Query 017121
Match_columns 377
No_of_seqs 151 out of 167
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 09:17:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017121.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017121hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxka_ a.2.5.1 (A:) Prefoldin 36.4 73 0.0053 23.2 9.7 32 160-191 72-103 (107)
2 d1gqea_ e.38.1.1 (A:) Polypept 30.3 1.7E+02 0.013 26.0 11.1 33 96-128 6-40 (362)
3 d2azeb1 e.63.1.2 (B:201-301) T 28.1 48 0.0035 24.7 5.5 30 162-191 3-32 (101)
4 d2hgsa4 d.142.1.6 (A:3-201,A:3 20.7 2.7 0.0002 39.3 -4.0 32 53-84 313-369 (370)
5 d2azeb1 e.63.1.2 (B:201-301) T 17.4 93 0.0067 22.9 5.1 36 160-195 8-43 (101)
6 d1nkpa_ a.38.1.1 (A:) Myc prot 14.9 1.5E+02 0.011 20.6 5.6 32 160-191 52-83 (88)
7 d1nlwa_ a.38.1.1 (A:) Mad prot 14.6 1.5E+02 0.011 20.1 5.4 32 160-191 47-78 (79)
8 d1ydxa2 d.287.1.2 (A:194-374) 13.1 87 0.0063 23.7 4.2 15 165-179 158-172 (181)
9 d2axtj1 f.23.32.1 (J:7-40) Pho 13.0 28 0.002 21.0 0.7 22 57-78 11-32 (34)
10 d1eysh2 f.23.10.1 (H:7-43) Pho 11.9 72 0.0052 19.5 2.4 13 24-36 6-18 (37)
No 1
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=36.38 E-value=73 Score=23.23 Aligned_cols=32 Identities=6% Similarity=0.282 Sum_probs=20.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017121 160 QDIKIMEAEVQALEELSKQLFLEIYELRQAKE 191 (377)
Q Consensus 160 ~~i~~L~~EI~~Le~l~~~L~~el~~L~~~~~ 191 (377)
..+..++.+|+.|+.-...+-.++.+++...+
T Consensus 72 ~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 72 EKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666777777766666666666665443
No 2
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=30.32 E-value=1.7e+02 Score=26.01 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhHHH--HHHHHHHHHHHHHhhhhh
Q 017121 96 SEIKALERQLMQSIE--TCIAKKKKIILCQMEMDR 128 (377)
Q Consensus 96 ~dI~~~e~~l~~t~~--~l~~Kk~rl~~~~~~~~~ 128 (377)
.+|+.+.+++..... .+..||+|+..++.+++.
T Consensus 6 ~~i~eL~~rl~~Lr~~fDld~kk~Rl~ELE~~lsd 40 (362)
T d1gqea_ 6 NRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQ 40 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcC
Confidence 457777777666554 467788999999877653
No 3
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.07 E-value=48 Score=24.66 Aligned_cols=30 Identities=13% Similarity=0.102 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017121 162 IKIMEAEVQALEELSKQLFLEIYELRQAKE 191 (377)
Q Consensus 162 i~~L~~EI~~Le~l~~~L~~el~~L~~~~~ 191 (377)
+..|++|++.|+..++.|=.-+..+.+..+
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~ 32 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLR 32 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777766666554444444333
No 4
>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.71 E-value=2.7 Score=39.27 Aligned_cols=32 Identities=34% Similarity=0.588 Sum_probs=26.9
Q ss_pred cchhchhhceehhhHHH-------------------------HHHhhcccccccccc
Q 017121 53 FTIPQLVSRIGVIGVTV-------------------------MAVLAGFGAVNLPYS 84 (377)
Q Consensus 53 ~~~e~~l~RvgViGVt~-------------------------mA~LSGfGAVs~Py~ 84 (377)
...+++|+.+||-|+.+ .++-+|||++.+||=
T Consensus 313 ~~~~~~iSElGifG~~l~~~~~~~~N~~~G~LlRTK~~~~~EGGVaaG~g~lDSpyl 369 (370)
T d2hgsa4 313 ARVVQCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNPYP 369 (370)
T ss_dssp CEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEETTCSSCCTTTTSCEEECCEE
T ss_pred eeeccccccccccEEEEeCCCEEEEeccceEEEecCCCCCCCCCeecceecccCccc
Confidence 34678999999999875 578899999999983
No 5
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.44 E-value=93 Score=22.92 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=30.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017121 160 QDIKIMEAEVQALEELSKQLFLEIYELRQAKEAAAY 195 (377)
Q Consensus 160 ~~i~~L~~EI~~Le~l~~~L~~el~~L~~~~~~~~~ 195 (377)
+|+..|++|-+.|..+.+.+-.+|.++....+..++
T Consensus 8 ~El~~L~~~E~~LD~li~~~~~~L~~lted~~n~k~ 43 (101)
T d2azeb1 8 QDLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQRL 43 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhccC
Confidence 688999999999999999999999998876665554
No 6
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.88 E-value=1.5e+02 Score=20.60 Aligned_cols=32 Identities=25% Similarity=0.099 Sum_probs=23.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017121 160 QDIKIMEAEVQALEELSKQLFLEIYELRQAKE 191 (377)
Q Consensus 160 ~~i~~L~~EI~~Le~l~~~L~~el~~L~~~~~ 191 (377)
+.|+.|+.+++.|+.-..+|-.+...|..+.+
T Consensus 52 ~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~ 83 (88)
T d1nkpa_ 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLE 83 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888888888887777777777766666554
No 7
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.63 E-value=1.5e+02 Score=20.15 Aligned_cols=32 Identities=25% Similarity=0.153 Sum_probs=25.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017121 160 QDIKIMEAEVQALEELSKQLFLEIYELRQAKE 191 (377)
Q Consensus 160 ~~i~~L~~EI~~Le~l~~~L~~el~~L~~~~~ 191 (377)
+.|+.|+.++..++.-..+|..+..+|+.+.+
T Consensus 47 ~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l~ 78 (79)
T d1nlwa_ 47 LHIKKLEDSDRKAVHQIDQLQREQRHLKRQLE 78 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67888888888888888888878777776543
No 8
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=13.11 E-value=87 Score=23.69 Aligned_cols=15 Identities=20% Similarity=0.366 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHHH
Q 017121 165 MEAEVQALEELSKQL 179 (377)
Q Consensus 165 L~~EI~~Le~l~~~L 179 (377)
++++++.|+++++.|
T Consensus 158 ~~~~i~~l~~lk~~L 172 (181)
T d1ydxa2 158 YKKELSSLTVIRDTL 172 (181)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 9
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=12.99 E-value=28 Score=20.96 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=17.9
Q ss_pred chhhceehhhHHHHHHhhcccc
Q 017121 57 QLVSRIGVIGVTVMAVLAGFGA 78 (377)
Q Consensus 57 ~~l~RvgViGVt~mA~LSGfGA 78 (377)
..+.-|+|+|+..-+.-||.|+
T Consensus 11 ~G~~vi~~vG~FfYGsYsGlGS 32 (34)
T d2axtj1 11 AGMGVIVIVGLFFYGAYAGLGS 32 (34)
T ss_dssp HHHHHHHHHHHHHHHTTTSTTS
T ss_pred hhhhhHhheeeeeeeeeccccc
Confidence 4566788888899898999886
No 10
>d1eysh2 f.23.10.1 (H:7-43) Photosystem II reaction centre subunit H, transmembrane region {Thermochromatium tepidum [TaxId: 1050]}
Probab=11.89 E-value=72 Score=19.47 Aligned_cols=13 Identities=23% Similarity=0.442 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHH
Q 017121 24 GAILFLLAFLYAF 36 (377)
Q Consensus 24 ~~~~~~~~~l~~F 36 (377)
.++++|+.|+|++
T Consensus 6 Aql~ly~Fw~FFa 18 (37)
T d1eysh2 6 AQITIWAFWLFFF 18 (37)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4567777777765
Done!