Query 017124
Match_columns 377
No_of_seqs 145 out of 1394
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 09:19:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017124.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017124hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.3E-80 4.3E-85 596.3 24.8 370 5-377 3-422 (427)
2 3qb0_A Actin-related protein 4 100.0 6E-78 2.1E-82 582.5 29.2 366 3-377 19-498 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 2.2E-76 7.4E-81 562.6 32.8 374 4-377 2-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 1.5E-75 5.1E-80 559.6 16.5 372 3-374 2-388 (394)
5 4fo0_A Actin-related protein 8 100.0 2.1E-71 7.3E-76 559.0 23.4 370 7-377 15-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 3.6E-70 1.2E-74 527.6 30.0 370 5-376 3-412 (418)
7 4am6_A Actin-like protein ARP8 100.0 2.3E-58 8E-63 448.3 28.3 362 5-377 38-652 (655)
8 1jce_A ROD shape-determining p 100.0 1.3E-36 4.5E-41 285.8 19.4 307 8-355 4-330 (344)
9 2v7y_A Chaperone protein DNAK; 99.9 1.1E-26 3.9E-31 228.6 7.0 297 8-351 3-350 (509)
10 3h1q_A Ethanolamine utilizatio 99.9 4.6E-24 1.6E-28 193.6 16.8 244 7-349 28-272 (272)
11 1dkg_D Molecular chaperone DNA 99.9 8.1E-25 2.8E-29 208.3 11.2 304 8-351 3-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.9 2E-24 7E-29 206.3 12.1 301 7-351 18-392 (394)
13 3i33_A Heat shock-related 70 k 99.9 2.5E-23 8.4E-28 199.5 9.6 218 102-351 158-400 (404)
14 2kho_A Heat shock protein 70; 99.9 2.1E-21 7.2E-26 194.4 13.7 298 8-351 3-381 (605)
15 1yuw_A Heat shock cognate 71 k 99.8 6E-21 2E-25 189.4 14.3 215 103-351 140-379 (554)
16 3d2f_A Heat shock protein homo 99.8 6.3E-21 2.2E-25 192.6 11.5 213 103-351 139-382 (675)
17 4gni_A Putative heat shock pro 99.8 3.7E-21 1.3E-25 184.6 6.5 237 83-352 130-401 (409)
18 4b9q_A Chaperone protein DNAK; 99.8 2.1E-19 7.1E-24 180.0 8.3 300 8-351 3-381 (605)
19 2fsj_A Hypothetical protein TA 99.8 1.3E-18 4.6E-23 162.7 10.4 179 8-198 22-240 (346)
20 2ych_A Competence protein PILM 99.8 6E-18 2.1E-22 160.5 13.9 171 119-320 154-331 (377)
21 4a2a_A Cell division protein F 99.7 2.7E-16 9.1E-21 150.4 15.9 199 116-352 168-394 (419)
22 2zgy_A Plasmid segregation pro 99.6 8.6E-15 2.9E-19 135.5 10.0 288 9-350 2-320 (320)
23 4apw_A ALP12; actin-like prote 99.5 8.2E-15 2.8E-19 135.9 5.0 285 4-351 4-324 (329)
24 3js6_A Uncharacterized PARM pr 99.4 9.6E-14 3.3E-18 129.9 7.9 185 8-198 5-232 (355)
25 2d0o_A DIOL dehydratase-reacti 99.0 1.2E-09 4E-14 104.1 9.2 199 118-349 370-602 (610)
26 1nbw_A Glycerol dehydratase re 99.0 6.1E-10 2.1E-14 106.3 6.7 180 138-348 392-603 (607)
27 4ehu_A Activator of 2-hydroxyi 98.6 5.5E-08 1.9E-12 87.6 8.1 169 133-350 73-253 (276)
28 1hux_A Activator of (R)-2-hydr 97.8 7.3E-05 2.5E-09 66.8 8.8 47 297-351 210-256 (270)
29 1t6c_A Exopolyphosphatase; alp 97.0 0.0015 5E-08 59.6 7.2 73 117-192 98-178 (315)
30 2gup_A ROK family protein; sug 96.8 0.005 1.7E-07 55.3 9.5 51 121-174 87-142 (292)
31 2ews_A Pantothenate kinase; PA 96.4 0.019 6.4E-07 51.3 10.2 51 295-350 236-287 (287)
32 3cer_A Possible exopolyphospha 96.3 0.0015 5.2E-08 60.2 2.5 73 118-191 104-191 (343)
33 3vgl_A Glucokinase; ROK family 96.3 0.06 2E-06 48.9 13.1 46 127-174 94-146 (321)
34 4db3_A Glcnac kinase, N-acetyl 96.3 0.047 1.6E-06 49.8 12.3 52 298-349 272-324 (327)
35 3r8e_A Hypothetical sugar kina 96.1 0.054 1.8E-06 49.2 11.8 46 127-174 115-168 (321)
36 4htl_A Beta-glucoside kinase; 96.0 0.25 8.5E-06 44.2 15.8 51 298-350 240-290 (297)
37 3hi0_A Putative exopolyphospha 95.9 0.036 1.2E-06 53.8 10.2 70 118-190 102-178 (508)
38 1u6z_A Exopolyphosphatase; alp 95.8 0.024 8.4E-07 55.1 8.5 71 118-191 98-176 (513)
39 3mdq_A Exopolyphosphatase; str 95.8 0.0046 1.6E-07 56.3 3.1 70 119-191 92-170 (315)
40 3vov_A Glucokinase, hexokinase 95.8 0.1 3.5E-06 47.0 12.1 53 298-350 240-294 (302)
41 2qm1_A Glucokinase; alpha-beta 95.5 0.041 1.4E-06 50.0 8.5 46 127-174 106-158 (326)
42 2aa4_A Mannac kinase, putative 95.4 0.068 2.3E-06 47.6 9.6 51 298-349 236-286 (289)
43 2i7n_A Pantothenate kinase 1; 95.2 0.051 1.7E-06 50.0 8.0 56 292-349 302-358 (360)
44 2hoe_A N-acetylglucosamine kin 94.3 0.26 8.9E-06 45.8 10.6 46 127-174 186-236 (380)
45 3djc_A Type III pantothenate k 94.1 0.42 1.5E-05 42.0 10.8 19 9-27 4-22 (266)
46 2yhw_A Bifunctional UDP-N-acet 94.0 0.23 7.8E-06 45.4 9.4 46 127-174 129-181 (343)
47 3cet_A Conserved archaeal prot 93.5 0.043 1.5E-06 49.6 3.3 25 150-174 127-151 (334)
48 1z6r_A MLC protein; transcript 92.7 1.1 3.9E-05 41.8 12.1 46 127-174 184-236 (406)
49 2h3g_X Biosynthetic protein; p 91.8 1 3.5E-05 39.6 9.9 19 9-27 2-20 (268)
50 3bex_A Type III pantothenate k 90.3 0.83 2.8E-05 39.7 7.7 19 9-27 5-23 (249)
51 3zx3_A Ectonucleoside triphosp 89.2 1.2 4.1E-05 42.2 8.4 89 82-171 89-202 (452)
52 1zbs_A Hypothetical protein PG 88.0 3.7 0.00013 36.3 10.5 69 104-173 62-132 (291)
53 1zc6_A Probable N-acetylglucos 82.2 14 0.00047 32.7 11.5 89 81-173 53-145 (305)
54 2e2o_A Hexokinase; acetate and 76.9 14 0.00047 32.5 9.7 55 104-160 62-117 (299)
55 2ch5_A NAGK protein; transfera 76.3 15 0.00052 33.0 10.0 90 81-171 49-142 (347)
56 2ap1_A Putative regulator prot 73.7 7.9 0.00027 34.6 7.2 46 127-174 118-170 (327)
57 3mcp_A Glucokinase; structural 69.7 38 0.0013 30.9 10.9 51 123-175 102-172 (366)
58 3aap_A Ectonucleoside triphosp 65.3 4 0.00014 37.3 3.3 35 150-184 140-176 (353)
59 1woq_A Inorganic polyphosphate 64.8 66 0.0023 27.5 11.6 51 123-175 108-166 (267)
60 1saz_A Probable butyrate kinas 62.8 41 0.0014 30.8 9.8 51 297-351 297-348 (381)
61 1zxo_A Conserved hypothetical 60.7 6.5 0.00022 34.6 3.8 53 121-173 76-130 (291)
62 2f9w_A Pantothenate kinase; CO 51.8 39 0.0013 29.4 7.1 17 9-25 25-41 (271)
63 3epq_A Putative fructokinase; 48.8 11 0.00038 33.4 3.2 50 124-175 92-148 (302)
64 3htv_A D-allose kinase, alloki 45.0 17 0.00058 32.3 3.8 61 298-358 242-306 (310)
65 2yhx_A Hexokinase B; transfera 41.9 19 0.00065 34.1 3.8 51 298-351 386-442 (457)
66 1saz_A Probable butyrate kinas 39.6 19 0.00063 33.2 3.3 53 120-174 111-199 (381)
67 2ap1_A Putative regulator prot 35.3 8.7 0.0003 34.4 0.3 67 276-349 257-324 (327)
68 3eno_A Putative O-sialoglycopr 34.7 21 0.00073 32.1 2.8 27 296-322 250-276 (334)
69 2e2o_A Hexokinase; acetate and 33.3 13 0.00044 32.7 1.1 45 298-350 242-286 (299)
70 3cj1_A Ectonucleoside triphosp 32.1 35 0.0012 32.2 3.9 22 150-171 190-211 (456)
71 2itm_A Xylulose kinase, xylulo 31.3 25 0.00084 33.4 2.7 48 296-351 387-434 (484)
72 3qbx_A Anhydro-N-acetylmuramic 30.3 14 0.00049 33.7 0.8 23 297-319 285-307 (371)
73 3djc_A Type III pantothenate k 30.0 89 0.003 27.0 5.9 49 152-200 4-53 (266)
74 2q2r_A Glucokinase 1, putative 29.8 13 0.00043 34.1 0.4 53 121-174 119-205 (373)
75 1cza_N Hexokinase type I; stru 28.8 20 0.00068 37.2 1.7 51 297-351 408-459 (917)
76 2ch5_A NAGK protein; transfera 28.7 30 0.001 30.9 2.8 50 298-350 268-323 (347)
77 3cqy_A Anhydro-N-acetylmuramic 27.5 16 0.00054 33.5 0.6 23 297-319 291-313 (370)
78 1bdg_A Hexokinase; phosphotran 27.1 35 0.0012 32.2 2.9 50 299-351 396-446 (451)
79 2zf5_O Glycerol kinase; hypert 26.0 56 0.0019 31.0 4.2 47 296-351 394-440 (497)
80 3ifr_A Carbohydrate kinase, FG 25.4 29 0.001 33.2 2.1 47 296-351 401-447 (508)
81 4g9i_A Hydrogenase maturation 25.4 23 0.0008 35.9 1.4 26 296-321 706-731 (772)
82 4e1j_A Glycerol kinase; struct 24.1 37 0.0013 32.6 2.5 47 296-351 426-472 (520)
83 2ivn_A O-sialoglycoprotein end 22.8 28 0.00096 31.2 1.3 47 296-347 245-294 (330)
84 2dpn_A Glycerol kinase; thermu 22.6 46 0.0016 31.6 2.9 46 297-351 400-445 (495)
85 3vgl_A Glucokinase; ROK family 22.4 1.5E+02 0.005 26.0 6.1 53 298-350 255-311 (321)
86 3h6e_A Carbohydrate kinase, FG 22.0 45 0.0015 31.7 2.6 48 297-352 389-436 (482)
87 2w40_A Glycerol kinase, putati 21.9 75 0.0026 30.2 4.2 46 297-351 409-454 (503)
88 4e1j_A Glycerol kinase; struct 20.6 84 0.0029 30.0 4.3 32 130-161 257-290 (520)
89 2yrb_A Protein fantom; beta sa 20.0 42 0.0014 26.5 1.6 66 130-198 23-89 (156)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-80 Score=596.32 Aligned_cols=370 Identities=37% Similarity=0.677 Sum_probs=321.9
Q ss_pred CCCCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCC----------------------CccccCCCccceecccccc
Q 017124 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT----------------------GVMVGMGQKDAYVGDEAQS 62 (377)
Q Consensus 5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~----------------------~~~~~~~~~~~~vg~~~~~ 62 (377)
.+.++||||+||+++|+||+|++.|++++||+++++++. ..+.+..+.+++||+++..
T Consensus 3 ~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~ 82 (427)
T 3dwl_A 3 SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALK 82 (427)
T ss_dssp CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHH
T ss_pred CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhh
Confidence 367899999999999999999999999999999998753 1122445668899999987
Q ss_pred ccc-cceeeceecCCccCCHHHHHHHHHHhhcccccCCCCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhh
Q 017124 63 KRG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAV 141 (377)
Q Consensus 63 ~~~-~~~~~~p~~~g~i~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~ 141 (377)
... ...+++|+++|.|.|||.+|++|+|+|++.|++++.++|+++++|++++...|+.+++++||.++++++++..+++
T Consensus 83 ~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~v 162 (427)
T 3dwl_A 83 KASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAV 162 (427)
T ss_dssp THHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHH
T ss_pred CcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHH
Confidence 765 6789999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcC--------CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCCCCcchhHHHHHHH
Q 017124 142 LSLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRD 213 (377)
Q Consensus 142 ~a~~~~g--------~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ 213 (377)
+|+|++| .++|+|||+|+++|+|+||++|+++.++..++++||++++++|.++|.+++.. ..+.+.+++
T Consensus 163 la~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~ 239 (427)
T 3dwl_A 163 LALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAER 239 (427)
T ss_dssp HHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHH
T ss_pred HHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHH
Confidence 9999998 68999999999999999999999999999999999999999999999877665 446688999
Q ss_pred HHHhcceeecCHHHHHHHhccCCCcceeEEc--CCCc--EEeeCCccccccccCCCCccCCCC-CCChHHHHHHHHhcCC
Q 017124 214 MKEKLAYVALDYEQELEAAKSSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCD 288 (377)
Q Consensus 214 ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~i~v~~~~~~~~e~lf~p~~~~~~-~~~l~~~I~~~i~~~~ 288 (377)
+|+++||++.|++++++...........|.+ |+|. .+.++.+||+++|+||+|++++.+ ..+|+++|.++|.+||
T Consensus 240 IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~ 319 (427)
T 3dwl_A 240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSP 319 (427)
T ss_dssp HHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSC
T ss_pred HHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCC
Confidence 9999999999998887765433333456667 7887 889999999999999999999988 4899999999999999
Q ss_pred hhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcC--------------CCCceEEEECCCCCccccchhhhhhhccccc
Q 017124 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSREITALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTF 354 (377)
Q Consensus 289 ~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~--------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~ 354 (377)
+|+|+.|++|||||||+|++|||.+||++||+.+. |...+++|..++++.+++|+|||++|++++|
T Consensus 320 ~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f 399 (427)
T 3dwl_A 320 IDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEF 399 (427)
T ss_dssp HHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTH
T ss_pred HHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccch
Confidence 99999999999999999999999999999999887 4566799999999999999999999999999
Q ss_pred ccccccHHHHhhcCCcccccccC
Q 017124 355 QQMWISKGEYDESGPAIVHRKCF 377 (377)
Q Consensus 355 ~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
+++||||+||+|+|++|++||++
T Consensus 400 ~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 400 GSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHHSEEHHHHHHSCGGGGSCCCC
T ss_pred hheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999974
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-78 Score=582.48 Aligned_cols=366 Identities=31% Similarity=0.569 Sum_probs=330.6
Q ss_pred CCCCCCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCccccCCCccceeccc-cccccccceeeceecCCccCCH
Q 017124 3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE-AQSKRGILTLKYPIEHGIVSNW 81 (377)
Q Consensus 3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~~~~~~~~p~~~g~i~d~ 81 (377)
.+++.++||||+||+++|+||+|++.|++++||+++++++.. .++.+||++ +...++...+++|+++|.|.||
T Consensus 19 ggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw 92 (498)
T 3qb0_A 19 GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW 92 (498)
T ss_dssp CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred CCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence 467889999999999999999999999999999999987542 456789997 5555677889999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCCC-cEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCceEEEEeCCCC
Q 017124 82 DDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160 (377)
Q Consensus 82 ~~~~~~~~~~~~~~L~~~~~~~-~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~ 160 (377)
|.++.+|+|+|.+.|++++.++ ||++++|++++...|+.+++++||.+++++++++.+++||+|++|.++|+|||+|++
T Consensus 93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g 172 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD 172 (498)
T ss_dssp HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence 9999999999988899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHc------------------CCCCcch------h-HHHHHHHHH
Q 017124 161 VSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER------------------GYSFTTT------A-EREIVRDMK 215 (377)
Q Consensus 161 ~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~ik 215 (377)
.|+|+||++|+++.++..++++||++++++|.++|.++ ++.+... . +.+.++++|
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999754 2333221 2 445899999
Q ss_pred HhcceeecC--HHHHHHHhccCCCcceeEEcCCCcEEeeCCc-cccccccCCCCccCCC---------------------
Q 017124 216 EKLAYVALD--YEQELEAAKSSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSLIGM--------------------- 271 (377)
Q Consensus 216 ~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~-~~~~~e~lf~p~~~~~--------------------- 271 (377)
+++|||+.+ ++++... ......+.|++|||+.|.++.+ ||.+||.||+|++++.
T Consensus 253 E~~c~Va~~~~~~~~~~~--~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~ 330 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKTE--LSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP 330 (498)
T ss_dssp HHTCCCCSSCHHHHHHHH--HHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred HhhEEecCCccHhHHhhh--ccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence 999999987 4443222 1234578999999999999999 9999999999987643
Q ss_pred -----------------------------------------------------------CCCChHHHHHHHHhcCChhHH
Q 017124 272 -----------------------------------------------------------EAAGIHETTYNSIMKCDVDIR 292 (377)
Q Consensus 272 -----------------------------------------------------------~~~~l~~~I~~~i~~~~~~~~ 292 (377)
+..||+++|.++|.+||.|+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r 410 (498)
T 3qb0_A 331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR 410 (498)
T ss_dssp CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence 567899999999999999999
Q ss_pred HHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECC---CCCccccchhhhhhhcccccccccccHHHHhhcCC
Q 017124 293 KDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 369 (377)
Q Consensus 293 ~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~ 369 (377)
+.|++||||+||+|++|||.+||++||+.+.| ..+++|+.+ +++.+++|+|||++|++.+|+++||||+||+|+|+
T Consensus 411 ~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~ 489 (498)
T 3qb0_A 411 ATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGV 489 (498)
T ss_dssp HHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred HHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCc
Confidence 99999999999999999999999999999999 789999988 78999999999999999999999999999999999
Q ss_pred -cccccccC
Q 017124 370 -AIVHRKCF 377 (377)
Q Consensus 370 -~~~~~k~~ 377 (377)
.||+|||.
T Consensus 490 ~~iv~~kc~ 498 (498)
T 3qb0_A 490 ERLLNDRFR 498 (498)
T ss_dssp HHHHHHTTC
T ss_pred HhhccccCc
Confidence 89999993
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=2.2e-76 Score=562.61 Aligned_cols=374 Identities=87% Similarity=1.393 Sum_probs=342.3
Q ss_pred CCCCCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCccccCCCccceeccccccccccceeeceecCCccCCHHH
Q 017124 4 AEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~ 83 (377)
+++.++||||+||+++|+||++++.|+.++||+++++++.....+.+.++++||+++....+...+++|+++|.|.||+.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~ 81 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD 81 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence 46789999999999999999999999999999999988766555555677899999988877789999999999999999
Q ss_pred HHHHHHHhhcccccCCCCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCceEEEEeCCCCceE
Q 017124 84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 163 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~ 163 (377)
++.+|+++|++.|++++.++++++++|++++..+|+.+++++||.+|+++++++++|+||+|++|.++++|||+|+++|+
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCCCCcchhHHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEE
Q 017124 164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYE 243 (377)
Q Consensus 164 v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (377)
|+||++|+++.++..++++||++++++|.++|.++++++....+.+.++++|+++|++..++.++++...........|.
T Consensus 162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 241 (375)
T 2fxu_A 162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 241 (375)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence 99999999998888899999999999999999988888876677889999999999999998877766554455678999
Q ss_pred cCCCcEEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcC
Q 017124 244 LPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALA 323 (377)
Q Consensus 244 ~~~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~ 323 (377)
+|||+.+.++.+||.++|.||+|++++.+..+|.++|.++|.+||.++|+.+++||+||||+|++|||.+||+++|..+.
T Consensus 242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~ 321 (375)
T 2fxu_A 242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA 321 (375)
T ss_dssp CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017124 324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKCF 377 (377)
Q Consensus 324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
|...+++++.+++|.+++|+||+++|++.+|+++||||+||+|+|+++++||||
T Consensus 322 p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp CTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 988889999999999999999999999999999999999999999999999997
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=1.5e-75 Score=559.59 Aligned_cols=372 Identities=48% Similarity=0.892 Sum_probs=164.5
Q ss_pred CCCCCCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCcc-c-cCCCccceeccccccccccceeeceecCCccCC
Q 017124 3 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM-V-GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (377)
Q Consensus 3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~-~-~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d 80 (377)
...+.++||||+||+++|+||+|++.|++++||+++++++.... . +...+++++|+++....+...+++|+++|.|.|
T Consensus 2 ~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~d 81 (394)
T 1k8k_B 2 DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRN 81 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEec
Confidence 35577899999999999999999999999999999988765432 1 233467899999988877788999999999999
Q ss_pred HHHHHHHHHHhh-cccccCCCCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCceEEEEeCCC
Q 017124 81 WDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGD 159 (377)
Q Consensus 81 ~~~~~~~~~~~~-~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~ 159 (377)
|+.++.+|+|+| ++.|++++.++++++++|++++...|+.+++++||.+++++++++++|+||+|++|.++++|||+|+
T Consensus 82 wd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~ 161 (394)
T 1k8k_B 82 WDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD 161 (394)
T ss_dssp ------------------------------------------------------------------------CCEEEECS
T ss_pred HHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence 999999999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCCCCcchhHHHHHHHHHHhcceeecCHHHHHHHhccCCCcc
Q 017124 160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQELEAAKSSSAVE 239 (377)
Q Consensus 160 ~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 239 (377)
++|+|+||++|+++.++..++++||++++++|.++|.++++++.+..+.+.++++|+++|++..++..+.+.........
T Consensus 162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 99999999999999988899999999999999999999888887666788999999999999988877765543344456
Q ss_pred eeEEcCCCcEEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHH
Q 017124 240 KSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREI 319 (377)
Q Consensus 240 ~~~~~~~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL 319 (377)
..|.+|||+.+.++.+||.++|+||+|++++.+..+|+++|.++|.+||.++|+.+++||+||||+|++|||.+||++||
T Consensus 242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el 321 (394)
T 1k8k_B 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321 (394)
T ss_dssp EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcC-----------CCCceEEEECCCCCccccchhhhhhhcccccc-cccccHHHHhhcCCccccc
Q 017124 320 TALA-----------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWISKGEYDESGPAIVHR 374 (377)
Q Consensus 320 ~~~~-----------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itr~~y~e~G~~~~~~ 374 (377)
..+. |...++++..+++|.+++|+||+++|++.+|+ ++||||+||+|+|+++++|
T Consensus 322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 9887 77778999989999999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-71 Score=559.01 Aligned_cols=370 Identities=21% Similarity=0.390 Sum_probs=293.6
Q ss_pred CCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCcc----------------------------------------
Q 017124 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM---------------------------------------- 46 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~---------------------------------------- 46 (377)
+++||||+||+++|+|||||+.|+ .+|+++++++.....
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~-~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPA-SIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCE-EEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCC-eeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 457999999999999999999997 569999987532110
Q ss_pred ---------------------------------ccCCCccceecccccc--ccccceeeceecCC-----------ccCC
Q 017124 47 ---------------------------------VGMGQKDAYVGDEAQS--KRGILTLKYPIEHG-----------IVSN 80 (377)
Q Consensus 47 ---------------------------------~~~~~~~~~vg~~~~~--~~~~~~~~~p~~~g-----------~i~d 80 (377)
.....++++||++|+. ..+.+.++|||++| .+.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0112356899999975 35668999999999 4679
Q ss_pred HHHHHHHHHHhhcccccCCCCC---CcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCceEEEEeC
Q 017124 81 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDS 157 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDi 157 (377)
|+++|.+|+|+|++.|++++++ +|+|+++|+++++..|+.+++++||.|+++++++..+++||+|++|.+||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998765 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCCCCc-----chhHHHHHHHHHHhcceeecCHHHHH---
Q 017124 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT-----TTAEREIVRDMKEKLAYVALDYEQEL--- 229 (377)
Q Consensus 158 G~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~-----~~~~~~~~~~ik~~~~~v~~~~~~~~--- 229 (377)
|++.|+|+||+||+++.++..++++||++++++|.++|.++++.+. ...+++.++++|+++|+++.++..+.
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 9999999999999999999999999999999999999999887654 35678999999999999986642110
Q ss_pred ----------------------HH----------------------------------------------hccCCCccee
Q 017124 230 ----------------------EA----------------------------------------------AKSSSAVEKS 241 (377)
Q Consensus 230 ----------------------~~----------------------------------------------~~~~~~~~~~ 241 (377)
.. ..........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 00 0000112345
Q ss_pred EEcCCCcEEeeCCccccccccCCCCccC--------------------------------CCCCCChHHHHHHHHhcCC-
Q 017124 242 YELPDGQVITIGAERFRCPEVLFQPSLI--------------------------------GMEAAGIHETTYNSIMKCD- 288 (377)
Q Consensus 242 ~~~~~~~~i~v~~~~~~~~e~lf~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~- 288 (377)
+..|++..+.++.+++.++|.+|.|... +.+..+|+++|.++|.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 6788899999999999999999998542 1235689999999999998
Q ss_pred hhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCc-----eEEEECCC---CCccccchhhhhhhccccccccccc
Q 017124 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSM-----KIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIS 360 (377)
Q Consensus 289 ~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~-----~v~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~it 360 (377)
.|+|+.|++||+||||+|++|||.+||++||+.+.|... +++|+.+| +|.+++|+|||++|+|++|.++|||
T Consensus 494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wIt 573 (593)
T 4fo0_A 494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIY 573 (593)
T ss_dssp HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEE
T ss_pred HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeEC
Confidence 699999999999999999999999999999999998643 58999886 7999999999999999999999999
Q ss_pred HHHHhhcCCcccccccC
Q 017124 361 KGEYDESGPAIVHRKCF 377 (377)
Q Consensus 361 r~~y~e~G~~~~~~k~~ 377 (377)
|+||+|+|++||++||+
T Consensus 574 k~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 574 QREWQRFGVRMLRERAA 590 (593)
T ss_dssp HHHHHHHTTHHHHHHCS
T ss_pred HHHHHhhCcHHHhhcCC
Confidence 99999999999999995
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=3.6e-70 Score=527.57 Aligned_cols=370 Identities=39% Similarity=0.690 Sum_probs=331.8
Q ss_pred CCCCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCc--------cccCCCccceeccccccccccceeeceecCC
Q 017124 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76 (377)
Q Consensus 5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g 76 (377)
.+.++||||+||+++|+||++++.|+.++||+++++++... ..+....+++||+++....+ ..+++|+++|
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~-~~~~~pi~~G 81 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT-YATKWPIRHG 81 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTT-SEEECCEETT
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCC-CEEeccccCC
Confidence 36689999999999999999999999999999998876421 22223346899999987753 7899999999
Q ss_pred ccCCHHHHHHHHHHhhcccccCCCCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhh---------c
Q 017124 77 IVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA---------S 147 (377)
Q Consensus 77 ~i~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~---------~ 147 (377)
.+.||+.++.+|+++|.+.|+++++++++++++|++++...|+.+.+++||.+|+++++++++|+||+|+ .
T Consensus 82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 9999999999999999888999888999999999999999999999999999999999999999999998 4
Q ss_pred CCceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCCCCcchhHHHHHHHHHHhcceeecCHHH
Q 017124 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQ 227 (377)
Q Consensus 148 g~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~ 227 (377)
+. +++|||+|+++|+|+||++|.++.++..+.++||++++++|.++|.+++..+....+.+.++++|+++|++..++.+
T Consensus 162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~ 240 (418)
T 1k8k_A 162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240 (418)
T ss_dssp CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence 55 89999999999999999999999888899999999999999999998888777667789999999999999988877
Q ss_pred HHHHhccC-CCcceeEEcCCCc-----EEeeCCccccccccCCCCccCCCCC-CChHHHHHHHHhcCChhHHHHhhcCce
Q 017124 228 ELEAAKSS-SAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSLIGMEA-AGIHETTYNSIMKCDVDIRKDLYGNIV 300 (377)
Q Consensus 228 ~~~~~~~~-~~~~~~~~~~~~~-----~i~v~~~~~~~~e~lf~p~~~~~~~-~~l~~~I~~~i~~~~~~~~~~l~~nIv 300 (377)
+.++.... ......|.+||+. .+.++.+||.++|.||+|++++.+. .+|.++|.++|.+||.++|+.+++||+
T Consensus 241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv 320 (418)
T 1k8k_A 241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV 320 (418)
T ss_dssp HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence 66543221 2234689999988 8999999999999999999887764 799999999999999999999999999
Q ss_pred eccCCcCCcChHHHHHHHHHhcC----------------CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHH
Q 017124 301 LSGGSTMFPGIADRMSREITALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEY 364 (377)
Q Consensus 301 l~GG~s~i~gl~~rl~~eL~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y 364 (377)
||||+|++|||.+||+++|..+. |...++++..+++|.+++|+|||++|++.+|.++||||+||
T Consensus 321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey 400 (418)
T 1k8k_A 321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDY 400 (418)
T ss_dssp EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHH
T ss_pred EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHH
Confidence 99999999999999999999875 56677899999999999999999999999999999999999
Q ss_pred hhcCCccccccc
Q 017124 365 DESGPAIVHRKC 376 (377)
Q Consensus 365 ~e~G~~~~~~k~ 376 (377)
+|+|+++++|||
T Consensus 401 ~e~G~~~~~~~~ 412 (418)
T 1k8k_A 401 EEIGPSICRHNP 412 (418)
T ss_dssp HHHCGGGGGCCC
T ss_pred hhhCHHHHhhhc
Confidence 999999999976
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=2.3e-58 Score=448.28 Aligned_cols=362 Identities=22% Similarity=0.421 Sum_probs=302.1
Q ss_pred CCCCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCc---------c-----cc----------------------
Q 017124 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------M-----VG---------------------- 48 (377)
Q Consensus 5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~---------~-----~~---------------------- 48 (377)
+...+|||.+||.++|+|+|.|..|. .+|++++++..... . .+
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k 116 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK 116 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence 34678999999999999999999997 77999886431100 0 00
Q ss_pred -----------------------------------CCCccceeccccccc-cccceeeceecCCccC----C-------H
Q 017124 49 -----------------------------------MGQKDAYVGDEAQSK-RGILTLKYPIEHGIVS----N-------W 81 (377)
Q Consensus 49 -----------------------------------~~~~~~~vg~~~~~~-~~~~~~~~p~~~g~i~----d-------~ 81 (377)
...++++||++|..+ .+.+.+++|+++|.|. | |
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence 012477899999874 6678999999999998 8 9
Q ss_pred HHHHHHHHHhhcc-cccCCCC---CCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcC-CceEEEEe
Q 017124 82 DDMEKIWHHTFYN-ELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG-RTTGIVLD 156 (377)
Q Consensus 82 ~~~~~~~~~~~~~-~L~~~~~---~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVVD 156 (377)
+.++.+|+|+|.+ .|+++++ ++|+++++|++++...|+.+++++||.|++++++++.++++|+|++| .++|||||
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVD 276 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVN 276 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEc
Confidence 9999999999974 8999886 79999999999999999999999999999999999999999999999 69999999
Q ss_pred CCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCC-----CCcchhHHHHHHHHHHhccee-ecCHHHHHH
Q 017124 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY-----SFTTTAEREIVRDMKEKLAYV-ALDYEQELE 230 (377)
Q Consensus 157 iG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v-~~~~~~~~~ 230 (377)
+|++.|+|+||++|+++.++..++++||++++++|.++|.++++ ++.+..+.+++++||+++||| ..|+.
T Consensus 277 iG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~---- 352 (655)
T 4am6_A 277 IGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA---- 352 (655)
T ss_dssp ECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC----
T ss_pred CCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh----
Confidence 99999999999999999999999999999999999999999886 567778899999999999999 34431
Q ss_pred HhccCCCcceeE--EcCCC----cEEeeCCccccccccCCCCccCCC---------------------------------
Q 017124 231 AAKSSSAVEKSY--ELPDG----QVITIGAERFRCPEVLFQPSLIGM--------------------------------- 271 (377)
Q Consensus 231 ~~~~~~~~~~~~--~~~~~----~~i~v~~~~~~~~e~lf~p~~~~~--------------------------------- 271 (377)
.....+ ..|++ ..+.++.|||++||+||.|.+++.
T Consensus 353 ------~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~ 426 (655)
T 4am6_A 353 ------VQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLS 426 (655)
T ss_dssp ------SEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHH
T ss_pred ------hhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchh
Confidence 112222 33543 468899999999999999876410
Q ss_pred ----------------------------------------------CCCChHHHHHHHHhc-C---ChhHHHHhhcCcee
Q 017124 272 ----------------------------------------------EAAGIHETTYNSIMK-C---DVDIRKDLYGNIVL 301 (377)
Q Consensus 272 ----------------------------------------------~~~~l~~~I~~~i~~-~---~~~~~~~l~~nIvl 301 (377)
...+|.++|.++|.. | +...-+++++||++
T Consensus 427 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nili 506 (655)
T 4am6_A 427 QFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILI 506 (655)
T ss_dssp HHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEE
T ss_pred HHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEE
Confidence 014788899999873 2 44444599999999
Q ss_pred ccCCcCCcChHHHHHHHHHhcCC---------------------------------------------------------
Q 017124 302 SGGSTMFPGIADRMSREITALAP--------------------------------------------------------- 324 (377)
Q Consensus 302 ~GG~s~i~gl~~rl~~eL~~~~~--------------------------------------------------------- 324 (377)
|||+|+||||...|...|.-.-|
T Consensus 507 vGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 586 (655)
T 4am6_A 507 VGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQH 586 (655)
T ss_dssp ESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHH
T ss_pred EcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhh
Confidence 99999999998777766643111
Q ss_pred ----------CCceEEEECCCCC---ccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017124 325 ----------SSMKIKVVAPPER---KYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKCF 377 (377)
Q Consensus 325 ----------~~~~v~v~~~~~~---~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~ 377 (377)
...+|+|..+|.+ .+.+|+|||++|++.+|.++||||+||+|.|++|+++||+
T Consensus 587 ~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 587 QNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred hhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence 0134788888865 8899999999999999999999999999999999999995
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.3e-36 Score=285.77 Aligned_cols=307 Identities=16% Similarity=0.210 Sum_probs=238.1
Q ss_pred CCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCccccCCCccceecccccccc----ccceeeceecCCccCCHHH
Q 017124 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD 83 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~d~~~ 83 (377)
.+|+||+||+++++|+.++. |...+||+++.+.+. .+.+++|++|.... ....+.+|+++|.+.+|+.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~ 75 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV 75 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence 68999999999999998765 666789999876531 23457999987653 2345678999999999999
Q ss_pred HHHHHHHhhcccccCC-CCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCC-----ceEEEEeC
Q 017124 84 MEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-----TTGIVLDS 157 (377)
Q Consensus 84 ~~~~~~~~~~~~L~~~-~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi 157 (377)
.+++|.+++.+..... ....++++++|+.++..+|+.+.+. ++.+|++.+.++++|+||+++++. .+.+|||+
T Consensus 76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDi 154 (344)
T 1jce_A 76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDI 154 (344)
T ss_dssp HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEE
T ss_pred HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEe
Confidence 9999999984433322 4468899999999999999988885 599999999999999999999986 68999999
Q ss_pred CCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHc-CCCCcchhHHHHHHHHHHhcceeecCHHHHHHHhccCC
Q 017124 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER-GYSFTTTAEREIVRDMKEKLAYVALDYEQELEAAKSSS 236 (377)
Q Consensus 158 G~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~-~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~ 236 (377)
|+++|+++++..|.++ .....++||+++++.|.+++.++ +..+ ..+.+|++|++++....+...+
T Consensus 155 Gggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~~~~~~----~~~~ae~~K~~l~~~~~~~~~~-------- 220 (344)
T 1jce_A 155 GGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAI----GERTAERVKIEIGNVFPSKEND-------- 220 (344)
T ss_dssp CSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEEC----CHHHHHHHHHHHCBCSCCHHHH--------
T ss_pred CCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHHhCccc----CHHHHHHHHHHHhccCccccCC--------
Confidence 9999999999999887 45678999999999999998754 2222 3467999999999875443211
Q ss_pred CcceeEE-----cCCCc--EEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhh-cCceeccCCcCC
Q 017124 237 AVEKSYE-----LPDGQ--VITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLY-GNIVLSGGSTMF 308 (377)
Q Consensus 237 ~~~~~~~-----~~~~~--~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~-~nIvl~GG~s~i 308 (377)
...+. +.+|. .+.++.+++. .+|+|.+ ..+.+.|.++|.+++.+.+..++ ++|+||||+|++
T Consensus 221 --~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~ 290 (344)
T 1jce_A 221 --ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLL 290 (344)
T ss_dssp --HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCS
T ss_pred --cceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccc
Confidence 01222 22453 3444444443 2344421 23788889999999988888888 799999999999
Q ss_pred cChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc-cccc
Q 017124 309 PGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL-STFQ 355 (377)
Q Consensus 309 ~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l-~~~~ 355 (377)
|||.++|++++.. ++..+++|.+++|.||++++.. +.|+
T Consensus 291 p~l~~~l~~~~~~--------~v~~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 291 RGLDTLLQKETGI--------SVIRSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp BTHHHHHHHHHSS--------CEEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred hHHHHHHHHHHCC--------CccccCChHHHHHHHHHHHHhChHHHH
Confidence 9999999999942 2444678899999999999984 5553
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.93 E-value=1.1e-26 Score=228.57 Aligned_cols=297 Identities=17% Similarity=0.217 Sum_probs=200.2
Q ss_pred CCEEEeCCCCceEEeeeCCCCCCCC--------CCcceeecCCCCccccCCCccceecccccccc-----ccceeec---
Q 017124 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR-----GILTLKY--- 71 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~-----~~~~~~~--- 71 (377)
.+|.||+||++++++++.+..|..+ +||+++.. ....++|++|.... ....+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 5899999999999999987767654 67777651 23467898875431 1122333
Q ss_pred -eec---CCccCCH-HHHHHHHHHhhc---ccccCCCCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhh
Q 017124 72 -PIE---HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS 143 (377)
Q Consensus 72 -p~~---~g~i~d~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a 143 (377)
|+. +|.-.+. +....+++++.. +.++ .....+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||
T Consensus 73 ~p~~~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~~~~~VitvPa~~~~~qr~a~~~a~-~~AGl~~~~li~Ep~AA 149 (509)
T 2v7y_A 73 TDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLG--EPVTRAVITVPAYFNDAQRQATKDAG-RIAGLEVERIINEPTAA 149 (509)
T ss_dssp SCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHH
T ss_pred CCcEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEecCHHHH
Confidence 555 5642222 222333333321 1222 23468999999999999999888865 88999999999999999
Q ss_pred hhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cCcceEEEcccHHHHHHHHHHHHHHc-----CCCCcchh----
Q 017124 144 LYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA---- 206 (377)
Q Consensus 144 ~~~~g~-----~~~lVVDiG~~~t~v~~v~--~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~~-----~~~~~~~~---- 206 (377)
+++++. .+.+|+|+|+++++++.+. +|.. +.......++||.++++.|.+++.++ +.++....
T Consensus 150 Alay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~ 229 (509)
T 2v7y_A 150 ALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQ 229 (509)
T ss_dssp HHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHH
T ss_pred HHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence 999875 4789999999999999876 3543 22233456899999999999888653 44443211
Q ss_pred -HHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcC------CC---cEEeeCCccccccccCCCCccCCCCCCCh
Q 017124 207 -EREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELP------DG---QVITIGAERFRCPEVLFQPSLIGMEAAGI 276 (377)
Q Consensus 207 -~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~i~v~~~~~~~~e~lf~p~~~~~~~~~l 276 (377)
-.+.+|++|+.++... ...+.+| +| ..+.++.+.|. .+|.|-+ ..+
T Consensus 230 ~l~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~fe---~l~~~~~-----~~i 285 (509)
T 2v7y_A 230 RLKDAAEKAKKELSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKFE---ELSAHLV-----ERT 285 (509)
T ss_dssp HHHHHHHHHHHHTTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHHH---HHTHHHH-----HTT
T ss_pred HHHHHHHHHHHhcCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHHH---HHHHHHH-----HHH
Confidence 1356777887776431 1122222 22 12233333332 3333311 126
Q ss_pred HHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 277 ~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++|..+. +....+++|+|+||+|++|++.++|++.+.. .+..+.+|+.++|.||+++|..
T Consensus 286 ~~~i~~~L~~a~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 286 MGPVRQALQDAG--LTPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp HHHHHHHHHHHT--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence 777788887664 2345678999999999999999999998842 2345678999999999999864
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=4.6e-24 Score=193.61 Aligned_cols=244 Identities=17% Similarity=0.158 Sum_probs=180.2
Q ss_pred CCCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCccccCCCccceeccccccccccceeeceecCCccCCHHHHHH
Q 017124 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK 86 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~~~ 86 (377)
+-.++||+||.++|+.+..++. . .++ .+ .....|+++|.+.||+..+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~-~-----~l~-----------------~~---------~~~~~~l~~g~i~d~~~~~~ 75 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG-I-----PVA-----------------GA---------LKWASVVKDGLVVDYIGAIQ 75 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC-C-----EEE-----------------EE---------EEECCCCBTTBCTTHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC-c-----EEE-----------------EE---------eecccccCCCEEEcHHHHHH
Confidence 4578999999999998853321 1 011 11 11236889999999999999
Q ss_pred HHHHhhcccccC-CCCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCceEEEEeCCCCceEEE
Q 017124 87 IWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 165 (377)
Q Consensus 87 ~~~~~~~~~L~~-~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~ 165 (377)
+|++++...... ......++++.|..+....++. ++.+++.+|++...+..++.|++++++..+++|||+|+++|+++
T Consensus 76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~-~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~ 154 (272)
T 3h1q_A 76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAEA-CGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA 154 (272)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTH-HHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHH-HHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence 999997543332 2233567888888777666664 44567999999999999999999999999999999999999999
Q ss_pred EeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCCCCcchhHHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcC
Q 017124 166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELP 245 (377)
Q Consensus 166 ~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 245 (377)
++.+|.++ .....++||.++++.+.+.+. .+.+.++++|++++.- ++.+..
T Consensus 155 ~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~~-----~~~~~~------------- 205 (272)
T 3h1q_A 155 VIEKGKIT--ATFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSRH-----REIMRV------------- 205 (272)
T ss_dssp EEETTEEE--EECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTTH-----HHHHHH-------------
T ss_pred EEECCEEE--EEecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCCH-----HHHHHH-------------
Confidence 99999988 456789999999999998873 1346688899887621 111100
Q ss_pred CCcEEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCC
Q 017124 246 DGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPS 325 (377)
Q Consensus 246 ~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~ 325 (377)
.+.++. .+.+.|.+.+.+++ ..++|+|+||+|++|||.++|+++|..
T Consensus 206 --------------~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~---- 252 (272)
T 3h1q_A 206 --------------VRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK---- 252 (272)
T ss_dssp --------------HHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS----
T ss_pred --------------HHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC----
Confidence 011111 26677777777775 235999999999999999999999932
Q ss_pred CceEEEECCCCCccccchhhhhhh
Q 017124 326 SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 326 ~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
++..+++|+++.|+||+++|
T Consensus 253 ----~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 253 ----EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp ----CCBCCSSGGGHHHHHHHTTC
T ss_pred ----CccccCChHHHHHHHHHhcC
Confidence 34456789999999999875
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.91 E-value=8.1e-25 Score=208.33 Aligned_cols=304 Identities=16% Similarity=0.172 Sum_probs=194.8
Q ss_pred CCEEEeCCCCceEEeeeCCCCCCCC--------CCcceeecCCCCccccCCCccceecccccccc------ccceee---
Q 017124 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR------GILTLK--- 70 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~------~~~~~~--- 70 (377)
..|.||+||+++.+++..+..|..+ +||.++...+ ...++|.++.... ....++
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~~~~~~~~~k~~l 73 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTT---------SCEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECC---------CCEEECHHHHHhhhhCccceeehhHHhh
Confidence 4799999999999998865544432 5676655332 2234565543210 000000
Q ss_pred ---------------ceec-------------CCccCC-HHHHHHHHHHhhc---ccccCCCCCCcEEEEeCCCCChHHH
Q 017124 71 ---------------YPIE-------------HGIVSN-WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 71 ---------------~p~~-------------~g~i~d-~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~ 118 (377)
+|+. +|.... .+....+++++.. +.++ .....+++++|..++..+|
T Consensus 74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r 151 (383)
T 1dkg_D 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR 151 (383)
T ss_dssp TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence 1221 232222 2334455555431 2233 2335799999999999999
Q ss_pred HHHhhhhccccCCCeEEeeehhhhhhhhcCCc------eEEEEeCCCCceEEEEeeCC------eec-CcceEEEcccHH
Q 017124 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEG------YAL-PHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~v~~v~~g------~~~-~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|+||+++++.. +.+|+|+|+++|+++.+..+ ... .......++||+
T Consensus 152 ~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~ 230 (383)
T 1dkg_D 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (383)
T ss_dssp HHHHHHH-HHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred HHHHHHH-HHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence 9888875 889999999999999999988653 68999999999999988754 221 112345689999
Q ss_pred HHHHHHHHHHHHc-----CCCCcchh-----HHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcCCC-c--EEee
Q 017124 186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELPDG-Q--VITI 252 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~i~v 252 (377)
++++.|.+++.++ +.++.... ..+.+|++|++++..... .-..+..+..++| . .+.+
T Consensus 231 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~i 300 (383)
T 1dkg_D 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT----------DVNLPYITADATGPKHMNIKV 300 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEE----------EEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCce----------EEEEecccccCCCCeeEEEEE
Confidence 9999999988654 44443211 245688888887753100 0000111222333 2 2344
Q ss_pred CCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEE
Q 017124 253 GAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVV 332 (377)
Q Consensus 253 ~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~ 332 (377)
+.+.+. .+|+|.+ ..+.+.|.++|.++.. ....+++|+|+||+|++|++.++|++++.. ++.
T Consensus 301 t~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~ 362 (383)
T 1dkg_D 301 TRAKLE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR 362 (383)
T ss_dssp EHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCB
T ss_pred eHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCC
Confidence 433332 3344311 1267777788877652 344568999999999999999999999842 244
Q ss_pred CCCCCccccchhhhhhhcc
Q 017124 333 APPERKYSVWIGGSILASL 351 (377)
Q Consensus 333 ~~~~~~~~~w~Gasi~a~l 351 (377)
.+.+|..++|.||+++|++
T Consensus 363 ~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 363 KDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp CSSCTTTHHHHHHHHHTTT
T ss_pred CCcChHHHHHHHHHHHHHh
Confidence 5678999999999999875
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.91 E-value=2e-24 Score=206.32 Aligned_cols=301 Identities=17% Similarity=0.158 Sum_probs=185.2
Q ss_pred CCCEEEeCCCCceEEeeeCCCCCCCC--------CCcceeecCCCCccccCCCccceeccccccc--ccc----ceeece
Q 017124 7 IQPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK--RGI----LTLKYP 72 (377)
Q Consensus 7 ~~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~--~~~----~~~~~p 72 (377)
..+|.||+||+++++++..+..|..+ +||+++.. ....++|+++... ... ..+++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~k~~ 87 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFT----------DDERLIGDAAKNQVAANPQNTIFDIKRL 87 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEEC----------SSCEEESHHHHHTGGGCGGGEECCGGGT
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEe----------CCcEEecHHHHHhhHhCcccCHHHHHHH
Confidence 56799999999999999987665533 25554432 2245677776432 111 111221
Q ss_pred ecC--------------------------------C--ccCC-HHHHHHHHHHhh---cccccCCCCCCcEEEEeCCCCC
Q 017124 73 IEH--------------------------------G--IVSN-WDDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLNP 114 (377)
Q Consensus 73 ~~~--------------------------------g--~i~d-~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~ 114 (377)
+.. | .... -+....+++++. .+.++ .....+++++|..++
T Consensus 88 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~~~~~~vitvP~~~~ 165 (394)
T 3qfu_A 88 IGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--TKVTHAVVTVPAYFN 165 (394)
T ss_dssp TTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCC
T ss_pred hCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--CCcceEEEEECCCCC
Confidence 111 1 1111 123333444432 12233 234679999999999
Q ss_pred hHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCc------eEEEEeCCCCceEEEEee--CCeec-CcceEEEcccHH
Q 017124 115 KANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIY--EGYAL-PHAILRLDLAGR 185 (377)
Q Consensus 115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~v~~v~--~g~~~-~~~~~~~~~GG~ 185 (377)
..+|+.+.+.+ +.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++... .......++||.
T Consensus 166 ~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~ 244 (394)
T 3qfu_A 166 DAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGE 244 (394)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChH
Confidence 99999888877 889999999999999999998643 459999999999988775 33221 122334689999
Q ss_pred HHHHHHHHHHHHc-----CCCCcchh-----HHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEc---CCCcEEee
Q 017124 186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYEL---PDGQVITI 252 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v 252 (377)
++++.|.+++.++ +..+.... -.+.+|.+|+.++.. ....+.+ .++..+.+
T Consensus 245 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~~~~~~~ 308 (394)
T 3qfu_A 245 DFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQ----------------MSTRIEIDSFVDGIDLSE 308 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTC----------------SEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccC----------------CcEEEEEEeccCCceeEE
Confidence 9999999888532 22221110 023455555544321 1112222 12322222
Q ss_pred CCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEE
Q 017124 253 GAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVV 332 (377)
Q Consensus 253 ~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~ 332 (377)
.-.|... |.++.|- ...+.+.|.+.|.++..+ ...+++|+|+||+|++|++.++|++.+.. .++.
T Consensus 309 ~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~v~ 373 (394)
T 3qfu_A 309 TLTRAKF-EELNLDL-----FKKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDG-------KKAS 373 (394)
T ss_dssp EEEHHHH-HHHHHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTT-------CCCB
T ss_pred EEEHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCC-------CCCC
Confidence 2222221 1222221 112566677777665433 45668999999999999999999988732 2345
Q ss_pred CCCCCccccchhhhhhhcc
Q 017124 333 APPERKYSVWIGGSILASL 351 (377)
Q Consensus 333 ~~~~~~~~~w~Gasi~a~l 351 (377)
.+.+|+.++|.||+++|++
T Consensus 374 ~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 374 KGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp CCSCTTTHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHh
Confidence 6678999999999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.88 E-value=2.5e-23 Score=199.50 Aligned_cols=218 Identities=18% Similarity=0.210 Sum_probs=144.1
Q ss_pred CCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCc---------eEEEEeCCCCceEEEEee--CC
Q 017124 102 EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT---------TGIVLDSGDGVSHTVPIY--EG 170 (377)
Q Consensus 102 ~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~---------~~lVVDiG~~~t~v~~v~--~g 170 (377)
...+++++|..++..+|+.+.+. ++.+|++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. ++
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC
Confidence 35799999999999999988777 4889999999999999999988643 459999999999999874 43
Q ss_pred ee-cCcceEEEcccHHHHHHHHHHHHHHc-----CCCCcchh-----HHHHHHHHHHhcceeecCHHHHHHHhccCCCcc
Q 017124 171 YA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYVALDYEQELEAAKSSSAVE 239 (377)
Q Consensus 171 ~~-~~~~~~~~~~GG~~i~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 239 (377)
.. +.......++||.++++.+.+++.++ +..+.... -.+.+|+.|+.++.. ..
T Consensus 237 ~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~ 300 (404)
T 3i33_A 237 IFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS----------------TQ 300 (404)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTS----------------SE
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcC----------------cc
Confidence 32 22233457899999999999888432 22222111 023455555554321 11
Q ss_pred eeEEc---CCCcEEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHH
Q 017124 240 KSYEL---PDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS 316 (377)
Q Consensus 240 ~~~~~---~~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~ 316 (377)
..+.+ .++..+.+.-.|... |-++.|- ...+.+.|.+.|.+... ....++.|+|+||+|++|++.++|+
T Consensus 301 ~~~~~~~~~~g~~~~~~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~ 372 (404)
T 3i33_A 301 ASIEIDSLYEGVDFYTSITRARF-EELNADL-----FRGTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQ 372 (404)
T ss_dssp EEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred eEEEEeeccCCceeEEEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHH
Confidence 12221 133323222222222 2233331 11255666666665432 2345688999999999999999999
Q ss_pred HHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 317 REITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 317 ~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.+.. .++..+.+|..+++.||+++|.+
T Consensus 373 ~~~~~-------~~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 373 DFFNG-------KELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp HHTTT-------CCCBCSSCTTTHHHHHHHHHHHH
T ss_pred HHcCC-------CCCCCCcCHHHHHHHHHHHHHHH
Confidence 87732 13455678999999999999875
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.86 E-value=2.1e-21 Score=194.45 Aligned_cols=298 Identities=17% Similarity=0.216 Sum_probs=188.5
Q ss_pred CCEEEeCCCCceEEeeeCCCCCCC--------CCCcceeecCCCCccccCCCccceeccccccc------cccceee---
Q 017124 8 QPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLK--- 70 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~--------~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~--- 70 (377)
..|.||+||+++.+++..+..|.+ .+||+++...+ ...++|.+|... +..+.++
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~t~~~~Kr~i 73 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTT---------SCEEESHHHHTTTTTCGGGEEECGGGTT
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECC---------CcEEECHHHHHHhhhCCCCEeehhhHhh
Confidence 489999999999999886554432 25666654322 234566655331 0000111
Q ss_pred ---------------ceec-------------CCccCCH-HHHHHHHHHhh---cccccCCCCCCcEEEEeCCCCChHHH
Q 017124 71 ---------------YPIE-------------HGIVSNW-DDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 71 ---------------~p~~-------------~g~i~d~-~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~ 118 (377)
+|+. .|..... +....+++++. ...++. .-..+++++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~--~v~~~VitVPa~f~d~qr 151 (605)
T 2kho_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCS--CCCEEEEEECTTCCHHHH
T ss_pred CCCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC--CCcEEEEEECCCCCHHHH
Confidence 1222 2322222 33344444442 123432 235799999999999999
Q ss_pred HHHhhhhccccCCCeEEeeehhhhhhhhcCC------ceEEEEeCCCCceEEEEee------CCee-cCcceEEEcccHH
Q 017124 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY------EGYA-LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~~v~------~g~~-~~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|+||+++++. .+.+|+|+|+++++++.+. +|.. +.......++||.
T Consensus 152 ~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~ 230 (605)
T 2kho_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGG
T ss_pred HHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHH
Confidence 9888776 88999999999999999998864 3479999999999999886 3432 2222345689999
Q ss_pred HHHHHHHHHHHHc-----CCCCcchh-----HHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcC------CC-c
Q 017124 186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELP------DG-Q 248 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~------~~-~ 248 (377)
++++.|.+++.++ +.++.... -...+|.+|+.++... ...+.++ +| .
T Consensus 231 d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~ 294 (605)
T 2kho_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ----------------QTDVNLPYITADATGPK 294 (605)
T ss_dssp GTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------EEEEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEecccccCCCCce
Confidence 9999999888643 44433211 1345777777665421 1122221 22 1
Q ss_pred E--EeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCC
Q 017124 249 V--ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSS 326 (377)
Q Consensus 249 ~--i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~ 326 (377)
. +.++.+.| |-++.|-+ ..+.+.|.++|.... +...-++.|+||||+|++|++.+++++.+..
T Consensus 295 ~~~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~~~fg~----- 359 (605)
T 2kho_A 295 HMNIKVTRAKL---ESLVEDLV-----NRSIEPLKVALQDAG--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK----- 359 (605)
T ss_dssp EEEEEEEHHHH---HTTCCSTT-----GGGTSHHHHHHHTTT--CCTTTCSEEEEESGGGGSHHHHHHHHHHHSS-----
T ss_pred EEEEEEeHHHH---HHHHHHHH-----HHHHHHHHHHHHHcC--CChhhCceEEEECCcccChHHHHHHHHhcCC-----
Confidence 1 23333322 22333311 226777888887664 2234468999999999999999999988832
Q ss_pred ceEEEECCCCCccccchhhhhhhcc
Q 017124 327 MKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 327 ~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+....+|..+++.||+++|..
T Consensus 360 ---~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 360 ---EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp ---CCBCSSCTTTHHHHHHHHHHTT
T ss_pred ---CcCcCCCcchHHHHHHHHHHHH
Confidence 2345678899999999999974
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.85 E-value=6e-21 Score=189.38 Aligned_cols=215 Identities=17% Similarity=0.226 Sum_probs=146.4
Q ss_pred CcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCC-------ceEEEEeCCCCceEEEEee--CCee-
Q 017124 103 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA- 172 (377)
Q Consensus 103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~v~~v~--~g~~- 172 (377)
..+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||+++++. .+.+|+|+|+++++++.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A~-~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 57999999999999999888755 88999999999999999998863 4689999999999999887 6754
Q ss_pred cCcceEEEcccHHHHHHHHHHHHHH-----cCCCCcchh-----HHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeE
Q 017124 173 LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSY 242 (377)
Q Consensus 173 ~~~~~~~~~~GG~~i~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~ 242 (377)
+.......++||+++++.|.+++.+ .+.++.... -...+|++|+.++... ...+
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~i 282 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QASI 282 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEEE
Confidence 2334445689999999999988853 233332211 1245667776655321 1222
Q ss_pred EcC---CCcEE--eeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHH
Q 017124 243 ELP---DGQVI--TIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSR 317 (377)
Q Consensus 243 ~~~---~~~~i--~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~ 317 (377)
.++ +|... .+..+.| |.++.|-+ ..+.+.|.+++.... +.+..++.|+|+||+|++|++.++|++
T Consensus 283 ~i~~~~~g~~~~~~ltr~~~---e~l~~~~~-----~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~~ 352 (554)
T 1yuw_A 283 EIDSLYEGIDFYTSITRARF---EELNADLF-----RGTLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQD 352 (554)
T ss_dssp EETTCSSSCCEEEEEEHHHH---HHHTHHHH-----HHTTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHHH
T ss_pred EEeeccCCceEEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHHH
Confidence 222 23222 2222222 12222200 114556666666542 223456899999999999999999988
Q ss_pred HHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 318 eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+... ++..+.+|..+++.||+++|..
T Consensus 353 ~f~~~-------~v~~~~np~~aVA~Gaa~~a~~ 379 (554)
T 1yuw_A 353 FFNGK-------ELNKSINPDEAVAYGAAVQAAI 379 (554)
T ss_dssp HTTTC-------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HcCCC-------ccccCCCchhHHHHHHHHHHHH
Confidence 77421 3345678899999999999863
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.84 E-value=6.3e-21 Score=192.58 Aligned_cols=213 Identities=10% Similarity=0.176 Sum_probs=146.4
Q ss_pred CcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCC------------ceEEEEeCCCCceEEEEee--
Q 017124 103 HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVSHTVPIY-- 168 (377)
Q Consensus 103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~~~lVVDiG~~~t~v~~v~-- 168 (377)
..+++++|..++..+|+.+.+.+ +.+|++.+.++++|+||++++|. .+.+|+|+|+++++|+.+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 57999999999999999888866 88999999999999999987642 4689999999999999886
Q ss_pred CCee-cCcceEEEcccHHHHHHHHHHHHHH-----cCCCCcchh-----HHHHHHHHHHhcceeecCHHHHHHHhccCCC
Q 017124 169 EGYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYVALDYEQELEAAKSSSA 237 (377)
Q Consensus 169 ~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~ 237 (377)
+|.. +.......++||.++++.|.+++.+ .+.++.... -...+|.+|+.++...
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------- 282 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------- 282 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS---------------
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC---------------
Confidence 6654 3333345689999999999998853 233332111 1345666776654210
Q ss_pred cceeEEcC---CCc--EEeeCCcccc-ccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcCh
Q 017124 238 VEKSYELP---DGQ--VITIGAERFR-CPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 311 (377)
Q Consensus 238 ~~~~~~~~---~~~--~i~v~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl 311 (377)
...+.++ ++. .+.++.+.|. ..+.++.. +.+.|.++|..... ...-++.|+|+||+|++|++
T Consensus 283 -~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~---------i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v 350 (675)
T 3d2f_A 283 -NAPFSVESVMNDVDVSSQLSREELEELVKPLLER---------VTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTL 350 (675)
T ss_dssp -EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTT---------TTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHH
T ss_pred -ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHH
Confidence 1122222 122 2233332222 12223332 66677777765421 12346799999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 312 ADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 312 ~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.++|++.+.. .+....+|..+++.||+++|..
T Consensus 351 ~~~l~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 351 KQSISEAFGK--------PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHHHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence 9999988832 3456678999999999999863
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.82 E-value=3.7e-21 Score=184.57 Aligned_cols=237 Identities=14% Similarity=0.152 Sum_probs=149.2
Q ss_pred HHHHHHHHhhc---ccccCCCCCCcEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcCCc--------e
Q 017124 83 DMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRT--------T 151 (377)
Q Consensus 83 ~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--------~ 151 (377)
....+++++.. ..++ .....+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||+++++.. +
T Consensus 130 v~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~ 206 (409)
T 4gni_A 130 IATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDKI 206 (409)
T ss_dssp HHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCEE
T ss_pred HHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCCE
Confidence 34455555431 3333 23467999999999999999888776 889999999999999999998754 5
Q ss_pred EEEEeCCCCceEEEEe--eCCee-cCcceEEEcccHHHHHHHHHHHHHHc-----C--CCCcchh-----HHHHHHHHHH
Q 017124 152 GIVLDSGDGVSHTVPI--YEGYA-LPHAILRLDLAGRDLTDALMKILTER-----G--YSFTTTA-----EREIVRDMKE 216 (377)
Q Consensus 152 ~lVVDiG~~~t~v~~v--~~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~~-----~--~~~~~~~-----~~~~~~~ik~ 216 (377)
.+|+|+|+++|+++.+ .+|.. +.......++||.++++.|.+++.++ + .+..... -...+|.+|+
T Consensus 207 vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~ 286 (409)
T 4gni_A 207 IVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKR 286 (409)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHH
Confidence 8999999999999885 33321 12222347999999999999888643 1 1111100 0124555555
Q ss_pred hcceeecCHHHHHHHhccCCCcceeEEc---CCCcEEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHH
Q 017124 217 KLAYVALDYEQELEAAKSSSAVEKSYEL---PDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRK 293 (377)
Q Consensus 217 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~ 293 (377)
.++.. ....+.+ .++....+.-.|... |-+++|- ...+.+.|.+.|.+.. ...
T Consensus 287 ~ls~~----------------~~~~i~i~~~~~~~~~~~~itr~~~-~~~~~~~-----~~~i~~~i~~~l~~~~--~~~ 342 (409)
T 4gni_A 287 ALSRS----------------TNASFSVESLIDGLDFASTINRLRY-ETIARTV-----FEGFNRLVESAVKKAG--LDP 342 (409)
T ss_dssp HHHHS----------------SEEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHHHHHHHHHHHHTT--CCG
T ss_pred hCCCC----------------CceEEEeecccCCcceEEEeeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CCH
Confidence 44311 0111221 123222222222222 2233331 0115555566665442 223
Q ss_pred HhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEE------ECCCCCccccchhhhhhhccc
Q 017124 294 DLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKV------VAPPERKYSVWIGGSILASLS 352 (377)
Q Consensus 294 ~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~l~ 352 (377)
..++.|+||||+|++|++.++|++.+.. .+++ ....+|+.++..||+++|...
T Consensus 343 ~~i~~V~LvGG~s~~p~v~~~l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 343 LDVDEVIMSGGTSNTPRIAANFRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp GGCCEEEEESGGGGCHHHHHHHHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHCCEEEEECCccccHHHHHHHHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 4568899999999999999999877732 2345 344688999999999998763
No 18
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.78 E-value=2.1e-19 Score=180.00 Aligned_cols=300 Identities=18% Similarity=0.193 Sum_probs=179.3
Q ss_pred CCEEEeCCCCceEEeeeCCCCCC--------CCCCcceeecCCCCccccCCCccceeccccccc------cccceeecee
Q 017124 8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI 73 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~ 73 (377)
.+|.||+||+++.+++..+..|. ..+||+++...+ ...++|.+|... ...+.+++.+
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Krll 73 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GCTLVGQPAKRQAVTNPQNTLFAIKRLI 73 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTT---------SCEEESHHHHHTTTTCGGGEECCGGGTT
T ss_pred cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCC---------CcEEecHHHHHHHHhCCCcEehhhHHhh
Confidence 57999999999999987554443 344666654322 234566655432 0011111111
Q ss_pred c-------------------------------CCccCC-HHHHHHHHHHhh---cccccCCCCCCcEEEEeCCCCChHHH
Q 017124 74 E-------------------------------HGIVSN-WDDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLNPKANR 118 (377)
Q Consensus 74 ~-------------------------------~g~i~d-~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~ 118 (377)
. .|.... .+....+++++. ...|+. .-..+++++|..++..+|
T Consensus 74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr 151 (605)
T 4b9q_A 74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR 151 (605)
T ss_dssp TCBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHH
T ss_pred CCCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence 1 111122 233444444443 234443 235799999999999999
Q ss_pred HHHhhhhccccCCCeEEeeehhhhhhhhcCC------ceEEEEeCCCCceEEEEeeCCe----e---cCcceEEEcccHH
Q 017124 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEGY----A---LPHAILRLDLAGR 185 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~~v~~g~----~---~~~~~~~~~~GG~ 185 (377)
+.+.+.+ +.+|++.+.++++|.||++++|. .+.+|+|+|+++++++.+.-+. . +........+||.
T Consensus 152 ~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~ 230 (605)
T 4b9q_A 152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGE 230 (605)
T ss_dssp HHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHH
T ss_pred HHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChH
Confidence 8877776 88999999999999999998863 4679999999999999886433 1 1222234588999
Q ss_pred HHHHHHHHHHHHc-----CCCCcchhH-----HHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcC----C--C-c
Q 017124 186 DLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELP----D--G-Q 248 (377)
Q Consensus 186 ~i~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----~--~-~ 248 (377)
++++.|.+++.++ +.++..... ...+|..|..++.. ....+.++ + + .
T Consensus 231 d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~----------------~~~~i~~~~~~~~~~g~~ 294 (605)
T 4b9q_A 231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA----------------QQTDVNLPYITADATGPK 294 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTC----------------SEEEEEEEEEEECSSSEE
T ss_pred HHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcC----------------CCeEEEEeeeccCCCCCe
Confidence 9999999888642 333221111 33455666555422 11111111 1 1 1
Q ss_pred EEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCce
Q 017124 249 VITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMK 328 (377)
Q Consensus 249 ~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~ 328 (377)
.+.+.-.|..+ |-++.|- ...+.+.|.+++.... ....-++.|+||||+|++|++.+++++.+..
T Consensus 295 ~~~~~itr~~~-e~l~~~~-----~~~i~~~v~~~L~~a~--~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~------- 359 (605)
T 4b9q_A 295 HMNIKVTRAKL-ESLVEDL-----VNRSIEPLKVALQDAG--LSVSDIDDVILVGGQTRMPMVQKKVAEFFGK------- 359 (605)
T ss_dssp EEEEEEEHHHH-HHHHHHH-----HHHTTHHHHHHHHHTT--CCGGGCSEEEEESGGGGSHHHHHHHHHHHTS-------
T ss_pred eEEEEEeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CCHHHCcEEEEeCCccCchHHHHHHHHHhcc-------
Confidence 12222122211 1122220 0114445555555432 1223457899999999999999999988832
Q ss_pred EEEECCCCCccccchhhhhhhcc
Q 017124 329 IKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 329 v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+....+|+.++..||+++|..
T Consensus 360 -~~~~~~nPdeaVA~GAai~a~~ 381 (605)
T 4b9q_A 360 -EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp -CCCSSSCTTTHHHHHHHHHHHH
T ss_pred -CcCCCcChhHHHHHhHHHHHHH
Confidence 2344568899999999999864
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.76 E-value=1.3e-18 Score=162.67 Aligned_cols=179 Identities=15% Similarity=0.128 Sum_probs=128.1
Q ss_pred CCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCcccc--------C------CCccceeccccccccccceeecee
Q 017124 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG--------M------GQKDAYVGDEAQSKRGILTLKYPI 73 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~--------~------~~~~~~vg~~~~~~~~~~~~~~p~ 73 (377)
-.+.||+|+.++|+-. ++ .-.+.+||.++.........+ . ....+.||++|. +|+
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l 90 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQ 90 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCS
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------ccc
Confidence 3689999999999864 33 234568888876544221000 0 134567887654 899
Q ss_pred cCCccCCHHHHHHHHHHhhcccc-cCCCCCCcEE--EEeCCCCChHHHHHHhhhhccc-------------cCCCeEEee
Q 017124 74 EHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVL--LTEAPLNPKANREKMTQIMFET-------------FNVPAMYVA 137 (377)
Q Consensus 74 ~~g~i~d~~~~~~~~~~~~~~~L-~~~~~~~~vv--l~~p~~~~~~~~~~l~~~lfe~-------------~~~~~v~~~ 137 (377)
+++.+.+ +..+.++.+.+.+.. ........++ ++.|......+|+.+.+.+... +++..+.++
T Consensus 91 ~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 9999998 777777777764432 1112345689 9999988888888888776432 135679999
Q ss_pred ehhhhhhhhc--C-----C-ceEEEEeCCCCceEEEEee--CCeecCcceEEEcccHHHHHHHHHHHHHHc
Q 017124 138 IQAVLSLYAS--G-----R-TTGIVLDSGDGVSHTVPIY--EGYALPHAILRLDLAGRDLTDALMKILTER 198 (377)
Q Consensus 138 ~~~~~a~~~~--g-----~-~~~lVVDiG~~~t~v~~v~--~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~ 198 (377)
++|++|++++ + . .+.+|||+|+++|+++.+. +|.++.......++||+++++.+.+.++++
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 9999999974 2 1 4559999999999999998 787666556788999999999998877543
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.75 E-value=6e-18 Score=160.47 Aligned_cols=171 Identities=16% Similarity=0.235 Sum_probs=109.0
Q ss_pred HHHhhhhccccCCCeEEeeehhhhhhhhcC-------CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHH
Q 017124 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASG-------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 191 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l 191 (377)
+.+.+.+ +.+|++...+..+|+|++.+++ ..+.+|||+|+++|+++.+.+|.++ .....++||.++++.+
T Consensus 154 ~~~~~~~-~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~~~GG~~i~~~i 230 (377)
T 2ych_A 154 AGVLEAL-RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVLTLSGKDFTEAI 230 (377)
T ss_dssp HHHHHHH-HHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHHH
T ss_pred HHHHHHH-HHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE--EEEeeechHHHHHHHH
Confidence 4444444 8899999999999999998864 2456999999999999999999987 5677899999999999
Q ss_pred HHHHHHcCCCCcchhHHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcCCCcEEeeCCccccccccCCCCccCCC
Q 017124 192 MKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGM 271 (377)
Q Consensus 192 ~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~e~lf~p~~~~~ 271 (377)
.+.+ +. +.+.+|++|+++++......++. ..+.+++ ..+.++.+.+ .+++ .|
T Consensus 231 ~~~~---~~------~~~~aE~~K~~~~~~~~~~~~~~----------~~i~~~~-~~~~i~~~~~--~~~i-~~----- 282 (377)
T 2ych_A 231 ARSF---NL------DLLAAEEVKRTYGMATLPTEDEE----------LLLDFDA-ERERYSPGRI--YDAI-RP----- 282 (377)
T ss_dssp HHHT---TC------CHHHHHHHHHHTC------------------------------------CH--HHHH-HH-----
T ss_pred HHHh---CC------CHHHHHHHHhhcccccccccccc----------ccccccc-ccccCCHHHH--HHHH-HH-----
Confidence 8743 22 24679999999887643211110 0111211 1122221111 1111 11
Q ss_pred CCCChHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHH
Q 017124 272 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREIT 320 (377)
Q Consensus 272 ~~~~l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~ 320 (377)
....+.+.|.+++..++...+....++|+||||+|++||+.+++++.+.
T Consensus 283 ~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 283 VLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 0112555666666655445556678899999999999999999999994
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.69 E-value=2.7e-16 Score=150.36 Aligned_cols=199 Identities=12% Similarity=0.149 Sum_probs=131.4
Q ss_pred HHHHHHhhhhccccCCCeEEeeehhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHH
Q 017124 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA 190 (377)
Q Consensus 116 ~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~ 190 (377)
...+.+.+++ +..|+....++.+|+||++++.. .+.+|||+|+++|+++.+.+|.++ .....++||+++++.
T Consensus 168 ~~v~n~~~~~-~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~GG~~it~d 244 (419)
T 4a2a_A 168 KVYEMFYNFL-QDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVIKD 244 (419)
T ss_dssp HHHHHHHHHH-HTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESCCHHHHHHH
T ss_pred HHHHHHHHHH-HHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE--EEEecccHHHHHHHH
Confidence 3445566555 88999999999999999998764 368999999999999999999988 567889999999999
Q ss_pred HHHHHHHcCCCCcchhHHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcC--CC-cEEeeCCccc-cccccCCCC
Q 017124 191 LMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELP--DG-QVITIGAERF-RCPEVLFQP 266 (377)
Q Consensus 191 l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~i~v~~~~~-~~~e~lf~p 266 (377)
+...+. ...+.+|.+|.+++...... .....+.++ ++ ....++...+ ...+..++
T Consensus 245 Ia~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~ve- 303 (419)
T 4a2a_A 245 VSAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLR- 303 (419)
T ss_dssp HHHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHH-
T ss_pred HHHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHHH-
Confidence 998762 23567999999887653211 011122222 11 1122211111 11111211
Q ss_pred ccCCCCCCChHHHHHHHHhcCCh---h-HHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEEC-----C---
Q 017124 267 SLIGMEAAGIHETTYNSIMKCDV---D-IRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVA-----P--- 334 (377)
Q Consensus 267 ~~~~~~~~~l~~~I~~~i~~~~~---~-~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~-----~--- 334 (377)
.+.+.|.+.|..... + ......+.|+||||+|++||+.+.+++.+.. ++++.. |
T Consensus 304 --------ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~~~ 369 (419)
T 4a2a_A 304 --------EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS------PVRTGCYANSDRPSI 369 (419)
T ss_dssp --------HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSCCC
T ss_pred --------HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC------CeEEEecCCCCchhc
Confidence 155566666665432 1 1456778999999999999999999999842 456655 3
Q ss_pred -------CCCccccchhhhhhhccc
Q 017124 335 -------PERKYSVWIGGSILASLS 352 (377)
Q Consensus 335 -------~~~~~~~w~Gasi~a~l~ 352 (377)
.+|.|+.-+|-.+++...
T Consensus 370 ~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 370 INADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp BTCHHHHTCGGGHHHHHTTCC----
T ss_pred cCcccccCCchHHHHHHHHHHHhhc
Confidence 367888889988877553
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.56 E-value=8.6e-15 Score=135.53 Aligned_cols=288 Identities=11% Similarity=0.105 Sum_probs=152.8
Q ss_pred CEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCcccc--------CCCccceeccccccccccceeeceecCCccCC
Q 017124 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG--------MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~--------~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d 80 (377)
.+.||+|++++|+.+..++.....+|+............+ .++..+.+|..+.. .......+.-..
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~g~~y~vg~~a~~------~~~t~~~~~~~~ 75 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPD------AVVTTNIAWQYS 75 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEEEEECCEESSCCCCSSSCCCCEEEETTEEEEECTTCBS------CCCSCCSGGGGS
T ss_pred eEEEecCCccceEEEecCCCEEEEEecCceeecccccccCCCceeEEEECCEEEEEcccccc------cccCcCCCccch
Confidence 5899999999999885444333344332211110100001 12233455544321 111122222222
Q ss_pred HHHHHHHHHHhhcccccCCCCCCcEEEEeCCC-CCh-----------HHHHHHhhhh----ccccCCCeEEeeehhhhhh
Q 017124 81 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL-NPK-----------ANREKMTQIM----FETFNVPAMYVAIQAVLSL 144 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~-~~~-----------~~~~~l~~~l----fe~~~~~~v~~~~~~~~a~ 144 (377)
...+-.+. +.+. ..+....+..+++..|.. +.. ..++.+.+.+ .+.+++..+.++++|++|+
T Consensus 76 ~~~l~~i~-~aL~-~~~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~ 153 (320)
T 2zgy_A 76 DVNVVAVH-HALL-TSGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAG 153 (320)
T ss_dssp HHHHHHHH-HHHH-HHSCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHH
T ss_pred HHHHHHHH-HHHH-HcCCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHH
Confidence 33333333 2321 223333334588888855 211 1122223322 3566778999999999999
Q ss_pred hhcC-----CceEEEEeCCCCceEEEEeeCCee-cCcceEEEcccHHHHHHHHHHHHHHcCCCCcchhHHHHHHHH-HHh
Q 017124 145 YASG-----RTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDM-KEK 217 (377)
Q Consensus 145 ~~~g-----~~~~lVVDiG~~~t~v~~v~~g~~-~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~~i-k~~ 217 (377)
++++ ..+.+|||||+++|+++.+.+|.+ +.......++||.++++.+.+.+.+++..+ ..+.++++ |.+
T Consensus 154 ~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i----~~~~ae~~lk~~ 229 (320)
T 2zgy_A 154 YEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKG----SSYLADDIIIHR 229 (320)
T ss_dssp HHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGG----GHHHHHHHHHTT
T ss_pred HhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCCCC----CHHHHHHHHHHh
Confidence 8763 357899999999999999999876 433456779999999999999886543222 33456766 544
Q ss_pred cceeecCHHHHHHHhccCCCcceeEEcCCCcEEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhcCChhHHHHhhc
Q 017124 218 LAYVALDYEQELEAAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYG 297 (377)
Q Consensus 218 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~ 297 (377)
.... +.. .. . ..|. ......+. +.+ ....+.+.|.+.+.+. .-++
T Consensus 230 ~~~~---~~~--~~--i--------~~~~--------~~~~~~~~-i~~-----~~~~~~~~i~~~i~~~------~~~~ 274 (320)
T 2zgy_A 230 KDNN---YLK--QR--I--------NDEN--------KISIVTEA-MNE-----ALRKLEQRVLNTLNEF------SGYT 274 (320)
T ss_dssp TCHH---HHH--HH--S--------SSSC--------THHHHHHH-HHH-----HHHHHHHHHHHHHTTC------CCCC
T ss_pred hhhh---ccc--ce--e--------cCch--------hhHHHHHH-HHH-----HHHHHHHHHHHHHHhh------cCCC
Confidence 2100 000 00 0 0000 00000000 000 0001333444444432 1246
Q ss_pred CceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhc
Q 017124 298 NIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+||||+|.+ +.+.+ ++.++.. .-++..+++|+++..+|+.++++
T Consensus 275 ~vvl~GGga~l--l~~~l----~~~~~~~-~~~~~~~~~P~~a~A~G~~~~~~ 320 (320)
T 2zgy_A 275 HVMVIGGGAEL--ICDAV----KKHTQIR-DERFFKTNNSQYDLVNGMYLIGN 320 (320)
T ss_dssp EEEEESTTHHH--HHHHH----HHTSCCC-GGGEECCSCGGGHHHHHHHHHHC
T ss_pred eEEEECChHHH--HHHHH----HHHhCCC-CCceeeCCCcHHHHHHHHHHhcC
Confidence 89999999987 44444 4444321 00245677899999999998863
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.50 E-value=8.2e-15 Score=135.92 Aligned_cols=285 Identities=14% Similarity=0.122 Sum_probs=162.7
Q ss_pred CCCCCCEEEeCCCCceEEeee--C---CCCCCCCCCcceeecCCCC-------ccccCCCccceeccccccccccceeec
Q 017124 4 AEDIQPLVCDNGTGMVKAGFA--G---DDAPRAVFPSIVGRPRHTG-------VMVGMGQKDAYVGDEAQSKRGILTLKY 71 (377)
Q Consensus 4 ~~~~~~vviD~Gs~~~k~G~~--~---~~~P~~~~p~~~~~~~~~~-------~~~~~~~~~~~vg~~~~~~~~~~~~~~ 71 (377)
+++.-.|.||+|-+++|+... + ++.-+..+||.++...+.. .....++..++||+.+...
T Consensus 4 ~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~-------- 75 (329)
T 4apw_A 4 ITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED-------- 75 (329)
T ss_dssp -CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC--------
T ss_pred ccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc--------
Confidence 345557899999999998653 2 1123457888877543321 1223456678888865321
Q ss_pred eecCCccCCHHHHHHHHHHhhcccccCC-CCCCcEEEEeCCCCCh--HHHHHHhhhhcc-------------ccCCCeEE
Q 017124 72 PIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPK--ANREKMTQIMFE-------------TFNVPAMY 135 (377)
Q Consensus 72 p~~~g~i~d~~~~~~~~~~~~~~~L~~~-~~~~~vvl~~p~~~~~--~~~~~l~~~lfe-------------~~~~~~v~ 135 (377)
-.....- -+....++..++-+.+... ..+..+++..|...-. .+++.+.+.+-. .+.+..+.
T Consensus 76 ~~~~~k~--~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~ 153 (329)
T 4apw_A 76 SSETSKT--NLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDIT 153 (329)
T ss_dssp SGGGCCC--TTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEE
T ss_pred cccCCcC--chhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEE
Confidence 1122221 1234444445543444332 1234567777755332 234444444431 12246799
Q ss_pred eeehhhhhhhhcC----CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHH-c-CCCCcchhHHH
Q 017124 136 VAIQAVLSLYASG----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-R-GYSFTTTAERE 209 (377)
Q Consensus 136 ~~~~~~~a~~~~g----~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~-~-~~~~~~~~~~~ 209 (377)
+.+++++|.+... ..+.+|||||+++|+++.+.+|.++.......++||.++++.+.+.+.+ + +..+. ..
T Consensus 154 v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~----~~ 229 (329)
T 4apw_A 154 IKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTDLNNGNLIT----NE 229 (329)
T ss_dssp EEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTT----SB
T ss_pred EEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHhhccCCCCC----HH
Confidence 9999999998762 3578999999999999999999998766678899999999999987754 2 22221 12
Q ss_pred HHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcCCCcEEeeCCccccccccCCCCccCCCCCCChHHHHHHHHhc--C
Q 017124 210 IVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMK--C 287 (377)
Q Consensus 210 ~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~--~ 287 (377)
.++++|.. +.+.. .+....+. .....+.+ ..+.+.|.+.+.+ +
T Consensus 230 ~~e~i~~~-g~~~~----------------------g~~~~~~~--~~~i~~~~----------~e~~~~I~~~i~~~~~ 274 (329)
T 4apw_A 230 QAESALNN-GYMKK----------------------GGEIDTES--STVIKKVK----------EKFLKDAIKLIEKRGF 274 (329)
T ss_dssp TTTTCSSS-CSSCE----------------------ECTTCCST--THHHHHHH----------HHHHHHHHHHHHHHTC
T ss_pred HHHHHHhc-CCccc----------------------CCcchhHH--HHHHHHHH----------HHHHHHHHHHHHHcCC
Confidence 23444332 11100 00000000 00000000 0123333444432 3
Q ss_pred ChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 288 DVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 288 ~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
|.+ +.+.|+||||+|.+ +.+.+++++ +. ++...++|.++...|+..++..
T Consensus 275 ~~~----~~~~IvltGGGA~l--~~~~l~~~~----~~----~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 275 KLD----QLDSLIFIGGTTQK--LKEQISKTY----PN----NSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp CTT----SCSEEEEESTTHHH--HHHHHHHHS----TT----CEECCSSGGGHHHHHHHHHHHH
T ss_pred CHH----HccEEEEECChHHH--HHHHHHHHc----CC----CCEecCCChhhHHHHHHHHHhh
Confidence 333 45889999999998 445555543 32 2445678999999999887654
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.45 E-value=9.6e-14 Score=129.85 Aligned_cols=185 Identities=14% Similarity=0.162 Sum_probs=119.1
Q ss_pred CCEEEeCCCCceEEeeeCCCCCCCCCCcceeecCCCCc---------------cccCCCcc-ceeccccccccccceeec
Q 017124 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------------MVGMGQKD-AYVGDEAQSKRGILTLKY 71 (377)
Q Consensus 8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~---------------~~~~~~~~-~~vg~~~~~~~~~~~~~~ 71 (377)
-.|.||+|-.++|+ ..++ -.+.+||.++...+... .+..+... ++||+.|...... ..+
T Consensus 5 ~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~~ 79 (355)
T 3js6_A 5 YVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GKD 79 (355)
T ss_dssp EEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CEE
T ss_pred EEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--ccc
Confidence 47999999999996 4444 24678888875432211 11123455 8899877442111 122
Q ss_pred ee-cCCccCCHHHHHHHHHHhhc---ccccCCCCCCcEEEEeCCCCChHHH-HHHhhhhccc-----------cCCCeEE
Q 017124 72 PI-EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR-EKMTQIMFET-----------FNVPAMY 135 (377)
Q Consensus 72 p~-~~g~i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~-~~l~~~lfe~-----------~~~~~v~ 135 (377)
.+ ...+..+-+ ...++...+. +.+..+..+..+++..|......++ +.+.+.+-.. +.+..|.
T Consensus 80 ~~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~ 158 (355)
T 3js6_A 80 TASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVK 158 (355)
T ss_dssp CCCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEE
T ss_pred ccccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEE
Confidence 22 334444432 2223323321 1121111234588888887665555 4666666432 2236899
Q ss_pred eeehhhhhhhhcC-----------CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHc
Q 017124 136 VAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 198 (377)
Q Consensus 136 ~~~~~~~a~~~~g-----------~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~ 198 (377)
++++|.+|+++++ ..+.+|||||+++|+++.+.+|.++...+...++||..+++.+.+.+.++
T Consensus 159 v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 159 IVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999874 45679999999999999999999987777789999999999999998654
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.98 E-value=1.2e-09 Score=104.06 Aligned_cols=199 Identities=12% Similarity=0.101 Sum_probs=115.9
Q ss_pred HHHHhhhhccccCC--CeEEeeehhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHH
Q 017124 118 REKMTQIMFETFNV--PAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA 190 (377)
Q Consensus 118 ~~~l~~~lfe~~~~--~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~ 190 (377)
.+.+.+++-..+++ ..-. .+|+||.+++-. ...++||+|+++|+++.+.+|..+ +...+++||+++|..
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~D 445 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMI 445 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHH
Confidence 34455555333355 2222 788888887643 367999999999999999999988 677789999999999
Q ss_pred HHHHHHHcCCCCcchhHHHHHHHHHHhcceeecCHHHHHHHhccCCCcceeEEcCCCcEEee--CCc-cccccc-cCCCC
Q 017124 191 LMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQELEAAKSSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQP 266 (377)
Q Consensus 191 l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v--~~~-~~~~~e-~lf~p 266 (377)
+..-|. . .+.+.+|+||. ++.+.... ..... .+...+++ .+. ...++. .+..|
T Consensus 446 IA~~Lg---t-----~d~~~AErIK~-YG~A~ve~-------------lf~~~-dede~Iev~~~~lgp~~~~Rv~~~~~ 502 (610)
T 2d0o_A 446 IARELG---L-----EDRYLAEEIKK-YPLAKVES-------------LFHLR-HEDGSVQFFSTPLPPAVFARVCVVKA 502 (610)
T ss_dssp HHHHHT---C-----CCHHHHHHHHH-SCEEEECS-------------SSEEE-ETTSCEEECSSCCCGGGTTCEEEECS
T ss_pred HHHHhC---C-----CCHHHHHHhcc-cCceeecc-------------ccccc-CCCCeEEEecCCCCcceeeeeecccc
Confidence 998882 1 13678999999 88765331 00000 01112222 100 000001 00000
Q ss_pred cc-CCCCCCC--hHH--HHHHHHhcC---ChhHHH----------HhhcCceeccCCcCCcChHHHHHHHHHhcCCCCce
Q 017124 267 SL-IGMEAAG--IHE--TTYNSIMKC---DVDIRK----------DLYGNIVLSGGSTMFPGIADRMSREITALAPSSMK 328 (377)
Q Consensus 267 ~~-~~~~~~~--l~~--~I~~~i~~~---~~~~~~----------~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~ 328 (377)
+. ... .+. +.+ ++.+.+.+. ...+|. ..+..||||||+|+++|+.+-.++.|.++ .
T Consensus 503 ~~L~~I-~pR~~vEElelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y-----~ 576 (610)
T 2d0o_A 503 DELVPL-PGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY-----R 576 (610)
T ss_dssp SCEEEC-CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS-----S
T ss_pred cceeee-CCCcchHHHHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----C
Confidence 11 111 112 333 222331110 000111 11256999999999999999999888652 4
Q ss_pred EEEECC-----CCCccccchhhhhhh
Q 017124 329 IKVVAP-----PERKYSVWIGGSILA 349 (377)
Q Consensus 329 v~v~~~-----~~~~~~~w~Gasi~a 349 (377)
|++-.+ ..|.|++..|-.+|.
T Consensus 577 VRiGrP~~~gv~gP~fAtAvGLlly~ 602 (610)
T 2d0o_A 577 LVAGRGNIRGSEGPRNAVATGLILSW 602 (610)
T ss_dssp CEEEECCGGGTSTTSCHHHHHHHHHH
T ss_pred eEEecCCccccCCCcHHHHHHHHHHH
Confidence 566554 367888888865553
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.96 E-value=6.1e-10 Score=106.30 Aligned_cols=180 Identities=12% Similarity=0.122 Sum_probs=107.3
Q ss_pred ehhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHHHHHHHHHcCCCCcchhHHHHHH
Q 017124 138 IQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR 212 (377)
Q Consensus 138 ~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~~~~~~ 212 (377)
.+|+||.+++-. ...++||+|+++|+++.+.+|..+ +...+++||+++|..+..-|. . .+.+.+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg---~-----~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELG---L-----EDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHT---C-----SCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC---C-----CCHHHHH
Confidence 678888877643 367999999999999999999888 677789999999999998882 1 1368899
Q ss_pred HHHHhcceeecCHHHHHHHhccCCCcceeEEcCCCcEEee--CCc-cccccc-cCCCCc-cCCCCCCC--hHH--HHHHH
Q 017124 213 DMKEKLAYVALDYEQELEAAKSSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPS-LIGMEAAG--IHE--TTYNS 283 (377)
Q Consensus 213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v--~~~-~~~~~e-~lf~p~-~~~~~~~~--l~~--~I~~~ 283 (377)
+||. ++.+.... ..+.. .+...+++ .+. ...++. .+..|+ +... .+. +.+ ++.+.
T Consensus 462 rIK~-YG~A~~e~-------------lf~~~-dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEElelVR~~ 525 (607)
T 1nbw_A 462 AIKK-YPLAKVES-------------LFSIR-HENGAVEFFREALSPAVFAKVVYIKEGELVPI-DNASPLEKIRLVRRQ 525 (607)
T ss_dssp HHHH-SCEEEECS-------------SSEEE-ETTSCEEECSSCCCGGGTTCEEEEETTEEEEE-CCSSCHHHHHHHHHH
T ss_pred Hhcc-cCceeecc-------------ccccc-CCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHHHHHHHHH
Confidence 9999 88765331 00000 01111222 000 000000 000000 0011 111 333 22333
Q ss_pred ----------HhcCChhH---HHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECC-----CCCccccchhh
Q 017124 284 ----------IMKCDVDI---RKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAP-----PERKYSVWIGG 345 (377)
Q Consensus 284 ----------i~~~~~~~---~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~-----~~~~~~~w~Ga 345 (377)
+....... .-..+..||||||+|+++|+.+-.++.|.++ .|++-.+ ..|.|++..|-
T Consensus 526 ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGL 600 (607)
T 1nbw_A 526 AKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGL 600 (607)
T ss_dssp HHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHH
T ss_pred HhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHH
Confidence 22111000 0012256999999999999999999999762 3455444 36788888886
Q ss_pred hhh
Q 017124 346 SIL 348 (377)
Q Consensus 346 si~ 348 (377)
.+|
T Consensus 601 lly 603 (607)
T 1nbw_A 601 LLA 603 (607)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.64 E-value=5.5e-08 Score=87.62 Aligned_cols=169 Identities=18% Similarity=0.242 Sum_probs=92.9
Q ss_pred eEEeeehhhhhhhhcC---CceEEEEeCCCCceEEEEe-eCCeecCc-ceEEEcccHHHHHHHHHHHHHHcCCCCcchhH
Q 017124 133 AMYVAIQAVLSLYASG---RTTGIVLDSGDGVSHTVPI-YEGYALPH-AILRLDLAGRDLTDALMKILTERGYSFTTTAE 207 (377)
Q Consensus 133 ~v~~~~~~~~a~~~~g---~~~~lVVDiG~~~t~v~~v-~~g~~~~~-~~~~~~~GG~~i~~~l~~~l~~~~~~~~~~~~ 207 (377)
.+..++++.|+++++. .....|+|+|++.+.++.+ .+|..... ...+..-|+-++.+.+.+.| +..+..
T Consensus 73 ~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~~~~~~~~~~~g~G~f~d~~a~~l---~~~~~~--- 146 (276)
T 4ehu_A 73 ADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLLNFLMNDKCAAGTGRFLDVMAKII---EVDVSE--- 146 (276)
T ss_dssp CSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEEEEEEECSCSTTSHHHHHHHHHHH---TCCGGG---
T ss_pred CCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceEEEEeCCCcCcchhhHHHHHHHHh---ccChhh---
Confidence 3567889998887764 3456889999999888776 45543311 11234566666777777666 333322
Q ss_pred HHHHHHHHHhcc--e-e---ecCHHH-HHHHhccCCCcceeEEcCCCcEEeeCCccccccccCCCCccCCCCCCChHHHH
Q 017124 208 REIVRDMKEKLA--Y-V---ALDYEQ-ELEAAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETT 280 (377)
Q Consensus 208 ~~~~~~ik~~~~--~-v---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~~~~e~lf~p~~~~~~~~~l~~~I 280 (377)
..++....- . + ...+.+ +...... ..... |-+ ..++.+.|
T Consensus 147 ---~~~~~~~a~~~~~i~~~~~~f~~s~~~~~~~--------------------~~~~~-~di---------~a~~~~~v 193 (276)
T 4ehu_A 147 ---LGSISMNSQNEVSISSTCTVFAESEVISHLS--------------------ENAKI-EDI---------VAGIHTSV 193 (276)
T ss_dssp ---HHHHHTTCSSCCCCCCCSHHHHHHHHHHHHH--------------------TTCCH-HHH---------HHHHHHHH
T ss_pred ---hHHHHhcCCCCCCcCCccchhhhhHHHHhhh--------------------ccccH-HHH---------HHHHHHHH
Confidence 111111000 0 0 000000 0000000 00000 000 01233344
Q ss_pred HHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhc
Q 017124 281 YNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 281 ~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.+.+.. .-.+....+.|+|+||.|+.|+++++|++.+. .+++.+++|++....||+++|.
T Consensus 194 ~~~l~~--~~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 194 AKRVSS--LVKRIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHHHHH--HHHHHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHHH
T ss_pred HHHHHH--HHHhcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHHH
Confidence 443332 12233445789999999999999999987772 2567788999998999999984
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.77 E-value=7.3e-05 Score=66.78 Aligned_cols=47 Identities=17% Similarity=0.383 Sum_probs=38.9
Q ss_pred cCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 297 GNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.++-+++.+.+.+.|.. ++..+++++++.-+||+++|..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 6799999999999999999988833 3556667788889999999854
No 29
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.96 E-value=0.0015 Score=59.58 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=52.4
Q ss_pred HHHHHhhhhccccCCCeEEeeehhhhhhhh-------cC-CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHH
Q 017124 117 NREKMTQIMFETFNVPAMYVAIQAVLSLYA-------SG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 188 (377)
Q Consensus 117 ~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~-------~g-~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~ 188 (377)
.++.+++.+-+..|++ +.+++..-=|.|+ .+ ..+++|||||+++|.++-+.++.+. .....++|+-.++
T Consensus 98 N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 98 NAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLT 174 (315)
T ss_dssp THHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHH
T ss_pred CHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHHH
Confidence 4455666666667876 4455533322222 23 5689999999999999999999887 5677899999888
Q ss_pred HHHH
Q 017124 189 DALM 192 (377)
Q Consensus 189 ~~l~ 192 (377)
+.+.
T Consensus 175 e~~~ 178 (315)
T 1t6c_A 175 ETFF 178 (315)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8763
No 30
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.82 E-value=0.005 Score=55.31 Aligned_cols=51 Identities=12% Similarity=0.116 Sum_probs=40.3
Q ss_pred HhhhhccccCCCeEEeeehhhhhhhhc-----CCceEEEEeCCCCceEEEEeeCCeecC
Q 017124 121 MTQIMFETFNVPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+.+ +.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|++..
T Consensus 87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 142 (292)
T 2gup_A 87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHR 142 (292)
T ss_dssp HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEe
Confidence 55666 778887 78999999998873 5678999999986 6677788998764
No 31
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.41 E-value=0.019 Score=51.30 Aligned_cols=51 Identities=18% Similarity=0.006 Sum_probs=41.2
Q ss_pred hhcCceeccC-CcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhc
Q 017124 295 LYGNIVLSGG-STMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 295 l~~nIvl~GG-~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
-+++|+++|| .+..|++.++|.+.+.-. ..+++-++++++...+||+++++
T Consensus 236 ~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~~ 287 (287)
T 2ews_A 236 KTENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLEK 287 (287)
T ss_dssp TCCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTCC
T ss_pred CCCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhCC
Confidence 3457999999 999999999999776442 34677788899999999998763
No 32
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.30 E-value=0.0015 Score=60.19 Aligned_cols=73 Identities=18% Similarity=0.199 Sum_probs=47.6
Q ss_pred HHHHhhhhccccCCCeEEeee---hhhhhhhhc----C----CceEEEEeCCCCceEEEEeeC--Ceec--CcceEEEcc
Q 017124 118 REKMTQIMFETFNVPAMYVAI---QAVLSLYAS----G----RTTGIVLDSGDGVSHTVPIYE--GYAL--PHAILRLDL 182 (377)
Q Consensus 118 ~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~~----g----~~~~lVVDiG~~~t~v~~v~~--g~~~--~~~~~~~~~ 182 (377)
++.+++.+-+.+|++ +.+++ ++.++.++. . ..+++|+|||+++|.++.+.+ +.+. .......|+
T Consensus 104 ~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Slpl 182 (343)
T 3cer_A 104 REEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNI 182 (343)
T ss_dssp HHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESC
T ss_pred HHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEEeh
Confidence 345666665666765 34444 333333322 2 256999999999999998877 4321 125678899
Q ss_pred cHHHHHHHH
Q 017124 183 AGRDLTDAL 191 (377)
Q Consensus 183 GG~~i~~~l 191 (377)
|+..+++.+
T Consensus 183 G~v~lt~~~ 191 (343)
T 3cer_A 183 GSVRMTERH 191 (343)
T ss_dssp CHHHHHHHT
T ss_pred hHHHHHHHh
Confidence 999998876
No 33
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.27 E-value=0.06 Score=48.94 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=36.1
Q ss_pred cccCCCeEEeeehhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017124 127 ETFNVPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||+++.
T Consensus 94 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 94 QRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred hhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 456787 88999999988762 3578899999977 7777788998764
No 34
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.26 E-value=0.047 Score=49.83 Aligned_cols=52 Identities=19% Similarity=0.246 Sum_probs=37.5
Q ss_pred CceeccCCcCCcChHHHHHHHHHhcCCC-CceEEEECCCCCccccchhhhhhh
Q 017124 298 NIVLSGGSTMFPGIADRMSREITALAPS-SMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~gl~~rl~~eL~~~~~~-~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+-|.+++++.+.+.... ...+++..+.-...+.-+||+.++
T Consensus 272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 5889999988877888888888776532 224566655555667788988765
No 35
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.09 E-value=0.054 Score=49.25 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=36.0
Q ss_pred ccc-CCCeEEeeehhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017124 127 ETF-NVPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~-~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+ ++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|+++.
T Consensus 115 ~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~ 168 (321)
T 3r8e_A 115 SEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI 168 (321)
T ss_dssp HHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence 456 776 78999999987752 4578999999987 7777888998875
No 36
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.03 E-value=0.25 Score=44.23 Aligned_cols=51 Identities=12% Similarity=0.219 Sum_probs=38.1
Q ss_pred CceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhc
Q 017124 298 NIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+..+.|.+++++.+...... .+++..+.....+.-+||+.++.
T Consensus 240 ~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 240 HIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp EEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence 5899999999899999999999865543 34555554456778899887664
No 37
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=95.89 E-value=0.036 Score=53.78 Aligned_cols=70 Identities=19% Similarity=0.178 Sum_probs=48.6
Q ss_pred HHHHhhhhccccCCCeEEeeehh---hhhhh----hcCCceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHHH
Q 017124 118 REKMTQIMFETFNVPAMYVAIQA---VLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA 190 (377)
Q Consensus 118 ~~~l~~~lfe~~~~~~v~~~~~~---~~a~~----~~g~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~~ 190 (377)
...+++.+-+.+|++ |.+++.. -+..+ +....+++|+|||+++|.++.+.+|.+. .....++|.-.+++.
T Consensus 102 ~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 102 GPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLSEQ 178 (508)
T ss_dssp HHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehhhc
Confidence 345666665667776 4455432 22222 2234578999999999999999999887 567789999777764
No 38
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.80 E-value=0.024 Score=55.10 Aligned_cols=71 Identities=10% Similarity=0.077 Sum_probs=49.8
Q ss_pred HHHHhhhhccccCCCeEEeeehhh---hhhhh----cC-CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHH
Q 017124 118 REKMTQIMFETFNVPAMYVAIQAV---LSLYA----SG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189 (377)
Q Consensus 118 ~~~l~~~lfe~~~~~~v~~~~~~~---~a~~~----~g-~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~ 189 (377)
+..+++.+-+..|++ |.+++..- +...+ .. ...++|+|||+++|.++...++.+. .....++|.-.+++
T Consensus 98 ~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrlte 174 (513)
T 1u6z_A 98 ATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQ 174 (513)
T ss_dssp HHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHH
T ss_pred HHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHHHH
Confidence 355666666777875 44555332 22222 12 2379999999999999999888887 56778999988877
Q ss_pred HH
Q 017124 190 AL 191 (377)
Q Consensus 190 ~l 191 (377)
.+
T Consensus 175 ~f 176 (513)
T 1u6z_A 175 LY 176 (513)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 39
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.79 E-value=0.0046 Score=56.30 Aligned_cols=70 Identities=17% Similarity=0.185 Sum_probs=48.5
Q ss_pred HHHhhhhccccCCCeEEeeeh---hhhhhh----hcC--CceEEEEeCCCCceEEEEeeCCeecCcceEEEcccHHHHHH
Q 017124 119 EKMTQIMFETFNVPAMYVAIQ---AVLSLY----ASG--RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189 (377)
Q Consensus 119 ~~l~~~lfe~~~~~~v~~~~~---~~~a~~----~~g--~~~~lVVDiG~~~t~v~~v~~g~~~~~~~~~~~~GG~~i~~ 189 (377)
..+++.+-+.+|++ +.+++. +.++.+ +.. ..+++|+|||+++|.++.+.++.+. .....++|.-.+++
T Consensus 92 ~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e 168 (315)
T 3mdq_A 92 QVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQRLID 168 (315)
T ss_dssp HHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHHHHH
T ss_pred HHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhHHHH
Confidence 45556665667775 344443 222222 122 3579999999999999999999887 66788999987776
Q ss_pred HH
Q 017124 190 AL 191 (377)
Q Consensus 190 ~l 191 (377)
.+
T Consensus 169 ~f 170 (315)
T 3mdq_A 169 RF 170 (315)
T ss_dssp HS
T ss_pred Hh
Confidence 55
No 40
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.78 E-value=0.1 Score=46.97 Aligned_cols=53 Identities=13% Similarity=0.080 Sum_probs=36.0
Q ss_pred CceeccCCc-CC-cChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhc
Q 017124 298 NIVLSGGST-MF-PGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s-~i-~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+ .. +-|.+++++.+.+........++..+.-...+..+||+.++-
T Consensus 240 ~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 240 VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 588888888 66 448889999998776433233354444445677889887763
No 41
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.52 E-value=0.041 Score=50.00 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=35.9
Q ss_pred cccCCCeEEeeehhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017124 127 ETFNVPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...+.+|+.+.
T Consensus 106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 445777 78999999988762 4578999999987 6677788998765
No 42
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=95.45 E-value=0.068 Score=47.62 Aligned_cols=51 Identities=16% Similarity=0.283 Sum_probs=36.4
Q ss_pred CceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhh
Q 017124 298 NIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 298 nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
.|+|.||.+..+-|.+++++.+.+.... ..+++..+.....+...||+.++
T Consensus 236 ~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 236 CVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp EEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 5889999887788999999988875322 24455555445567788988765
No 43
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=95.24 E-value=0.051 Score=49.96 Aligned_cols=56 Identities=9% Similarity=0.069 Sum_probs=41.0
Q ss_pred HHHhhcCceeccC-CcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhh
Q 017124 292 RKDLYGNIVLSGG-STMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 292 ~~~l~~nIvl~GG-~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
++.-+++|+++|| .++.|++.+.|.+.|.---.. .+++.-+++++++-.+||++++
T Consensus 302 ~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 302 LNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 3444568999999 999999999999988521111 2345556678999999998864
No 44
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.33 E-value=0.26 Score=45.81 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=35.1
Q ss_pred cccCCCeEEeeehhhhhhhhc---C--CceEEEEeCCCCceEEEEeeCCeecC
Q 017124 127 ETFNVPAMYVAIQAVLSLYAS---G--RTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~---g--~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. | ..+.++|-+|.+ +-...|.+|++..
T Consensus 186 ~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~ 236 (380)
T 2hoe_A 186 EKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYR 236 (380)
T ss_dssp HHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECC
T ss_pred HHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEec
Confidence 446776 88999999988763 3 378999999986 6677788998764
No 45
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=94.10 E-value=0.42 Score=41.99 Aligned_cols=19 Identities=26% Similarity=0.349 Sum_probs=16.7
Q ss_pred CEEEeCCCCceEEeeeCCC
Q 017124 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~ 27 (377)
.++||+|-+++|+|+..++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 7999999999999988653
No 46
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=94.04 E-value=0.23 Score=45.44 Aligned_cols=46 Identities=20% Similarity=0.229 Sum_probs=34.9
Q ss_pred cccCCCeEEeeehhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017124 127 ETFNVPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|++..
T Consensus 129 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~ 181 (343)
T 2yhw_A 129 DTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIH 181 (343)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEec
Confidence 345777 78999999888763 3468899999976 6677788988764
No 47
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=93.48 E-value=0.043 Score=49.60 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=23.6
Q ss_pred ceEEEEeCCCCceEEEEeeCCeecC
Q 017124 150 TTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 150 ~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
.++++||||+++|+|+|+.+|+++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 6799999999999999999999985
No 48
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=92.68 E-value=1.1 Score=41.75 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=35.4
Q ss_pred cccCCCeEEeeehhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017124 127 ETFNVPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.||++..
T Consensus 184 ~~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 236 (406)
T 1z6r_A 184 QHTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVITDGHLLH 236 (406)
T ss_dssp HHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEETT
T ss_pred HHHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 446777 78899999988753 3568999999976 6677788998764
No 49
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=91.84 E-value=1 Score=39.58 Aligned_cols=19 Identities=21% Similarity=0.198 Sum_probs=16.1
Q ss_pred CEEEeCCCCceEEeeeCCC
Q 017124 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~ 27 (377)
.++||+|-+++|+|+..++
T Consensus 2 lL~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECcCcEEEEEEECC
Confidence 4789999999999988543
No 50
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=90.29 E-value=0.83 Score=39.69 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=16.5
Q ss_pred CEEEeCCCCceEEeeeCCC
Q 017124 9 PLVCDNGTGMVKAGFAGDD 27 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~~~ 27 (377)
.++||+|-+++|+|+..++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 5889999999999988643
No 51
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=89.22 E-value=1.2 Score=42.17 Aligned_cols=89 Identities=11% Similarity=0.093 Sum_probs=47.7
Q ss_pred HHHHHHHHHhhcccccC-CCCCCcEEEEeCCCCCh------HHHHHHhhhhcccc---CC--CeEEeeehh-------hh
Q 017124 82 DDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNPK------ANREKMTQIMFETF---NV--PAMYVAIQA-------VL 142 (377)
Q Consensus 82 ~~~~~~~~~~~~~~L~~-~~~~~~vvl~~p~~~~~------~~~~~l~~~lfe~~---~~--~~v~~~~~~-------~~ 142 (377)
+.++.+++.+. +.... ..+..|+.+..-..+.. ..++.+++.+-+.+ ++ ..+.+++.. ++
T Consensus 89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 34555655553 22211 12456777665443311 12344444443333 22 467777633 33
Q ss_pred hhhhcCC------ceEEEEeCCCCceEEEEeeCCe
Q 017124 143 SLYASGR------TTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 143 a~~~~g~------~~~lVVDiG~~~t~v~~v~~g~ 171 (377)
+.|..|. .+..++|+|+++|+|+-..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 3344452 5677889999999999665553
No 52
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=88.03 E-value=3.7 Score=36.27 Aligned_cols=69 Identities=16% Similarity=0.065 Sum_probs=46.6
Q ss_pred cEEEEeCCCCChHHHHHHhhhhccccCC-CeEEeeehhhhhhhh-cCCceEEEEeCCCCceEEEEeeCCeec
Q 017124 104 PVLLTEAPLNPKANREKMTQIMFETFNV-PAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 104 ~vvl~~p~~~~~~~~~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~~~lVVDiG~~~t~v~~v~~g~~~ 173 (377)
.+-+..|-.. ......+.+.+-+.++. ..+.+.++.-+|+++ .+..+++++=+|.+..-...+.||+..
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 4666677554 22223444444445665 368999999999998 567788888888876555566799875
No 53
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=82.17 E-value=14 Score=32.69 Aligned_cols=89 Identities=12% Similarity=0.189 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhhcccccCCCCCC---cEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhc-CCceEEEEe
Q 017124 81 WDDMEKIWHHTFYNELRVAPEEH---PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS-GRTTGIVLD 156 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~~~---~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~~~lVVD 156 (377)
++.+...++.++ +..+.+..+. .+-+..|-.........+ +..|.. +. .+.+.++.-+++++. +..++++|-
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~l-~~~~~~-~~-pv~v~NDa~aaa~ge~~~~~~v~v~ 128 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGEF-ESQAPG-FA-RLSLATDGYTTLLGAHGGQPGIIVA 128 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHHH-HHTCCC-CS-EEEEECHHHHHHHHHTTTSSEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHHH-HHhCCC-Cc-eEEEECCHHHHHHhhcCCCCeEEEE
Confidence 345555555554 3334433332 366777765443322222 222221 33 488999999998874 567888898
Q ss_pred CCCCceEEEEeeCCeec
Q 017124 157 SGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 157 iG~~~t~v~~v~~g~~~ 173 (377)
+|.+..-...+.+|...
T Consensus 129 ~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 129 LGTGSIGEALYPDGSHR 145 (305)
T ss_dssp ESSSEEEEEECTTSCEE
T ss_pred ecCCeEEEEEeCCCcEE
Confidence 98886434434488654
No 54
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=76.93 E-value=14 Score=32.50 Aligned_cols=55 Identities=24% Similarity=0.332 Sum_probs=36.9
Q ss_pred cEEEEeCCCCChHHHHHHhhhhccccCCCeEEeeehhhhhhhhcC-CceEEEEeCCCC
Q 017124 104 PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG-RTTGIVLDSGDG 160 (377)
Q Consensus 104 ~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVVDiG~~ 160 (377)
.+-+..|-..+......+.+.+-+ ++. .+.+.++.-+++++.. ..+.++|-+|.+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~-pv~v~ND~~aaa~~e~~~~~~v~l~~GTG 117 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAP-KVIIQHDGVIALFAETLGEPGVVVIAGTG 117 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSS-EEEEEEHHHHHHHHHHTTSCEEEEEESSS
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCC-CEEEeCcHHHHHhhccCCCCeEEEEecCC
Confidence 567777766433333345555534 664 4778899998888753 578889999988
No 55
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=76.31 E-value=15 Score=32.98 Aligned_cols=90 Identities=14% Similarity=0.165 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhcccccCCCC--CCcEEEEeCCCCChHHHHHHhhhhccccC--CCeEEeeehhhhhhhhcCCceEEEEe
Q 017124 81 WDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFN--VPAMYVAIQAVLSLYASGRTTGIVLD 156 (377)
Q Consensus 81 ~~~~~~~~~~~~~~~L~~~~~--~~~vvl~~p~~~~~~~~~~l~~~lfe~~~--~~~v~~~~~~~~a~~~~g~~~~lVVD 156 (377)
++.+...++.++ +..+.... -..+-+..|-.........+.+.+-+.++ ...|.+.++.-+++++....++++|-
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~~~~~~v~v~ 127 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 127 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhhCCCCcEEEE
Confidence 344555555554 33333322 23577778876655444455555545565 23478999999998885446788888
Q ss_pred CCCCceEEEEeeCCe
Q 017124 157 SGDGVSHTVPIYEGY 171 (377)
Q Consensus 157 iG~~~t~v~~v~~g~ 171 (377)
+|.+.-......+|.
T Consensus 128 ~GTGig~~~v~~~G~ 142 (347)
T 2ch5_A 128 SGTGSNCRLINPDGS 142 (347)
T ss_dssp ESSSEEEEEECTTSC
T ss_pred EcCCceeEEEcCCCC
Confidence 887654433223554
No 56
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=73.66 E-value=7.9 Score=34.65 Aligned_cols=46 Identities=11% Similarity=0.021 Sum_probs=35.3
Q ss_pred cccCCCeEEeeehhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017124 127 ETFNVPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP 174 (377)
Q Consensus 127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~~v~~g~~~~ 174 (377)
+.+++| |.+.++.-+++++. +..+.++|-+|.+ +-...|.+|++..
T Consensus 118 ~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 170 (327)
T 2ap1_A 118 ARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPIT 170 (327)
T ss_dssp HHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 446777 88999999988752 3468899999976 6677788998764
No 57
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=69.68 E-value=38 Score=30.91 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=36.9
Q ss_pred hhhccccCCCeEEeeehhhhhhhhc---C-----------------CceEEEEeCCCCceEEEEeeCCeecCc
Q 017124 123 QIMFETFNVPAMYVAIQAVLSLYAS---G-----------------RTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 123 ~~lfe~~~~~~v~~~~~~~~a~~~~---g-----------------~~~~lVVDiG~~~t~v~~v~~g~~~~~ 175 (377)
+.+-+.+++| |.+.++.-|++++- | ..+.++|-+|.+ +-...|.||+++..
T Consensus 102 ~~L~~~~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~givi~G~l~~G 172 (366)
T 3mcp_A 102 PFLEDIFGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVVIDGELLRG 172 (366)
T ss_dssp HHHHHHHCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEEECCEEecC
Confidence 3444567888 88999999888752 3 467888999865 66677889988743
No 58
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=65.29 E-value=4 Score=37.33 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=25.0
Q ss_pred ceEEEEeCCCCceEEEEeeC--CeecCcceEEEcccH
Q 017124 150 TTGIVLDSGDGVSHTVPIYE--GYALPHAILRLDLAG 184 (377)
Q Consensus 150 ~~~lVVDiG~~~t~v~~v~~--g~~~~~~~~~~~~GG 184 (377)
.+.+|+|||+++|+++-..+ +.+........++||
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~ 176 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYG 176 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETT
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECC
Confidence 36999999999999997644 333333345677776
No 59
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=64.75 E-value=66 Score=27.46 Aligned_cols=51 Identities=24% Similarity=0.345 Sum_probs=36.9
Q ss_pred hhhccccCCCeEEeeehhhhhhhhc-----C--Cc-eEEEEeCCCCceEEEEeeCCeecCc
Q 017124 123 QIMFETFNVPAMYVAIQAVLSLYAS-----G--RT-TGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 123 ~~lfe~~~~~~v~~~~~~~~a~~~~-----g--~~-~~lVVDiG~~~t~v~~v~~g~~~~~ 175 (377)
+.+-+.+++| |.+.++.-|++++. + .. +.++|-+|.+ +-...|.||++...
T Consensus 108 ~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~~G~l~~G 166 (267)
T 1woq_A 108 ALLTARLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIFDGKLVPN 166 (267)
T ss_dssp HHHHHHHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEETTEEETT
T ss_pred HHHHHHHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEECCEEccC
Confidence 3343456888 88999999998762 2 23 5678899875 77778899987743
No 60
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=62.84 E-value=41 Score=30.77 Aligned_cols=51 Identities=14% Similarity=0.186 Sum_probs=36.3
Q ss_pred cCceeccCCcCCcC-hHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 297 GNIVLSGGSTMFPG-IADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~g-l~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|||+||.+...- |.+++++.+.... .+.+........+...||+.++.-
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcC
Confidence 46999999987766 8899998887754 345654443345677888877643
No 61
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=60.74 E-value=6.5 Score=34.61 Aligned_cols=53 Identities=11% Similarity=0.115 Sum_probs=37.3
Q ss_pred HhhhhccccCC-CeEEeeehhhhhhhhc-CCceEEEEeCCCCceEEEEeeCCeec
Q 017124 121 MTQIMFETFNV-PAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPIYEGYAL 173 (377)
Q Consensus 121 l~~~lfe~~~~-~~v~~~~~~~~a~~~~-g~~~~lVVDiG~~~t~v~~v~~g~~~ 173 (377)
+.+.+-+.++. ..+.+.++.-+|+++. +..++++|=+|.+..-...+.||+..
T Consensus 76 l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 76 LRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp HHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEE
T ss_pred HHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEE
Confidence 44444345664 3488999999999865 67788888888876455667788775
No 62
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=51.77 E-value=39 Score=29.42 Aligned_cols=17 Identities=24% Similarity=0.225 Sum_probs=15.3
Q ss_pred CEEEeCCCCceEEeeeC
Q 017124 9 PLVCDNGTGMVKAGFAG 25 (377)
Q Consensus 9 ~vviD~Gs~~~k~G~~~ 25 (377)
-++||+|-+++|+|+..
T Consensus 25 ~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEEe
Confidence 49999999999999875
No 63
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=48.81 E-value=11 Score=33.38 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=37.2
Q ss_pred hhccccCCCeEEeeehhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecCc
Q 017124 124 IMFETFNVPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH 175 (377)
Q Consensus 124 ~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~~v~~g~~~~~ 175 (377)
.+-+.+++| |.+.++.-|++++- +..+.+.|-+|.+ +-...|.||+++..
T Consensus 92 ~l~~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 148 (302)
T 3epq_A 92 TVXNEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIVEGRLLQG 148 (302)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCS
T ss_pred HHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEccc
Confidence 333456887 88999999888753 3578899999865 66677889988754
No 64
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=44.98 E-value=17 Score=32.30 Aligned_cols=61 Identities=16% Similarity=0.276 Sum_probs=39.0
Q ss_pred CceeccCCcCCcC-hHHHHHHHHHhcCCC---CceEEEECCCCCccccchhhhhhhccccccccc
Q 017124 298 NIVLSGGSTMFPG-IADRMSREITALAPS---SMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 358 (377)
Q Consensus 298 nIvl~GG~s~i~g-l~~rl~~eL~~~~~~---~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~ 358 (377)
.|||-||.+..+. +.+.|.+.+++.+.. ...+++..+.-...+..+||+.++--..|.+-|
T Consensus 242 ~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~p~ 306 (310)
T 3htv_A 242 AVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFC 306 (310)
T ss_dssp EEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC---
T ss_pred EEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcccc
Confidence 5888888887755 467788888766521 124566665555678889998887554444433
No 65
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=41.91 E-value=19 Score=34.08 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=40.7
Q ss_pred CceeccCCcCCcChHHHHHHHHHhcCCC------CceEEEECCCCCccccchhhhhhhcc
Q 017124 298 NIVLSGGSTMFPGIADRMSREITALAPS------SMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 298 nIvl~GG~s~i~gl~~rl~~eL~~~~~~------~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.|.+-||...-|+|.+++++.+..+++. ..+|.+.... .++-+||+++|..
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~---dgsg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAI---DGXGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECC---CTTTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECC---CchhhhHHHHHHH
Confidence 4778888888899999999999988754 3467777664 5688999999876
No 66
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=39.55 E-value=19 Score=33.15 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=36.0
Q ss_pred HHhhhhccccCCCeEEeeehhh---------hhhh-----------------------hcCC--c--eEEEEeCCCCceE
Q 017124 120 KMTQIMFETFNVPAMYVAIQAV---------LSLY-----------------------ASGR--T--TGIVLDSGDGVSH 163 (377)
Q Consensus 120 ~l~~~lfe~~~~~~v~~~~~~~---------~a~~-----------------------~~g~--~--~~lVVDiG~~~t~ 163 (377)
.+.+.+-+.+++|.+ +.++.. ++++ +.++ . +.+++-+|.+ +.
T Consensus 111 ~l~~~l~~~~~~Pv~-v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtG-iG 188 (381)
T 1saz_A 111 IIAHRFSSETGVPAY-VVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGG-IS 188 (381)
T ss_dssp HHHHHHHHHHCCCEE-EESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSS-EE
T ss_pred HHHHHHHHhcCCCEE-EeCCCccccCcHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCC-cE
Confidence 344445567788864 777776 5544 2233 4 8899999876 57
Q ss_pred EEEeeCCeecC
Q 017124 164 TVPIYEGYALP 174 (377)
Q Consensus 164 v~~v~~g~~~~ 174 (377)
...|.+|+++.
T Consensus 189 ~g~i~~G~~~~ 199 (381)
T 1saz_A 189 IAAHRKGRVID 199 (381)
T ss_dssp EEEEETTEEEE
T ss_pred EEEEECCEEEE
Confidence 77788998774
No 67
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=35.29 E-value=8.7 Score=34.36 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=37.6
Q ss_pred hHHHHHHHHhcCChhHHHHhhcCceeccCCcCCcChHHHHHHHHHhcCC-CCceEEEECCCCCccccchhhhhhh
Q 017124 276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSREITALAP-SSMKIKVVAPPERKYSVWIGGSILA 349 (377)
Q Consensus 276 l~~~I~~~i~~~~~~~~~~l~~nIvl~GG~s~i~gl~~rl~~eL~~~~~-~~~~v~v~~~~~~~~~~w~Gasi~a 349 (377)
|...|...+..++++ .|+|.||.+..+.+-..+++.+.+... ....+++..+.....+..+||+.++
T Consensus 257 La~~i~~l~~~l~p~-------~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 257 LAVCLGNILTIVDPD-------LLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCC-------EEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 444444444444433 588888888765444445555554433 1123555554444566778988765
No 68
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=34.70 E-value=21 Score=32.10 Aligned_cols=27 Identities=15% Similarity=0.293 Sum_probs=23.4
Q ss_pred hcCceeccCCcCCcChHHHHHHHHHhc
Q 017124 296 YGNIVLSGGSTMFPGIADRMSREITAL 322 (377)
Q Consensus 296 ~~nIvl~GG~s~i~gl~~rl~~eL~~~ 322 (377)
.++|+|+||.+.=..+.++|.+.+...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999999888653
No 69
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=33.26 E-value=13 Score=32.65 Aligned_cols=45 Identities=24% Similarity=0.075 Sum_probs=29.3
Q ss_pred CceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhc
Q 017124 298 NIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+..+-|.+++++.+.+. .+... . ...++..||+.++.
T Consensus 242 ~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~--~-~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 242 KVYLKGGMFRSNIYHKFFTLYLEKE-----GIISD--L-GKRSPEIGAVILAY 286 (299)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHHHT-----TCEEE--C-CSCCHHHHHHHHHH
T ss_pred EEEEECCccCcHHHHHHHHHHCCCC-----eEecc--C-CCCChHHHHHHHHH
Confidence 5888888876666667777666554 23332 2 34667889988764
No 70
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=32.15 E-value=35 Score=32.24 Aligned_cols=22 Identities=14% Similarity=-0.071 Sum_probs=18.4
Q ss_pred ceEEEEeCCCCceEEEEeeCCe
Q 017124 150 TTGIVLDSGDGVSHTVPIYEGY 171 (377)
Q Consensus 150 ~~~lVVDiG~~~t~v~~v~~g~ 171 (377)
.+..|+|+|+++|+|+-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4679999999999999876654
No 71
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=31.27 E-value=25 Score=33.44 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=31.6
Q ss_pred hcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 296 YGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|.++||.|+-+-+.+.+.+-+ ..+|.+. +....++-+||+++|..
T Consensus 387 ~~~i~~~GG~a~s~~~~Qi~Adv~------g~pV~~~--~~~e~~~alGAA~lA~~ 434 (484)
T 2itm_A 387 PQSVTLIGGGARSEYWRQMLADIS------GQQLDYR--TGGDVGPALGAARLAQI 434 (484)
T ss_dssp CSCEEEESGGGCCHHHHHHHHHHH------CCCEEEE--SCTTSCHHHHHHHHHHH
T ss_pred cceEEEEeccccCHHHHHHHHHHh------CCeEEeC--CCCCcccHHHHHHHHHH
Confidence 357999999999876666555554 2244443 33334578899988865
No 72
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=30.28 E-value=14 Score=33.75 Aligned_cols=23 Identities=13% Similarity=0.427 Sum_probs=20.2
Q ss_pred cCceeccCCcCCcChHHHHHHHH
Q 017124 297 GNIVLSGGSTMFPGIADRMSREI 319 (377)
Q Consensus 297 ~nIvl~GG~s~i~gl~~rl~~eL 319 (377)
+.|++|||++.=|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 56999999999999999888766
No 73
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=30.04 E-value=89 Score=26.99 Aligned_cols=49 Identities=12% Similarity=-0.054 Sum_probs=33.7
Q ss_pred EEEEeCCCCceEEEEeeCCeecCcceEEE-cccHHHHHHHHHHHHHHcCC
Q 017124 152 GIVLDSGDGVSHTVPIYEGYALPHAILRL-DLAGRDLTDALMKILTERGY 200 (377)
Q Consensus 152 ~lVVDiG~~~t~v~~v~~g~~~~~~~~~~-~~GG~~i~~~l~~~l~~~~~ 200 (377)
-|+||+|.+.+....+.++..+....... ....+.+...+..++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 48999999999999888877663322222 24566677777777766553
No 74
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=29.83 E-value=13 Score=34.07 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=35.2
Q ss_pred HhhhhccccCCCeEEeeehhhhhhhh----------------c--------------C----CceEEEEeCCCCceEEEE
Q 017124 121 MTQIMFETFNVPAMYVAIQAVLSLYA----------------S--------------G----RTTGIVLDSGDGVSHTVP 166 (377)
Q Consensus 121 l~~~lfe~~~~~~v~~~~~~~~a~~~----------------~--------------g----~~~~lVVDiG~~~t~v~~ 166 (377)
+.+.+-+.+++..|.+.++.-+++++ . | ..+.++|-+|.+ +-...
T Consensus 119 l~~~l~~~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTG-iG~gi 197 (373)
T 2q2r_A 119 LSDYPKALFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTG-LGSSL 197 (373)
T ss_dssp GGGSCTTTSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSS-EEEEE
T ss_pred HHHHHHHhcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCc-eeEEE
Confidence 33333233777558899999999888 2 3 257899999876 55666
Q ss_pred eeCCeecC
Q 017124 167 IYEGYALP 174 (377)
Q Consensus 167 v~~g~~~~ 174 (377)
|.+|++..
T Consensus 198 i~~g~l~~ 205 (373)
T 2q2r_A 198 IYYNPPMN 205 (373)
T ss_dssp EEECC---
T ss_pred EecCcccC
Confidence 77886654
No 75
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=28.81 E-value=20 Score=37.25 Aligned_cols=51 Identities=12% Similarity=0.296 Sum_probs=40.0
Q ss_pred cCceeccCCcCC-cChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 297 GNIVLSGGSTMF-PGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i-~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
..|++-||.+.. |.|.+++++.+.++.+. .++++... +.+.-+||+++|..
T Consensus 408 ~~IvigGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 408 TTVGVDGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLLS---ESGSGKGAAMVTAV 459 (917)
T ss_dssp EEEEEECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEEC---TTCHHHHHHHHHHH
T ss_pred eEEEECCchhhccHHHHHHHHHHHHHhcCC-CceEEEEe---ccchHHHHHHHHHh
Confidence 357777777666 99999999999988754 46777765 56788999998866
No 76
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=28.66 E-value=30 Score=30.92 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=31.5
Q ss_pred CceeccCCcCC-cChHHHHHHHHHhcC--CC---CceEEEECCCCCccccchhhhhhhc
Q 017124 298 NIVLSGGSTMF-PGIADRMSREITALA--PS---SMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i-~gl~~rl~~eL~~~~--~~---~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+.. +-|.+.+++.+.+.. +. ...+.+... .. +...||+.++.
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--~~-a~~~GAa~la~ 323 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--RH-SSALGGASLGA 323 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--SS-CTHHHHHHHHH
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--CC-ChHHHHHHHHH
Confidence 57888888753 667788888887663 21 223444333 34 77889988763
No 77
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=27.46 E-value=16 Score=33.47 Aligned_cols=23 Identities=17% Similarity=0.515 Sum_probs=20.0
Q ss_pred cCceeccCCcCCcChHHHHHHHH
Q 017124 297 GNIVLSGGSTMFPGIADRMSREI 319 (377)
Q Consensus 297 ~nIvl~GG~s~i~gl~~rl~~eL 319 (377)
..|++|||++.=|-|.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999888765
No 78
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=27.05 E-value=35 Score=32.20 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=36.6
Q ss_pred ceeccCCc-CCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 299 IVLSGGST-MFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 299 Ivl~GG~s-~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
|.+.||.. .-|.|.+++++.+.+++....+|.+... ..+..+||+++|..
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~---~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLS---EDGSGKGAAAIAAS 446 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEEC---TTHHHHHHHHHHTT
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEEC---CCccHHHHHHHHHH
Confidence 44445553 6789999999999887644446666643 57789999998865
No 79
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=25.99 E-value=56 Score=31.04 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=32.0
Q ss_pred hcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 296 YGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
.+.|+++||.|+=+-+.+.+.+-+. .+|.+.... -++-+||+++|..
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~g------~pV~~~~~~---e~~alGaA~lA~~ 440 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADILN------RKVIRPVVK---ETTALGAAYLAGL 440 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCS---CHHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhcC------CeEEEcCCC---cchHHHHHHHHHH
Confidence 4679999999988766665555442 245554432 3678899998865
No 80
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=25.44 E-value=29 Score=33.19 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=30.2
Q ss_pred hcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 296 YGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
++.|+++||.|+-+-+.+.+.+-+ ..+|.+.... -++-+||+++|..
T Consensus 401 ~~~i~~~GGga~s~~~~Qi~ADv~------g~pV~~~~~~---e~~alGaA~lA~~ 447 (508)
T 3ifr_A 401 PQRFFASDGGTRSRVWMGIMADVL------QRPVQLLANP---LGSAVGAAWVAAI 447 (508)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH------TSCEEEEECC---STHHHHHHHHHHH
T ss_pred CCEEEEeCCcccCHHHHHHHHHHh------CCeEEecCCC---CchHHHHHHHHHH
Confidence 356999999998775655544444 2245554432 3566899988864
No 81
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=25.43 E-value=23 Score=35.90 Aligned_cols=26 Identities=27% Similarity=0.354 Sum_probs=21.7
Q ss_pred hcCceeccCCcCCcChHHHHHHHHHh
Q 017124 296 YGNIVLSGGSTMFPGIADRMSREITA 321 (377)
Q Consensus 296 ~~nIvl~GG~s~i~gl~~rl~~eL~~ 321 (377)
.++|+|+||.+.=.-|.+++.+.|+.
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L~~ 731 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVVEA 731 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHGGG
T ss_pred cCEEEEEchHHHHHHHHHHHHHHHHH
Confidence 46899999999988788888877765
No 82
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=24.06 E-value=37 Score=32.61 Aligned_cols=47 Identities=15% Similarity=0.068 Sum_probs=31.5
Q ss_pred hcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 296 YGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 296 ~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
++.|+++||.|+=+-+.+.+.+-+ ..+|.+... .-++-+||+++|..
T Consensus 426 ~~~i~~~GGgaks~~~~Qi~ADvl------g~pV~~~~~---~e~~alGAA~lA~~ 472 (520)
T 4e1j_A 426 DTVLRVDGGMVASDWTMQRLSDLL------DAPVDRPVI---LETTALGVAWLAGS 472 (520)
T ss_dssp -CCEEEESGGGGCHHHHHHHHHHH------TSCEEEESC---CCHHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHHHh------CCeEEecCC---CccHHHHHHHHHHH
Confidence 578999999998876666555444 224555443 34677899998865
No 83
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=22.81 E-value=28 Score=31.19 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=32.2
Q ss_pred hcCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCC---Cccccchhhhh
Q 017124 296 YGNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPE---RKYSVWIGGSI 347 (377)
Q Consensus 296 ~~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~---~~~~~w~Gasi 347 (377)
.++|+++||.+.-..+.++|.+.+... .++++.+|. .+-++-+|.+.
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~-----g~~v~~p~~~~~~D~G~~iG~a~ 294 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR-----GIKFFVPPYDLCRDNGAMIAYTG 294 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH-----TCEEECCCHHHHSSCHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc-----CCEEEecCCCCCChhHHHHHHHH
Confidence 468999999999999999999888653 135655542 13344455443
No 84
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=22.58 E-value=46 Score=31.65 Aligned_cols=46 Identities=11% Similarity=0.123 Sum_probs=32.0
Q ss_pred cCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 297 GNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+.+-+. .+|.+.... -++-+||+++|..
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~g------~pV~~~~~~---e~~alGaA~la~~ 445 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLLG------VPVAVPEVT---ETTALGAALMAGV 445 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCS---CHHHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHhC------CeeEecCCc---ccHHHHHHHHHHh
Confidence 569999999998877766665552 245554433 3678899998865
No 85
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=22.41 E-value=1.5e+02 Score=26.04 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=35.7
Q ss_pred CceeccCCcCC-cChHHHHHHHHHhcCC-C--CceEEEECCCCCccccchhhhhhhc
Q 017124 298 NIVLSGGSTMF-PGIADRMSREITALAP-S--SMKIKVVAPPERKYSVWIGGSILAS 350 (377)
Q Consensus 298 nIvl~GG~s~i-~gl~~rl~~eL~~~~~-~--~~~v~v~~~~~~~~~~w~Gasi~a~ 350 (377)
.|+|.||.+.. +-|.+.+++.+.+... . ...+++....-...+.-+||+.++.
T Consensus 255 ~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 255 AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 47888888876 3357888888887664 1 1235666655556778889877654
No 86
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=21.98 E-value=45 Score=31.70 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=29.7
Q ss_pred cCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhccc
Q 017124 297 GNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASLS 352 (377)
Q Consensus 297 ~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~ 352 (377)
+.|+++||.|+=+-+.+.+.+- + +. .+|.+.... -++-+||+++|...
T Consensus 389 ~~i~~~GG~a~s~~w~Qi~ADv-~--~g--~pV~~~~~~---e~~alGAA~lA~~a 436 (482)
T 3h6e_A 389 GRILVEGRFAEADVFVRALASL-R--PD--CAVYTANAH---NDVSFGALRLIDPG 436 (482)
T ss_dssp SEEEEESGGGGCHHHHHHHHHH-S--TT--SEEEEESSC---CCTTGGGHHHHCTT
T ss_pred CeEEEeCCcccCHHHHHHHhhh-c--CC--CeEEEcCCC---chHHHHHHHHhCcc
Confidence 5699999999865444333322 0 22 255554433 35678999998775
No 87
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=21.86 E-value=75 Score=30.20 Aligned_cols=46 Identities=26% Similarity=0.200 Sum_probs=31.8
Q ss_pred cCceeccCCcCCcChHHHHHHHHHhcCCCCceEEEECCCCCccccchhhhhhhcc
Q 017124 297 GNIVLSGGSTMFPGIADRMSREITALAPSSMKIKVVAPPERKYSVWIGGSILASL 351 (377)
Q Consensus 297 ~nIvl~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 351 (377)
+.|+++||.|+-+-+.+.+.+-+. .+|.+.... -++-+||+++|..
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~g------~pV~~~~~~---e~~alGaA~la~~ 454 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDIIN------TKIEVSKYK---EVTSLGAAVLAGL 454 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHHT------SCEEEESCS---CHHHHHHHHHHHH
T ss_pred ceEEEeCccccCHHHHHHHHHHHC------CeEEecCCC---cchHHHHHHHHHH
Confidence 679999999998766666555552 245554433 3678899998865
No 88
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=20.57 E-value=84 Score=30.04 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=22.6
Q ss_pred CCCeEEeeehhhhhhhhcCC--ceEEEEeCCCCc
Q 017124 130 NVPAMYVAIQAVLSLYASGR--TTGIVLDSGDGV 161 (377)
Q Consensus 130 ~~~~v~~~~~~~~a~~~~g~--~~~lVVDiG~~~ 161 (377)
++|.+.-.-+..+++++.|. ..-+++-+|.+.
T Consensus 257 g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~ 290 (520)
T 4e1j_A 257 AIPILGVAGDQQAATIGQACFKPGMLKSTYGTGC 290 (520)
T ss_dssp CCBEEEECCHHHHHHHHTTCCSTTCEEEEESSSE
T ss_pred CCeEEEECCcHHHHHHhCCCCCCCcEEEEecCch
Confidence 56777777788899999884 334566666654
No 89
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=20.05 E-value=42 Score=26.49 Aligned_cols=66 Identities=9% Similarity=0.046 Sum_probs=42.0
Q ss_pred CCCeEEeeehhhhhhhhcCCceEEEEeCCCCceEEEEeeCCeecCcc-eEEEcccHHHHHHHHHHHHHHc
Q 017124 130 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA-ILRLDLAGRDLTDALMKILTER 198 (377)
Q Consensus 130 ~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~~v~~g~~~~~~-~~~~~~GG~~i~~~l~~~l~~~ 198 (377)
.+..+.+-++.+.++--....+-|.+|+-.-.|..+||..|...... .....+ .++..+.++|+..
T Consensus 23 hi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V---~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 23 HINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLV---HVNDLFLQYIQKN 89 (156)
T ss_dssp EEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEE---CCSHHHHHHHHHC
T ss_pred EEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEE---EeCHHHHHHHhcC
Confidence 34455554444443333456788999999999999999998554332 233333 5566777777653
Done!