Query 017130
Match_columns 376
No_of_seqs 180 out of 1124
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 09:25:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017130.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017130hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oaa_G ATP synthase gamma chai 100.0 7E-87 2.4E-91 644.4 37.7 286 51-372 1-286 (286)
2 3oee_G ATP synthase subunit ga 100.0 1.4E-82 4.6E-87 612.0 30.8 272 51-373 1-278 (278)
3 2xok_G ATP synthase subunit ga 100.0 6.1E-83 2.1E-87 621.8 27.8 277 50-373 33-311 (311)
4 2ck3_G ATP synthase subunit ga 100.0 2.1E-82 7.1E-87 608.8 15.5 270 51-372 1-272 (272)
5 2qe7_G ATP synthase subunit ga 100.0 2.2E-85 7.6E-90 634.0 -9.2 286 50-373 1-286 (286)
6 1fs0_G ATP synthase gamma subu 100.0 1.1E-61 3.8E-66 455.2 26.0 230 68-333 1-230 (230)
7 2pk8_A Uncharacterized protein 52.3 18 0.00061 28.7 4.4 36 144-179 16-51 (103)
8 1qw2_A Conserved hypothetical 45.4 13 0.00044 29.9 2.7 41 129-180 32-74 (102)
9 3mtu_A Tropomyosin alpha-1 cha 44.7 36 0.0012 25.5 5.0 33 326-358 8-44 (75)
10 2jo8_A Serine/threonine-protei 34.1 71 0.0024 22.3 4.7 32 323-357 13-44 (51)
11 2xus_A Breast cancer metastasi 31.3 1.2E+02 0.0043 20.9 5.5 42 327-369 7-48 (49)
12 1oao_C CODH, carbon monoxide d 21.8 29 0.00099 36.6 1.3 22 131-152 519-541 (729)
No 1
>3oaa_G ATP synthase gamma chain; rossmann fold, hydrolase, hydrolase-transport PROT complex; HET: ANP ADP; 3.26A {Escherichia coli DH1}
Probab=100.00 E-value=7e-87 Score=644.39 Aligned_cols=286 Identities=35% Similarity=0.555 Sum_probs=260.6
Q ss_pred ccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCCcCCCCceEEEE
Q 017130 51 CGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIV 130 (376)
Q Consensus 51 a~lkeIk~RI~SVk~t~KITkAMkmVAaaKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~~I 130 (376)
|+||+||+||+||+||+|||+||||||+||+||||+++.+.|||++++.+++.++..... +.+||++..++++++++|
T Consensus 1 a~lkeIk~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~i~~~l~~l~~~~~--~~~~~~~~~~~~~~~~~I 78 (286)
T 3oaa_G 1 AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNL--EYKHPYLEDRDVKRVGYL 78 (286)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHT--TTCCSSCSCCCCSEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHhhCc--cccCcccccCCCCcEEEE
Confidence 589999999999999999999999999999999999999999999999999999977542 346899888888999999
Q ss_pred EEeCCCCCCccchHHHHHHHHHHHHHHhhCCCceEEEEeehhhHHHHhhcCCceeeEeecCCCCCCHHHHHHHHHHHHhh
Q 017130 131 IITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFSL 210 (376)
Q Consensus 131 VitSDrGLCG~fN~~Iik~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~~~~~~v~~~~~~~~~p~~~~a~~I~~~l~~~ 210 (376)
|||||||||||||+||+|.+.+.++++...|.++.+++||+||.+||++++...+..+.+.++.|++.++..|++.+++.
T Consensus 79 vitSDrGLcG~fN~ni~k~~~~~i~~~~~~~~~~~l~~vG~Kg~~~~~~~~~~i~~~~~~~~~~p~~~~~~~i~~~~~~~ 158 (286)
T 3oaa_G 79 VVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQA 158 (286)
T ss_dssp EECCSCCCSTTHHHHHHHHHHHHHHHHHTTTCEEEEEEESHHHHHHHHHHCCCEEEEECCCTTCCCHHHHHHHHHHHHHH
T ss_pred EEeCCcccccchhHHHHHHHHHHHHHHHhCCCceEEEEeeHHHHHHHHHcCCCeEEeeccccCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999988776777899999999999999988876666666778899999999999999999
Q ss_pred hhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCCCC
Q 017130 211 FVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSPL 290 (376)
Q Consensus 211 ~~~~e~d~v~viy~~f~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (376)
|.+|++|+|+|+||+|+|+++|+|++++|||+++.+ .++ . ...++.
T Consensus 159 ~~~g~~d~v~lvyn~f~s~~~q~~~~~~lLPl~~~~-------------~~~---~------------------~~~~~~ 204 (286)
T 3oaa_G 159 YDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASD-------------DDD---L------------------KHKSWD 204 (286)
T ss_dssp HHTTSCSEEEEEEEEEEETTEEEEEEEECSSCCCCH-------------HHH---S------------------CCCSCC
T ss_pred HhcCCCCEEEEEEcccccccccceeEEEecCCCccc-------------ccc---c------------------ccCCCC
Confidence 999999999999999999999999999999998621 000 0 001235
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHHh
Q 017130 291 MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAE 370 (376)
Q Consensus 291 ~~fEp~~~~il~~Llp~Yl~~~ly~al~ES~aSE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~EI~EIVsGAe 370 (376)
|+|||+++++|+.|+|.||+++||+||+||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|||+||+
T Consensus 205 ~~~Ep~~~~vl~~Llp~yl~~~iy~alles~aSE~aARm~AM~~At~NA~eli~~Ltl~yNr~RQa~IT~El~EIv~Ga~ 284 (286)
T 3oaa_G 205 YLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAA 284 (286)
T ss_dssp CEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh
Q 017130 371 AL 372 (376)
Q Consensus 371 Al 372 (376)
||
T Consensus 285 Al 286 (286)
T 3oaa_G 285 AV 286 (286)
T ss_dssp --
T ss_pred hC
Confidence 96
No 2
>3oee_G ATP synthase subunit gamma; ATP phosphatase, F1F0 ATPase, ATP synthesis, H ADP, PO4, mitochondria; HET: ANP; 2.74A {Saccharomyces cerevisiae} SCOP: c.49.2.0 PDB: 2wpd_G* 3fks_G 2hld_G* 3oeh_G* 3ofn_G* 3zry_G* 4b2q_G* 3oe7_G*
Probab=100.00 E-value=1.4e-82 Score=612.02 Aligned_cols=272 Identities=27% Similarity=0.407 Sum_probs=238.6
Q ss_pred ccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCCcCCC----Cce
Q 017130 51 CGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRP----VKK 126 (376)
Q Consensus 51 a~lkeIk~RI~SVk~t~KITkAMkmVAaaKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~----~k~ 126 (376)
|+|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++.+++.+.. .+|+ ..++ +++
T Consensus 1 a~lkeIk~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~~~~~~~~~~--------~~~l-~~~~~~~~~~~ 71 (278)
T 3oee_G 1 ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAE--------TKNL-DVEATETGAPK 71 (278)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------CCCC-----------C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhc--------cccc-ccccccccCCc
Confidence 58999999999999999999999999999999999999999999999999988831 1354 3343 688
Q ss_pred EEEEEEeCCCCCCccchHHHHHHHHHHHHHHhhCCCceEEEEeehhhHHHHhhcCC-ceeeEeecC-CCCCCHHHHHHHH
Q 017130 127 VAIVIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSN-VSVIRCIEG-EGFYTVKEAQTIA 204 (376)
Q Consensus 127 ~~~IVitSDrGLCG~fN~~Iik~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~~~~-~~v~~~~~~-~~~p~~~~a~~I~ 204 (376)
+++||||||||||||||+||+|.+.+.+++. + ++.+++||+||.+||++++. ..+..+.++ .+.|+|+++..|+
T Consensus 72 ~~~IvitSDrGLcG~fN~ni~k~~~~~~~~~---~-~~~l~~vG~Kg~~~~~~~~~~~i~~~~~~~~~~~p~~~~a~~i~ 147 (278)
T 3oee_G 72 ELIVAITSDKGLCGSIHSQLAKAVRRHLNDQ---P-NADIVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIA 147 (278)
T ss_dssp EEEEEECCSCCCSTTHHHHHHHHHHHHTTSC---T-TCEEEEESHHHHHHHHHHCTTTEEEEECSCSSSCCCHHHHHHHH
T ss_pred EEEEEEeCCccccchhhHHHHHHHHHHHHhc---C-CeEEEEEehHHHHHHHHcCCCceEEeeccCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999877643 3 58899999999999987643 345556566 4799999999999
Q ss_pred HHHHhhhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhcccccccc
Q 017130 205 DNVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNK 284 (376)
Q Consensus 205 ~~l~~~~~~~e~d~v~viy~~f~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (376)
+.+++.|..|++|+|+|+||+|+|+++|+|++++|||+++.+ +
T Consensus 148 ~~i~~~~~~g~~d~v~ivyn~f~s~~~q~~~~~~llP~~~~~---------------~---------------------- 190 (278)
T 3oee_G 148 DKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIE---------------Q---------------------- 190 (278)
T ss_dssp HHHHHTTCGGGCSEEEEEEEEECSSSCEEEEEEEECCHHHHH---------------S----------------------
T ss_pred HHHHHHHhcCCCcEEEEEecccccceeeeeEEEecCCCCccc---------------c----------------------
Confidence 999999999999999999999999999999999999986410 0
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 017130 285 GELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLE 364 (376)
Q Consensus 285 ~~~~~~~~fEp~~~~il~~Llp~Yl~~~ly~al~ES~aSE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~EI~E 364 (376)
....+.|+|||+ +++|+.|+|.||+++||+||+||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|
T Consensus 191 ~~~~~~y~~eP~-~~vl~~Llp~yl~~~iy~alles~aSE~aARm~AM~~AtdNA~eli~~Ltl~yNr~RQa~IT~El~E 269 (278)
T 3oee_G 191 SPSFGKFEIDTD-ANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVD 269 (278)
T ss_dssp CTTSTTSCCCSS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCceecCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 001246889999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHhhhh
Q 017130 365 IVAGAEALT 373 (376)
Q Consensus 365 IVsGAeAl~ 373 (376)
||+||+||+
T Consensus 270 Iv~Ga~Al~ 278 (278)
T 3oee_G 270 IITGASSLG 278 (278)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHhcC
Confidence 999999984
No 3
>2xok_G ATP synthase subunit gamma, mitochondrial; hydrolase, ATP-binding, F(O), F(1), mitochondr inner membrane, transmembrane; HET: ANP; 3.01A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-83 Score=621.81 Aligned_cols=277 Identities=27% Similarity=0.389 Sum_probs=239.3
Q ss_pred cccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCCcCCCCceEEE
Q 017130 50 RCGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAI 129 (376)
Q Consensus 50 ~a~lkeIk~RI~SVk~t~KITkAMkmVAaaKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~~ 129 (376)
|++|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++++++.++..... +...||+ +++++++
T Consensus 33 MaslkeIk~RI~Svk~t~KITkAMkmVAasKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~-~~~~~p~----~~k~~~~ 107 (311)
T 2xok_G 33 YATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETKNL-DVEATET----GAPKELI 107 (311)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTHHHHHHHHHHHTTCCC----------------CEEE
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcc-ccccCCc----ccCceEE
Confidence 5899999999999999999999999999999999999999999999999999999865321 1124566 2577899
Q ss_pred EEEeCCCCCCccchHHHHHHHHHHHHHHhhCCCceEEEEeehhhHHHHhhc-CCceeeEeecCCC-CCCHHHHHHHHHHH
Q 017130 130 VIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHR-SNVSVIRCIEGEG-FYTVKEAQTIADNV 207 (376)
Q Consensus 130 IVitSDrGLCG~fN~~Iik~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~~-~~~~v~~~~~~~~-~p~~~~a~~I~~~l 207 (376)
||||||||||||||+||+|.+.+.+++ ..|++ +++||+||.+||+++ +......+.+.++ .|+|+++..|++.+
T Consensus 108 IvitSDrGLCG~fNsni~k~~~~~i~~--~~g~~--l~~VG~Kg~~~~~~~~~~~i~~~~~~~~~~~p~~~~a~~i~~~i 183 (311)
T 2xok_G 108 VAITSDKGLCGSIHSQLAKAVRRHLND--QPNAD--IVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKL 183 (311)
T ss_dssp EEECCSCCSSTTHHHHHHHHHHHSSSS--CTTCE--EEEESHHHHHHHHTTSTTTEEEEEESCTTSCCCHHHHHHHHHHH
T ss_pred EEEeCCCcccchhhHHHHHHHHHHHHh--cCCCE--EEEechHHHHHHHHhcCCCeEEEecccCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999887654 33544 999999999999984 6555556666776 89999999999999
Q ss_pred HhhhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCC
Q 017130 208 FSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGEL 287 (376)
Q Consensus 208 ~~~~~~~e~d~v~viy~~f~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (376)
++.|.+|++|+|+|+||+|+|+++|+|++++|||++.. ++. + .
T Consensus 184 ~~~~~~g~~d~v~lvYn~f~s~~~q~p~~~~lLPl~~~--------------~~~--------------------~--~- 226 (311)
T 2xok_G 184 LSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTI--------------EQS--------------------P--S- 226 (311)
T ss_dssp HHTTCCTTCSEEEEEEEECSSSSCCEEEEEEECCHHHH--------------HHS--------------------G--G-
T ss_pred HHHHhcCCcceEEEEeeccccceeeeEEEEEccCCccc--------------ccc--------------------c--C-
Confidence 99999999999999999999999999999999998530 000 0 0
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Q 017130 288 SPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVA 367 (376)
Q Consensus 288 ~~~~~fEp~~~~il~~Llp~Yl~~~ly~al~ES~aSE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~EI~EIVs 367 (376)
.++|+||| ++++|+.|+|.||+++||+|++||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|||+
T Consensus 227 ~~~y~~EP-~e~vL~~Llp~yl~~~iy~allEs~ASE~aARm~AM~~AtdNA~eli~~Ltl~yNraRQa~IT~EL~EIVs 305 (311)
T 2xok_G 227 FGKFEIDT-DANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIIT 305 (311)
T ss_dssp GGGSCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 02578999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhh
Q 017130 368 GAEALT 373 (376)
Q Consensus 368 GAeAl~ 373 (376)
||+||+
T Consensus 306 Ga~Al~ 311 (311)
T 2xok_G 306 GASSLG 311 (311)
T ss_dssp HHHC--
T ss_pred HHHhcC
Confidence 999983
No 4
>2ck3_G ATP synthase subunit gamma\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: c.49.2.1 PDB: 1cow_G* 1bmf_G* 1e1q_G* 1e1r_G* 1efr_G* 1e79_G* 1h8h_G* 1nbm_G* 1ohh_G* 1qo1_G 1w0j_G* 1w0k_G* 1h8e_G* 2jiz_G* 2jj1_G* 2jj2_G* 2v7q_G* 2wss_G* 2xnd_G* 2w6j_G ...
Probab=100.00 E-value=2.1e-82 Score=608.80 Aligned_cols=270 Identities=29% Similarity=0.448 Sum_probs=175.6
Q ss_pred ccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCCcCCCCceEEEE
Q 017130 51 CGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIV 130 (376)
Q Consensus 51 a~lkeIk~RI~SVk~t~KITkAMkmVAaaKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~~I 130 (376)
++|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++.+++.++- ..|| ++++++++|
T Consensus 1 a~lkeIk~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~~~~~~~~~~-------~~~~----~~~k~~~~i 69 (272)
T 2ck3_G 1 ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKAD-------IKTP----EDKKKHLII 69 (272)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------------------------CCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHhcc-------ccCc----cccCceEEE
Confidence 47999999999999999999999999999999999999999999999999988761 1234 345778999
Q ss_pred EEeCCCCCCccchHHHHHHHHHHHHHHhhCCCceEEEEeehhhHHHHhh-cCCceeeEeecCCC-CCCHHHHHHHHHHHH
Q 017130 131 IITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRH-RSNVSVIRCIEGEG-FYTVKEAQTIADNVF 208 (376)
Q Consensus 131 VitSDrGLCG~fN~~Iik~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~-~~~~~v~~~~~~~~-~p~~~~a~~I~~~l~ 208 (376)
|||||||||||||+||+|.+.+.++++...|+++.+++||+||.+||++ ++...+..+.++++ .|+|+++..|+++++
T Consensus 70 vitSDrGLcG~~Nsni~k~~~~~~~~~~~~g~~~~l~~vG~K~~~~~~~~~~~~i~~~~~~~~~~~p~~~~a~~i~~~~~ 149 (272)
T 2ck3_G 70 GVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELL 149 (272)
T ss_dssp CBCCSCCCSSSSHHHHC------------------CCCBSHHHHHHC----------CBCSCSSSCCCHHHHHHHHHHC-
T ss_pred EEeCCccccccccHHHHHHHHHHHHHhhccCCceEEEEecHHHHHHHHhccCCceeeeecccCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999988777677788999999999999995 55444445666777 599999999999999
Q ss_pred hhhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCC
Q 017130 209 SLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELS 288 (376)
Q Consensus 209 ~~~~~~e~d~v~viy~~f~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (376)
+ ..+++|+|+|+||+|+|+++|+|++.+|||+++.+ .. +
T Consensus 150 ~--~~~~~d~v~ivyn~f~s~~~q~p~~~~lLPl~~~~--------------~~-------------------------~ 188 (272)
T 2ck3_G 150 N--SGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS--------------SA-------------------------E 188 (272)
T ss_dssp -----------CCCCCEECSSSCEECC-----------------------------------------------------
T ss_pred H--ccCCCceEEEEeeccccccceeeeeeeccCCCccc--------------cc-------------------------c
Confidence 8 35799999999999999999999999999996411 00 0
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhH
Q 017130 289 PLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAG 368 (376)
Q Consensus 289 ~~~~fEp~~~~il~~Llp~Yl~~~ly~al~ES~aSE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~EI~EIVsG 368 (376)
.+|+|||+++++|+.|+|.|+.++||+||+||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|||+|
T Consensus 189 ~~~~~Ep~~~~vl~~llp~y~~~~iy~alles~aSE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~El~EIv~G 268 (272)
T 2ck3_G 189 SMSIYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISG 268 (272)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 14679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 017130 369 AEAL 372 (376)
Q Consensus 369 AeAl 372 (376)
|+||
T Consensus 269 a~Al 272 (272)
T 2ck3_G 269 AAAL 272 (272)
T ss_dssp HC--
T ss_pred HhhC
Confidence 9996
No 5
>2qe7_G ATP synthase subunit gamma; blockage of ATP hydrolysis, F1-ATPase, single analysis, thermoalkaliphilic, hydrolase; 3.06A {Bacillus SP}
Probab=100.00 E-value=2.2e-85 Score=634.03 Aligned_cols=286 Identities=37% Similarity=0.595 Sum_probs=213.4
Q ss_pred cccHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCCcCCCCceEEE
Q 017130 50 RCGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAI 129 (376)
Q Consensus 50 ~a~lkeIk~RI~SVk~t~KITkAMkmVAaaKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~~ 129 (376)
|++|++||+||+||+||+|||+||||||+||+||||+++.+.|||++++++++.++..... +..||++..+++++++|
T Consensus 1 Ma~lkeik~RI~Svk~t~kITkAMkmVAaaKlrkaq~~~~~~rpY~~~~~~~l~~l~~~~~--~~~~~~~~~~~~k~~~~ 78 (286)
T 2qe7_G 1 MQGMREIKRRIRSVKNTRQITKAMKMVAAAKLRRAQETAENARPYADKIKEVISSIAAGTK--DFSHPMLEARPVKKTGY 78 (286)
T ss_dssp --CCSSSSHHHHHHHHHHHHHHHHHHHHHHHTTSTTTSSSSSSSSTTCC----------------CCSSCSCCCCSSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc--cccCccccccccCcEEE
Confidence 4899999999999999999999999999999999999999999999999999999976432 34678887777788999
Q ss_pred EEEeCCCCCCccchHHHHHHHHHHHHHHhhCCCceEEEEeehhhHHHHhhcCCceeeEeecCCCCCCHHHHHHHHHHHHh
Q 017130 130 VIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFS 209 (376)
Q Consensus 130 IVitSDrGLCG~fN~~Iik~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~~~~~~v~~~~~~~~~p~~~~a~~I~~~l~~ 209 (376)
||||||||||||||+||+|.+.+.++++...|+++.+++||+||.+||++++...+..+.+.++.|+++++..|++.+++
T Consensus 79 IvitsDrGLcG~~N~ni~k~~~~~i~~~~~~~~~~~~~~iG~Kg~~~~~~~~~~i~~~~~~~~~~p~~~~a~~i~~~i~~ 158 (286)
T 2qe7_G 79 MVITSDRGLAGPYNANILRLVSKTIEERHQSKDEYVIFAVGRKGRDFFKKRGYPVVEEVTGISDTPSLTEIQDIAQSAIG 158 (286)
T ss_dssp CCCCCTTCCCTHHHHHHHTGGGTTTTSSCTTSSCCCCCCCSHHHHHHHHSSSSCCSCCCSCCCSSCCSTTTHHHHHHHHH
T ss_pred EEEeCCCCcccchhHHHHHHHHHHHHHhhccCCceEEEEechHHHHHHHHcCCCceeeeccCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999988887666667788899999999999998875555455566778999999999999999
Q ss_pred hhhcCCccEEEEEeecccccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCCC
Q 017130 210 LFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSP 289 (376)
Q Consensus 210 ~~~~~e~d~v~viy~~f~s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (376)
.|..|++|+|+||||+|+|+++|+|++++|||++..+ .++ . . .+
T Consensus 159 ~~~~~~~d~v~lvyn~f~s~~~q~~~~~~lLP~~~~~-------------~~~--------------------~--~-~~ 202 (286)
T 2qe7_G 159 MFADETFDKLTIFYNEFVSPIVQRPVEKQLLPLTSEE-------------VLD--------------------G--P-VS 202 (286)
T ss_dssp HHSSSSCSCCCCCCCCCSBTTBCCCCCCCCSSCCC---------------------------------------------
T ss_pred HHhcCCcceEEEEEeecccceeeeeEEEEecCCCccc-------------ccc--------------------c--c-CC
Confidence 9999999999999999999999999999999996411 000 0 0 12
Q ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 017130 290 LMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 369 (376)
Q Consensus 290 ~~~fEp~~~~il~~Llp~Yl~~~ly~al~ES~aSE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~EI~EIVsGA 369 (376)
.|+|||+++++|+.|+|.||+++||+|++||.||||+|||+||++|||||+|||++|+++|||+||++||+||+|||+||
T Consensus 203 ~y~~Ep~~~~vl~~Ll~~yl~~~iy~al~Es~asE~aaRm~AM~~At~Na~eli~~L~l~yNr~RQa~IT~El~EIv~Ga 282 (286)
T 2qe7_G 203 AYEYEPDSESVLEVLLPKYAETLIYSALLDAKASEFGARMTAMGNATDNATEMLETLTLQFNRARQAAITQEIAEIVAGA 282 (286)
T ss_dssp --------------CCCTTSSHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSCC----------------
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhh
Q 017130 370 EALT 373 (376)
Q Consensus 370 eAl~ 373 (376)
+||+
T Consensus 283 ~Al~ 286 (286)
T 2qe7_G 283 NALR 286 (286)
T ss_dssp ----
T ss_pred HHcC
Confidence 9984
No 6
>1fs0_G ATP synthase gamma subunit; coiled coil, epsilon, hydrolase; 2.10A {Escherichia coli} SCOP: c.49.2.1
Probab=100.00 E-value=1.1e-61 Score=455.18 Aligned_cols=230 Identities=31% Similarity=0.509 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcccCCCCCCCCcCCCCceEEEEEEeCCCCCCccchHHHH
Q 017130 68 KITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIVIITGDRGLCGGFNKAVI 147 (376)
Q Consensus 68 KITkAMkmVAaaKlrkaq~~~~~~rpY~~~l~~vl~~l~~~~~~~~~~~pl~~~~~~k~~~~IVitSDrGLCG~fN~~Ii 147 (376)
|||+||||||+||+||||+++.+.|||++++++++.++..... +..||++..++++++++||||||||||||||+||+
T Consensus 1 KITkAMkmVAasKlrkaq~~~~~~rpY~~~~~~~l~~l~~~~~--~~~~p~~~~r~~k~~~~IvitSDrGLcG~~Nsni~ 78 (230)
T 1fs0_G 1 KITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNL--EYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLF 78 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCCGGGSCCCCSEEEEEEECCSSSCSTTHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHhcCc--ccCCccccccccCcEEEEEEeCCccccccccHHHH
Confidence 7999999999999999999999999999999999999986432 34688887777889999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCceEEEEeehhhHHHHhhcCCceeeEeecCCCCCCHHHHHHHHHHHHhhhhcCCccEEEEEeeccc
Q 017130 148 KKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFSLFVSEEVDKVELVYTKFV 227 (376)
Q Consensus 148 k~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~~~~~~v~~~~~~~~~p~~~~a~~I~~~l~~~~~~~e~d~v~viy~~f~ 227 (376)
|.+.+.++++...|+++.+++||+||.+||+++|......+.+.++.|+++++..|++.+++.|.+|++|+|+|+||+|+
T Consensus 79 k~~~~~i~~~~~~g~~~~l~~vG~Kg~~~~~~~~~~i~~~~~~~~~~p~~~~a~~i~~~i~~~~~~g~~d~v~lvYn~f~ 158 (230)
T 1fs0_G 79 KKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFI 158 (230)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEESHHHHHHHHHHCCCEEEEECCCTTCCCSHHHHHHHHHHHHHHHTTSCSCEEEEEEEEE
T ss_pred HHHHHHHHHhhcCCCcEEEEEEeHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHHHHhcCCCcEEEEEEeeec
Confidence 99999998887788889999999999999999876555556567789999999999999999999999999999999999
Q ss_pred ccccccceeeeeecCccCccccccCCcccchhhhhHhhhhcccccchhhccccccccCCCCCCccccCCHHHHHHHHHHH
Q 017130 228 SLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPL 307 (376)
Q Consensus 228 s~~~q~p~~~~LLPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fEp~~~~il~~Llp~ 307 (376)
|+++|+|++++|||++..+ .++ . .. . .+.|+|||+++++|+.|+|.
T Consensus 159 s~~~q~p~~~~lLP~~~~~-------------~~~----------~--------~~--~-~~~y~~Ep~~~~vl~~Llp~ 204 (230)
T 1fs0_G 159 NTMSQVPTISQLLPLPASD-------------DDD----------L--------KH--K-SWDYLYEPDPKALLDTLLRR 204 (230)
T ss_dssp ETTEEEEEEEEEESCC--------------------------------------CC--C-SCCCEEESCHHHHHHHHHHH
T ss_pred ccEEeeEEEEEecCCChhh-------------ccc----------c--------cc--c-CCCeEecCCHHHHHHHHHHH
Confidence 9999999999999996411 000 0 00 0 12578999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017130 308 YMNSQILRALQESFASEVAARMSAMS 333 (376)
Q Consensus 308 Yl~~~ly~al~ES~aSE~aARm~AM~ 333 (376)
||+++||+|++||.||||+|||+||+
T Consensus 205 yl~~~iy~alles~aSE~aARm~AM~ 230 (230)
T 1fs0_G 205 YVESQVYQGVVENLASEQAARMVAMK 230 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999995
No 7
>2pk8_A Uncharacterized protein PF0899; structural genomics, uncharacte protein, PSI, protein structure initiative; 1.85A {Pyrococcus furiosus dsm 3638} SCOP: d.274.1.1
Probab=52.28 E-value=18 Score=28.65 Aligned_cols=36 Identities=22% Similarity=0.408 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhCCCceEEEEeehhhHHHHhh
Q 017130 144 KAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRH 179 (376)
Q Consensus 144 ~~Iik~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~ 179 (376)
.+|+..+++.+++++..|-++.++.+|.-.+.|++.
T Consensus 16 irIl~~ieekinELk~dG~ePDIiL~G~eayef~~e 51 (103)
T 2pk8_A 16 IRILGEIEEKMNELKMDGFNPDIILFGREAYNFLSN 51 (103)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEcHHHHHHHHH
Confidence 467778888899999999999999999999999985
No 8
>1qw2_A Conserved hypothetical protein TA1206; structural genomics, beta/alpha, antiparallel beta sandwich, protein structure initiative; 1.50A {Thermoplasma acidophilum} SCOP: d.249.1.1
Probab=45.44 E-value=13 Score=29.87 Aligned_cols=41 Identities=29% Similarity=0.475 Sum_probs=31.0
Q ss_pred EEEEeCCCCC--CccchHHHHHHHHHHHHHHhhCCCceEEEEeehhhHHHHhhc
Q 017130 129 IVIITGDRGL--CGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHR 180 (376)
Q Consensus 129 ~IVitSDrGL--CG~fN~~Iik~~~~~i~~~~~~g~~~~li~VG~Kg~~~~~~~ 180 (376)
+++|.+|+|+ ||.+|-....++ + ++...++|-+..+-+-..
T Consensus 32 Ll~i~~~kG~imCGalDv~~~ekl----------~-~~Aarv~GV~t~edlL~a 74 (102)
T 1qw2_A 32 LLFIKGSKGYAMCGYLNMETSNKV----------G-DIAVRVMGVKTLDDMLSA 74 (102)
T ss_dssp EEEEECSSCEEECTTCCHHHHHHT----------T-CCEEECCSCCSHHHHHHS
T ss_pred EEEEEeCceEEEecccChhHHHhh----------c-cceEEEEccCCHHHHhhC
Confidence 7789999996 999998874321 2 366777899988876653
No 9
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=44.72 E-value=36 Score=25.53 Aligned_cols=33 Identities=12% Similarity=0.241 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHH----HHHHhHHHHH
Q 017130 326 AARMSAMSTATDNADELKKNLSV----AYNQERQAKI 358 (376)
Q Consensus 326 aARm~AM~~AtdNA~eli~~L~l----~yNr~RQa~I 358 (376)
.-.|.+|+.=.+|+.+.++.|.. -|+++|+..|
T Consensus 8 KkkmqaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~ 44 (75)
T 3mtu_A 8 KKKMQMLKLDKENALDRAEQAEADKDFYFGKLRNIEL 44 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 35788899999999999999987 6889998755
No 10
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=34.10 E-value=71 Score=22.30 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhHHHH
Q 017130 323 SEVAARMSAMSTATDNADELKKNLSVAYNQERQAK 357 (376)
Q Consensus 323 SE~aARm~AM~~AtdNA~eli~~L~l~yNr~RQa~ 357 (376)
-|...|+.+.+.+- +.=|++|...|.+.||--
T Consensus 13 eEL~~rl~~Ld~~M---e~Ei~elr~RY~~KRqPI 44 (51)
T 2jo8_A 13 EDLQKRLLALDPMM---EQEIEEIRQKYQSKRQPI 44 (51)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHH---HHHHHHHHHHHHHhHhhH
Confidence 35666766666554 445899999999999963
No 11
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=31.27 E-value=1.2e+02 Score=20.88 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 017130 327 ARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 369 (376)
Q Consensus 327 ARm~AM~~AtdNA~eli~~L~l~yNr~RQa~IT~EI~EIVsGA 369 (376)
-|+.||+.=+ ++++--..|.-++=+-|-+.|-.||.||-+|-
T Consensus 7 rr~e~ld~l~-~LEkqF~~LkEqlY~ERl~ql~~~Leel~~g~ 48 (49)
T 2xus_A 7 RRSECVSEML-DLEKQFSELKEKLFRERLSQLRLRLEEVGAER 48 (49)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3566666543 46666777888888999999999999998873
No 12
>1oao_C CODH, carbon monoxide dehydrogenase/acetyl-COA synthase alpha; oxidoreductase-transferase complex, electron transfer, oxidoreductase; 1.90A {Moorella thermoacetica} SCOP: e.26.1.3 PDB: 2z8y_M 3i01_M 3i04_M 1mjg_M 1ru3_A 3git_A 3s2x_A
Probab=21.76 E-value=29 Score=36.60 Aligned_cols=22 Identities=36% Similarity=0.596 Sum_probs=17.6
Q ss_pred EEeCCC-CCCccchHHHHHHHHH
Q 017130 131 IITGDR-GLCGGFNKAVIKKAEN 152 (376)
Q Consensus 131 VitSDr-GLCG~fN~~Iik~~~~ 152 (376)
|||.|| ||||++|=-=.|.+-+
T Consensus 519 vvtPeR~~lCGaisWlDaKAa~e 541 (729)
T 1oao_C 519 IVTPERVGLCGAVSWLDAKASYE 541 (729)
T ss_dssp EEBTTBCCTTSCCCHHHHHHHHH
T ss_pred EECCCCcccccccchhhhhhhhc
Confidence 589998 9999999776666543
Done!