAFLSL+
Sbjct: 392 LFLSEIMGMYFLSSILLIRKSLRNEYRGIITDVLGGDIQFDFYHRWFDAIFVASAFLSLV 451
Query: 361 LLSAHYTSRQADKHPID 377
LLSAHYTSRQ+DKH I+
Sbjct: 452 LLSAHYTSRQSDKHAIE 468
>sp|Q0WQG8|GTG2_ARATH GPCR-type G protein 2 OS=Arabidopsis thaliana GN=GTG2 PE=1 SV=2
Length = 467
Score = 616 bits (1588), Expect = e-176, Method: Compositional matrix adjust.
Identities = 322/377 (85%), Positives = 356/377 (94%), Gaps = 1/377 (0%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
MLPYYHCYLML N+GVR+ERAA+GA+LFL AFLYAFWRMGIHFPMPS +KGFF++PQLVS
Sbjct: 92 MLPYYHCYLMLRNTGVRRERAAVGALLFLTAFLYAFWRMGIHFPMPS-DKGFFSMPQLVS 150
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
RIGVIGVT+MAVL+GFGAVNLPYSY+SLFIREI+ESEIK+LERQLMQS+ETCIAKKKKI+
Sbjct: 151 RIGVIGVTLMAVLSGFGAVNLPYSYISLFIREIEESEIKSLERQLMQSMETCIAKKKKIL 210
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
LCQ+E++R SEE K +SFF+R VGTVVRSVQDDQKEQDIK+MEAEV+ LEELSKQLF
Sbjct: 211 LCQVEVERSLVSEEHQKGKSFFRRFVGTVVRSVQDDQKEQDIKLMEAEVEGLEELSKQLF 270
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LEIYELRQAK+AAA+SRTW+GH+QN LGYA SIYCVYKM+KSLQSVVFKEAG+ DPVTM
Sbjct: 271 LEIYELRQAKDAAAFSRTWKGHVQNFLGYACSIYCVYKMLKSLQSVVFKEAGTKDPVTMM 330
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
ISIFLQFFDIG++A LLSQYISLLFIGMLIV+SVRGFL N+MKFFFAVSRVGSGSSSNVV
Sbjct: 331 ISIFLQFFDIGVDAALLSQYISLLFIGMLIVISVRGFLTNLMKFFFAVSRVGSGSSSNVV 390
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
LFLSEIMGMYF+SSILLIRKSL EYR IIT+VLGG+IQFDFYHRWFDAIFVASAFLSLL
Sbjct: 391 LFLSEIMGMYFLSSILLIRKSLRNEYRGIITDVLGGDIQFDFYHRWFDAIFVASAFLSLL 450
Query: 361 LLSAHYTSRQADKHPID 377
LLSAHYTSRQ DKHPID
Sbjct: 451 LLSAHYTSRQIDKHPID 467
>sp|Q5F448|GPHR_CHICK Golgi pH regulator OS=Gallus gallus GN=GPR89 PE=2 SV=1
Length = 455
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/375 (45%), Positives = 252/375 (67%), Gaps = 12/375 (3%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
M+P+Y Y ++ N + + L A + L F+Y FW++G FP+ SP+ G +I QL+S
Sbjct: 89 MVPFYIGYFVVSNIRLLHRQKLLFACVLWLTFMYFFWKLGDPFPILSPKHGILSIEQLIS 148
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
R+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++ I+KKK+I
Sbjct: 149 RVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDADILALERRLLQTMDMIISKKKRIA 208
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
+ M Q E K F+ ++ +V SV +++ +++ EV ALEELS+QLF
Sbjct: 209 VAHRTM--FQRGEVHNKPTGFWG-MIKSVTTSVAGS---ENLSLIQQEVDALEELSRQLF 262
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE +L KE YS+T++G N LGY SIYCV+K+ + ++VF G DPVT
Sbjct: 263 LETADLHATKERIEYSKTFQGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRG 322
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +V
Sbjct: 323 IEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS--SSKSSNVIV 380
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
L L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+ SA S+L
Sbjct: 381 LLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFLVSALSSIL 439
Query: 361 LLSAHYTSRQA-DKH 374
L + +QA +KH
Sbjct: 440 FL--YLAHKQAPEKH 452
>sp|P0CG08|GPHRB_HUMAN Golgi pH regulator B OS=Homo sapiens GN=GPR89B PE=1 SV=1
Length = 455
Score = 322 bits (825), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/376 (44%), Positives = 248/376 (65%), Gaps = 10/376 (2%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
M+P+Y Y ++ N + ++ L + L L F+Y FW++G FP+ SP+ G +I QL+S
Sbjct: 89 MVPFYIGYFIVSNIRLLHKQRLLFSCLLWLTFMYFFWKLGDPFPILSPKHGILSIEQLIS 148
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
R+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++ I+KKK++
Sbjct: 149 RVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRMA 208
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
+ + M Q E K F+ G + +++ +++ EV ALEELS+QLF
Sbjct: 209 MARRTM--FQKGEVHNKPSGFW----GMIKSVTTSASGSENLTLIQQEVDALEELSRQLF 262
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE +L KE YS+T++G N LGY SIYCV+K+ + ++VF G DPVT
Sbjct: 263 LETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRG 322
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +V
Sbjct: 323 IEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS--SSKSSNVIV 380
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
L L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+ SA S+L
Sbjct: 381 LLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFLVSALSSIL 439
Query: 361 LLS-AHYTSRQADKHP 375
L AH + + P
Sbjct: 440 FLYLAHKQAPEKQMAP 455
>sp|B7ZAQ6|GPHRA_HUMAN Golgi pH regulator A OS=Homo sapiens GN=GPR89A PE=1 SV=2
Length = 455
Score = 322 bits (825), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/376 (44%), Positives = 248/376 (65%), Gaps = 10/376 (2%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
M+P+Y Y ++ N + ++ L + L L F+Y FW++G FP+ SP+ G +I QL+S
Sbjct: 89 MVPFYIGYFIVSNIRLLHKQRLLFSCLLWLTFMYFFWKLGDPFPILSPKHGILSIEQLIS 148
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
R+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++ I+KKK++
Sbjct: 149 RVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRMA 208
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
+ + M Q E K F+ G + +++ +++ EV ALEELS+QLF
Sbjct: 209 MARRTM--FQKGEVHNKPSGFW----GMIKSVTTSASGSENLTLIQQEVDALEELSRQLF 262
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE +L KE YS+T++G N LGY SIYCV+K+ + ++VF G DPVT
Sbjct: 263 LETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRG 322
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +V
Sbjct: 323 IEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS--SSKSSNVIV 380
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
L L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+ SA S+L
Sbjct: 381 LLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFLVSALSSIL 439
Query: 361 LLS-AHYTSRQADKHP 375
L AH + + P
Sbjct: 440 FLYLAHKQAPEKQMAP 455
>sp|B5X1G3|GPHR_SALSA Golgi pH regulator OS=Salmo salar GN=gpr89 PE=2 SV=1
Length = 455
Score = 322 bits (824), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/375 (44%), Positives = 253/375 (67%), Gaps = 12/375 (3%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
++P+Y Y ++ N + + + L A + F+Y FW++G FP+ SP+ G +I QL+S
Sbjct: 89 VVPFYIGYFVVSNIRLLQRQKLLFACVVWFTFMYFFWKLGDPFPILSPKHGILSIEQLIS 148
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
R+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + ES+I ALER+L+Q+++ ++KKK+I
Sbjct: 149 RVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTESDILALERRLLQTMDMIVSKKKRIA 208
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
+ + +M Q E++ K F+ G + +++ +++ EV ALEELS+QLF
Sbjct: 209 MTRRQM--YQRGEDQNKQTGFW----GMIKSVTSSPPGSENLSLIQQEVDALEELSRQLF 262
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE +L+ KE YS+T++G N LGY SIYCV+K+ + ++VF G DPVT
Sbjct: 263 LETVDLQATKERIEYSKTFQGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRG 322
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +V
Sbjct: 323 IEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS--SSKSSNVIV 380
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
L L++IMGMYFVSS+LL+R S+ +EYR I+TEVL GE+QF+FYHRWFD IF+ SA S+L
Sbjct: 381 LVLAQIMGMYFVSSVLLMRMSMPLEYRSIVTEVL-GELQFNFYHRWFDVIFLVSALSSIL 439
Query: 361 LLSAHYTSRQA-DKH 374
L + +QA +KH
Sbjct: 440 FL--YLAHKQAPEKH 452
>sp|Q5BIM9|GPHR_BOVIN Golgi pH regulator OS=Bos taurus GN=GPR89A PE=2 SV=2
Length = 455
Score = 322 bits (824), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/375 (44%), Positives = 250/375 (66%), Gaps = 12/375 (3%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
M+P+Y Y ++ N + ++ L + L L F+Y FW++G FP+ SP+ G +I QL+S
Sbjct: 89 MVPFYIGYFIVSNIRLLHKQRLLFSCLLWLTFMYFFWKLGDPFPILSPKHGILSIEQLIS 148
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
R+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++ I+KKK++
Sbjct: 149 RVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRMA 208
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
+ + M Q E K F+ G + +++ +++ EV ALEELS+QLF
Sbjct: 209 MTRRTM--FQKGEVHNKPSGFW----GMIKSVTTSAPGSENLTLIQQEVDALEELSRQLF 262
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE +L KE YS+T++G N LGY SIYCV+K+ + ++VF G DPVT
Sbjct: 263 LETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRG 322
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +V
Sbjct: 323 IEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS--SSKSSNVIV 380
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
L L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+ SA S+L
Sbjct: 381 LLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFLVSALSSIL 439
Query: 361 LLSAHYTSRQA-DKH 374
L + +QA +KH
Sbjct: 440 FL--YLAHKQAPEKH 452
>sp|Q6DDW6|GPHR_XENLA Golgi pH regulator OS=Xenopus laevis GN=gpr89-b PE=2 SV=1
Length = 455
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/373 (44%), Positives = 245/373 (65%), Gaps = 12/373 (3%)
Query: 3 PYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVSRI 62
P+Y Y ++ N + + L + L F+Y FW++G FP+ SP+ G +I QL+SR+
Sbjct: 91 PFYIGYFVVSNIRLLHRQRLLFSCTIWLTFMYFFWKLGDPFPILSPKHGILSIEQLISRV 150
Query: 63 GVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKIILC 122
GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++ ++KKK+I
Sbjct: 151 GVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDADILALERRLLQTMDMIVSKKKRIAAV 210
Query: 123 QMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLFLE 182
+ M Q EE K F+ G + +++ ++ EV ALEELS+QLFLE
Sbjct: 211 RRNM--FQRGEEHSKPSGFW----GMIKSVTSSAPVSENLYQIQQEVDALEELSRQLFLE 264
Query: 183 IYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMTIS 242
+L KE YS+T++G N LGY SIYCV+K+ + ++VF G DPVT I
Sbjct: 265 TADLHATKERIEYSKTFQGKYFNFLGYFFSIYCVWKIFMATINIVFDRVGKTDPVTRGIE 324
Query: 243 IFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVVLF 302
I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +VL
Sbjct: 325 ITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS--SSKSSNVIVLL 382
Query: 303 LSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLLLL 362
L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD IF+ SA S+L L
Sbjct: 383 LAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVIFLVSALSSILFL 441
Query: 363 SAHYTSRQA-DKH 374
+ +QA +KH
Sbjct: 442 --YLAHKQAPEKH 452
>sp|Q8BS95|GPHR_MOUSE Golgi pH regulator OS=Mus musculus GN=Gpr89a PE=2 SV=2
Length = 455
Score = 313 bits (803), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 248/375 (66%), Gaps = 12/375 (3%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
M+P+Y Y ++ N + ++ L + L L F+Y FW++G FP+ SP+ G +I QL+S
Sbjct: 89 MVPFYIGYFIVSNIQLLHKQRLLFSCLLWLTFMYFFWKLGDPFPILSPKHGILSIEQLIS 148
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
R+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++ I+KKK++
Sbjct: 149 RVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRMA 208
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
+ + M Q + + K + G + +++ +++ EV ALEELS+QLF
Sbjct: 209 VARRTM--FQRGDVQNKPSGLW----GMLKSVTASAPGSENLTLIQQEVDALEELSRQLF 262
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE +L KE YS+T++G N LGY SIYCV+K+ + ++V G DPVT
Sbjct: 263 LETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVLDRVGKTDPVTRG 322
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +V
Sbjct: 323 IEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS--SSKSSNVIV 380
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
L L++IMGMYFVSS+LLIR S+ EYR IITEVL GE+QF+FYHRWFD IF+ SA S+L
Sbjct: 381 LLLAQIMGMYFVSSVLLIRMSMPPEYRTIITEVL-GELQFNFYHRWFDVIFLVSALSSIL 439
Query: 361 LLSAHYTSRQA-DKH 374
L + +QA +KH
Sbjct: 440 FL--YLAHKQAPEKH 452
>sp|B2ZXD5|GPHR_CRIGR Golgi pH regulator OS=Cricetulus griseus GN=GPR89 PE=2 SV=1
Length = 455
Score = 313 bits (801), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 248/375 (66%), Gaps = 12/375 (3%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
M+P+Y Y ++ N + ++ L + L L F+Y FW++G FP+ SP+ G +I QL+S
Sbjct: 89 MVPFYIGYFIVSNIQLLHKQRLLFSCLLWLTFMYFFWKLGDPFPILSPKHGILSIEQLIS 148
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
R+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++ I+KKK++
Sbjct: 149 RVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRMA 208
Query: 121 LCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLF 180
+ + M Q E + K + G + +++ +++ EV ALEELS+QLF
Sbjct: 209 VARRTM--FQRGEVQNKPSGLW----GMLKSVTASAPGSENLTLIQQEVDALEELSRQLF 262
Query: 181 LEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKEAGSVDPVTMT 240
LE +L KE YS+T++G N LGY SIYCV+K+ + ++V G DPVT
Sbjct: 263 LETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVLDRVGKTDPVTRG 322
Query: 241 ISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSRVGSGSSSNVV 300
I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S S SS+ +V
Sbjct: 323 IEITVNYLGIQFDVKFWSQHISFILVGIIIVSSIRGLLITLTKFFYAIS--SSKSSNVIV 380
Query: 301 LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAIFVASAFLSLL 360
L L++IMGMYFVSS+LLIR S+ EYR IIT+VL GE+QF+FYHRWFD IF+ SA S+L
Sbjct: 381 LLLAQIMGMYFVSSVLLIRMSMPPEYRTIITQVL-GELQFNFYHRWFDVIFLVSALSSIL 439
Query: 361 LLSAHYTSRQA-DKH 374
L + +QA +KH
Sbjct: 440 FL--YLAHKQAPEKH 452
>sp|A6NKF9|GPHRC_HUMAN Putative Golgi pH regulator C OS=Homo sapiens GN=GPR89C PE=5 SV=2
Length = 320
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 218/326 (66%), Gaps = 10/326 (3%)
Query: 51 GFFTIPQLVSRIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIE 110
G +I QL+SR+GVIGVT+MA+L+GFGAVN PY+Y+S F+R + +++I ALER+L+Q+++
Sbjct: 4 GILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMD 63
Query: 111 TCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIMEAEVQ 170
I+KKK++ + + M Q E K F+ G + +++ +++ EV
Sbjct: 64 MIISKKKRMAMARRTM--FQKGEVHNKPSGFW----GMIKSVTTSASGSENLTLIQQEVD 117
Query: 171 ALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMIKSLQSVVFKE 230
ALEELS+QLFLE +L KE YS+T++G N LGY SIYCV+K+ + ++VF
Sbjct: 118 ALEELSRQLFLETADLYATKERIEYSKTFKGKYFNFLGYFFSIYCVWKIFMATINIVFDR 177
Query: 231 AGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLMNVMKFFFAVSR 290
G DPVT I I + + I + + SQ+IS + +G++IV S+RG L+ + KFF+A+S
Sbjct: 178 VGKTDPVTRGIEITVNYLGIQFDVKFWSQHISFILVGIIIVTSIRGLLITLTKFFYAIS- 236
Query: 291 VGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFDFYHRWFDAI 350
S SS+ +VL L++IMGMYFVSS+LLIR S+ +EYR IITEVL GE+QF+FYHRWFD I
Sbjct: 237 -SSKSSNVIVLLLAQIMGMYFVSSVLLIRMSMPLEYRTIITEVL-GELQFNFYHRWFDVI 294
Query: 351 FVASAFLSLLLLS-AHYTSRQADKHP 375
F+ SA S+L L AH + + P
Sbjct: 295 FLVSALSSILFLYLAHKQAPEKQMAP 320
>sp|Q54QM5|GPHR_DICDI Golgi pH regulator homolog OS=Dictyostelium discoideum GN=gpr89
PE=3 SV=1
Length = 547
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 160 QDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKM 219
DIK +E E++ LE+L++ LF +I+EL+ + +S T RG N LGY SIY
Sbjct: 336 DDIKQLEREIKQLEDLNRDLFTQIHELKLERLRIQFSTTLRGKFYNWLGYFFSIYW---K 392
Query: 220 IKSLQSVVFKEAGSVDPVTMTISIFLQFFDIGINAQLLSQYISLLFIGMLIVMSVRGFLM 279
KS ++VF G +DPVT + I L++F ++ SQ+IS + +G++ S+RGFL
Sbjct: 393 KKSALNIVFDRRGGMDPVTRGLDIALRYFHFQVDVTFWSQHISFILVGLMTASSIRGFLN 452
Query: 280 NVMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLA-IEYRIIITEVLGGEI 338
++K F S S SS+N+VL L+++MGMYF+SS+L++R S+ I R I+T++LG +I
Sbjct: 453 QILKVFHEYS--SSLSSNNIVLILAQVMGMYFISSVLMMRTSMPEIYTRFIVTQILG-DI 509
Query: 339 QFDFYHRWFDAIFVASAFLSLLLL 362
+F FYHRWFD IF+ SA ++ L L
Sbjct: 510 EFSFYHRWFDFIFIPSAIITTLAL 533
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 80/128 (62%)
Query: 1 MLPYYHCYLMLCNSGVRKERAALGAILFLLAFLYAFWRMGIHFPMPSPEKGFFTIPQLVS 60
+LPYY YL++ G K + +++ L+ +L FW++G FP+ G ++ +
Sbjct: 139 VLPYYQFYLLVLAYGFSKRKTLFFSLVLLVLYLILFWKIGDPFPILKEYTGLVSLEMGIG 198
Query: 61 RIGVIGVTVMAVLAGFGAVNLPYSYLSLFIREIDESEIKALERQLMQSIETCIAKKKKII 120
RIG++G TVM++L+G+GAV +PYSY++ F++ + + I LE+Q +++ KKK+++
Sbjct: 199 RIGIVGCTVMSLLSGYGAVYVPYSYITYFLKPVKDVTITKLEKQFNHALDKIFNKKKRVV 258
Query: 121 LCQMEMDR 128
L + E+ R
Sbjct: 259 LLKRELTR 266
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 36.6 bits (83), Expect = 0.29, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Query: 95 ESEIKALERQLMQSIETCIAKKKKI-ILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSV 153
ES+++AL Q+ + +++ IAK +KI + E+ R+QG +L+A K V + V
Sbjct: 1149 ESDMEALRNQISE-LQSTIAKLEKIKSTLEGEVARLQG---ELEAEQLAKSNVEKQKKKV 1204
Query: 154 QDDQKEQDIKIME--AEVQALEELSKQLFLEIYELR-QAKEA 192
+ D +++ ++ E A QAL++L K+L E+ E++ Q EA
Sbjct: 1205 ELDLEDKSAQLAEETAAKQALDKLKKKLEQELSEVQTQLSEA 1246
>sp|P85001|CE290_DANRE Centrosomal protein of 290 kDa OS=Danio rerio GN=cep290 PE=2 SV=1
Length = 2439
Score = 34.7 bits (78), Expect = 1.2, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 37/143 (25%)
Query: 89 FIREIDESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARS-------- 140
F+R+ EI+ LE L + K+K++ + EM + + S E+L R+
Sbjct: 109 FLRD----EIRQLESHLER-------KEKEVTQLEKEMGKERKSNEELALRAEEAEEKNR 157
Query: 141 FFKRIVGTVVRSVQDDQKEQDIKIMEAEVQALEEL----------------SKQLFLEIY 184
KR + + R +++Q +QDI+ E + E L ++QL+ +
Sbjct: 158 KLKREIKQLTR--KNEQLQQDIEFYRKEAEQRESLQTKEESNEIQRRLTKANQQLYQCME 215
Query: 185 ELRQAKEAAAYSRTWRGHMQNLL 207
EL+ A++ AA R+ H+Q L
Sbjct: 216 ELQHAEDMAANLRSENEHLQKNL 238
>sp|Q9R269|PEPL_MOUSE Periplakin OS=Mus musculus GN=Ppl PE=1 SV=1
Length = 1755
Score = 34.7 bits (78), Expect = 1.3, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 95 ESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARS---FFKRIVGTVVR 151
ESE+ L +L++ +++K + ++ Q E L+ R K + V++
Sbjct: 1183 ESEVANLRLELVE-------QERKFRGAEEQLKSYQSELEALRNRGPQVEVKEVTKEVIK 1235
Query: 152 SVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEA 192
D + EQ+++ + E+ L ++ LEIY+L+Q +A
Sbjct: 1236 YTTDPETEQELQRLREEIMDKTRLIERCDLEIYQLKQEIQA 1276
>sp|P56154|PGK_HELPY Phosphoglycerate kinase OS=Helicobacter pylori (strain ATCC 700392
/ 26695) GN=pgk PE=3 SV=1
Length = 402
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 103 RQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRI 145
R+ + +I+ CI K K I+ + R +G EEKL + F KR+
Sbjct: 47 RESLPTIQYCIDNKAKDIILVSHLGRPKGVEEKLSLKPFLKRL 89
>sp|Q9ZJP1|PGK_HELPJ Phosphoglycerate kinase OS=Helicobacter pylori (strain J99) GN=pgk
PE=3 SV=1
Length = 402
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 103 RQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRI 145
R+ + +I+ CI K K I+ + R +G EEKL + F KR+
Sbjct: 47 RESLPTIQFCIDNKAKDIILVSHLGRPKGVEEKLSLKPFLKRL 89
>sp|Q66GS9|CP135_HUMAN Centrosomal protein of 135 kDa OS=Homo sapiens GN=CEP135 PE=1 SV=2
Length = 1140
Score = 33.9 bits (76), Expect = 2.2, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
Query: 91 REIDESEIKALERQL--MQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGT 148
+E+ E++ K ++R+L MQ +E +AK Q+E++ Q +E+L K + T
Sbjct: 342 KELGEAK-KEIKRKLSEMQDLEETMAK------LQLELNLCQKEKERLSDELLVKSDLET 394
Query: 149 VVRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELR 187
VV + EQ+ + + +V++ +QL LE+ +R
Sbjct: 395 VVHQL-----EQEKQRLSKKVESFAVTERQLTLEVERMR 428
>sp|Q9HJ36|PFDB_THEAC Prefoldin subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pfdB PE=3 SV=1
Length = 124
Score = 33.5 bits (75), Expect = 2.6, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 103 RQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD-----DQ 157
++L ++IE ++ ++ L EM + KL + R VG+++ VQD D+
Sbjct: 18 QELEENIEKLATQRYQLDLSLKEMQKTLDELNKLDDNTPIYRTVGSILYRVQDKKKLVDE 77
Query: 158 KEQDIKIMEAEVQALEELSKQLFLEIYELRQA 189
++ I++ + + LE+ K L + EL+ A
Sbjct: 78 LDEQIELTKIRLSTLEKQQKSLEEKYKELQNA 109
>sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2
Length = 2701
Score = 33.5 bits (75), Expect = 3.0, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 94 DESEIKALERQLMQSIETCIAKKKKIILCQMEM----DRIQGSEEKLKARSFFKRIVGTV 149
++ E++ L +L + E +K I + E+ DR+ EEKLK +S +
Sbjct: 1083 NQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQ 1142
Query: 150 VRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEA 192
+ +VQ++ E KI E E E +K+L LE E + + A
Sbjct: 1143 LLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELA 1185
>sp|P38799|YHN8_YEAST Uncharacterized protein YHR078W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YHR078W PE=4 SV=1
Length = 552
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 152/367 (41%), Gaps = 100/367 (27%)
Query: 57 QLVSRIGVIGVTVMAVLAGFGAVN-LPYSYLSLF--IREIDESE--------IKALERQL 105
+++R+ + GVTVMA L+G V+ L Y++L ++ R S+ + L
Sbjct: 188 NILTRLSIGGVTVMASLSGLATVSSLYYNFLVIWHKFRNTPMSDPSFRNINNSNNNSKSL 247
Query: 106 MQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQDDQKEQDIKIM 165
+ + + I +K IQ E ++ ++RS++++ E
Sbjct: 248 LWTTDAYIEEK------------IQDYEHNIEQNV-------QILRSLEEEVGENST--F 286
Query: 166 EAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYALSIYCVYKMI----K 221
+AE L E LE+ +L + + RT++ + +G+ IYC++K+I K
Sbjct: 287 KAE---LMEKIAWYQLELGKLEALLQQSPQVRTFKKAFE--VGFI--IYCLHKLIITFLK 339
Query: 222 SLQSVV--------------FKEAGSVDPVTMTISIFLQF----FDIGINAQLLSQYISL 263
+ ++ F E + DP+ +TI+ L F F+ + L++ ISL
Sbjct: 340 RIPYIIYHSLKYPDDYDYENFSENAASDPLAITIANILDFSFFRFNYQHDLDSLTKQISL 399
Query: 264 -----LFIGML-IVMSVRGFLMNVMKFFF---AVSRVGSGSSSNVV-------------- 300
LF+ L V + +++ ++ F A+ + + ++NV+
Sbjct: 400 FLSISLFLCCLSAVNTTISYVVTLLPIKFQILALFAMQNDDTANVLPEYTNNSSYKGKKR 459
Query: 301 --------------LFLSEIMGMYFVSSILLIRKSLAIEYRIIITEVLGGEIQFD--FYH 344
L +SE+ G+Y +++ L++R L E + E+LGG+
Sbjct: 460 NYSQEQKGISLIKNLVVSELTGVYVLATTLMVRSHLPFEVSQRLKELLGGKFTVPNIVID 519
Query: 345 RWFDAIF 351
WFD ++
Sbjct: 520 SWFDEVY 526
>sp|P97690|SMC3_RAT Structural maintenance of chromosomes protein 3 OS=Rattus
norvegicus GN=Smc3 PE=1 SV=1
Length = 1191
Score = 32.3 bits (72), Expect = 6.1, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 91 REIDESEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVV 150
R+ SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT +
Sbjct: 732 RDSTLSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDL 785
Query: 151 RSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYEL 186
S + ++ + + E++ L++ ++QL E +L
Sbjct: 786 PSQLSLEDQKRVDALNDEIRQLQQKNRQLLNERIKL 821
>sp|Q24702|DVA1_DICVI DVA-1 polyprotein OS=Dictyocaulus viviparus GN=DVA-1 PE=1 SV=1
Length = 1557
Score = 32.0 bits (71), Expect = 7.6, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 85 YLSLFIREIDESEIKAL-ERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFK 143
YL+ ++ E ++EIK L E+ Q+I KKI ME + ++K KAR K
Sbjct: 1427 YLT-WLNEEQKAEIKQLKEKDEKQTI------GKKI----MEFFELTSGDDKEKAREQLK 1475
Query: 144 RIVGTVVRSVQDDQKEQDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAYSRTWRGHM 203
V+ ++K ++K ++ +LEE+SK++ E E + + A +R +
Sbjct: 1476 AACKHYVKMYVGEEKAAELKKLKDSGISLEEMSKKV-TETIETIEDEAVRAKARRIHSYC 1534
Query: 204 QNLLG 208
Q + G
Sbjct: 1535 QRIFG 1539
>sp|Q5R4K5|SMC3_PONAB Structural maintenance of chromosomes protein 3 OS=Pongo abelii
GN=SMC3 PE=2 SV=1
Length = 1217
Score = 32.0 bits (71), Expect = 8.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 96 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 155
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 156 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 186
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
>sp|Q9UQE7|SMC3_HUMAN Structural maintenance of chromosomes protein 3 OS=Homo sapiens
GN=SMC3 PE=1 SV=2
Length = 1217
Score = 32.0 bits (71), Expect = 8.5, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 96 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 155
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 156 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 186
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
>sp|Q9CW03|SMC3_MOUSE Structural maintenance of chromosomes protein 3 OS=Mus musculus
GN=Smc3 PE=1 SV=2
Length = 1217
Score = 32.0 bits (71), Expect = 8.7, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 96 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 155
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 156 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 186
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
>sp|O97594|SMC3_BOVIN Structural maintenance of chromosomes protein 3 OS=Bos taurus
GN=SMC3 PE=1 SV=1
Length = 1218
Score = 31.6 bits (70), Expect = 9.4, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 96 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 155
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 156 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 186
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
>sp|O93309|SMC3_XENLA Structural maintenance of chromosomes protein 3 OS=Xenopus laevis
GN=smc3 PE=1 SV=2
Length = 1209
Score = 31.6 bits (70), Expect = 9.6, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 96 SEIKALERQLMQSIETCIAKKKKIILCQMEMDRIQGSEEKLKARSFFKRIVGTVVRSVQD 155
SE+K L+ + QS +T + K++ + + + ++ + E LKA +GT + S
Sbjct: 737 SEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE------LGTDLLSQLS 790
Query: 156 DQKEQDIKIMEAEVQALEELSKQLFLEIYEL 186
+ ++ + + E++ L++ ++QL E +L
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKL 821
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.141 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,851,853
Number of Sequences: 539616
Number of extensions: 4345253
Number of successful extensions: 17706
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 17634
Number of HSP's gapped (non-prelim): 69
length of query: 377
length of database: 191,569,459
effective HSP length: 119
effective length of query: 258
effective length of database: 127,355,155
effective search space: 32857629990
effective search space used: 32857629990
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)