Query 017139
Match_columns 376
No_of_seqs 265 out of 2528
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 05:57:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017139.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017139hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0658 Glycogen synthase kina 100.0 8.9E-72 1.9E-76 485.8 27.3 360 14-374 4-363 (364)
2 KOG0661 MAPK related serine/th 100.0 1.1E-61 2.3E-66 433.9 16.0 283 32-324 8-298 (538)
3 KOG0593 Predicted protein kina 100.0 8.3E-61 1.8E-65 405.8 18.6 282 34-325 2-292 (396)
4 KOG0660 Mitogen-activated prot 100.0 1.1E-59 2.3E-64 409.5 22.7 321 34-367 22-354 (359)
5 KOG0615 Serine/threonine prote 100.0 1.3E-59 2.7E-64 413.8 15.1 258 32-324 170-444 (475)
6 KOG0659 Cdk activating kinase 100.0 2.7E-58 5.8E-63 384.1 22.2 279 34-323 2-287 (318)
7 KOG0598 Ribosomal protein S6 k 100.0 3.6E-58 7.9E-63 401.4 21.3 258 30-327 21-291 (357)
8 KOG0575 Polo-like serine/threo 100.0 1.6E-57 3.5E-62 419.3 25.9 253 29-323 14-275 (592)
9 PTZ00036 glycogen synthase kin 100.0 1.5E-56 3.3E-61 427.7 32.6 330 32-362 64-398 (440)
10 KOG0663 Protein kinase PITSLRE 100.0 1E-57 2.2E-62 391.9 21.2 285 31-323 73-367 (419)
11 KOG0600 Cdc2-related protein k 100.0 2.7E-57 5.9E-62 408.4 22.9 285 29-322 112-405 (560)
12 KOG0592 3-phosphoinositide-dep 100.0 8.9E-57 1.9E-61 408.2 22.6 256 31-327 70-348 (604)
13 KOG0581 Mitogen-activated prot 100.0 1.6E-56 3.4E-61 391.2 19.2 255 34-327 79-345 (364)
14 KOG0616 cAMP-dependent protein 100.0 2.4E-55 5.1E-60 371.7 19.7 256 29-327 39-307 (355)
15 KOG0594 Protein kinase PCTAIRE 100.0 6.8E-54 1.5E-58 374.3 23.9 291 33-327 10-312 (323)
16 KOG0605 NDR and related serine 100.0 6.8E-54 1.5E-58 389.5 22.7 268 32-338 139-465 (550)
17 KOG0694 Serine/threonine prote 100.0 8E-54 1.7E-58 399.3 21.6 284 30-354 364-669 (694)
18 KOG0588 Serine/threonine prote 100.0 1.3E-53 2.9E-58 395.3 22.3 251 36-326 14-272 (786)
19 KOG0595 Serine/threonine-prote 100.0 2.1E-53 4.6E-58 374.8 20.9 256 30-322 6-273 (429)
20 KOG0667 Dual-specificity tyros 100.0 1.6E-52 3.6E-57 390.2 24.0 278 35-324 187-509 (586)
21 KOG0591 NIMA (never in mitosis 100.0 1.3E-54 2.9E-59 364.6 8.9 256 32-325 17-284 (375)
22 KOG0033 Ca2+/calmodulin-depend 100.0 2.2E-54 4.7E-59 356.7 9.2 260 31-326 8-276 (355)
23 KOG0583 Serine/threonine prote 100.0 4.3E-52 9.2E-57 383.6 24.7 253 31-322 14-280 (370)
24 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-50 3.2E-55 366.8 28.2 278 32-320 3-288 (288)
25 KOG0610 Putative serine/threon 100.0 1.9E-51 4.2E-56 362.6 21.1 276 32-343 75-418 (459)
26 KOG0198 MEKK and related serin 100.0 2.8E-51 6.1E-56 363.9 19.1 259 33-325 16-284 (313)
27 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-50 2.3E-55 363.1 19.6 258 31-323 94-378 (576)
28 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.8E-49 3.9E-54 367.9 28.6 318 35-361 1-332 (338)
29 KOG0597 Serine-threonine prote 100.0 6.2E-51 1.3E-55 371.1 17.4 249 34-323 2-257 (808)
30 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-49 4.2E-54 362.1 27.3 283 33-325 4-296 (303)
31 KOG0582 Ste20-like serine/thre 100.0 2.7E-49 5.8E-54 351.8 24.4 276 23-326 15-302 (516)
32 KOG0578 p21-activated serine/t 100.0 3.3E-50 7.2E-55 368.1 18.4 250 34-322 273-528 (550)
33 KOG0662 Cyclin-dependent kinas 100.0 6.3E-50 1.4E-54 316.1 17.0 278 35-323 3-289 (292)
34 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-48 2.6E-53 354.1 27.6 276 34-320 1-287 (287)
35 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-48 2.7E-53 354.5 26.9 280 34-320 1-290 (290)
36 cd07876 STKc_JNK2 Catalytic do 100.0 2E-48 4.4E-53 363.7 28.2 287 31-326 18-324 (359)
37 cd07875 STKc_JNK1 Catalytic do 100.0 3.4E-48 7.4E-53 362.8 29.5 288 31-327 21-328 (364)
38 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.9E-48 8.5E-53 354.5 27.8 283 32-325 4-294 (309)
39 KOG0032 Ca2+/calmodulin-depend 100.0 2.7E-48 5.8E-53 358.1 26.0 260 29-325 30-301 (382)
40 cd07853 STKc_NLK Catalytic dom 100.0 4.9E-48 1.1E-52 362.8 27.9 283 35-323 1-294 (372)
41 KOG0599 Phosphorylase kinase g 100.0 2.6E-50 5.6E-55 337.5 10.5 260 34-329 17-295 (411)
42 cd07874 STKc_JNK3 Catalytic do 100.0 7.9E-48 1.7E-52 359.2 28.4 287 31-326 14-320 (355)
43 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-47 2.5E-52 347.8 27.5 279 35-320 1-288 (288)
44 cd05612 STKc_PRKX_like Catalyt 100.0 2.1E-48 4.6E-53 353.2 22.1 250 34-326 1-263 (291)
45 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.2E-47 4.9E-52 348.2 28.1 285 31-326 3-295 (301)
46 PTZ00263 protein kinase A cata 100.0 5E-48 1.1E-52 356.6 23.8 253 31-326 15-280 (329)
47 KOG0611 Predicted serine/threo 100.0 6.5E-49 1.4E-53 345.3 15.1 249 32-321 51-307 (668)
48 KOG0580 Serine/threonine prote 100.0 8.8E-49 1.9E-53 322.6 14.6 252 32-323 20-279 (281)
49 cd05571 STKc_PKB Catalytic dom 100.0 4.5E-48 9.9E-53 356.1 21.2 246 40-326 1-260 (323)
50 cd05631 STKc_GRK4 Catalytic do 100.0 1.4E-47 3E-52 346.8 23.7 257 35-326 1-270 (285)
51 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.1E-47 6.7E-52 353.6 26.6 285 33-327 14-308 (343)
52 KOG4717 Serine/threonine prote 100.0 2E-48 4.4E-53 351.2 17.8 263 27-327 11-280 (864)
53 KOG0690 Serine/threonine prote 100.0 5.6E-49 1.2E-53 336.9 12.9 256 32-327 166-434 (516)
54 PHA03212 serine/threonine kina 100.0 1.6E-47 3.4E-52 360.2 24.0 278 33-326 91-385 (391)
55 cd05628 STKc_NDR1 Catalytic do 100.0 3.6E-47 7.8E-52 355.7 24.5 256 34-327 1-303 (363)
56 cd07868 STKc_CDK8 Catalytic do 100.0 8.5E-47 1.8E-51 346.9 26.6 278 39-320 6-317 (317)
57 KOG0666 Cyclin C-dependent kin 100.0 1.6E-48 3.5E-53 332.2 13.6 289 31-325 21-345 (438)
58 PTZ00426 cAMP-dependent protei 100.0 2.2E-47 4.9E-52 353.3 22.2 252 32-326 28-293 (340)
59 cd07839 STKc_CDK5 Catalytic do 100.0 1.4E-46 3E-51 340.1 26.4 276 35-320 1-284 (284)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.4E-47 9.6E-52 351.1 22.8 258 34-326 1-266 (333)
61 KOG0604 MAP kinase-activated p 100.0 4.3E-48 9.2E-53 328.0 14.6 264 31-325 58-330 (400)
62 cd05599 STKc_NDR_like Catalyti 100.0 3.9E-47 8.4E-52 355.8 22.4 255 34-326 1-305 (364)
63 cd05629 STKc_NDR_like_fungal C 100.0 4.9E-47 1.1E-51 356.6 22.3 255 34-326 1-314 (377)
64 cd07849 STKc_ERK1_2_like Catal 100.0 5.4E-46 1.2E-50 344.3 28.2 320 32-362 3-334 (336)
65 PTZ00284 protein kinase; Provi 100.0 2.6E-46 5.6E-51 360.8 26.7 282 33-325 128-446 (467)
66 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-46 3.6E-51 353.4 24.6 255 35-326 2-314 (381)
67 cd07861 STKc_CDK1_euk Catalyti 100.0 4.2E-46 9.2E-51 337.0 26.1 276 35-320 1-285 (285)
68 cd05573 STKc_ROCK_NDR_like Cat 100.0 7E-47 1.5E-51 352.3 21.4 256 34-327 1-295 (350)
69 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6E-46 1.3E-50 344.1 27.3 320 33-363 4-333 (337)
70 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-46 3.9E-51 351.4 24.1 259 31-326 40-313 (370)
71 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-46 2.5E-51 345.1 21.9 243 42-325 1-255 (312)
72 cd05625 STKc_LATS1 Catalytic d 100.0 1.4E-46 3E-51 354.2 22.9 254 35-326 2-314 (382)
73 KOG0589 Serine/threonine prote 100.0 1.9E-47 4.1E-52 347.8 16.3 254 33-323 3-264 (426)
74 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-45 3E-50 343.8 29.0 286 32-326 14-320 (353)
75 cd05598 STKc_LATS Catalytic do 100.0 7.5E-47 1.6E-51 355.3 20.5 254 35-326 2-310 (376)
76 cd05590 STKc_nPKC_eta Catalyti 100.0 2E-46 4.3E-51 344.6 22.9 246 40-326 1-262 (320)
77 cd05621 STKc_ROCK2 Catalytic d 100.0 3.9E-46 8.5E-51 348.7 25.2 258 31-325 40-312 (370)
78 cd05593 STKc_PKB_gamma Catalyt 100.0 1.2E-46 2.7E-51 347.1 21.5 246 40-326 1-260 (328)
79 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-46 2.9E-51 347.5 21.6 258 34-327 1-273 (330)
80 cd05595 STKc_PKB_beta Catalyti 100.0 1.4E-46 3.1E-51 346.0 21.1 246 40-326 1-260 (323)
81 cd05587 STKc_cPKC Catalytic do 100.0 3.9E-46 8.5E-51 343.4 23.6 251 35-326 1-266 (324)
82 cd05605 STKc_GRK4_like Catalyt 100.0 9.1E-46 2E-50 334.9 24.5 257 35-326 1-270 (285)
83 cd07845 STKc_CDK10 Catalytic d 100.0 4.5E-45 9.7E-50 334.3 28.9 286 32-326 5-299 (309)
84 cd05589 STKc_PKN Catalytic dom 100.0 5.7E-46 1.2E-50 342.3 23.1 249 36-326 1-266 (324)
85 cd07867 STKc_CDC2L6 Catalytic 100.0 2.3E-45 4.9E-50 337.4 26.7 278 39-320 6-317 (317)
86 cd05608 STKc_GRK1 Catalytic do 100.0 8.2E-46 1.8E-50 334.4 23.2 252 42-326 1-266 (280)
87 cd05614 STKc_MSK2_N N-terminal 100.0 3.2E-46 7E-51 345.2 20.6 256 35-326 1-276 (332)
88 cd05591 STKc_nPKC_epsilon Cata 100.0 5.3E-46 1.1E-50 342.1 21.7 246 40-326 1-263 (321)
89 cd07837 STKc_CdkB_plant Cataly 100.0 4.7E-45 1E-49 331.8 27.7 286 34-321 1-295 (295)
90 cd05616 STKc_cPKC_beta Catalyt 100.0 8.1E-46 1.8E-50 341.2 22.9 251 35-326 1-266 (323)
91 cd05594 STKc_PKB_alpha Catalyt 100.0 2.9E-46 6.3E-51 344.5 19.6 247 40-326 1-261 (325)
92 PHA03209 serine/threonine kina 100.0 1.1E-45 2.4E-50 344.6 23.6 278 33-323 65-357 (357)
93 cd05627 STKc_NDR2 Catalytic do 100.0 5.6E-46 1.2E-50 347.3 21.4 256 34-327 1-303 (360)
94 cd06649 PKc_MEK2 Catalytic dom 100.0 2.5E-45 5.4E-50 339.0 25.2 275 33-323 4-307 (331)
95 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-45 2.6E-50 339.3 22.6 246 40-326 1-261 (318)
96 cd05575 STKc_SGK Catalytic dom 100.0 4.6E-46 1E-50 342.8 19.7 246 40-326 1-260 (323)
97 KOG0201 Serine/threonine prote 100.0 1E-47 2.3E-52 341.3 8.1 251 33-323 12-269 (467)
98 cd05597 STKc_DMPK_like Catalyt 100.0 2.9E-45 6.4E-50 338.5 24.7 260 34-327 1-276 (331)
99 KOG0192 Tyrosine kinase specif 100.0 3.3E-45 7.2E-50 334.8 24.2 245 34-315 41-297 (362)
100 cd05622 STKc_ROCK1 Catalytic d 100.0 4.1E-45 9E-50 342.1 25.4 258 31-325 40-312 (371)
101 cd05584 STKc_p70S6K Catalytic 100.0 1.6E-45 3.4E-50 339.2 22.1 247 39-326 1-265 (323)
102 cd05620 STKc_nPKC_delta Cataly 100.0 2.1E-45 4.5E-50 337.3 22.6 246 40-326 1-257 (316)
103 cd07855 STKc_ERK5 Catalytic do 100.0 5.4E-45 1.2E-49 337.3 25.5 307 34-352 5-325 (334)
104 cd05588 STKc_aPKC Catalytic do 100.0 1.8E-45 4E-50 339.6 22.1 247 40-326 1-271 (329)
105 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.2E-44 4.7E-49 325.9 28.7 277 34-320 1-286 (286)
106 cd05592 STKc_nPKC_theta_delta 100.0 2.5E-45 5.4E-50 336.8 22.5 246 40-326 1-257 (316)
107 cd07843 STKc_CDC2L1 Catalytic 100.0 8.1E-45 1.8E-49 330.0 25.2 280 33-320 4-293 (293)
108 cd07832 STKc_CCRK Catalytic do 100.0 1.1E-44 2.4E-49 327.8 25.9 276 35-321 1-286 (286)
109 cd07831 STKc_MOK Catalytic dom 100.0 1.6E-44 3.4E-49 326.1 26.9 275 36-320 1-282 (282)
110 cd05619 STKc_nPKC_theta Cataly 100.0 3.3E-45 7.1E-50 335.9 22.5 246 40-326 1-257 (316)
111 KOG0612 Rho-associated, coiled 100.0 1.5E-46 3.2E-51 366.1 13.9 269 32-337 73-358 (1317)
112 PLN00009 cyclin-dependent kina 100.0 2E-44 4.3E-49 327.6 27.0 283 34-325 2-292 (294)
113 cd05604 STKc_SGK3 Catalytic do 100.0 9.9E-46 2.1E-50 340.9 18.5 245 40-325 1-259 (325)
114 cd05623 STKc_MRCK_alpha Cataly 100.0 6.3E-45 1.4E-49 336.5 23.6 260 34-327 1-276 (332)
115 cd05615 STKc_cPKC_alpha Cataly 100.0 7.6E-45 1.6E-49 334.6 23.9 251 35-326 1-266 (323)
116 cd07841 STKc_CDK7 Catalytic do 100.0 2.4E-44 5.2E-49 327.7 26.8 281 35-326 1-291 (298)
117 cd07844 STKc_PCTAIRE_like Cata 100.0 3.3E-44 7.2E-49 325.7 27.6 277 33-320 4-291 (291)
118 PTZ00283 serine/threonine prot 100.0 1.5E-44 3.3E-49 349.1 26.9 262 32-324 30-304 (496)
119 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-44 2.4E-49 327.6 24.3 276 35-320 1-284 (284)
120 PHA03207 serine/threonine kina 100.0 5.5E-45 1.2E-49 344.1 23.0 280 33-325 91-383 (392)
121 cd05618 STKc_aPKC_iota Catalyt 100.0 4.9E-45 1.1E-49 336.6 21.9 247 40-326 1-271 (329)
122 PLN00034 mitogen-activated pro 100.0 4.6E-45 1E-49 340.2 21.8 255 31-324 71-335 (353)
123 cd05582 STKc_RSK_N N-terminal 100.0 1.6E-45 3.4E-50 338.6 18.3 247 39-326 1-263 (318)
124 PHA03211 serine/threonine kina 100.0 1.6E-44 3.4E-49 344.2 25.6 275 33-322 168-460 (461)
125 cd07842 STKc_CDK8_like Catalyt 100.0 2.9E-44 6.3E-49 329.8 26.0 282 35-320 1-316 (316)
126 PTZ00266 NIMA-related protein 100.0 1.7E-44 3.6E-49 360.5 26.3 266 30-326 9-304 (1021)
127 cd05607 STKc_GRK7 Catalytic do 100.0 1.1E-44 2.5E-49 326.4 22.7 252 42-327 1-264 (277)
128 KOG0986 G protein-coupled rece 100.0 6.6E-46 1.4E-50 330.4 14.4 264 29-327 180-456 (591)
129 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-45 3.6E-50 340.2 17.7 245 42-325 1-261 (330)
130 PF00069 Pkinase: Protein kina 100.0 6.7E-45 1.5E-49 324.5 20.9 252 36-320 1-260 (260)
131 cd05624 STKc_MRCK_beta Catalyt 100.0 9.9E-45 2.1E-49 335.0 22.7 260 34-327 1-276 (331)
132 cd07836 STKc_Pho85 Catalytic d 100.0 3.8E-44 8.2E-49 324.0 26.0 276 35-320 1-284 (284)
133 cd05630 STKc_GRK6 Catalytic do 100.0 2.1E-44 4.5E-49 326.0 23.5 257 35-326 1-270 (285)
134 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.7E-44 1E-48 332.0 26.4 287 33-326 4-309 (342)
135 cd05602 STKc_SGK1 Catalytic do 100.0 7.3E-45 1.6E-49 335.1 20.8 246 40-326 1-260 (325)
136 KOG0696 Serine/threonine prote 100.0 1.2E-45 2.7E-50 325.4 14.4 270 30-340 345-630 (683)
137 PTZ00267 NIMA-related protein 100.0 3.3E-44 7.2E-49 346.5 25.8 254 34-323 67-329 (478)
138 cd07834 STKc_MAPK Catalytic do 100.0 3.1E-44 6.6E-49 331.8 24.4 288 35-329 1-301 (330)
139 KOG0586 Serine/threonine prote 100.0 3.9E-45 8.4E-50 337.7 18.1 260 28-326 50-315 (596)
140 cd05603 STKc_SGK2 Catalytic do 100.0 8.8E-45 1.9E-49 334.0 20.0 246 40-326 1-260 (321)
141 KOG0579 Ste20-like serine/thre 100.0 3.7E-46 8E-51 343.7 10.6 258 33-325 31-297 (1187)
142 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.3E-44 5E-49 331.9 22.3 247 40-326 1-269 (327)
143 cd07865 STKc_CDK9 Catalytic do 100.0 1.5E-43 3.3E-48 324.1 27.6 285 31-320 9-310 (310)
144 KOG0671 LAMMER dual specificit 100.0 7.8E-46 1.7E-50 324.1 11.7 281 33-324 88-413 (415)
145 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.4E-43 5.1E-48 320.1 28.2 277 33-320 4-291 (291)
146 cd07851 STKc_p38 Catalytic dom 100.0 1.4E-43 3.1E-48 328.9 27.4 316 32-362 13-338 (343)
147 cd06650 PKc_MEK1 Catalytic dom 100.0 4.1E-44 8.8E-49 331.0 23.2 278 33-323 4-305 (333)
148 cd07852 STKc_MAPK15 Catalytic 100.0 6.2E-44 1.3E-48 330.7 24.3 289 30-329 3-307 (337)
149 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.4E-44 2E-48 321.3 24.6 258 34-325 1-269 (283)
150 cd07857 STKc_MPK1 Catalytic do 100.0 1.4E-43 3E-48 327.7 26.1 296 35-338 1-313 (332)
151 cd07866 STKc_BUR1 Catalytic do 100.0 2.7E-43 5.9E-48 322.6 27.8 283 32-320 6-311 (311)
152 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-43 2.6E-48 321.1 24.8 257 35-326 1-270 (285)
153 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.7E-43 3.6E-48 320.2 25.7 277 34-320 1-286 (286)
154 KOG0665 Jun-N-terminal kinase 100.0 5.6E-45 1.2E-49 311.9 14.7 325 32-369 15-359 (369)
155 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-43 2.4E-48 317.3 23.8 248 34-320 2-263 (263)
156 cd07833 STKc_CDKL Catalytic do 100.0 2.4E-43 5.1E-48 319.4 26.1 277 34-320 1-288 (288)
157 cd07835 STKc_CDK1_like Catalyt 100.0 1.9E-43 4.1E-48 319.3 25.3 275 36-320 1-283 (283)
158 cd07879 STKc_p38delta_MAPK13 C 100.0 6.1E-43 1.3E-47 324.6 29.2 282 34-326 15-306 (342)
159 cd05574 STKc_phototropin_like 100.0 2.8E-43 6E-48 323.4 26.7 261 34-331 1-303 (316)
160 PTZ00024 cyclin-dependent prot 100.0 2.6E-43 5.6E-48 326.3 26.5 281 31-325 5-321 (335)
161 cd06639 STKc_myosinIIIB Cataly 100.0 4.5E-43 9.8E-48 318.3 27.2 262 32-321 20-291 (291)
162 KOG0669 Cyclin T-dependent kin 100.0 5E-46 1.1E-50 308.5 6.7 286 32-322 15-320 (376)
163 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.4E-43 2E-47 323.6 29.5 285 33-327 16-310 (345)
164 cd05118 STKc_CMGC Catalytic do 100.0 1.8E-43 4E-48 319.2 24.0 274 36-320 1-283 (283)
165 KOG0668 Casein kinase II, alph 100.0 3.3E-45 7.1E-50 299.6 11.2 284 32-326 36-331 (338)
166 KOG0574 STE20-like serine/thre 100.0 1.4E-46 3.1E-51 319.1 3.1 253 34-323 33-289 (502)
167 cd05580 STKc_PKA Catalytic dom 100.0 2.9E-43 6.4E-48 319.4 24.8 250 34-326 1-263 (290)
168 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-42 3.3E-47 321.9 29.5 286 32-327 13-308 (343)
169 cd06638 STKc_myosinIIIA Cataly 100.0 4.6E-43 9.9E-48 317.4 25.3 264 29-320 13-286 (286)
170 KOG2345 Serine/threonine prote 100.0 2.9E-44 6.3E-49 297.2 15.1 257 34-317 21-296 (302)
171 cd06608 STKc_myosinIII_like Ca 100.0 6.4E-43 1.4E-47 314.2 25.2 263 30-320 2-275 (275)
172 cd07830 STKc_MAK_like Catalyti 100.0 6.4E-43 1.4E-47 315.8 24.9 275 36-320 1-283 (283)
173 cd07840 STKc_CDK9_like Catalyt 100.0 4.5E-43 9.8E-48 317.2 23.8 277 36-320 1-287 (287)
174 KOG1290 Serine/threonine prote 100.0 3.7E-43 8.1E-48 315.5 22.2 304 17-326 57-559 (590)
175 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 3.8E-43 8.2E-48 317.9 22.3 260 34-326 1-271 (286)
176 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.6E-43 9.9E-48 325.0 23.1 251 32-316 5-329 (338)
177 cd06619 PKc_MKK5 Catalytic dom 100.0 2E-43 4.4E-48 318.6 19.9 254 34-326 1-262 (279)
178 cd07864 STKc_CDK12 Catalytic d 100.0 1.9E-42 4.1E-47 315.8 26.5 283 32-320 5-302 (302)
179 cd06644 STKc_STK10_LOK Catalyt 100.0 1.1E-42 2.3E-47 315.9 24.6 258 33-326 11-278 (292)
180 KOG4279 Serine/threonine prote 100.0 2.3E-44 5.1E-49 334.8 13.7 248 41-323 582-838 (1226)
181 cd08227 PK_STRAD_alpha Pseudok 100.0 6.1E-43 1.3E-47 322.6 23.1 278 38-324 2-314 (327)
182 KOG0596 Dual specificity; seri 100.0 8.1E-44 1.8E-48 324.1 16.8 253 34-323 361-633 (677)
183 cd07829 STKc_CDK_like Catalyti 100.0 1.6E-42 3.6E-47 312.9 25.3 274 36-320 1-282 (282)
184 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-42 2.8E-47 312.1 24.4 257 33-320 5-272 (272)
185 KOG4236 Serine/threonine prote 100.0 1.4E-44 3.1E-49 327.1 11.6 252 35-323 563-825 (888)
186 cd08223 STKc_Nek4 Catalytic do 100.0 3.3E-42 7.1E-47 306.8 26.7 249 35-320 1-257 (257)
187 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.4E-42 5.2E-47 318.6 26.3 281 32-326 8-297 (328)
188 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2E-42 4.3E-47 309.7 25.0 256 34-320 1-267 (267)
189 cd06609 STKc_MST3_like Catalyt 100.0 8.6E-43 1.9E-47 313.6 22.6 251 34-325 1-259 (274)
190 KOG0983 Mitogen-activated prot 100.0 8.8E-44 1.9E-48 298.3 14.9 262 29-325 87-357 (391)
191 KOG0577 Serine/threonine prote 100.0 3E-44 6.4E-49 328.9 13.1 248 35-322 27-283 (948)
192 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-42 2.3E-47 314.0 22.9 255 33-323 4-268 (280)
193 cd08217 STKc_Nek2 Catalytic do 100.0 3.9E-42 8.4E-47 307.3 25.9 252 35-320 1-265 (265)
194 cd06615 PKc_MEK Catalytic doma 100.0 2.4E-42 5.2E-47 316.1 24.9 279 34-325 1-295 (308)
195 cd08220 STKc_Nek8 Catalytic do 100.0 3.1E-42 6.6E-47 306.7 25.0 249 35-320 1-256 (256)
196 KOG0607 MAP kinase-interacting 100.0 1.3E-43 2.7E-48 303.3 15.2 259 33-326 76-370 (463)
197 cd06654 STKc_PAK1 Catalytic do 100.0 3.1E-42 6.6E-47 313.6 25.4 252 33-323 19-276 (296)
198 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-42 3.5E-47 310.7 22.9 252 35-321 1-268 (268)
199 KOG1989 ARK protein kinase fam 100.0 3.3E-43 7.1E-48 337.8 19.5 249 34-317 37-307 (738)
200 cd07838 STKc_CDK4_6_like Catal 100.0 6.7E-42 1.5E-46 309.7 27.1 278 36-320 1-287 (287)
201 cd06655 STKc_PAK2 Catalytic do 100.0 4.3E-42 9.3E-47 312.5 25.8 253 33-324 18-276 (296)
202 cd06651 STKc_MEKK3 Catalytic d 100.0 2.4E-42 5.2E-47 309.4 23.2 250 34-321 2-265 (266)
203 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.4E-42 5.3E-47 309.4 23.2 246 35-320 1-267 (267)
204 cd08529 STKc_FA2-like Catalyti 100.0 7.2E-42 1.6E-46 304.3 25.8 248 35-320 1-256 (256)
205 cd06656 STKc_PAK3 Catalytic do 100.0 2.5E-42 5.5E-47 314.2 23.3 255 32-325 17-277 (297)
206 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.8E-42 8.1E-47 310.8 24.1 258 32-320 14-282 (282)
207 cd06631 STKc_YSK4 Catalytic do 100.0 3.8E-42 8.1E-47 307.9 23.7 247 35-320 1-265 (265)
208 cd06632 STKc_MEKK1_plant Catal 100.0 3.9E-42 8.4E-47 306.3 23.5 248 35-320 1-258 (258)
209 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-42 3.6E-47 314.0 21.4 263 34-325 4-275 (288)
210 cd05572 STKc_cGK_PKG Catalytic 100.0 4E-42 8.7E-47 307.2 23.6 246 42-326 1-261 (262)
211 cd05578 STKc_Yank1 Catalytic d 100.0 2.3E-42 4.9E-47 308.1 21.2 246 35-320 1-258 (258)
212 cd06643 STKc_SLK Catalytic dom 100.0 5E-42 1.1E-46 310.0 23.7 253 35-323 6-268 (282)
213 cd06645 STKc_MAP4K3 Catalytic 100.0 1.9E-42 4.2E-47 310.1 20.7 253 32-319 7-267 (267)
214 cd06612 STKc_MST1_2 Catalytic 100.0 4.9E-42 1.1E-46 305.4 23.1 250 34-320 3-256 (256)
215 cd05577 STKc_GRK Catalytic dom 100.0 4.9E-42 1.1E-46 309.2 23.3 251 42-327 1-264 (277)
216 cd06646 STKc_MAP4K5 Catalytic 100.0 1.9E-42 4.1E-47 310.2 20.2 252 33-319 8-267 (267)
217 cd06613 STKc_MAP4K3_like Catal 100.0 5.8E-42 1.3E-46 306.0 23.0 253 33-319 2-262 (262)
218 KOG0603 Ribosomal protein S6 k 100.0 7.3E-43 1.6E-47 324.3 17.7 248 29-320 317-566 (612)
219 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.5E-41 3.1E-46 307.8 25.8 263 34-325 1-274 (287)
220 PHA03210 serine/threonine kina 100.0 1.1E-42 2.4E-47 337.1 19.6 284 33-324 147-461 (501)
221 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-41 3.2E-46 302.4 24.8 248 35-320 1-256 (256)
222 KOG0197 Tyrosine kinases [Sign 100.0 1.6E-42 3.5E-47 316.7 18.7 243 34-315 206-455 (468)
223 cd06658 STKc_PAK5 Catalytic do 100.0 4.6E-42 1E-46 311.7 21.6 255 34-327 22-282 (292)
224 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-41 2.5E-46 304.8 23.8 250 34-321 2-265 (265)
225 cd08221 STKc_Nek9 Catalytic do 100.0 2.1E-41 4.5E-46 301.5 25.2 248 35-320 1-256 (256)
226 KOG0614 cGMP-dependent protein 100.0 5.8E-44 1.3E-48 321.8 8.6 258 33-329 419-689 (732)
227 cd05609 STKc_MAST Catalytic do 100.0 1.2E-41 2.6E-46 311.1 23.9 255 34-326 1-282 (305)
228 KOG0664 Nemo-like MAPK-related 100.0 4.6E-44 1E-48 300.1 6.6 292 28-325 47-351 (449)
229 KOG4721 Serine/threonine prote 100.0 3.9E-43 8.3E-48 320.4 12.9 236 39-318 129-365 (904)
230 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-41 2.4E-46 307.3 22.2 247 41-327 1-265 (279)
231 cd06605 PKc_MAPKK Catalytic do 100.0 1E-41 2.2E-46 305.0 21.8 251 34-323 1-263 (265)
232 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.5E-41 5.4E-46 303.7 24.3 252 35-320 2-272 (272)
233 cd05611 STKc_Rim15_like Cataly 100.0 1.4E-41 3E-46 303.4 22.4 246 40-325 2-259 (260)
234 cd06607 STKc_TAO Catalytic dom 100.0 2.6E-41 5.5E-46 309.1 24.2 250 34-323 15-273 (307)
235 PHA03390 pk1 serine/threonine- 100.0 3.1E-41 6.7E-46 302.4 24.0 249 33-322 13-267 (267)
236 cd05106 PTKc_CSF-1R Catalytic 100.0 1.7E-41 3.7E-46 318.0 23.1 249 33-316 37-367 (374)
237 cd08225 STKc_Nek5 Catalytic do 100.0 3.8E-41 8.3E-46 299.8 24.0 249 35-320 1-257 (257)
238 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.1E-42 1.1E-46 309.1 18.5 250 34-324 4-260 (277)
239 cd05606 STKc_beta_ARK Catalyti 100.0 2.4E-41 5.2E-46 304.9 22.7 247 41-327 1-265 (278)
240 cd06640 STKc_MST4 Catalytic do 100.0 2E-41 4.4E-46 305.2 22.0 249 34-323 4-259 (277)
241 cd06623 PKc_MAPKK_plant_like C 100.0 6.3E-41 1.4E-45 299.5 24.9 251 34-324 1-263 (264)
242 KOG0670 U4/U6-associated splic 100.0 6.7E-43 1.5E-47 315.7 11.9 282 32-322 430-751 (752)
243 cd08215 STKc_Nek Catalytic dom 100.0 6.5E-41 1.4E-45 298.0 24.4 250 35-320 1-258 (258)
244 PHA02988 hypothetical protein; 100.0 4.4E-41 9.6E-46 303.8 23.6 240 40-316 26-274 (283)
245 cd05104 PTKc_Kit Catalytic dom 100.0 4.9E-41 1.1E-45 315.2 24.6 249 34-317 35-370 (375)
246 cd05096 PTKc_DDR1 Catalytic do 100.0 5.2E-41 1.1E-45 306.7 23.8 253 34-315 5-299 (304)
247 cd06659 STKc_PAK6 Catalytic do 100.0 4.2E-41 9.2E-46 306.2 22.6 254 34-326 21-280 (297)
248 cd06647 STKc_PAK_I Catalytic d 100.0 5.8E-41 1.3E-45 304.7 23.0 255 32-325 17-277 (293)
249 cd08219 STKc_Nek3 Catalytic do 100.0 8.2E-41 1.8E-45 297.5 23.2 245 35-317 1-252 (255)
250 cd06917 STKc_NAK1_like Catalyt 100.0 6.7E-41 1.5E-45 301.7 22.8 251 35-324 2-262 (277)
251 cd05061 PTKc_InsR Catalytic do 100.0 1.7E-40 3.6E-45 301.0 25.4 258 32-325 4-288 (288)
252 cd06633 STKc_TAO3 Catalytic do 100.0 1.8E-40 3.9E-45 304.3 25.7 250 34-323 21-279 (313)
253 cd06624 STKc_ASK Catalytic dom 100.0 1.8E-40 3.9E-45 297.6 24.9 248 38-320 12-268 (268)
254 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.1E-41 1.1E-45 303.7 21.5 259 33-323 4-272 (284)
255 cd08226 PK_STRAD_beta Pseudoki 100.0 3.6E-41 7.9E-46 311.0 20.7 278 40-326 4-317 (328)
256 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-40 5.4E-45 294.3 25.1 249 35-320 1-256 (256)
257 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.3E-40 2.9E-45 298.2 23.4 245 33-316 4-260 (266)
258 cd06648 STKc_PAK_II Catalytic 100.0 2.8E-40 6.1E-45 299.0 25.7 253 35-326 20-278 (285)
259 cd06626 STKc_MEKK4 Catalytic d 100.0 2.4E-40 5.2E-45 295.9 24.9 250 35-320 1-264 (264)
260 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.9E-40 4.2E-45 296.7 24.3 249 34-320 2-264 (264)
261 cd06641 STKc_MST3 Catalytic do 100.0 1.2E-40 2.7E-45 300.1 23.2 248 35-323 5-259 (277)
262 cd05581 STKc_PDK1 Catalytic do 100.0 9.4E-41 2E-45 301.0 22.1 246 34-320 1-280 (280)
263 cd08228 STKc_Nek6 Catalytic do 100.0 1.8E-40 3.9E-45 297.3 23.5 249 34-316 2-260 (267)
264 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-40 2.4E-45 297.9 22.0 245 42-325 1-265 (265)
265 cd05052 PTKc_Abl Catalytic dom 100.0 2.7E-40 5.9E-45 295.6 24.3 245 34-316 6-257 (263)
266 cd08222 STKc_Nek11 Catalytic d 100.0 1E-40 2.3E-45 297.7 21.4 249 35-320 1-260 (260)
267 cd06618 PKc_MKK7 Catalytic dom 100.0 2.8E-40 6E-45 300.7 24.4 260 31-325 12-281 (296)
268 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-40 2.7E-45 301.0 21.9 248 34-317 5-279 (283)
269 cd05088 PTKc_Tie2 Catalytic do 100.0 1.1E-40 2.5E-45 304.2 21.7 250 32-317 5-276 (303)
270 cd05122 PKc_STE Catalytic doma 100.0 5.5E-40 1.2E-44 290.9 25.3 248 35-319 1-253 (253)
271 KOG0584 Serine/threonine prote 100.0 9.1E-42 2E-46 315.8 14.2 254 32-323 37-302 (632)
272 cd05054 PTKc_VEGFR Catalytic d 100.0 1.2E-40 2.5E-45 308.3 21.5 251 33-317 6-329 (337)
273 cd06635 STKc_TAO1 Catalytic do 100.0 5.4E-40 1.2E-44 301.7 25.5 248 35-322 26-282 (317)
274 cd06657 STKc_PAK4 Catalytic do 100.0 2.6E-40 5.7E-45 300.2 22.9 252 36-326 22-279 (292)
275 cd06634 STKc_TAO2 Catalytic do 100.0 2.9E-40 6.3E-45 302.3 23.3 250 34-323 15-273 (308)
276 cd05613 STKc_MSK1_N N-terminal 100.0 2E-40 4.4E-45 300.7 22.0 256 35-326 1-277 (290)
277 PRK13184 pknD serine/threonine 100.0 3.6E-40 7.7E-45 328.3 25.1 250 34-317 2-285 (932)
278 cd05089 PTKc_Tie1 Catalytic do 100.0 3.2E-40 6.9E-45 300.5 22.9 248 34-317 2-271 (297)
279 cd06606 STKc_MAPKKK Catalytic 100.0 8.1E-40 1.7E-44 291.0 24.9 250 35-320 1-260 (260)
280 cd05049 PTKc_Trk Catalytic dom 100.0 3E-40 6.6E-45 297.9 22.0 248 33-316 4-276 (280)
281 KOG4645 MAPKKK (MAP kinase kin 100.0 1.8E-42 4E-47 341.6 7.8 256 31-324 1232-1501(1509)
282 cd05062 PTKc_IGF-1R Catalytic 100.0 6.6E-40 1.4E-44 295.4 23.7 250 32-317 4-274 (277)
283 KOG0608 Warts/lats-like serine 100.0 2.6E-41 5.7E-46 311.7 14.7 265 36-338 631-949 (1034)
284 cd08229 STKc_Nek7 Catalytic do 100.0 3.1E-40 6.8E-45 295.7 21.1 247 34-315 2-259 (267)
285 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-39 2.5E-44 289.5 24.6 246 35-320 1-254 (254)
286 cd05093 PTKc_TrkB Catalytic do 100.0 8.2E-40 1.8E-44 296.5 24.0 247 33-315 4-273 (288)
287 cd05032 PTKc_InsR_like Catalyt 100.0 9.3E-40 2E-44 294.3 24.1 249 32-316 4-273 (277)
288 cd05610 STKc_MASTL Catalytic d 100.0 6.3E-40 1.4E-44 327.3 25.3 142 33-185 3-152 (669)
289 cd06614 STKc_PAK Catalytic dom 100.0 6.7E-40 1.5E-44 296.7 23.2 257 32-325 17-278 (286)
290 PLN03225 Serine/threonine-prot 100.0 8.5E-40 1.8E-44 318.9 25.4 282 32-326 130-459 (566)
291 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-39 2.4E-44 290.4 24.0 243 34-316 4-253 (256)
292 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.8E-39 3.8E-44 290.7 25.5 248 34-316 2-260 (267)
293 cd08216 PK_STRAD Pseudokinase 100.0 1.1E-39 2.3E-44 299.4 24.5 275 37-325 5-303 (314)
294 cd05105 PTKc_PDGFR_alpha Catal 100.0 1E-39 2.2E-44 307.5 24.8 249 33-316 36-392 (400)
295 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-39 2.7E-44 290.2 23.6 245 33-317 3-254 (256)
296 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.3E-39 2.8E-44 293.5 23.9 250 33-317 5-274 (277)
297 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-39 2.7E-44 290.9 23.1 244 33-315 5-255 (261)
298 cd05123 STKc_AGC Catalytic dom 100.0 1.5E-39 3.2E-44 288.4 23.4 238 42-320 1-250 (250)
299 cd05035 PTKc_Axl_like Catalyti 100.0 1.6E-39 3.5E-44 291.9 23.9 251 36-317 1-268 (273)
300 cd00192 PTKc Catalytic domain 100.0 1.8E-39 4E-44 289.4 23.9 242 40-317 1-260 (262)
301 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-39 2.8E-44 289.3 22.7 238 40-316 1-248 (252)
302 KOG0695 Serine/threonine prote 100.0 1.7E-40 3.7E-45 286.1 15.6 262 27-327 243-526 (593)
303 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-39 2.6E-44 299.3 22.3 245 33-317 6-264 (316)
304 cd05053 PTKc_FGFR Catalytic do 100.0 1.6E-39 3.4E-44 295.3 22.7 249 33-317 11-287 (293)
305 cd05059 PTKc_Tec_like Catalyti 100.0 1.6E-39 3.6E-44 289.4 22.5 244 34-317 4-254 (256)
306 cd05090 PTKc_Ror1 Catalytic do 100.0 1.8E-39 4E-44 293.4 23.0 249 33-317 4-279 (283)
307 cd05091 PTKc_Ror2 Catalytic do 100.0 9.5E-40 2.1E-44 295.2 21.0 248 33-316 4-278 (283)
308 cd05068 PTKc_Frk_like Catalyti 100.0 2.4E-39 5.3E-44 289.1 23.1 244 33-315 5-255 (261)
309 KOG4250 TANK binding protein k 100.0 5.3E-41 1.1E-45 314.5 12.3 206 34-241 13-228 (732)
310 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.9E-39 6.3E-44 292.1 23.2 258 34-316 3-276 (283)
311 cd05071 PTKc_Src Catalytic dom 100.0 4E-39 8.7E-44 287.9 23.7 243 34-316 6-255 (262)
312 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-39 2.9E-44 290.7 20.5 246 32-316 4-256 (261)
313 cd05033 PTKc_EphR Catalytic do 100.0 4.8E-39 1E-43 288.0 24.1 246 33-317 3-261 (266)
314 cd05583 STKc_MSK_N N-terminal 100.0 1.9E-39 4.2E-44 294.0 21.8 256 35-326 1-275 (288)
315 cd05075 PTKc_Axl Catalytic dom 100.0 4E-39 8.6E-44 289.4 23.4 251 36-317 1-267 (272)
316 cd05051 PTKc_DDR Catalytic dom 100.0 3.5E-39 7.6E-44 293.4 23.2 255 33-316 4-292 (296)
317 cd05094 PTKc_TrkC Catalytic do 100.0 3.9E-39 8.5E-44 292.5 23.3 248 33-316 4-277 (291)
318 cd05082 PTKc_Csk Catalytic dom 100.0 5.4E-39 1.2E-43 286.0 23.7 243 33-316 5-251 (256)
319 cd05055 PTKc_PDGFR Catalytic d 100.0 6.3E-39 1.4E-43 292.6 24.2 249 31-316 32-296 (302)
320 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.5E-39 9.6E-44 294.3 23.1 249 33-317 17-295 (307)
321 KOG0587 Traf2- and Nck-interac 100.0 1.2E-39 2.7E-44 311.0 20.0 268 26-323 11-288 (953)
322 cd05045 PTKc_RET Catalytic dom 100.0 6.4E-39 1.4E-43 290.9 23.1 246 35-316 1-281 (290)
323 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.9E-39 2.1E-43 285.0 23.9 243 33-315 5-254 (260)
324 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-38 2.3E-43 284.1 23.7 242 33-316 5-251 (256)
325 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.3E-38 2.8E-43 292.1 25.0 249 32-316 10-288 (314)
326 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.3E-39 1.2E-43 298.2 22.6 251 33-317 6-335 (343)
327 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-38 3.4E-43 283.7 24.9 242 34-315 6-254 (260)
328 cd05097 PTKc_DDR_like Catalyti 100.0 6.7E-39 1.5E-43 291.5 22.7 255 33-316 4-291 (295)
329 cd05034 PTKc_Src_like Catalyti 100.0 1.2E-38 2.6E-43 284.5 23.9 246 31-315 3-255 (261)
330 cd05107 PTKc_PDGFR_beta Cataly 100.0 9.2E-39 2E-43 300.9 24.3 251 32-317 35-395 (401)
331 cd05092 PTKc_TrkA Catalytic do 100.0 6.5E-39 1.4E-43 289.4 22.4 247 34-316 5-276 (280)
332 KOG1151 Tousled-like protein k 100.0 9.4E-41 2E-45 296.9 10.1 266 26-322 455-746 (775)
333 cd05576 STKc_RPK118_like Catal 100.0 1.2E-39 2.6E-44 287.0 16.9 228 45-320 4-237 (237)
334 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.3E-38 2.9E-43 284.1 23.9 244 33-316 5-255 (260)
335 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-38 2.6E-43 287.4 23.7 245 32-316 5-263 (279)
336 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.1E-38 2.3E-43 291.4 23.5 250 32-317 13-292 (304)
337 KOG1006 Mitogen-activated prot 100.0 2.1E-41 4.6E-46 282.9 5.1 264 34-326 64-336 (361)
338 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-38 2.5E-43 284.1 23.0 234 41-315 2-249 (257)
339 cd08528 STKc_Nek10 Catalytic d 100.0 1.7E-38 3.7E-43 284.9 24.0 249 35-317 1-266 (269)
340 cd05047 PTKc_Tie Catalytic dom 100.0 1E-38 2.3E-43 286.5 22.6 241 40-316 1-263 (270)
341 cd05050 PTKc_Musk Catalytic do 100.0 1E-38 2.2E-43 289.3 22.7 248 33-316 4-284 (288)
342 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-38 2.4E-43 285.9 22.6 245 33-316 3-261 (267)
343 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-38 3.2E-43 285.1 23.4 244 34-316 5-262 (268)
344 PF07714 Pkinase_Tyr: Protein 100.0 6.6E-39 1.4E-43 286.0 21.0 242 37-316 2-257 (259)
345 PHA02882 putative serine/threo 100.0 1.1E-38 2.5E-43 289.8 22.9 254 34-316 12-291 (294)
346 cd05040 PTKc_Ack_like Catalyti 100.0 2.3E-38 4.9E-43 282.1 23.8 239 40-316 1-253 (257)
347 cd05065 PTKc_EphR_B Catalytic 100.0 1.9E-38 4.2E-43 284.6 23.3 244 34-316 4-263 (269)
348 cd05046 PTK_CCK4 Pseudokinase 100.0 2.3E-38 5E-43 284.9 23.6 249 34-317 5-272 (275)
349 KOG1035 eIF-2alpha kinase GCN2 100.0 1.5E-39 3.2E-44 319.6 16.7 256 34-321 479-875 (1351)
350 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.9E-38 4.2E-43 293.5 23.4 249 33-317 11-289 (334)
351 cd05060 PTKc_Syk_like Catalyti 100.0 3.1E-38 6.8E-43 281.3 23.8 236 40-316 1-250 (257)
352 cd05043 PTK_Ryk Pseudokinase d 100.0 2.9E-38 6.3E-43 285.1 23.8 250 32-316 4-271 (280)
353 smart00219 TyrKc Tyrosine kina 100.0 3.7E-38 8.1E-43 280.5 24.2 243 36-316 1-256 (258)
354 cd05111 PTK_HER3 Pseudokinase 100.0 2.6E-38 5.6E-43 285.3 23.0 244 33-316 6-263 (279)
355 cd05112 PTKc_Itk Catalytic dom 100.0 4.3E-38 9.3E-43 280.1 23.8 244 34-317 4-254 (256)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.5E-39 9.7E-44 286.9 17.5 236 40-317 1-256 (258)
357 cd05095 PTKc_DDR2 Catalytic do 100.0 2.5E-38 5.4E-43 287.9 22.7 254 34-316 5-292 (296)
358 cd05115 PTKc_Zap-70 Catalytic 100.0 5.5E-38 1.2E-42 279.8 23.9 236 41-316 2-250 (257)
359 KOG1187 Serine/threonine prote 100.0 4.4E-39 9.6E-44 296.5 17.3 261 32-315 73-346 (361)
360 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.7E-38 1E-42 284.3 23.4 260 34-316 4-278 (284)
361 cd05041 PTKc_Fes_like Catalyti 100.0 6.2E-38 1.3E-42 278.3 23.5 237 40-316 1-247 (251)
362 cd05056 PTKc_FAK Catalytic dom 100.0 7.1E-38 1.5E-42 281.0 23.9 244 33-316 5-260 (270)
363 cd05073 PTKc_Hck Catalytic dom 100.0 7.3E-38 1.6E-42 279.4 23.8 243 33-315 5-254 (260)
364 cd05085 PTKc_Fer Catalytic dom 100.0 7.5E-38 1.6E-42 277.6 23.7 237 40-316 1-246 (250)
365 cd05042 PTKc_Aatyk Catalytic d 100.0 7.1E-38 1.5E-42 280.9 23.5 246 40-316 1-265 (269)
366 cd05057 PTKc_EGFR_like Catalyt 100.0 9.7E-38 2.1E-42 281.5 24.4 244 32-315 5-262 (279)
367 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.2E-38 1.1E-42 284.0 22.1 256 35-317 5-279 (284)
368 KOG0193 Serine/threonine prote 100.0 2.5E-39 5.5E-44 298.0 13.3 245 34-316 392-648 (678)
369 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.7E-38 1.2E-42 280.5 21.4 237 40-317 1-260 (262)
370 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.5E-38 9.8E-43 283.0 20.8 235 41-317 2-272 (274)
371 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-37 3.4E-42 278.7 24.2 246 40-316 1-265 (269)
372 cd05044 PTKc_c-ros Catalytic d 100.0 5.3E-38 1.2E-42 281.6 20.8 241 40-316 1-265 (269)
373 cd05083 PTKc_Chk Catalytic dom 100.0 1E-37 2.3E-42 277.4 22.2 241 33-316 5-249 (254)
374 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-37 3.5E-42 283.5 22.2 245 33-317 6-264 (303)
375 cd05058 PTKc_Met_Ron Catalytic 100.0 2.3E-37 4.9E-42 276.4 22.1 239 40-316 1-254 (262)
376 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.9E-37 1.1E-41 275.4 23.7 246 40-316 1-264 (268)
377 KOG0194 Protein tyrosine kinas 100.0 4.8E-38 1E-42 291.6 17.3 243 35-315 158-414 (474)
378 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.4E-37 5.2E-42 275.6 20.9 233 40-316 1-256 (259)
379 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.9E-37 1.1E-41 276.0 23.0 250 36-316 1-267 (273)
380 KOG1026 Nerve growth factor re 100.0 5.6E-38 1.2E-42 300.6 16.1 244 35-314 487-755 (774)
381 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.6E-37 1.9E-41 275.8 21.6 260 34-316 4-278 (284)
382 KOG1167 Serine/threonine prote 100.0 8.6E-38 1.9E-42 277.2 13.0 284 29-325 31-389 (418)
383 PLN03224 probable serine/threo 100.0 3.1E-36 6.7E-41 287.2 23.5 274 31-322 142-505 (507)
384 KOG1095 Protein tyrosine kinas 100.0 1.6E-36 3.5E-41 300.5 21.3 248 33-316 691-956 (1025)
385 KOG1027 Serine/threonine prote 100.0 4.1E-37 8.9E-42 292.5 11.1 249 36-321 511-771 (903)
386 smart00220 S_TKc Serine/Threon 100.0 3.2E-35 7E-40 258.6 22.3 238 46-320 1-244 (244)
387 KOG4278 Protein tyrosine kinas 100.0 8.1E-36 1.8E-40 275.0 16.1 242 34-314 267-516 (1157)
388 KOG0984 Mitogen-activated prot 100.0 4.7E-36 1E-40 242.2 10.9 215 31-251 43-267 (282)
389 KOG4257 Focal adhesion tyrosin 100.0 1.3E-35 2.8E-40 273.8 14.7 239 36-314 391-642 (974)
390 KOG1094 Discoidin domain recep 100.0 4.2E-35 9E-40 268.7 15.8 250 34-315 538-798 (807)
391 KOG0199 ACK and related non-re 100.0 6.5E-35 1.4E-39 272.2 14.2 250 34-322 110-373 (1039)
392 PLN00113 leucine-rich repeat r 100.0 2.6E-34 5.6E-39 300.9 19.6 253 34-317 690-947 (968)
393 KOG0196 Tyrosine kinase, EPH ( 100.0 2.6E-35 5.6E-40 278.0 9.9 244 35-317 630-887 (996)
394 KOG1152 Signal transduction se 100.0 2.8E-34 6.1E-39 263.0 12.3 206 24-239 551-771 (772)
395 KOG0576 Mitogen-activated prot 100.0 1.4E-34 3E-39 268.9 7.1 258 31-322 12-276 (829)
396 KOG1345 Serine/threonine kinas 100.0 4.6E-33 1E-37 233.7 8.4 261 28-322 18-292 (378)
397 KOG0200 Fibroblast/platelet-de 100.0 6E-31 1.3E-35 259.2 22.3 244 36-315 298-573 (609)
398 KOG3653 Transforming growth fa 100.0 1.2E-31 2.6E-36 240.9 14.5 192 34-234 210-421 (534)
399 KOG2052 Activin A type IB rece 100.0 3.6E-31 7.8E-36 236.2 16.9 270 9-314 195-496 (513)
400 KOG1025 Epidermal growth facto 100.0 2.1E-31 4.6E-36 252.8 14.8 240 36-315 698-951 (1177)
401 cd00180 PKc Catalytic domain o 100.0 1E-29 2.3E-34 218.2 22.0 208 42-318 1-215 (215)
402 PLN00181 protein SPA1-RELATED; 100.0 4.9E-31 1.1E-35 269.5 11.2 206 83-323 28-271 (793)
403 smart00221 STYKc Protein kinas 100.0 3.9E-29 8.4E-34 217.6 20.3 200 36-246 1-210 (225)
404 smart00750 KIND kinase non-cat 100.0 1.2E-28 2.6E-33 206.7 11.9 167 116-322 1-170 (176)
405 KOG1024 Receptor-like protein 99.9 2.5E-27 5.3E-32 208.6 14.9 247 34-315 284-549 (563)
406 KOG0590 Checkpoint kinase and 99.9 1.2E-28 2.5E-33 240.2 6.5 261 34-326 317-594 (601)
407 KOG0603 Ribosomal protein S6 k 99.9 1.7E-28 3.7E-33 228.7 3.9 237 41-326 1-252 (612)
408 KOG1164 Casein kinase (serine/ 99.9 3.8E-25 8.2E-30 203.0 22.3 251 35-317 19-293 (322)
409 KOG1163 Casein kinase (serine/ 99.9 6.4E-26 1.4E-30 187.8 14.8 205 31-245 12-229 (341)
410 PRK09188 serine/threonine prot 99.9 4E-25 8.7E-30 202.6 15.0 173 29-221 13-210 (365)
411 COG0515 SPS1 Serine/threonine 99.9 1.4E-23 3.1E-28 192.6 25.2 260 36-325 2-283 (384)
412 KOG0606 Microtubule-associated 99.9 7.8E-26 1.7E-30 221.1 9.9 227 30-326 79-324 (1205)
413 KOG1165 Casein kinase (serine/ 99.9 5.2E-24 1.1E-28 184.2 17.6 206 34-249 28-251 (449)
414 KOG4158 BRPK/PTEN-induced prot 99.9 8.5E-25 1.8E-29 193.3 12.0 195 85-312 274-505 (598)
415 PF14531 Kinase-like: Kinase-l 99.9 8.6E-25 1.9E-29 192.2 11.2 237 35-308 13-288 (288)
416 KOG1240 Protein kinase contain 99.9 1.2E-24 2.5E-29 213.2 7.7 241 35-317 24-291 (1431)
417 cd05147 RIO1_euk RIO kinase fa 99.9 5.5E-23 1.2E-27 173.6 10.6 135 39-187 2-167 (190)
418 PRK10359 lipopolysaccharide co 99.9 1.5E-22 3.2E-27 173.0 11.6 170 33-231 30-216 (232)
419 PRK12274 serine/threonine prot 99.9 3.2E-21 7E-26 161.3 14.1 181 37-240 5-210 (218)
420 cd05145 RIO1_like RIO kinase f 99.9 2.4E-21 5.3E-26 164.1 12.3 137 38-188 1-168 (190)
421 KOG1166 Mitotic checkpoint ser 99.8 2.6E-20 5.7E-25 185.7 14.6 194 30-235 694-901 (974)
422 PRK10345 hypothetical protein; 99.8 1.1E-19 2.5E-24 154.8 14.2 135 37-184 5-156 (210)
423 KOG0195 Integrin-linked kinase 99.8 1.4E-20 3.1E-25 158.9 8.1 239 34-315 190-440 (448)
424 smart00090 RIO RIO-like kinase 99.8 7.5E-20 1.6E-24 159.7 10.7 140 35-187 29-198 (237)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.5E-20 5.3E-25 171.3 6.6 179 104-320 328-515 (516)
426 KOG1023 Natriuretic peptide re 99.8 1.3E-18 2.9E-23 162.7 11.4 203 81-315 1-218 (484)
427 KOG0590 Checkpoint kinase and 99.7 2.3E-19 5E-24 175.3 1.0 256 33-322 19-291 (601)
428 PRK14879 serine/threonine prot 99.7 3.1E-17 6.7E-22 141.6 13.4 129 40-186 2-143 (211)
429 cd05144 RIO2_C RIO kinase fami 99.7 1.9E-17 4.2E-22 141.3 11.1 132 35-187 16-175 (198)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 1.4E-16 2.9E-21 136.3 12.7 125 41-186 1-138 (199)
431 PRK09605 bifunctional UGMP fam 99.7 3.1E-16 6.7E-21 153.6 14.3 133 33-187 332-477 (535)
432 cd05119 RIO RIO kinase family, 99.7 6E-16 1.3E-20 130.9 11.3 131 39-187 2-164 (187)
433 KOG0601 Cyclin-dependent kinas 99.6 3.2E-16 6.9E-21 146.9 8.0 252 31-323 111-385 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.6 6.6E-15 1.4E-19 128.8 13.9 134 39-186 36-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.6 7E-15 1.5E-19 119.4 11.1 131 38-186 2-138 (155)
436 KOG0606 Microtubule-associated 99.6 6E-16 1.3E-20 152.5 4.5 263 32-332 802-1107(1205)
437 KOG1266 Protein kinase [Signal 99.6 4.7E-15 1E-19 129.0 6.6 208 80-324 120-338 (458)
438 KOG1243 Protein kinase [Genera 99.5 7.3E-13 1.6E-17 125.8 16.4 187 30-234 9-200 (690)
439 KOG3741 Poly(A) ribonuclease s 99.4 7.3E-12 1.6E-16 115.7 18.3 234 28-317 267-521 (655)
440 PRK04750 ubiB putative ubiquin 99.4 8.9E-13 1.9E-17 126.9 11.1 142 34-189 120-316 (537)
441 TIGR01982 UbiB 2-polyprenylphe 99.4 2.1E-12 4.5E-17 122.8 12.4 137 39-188 122-308 (437)
442 cd05146 RIO3_euk RIO kinase fa 99.4 2E-12 4.4E-17 108.3 10.8 132 39-187 2-174 (197)
443 KOG0601 Cyclin-dependent kinas 99.4 2.7E-13 5.8E-18 127.5 5.0 249 31-322 262-519 (524)
444 cd05151 ChoK Choline Kinase (C 99.4 4.4E-12 9.6E-17 105.3 10.0 126 39-186 3-136 (170)
445 KOG2137 Protein kinase [Signal 99.3 1.1E-12 2.4E-17 125.1 4.7 156 144-326 108-274 (700)
446 KOG3087 Serine/threonine prote 99.3 3.6E-11 7.9E-16 97.1 12.1 140 38-187 11-166 (229)
447 COG3642 Mn2+-dependent serine/ 99.2 2.9E-10 6.2E-15 92.3 11.6 127 40-187 2-141 (204)
448 COG4248 Uncharacterized protei 99.2 2.9E-09 6.2E-14 96.6 17.5 258 38-313 15-292 (637)
449 PF01163 RIO1: RIO1 family; I 99.1 8.5E-10 1.9E-14 92.2 10.4 121 49-187 1-156 (188)
450 PRK15123 lipopolysaccharide co 99.0 7.6E-09 1.7E-13 91.7 15.1 133 49-186 37-194 (268)
451 cd05154 ACAD10_11_like Acyl-Co 99.0 4.9E-09 1.1E-13 90.9 13.6 140 40-186 4-206 (223)
452 COG0478 RIO-like serine/threon 98.9 1.7E-08 3.7E-13 87.1 10.4 131 36-186 93-251 (304)
453 KOG0576 Mitogen-activated prot 98.8 8.8E-10 1.9E-14 104.6 0.0 246 35-323 243-490 (829)
454 PRK09902 hypothetical protein; 98.7 7.5E-07 1.6E-11 75.1 14.5 137 43-186 27-179 (216)
455 PF06293 Kdo: Lipopolysacchari 98.7 2.1E-07 4.5E-12 79.7 11.5 107 74-186 58-170 (206)
456 PF06176 WaaY: Lipopolysacchar 98.6 9E-07 2E-11 74.9 13.3 137 33-186 30-183 (229)
457 COG0661 AarF Predicted unusual 98.6 1.4E-07 3.1E-12 90.6 8.6 138 40-189 131-317 (517)
458 COG1718 RIO1 Serine/threonine 98.5 9.2E-07 2E-11 75.7 11.1 134 39-187 53-216 (268)
459 KOG1035 eIF-2alpha kinase GCN2 98.5 5E-07 1.1E-11 91.8 10.1 205 75-325 230-442 (1351)
460 KOG1235 Predicted unusual prot 98.4 1.7E-06 3.6E-11 83.1 9.9 137 39-188 166-356 (538)
461 PF01636 APH: Phosphotransfera 98.4 3.4E-06 7.5E-11 73.5 10.4 75 39-117 2-80 (239)
462 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.7E-05 3.8E-10 68.8 12.0 69 40-117 7-79 (226)
463 PLN02876 acyl-CoA dehydrogenas 98.0 7.8E-05 1.7E-09 77.2 13.3 77 39-117 43-129 (822)
464 PF13095 FTA2: Kinetochore Sim 98.0 0.00011 2.3E-09 61.7 11.3 127 33-184 36-206 (207)
465 cd05150 APH Aminoglycoside 3'- 97.9 0.00015 3.2E-09 63.9 12.0 70 41-117 5-77 (244)
466 COG2112 Predicted Ser/Thr prot 97.9 7.7E-05 1.7E-09 60.7 9.0 126 37-186 25-155 (201)
467 KOG2270 Serine/threonine prote 97.9 8.3E-05 1.8E-09 67.4 9.4 137 37-186 147-313 (520)
468 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.00033 7E-09 59.2 10.8 128 39-180 6-165 (199)
469 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00042 9.1E-09 60.6 11.2 31 155-186 164-194 (235)
470 cd05157 ETNK_euk Ethanolamine 97.7 0.00075 1.6E-08 59.0 12.8 69 39-116 3-76 (235)
471 TIGR02721 ycfN_thiK thiamine k 97.7 0.00039 8.4E-09 61.7 10.3 134 41-186 3-175 (256)
472 KOG1093 Predicted protein kina 97.6 0.00017 3.8E-09 68.0 7.3 173 75-325 30-202 (725)
473 KOG1826 Ras GTPase activating 97.5 4.2E-05 9.1E-10 80.2 2.6 213 77-322 1279-1497(2724)
474 PRK09550 mtnK methylthioribose 97.5 0.0029 6.2E-08 59.4 13.5 71 39-116 31-115 (401)
475 PRK10593 hypothetical protein; 97.4 0.0037 7.9E-08 56.8 13.6 76 37-116 17-97 (297)
476 KOG2268 Serine/threonine prote 97.4 0.00012 2.6E-09 65.3 3.6 133 35-188 93-253 (465)
477 PRK05231 homoserine kinase; Pr 97.4 0.0028 6.2E-08 58.1 12.1 30 155-185 187-216 (319)
478 PF12260 PIP49_C: Protein-kina 97.3 0.00091 2E-08 56.2 7.6 98 76-187 8-112 (188)
479 TIGR00938 thrB_alt homoserine 97.2 0.0041 8.8E-08 56.8 11.5 146 37-185 25-216 (307)
480 cd05153 HomoserineK_II Homoser 97.2 0.0039 8.5E-08 56.5 11.4 144 39-185 19-204 (296)
481 cd05156 ChoK_euk Choline Kinas 97.0 0.019 4E-07 52.3 13.1 69 39-116 3-81 (302)
482 PLN02236 choline kinase 96.9 0.019 4.1E-07 53.3 12.8 141 36-186 38-231 (344)
483 PLN02421 phosphotransferase, a 96.9 0.015 3.3E-07 53.6 11.6 30 157-186 184-213 (330)
484 TIGR02906 spore_CotS spore coa 96.8 0.024 5.3E-07 51.7 12.6 29 155-185 187-215 (313)
485 TIGR01767 MTRK 5-methylthiorib 96.6 0.037 8.1E-07 51.1 12.3 69 41-116 2-84 (370)
486 PRK12396 5-methylribose kinase 96.6 0.02 4.3E-07 53.5 10.0 71 39-116 34-117 (409)
487 COG3173 Predicted aminoglycosi 96.3 0.07 1.5E-06 48.5 12.0 30 157-187 200-229 (321)
488 PLN02756 S-methyl-5-thioribose 96.2 0.073 1.6E-06 50.1 11.9 70 38-116 36-119 (418)
489 cd05152 MPH2' Macrolide 2'-Pho 96.1 0.11 2.5E-06 46.5 12.1 31 156-186 186-216 (276)
490 TIGR02904 spore_ysxE spore coa 96.0 0.076 1.6E-06 48.5 11.0 31 155-186 196-226 (309)
491 KOG1236 Predicted unusual prot 95.6 0.032 6.9E-07 51.8 6.2 61 108-173 321-382 (565)
492 COG5072 ALK1 Serine/threonine 95.3 0.06 1.3E-06 49.3 7.1 77 102-188 296-372 (488)
493 PTZ00384 choline kinase; Provi 95.2 0.47 1E-05 44.6 13.0 28 156-185 228-255 (383)
494 PF03881 Fructosamin_kin: Fruc 95.2 0.13 2.9E-06 46.2 8.9 72 37-115 20-95 (288)
495 PF07387 Seadorna_VP7: Seadorn 94.8 0.17 3.6E-06 43.3 7.9 84 75-184 106-190 (308)
496 KOG2269 Serine/threonine prote 94.4 0.037 8E-07 49.8 3.2 132 37-185 255-431 (531)
497 PHA03111 Ser/Thr kinase; Provi 94.4 0.067 1.5E-06 48.3 4.8 63 109-171 252-318 (444)
498 PF07914 DUF1679: Protein of u 93.9 0.075 1.6E-06 50.4 4.4 30 157-186 270-303 (414)
499 PF05445 Pox_ser-thr_kin: Poxv 93.1 0.11 2.5E-06 47.1 3.9 62 109-170 248-313 (434)
500 PTZ00296 choline kinase; Provi 92.6 2.9 6.4E-05 40.2 13.0 70 38-116 109-190 (442)
No 1
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.9e-72 Score=485.76 Aligned_cols=360 Identities=71% Similarity=1.194 Sum_probs=342.5
Q ss_pred cccceEeeccCCCCCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecc
Q 017139 14 VTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLK 93 (376)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~ 93 (376)
..+.+..++..+....++..-.|.-.+.+|.|+||.||+|....+++.+|||++..+.+...+|.++|+.++|||||++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~ 83 (364)
T KOG0658|consen 4 ESGHVIQTVAEGRNDGKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLL 83 (364)
T ss_pred cceeEEEEEeecCCCCcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEE
Confidence 45667777778877777888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC
Q 017139 94 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT 173 (376)
Q Consensus 94 ~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~ 173 (376)
.+|....+.+..++.+||||++.+|.+.++++...+..++...++-+.+||++||.|||+ .||+||||||+|+|+|.+.
T Consensus 84 ~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~t 162 (364)
T KOG0658|consen 84 YFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDT 162 (364)
T ss_pred EEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCC
Confidence 999877766567888999999999999999988889999999999999999999999999 7999999999999999988
Q ss_pred CcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 017139 174 HQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 253 (376)
Q Consensus 174 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~ 253 (376)
+.+||||||.|+....+.++.++.||++|+|||++.+...|+.+.||||.||++.||+-|++.|+|.+..+++..|++.+
T Consensus 163 g~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~l 242 (364)
T KOG0658|consen 163 GVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVL 242 (364)
T ss_pred CeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCC
Q 017139 254 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG 333 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~ 333 (376)
|+|+.+++..+++++.+..+|+++..+|...+....++++.+|+.++|.++|.+|.++.|+|.||||..++.++.+++.+
T Consensus 243 G~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l~~g 322 (364)
T KOG0658|consen 243 GTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKLPNG 322 (364)
T ss_pred CCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhhhcCCHHHHhhhcHHHHHhhcCCCCCCCC
Q 017139 334 RPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHSA 374 (376)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (376)
.+.|++++|........++....++|++.+++.+....+.+
T Consensus 323 ~~lp~lf~f~~~e~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 363 (364)
T KOG0658|consen 323 RPLPPLFNFKRAELGISPELVNVLIPEHLREQEKDKILCES 363 (364)
T ss_pred CcCCCccCchHHHhccchHHHHhhccHhhhhhccccccccC
Confidence 99999999999999999999999999999999888776654
No 2
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-61 Score=433.85 Aligned_cols=283 Identities=37% Similarity=0.661 Sum_probs=256.4
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccc-----hHHHHHHHHhCC-CCCeeecceeeeecCCCCce
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-----KNRELQLMRLMD-HPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~ 105 (376)
..++|.+.++||.|.||.||+|+.+.+|+.||||++++.... ..||+.-|++++ ||||+++.+++.+ .+.
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d----~~~ 83 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD----NDR 83 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc----cCc
Confidence 457899999999999999999999999999999998765322 237999999999 9999999999842 222
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|+|||||+.+|+++++.+ +..|++..++.|+.||+.||+|+|+ +|+.|||+||+|||+.. ...+||+|||+|+
T Consensus 84 ~L~fVfE~Md~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk-~GfFHRDlKPENiLi~~-~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 84 ILYFVFEFMDCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHK-HGFFHRDLKPENILISG-NDVIKIADFGLAR 158 (538)
T ss_pred eEeeeHHhhhhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHh-cCcccccCChhheEecc-cceeEeccccccc
Confidence 79999999999999999874 6889999999999999999999999 89999999999999996 7789999999999
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc-
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM- 264 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 264 (376)
...+..+.+.++.|+||+|||+++....|+.+.|+|++|||++|+++-++.|+|.+..+++.+|++.+|+|....|...
T Consensus 159 ev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 159 EVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred ccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 9999999999999999999999998888999999999999999999999999999999999999999999998877542
Q ss_pred -CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 265 -NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
......+.+|.....++...++. .++++.++|.+||.|||++||||+++|+||||+...
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 23345678899888888888887 999999999999999999999999999999997643
No 3
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.3e-61 Score=405.84 Aligned_cols=282 Identities=35% Similarity=0.655 Sum_probs=247.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
+.|+.+.++|+|+||.||+|+++.||+.||||++..... ...+|+.+|++++|+|+|.++++| .....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 579999999999999999999999999999999976543 345899999999999999999999 777789
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|+|||+.++++.+..+ ...++...++.+++|++.|+.|||+ ++++||||||+|||++. ++.+||||||+|+..
T Consensus 77 hLVFE~~dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~-~gvvKLCDFGFAR~L 151 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQ-NGVVKLCDFGFARTL 151 (396)
T ss_pred EEEeeecchHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEec-CCcEEeccchhhHhh
Confidence 999999999888888764 5679999999999999999999999 79999999999999997 889999999999998
Q ss_pred c-cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc--
Q 017139 188 V-KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM-- 264 (376)
Q Consensus 188 ~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 264 (376)
. ++...+.++.|+||+|||++.+...|++.+||||+||++.||++|.+.|++..+.+++..|.+.+|...+....-+
T Consensus 152 ~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~ 231 (396)
T KOG0593|consen 152 SAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSS 231 (396)
T ss_pred cCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhcc
Confidence 7 5566677888999999999999888999999999999999999999999999999999999999999887655543
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
++-+.-.++|.......-+.-..+++.-+.||+++||..||++|++.+++|.||||.++..
T Consensus 232 N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~e 292 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIE 292 (396)
T ss_pred CCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHH
Confidence 4555566777665543333333467889999999999999999999999999999976543
No 4
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-59 Score=409.49 Aligned_cols=321 Identities=37% Similarity=0.657 Sum_probs=271.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
..|...+.||.|+||.|+.|.++.+|+.||||++... .+...+|+.+|+.++|+||+.+.+++.........-+
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 4566689999999999999999999999999998632 2344589999999999999999999876444556679
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+|+|+|+.+|...++. ++.+++..++.+++|++.||+|+|+ .+++||||||+|+|++. +..+||+|||+|+..
T Consensus 102 YiV~elMetDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~-~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 102 YLVFELMETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNA-DCDLKICDFGLARYL 175 (359)
T ss_pred EEehhHHhhHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeecc-CCCEEeccccceeec
Confidence 99999998888887775 4559999999999999999999999 79999999999999997 888999999999988
Q ss_pred cc---CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 188 VK---GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 188 ~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.. ....+.++.|.||+|||++.....|+.+.||||+|||+.||++|++.|+|.+..+++..+...+|+|+.+.+...
T Consensus 176 ~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i 255 (359)
T KOG0660|consen 176 DKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKI 255 (359)
T ss_pred cccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHh
Confidence 64 334467788999999999998888999999999999999999999999999999999999999999999988876
Q ss_pred CcC-CcCc--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCCCCCCCCCC
Q 017139 265 NPN-YTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFN 341 (376)
Q Consensus 265 ~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~ 341 (376)
... ...+ ..|.....+|...|+ +.++.+.||+.+||.+||.+|+|++|+|+||||..+.++...+.....+. .
T Consensus 256 ~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~~~~---~ 331 (359)
T KOG0660|consen 256 RSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQPIFD---S 331 (359)
T ss_pred ccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCCCCc---c
Confidence 522 1122 577788888888888 79999999999999999999999999999999999988764432222111 1
Q ss_pred chhhhhcCCHHHHhhhcHHHHHhhcC
Q 017139 342 FKQELAGASPELINRLIPEHVRRQTG 367 (376)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (376)
+. .. .+.+.+..++.+++..-.+
T Consensus 332 ~~--~~-~~~~~~r~~i~~e~~~~~~ 354 (359)
T KOG0660|consen 332 FE--HE-LTEEELRELIYKEILDFHP 354 (359)
T ss_pred cc--cc-ccHHHHHHHHHHHHHhhCc
Confidence 22 22 5678888888888765544
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-59 Score=413.84 Aligned_cols=258 Identities=31% Similarity=0.499 Sum_probs=215.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----------cchHHHHHHHHhCCCCCeeecceeeeecC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----------RYKNRELQLMRLMDHPNVISLKHCFFSTT 100 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~ 100 (376)
..+.|.+.+.||+|+||.|-+|..+.+|+.||||++.+.. ....+|+++|+.++|||||+++++|
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f---- 245 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF---- 245 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee----
Confidence 4567899999999999999999999999999999996532 1224899999999999999999999
Q ss_pred CCCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCC--CCcEE
Q 017139 101 SKDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL--THQVK 177 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~--~~~~k 177 (376)
+...+.|+||||++|+ |.+. .-.++.+.+...+-++.|++.|+.|||+ +||+||||||+|||++.+ +..+|
T Consensus 246 -~~~ds~YmVlE~v~GGeLfd~----vv~nk~l~ed~~K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~llK 319 (475)
T KOG0615|consen 246 -EVPDSSYMVLEYVEGGELFDK----VVANKYLREDLGKLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCLLK 319 (475)
T ss_pred -ecCCceEEEEEEecCccHHHH----HHhccccccchhHHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceEEE
Confidence 5555589999999975 3333 3346789999999999999999999999 799999999999999742 36799
Q ss_pred EEecCCccccccCCCcceeeccccccChhhhhCCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcC
Q 017139 178 LCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT--EYTTSIDIWSAGCVLAELLLGQPLFPGENAVD-QLVEIIKVLG 254 (376)
Q Consensus 178 l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~~~~~~ 254 (376)
|+|||+|+...+.....+.+|||.|.|||++.+.. .+..++|+||+||++|.+++|.+||.+..... ..++|.+.
T Consensus 320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G-- 397 (475)
T KOG0615|consen 320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG-- 397 (475)
T ss_pred ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC--
Confidence 99999999988777788999999999999996533 24458899999999999999999998765544 44444431
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
.| .+....+.++++++++||++||.+||++|||++|+|+||||+...
T Consensus 398 ---------------~y--------~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 398 ---------------RY--------AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred ---------------cc--------cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 11 112234567899999999999999999999999999999998653
No 6
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.7e-58 Score=384.08 Aligned_cols=279 Identities=38% Similarity=0.683 Sum_probs=243.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|...++||+|.||.||+|++..+|+.||||++.... ....+|++.|+.++|+||+.++++| .....+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCce
Confidence 57999999999999999999999999999999996542 2345899999999999999999999 555558
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
.||+||++.+|...++. ....++...++.++.+++.||+|||+ +.|+||||||.|+|+++ ++.+||+|||+++..
T Consensus 77 ~lVfEfm~tdLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~-~g~lKiADFGLAr~f 151 (318)
T KOG0659|consen 77 SLVFEFMPTDLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISS-DGQLKIADFGLARFF 151 (318)
T ss_pred EEEEEeccccHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcC-CCcEEeecccchhcc
Confidence 89999999999888876 46779999999999999999999999 89999999999999997 889999999999988
Q ss_pred ccCCCcc-eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEANI-SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.+..... ..+.|.||+|||++.|...|+..+||||.|||+.||+-|.+.|+|.++.+++..++..+|+|..+.|+.+..
T Consensus 152 ~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 152 GSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred CCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccc
Confidence 7554433 347799999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
-.....+......+....|+ ..+.++.||+.+||.+||.+|+|+.|+|+||||+..
T Consensus 232 lpdY~~~~~~P~~~~~~lf~-aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNNLFP-AASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred cccHHHHhcCCCCccccccc-cccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 33332333333444444444 578889999999999999999999999999999974
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-58 Score=401.36 Aligned_cols=258 Identities=31% Similarity=0.516 Sum_probs=224.3
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
....++|+++++||+|+||+||+++.+.+++.||+|++.+.. .....|..+|..++||+||+++..| +
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-----Q 95 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-----Q 95 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-----c
Confidence 456789999999999999999999999999999999986643 2334699999999999999999998 6
Q ss_pred CceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
+...+|+|+||+.| .|...|. .++.++|..++.++.+|+.||.|||+ +||+||||||+|||+|. +|.++|+||
T Consensus 96 t~~kLylVld~~~GGeLf~hL~----~eg~F~E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~-~GHi~LtDF 169 (357)
T KOG0598|consen 96 TEEKLYLVLDYLNGGELFYHLQ----REGRFSEDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDE-QGHIKLTDF 169 (357)
T ss_pred cCCeEEEEEeccCCccHHHHHH----hcCCcchhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecC-CCcEEEecc
Confidence 77779999999997 4444444 46889999999999999999999999 79999999999999996 888999999
Q ss_pred CCcccccc-CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 182 GSAKVLVK-GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 182 g~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
|+|+.... +....+.+||+.|||||++.+.. |+.++|+||||+++|+|++|.+||.+.+.......+.+.-.
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~------ 242 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL------ 242 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC------
Confidence 99985544 44556779999999999998764 99999999999999999999999999998888888776310
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC----CHHHHhCCCccccccCCC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC----TALEACAHPFFDELREPN 327 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~----t~~ell~hp~~~~~~~~~ 327 (376)
...+..++.+++++|+++|++||++|. ++.++-+||||+.++|..
T Consensus 243 ----------------------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~ 291 (357)
T KOG0598|consen 243 ----------------------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEK 291 (357)
T ss_pred ----------------------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHH
Confidence 112334899999999999999999996 688999999999999874
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-57 Score=419.30 Aligned_cols=253 Identities=32% Similarity=0.549 Sum_probs=223.8
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-------ccchHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
.|.. .+|...+.||+|||+.||.+++..+|+.||+|++.+. .....+|+++.+.|+|||||+++++|
T Consensus 14 D~~~-~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F----- 87 (592)
T KOG0575|consen 14 DPRS-KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF----- 87 (592)
T ss_pred cCCc-ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----
Confidence 3344 6799999999999999999999999999999999653 23345799999999999999999999
Q ss_pred CCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEe
Q 017139 102 KDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 102 ~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
++..++|||.|+|. ++|.++++. ...++|.+++.++.||+.||.|||+ ++|+|||||..|+|++. +..|||+|
T Consensus 88 EDs~nVYivLELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~-~~~VKIgD 161 (592)
T KOG0575|consen 88 EDSNNVYIVLELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNE-NMNVKIGD 161 (592)
T ss_pred ecCCceEEEEEecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHHHHHHHh-cCceecccchhheeecC-cCcEEecc
Confidence 88888999999999 566666653 5789999999999999999999999 79999999999999996 77899999
Q ss_pred cCCccccccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 181 FGSAKVLVKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 181 fg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
||+|.....+ +...+.+|||.|.|||++... ..+..+||||+||++|.|++|++||...+-.+.+..|..
T Consensus 162 FGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~-gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~-------- 232 (592)
T KOG0575|consen 162 FGLATQLEYDGERKKTLCGTPNYIAPEVLNKS-GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL-------- 232 (592)
T ss_pred cceeeeecCcccccceecCCCcccChhHhccC-CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh--------
Confidence 9999888754 677889999999999999754 489999999999999999999999999888888887766
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
.++. +|..+|.+++|||.+||+.||.+|||++++|.|+||+.-
T Consensus 233 ---------~~Y~------------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 233 ---------NEYS------------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred ---------cCcc------------cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 2333 445789999999999999999999999999999999543
No 9
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.5e-56 Score=427.67 Aligned_cols=330 Identities=51% Similarity=0.962 Sum_probs=283.5
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecC---CCCceeEE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTT---SKDELFLN 108 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~---~~~~~~~~ 108 (376)
..++|.+++.||+|+||.||+|.+..+++.||||++..+.....+|+.+++.++||||+++++++.... .....+++
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence 346799999999999999999999999999999999877777778999999999999999998875432 13345788
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||||++++...+..+......+++..++.++.||+.||+|||+ +||+||||||+|||++.+++.+||+|||+++...
T Consensus 144 lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~ 222 (440)
T PTZ00036 144 VVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL 222 (440)
T ss_pred EEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence 999999999888887766667889999999999999999999999 7999999999999998656679999999998766
Q ss_pred cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 189 KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 189 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
.........||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+++.++.+..+.+..+.+.+
T Consensus 223 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 302 (440)
T PTZ00036 223 AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNY 302 (440)
T ss_pred CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhh
Confidence 55555567889999999998776668999999999999999999999999999999999999999999999988888888
Q ss_pred cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCC-CCCCCCCCCchhh-h
Q 017139 269 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPN-GRPFPPLFNFKQE-L 346 (376)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~ 346 (376)
..+.++......+...++...+.++++||.+||++||.+|+|+.|+|+||||..+.++....+. ....+.+++|... .
T Consensus 303 ~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (440)
T PTZ00036 303 ADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCDAEI 382 (440)
T ss_pred hcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcccccCCCCCCCCCCCcCCCHHHH
Confidence 8888888877788888888899999999999999999999999999999999998776444332 2356677788753 3
Q ss_pred hcCCHHHHhhhcHHHH
Q 017139 347 AGASPELINRLIPEHV 362 (376)
Q Consensus 347 ~~~~~~~~~~~~~~~~ 362 (376)
....++....+++...
T Consensus 383 ~~~~~~~~~~~~~~~~ 398 (440)
T PTZ00036 383 KEMSDACRRKIIPKCT 398 (440)
T ss_pred hhCCHHHHHHHhhHHH
Confidence 3667777777666543
No 10
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1e-57 Score=391.86 Aligned_cols=285 Identities=31% Similarity=0.548 Sum_probs=248.7
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
+..++|+.+..|++|.||.||+|+++.+++.||+|+++-+.. ...+|+.+|..++|||||.+.++..... -
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~---~ 149 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN---M 149 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc---c
Confidence 566899999999999999999999999999999999965431 2348999999999999999999886533 2
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+|+|||||+.+|.+++... .++|...+++.++.|++.|++|||. +.|+||||||+|+|++. .|.+||+|||+|
T Consensus 150 d~iy~VMe~~EhDLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~-~wilHRDLK~SNLLm~~-~G~lKiaDFGLA 224 (419)
T KOG0663|consen 150 DKIYIVMEYVEHDLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHD-NWILHRDLKTSNLLLSH-KGILKIADFGLA 224 (419)
T ss_pred ceeeeeHHHHHhhHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhh-ceeEecccchhheeecc-CCcEEecccchh
Confidence 338899999999988888763 4789999999999999999999999 79999999999999995 888999999999
Q ss_pred cccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 185 KVLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 185 ~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+.+.+... .+..+.|.||+|||++++...|+.+.|+||+|||+.||+++.+.|++....+++.+|++.+|+|+..-|+.
T Consensus 225 R~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 225 REYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred hhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 99876644 45567799999999999999999999999999999999999999999999999999999999999988876
Q ss_pred cCc--CCcCccCCCCCCCCcccccccC-CChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 264 MNP--NYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 264 ~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
... .+....++...-.+++..|+.. +++...+|++.+|.+||.+|+||+|.|.|+||.+.
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 542 2233455555555566666554 78999999999999999999999999999999974
No 11
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-57 Score=408.37 Aligned_cols=285 Identities=35% Similarity=0.597 Sum_probs=242.4
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
.|...+.|+..++||+|.||.||+|++..+|+.||+|++..+. ....+|+.+|++|+||||+++.+.....
T Consensus 112 ~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~--- 188 (560)
T KOG0600|consen 112 GPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK--- 188 (560)
T ss_pred cccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---
Confidence 4567789999999999999999999999999999999996553 3446899999999999999999988653
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
....+|+|+|||+.+|.-++.. ..-.|++.+++.++.||+.||+|||+ +||+|||||.+|||||. ++.+||+|||
T Consensus 189 ~~~siYlVFeYMdhDL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn-~G~LKiaDFG 263 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDHDLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDN-NGVLKIADFG 263 (560)
T ss_pred CCceEEEEEecccchhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcC-CCCEEecccc
Confidence 3456999999999988777764 34579999999999999999999999 89999999999999995 8999999999
Q ss_pred CccccccCC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 183 SAKVLVKGE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 183 ~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
+|++..... ..++.+.|.||+|||+++|...|+.++|+||+||||.||++|++.|++.+..+++..|.+.+|.|....
T Consensus 264 LAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 264 LARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred ceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhc
Confidence 999765543 456778899999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhhcCcC-CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 261 IRCMNPN-YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 261 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
|....-. +..+.-...-...+.+. -..+++.+.+|+..||+.||++|.||.++|+|+||..
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred cccccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 8722211 11111111112222333 3468999999999999999999999999999999943
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-57 Score=408.23 Aligned_cols=256 Identities=33% Similarity=0.589 Sum_probs=227.8
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-------ccchHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
+...+|.+++.||.|+|++|++|+++.+++.||||++.+. ..+..+|.+.|..| .||.|++++..| +
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF-----Q 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF-----Q 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----e
Confidence 4457999999999999999999999999999999988543 24455799999999 899999999998 6
Q ss_pred CceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
++..+|+|+||++ |+|+++++++ +.|++.-.+.++.||+.||+|||+ +|||||||||+|||+|. ++++||+||
T Consensus 145 D~~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~-dmhikITDF 218 (604)
T KOG0592|consen 145 DEESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDK-DGHIKITDF 218 (604)
T ss_pred cccceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcC-CCcEEEeec
Confidence 6666999999999 6888888875 779999999999999999999999 79999999999999997 889999999
Q ss_pred CCccccccCCC--------------cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 017139 182 GSAKVLVKGEA--------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLV 247 (376)
Q Consensus 182 g~~~~~~~~~~--------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~ 247 (376)
|.|+.+..... ..+++||..|.+||++... ..++.+|+|+||||+|+|+.|.+||.+.+....++
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~-~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq 297 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS-PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ 297 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC-CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH
Confidence 99987753211 1458999999999999654 58999999999999999999999999999999999
Q ss_pred HHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 248 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
+|++.. | .|++++++.++|||+++|..||++|+|+++|.+||||.+++|.+
T Consensus 298 kI~~l~-----------------y------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 298 KIQALD-----------------Y------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN 348 (604)
T ss_pred HHHHhc-----------------c------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence 998842 1 15568899999999999999999999999999999999999876
No 13
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-56 Score=391.22 Aligned_cols=255 Identities=31% Similarity=0.560 Sum_probs=215.1
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-----ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.+.+.++.||+|..|+||+|+++.+++.+|+|++... .+...+|+++++..+|||||++|++|+.... .++
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~----~is 154 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE----EIS 154 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc----eEE
Confidence 3678899999999999999999999999999999433 2334589999999999999999999965432 488
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||+| +|...++. .++++|..+..++.+++.||.|||+..+|+||||||+|||+++ .+.|||||||.+...
T Consensus 155 I~mEYMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs-kGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS-KGEVKICDFGVSGIL 229 (364)
T ss_pred eehhhcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc-CCCEEeccccccHHh
Confidence 99999995 66665554 3779999999999999999999994369999999999999997 889999999999887
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE-----NAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
.+. ...+++||..|||||.+.+.. |+.++||||||++++|+++|++||... +..+.+..|+. .+++
T Consensus 230 vnS-~a~tfvGT~~YMsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~---~ppP---- 300 (364)
T KOG0581|consen 230 VNS-IANTFVGTSAYMSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD---EPPP---- 300 (364)
T ss_pred hhh-hcccccccccccChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc---CCCC----
Confidence 766 667899999999999998765 999999999999999999999999874 33444444433 1111
Q ss_pred hcCcCCcCccCCCCCCCCcccccccC-CChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
.+|.. +|+++++||..||++||.+|+|+.|+++|||+++....+
T Consensus 301 ---------------------~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~ 345 (364)
T KOG0581|consen 301 ---------------------RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN 345 (364)
T ss_pred ---------------------CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence 13333 799999999999999999999999999999999765543
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-55 Score=371.70 Aligned_cols=256 Identities=29% Similarity=0.486 Sum_probs=225.3
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
.|...++|++.+.||.|+||+|.+++++.+|..||+|++.+... ....|..+|+.+.||+++++.+.+
T Consensus 39 ~~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~----- 113 (355)
T KOG0616|consen 39 NPYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF----- 113 (355)
T ss_pred CCcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----
Confidence 34667899999999999999999999999999999999976532 223689999999999999999888
Q ss_pred CCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEe
Q 017139 102 KDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
.+..++|+||||++|+ |.++++ ..+++++..++.++.||+.||+|||+ .+|++|||||+|||+|+ +|.+||+|
T Consensus 114 ~d~~~lymvmeyv~GGElFS~Lr----k~~rF~e~~arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~-~G~iKitD 187 (355)
T KOG0616|consen 114 KDNSNLYMVMEYVPGGELFSYLR----KSGRFSEPHARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQ-NGHIKITD 187 (355)
T ss_pred ccCCeEEEEEeccCCccHHHHHH----hcCCCCchhHHHHHHHHHHHHHHHHh-cCeeeccCChHHeeecc-CCcEEEEe
Confidence 7777899999999975 444443 46889999999999999999999999 79999999999999997 88899999
Q ss_pred cCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 181 FGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 181 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
||+|+.... ...+.+|||.|+|||++.... |+.++|+|||||++|||+.|.+||.+.+....+.+|++.
T Consensus 188 FGFAK~v~~--rT~TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~-------- 256 (355)
T KOG0616|consen 188 FGFAKRVSG--RTWTLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG-------- 256 (355)
T ss_pred ccceEEecC--cEEEecCCccccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC--------
Confidence 999987643 367889999999999997655 999999999999999999999999999999999988873
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCCC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPN 327 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~~ 327 (376)
++ .||..++++++|||+++|++|-.+|. ...++.+||||+.+.|..
T Consensus 257 ---------~v------------~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~ 307 (355)
T KOG0616|consen 257 ---------KV------------KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEA 307 (355)
T ss_pred ---------cc------------cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHH
Confidence 22 25567899999999999999999994 567999999999998864
No 15
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.8e-54 Score=374.31 Aligned_cols=291 Identities=34% Similarity=0.677 Sum_probs=244.6
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCC-eeecceeeeecCC-CCc
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPN-VISLKHCFFSTTS-KDE 104 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~-Iv~~~~~~~~~~~-~~~ 104 (376)
...|..+++||+|+||+||+|+.+.+|+.||+|++..+.. ...+|+.+++.++|+| |+.+++++.+... ...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 5568889999999999999999999999999999865433 2358999999999999 9999999865441 233
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+++|+||++-+|..++.........++...++.++.||+.||+|||+ ++|+||||||+|||+++ ++.+||+|||+|
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~-~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISS-SGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECC-CCcEeeeccchH
Confidence 4689999999998888887754333567778999999999999999999 79999999999999997 889999999999
Q ss_pred cccc-cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 185 KVLV-KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 185 ~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+... +.......++|.+|+|||++.+...|+...||||+|||++||+++++.|++....+++..|.+.+|+|..+.|+.
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 9776 334466778899999999999998899999999999999999999999999999999999999999999988876
Q ss_pred cCcC--CcCccCCCCC-CCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 264 MNPN--YTDFRFPQIK-AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 264 ~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
...- +.. .++... ...+.... +..+++..+++.+||+.+|.+|.|+..+|.||||.......
T Consensus 248 v~~~~~~k~-~f~~~~~~~~l~~~~-~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 248 VSSLPDYKA-PFPKWPGPKDLSSIL-PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS 312 (323)
T ss_pred ccccccccc-cCcCCCCccchHHhc-cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence 5422 111 333333 22333333 34557999999999999999999999999999999876554
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=6.8e-54 Score=389.54 Aligned_cols=268 Identities=33% Similarity=0.535 Sum_probs=224.2
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
..++|.++++||+|+||.||+|+.+.||..||+|++++..- ....|.++|...++|.||+++..| ++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-----QD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-----QDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-----cCC
Confidence 56899999999999999999999999999999999976542 234688999999999999999999 888
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
.++||||||++| ++-.+|.. ...|++..++.++.+++.|++.||+ .|++||||||+|+|||. .|.+||+|||+
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~-~GHiKLSDFGL 287 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDA-KGHIKLSDFGL 287 (550)
T ss_pred CeeEEEEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecC-CCCEeeccccc
Confidence 889999999997 44444443 5889999999999999999999999 69999999999999997 88899999999
Q ss_pred cccccc-----------------------CCC-------------------------cceeeccccccChhhhhCCCCCC
Q 017139 184 AKVLVK-----------------------GEA-------------------------NISYICSRYYRAPELIFGATEYT 215 (376)
Q Consensus 184 ~~~~~~-----------------------~~~-------------------------~~~~~~t~~y~aPE~~~~~~~~~ 215 (376)
|..... ... ..+.+|||-|+|||++.+.. |+
T Consensus 288 s~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~ 366 (550)
T KOG0605|consen 288 STGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YG 366 (550)
T ss_pred cchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CC
Confidence 843211 000 02467999999999999876 99
Q ss_pred ccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHH
Q 017139 216 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAID 295 (376)
Q Consensus 216 ~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (376)
..+|+||||||+|||+.|.+||.+.++.+...+|+..-.. +.+|. ...++++++|
T Consensus 367 ~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~---------------l~fP~----------~~~~s~eA~D 421 (550)
T KOG0605|consen 367 KECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET---------------LKFPE----------EVDLSDEAKD 421 (550)
T ss_pred ccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh---------------ccCCC----------cCcccHHHHH
Confidence 9999999999999999999999999999999988763111 11111 1246899999
Q ss_pred HHHhhcCCCCCCCCC---HHHHhCCCccccccCCCCCCCCCCCCCC
Q 017139 296 LASRLLQYSPSLRCT---ALEACAHPFFDELREPNARLPNGRPFPP 338 (376)
Q Consensus 296 li~~~L~~dP~~R~t---~~ell~hp~~~~~~~~~~~~~~~~~~~~ 338 (376)
||.+||+ ||.+|.. ++||.+||||+.++|...+-.. .+|.|
T Consensus 422 LI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~-apfvP 465 (550)
T KOG0605|consen 422 LITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMP-APFVP 465 (550)
T ss_pred HHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcCC-CCCCC
Confidence 9999999 9999985 8999999999999998766443 34444
No 17
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-54 Score=399.34 Aligned_cols=284 Identities=30% Similarity=0.515 Sum_probs=237.7
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccch-------HHHHHHHHhCC-CCCeeecceeeeecCC
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMD-HPNVISLKHCFFSTTS 101 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------~~e~~~l~~l~-h~~Iv~~~~~~~~~~~ 101 (376)
+...++|++.++||+|+||+|++|..+.+++.||||+++++.... ..|..++...+ ||+++.++.+|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 345689999999999999999999999999999999998765433 35677777664 99999999999
Q ss_pred CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 102 KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
+...++|+||||+.|+. +.+ ....+.+++..++.|+.+|+.||+|||+ +||||||||.+|||+|. +|.+||+||
T Consensus 439 QT~~~l~fvmey~~Ggd---m~~-~~~~~~F~e~rarfyaAev~l~L~fLH~-~~IIYRDlKLdNiLLD~-eGh~kiADF 512 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGD---LMH-HIHTDVFSEPRARFYAAEVVLGLQFLHE-NGIIYRDLKLDNLLLDT-EGHVKIADF 512 (694)
T ss_pred ccCCeEEEEEEecCCCc---EEE-EEecccccHHHHHHHHHHHHHHHHHHHh-cCceeeecchhheEEcc-cCcEEeccc
Confidence 77777999999999874 222 2335789999999999999999999999 89999999999999997 788999999
Q ss_pred CCccccc-cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 182 GSAKVLV-KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 182 g~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
|+++..- .+....+.+|||.|+|||++.+.. |+.++|+|||||+||+|+.|..||++.+.++....|+..
T Consensus 513 GlcKe~m~~g~~TsTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d-------- 583 (694)
T KOG0694|consen 513 GLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND-------- 583 (694)
T ss_pred ccccccCCCCCccccccCChhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--------
Confidence 9998765 455667889999999999997654 999999999999999999999999999999999888762
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCCCC-CCCCCC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPNA-RLPNGR 334 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~~~-~~~~~~ 334 (376)
+.. +|..+|.++.++++++|.+||.+|.. ++++..||||+.++|... .....+
T Consensus 584 ---------~~~------------yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~P 642 (694)
T KOG0694|consen 584 ---------EVR------------YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKP 642 (694)
T ss_pred ---------CCC------------CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCC
Confidence 222 45678999999999999999999986 478999999999998642 112233
Q ss_pred CCCCC-------CCchhhhhcCCHHHH
Q 017139 335 PFPPL-------FNFKQELAGASPELI 354 (376)
Q Consensus 335 ~~~~~-------~~~~~~~~~~~~~~~ 354 (376)
|+.|. -||++++++..+.+-
T Consensus 643 Pf~P~i~~~~D~snFd~eFt~e~p~Lt 669 (694)
T KOG0694|consen 643 PFVPTIKGPEDVSNFDEEFTSEKPALT 669 (694)
T ss_pred CCCcccCChhhhcccchhhhcCCCccC
Confidence 44443 478888887666554
No 18
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-53 Score=395.29 Aligned_cols=251 Identities=34% Similarity=0.543 Sum_probs=224.9
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
|.+++.||.|+-|.|-+|++..||+..|||++.+. ....++|+-+|+.+.|||++.+++++ ++..++|
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~~~ly 88 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENKQHLY 88 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccCceEE
Confidence 99999999999999999999999999999999776 44567899999999999999999999 7777899
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|.||++| .|.+++. ..+++++....+++.||+.|+.|||. .+|+||||||+|+|++. .+.+||+|||+|...
T Consensus 89 lvlEyv~gGELFdylv----~kG~l~e~eaa~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~-~~nIKIADFGMAsLe 162 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLV----RKGPLPEREAAHFFRQILDGVSYCHA-FNICHRDLKPENLLLDV-KNNIKIADFGMASLE 162 (786)
T ss_pred EEEEecCCchhHHHHH----hhCCCCCHHHHHHHHHHHHHHHHHhh-hcceeccCCchhhhhhc-ccCEeeeccceeecc
Confidence 99999996 4444444 46889999999999999999999999 59999999999999997 555999999999998
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.++....+.||+|.|.|||++.|..+.+.++||||+|||||.|++|+.||.+.+....+.++.+.
T Consensus 163 ~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G--------------- 227 (786)
T KOG0588|consen 163 VPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG--------------- 227 (786)
T ss_pred cCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC---------------
Confidence 88888889999999999999999988899999999999999999999999988777777666541
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.|. +|..+|+++++||.+||.+||++|+|.+|++.|||+......
T Consensus 228 --~f~------------MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~ 272 (786)
T KOG0588|consen 228 --VFE------------MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSL 272 (786)
T ss_pred --ccc------------CCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence 222 446799999999999999999999999999999999887654
No 19
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-53 Score=374.78 Aligned_cols=256 Identities=29% Similarity=0.526 Sum_probs=221.0
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
....++|.+.+.||.|+||+||+|+++.++..||||.+.+.. .....|+.+|+.++|||||.++++. +.
T Consensus 6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~ 80 (429)
T KOG0595|consen 6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----ED 80 (429)
T ss_pred ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ec
Confidence 345678999999999999999999999999999999996653 2345799999999999999999999 66
Q ss_pred ceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCC--C---CcEE
Q 017139 104 ELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL--T---HQVK 177 (376)
Q Consensus 104 ~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~--~---~~~k 177 (376)
+.++|+|||||+ |+|..++.. .+.+++..++.++.||+.||++||+ ++|+||||||+|||++.. + -.+|
T Consensus 81 ~~~i~lVMEyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 81 DDFIYLVMEYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred CCeEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEE
Confidence 667999999999 577777765 4689999999999999999999999 899999999999999752 1 4699
Q ss_pred EEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 178 LCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 178 l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
|+|||+|+...+.....+.+|+|.|||||++... .|+.++|+||+|+|+|++++|++||...+..+.+..+.+...
T Consensus 156 IADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~-~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~--- 231 (429)
T KOG0595|consen 156 IADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQ-QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE--- 231 (429)
T ss_pred ecccchhhhCCchhHHHHhhCCccccCHHHHHhc-cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc---
Confidence 9999999999988888899999999999999754 599999999999999999999999999998888774433111
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
....++..++..+.+++...|+.+|..|.+..+-+.||++..
T Consensus 232 -----------------------~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 232 -----------------------IVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred -----------------------ccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 111234457888889999999999999999999999999864
No 20
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.6e-52 Score=390.15 Aligned_cols=278 Identities=36% Similarity=0.629 Sum_probs=230.9
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchH---HHHHHHHhCC-C-----CCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---RELQLMRLMD-H-----PNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~e~~~l~~l~-h-----~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|.|.+.||+|+||+|.+|.+..|++.||||+++....+.. .|+.+|..++ | -|+|+++++| -...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr~ 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFRN 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----cccc
Confidence 79999999999999999999999999999999987765544 5888888887 3 4899999999 5555
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec-CCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD-PLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~-~~~~~~kl~Dfg~~ 184 (376)
++|||+|.++-+|+++++.... ..++...++.++.||+.||.+||+ .||||+||||||||+. .....|||+|||.+
T Consensus 262 HlciVfELL~~NLYellK~n~f--~Glsl~~ir~~~~Qil~~L~~L~~-l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 262 HLCIVFELLSTNLYELLKNNKF--RGLSLPLVRKFAQQILTALLFLHE-LGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred ceeeeehhhhhhHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCChhheeeccCCcCceeEEecccc
Confidence 6999999999999999998654 459999999999999999999999 6999999999999995 33457999999999
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.... ....+++.+++|+|||+++|.+ |+.+.||||||||++||++|.+.|+|.+..+++..|++.+|.|+...+...
T Consensus 339 c~~~--q~vytYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~ 415 (586)
T KOG0667|consen 339 CFES--QRVYTYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTA 415 (586)
T ss_pred cccC--CcceeeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 8643 3333888999999999999876 999999999999999999999999999999999999999999998877643
Q ss_pred CcCCcCc-----------------------------------cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC
Q 017139 265 NPNYTDF-----------------------------------RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 309 (376)
Q Consensus 265 ~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 309 (376)
......+ ..|. ....+...+...-...+.|||++||.+||.+|+
T Consensus 416 ~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~-~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 416 KKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPP-GSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred cccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCC-CCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 2211110 0110 111222222223335679999999999999999
Q ss_pred CHHHHhCCCcccccc
Q 017139 310 TALEACAHPFFDELR 324 (376)
Q Consensus 310 t~~ell~hp~~~~~~ 324 (376)
|+.++|+||||+...
T Consensus 495 tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 495 TPAQALNHPFLTGTS 509 (586)
T ss_pred CHHHHhcCccccccc
Confidence 999999999998543
No 21
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-54 Score=364.63 Aligned_cols=256 Identities=29% Similarity=0.495 Sum_probs=215.6
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
...+|.|+++||.|+||.||+|.+..+|..+|.|.+.-+ +...-.|+.+|+.|+|||||++++.-+. +++.
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~~e 93 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---EDNE 93 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---ccch
Confidence 345799999999999999999999999999999988532 2334479999999999999999883322 4444
Q ss_pred eEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc--CC-CceeccCCCCCeeecCCCCcEEEEec
Q 017139 106 FLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT--VP-GVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 106 ~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~--~~-~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
.++||||||+ |+|...+++++.....++|..+|+++.|++.||..||+ -+ -|+||||||.||+++. +|.+||+||
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~-~gvvKLGDf 172 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA-NGVVKLGDF 172 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC-CCceeeccc
Confidence 5899999999 79999999999999999999999999999999999998 21 2899999999999996 889999999
Q ss_pred CCccccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 182 GSAKVLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 182 g~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
|+++...+... ..+.+|||+||+||.+.+.+ |+.+|||||+||++|||+.-++||.+.+-.+...+|.+.--.|
T Consensus 173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~---- 247 (375)
T KOG0591|consen 173 GLGRFLSSKTTFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP---- 247 (375)
T ss_pred hhHhHhcchhHHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC----
Confidence 99998865543 45789999999999998765 9999999999999999999999999997666666665531111
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccc-cCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
+| ..+|.++..+|..|+++||..||+. +|++.++..
T Consensus 248 ------------------------~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~~ 284 (375)
T KOG0591|consen 248 ------------------------LPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQS 284 (375)
T ss_pred ------------------------CcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHHH
Confidence 12 3578999999999999999999986 566655433
No 22
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-54 Score=356.71 Aligned_cols=260 Identities=30% Similarity=0.461 Sum_probs=223.0
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecc------cccchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~------~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
...++|.+.++||+|+|+.|+++.+..+|+.+|+|++.. +....++|+.+.+.|+||||+++++.+ ...
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~ 82 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEE 82 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----ccc
Confidence 456789999999999999999999999999999998742 234567899999999999999999988 777
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC--CCCcEEEEec
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP--LTHQVKLCDF 181 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~--~~~~~kl~Df 181 (376)
.+.|+|+|++.| +|...+-.. ...+|..+..++.||+.||.|||. +||+|||+||+|+++-+ .+.-+||+||
T Consensus 83 ~~~ylvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~vKL~~F 157 (355)
T KOG0033|consen 83 SFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAVKLADF 157 (355)
T ss_pred ceeEEEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCceeeccc
Confidence 889999999997 555555442 557899999999999999999999 89999999999999943 2446999999
Q ss_pred CCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 182 GSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 182 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
|+|.....+..-....|||.|||||++...+ |+..+|||+.|||||-|+.|.+||.+.+....+++|++.-
T Consensus 158 GvAi~l~~g~~~~G~~GtP~fmaPEvvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~-------- 228 (355)
T KOG0033|consen 158 GLAIEVNDGEAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA-------- 228 (355)
T ss_pred ceEEEeCCccccccccCCCcccCHHHhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc--------
Confidence 9999887666666788999999999997665 9999999999999999999999999999888888887731
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
+.++ ...++.+++++++||++||..||++|+|+.|+|+|||+++-..-
T Consensus 229 ---------yd~~--------~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~ 276 (355)
T KOG0033|consen 229 ---------YDYP--------SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERV 276 (355)
T ss_pred ---------cCCC--------CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHH
Confidence 1111 12446789999999999999999999999999999999875443
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-52 Score=383.60 Aligned_cols=253 Identities=33% Similarity=0.511 Sum_probs=218.4
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc---------ccchHHHHHHHHhCC-CCCeeecceeeeecC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD---------RRYKNRELQLMRLMD-HPNVISLKHCFFSTT 100 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---------~~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~ 100 (376)
...+.|.+++.||+|+||+|++|.+..+++.||+|++.+. .....+|+.+++++. ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 4566899999999999999999999999999999976543 123347999999999 999999999994
Q ss_pred CCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEE
Q 017139 101 SKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLC 179 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~ 179 (376)
....+|+|||||.| .|.+.+.. .+++.|..++.++.|++.|++|||+ +||+||||||+|||++.+.+++||+
T Consensus 91 --t~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~~~Kl~ 163 (370)
T KOG0583|consen 91 --TPTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEGNLKLS 163 (370)
T ss_pred --cCCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCCCEEEe
Confidence 34449999999996 66666654 5789999999999999999999999 7999999999999999743889999
Q ss_pred ecCCcccc-ccCCCcceeeccccccChhhhhCCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 180 DFGSAKVL-VKGEANISYICSRYYRAPELIFGAT-EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 180 Dfg~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
|||++... .......+.+||+.|+|||++.+.. +-+.++||||+||+||.|++|..||...+.......+.+
T Consensus 164 DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~------ 237 (370)
T KOG0583|consen 164 DFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK------ 237 (370)
T ss_pred ccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc------
Confidence 99999988 4666778899999999999998766 457899999999999999999999999777777766544
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCC-ChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRM-PPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
..+. ++..+ |+++++|+.+||..||.+|+|+.++++||||+.
T Consensus 238 -----------~~~~------------~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 238 -----------GEFK------------IPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred -----------CCcc------------CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1222 33456 999999999999999999999999999999996
No 24
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.5e-50 Score=366.82 Aligned_cols=278 Identities=33% Similarity=0.639 Sum_probs=230.2
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
+.++|++.+.||.|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++ .....
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~ 77 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERC 77 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCe
Confidence 3567999999999999999999999999999999885432 2344799999999999999999988 44556
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+++||||++++|.+.+.. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+++.
T Consensus 78 ~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~-~~~~kl~DfG~~~~ 152 (288)
T cd07871 78 LTLVFEYLDSDLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINE-KGELKLADFGLARA 152 (288)
T ss_pred EEEEEeCCCcCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEECcCcceee
Confidence 899999999988777654 23457899999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
..... ......+++.|+|||++.+...++.++|+||+||++|+|++|.+||.+.+..+.+..+....+.+..+.+....
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 153 KSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred ccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 43322 22345678999999998765668999999999999999999999999999999999999999999888776543
Q ss_pred c--CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 266 P--NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. .+..+.++.....++... ...++.+++|||++||++||.+|||++|+|+||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINH-APRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred cchhhhccccCccCCCchHHh-CCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 2 223333443333333322 24678999999999999999999999999999998
No 25
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-51 Score=362.59 Aligned_cols=276 Identities=27% Similarity=0.435 Sum_probs=229.4
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
..+.|++++.||.|.-|+||+|+...++..+|+|++.+.. ...+.|.+||..++||+++.+|+.| +.+
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-----et~ 149 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-----ETD 149 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee-----ecc
Confidence 3467899999999999999999999999999999996543 2334699999999999999999999 788
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+.|+|||||+|+-+..+.+ .+.+..+++..++.++.+++.||+|||. -|||+|||||+||||.. +|.|.|+||.++
T Consensus 150 ~~~cl~meyCpGGdL~~Lrq-kQp~~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvre-dGHIMLsDFDLS 226 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQ-KQPGKRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVRE-DGHIMLSDFDLS 226 (459)
T ss_pred ceeEEEEecCCCccHHHHHh-hCCCCccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEec-CCcEEeeecccc
Confidence 88999999999754444443 3457889999999999999999999999 49999999999999996 888999999886
Q ss_pred ccccc-----------------------------------C----------------------CCcceeeccccccChhh
Q 017139 185 KVLVK-----------------------------------G----------------------EANISYICSRYYRAPEL 207 (376)
Q Consensus 185 ~~~~~-----------------------------------~----------------------~~~~~~~~t~~y~aPE~ 207 (376)
..... . ....+.+||-+|.|||+
T Consensus 227 ~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEv 306 (459)
T KOG0610|consen 227 LRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEV 306 (459)
T ss_pred ccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccccee
Confidence 32210 0 01125678999999999
Q ss_pred hhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCccccccc
Q 017139 208 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK 287 (376)
Q Consensus 208 ~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (376)
+.+.. .+.++|+|+|||.+|||+.|..||.+.+..+.+.+++.. +..+|.. .
T Consensus 307 I~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~-----------------~l~Fp~~----------~ 358 (459)
T KOG0610|consen 307 IRGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ-----------------PLKFPEE----------P 358 (459)
T ss_pred eecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC-----------------CCcCCCC----------C
Confidence 98765 899999999999999999999999999999999988763 1222221 2
Q ss_pred CCChhHHHHHHhhcCCCCCCCCC----HHHHhCCCccccccCCCCCCCCCCCCCCCCCch
Q 017139 288 RMPPEAIDLASRLLQYSPSLRCT----ALEACAHPFFDELREPNARLPNGRPFPPLFNFK 343 (376)
Q Consensus 288 ~~~~~~~~li~~~L~~dP~~R~t----~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (376)
.++..++|||+++|.+||++|+. |.||.+||||+.++|...+....+.+|...+..
T Consensus 359 ~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~d~~ 418 (459)
T KOG0610|consen 359 EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPVDGG 418 (459)
T ss_pred cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCccccC
Confidence 46889999999999999999998 999999999999999976665555555554443
No 26
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-51 Score=363.94 Aligned_cols=259 Identities=32% Similarity=0.535 Sum_probs=210.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc----ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
..+|..++.||+|+||.||++.+..+|+.+|+|.+... .....+|+.+|+.++|||||+.++..... +...++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~---~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR---ENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc---cCeeeE
Confidence 56799999999999999999999999999999998665 34467899999999999999998864221 114688
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|||+++ +|.+.+..+. ..+++..++.+..||+.||+|||+ +||+||||||+|||++..++.+||+|||++...
T Consensus 93 i~mEy~~~GsL~~~~~~~g---~~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYG---GKLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeeccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 99999995 7767666532 269999999999999999999999 899999999999999964578999999998876
Q ss_pred cc----CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VK----GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE-NAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
.. ........||+.|||||++......++++|||||||++.||+||..||... ...+.+..+....
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~--------- 239 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED--------- 239 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC---------
Confidence 53 223446789999999999975322345999999999999999999999873 3333222222110
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
....++..+|.++++||.+||.+||.+||||+++|+|||.+....
T Consensus 240 ------------------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 240 ------------------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ------------------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 011356679999999999999999999999999999999986443
No 27
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-50 Score=363.07 Aligned_cols=258 Identities=28% Similarity=0.441 Sum_probs=214.6
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------------------cchHHHHHHHHhCCCCCeeec
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------------RYKNRELQLMRLMDHPNVISL 92 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------------------~~~~~e~~~l~~l~h~~Iv~~ 92 (376)
+..++|++.+.||+|.||+|-+|++..+++.||||++.+.. ....+|+.+|+++.|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 67789999999999999999999999999999999985432 123479999999999999999
Q ss_pred ceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCC
Q 017139 93 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL 172 (376)
Q Consensus 93 ~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~ 172 (376)
+++.- +.....+|+|+|||..+ .+.........+++.+++.|+..++.||+|||. +||+||||||+|+|++.
T Consensus 174 iEvLD---DP~s~~~YlVley~s~G---~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl~~- 245 (576)
T KOG0585|consen 174 IEVLD---DPESDKLYLVLEYCSKG---EVKWCPPDKPELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLLSS- 245 (576)
T ss_pred EEeec---CcccCceEEEEEeccCC---ccccCCCCcccccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEEcC-
Confidence 99873 35566699999999954 222222223339999999999999999999999 79999999999999996
Q ss_pred CCcEEEEecCCcccccc------CCCcceeeccccccChhhhhC---CCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 017139 173 THQVKLCDFGSAKVLVK------GEANISYICSRYYRAPELIFG---ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 243 (376)
Q Consensus 173 ~~~~kl~Dfg~~~~~~~------~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 243 (376)
++.+||+|||.+..... .......+|||.|+|||.+.+ ....+.+.||||+||+||.|+.|+.||.+....
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 79999999999876622 222335789999999999876 233577899999999999999999999999988
Q ss_pred HHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 244 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
+...+|+.. ...+|. .+.+.++++|||.+||++||.+|+++.++..|||...-
T Consensus 326 ~l~~KIvn~-----------------pL~fP~----------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 326 ELFDKIVND-----------------PLEFPE----------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHhcC-----------------cccCCC----------cccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 888888762 222222 12468999999999999999999999999999999764
No 28
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.8e-49 Score=367.93 Aligned_cols=318 Identities=36% Similarity=0.642 Sum_probs=239.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++......+...+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5999999999999999999999999999999886421 2244799999999999999999988655444445689
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||||+++|.+.+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||+++...
T Consensus 81 lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~-~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELMESDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANA-DCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCCCCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCcEEEccCccccccc
Confidence 9999999888777654 4569999999999999999999999 79999999999999996 7889999999987643
Q ss_pred cCCC----cceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 189 KGEA----NISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 189 ~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
.... .....+++.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+....+.+....+..
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR 234 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 3221 1245689999999998542 3588999999999999999999999999888888888888888887765543
Q ss_pred cCcCCcC-c--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCCCCCCCCC
Q 017139 264 MNPNYTD-F--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLF 340 (376)
Q Consensus 264 ~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~~~~~~~~ 340 (376)
....... + ........++...+ ..+++++.++|.+||+.||++|||++++++||||+.+...... +...+... .
T Consensus 235 i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~-~~~~~~~~-~ 311 (338)
T cd07859 235 VRNEKARRYLSSMRKKQPVPFSQKF-PNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVERE-PSAQPITK-L 311 (338)
T ss_pred hhhhhHHHHHHhhcccCCCchHHhc-CCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccccc-cccCcccc-c
Confidence 3211000 0 00000111111112 2468899999999999999999999999999999987665322 22232222 2
Q ss_pred CchhhhhcCCHHHHhhhcHHH
Q 017139 341 NFKQELAGASPELINRLIPEH 361 (376)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~ 361 (376)
.+.-+....+.+.+...+.++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~ 332 (338)
T cd07859 312 EFEFERRRLTKEDVRELIYRE 332 (338)
T ss_pred cccHHHHhcCHHHHHHHHHHH
Confidence 233233344555555554444
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.2e-51 Score=371.11 Aligned_cols=249 Identities=30% Similarity=0.546 Sum_probs=217.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccc------hHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY------KNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~------~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+..+. ..+|+++++.++||||+.+++.| +....+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 5799999999999999999999999999999998665432 45899999999999999999999 666779
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|+|||.|+|..++.. .+.++|+.++.++.+++.||.|||+ ++|.|||+||.|||+.+ ++.+|+||||+|+.+
T Consensus 77 ~vVte~a~g~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~-~~~~KlcdFg~Ar~m 150 (808)
T KOG0597|consen 77 WVVTEYAVGDLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEK-GGTLKLCDFGLARAM 150 (808)
T ss_pred EEEehhhhhhHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecC-CCceeechhhhhhhc
Confidence 99999999987777765 6789999999999999999999999 79999999999999997 888999999999988
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..+.. ..+..|||.|||||+..+. .|+..+|+||+|||+||+++|++||...........|..- +.
T Consensus 151 ~~~t~vltsikGtPlYmAPElv~e~-pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d---~v--------- 217 (808)
T KOG0597|consen 151 STNTSVLTSIKGTPLYMAPELVEEQ-PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD---PV--------- 217 (808)
T ss_pred ccCceeeeeccCcccccCHHHHcCC-CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC---CC---------
Confidence 76543 3466799999999999865 5999999999999999999999999887666655555441 11
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
..+..++.++.+|++.+|.+||.+|+|..+++.|||+++-
T Consensus 218 -----------------~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 218 -----------------KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred -----------------CCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 0234689999999999999999999999999999999764
No 30
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-49 Score=362.12 Aligned_cols=283 Identities=33% Similarity=0.555 Sum_probs=220.0
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .+...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeE
Confidence 467999999999999999999999999999999986432 2345799999999999999999988 445568
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||+++++.+.+.. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++...
T Consensus 79 ~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 79 TLVFEYVHTDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISD-TGELKLADFGLARAK 153 (303)
T ss_pred EEEEECCCcCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEECCCCcceec
Confidence 99999999988777754 23568999999999999999999999 79999999999999996 788999999998754
Q ss_pred ccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 188 VKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 188 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
... .......+++.|+|||++.+...++.++|+||+||++|+|++|..||.+.. ..+.+..+....+.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (303)
T cd07869 154 SVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVH 233 (303)
T ss_pred cCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchh
Confidence 322 222345678999999998766668899999999999999999999998754 445666676666766655443221
Q ss_pred cC--CcCccCCCCCCCCcccccc-cCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 266 PN--YTDFRFPQIKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 266 ~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.. +..-.+.......+...+. ...+.++.+||.+||++||++|||+.++++||||+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 234 SLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred hccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence 10 0000000001111111111 135678999999999999999999999999999987643
No 31
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-49 Score=351.82 Aligned_cols=276 Identities=26% Similarity=0.444 Sum_probs=225.5
Q ss_pred cCCCCCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeee
Q 017139 23 IGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFF 97 (376)
Q Consensus 23 ~~~~~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~ 97 (376)
.......|...+.|++..+||.|.-++||+|++..+++.||||++..+. ..+.+|+..++.++||||++++.+|.
T Consensus 15 ~~~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 15 SSSEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred ccccccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence 3345556777789999999999999999999999999999999996432 44568999999999999999999995
Q ss_pred ecCCCCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcE
Q 017139 98 STTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQV 176 (376)
Q Consensus 98 ~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~ 176 (376)
... .+|+||.||. |++.++++.+-. ..+.|..+..|+.+++.||.|||. +|.||||||+.||||+. +|.|
T Consensus 95 v~~-----~LWvVmpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~-dG~V 165 (516)
T KOG0582|consen 95 VDS-----ELWVVMPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDS-DGTV 165 (516)
T ss_pred ecc-----eeEEeehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcC-CCcE
Confidence 544 3999999999 588888887644 459999999999999999999999 79999999999999996 8899
Q ss_pred EEEecCCccccccCCCc-----ceeeccccccChhhh-hCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 017139 177 KLCDFGSAKVLVKGEAN-----ISYICSRYYRAPELI-FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 250 (376)
Q Consensus 177 kl~Dfg~~~~~~~~~~~-----~~~~~t~~y~aPE~~-~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~ 250 (376)
||+|||.+..+...... .+..||++|||||++ .....|+.++||||||++..||++|..||....+...+..-+
T Consensus 166 kLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL 245 (516)
T KOG0582|consen 166 KLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL 245 (516)
T ss_pred EEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence 99999987665443321 456789999999994 444569999999999999999999999999988877765443
Q ss_pred HhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 251 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
+ +.|+...... ....-.+.++..++.+|..||.+||++||||+++|+|+||+.....
T Consensus 246 q--n~pp~~~t~~-----------------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 246 Q--NDPPTLLTSG-----------------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred c--CCCCCccccc-----------------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence 3 4443211100 0011123567899999999999999999999999999999876553
No 32
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-50 Score=368.12 Aligned_cols=250 Identities=29% Similarity=0.495 Sum_probs=214.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
..|....+||+|+.|.||.|+...+++.||||.+.... .....|+.+|+..+|+|||.+++.|+.. ..+++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeEE
Confidence 47899999999999999999999999999999986443 3345799999999999999999998554 33899
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
||||++| +|.+.+.. ..++|.++..|+.+++.||+|||. +||+|||||.+|||++. ++.+||+|||+|....
T Consensus 348 VMEym~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~-~g~vKltDFGFcaqi~ 420 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTM-DGSVKLTDFGFCAQIS 420 (550)
T ss_pred EEeecCCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEecc-CCcEEEeeeeeeeccc
Confidence 9999996 55444443 559999999999999999999999 79999999999999997 8889999999988776
Q ss_pred cCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
... ...+.+|||+|||||++... .|++++||||||+++.||+-|.+||-..+....+..|.. .|+|...
T Consensus 421 ~~~~KR~TmVGTPYWMAPEVvtrk-~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~lk-------- 490 (550)
T KOG0578|consen 421 EEQSKRSTMVGTPYWMAPEVVTRK-PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKLK-------- 490 (550)
T ss_pred cccCccccccCCCCccchhhhhhc-ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCcC--------
Confidence 554 56688999999999999654 599999999999999999999999998877766665544 3433311
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
.++.+|++++|||.+||+.|+.+|++|.|||+||||+.
T Consensus 491 -----------------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 491 -----------------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -----------------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 34579999999999999999999999999999999953
No 33
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-50 Score=316.06 Aligned_cols=278 Identities=35% Similarity=0.644 Sum_probs=237.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.|...++||+|.||+||+|++..+++.||+|.+..+. ....+|+-+++.++|.|||+++++. ..+..+.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence 4777889999999999999999999999999986543 2345899999999999999999988 4455588
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|+|||..+|..++.. .++.++.+.++.++.|++.||.++|+ +++.||||||.|.|++. ++.+|++|||+++...
T Consensus 78 lvfe~cdqdlkkyfds---lng~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~-ngelkladfglarafg 152 (292)
T KOG0662|consen 78 LVFEFCDQDLKKYFDS---LNGDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINR-NGELKLADFGLARAFG 152 (292)
T ss_pred EeHHHhhHHHHHHHHh---cCCcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEecc-CCcEEecccchhhhcC
Confidence 9999999876655543 57889999999999999999999999 79999999999999997 8899999999999775
Q ss_pred cCCCc-ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 189 KGEAN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 189 ~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
-.-.. ...+.|.+|++|.++.+..-|+...|+||.|||+.|+.. |++.|++.+..+++.+|...+|.|..+.|+.+..
T Consensus 153 ipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~ 232 (292)
T KOG0662|consen 153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTK 232 (292)
T ss_pred CceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcccc
Confidence 44332 344569999999999998889999999999999999995 9999999999999999999999999999987764
Q ss_pred CCcCccCCCCCC-CCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 267 NYTDFRFPQIKA-HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 267 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
-.....+|.... ..|.++.| +++...+|+++++|.-+|.+|++++++++||||...
T Consensus 233 lpdyk~yp~ypattswsqivp-~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 233 LPDYKPYPIYPATTSWSQIVP-KLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred CCCCcccCCccccchHHHHhh-hhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 433333443332 34555444 578889999999999999999999999999999864
No 34
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-48 Score=354.06 Aligned_cols=276 Identities=37% Similarity=0.700 Sum_probs=221.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|.+.+.||+|+||.||+|++..+++.+|+|++.... ....+|+.+++.++||||+++++++ ..+..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 46999999999999999999999999999999986432 2234799999999999999999988 455668
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||++++++..+.. ....+++..++.++.|++.||.|||+ .|++||||||+||+++. ++.+||+|||++...
T Consensus 76 ~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~-~~~~kl~Dfg~~~~~ 150 (287)
T cd07848 76 YLVFEYVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISH-NDVLKLCDFGFARNL 150 (287)
T ss_pred EEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCcEEEeeccCcccc
Confidence 99999999887666543 24568999999999999999999999 79999999999999996 788999999999865
Q ss_pred ccCC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 188 VKGE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 188 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......+++.|+|||++.+.. ++.++|+||+||++|+|++|++||.+.+..+.+..+....+..+.+.+....
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 151 SEGSNANYTEYVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred cccccccccccccccccCCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 4322 223456899999999997654 8999999999999999999999999988888887777777776665554322
Q ss_pred cC--CcCccCCCCC-CCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 266 PN--YTDFRFPQIK-AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 266 ~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.. +.....+... ...+...+...+|.++.+||++||++||++|||++++|+||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 11 1111111111 1112223344578899999999999999999999999999998
No 35
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.3e-48 Score=354.50 Aligned_cols=280 Identities=34% Similarity=0.587 Sum_probs=222.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcC-CCcEEEEEEecccc------cchHHHHHHHHhC---CCCCeeecceeeeecCCCC
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDR------RYKNRELQLMRLM---DHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~------~~~~~e~~~l~~l---~h~~Iv~~~~~~~~~~~~~ 103 (376)
.+|++.+.||+|+||.||+|++.. +++.||+|.+.... ....+|+.+++.+ +||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 369999999999999999999864 46889999885432 1233577777665 6999999999885444345
Q ss_pred ceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 104 ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 104 ~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
...+++||||++++|.+.+... ....+++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~-~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKV--PEPGVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcC-CCCEEEccccc
Confidence 5668999999999888777643 23458999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+.............+++.|+|||.+.+. .++.++|+|||||++|+|++|.+||.+.+..+.+..+....+.+....+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 157 ARIYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred eEeccCCcccccccccccccChHHHhCC-CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence 9876554444556789999999999664 489999999999999999999999999999999999998888777665543
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
... .....+......+... +...+++.+++++.+||+.||++|||+.++|+||||
T Consensus 236 ~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 236 DVA-LPRQAFHSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhc-ccchhccCCCCCCHHH-HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 211 1111111111222222 223578999999999999999999999999999998
No 36
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-48 Score=363.71 Aligned_cols=287 Identities=32% Similarity=0.551 Sum_probs=225.4
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KD 103 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~ 103 (376)
...++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++..... ..
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34578999999999999999999999999999999986431 223468999999999999999998753322 12
Q ss_pred ceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 104 ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 104 ~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
...+|+||||+++++...+. ..+++..+..++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||+
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~-~~~~kl~Dfg~ 169 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGL 169 (359)
T ss_pred cceeEEEEeCCCcCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEEecCCC
Confidence 34578999999998776653 347889999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
++............+|+.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+.+..+.+..+....
T Consensus 170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 170 ARTACTNFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred ccccccCccCCCCcccCCCCCchhccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 9765444444556789999999999765 489999999999999999999999999988888888888888877654432
Q ss_pred cCcCCcCc--cCCCCCCCCcc-----------cccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 264 MNPNYTDF--RFPQIKAHPWH-----------KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 264 ~~~~~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.......+ ..+......+. .......++++++||.+||+.||++|||+.|+|+||||..+..+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 324 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP 324 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCc
Confidence 21110000 00000000000 11122357889999999999999999999999999999876554
No 37
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.4e-48 Score=362.85 Aligned_cols=288 Identities=32% Similarity=0.551 Sum_probs=228.9
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KD 103 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~ 103 (376)
...++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++..... ..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 45678999999999999999999999999999999986432 223468999999999999999988743321 23
Q ss_pred ceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 104 ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 104 ~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
...+|+||||+++++...+. ..+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~-~~~~kL~DfG~ 172 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGL 172 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECC-CCcEEEEeCCC
Confidence 34578999999998777664 247888999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
++............+++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+....++...+.+..+.+..
T Consensus 173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T cd07875 173 ARTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251 (364)
T ss_pred ccccCCCCcccCCcccCCcCCHHHHhCC-CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHh
Confidence 9876544444556789999999999765 489999999999999999999999999999999999999888887765544
Q ss_pred cCcCCcCc--cCCCCCC-----------CCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 264 MNPNYTDF--RFPQIKA-----------HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 264 ~~~~~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
.......+ ..+.... .++........+.++++||.+||+.||++|||++++|+||||..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~ 328 (364)
T cd07875 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS 328 (364)
T ss_pred hhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcc
Confidence 33221110 0000000 1111112223467899999999999999999999999999998765554
No 38
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.9e-48 Score=354.50 Aligned_cols=283 Identities=34% Similarity=0.648 Sum_probs=230.4
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
..++|.+.+.||+|+||.||+|++..+++.+|+|.+.... ....+|+.+++.++||||+++++++ ..+..
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 78 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV-----HTDKS 78 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEE-----eeCCe
Confidence 4567999999999999999999999999999999886432 2344799999999999999999988 44455
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+++||||+++++...+.. .+..+++..++.++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||++..
T Consensus 79 ~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~ 153 (309)
T cd07872 79 LTLVFEYLDKDLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINE-RGELKLADFGLARA 153 (309)
T ss_pred EEEEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEECcccccee
Confidence 899999999988776654 23568899999999999999999999 79999999999999996 77899999999875
Q ss_pred cccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
..... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+.+..+.+..+.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 154 KSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred cCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 43322 22344678999999998766668999999999999999999999999999888999999999988887765443
Q ss_pred cC--CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 266 PN--YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 266 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.. +..+.++.....++.. ....+++++++||.+||+.||.+|||++|+++||||+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 294 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLIN-HAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT 294 (309)
T ss_pred chhhhhhhhcCccCCCchhh-hccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence 21 1222233222222222 12357899999999999999999999999999999987653
No 39
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-48 Score=358.12 Aligned_cols=260 Identities=30% Similarity=0.498 Sum_probs=222.5
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCC-CCCeeecceeeeecC
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMD-HPNVISLKHCFFSTT 100 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~ 100 (376)
.....+.|.+.+.||.|.||.||+|+++.+|+.+|+|.+.+... ...+|+.+|+.+. ||||+.+++.|
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~---- 105 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF---- 105 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE----
Confidence 34456789999999999999999999999999999999965432 4568999999998 99999999999
Q ss_pred CCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC---CcE
Q 017139 101 SKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT---HQV 176 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~---~~~ 176 (376)
++...+++|||+|.| .|.+.+... .+++..+..++.|++.+++|||+ .|++||||||+|+|+.... +.+
T Consensus 106 -e~~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 106 -EDPDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred -EcCCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcE
Confidence 555579999999995 555555543 39999999999999999999999 7999999999999996432 479
Q ss_pred EEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 017139 177 KLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 256 (376)
Q Consensus 177 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 256 (376)
|++|||++............+||+.|+|||++... .|+..+|+||+|+++|.|++|.+||.+.+......++....-
T Consensus 179 k~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~-~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~-- 255 (382)
T KOG0032|consen 179 KLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGR-PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF-- 255 (382)
T ss_pred EEeeCCCceEccCCceEeeecCCccccCchhhcCC-CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--
Confidence 99999999988776667788999999999999654 599999999999999999999999999988877776665211
Q ss_pred CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 257 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.+....+..++..+++||++||..||.+|+|+.++|+|||++....
T Consensus 256 -----------------------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~ 301 (382)
T KOG0032|consen 256 -----------------------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGE 301 (382)
T ss_pred -----------------------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcc
Confidence 1122244568999999999999999999999999999999987633
No 40
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.9e-48 Score=362.77 Aligned_cols=283 Identities=33% Similarity=0.562 Sum_probs=224.8
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++..........+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999999999999999885431 2345799999999999999999988543322223689
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+||||+.++|...+.. ...+++..++.++.||+.||.|||+ +|++||||||+|||++. ++.+||+|||++....
T Consensus 81 lv~e~~~~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~-~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQSDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNS-NCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccccCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECC-CCCEEeccccceeecc
Confidence 9999999887766643 4679999999999999999999999 79999999999999996 7889999999987654
Q ss_pred cCC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 189 KGE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 189 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
... ......+++.|+|||.+.+...++.++||||+||++|+|++|+.||.+.+..+.+..+.+.+|.+..+.+.....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~ 234 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE 234 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence 322 123346789999999997766689999999999999999999999999999999999999999888766543221
Q ss_pred CCcCccCCCCCCC-Cc--ccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 267 NYTDFRFPQIKAH-PW--HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 267 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
............. .+ ...+....++++.+||.+||++||.+|||+.++|+||||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 1100000000000 00 001234568899999999999999999999999999999874
No 41
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-50 Score=337.53 Aligned_cols=260 Identities=30% Similarity=0.471 Sum_probs=221.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------------cchHHHHHHHHhC-CCCCeeecceeeeecC
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------RYKNRELQLMRLM-DHPNVISLKHCFFSTT 100 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~ 100 (376)
..|.-.+.||.|..+.|-++.++.+|..+|+|++.... ....+|+.+|+++ .||+|+++.++|
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y---- 92 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY---- 92 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec----
Confidence 45777889999999999999999999999999884321 1123689999987 699999999999
Q ss_pred CCCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEE
Q 017139 101 SKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLC 179 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~ 179 (376)
+.+.++++|+|.|+ |.|.+++. ..-.+++...+.|+.|++.|++|||. ++||||||||+|||++. +.++||+
T Consensus 93 -es~sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa-~~IVHRDLKpENILldd-n~~i~is 165 (411)
T KOG0599|consen 93 -ESDAFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDD-NMNIKIS 165 (411)
T ss_pred -cCcchhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHH-hhhhhcccChhheeecc-ccceEEe
Confidence 88888999999999 56555554 45779999999999999999999999 79999999999999995 8889999
Q ss_pred ecCCccccccCCCcceeeccccccChhhhhC-----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Q 017139 180 DFGSAKVLVKGEANISYICSRYYRAPELIFG-----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 254 (376)
Q Consensus 180 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~ 254 (376)
|||++.....+......+|||.|+|||.+.. .+.|+..+|+|++|+|+|.|+.|.+||........+..|++..-
T Consensus 166 DFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky 245 (411)
T KOG0599|consen 166 DFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY 245 (411)
T ss_pred ccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc
Confidence 9999999988888889999999999999854 34588999999999999999999999988877777777766322
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCC
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 329 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~ 329 (376)
.... .-+.++|...+|||.+||++||.+|+|++|+|+||||..+-....+
T Consensus 246 qF~s-------------------------peWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r 295 (411)
T KOG0599|consen 246 QFRS-------------------------PEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQAR 295 (411)
T ss_pred ccCC-------------------------cchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhccc
Confidence 2111 1234689999999999999999999999999999999877655444
No 42
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7.9e-48 Score=359.23 Aligned_cols=287 Identities=32% Similarity=0.563 Sum_probs=228.2
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KD 103 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~ 103 (376)
...++|.+.+.||+|+||.||+|.+..+++.+|+|++.... ....+|+.+++.++||||+++++++..... ..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999999999999999986432 223468999999999999999998754322 22
Q ss_pred ceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 104 ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 104 ~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
...+|+||||+++++...+. ..+++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~-~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhcccHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECC-CCCEEEeeCcc
Confidence 34578999999998776654 248889999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
++............+|+.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+++.++.+..+.+..
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 9876554444566789999999999765 489999999999999999999999999998888888888888887765544
Q ss_pred cCcCCc----------CccCCCCCC---CCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 264 MNPNYT----------DFRFPQIKA---HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 264 ~~~~~~----------~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
..+... ...++.... .+.........+.++++||.+||..||++|||+.|+|+||||..+..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~ 320 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP 320 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence 332211 111111000 011111223456789999999999999999999999999999876544
No 43
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-47 Score=347.84 Aligned_cols=279 Identities=30% Similarity=0.545 Sum_probs=221.9
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhC---CCCCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLM---DHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l---~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5999999999999999999999999999999886431 1233577777665 799999999988654444566
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.++++|||++++|...+.... ...+++..++.++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~-~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTS-GGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccccCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEECccCccc
Confidence 789999999998877776432 3458999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
............++..|+|||++.+. .++.++|+||+||++|+|++|.+||.+....+.+..+....+.+....+....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 157 IYSCQMALTPVVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred cccCcccCCCccccccccCchHhhCC-CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence 76544444456779999999999765 48999999999999999999999999988888888888887777655543211
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.. ....+......++.. ....++.++.++|.+||++||++|||+.+++.||||
T Consensus 236 ~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 236 TL-PRGAFSPRGPRPVQS-VVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cc-cccccCCCCCCchHH-hCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 000111111111111 223578899999999999999999999999999998
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.1e-48 Score=353.19 Aligned_cols=250 Identities=28% Similarity=0.416 Sum_probs=210.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 47999999999999999999999999999999985421 2345699999999999999999887 55567
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+++ +|.+.+.. ...+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~-~~~~kl~Dfg~~~ 149 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDK-EGHIKLTDFGFAK 149 (291)
T ss_pred EEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECC-CCCEEEEecCcch
Confidence 9999999985 66666553 4578999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
..... .....|++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~------------ 214 (291)
T cd05612 150 KLRDR--TWTLCGTPEYLAPEVIQSK-GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK------------ 214 (291)
T ss_pred hccCC--cccccCChhhcCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------
Confidence 65432 2345689999999998765 48999999999999999999999999887766665554310
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
..++..+++.+++||++||+.||.+|++ ++++++||||+.+++.
T Consensus 215 -----------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 215 -----------------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred -----------------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 0133456889999999999999999995 9999999999987664
No 45
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.2e-47 Score=348.20 Aligned_cols=285 Identities=32% Similarity=0.612 Sum_probs=230.5
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
...++|++.+.||.|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ ....
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~ 77 (301)
T cd07873 3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEK 77 (301)
T ss_pred ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCC
Confidence 35678999999999999999999999999999999885432 2344799999999999999999998 4455
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|+||||++++|...+... ...+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||++.
T Consensus 78 ~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~ 152 (301)
T cd07873 78 SLTLVFEYLDKDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINE-RGELKLADFGLAR 152 (301)
T ss_pred eEEEEEeccccCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECC-CCcEEECcCcchh
Confidence 68999999999887776542 4568899999999999999999999 79999999999999996 7789999999987
Q ss_pred ccccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...... ......+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+....+...++.+....+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 153 AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred ccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence 643322 2223456889999999876666889999999999999999999999999888888888888888777666543
Q ss_pred Cc--CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 265 NP--NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.. .+..+.++....... ......+++++++||.+||+.||.+|||++++++||||+.+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCL-HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred hccccccccccCccccccH-HhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 21 122222232221111 12334678999999999999999999999999999999887644
No 46
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5e-48 Score=356.64 Aligned_cols=253 Identities=28% Similarity=0.432 Sum_probs=211.1
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
...++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .+
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~ 89 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QD 89 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ec
Confidence 34578999999999999999999999999999999986432 2245799999999999999999988 45
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
+..+|+|||||.| +|.+.+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~-~~~~kl~Dfg 163 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDN-KGHVKVTDFG 163 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECC-CCCEEEeecc
Confidence 5568999999986 66555543 4678999999999999999999999 79999999999999996 7889999999
Q ss_pred CccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 183 SAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
++...... .....|++.|+|||++.+.. ++.++|+|||||++|+|++|..||.+.+.......+... .
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~------- 231 (329)
T PTZ00263 164 FAKKVPDR--TFTLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--R------- 231 (329)
T ss_pred CceEcCCC--cceecCChhhcCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--C-------
Confidence 99765332 23467899999999997654 799999999999999999999999887766555544331 0
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
. .++..++..+++||.+||+.||.+|++ ++++++||||++..+.
T Consensus 232 --------~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 232 --------L------------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred --------c------------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 0 123347889999999999999999997 7999999999886554
No 47
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.5e-49 Score=345.31 Aligned_cols=249 Identities=26% Similarity=0.454 Sum_probs=221.0
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.-.+|++.+.||+|.||+|-+|.....|+.||||.+.++.. .+.+|++++..|+||||+.++++| ++.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----ENk 125 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----ENK 125 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cCC
Confidence 34689999999999999999999999999999999876542 345899999999999999999999 666
Q ss_pred eeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+.|||||.. |.|++++.. .+.+++.+.++++.||.+|+.|||. ++++|||||.+|||+|. ++++||+|||+
T Consensus 126 dKIvivMEYaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCHk-nrVvHRDLKLENILLD~-N~NiKIADFGL 199 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYCHK-NRVVHRDLKLENILLDQ-NNNIKIADFGL 199 (668)
T ss_pred ceEEEEEEecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHhh-ccceecccchhheeecC-CCCeeeeccch
Confidence 66899999998 577777765 5789999999999999999999999 89999999999999997 77899999999
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+..+.......+++|+|.|.+||++.+.++-++.+|.||||++||.|+.|..||.+.+....+.+|...
T Consensus 200 SNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G----------- 268 (668)
T KOG0611|consen 200 SNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG----------- 268 (668)
T ss_pred hhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc-----------
Confidence 999888888889999999999999998887799999999999999999999999999988877776552
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
.|+- ..-+.++.-||+.||-+||++|.|++++-+|=|++
T Consensus 269 ------aYrE-------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 269 ------AYRE-------------PETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ------cccC-------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 1111 13477899999999999999999999999996664
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.8e-49 Score=322.56 Aligned_cols=252 Identities=29% Similarity=0.464 Sum_probs=221.0
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
..++|++++.||.|-||.||+|+.+.++..||+|++.+.. ....+|+++...|+||||++++++| -+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f-----hd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF-----HDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----ecc
Confidence 4578999999999999999999999999999999986543 3445799999999999999999999 555
Q ss_pred eeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+|+++||.+ |.++..|... ...++++...+.++.|++.||.|||. ++++||||||+|+|++. .+.+||+|||.
T Consensus 95 ~riyLilEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~-~~~lkiAdfGw 170 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGS-AGELKIADFGW 170 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCC-CCCeeccCCCc
Confidence 66999999998 6777777642 35679999999999999999999999 89999999999999997 88899999999
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+.... .....+.+||.-|.+||...+.. ++..+|+|++|++.||++.|.+||.+....+.+++|.+.
T Consensus 171 sV~~p-~~kR~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~----------- 237 (281)
T KOG0580|consen 171 SVHAP-SNKRKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV----------- 237 (281)
T ss_pred eeecC-CCCceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc-----------
Confidence 87654 55667889999999999997654 899999999999999999999999999888888888773
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
++. +|..++.++.|+|.+||.++|.+|.+..|++.|||+...
T Consensus 238 ------~~~------------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 238 ------DLK------------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred ------ccc------------CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 122 446789999999999999999999999999999998753
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.5e-48 Score=356.10 Aligned_cols=246 Identities=27% Similarity=0.441 Sum_probs=203.9
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.||+|+||.||+|++..+|+.||+|++.... ....+|+.+++.++||||+++++++ .....+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 47999999999999999999999999986432 1234688999999999999999888 45556899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-C
Q 017139 113 YVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-G 190 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~-~ 190 (376)
|+++ +|...+.. +..+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+++.... .
T Consensus 76 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~~~~~~ 149 (323)
T cd05571 76 YANGGELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDK-DGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECC-CCCEEEeeCCCCcccccCC
Confidence 9996 55555443 4678999999999999999999999 79999999999999996 77899999999875432 2
Q ss_pred CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 191 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 191 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
.......||+.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+.......+... .
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~-----------------~ 211 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------------E 211 (323)
T ss_pred CcccceecCccccChhhhcCC-CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC-----------------C
Confidence 233456789999999999764 4899999999999999999999999887765555443321 0
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
..++..+++++.+||.+||+.||++|| ++.++++||||+.+.+.
T Consensus 212 ------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~ 260 (323)
T cd05571 212 ------------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQ 260 (323)
T ss_pred ------------CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 013456799999999999999999999 89999999999987664
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.4e-47 Score=346.85 Aligned_cols=257 Identities=24% Similarity=0.380 Sum_probs=208.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.|++.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++.+++ .++..+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 3889999999999999999999999999999885432 1234689999999999999999888 445568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++|||||++ +|...+... ....+++..+..++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++..
T Consensus 76 ~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDD-RGHIRISDLGLAVQ 151 (285)
T ss_pred EEEEEecCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECC-CCCEEEeeCCCcEE
Confidence 999999986 555444331 23468999999999999999999999 79999999999999996 77899999999987
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
...........|++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+.......+.......
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---------- 220 (285)
T cd05631 152 IPEGETVRGRVGTVGYMAPEVINNE-KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKED---------- 220 (285)
T ss_pred cCCCCeecCCCCCCCccCHhhhcCC-CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcc----------
Confidence 5444444456789999999999765 48999999999999999999999998765433332222211100
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
...++..+++++.+||++||+.||.+|++ ++++++||||..+++.
T Consensus 221 ---------------~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05631 221 ---------------QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFK 270 (285)
T ss_pred ---------------cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHH
Confidence 01134467999999999999999999997 8999999999988765
No 51
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.1e-47 Score=353.62 Aligned_cols=285 Identities=35% Similarity=0.623 Sum_probs=227.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CCce
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KDEL 105 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~~~ 105 (376)
.++|.+.+.||.|+||+||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 468999999999999999999999999999999986432 223469999999999999999988743221 2234
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|+++++++++|...+. ...+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.+||+|||++.
T Consensus 94 ~~~~~~~~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~ 166 (343)
T cd07878 94 EVYLVTNLMGADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNE-DCELRILDFGLAR 166 (343)
T ss_pred cEEEEeecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECC-CCCEEEcCCccce
Confidence 578999999888766654 2569999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......+++.|+|||++.+...++.++|||||||++|+|++|..||.+.+..+.+..+....+.+..+.+....
T Consensus 167 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 167 QADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred ecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 6543 23355789999999999775568999999999999999999999999988888888888888887766554332
Q ss_pred cCCcCc---cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 266 PNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 266 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
...... ..+......+... ....++.+.+||.+||..||.+|||+.++|+||||.....+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~ 308 (343)
T cd07878 245 SEHARKYIQSLPHMPQQDLKKI-FRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPE 308 (343)
T ss_pred hhhHHHHhhccccccchhHHHh-ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCc
Confidence 211110 1111111111111 234678899999999999999999999999999999876553
No 52
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-48 Score=351.22 Aligned_cols=263 Identities=27% Similarity=0.407 Sum_probs=233.2
Q ss_pred CCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecC
Q 017139 27 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTT 100 (376)
Q Consensus 27 ~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~ 100 (376)
....+..+-|.+.+.||+|-|+.|-+|++..+|+.||||++.+.. ..+.+|+..++.++|||||++|++.
T Consensus 11 i~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi---- 86 (864)
T KOG4717|consen 11 IYDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI---- 86 (864)
T ss_pred ccccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh----
Confidence 344455667999999999999999999999999999999997653 2334799999999999999999998
Q ss_pred CCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEE
Q 017139 101 SKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLC 179 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~ 179 (376)
.....+|+|+|.-++ +|.+++... ...+.|...++++.||+.|+.|||++ ++|||||||+|+.+-..-|-+||+
T Consensus 87 -DTQTKlyLiLELGD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLT 161 (864)
T KOG4717|consen 87 -DTQTKLYLILELGDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLT 161 (864)
T ss_pred -cccceEEEEEEecCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEee
Confidence 555569999999885 888888763 46799999999999999999999995 899999999998876667889999
Q ss_pred ecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 180 DFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 180 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
|||++..+.++....+.+|+..|.|||++++..+..+++||||||||||.|++|++||...++.+.+..|+.+-
T Consensus 162 DFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK------ 235 (864)
T KOG4717|consen 162 DFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK------ 235 (864)
T ss_pred eccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc------
Confidence 99999999999999999999999999999998877889999999999999999999999999999998888742
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
|. .|..++.+++|||..||..||.+|.+.+++..|+|++.++.+.
T Consensus 236 -----------Yt------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~ 280 (864)
T KOG4717|consen 236 -----------YT------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGL 280 (864)
T ss_pred -----------cc------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCc
Confidence 22 4467899999999999999999999999999999999987664
No 53
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-49 Score=336.88 Aligned_cols=256 Identities=29% Similarity=0.431 Sum_probs=219.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchH-------HHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
-.++|..+++||+|.||+|-+|+.+.+++.||||+++++....+ .|-.+|+..+||++..+...| +..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccC
Confidence 34789999999999999999999999999999999987654443 467899999999999998888 666
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+|+||||.+|+ .+....+....+++...+.+-.+|++||.|||+ ++||+||||.+|.|+|+ +|.+||+|||+|
T Consensus 241 drlCFVMeyanGG---eLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDk-DGHIKitDFGLC 315 (516)
T KOG0690|consen 241 DRLCFVMEYANGG---ELFFHLSRERVFSEDRTRFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDK-DGHIKITDFGLC 315 (516)
T ss_pred ceEEEEEEEccCc---eEeeehhhhhcccchhhhhhhHHHHHHhhhhhh-CCeeeeechhhhheecc-CCceEeeecccc
Confidence 6799999999975 222223346789999999999999999999999 89999999999999997 888999999999
Q ss_pred ccccc-CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 185 KVLVK-GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 185 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+..-. .....+.+|||.|+|||++... .|+.++|+|.+||++|||++|+.||...+.......|+..
T Consensus 316 KE~I~~g~t~kTFCGTPEYLAPEVleDn-DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e----------- 383 (516)
T KOG0690|consen 316 KEEIKYGDTTKTFCGTPEYLAPEVLEDN-DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME----------- 383 (516)
T ss_pred hhcccccceeccccCChhhcCchhhccc-cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-----------
Confidence 86544 3445678999999999999654 5999999999999999999999999998887776666542
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCCC
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPN 327 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~~ 327 (376)
++ .||..++++++.|+..+|.+||.+|.. +.|+.+|+||..++|..
T Consensus 384 ------d~------------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~ 434 (516)
T KOG0690|consen 384 ------DL------------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEA 434 (516)
T ss_pred ------hc------------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHH
Confidence 11 156789999999999999999999984 78999999999999874
No 54
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-47 Score=360.19 Aligned_cols=278 Identities=23% Similarity=0.349 Sum_probs=213.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
..+|.+.+.||+|+||.||+|.+..+++.||+|.... ....+|+++++.++||||+++++++ ......++|+|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--GGTATEAHILRAINHPSIIQLKGTF-----TYNKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--hhhHHHHHHHHhCCCCCCCCEeEEE-----EECCeeEEEEe
Confidence 3579999999999999999999999999999997643 2356799999999999999999988 34455889999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC--
Q 017139 113 YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-- 190 (376)
Q Consensus 113 ~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~-- 190 (376)
++.++|...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 164 ~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~-~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 164 RYKTDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINH-PGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcC-CCCEEEEeCCcccccccccc
Confidence 999887776654 3568999999999999999999999 79999999999999996 778999999998754322
Q ss_pred CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHhcCCCCHHHHhh
Q 017139 191 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE-------NAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 191 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
.......||+.|+|||++.+. .++.++|||||||++|+|++|..||... +....+..++...|.++.+....
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARD-PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred cccccccCccCCCChhhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 222345789999999999764 4899999999999999999999887543 23456677777777654321100
Q ss_pred cCcC----C----cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 264 MNPN----Y----TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 264 ~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.... + ............|... ..++.++.+||.+||++||.+|||++|+|+||||+.+..+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNL--YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHH--hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 0000 0 0000000000111111 1357789999999999999999999999999999876443
No 55
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.6e-47 Score=355.67 Aligned_cols=256 Identities=28% Similarity=0.418 Sum_probs=207.0
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||+||+|.+..+++.||+|++.+.. ....+|+.+++.++||||+++++.+ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47999999999999999999999999999999986432 2334688999999999999999988 55566
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+|||||+| +|.+.+.. ...+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||+++
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~-~~~vkL~DFGla~ 149 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDS-KGHVKLSDFGLCT 149 (363)
T ss_pred EEEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECC-CCCEEEeeccCcc
Confidence 9999999986 56555543 4679999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCC------------------------------------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHH
Q 017139 186 VLVKGE------------------------------------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAE 229 (376)
Q Consensus 186 ~~~~~~------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 229 (376)
...... .....+||+.|+|||++.+. .++.++|+|||||++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~~~~~DvwSlGvil~e 228 (363)
T cd05628 150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYE 228 (363)
T ss_pred cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC-CCCCchhhhhhHHHHHH
Confidence 542210 01235789999999999765 48999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCC---
Q 017139 230 LLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS--- 306 (376)
Q Consensus 230 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~--- 306 (376)
|++|..||.+.+..+....+...... ..+|. ...++++++++|.+|+. +|.
T Consensus 229 ll~G~~Pf~~~~~~~~~~~i~~~~~~---------------~~~p~----------~~~~s~~~~~li~~l~~-~~~~r~ 282 (363)
T cd05628 229 MLIGYPPFCSETPQETYKKVMNWKET---------------LIFPP----------EVPISEKAKDLILRFCC-EWEHRI 282 (363)
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCcCc---------------ccCCC----------cCCCCHHHHHHHHHHcC-ChhhcC
Confidence 99999999988877766665542110 00110 01368899999999876 444
Q ss_pred CCCCHHHHhCCCccccccCCC
Q 017139 307 LRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 307 ~R~t~~ell~hp~~~~~~~~~ 327 (376)
.||+++|+++||||+.+++..
T Consensus 283 ~r~~~~ei~~hp~f~~~~~~~ 303 (363)
T cd05628 283 GAPGVEEIKTNPFFEGVDWEH 303 (363)
T ss_pred CCCCHHHHhCCCCCCCCCHHH
Confidence 458999999999999987754
No 56
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=8.5e-47 Score=346.93 Aligned_cols=278 Identities=32% Similarity=0.561 Sum_probs=211.2
Q ss_pred eeeeccCCceEEEEEEEc--CCCcEEEEEEecccc--cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 39 ERVVGTGSFGIVFQAKCL--ETGETVAIKKVLQDR--RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
+++||+|+||.||+|++. .+++.||+|.+.... ....+|+.+++.++||||+++++++.. ..+..+|++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEecc
Confidence 468999999999999975 467899999986543 234579999999999999999998754 3345688999999
Q ss_pred cchHHHHHHhhhh-----cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec---CCCCcEEEEecCCccc
Q 017139 115 PETMYRVLKHYSS-----MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD---PLTHQVKLCDFGSAKV 186 (376)
Q Consensus 115 ~g~l~~~l~~~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~---~~~~~~kl~Dfg~~~~ 186 (376)
++++...+..... ....+++..++.++.||+.||+|||+ +||+||||||+|||++ ..++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 9988877754321 12358999999999999999999999 7999999999999994 2356899999999976
Q ss_pred cccCC----CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhc
Q 017139 187 LVKGE----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA---------VDQLVEIIKVL 253 (376)
Q Consensus 187 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~---------~~~~~~~~~~~ 253 (376)
..... ......+|+.|+|||++.+...++.++|+||+||++|+|++|.+||..... ...+..+...+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 54322 123456799999999997766689999999999999999999999975432 35677788888
Q ss_pred CCCCHHHHhhcCcCCc------Cc---cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 254 GTPTREEIRCMNPNYT------DF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
|.+....+.....-.. .+ .........+........+.++.+||.+||++||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 8877766554321100 00 0000000000011112346679999999999999999999999999998
No 57
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.6e-48 Score=332.17 Aligned_cols=289 Identities=35% Similarity=0.602 Sum_probs=231.5
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCc----EEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTT 100 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~ 100 (376)
.....|++.+.||+|.||.||+|....++. .+|||++.... ...-+|+.+++.++|||++.+..+|+.
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~-- 98 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS-- 98 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc--
Confidence 445689999999999999999997665533 69999996552 234589999999999999999999864
Q ss_pred CCCceeEEEEeecccchHHHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCC---CCcE
Q 017139 101 SKDELFLNLVMEYVPETMYRVLKHYSS-MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL---THQV 176 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g~l~~~l~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~---~~~~ 176 (376)
.+..+++++||.+-+|++.++.... ....++...++.|+.||+.|+.|||+ +-|+||||||.|||+..+ .|+|
T Consensus 99 --~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 99 --HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred --cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccCee
Confidence 2556999999999999999976543 34678999999999999999999999 899999999999999752 3899
Q ss_pred EEEecCCccccccCCC----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCC---------ChH
Q 017139 177 KLCDFGSAKVLVKGEA----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE---------NAV 243 (376)
Q Consensus 177 kl~Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~---------~~~ 243 (376)
||+|||+++...+.-. ....+.|.||+|||++++...|+++.|+|++|||+.||++-.+.|.+. -..
T Consensus 176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~ 255 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQH 255 (438)
T ss_pred EeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchH
Confidence 9999999998765432 234566999999999999999999999999999999999999999754 245
Q ss_pred HHHHHHHHhcCCCCHHHHhhcCcCCcCc--cCCCCC-----CCCccccc--ccCCChhHHHHHHhhcCCCCCCCCCHHHH
Q 017139 244 DQLVEIIKVLGTPTREEIRCMNPNYTDF--RFPQIK-----AHPWHKVF--HKRMPPEAIDLASRLLQYSPSLRCTALEA 314 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~t~~el 314 (376)
+++.+|++.+|.|....|+.+..- .++ ....+. ...++..+ .+.-++.+.+|+.+||++||-+|+|++++
T Consensus 256 dQl~rIf~vLG~Pt~~~Wp~lkk~-Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA 334 (438)
T KOG0666|consen 256 DQLDRIFEVLGTPTDKDWPDLKKM-PEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA 334 (438)
T ss_pred HHHHHHHHHcCCCccccchhhhhC-cchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH
Confidence 889999999999999888755321 111 011111 11111111 12345669999999999999999999999
Q ss_pred hCCCccccccC
Q 017139 315 CAHPFFDELRE 325 (376)
Q Consensus 315 l~hp~~~~~~~ 325 (376)
|+|+||+.-..
T Consensus 335 leh~yF~~d~l 345 (438)
T KOG0666|consen 335 LEHPYFTEDPL 345 (438)
T ss_pred hcccccccCCC
Confidence 99999987433
No 58
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.2e-47 Score=353.27 Aligned_cols=252 Identities=29% Similarity=0.448 Sum_probs=209.8
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCC-cEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~-~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
..++|.+.+.||+|+||.||+|.+..++ ..||+|.+.... ....+|+.+++.++||||+++++++ .+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~ 102 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----KD 102 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----Ee
Confidence 4578999999999999999999876655 689999885431 2234699999999999999999998 44
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
...+|+|||||.+ +|.+.+.. +..+++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~-~~~ikL~DFG 176 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDK-DGFIKMTDFG 176 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECC-CCCEEEecCC
Confidence 5568999999985 66666543 4679999999999999999999999 79999999999999986 7889999999
Q ss_pred CccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 183 SAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
++..... ......||+.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+.......+....
T Consensus 177 ~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~--------- 244 (340)
T PTZ00426 177 FAKVVDT--RTYTLCGTPEYIAPEILLNV-GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI--------- 244 (340)
T ss_pred CCeecCC--CcceecCChhhcCHHHHhCC-CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC---------
Confidence 9976532 23456789999999999764 48999999999999999999999999887766555554311
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
..++..+++++.++|++||+.||.+|+ +++++++||||+++.+.
T Consensus 245 --------------------~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~ 293 (340)
T PTZ00426 245 --------------------IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV 293 (340)
T ss_pred --------------------CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 013345788999999999999999996 89999999999987654
No 59
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.4e-46 Score=340.07 Aligned_cols=276 Identities=35% Similarity=0.574 Sum_probs=219.0
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||.|+||.||+|.+..+|+.+|+|.+.... ....+|+.+++.++||||+++++++ .+...++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 5899999999999999999999999999999885431 2345799999999999999999988 4455689
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+++||++++|...+.. ....+++..++.++.||+.||.|||+ +|++|+||||+||+++. ++.+||+|||++....
T Consensus 76 lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~~~ 150 (284)
T cd07839 76 LVFEYCDQDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINK-NGELKLADFGLARAFG 150 (284)
T ss_pred EEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcC-CCcEEECccchhhccC
Confidence 9999999988776654 24569999999999999999999999 79999999999999996 7889999999987653
Q ss_pred cCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 189 KGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL-FPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 189 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
... ......++..|+|||.+.+...++.++|+|||||++|+|++|..| |.+.+..+.+..+.+..+.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 151 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred CCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhh
Confidence 322 122345688999999987766679999999999999999998877 566666777777887777776665543322
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
......++..............+++++.++|.+||+.||.+|||+++++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 111111111111111122334688999999999999999999999999999998
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.4e-47 Score=351.13 Aligned_cols=258 Identities=30% Similarity=0.466 Sum_probs=211.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||+|++..+++.||+|++.... .....|+++++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCE
Confidence 36999999999999999999999999999999986432 2234688999999999999999888 55556
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+|||||+| +|.+.+.. ...+++..++.++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~a~ 149 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDA-SGHIKLTDFGLSK 149 (333)
T ss_pred EEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECC-CCCEEEEeCcCCc
Confidence 8999999985 66666643 4578999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......|++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+........
T Consensus 150 ~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------- 218 (333)
T cd05600 150 GIVT--YANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ-------- 218 (333)
T ss_pred cccc--ccCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc--------
Confidence 6543 33456789999999999765 589999999999999999999999998877666655443211000
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.+.. ......++.++.++|.+||..+|++|++++++++||||+...+.
T Consensus 219 -------~~~~------~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~~ 266 (333)
T cd05600 219 -------RPVY------DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWN 266 (333)
T ss_pred -------CCCC------CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCHH
Confidence 0000 00012468999999999999999999999999999999987654
No 61
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-48 Score=327.98 Aligned_cols=264 Identities=28% Similarity=0.426 Sum_probs=213.0
Q ss_pred ccccceEee-eeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEE
Q 017139 31 KQTISYMAE-RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 31 ~~~~~y~~~-~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
..+++|.+. ++||-|-.|+|..|.++.+++.+|+|++.. .....+|+++--.. .|||||.++++|.... .+...+.
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-s~KARrEVeLHw~~s~h~~iV~IidVyeNs~-~~rkcLL 135 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-SPKARREVELHWMASGHPHIVSIIDVYENSY-QGRKCLL 135 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-CHHHHhHhhhhhhhcCCCceEEeehhhhhhc-cCceeeE
Confidence 467899885 689999999999999999999999997744 44556788875544 6999999999985443 4566788
Q ss_pred EEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC--CCCcEEEEecCCcc
Q 017139 109 LVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP--LTHQVKLCDFGSAK 185 (376)
Q Consensus 109 lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~--~~~~~kl~Dfg~~~ 185 (376)
+|||+++|+ |.+-+... ..+.++|.++..|+.||+.|+.|||+ .+|.||||||+|+|... .+..+||+|||+|+
T Consensus 136 iVmE~meGGeLfsriq~~--g~~afTErea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDR--GDQAFTEREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeeecccchHHHHHHHHc--ccccchHHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEeccccccc
Confidence 999999975 44434332 34669999999999999999999999 59999999999999953 34579999999999
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHHhcCCCCHHHH
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV----DQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~ 261 (376)
.........+.+.||+|.|||++ +...|+..+|+||+||++|-|++|.+||++.... ....+|...
T Consensus 213 ~t~~~~~L~TPc~TPyYvaPevl-g~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g--------- 282 (400)
T KOG0604|consen 213 ETQEPGDLMTPCFTPYYVAPEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG--------- 282 (400)
T ss_pred ccCCCccccCCcccccccCHHHh-CchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc---------
Confidence 88777777788889999999998 5556999999999999999999999999876532 222223221
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.|.||. .-+..+|++++|+|+++|..+|++|.|++++++|||+.....
T Consensus 283 --------qy~FP~--------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~ 330 (400)
T KOG0604|consen 283 --------QYEFPE--------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA 330 (400)
T ss_pred --------CccCCC--------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence 122221 123458999999999999999999999999999999987543
No 62
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.9e-47 Score=355.83 Aligned_cols=255 Identities=31% Similarity=0.504 Sum_probs=207.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+|+.+++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 46999999999999999999999999999999986431 2234699999999999999999988 55566
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+|||||+| +|.+.+.. ...+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~ 149 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDA-KGHIKLSDFGLCT 149 (364)
T ss_pred EEEEECCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECC-CCCEEEeecccce
Confidence 9999999985 55555543 4569999999999999999999999 79999999999999996 7889999999986
Q ss_pred ccccCC---------------------------------------CcceeeccccccChhhhhCCCCCCccchhHHHHHH
Q 017139 186 VLVKGE---------------------------------------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCV 226 (376)
Q Consensus 186 ~~~~~~---------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 226 (376)
...... .....+||+.|+|||++.+. .++.++|+|||||+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~i 228 (364)
T cd05599 150 GLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT-GYNKECDWWSLGVI 228 (364)
T ss_pred eccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC-CCCCeeeeecchhH
Confidence 542211 01124689999999998654 48999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCC
Q 017139 227 LAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 306 (376)
Q Consensus 227 l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 306 (376)
+|+|++|..||.+.+..+....+..... ...++. ...+++++++||.+||. +|.
T Consensus 229 l~el~~G~~Pf~~~~~~~~~~~i~~~~~---------------~~~~~~----------~~~~s~~~~~li~~ll~-~p~ 282 (364)
T cd05599 229 MYEMLVGYPPFCSDNPQETYRKIINWKE---------------TLQFPD----------EVPLSPEAKDLIKRLCC-EAE 282 (364)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHcCCC---------------ccCCCC----------CCCCCHHHHHHHHHHcc-CHh
Confidence 9999999999998877666555543110 001110 11468999999999997 999
Q ss_pred CCCC---HHHHhCCCccccccCC
Q 017139 307 LRCT---ALEACAHPFFDELREP 326 (376)
Q Consensus 307 ~R~t---~~ell~hp~~~~~~~~ 326 (376)
+|++ ++++++||||+..++.
T Consensus 283 ~R~~~~~~~~ll~h~~~~~~~~~ 305 (364)
T cd05599 283 RRLGNNGVNEIKSHPFFKGVDWE 305 (364)
T ss_pred hcCCCCCHHHHhcCCCcCCCCHH
Confidence 9998 9999999999987664
No 63
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.9e-47 Score=356.60 Aligned_cols=255 Identities=30% Similarity=0.482 Sum_probs=205.1
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||+|.+..+++.||||++.+.. ....+|+++++.++||||+++++++ .+..+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 47999999999999999999999999999999985432 2234689999999999999999988 55667
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+|||||+| +|...+.. ...+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||+++
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~-~~~~kl~DfGla~ 149 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDR-GGHIKLSDFGLST 149 (377)
T ss_pred eEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECC-CCCEEEeeccccc
Confidence 9999999985 66666553 4678999999999999999999999 79999999999999996 7889999999985
Q ss_pred ccccCC------------------------------------------------CcceeeccccccChhhhhCCCCCCcc
Q 017139 186 VLVKGE------------------------------------------------ANISYICSRYYRAPELIFGATEYTTS 217 (376)
Q Consensus 186 ~~~~~~------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 217 (376)
...... .....+||+.|+|||++.+. .++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~ 228 (377)
T cd05629 150 GFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ-GYGQE 228 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC-CCCCc
Confidence 321100 00124689999999999765 48999
Q ss_pred chhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHH
Q 017139 218 IDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLA 297 (376)
Q Consensus 218 ~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 297 (376)
+|+|||||++|+|++|.+||.+.+..+....+..... ...+|. ...++.++++||
T Consensus 229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~----------~~~~s~~~~dli 283 (377)
T cd05629 229 CDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRE---------------TLYFPD----------DIHLSVEAEDLI 283 (377)
T ss_pred eeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCC---------------ccCCCC----------CCCCCHHHHHHH
Confidence 9999999999999999999988877666655543110 001110 124688999999
Q ss_pred HhhcCCCCCCC---CCHHHHhCCCccccccCC
Q 017139 298 SRLLQYSPSLR---CTALEACAHPFFDELREP 326 (376)
Q Consensus 298 ~~~L~~dP~~R---~t~~ell~hp~~~~~~~~ 326 (376)
.+||+ +|.+| +++.++++||||+..++.
T Consensus 284 ~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~ 314 (377)
T cd05629 284 RRLIT-NAENRLGRGGAHEIKSHPFFRGVDWD 314 (377)
T ss_pred HHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHH
Confidence 99998 67665 599999999999987654
No 64
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.4e-46 Score=344.31 Aligned_cols=320 Identities=34% Similarity=0.625 Sum_probs=241.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
..++|.+.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++||||+++++++..........
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3468999999999999999999999999999999885321 12346899999999999999998875444344556
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+|+++||+++++...+.. ..+++..++.++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~ 155 (336)
T cd07849 83 VYIVQELMETDLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNT-NCDLKICDFGLARI 155 (336)
T ss_pred EEEEehhcccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECC-CCCEEECcccceee
Confidence 899999999987766643 569999999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCCC----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 187 LVKGEA----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 187 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
...... .....+++.|+|||.+.+...++.++|+||+||++|+|++|+.||.+.+.......+...++.+..+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 543221 1234678899999988665568999999999999999999999999988888888888888887776654
Q ss_pred hcCcCCcCc---cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCCCCCCCC
Q 017139 263 CMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPL 339 (376)
Q Consensus 263 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~~~~~~~ 339 (376)
......... ..+.....++.. ....+++++.++|.+||+.||++|||+.++++||||+.+..+..... ...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~--~~~~~~ 312 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNK-LFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPV--AEEPFP 312 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHH-HhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCccc--CCCCCC
Confidence 332211100 011111111211 12346889999999999999999999999999999998866522211 112234
Q ss_pred CCchhhhhcCCHHHHhhhcHHHH
Q 017139 340 FNFKQELAGASPELINRLIPEHV 362 (376)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~ 362 (376)
++|... .....+.+.+++.+++
T Consensus 313 ~~~~~~-~~~~~~~~~~~~~~~~ 334 (336)
T cd07849 313 FDFELF-DDLPKEKLKELIFEEI 334 (336)
T ss_pred hhhccc-cccCHHHHHHHHHHHh
Confidence 444432 3444555556555544
No 65
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.6e-46 Score=360.84 Aligned_cols=282 Identities=23% Similarity=0.358 Sum_probs=212.5
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhCCC------CCeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLMDH------PNVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h------~~Iv~~~~~~~~~~~~~ 103 (376)
.++|++.+.||+|+||+||+|.+..+++.||||++.... .....|+.+++.+.| .+++++++++. .+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~----~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ----NE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE----cC
Confidence 468999999999999999999999999999999986432 223457777777655 45788877763 23
Q ss_pred ceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC---------
Q 017139 104 ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--------- 174 (376)
Q Consensus 104 ~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~--------- 174 (376)
...+|+|||+++++|.+.+.. ...+++..++.|+.||+.||+|||+..||+||||||+|||++..+.
T Consensus 204 ~~~~~iv~~~~g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 TGHMCIVMPKYGPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CceEEEEEeccCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 346889999998888877764 3579999999999999999999997139999999999999985322
Q ss_pred ------cEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 017139 175 ------QVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 248 (376)
Q Consensus 175 ------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~ 248 (376)
.+||+|||.+.... .......||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~-~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 356 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGL-GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL 356 (467)
T ss_pred cCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 49999999875432 233456789999999999765 489999999999999999999999999998888888
Q ss_pred HHHhcCCCCHHHHhhcCcC-----CcCc--cCCCCCCCCcccc-----cc-cCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 249 IIKVLGTPTREEIRCMNPN-----YTDF--RFPQIKAHPWHKV-----FH-KRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~-----~~-~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
+.+.+|.++.......... +... ..+......+... .. ...++.+.|||.+||++||.+|||++|+|
T Consensus 357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L 436 (467)
T PTZ00284 357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT 436 (467)
T ss_pred HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence 8888887765433211000 0000 0000000000000 00 01246688999999999999999999999
Q ss_pred CCCccccccC
Q 017139 316 AHPFFDELRE 325 (376)
Q Consensus 316 ~hp~~~~~~~ 325 (376)
+||||.....
T Consensus 437 ~Hp~~~~~~~ 446 (467)
T PTZ00284 437 THPYVLKYYP 446 (467)
T ss_pred cCccccccCC
Confidence 9999987543
No 66
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-46 Score=353.37 Aligned_cols=255 Identities=29% Similarity=0.471 Sum_probs=203.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.|++++.||+|+||+||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .+...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence 5899999999999999999999999999999986432 2234689999999999999999988 445569
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+|||||+| +|.+.+.. ...+++..++.++.||+.||+|||+ .||+||||||+|||++. ++.+||+|||++..
T Consensus 77 ~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~-~~~~kL~DFGl~~~ 150 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDL-DGHIKLTDFGLCTG 150 (381)
T ss_pred EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECC-CCCEEEeeCcCCcc
Confidence 999999986 66555543 4568999999999999999999999 79999999999999996 78899999998753
Q ss_pred cccCC------------------------------------------------CcceeeccccccChhhhhCCCCCCccc
Q 017139 187 LVKGE------------------------------------------------ANISYICSRYYRAPELIFGATEYTTSI 218 (376)
Q Consensus 187 ~~~~~------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~ 218 (376)
..... ...+..||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~ 229 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK-GYTQLC 229 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC-CCCCcc
Confidence 21000 01235689999999999764 489999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHH
Q 017139 219 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLAS 298 (376)
Q Consensus 219 DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 298 (376)
|||||||++|+|++|..||...+..+....+...... ..++ ....+++++++||.
T Consensus 230 DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------~~~~----------~~~~~s~~~~dli~ 284 (381)
T cd05626 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENT---------------LHIP----------PQVKLSPEAVDLIT 284 (381)
T ss_pred ceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccc---------------cCCC----------CCCCCCHHHHHHHH
Confidence 9999999999999999999887765555444321110 0011 11247899999999
Q ss_pred hhcCC--CCCCCCCHHHHhCCCccccccCC
Q 017139 299 RLLQY--SPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 299 ~~L~~--dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
+||.. +|..|++++++++||||+++.+.
T Consensus 285 ~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 285 KLCCSAEERLGRNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred HHccCcccccCCCCHHHHhcCcccCCCChh
Confidence 96654 45559999999999999987664
No 67
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.2e-46 Score=336.99 Aligned_cols=276 Identities=34% Similarity=0.647 Sum_probs=218.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||+|++|.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .++..+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVL-----MQESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEE-----eeCCeEE
Confidence 5899999999999999999999999999999885431 2345799999999999999999998 4445689
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+||||++++|...+.... .+..+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 76 LIFEFLSMDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDN-KGVIKLADFGLARAFG 152 (285)
T ss_pred EEEecCCCCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcC-CCcEEECcccceeecC
Confidence 999999988777765432 24678999999999999999999999 79999999999999996 7889999999987543
Q ss_pred cCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
... ......+++.|+|||.+.+...++.++|+|||||++|+|++|++||.+....+....+....+.+....+......
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 153 IPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred CCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence 222 1223456889999999876656789999999999999999999999998887777777777766655444321110
Q ss_pred CcCc--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 268 YTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 268 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.++ .++....... ......+++++.++|.+||+.||++|||+.+++.||||
T Consensus 233 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 233 -PDYKNTFPKWKKGSL-RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred -HHHHhhccccCcchh-HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 000 0111111111 11233579999999999999999999999999999998
No 68
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7e-47 Score=352.28 Aligned_cols=256 Identities=33% Similarity=0.531 Sum_probs=211.6
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||+|++..+++.||+|++.... .....|+.++..++||||+++++++ .++.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 47999999999999999999999999999999986432 2345689999999999999999888 55667
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+++ +|.+.+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~-~~~~kL~Dfg~~~ 149 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDA-DGHIKLADFGLCK 149 (350)
T ss_pred EEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEeecCCCCc
Confidence 9999999985 66666654 3679999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCC------------------------------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCC
Q 017139 186 VLVKGE------------------------------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 235 (376)
Q Consensus 186 ~~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~ 235 (376)
...... ......||+.|+|||++.+. .++.++|||||||++|+|++|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~ 228 (350)
T cd05573 150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFP 228 (350)
T ss_pred cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCC
Confidence 654432 22345689999999999765 58999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-HHHH
Q 017139 236 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-ALEA 314 (376)
Q Consensus 236 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~el 314 (376)
||...+.......+...... ..++ ....+++++.+||.+||. ||.+|++ ++++
T Consensus 229 Pf~~~~~~~~~~~i~~~~~~---------------~~~p----------~~~~~~~~~~~li~~ll~-dp~~R~~s~~~l 282 (350)
T cd05573 229 PFYSDTLQETYNKIINWKES---------------LRFP----------PDPPVSPEAIDLICRLLC-DPEDRLGSFEEI 282 (350)
T ss_pred CCCCCCHHHHHHHHhccCCc---------------ccCC----------CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHH
Confidence 99988766665555431110 0111 111368999999999998 9999999 9999
Q ss_pred hCCCccccccCCC
Q 017139 315 CAHPFFDELREPN 327 (376)
Q Consensus 315 l~hp~~~~~~~~~ 327 (376)
++||||+.+.+..
T Consensus 283 l~hp~~~~~~~~~ 295 (350)
T cd05573 283 KSHPFFKGIDWEN 295 (350)
T ss_pred hcCCCcCCCCHHH
Confidence 9999999887654
No 69
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6e-46 Score=344.10 Aligned_cols=320 Identities=35% Similarity=0.620 Sum_probs=244.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.++|.+.+.||.|+||+||+|++..+++.||||.+.... ....+|+.+++.++|+||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 357999999999999999999999999999999885421 22346899999999999999999875443333456
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+|+|+||+.++|...+.. ...+++..++.++.|++.||.|||+ ++++|+||||+||+++. ++.+||+|||++..
T Consensus 84 ~~lv~e~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMDTDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNA-NCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCCCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcC-CCCEEECcCccccc
Confidence 899999999887766653 4679999999999999999999999 79999999999999996 77899999999876
Q ss_pred cccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... .......++..|+|||.+.....++.++|+|||||++|+|++|.+||.+.+.......+....+.+..+.+....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T cd07858 158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR 237 (337)
T ss_pred cCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence 5433 222345678899999998654458999999999999999999999999888888888888888877766553222
Q ss_pred cCCc-Cc--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCCCCCCCCCCc
Q 017139 266 PNYT-DF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNF 342 (376)
Q Consensus 266 ~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~ 342 (376)
.... .+ ..+......+. .....+++++.++|.+||+.||++|||++++++||||..+..+..... . +..+.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~-~---~~~~~~ 312 (337)
T cd07858 238 NEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPV-C---QTPFSF 312 (337)
T ss_pred chhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCcc-C---CCccch
Confidence 1110 00 01111111111 123468999999999999999999999999999999998876653322 1 223344
Q ss_pred hhhhhcCCHHHHhhhcHHHHH
Q 017139 343 KQELAGASPELINRLIPEHVR 363 (376)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~ 363 (376)
+-+..+.+.+.+.+++-.++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~ 333 (337)
T cd07858 313 DFEEDALTEEDIKELIYNEML 333 (337)
T ss_pred hhhhhhcCHHHHHHHHHHHHh
Confidence 444444677788877765543
No 70
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.8e-46 Score=351.37 Aligned_cols=259 Identities=26% Similarity=0.441 Sum_probs=211.1
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
...++|++.+.||+|+||.||+|++..+++.||+|++.+.. ....+|+.+++.++||||+++++++ .+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~ 114 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QD 114 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ec
Confidence 45678999999999999999999999999999999985421 2234689999999999999999888 55
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
..++|+|||||+| +|...+.. ..+++..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~-~~~~kL~DfG 187 (370)
T cd05596 115 DKYLYMVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDK-SGHLKLADFG 187 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcC-CCCEEEEecc
Confidence 6669999999985 66655543 458899999999999999999999 79999999999999996 7889999999
Q ss_pred CccccccCC--CcceeeccccccChhhhhCCC---CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 183 SAKVLVKGE--ANISYICSRYYRAPELIFGAT---EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 183 ~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
++....... ......||+.|+|||++.+.. .++.++|+|||||++|+|++|..||.+.+.......+......
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-- 265 (370)
T cd05596 188 TCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS-- 265 (370)
T ss_pred ceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc--
Confidence 987654332 223457899999999986432 3788999999999999999999999988776666555431110
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCC--CCCHHHHhCCCccccccCC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELREP 326 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~~~~~~~~ 326 (376)
..++. ...++.++++||.+||+.+|.+ |+|++++++||||+...+.
T Consensus 266 -------------~~~~~----------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~~ 313 (370)
T cd05596 266 -------------LTFPD----------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWT 313 (370)
T ss_pred -------------CCCCC----------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCChh
Confidence 01110 1247899999999999999998 9999999999999875543
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.2e-46 Score=345.10 Aligned_cols=243 Identities=31% Similarity=0.522 Sum_probs=200.7
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .+...+|+|||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 799999999999999999999999986431 1234688999999999999999888 4455689999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC-CC
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-EA 192 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~-~~ 192 (376)
++ +|...+.. ...+++..++.++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||+++..... ..
T Consensus 76 ~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~-~~~~kl~Dfg~~~~~~~~~~~ 149 (312)
T cd05585 76 NGGELFHHLQR----EGRFDLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDY-QGHIALCDFGLCKLNMKDDDK 149 (312)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECC-CCcEEEEECcccccCccCCCc
Confidence 86 55555543 4578999999999999999999999 79999999999999996 788999999998754322 22
Q ss_pred cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCcc
Q 017139 193 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 272 (376)
Q Consensus 193 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (376)
.....||+.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+...
T Consensus 150 ~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~-------------------- 208 (312)
T cd05585 150 TNTFCGTPEYLAPELLLGH-GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE-------------------- 208 (312)
T ss_pred cccccCCcccCCHHHHcCC-CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC--------------------
Confidence 3345789999999999765 4899999999999999999999999887766555544321
Q ss_pred CCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC---CHHHHhCCCccccccC
Q 017139 273 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC---TALEACAHPFFDELRE 325 (376)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~ell~hp~~~~~~~ 325 (376)
...++..+++++.++|.+||..||.+|| ++.++++||||.+..+
T Consensus 209 ---------~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~ 255 (312)
T cd05585 209 ---------PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSW 255 (312)
T ss_pred ---------CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCH
Confidence 0013446789999999999999999997 5899999999998644
No 72
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.4e-46 Score=354.15 Aligned_cols=254 Identities=29% Similarity=0.475 Sum_probs=205.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
+|++++.||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .+...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence 5899999999999999999999999999999986532 2345699999999999999999998 445569
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+|||||++ +|...+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++..
T Consensus 77 ~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~-~g~~kL~DFGla~~ 150 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDR-DGHIKLTDFGLCTG 150 (382)
T ss_pred EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEEeECCCCcc
Confidence 999999986 56665543 3568999999999999999999999 79999999999999996 78899999999753
Q ss_pred cccC------------------------------------------------CCcceeeccccccChhhhhCCCCCCccc
Q 017139 187 LVKG------------------------------------------------EANISYICSRYYRAPELIFGATEYTTSI 218 (376)
Q Consensus 187 ~~~~------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 218 (376)
.... .......||+.|+|||++.+. .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~ 229 (382)
T cd05625 151 FRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLC 229 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC-CCCCee
Confidence 2100 001134689999999999765 489999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHH
Q 017139 219 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLAS 298 (376)
Q Consensus 219 DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 298 (376)
|||||||++|+|++|.+||.+.+..+....+...... ...| ....+++++.++|.
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------~~~p----------~~~~~s~~~~~li~ 284 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTS---------------LHIP----------PQAKLSPEASDLII 284 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCC---------------cCCC----------CcccCCHHHHHHHH
Confidence 9999999999999999999988776655554431110 0011 11357899999999
Q ss_pred hhcCCCCCCCCC---HHHHhCCCccccccCC
Q 017139 299 RLLQYSPSLRCT---ALEACAHPFFDELREP 326 (376)
Q Consensus 299 ~~L~~dP~~R~t---~~ell~hp~~~~~~~~ 326 (376)
+|+ .||.+|++ ++++++||||+.+.+.
T Consensus 285 ~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 285 KLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 986 59999997 9999999999987654
No 73
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-47 Score=347.82 Aligned_cols=254 Identities=29% Similarity=0.470 Sum_probs=223.2
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.++|..++++|+|+||.+++++++.++..|++|++.-. +.....|..+++++.|||||.+.+.|. .++.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~~ 78 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQL 78 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCce
Confidence 46799999999999999999999999999999998543 234567999999999999999999983 34445
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
++|||+||+| ++.+.+.... +..++++.+..|+.|++.|+.|||+ ++|+|||||+.|||+++ ++.|||+|||+|+
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~-~~iLHRDlK~~Nifltk-~~~VkLgDfGlaK 154 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHE-NRVLHRDLKCANIFLTK-DKKVKLGDFGLAK 154 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHh-hhhhcccchhhhhhccc-cCceeecchhhhh
Confidence 9999999996 6777776644 5779999999999999999999999 89999999999999997 6668999999999
Q ss_pred ccccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...+.. ...+.+||+.|++||++.+. .|+.++|||||||++|||++-+++|.+.+-.....++.+....|
T Consensus 155 ~l~~~~~~a~tvvGTp~YmcPEil~d~-pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~P-------- 225 (426)
T KOG0589|consen 155 ILNPEDSLASTVVGTPYYMCPEILSDI-PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSP-------- 225 (426)
T ss_pred hcCCchhhhheecCCCcccCHHHhCCC-CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCC--------
Confidence 988776 66788999999999999765 49999999999999999999999999999888888887754332
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
.+...+.+++.+|+.||..+|..||++.++|.+|.+...
T Consensus 226 --------------------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 226 --------------------LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred --------------------CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 345679999999999999999999999999999998743
No 74
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-45 Score=343.84 Aligned_cols=286 Identities=33% Similarity=0.594 Sum_probs=226.0
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~~ 104 (376)
..++|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++..... .+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999999999999999985431 123369999999999999999998753322 223
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+|+||||+.+++...+.. .+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~-~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKS-DCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccCCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECC-CCCEEEccCccc
Confidence 45789999999988776653 28899999999999999999999 79999999999999996 778999999999
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.............+++.|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+.......+...++.+..+.....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T cd07850 166 RTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL 244 (353)
T ss_pred eeCCCCCCCCCCcccccccCHHHHhCC-CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence 876544444455678899999999765 4899999999999999999999999999888888888888888876554433
Q ss_pred CcCCcCcc--CCCCCCCCccccc------------ccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 265 NPNYTDFR--FPQIKAHPWHKVF------------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~~~~~~~--~~~~~~~~~~~~~------------~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
......+. .+.....++...+ +...+++++++|.+||+.||++|||+.++|.||||+.+-.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~ 320 (353)
T cd07850 245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDP 320 (353)
T ss_pred hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCC
Confidence 22111110 0000011111111 22456789999999999999999999999999999876554
No 75
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.5e-47 Score=355.32 Aligned_cols=254 Identities=28% Similarity=0.447 Sum_probs=204.8
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
+|++.+.||+|+||.||+|++..+++.||+|++... .....+|+.+++.++||||+++++.+ .++..+
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~ 76 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCEE
Confidence 699999999999999999999999999999998542 12345799999999999999999988 555679
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+|||||+| +|.+.+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++..
T Consensus 77 ~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~-~~~ikL~DFG~a~~ 150 (376)
T cd05598 77 YFVMDYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDR-DGHIKLTDFGLCTG 150 (376)
T ss_pred EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECC-CCCEEEEeCCCCcc
Confidence 999999985 66666654 4568999999999999999999999 79999999999999996 78899999999742
Q ss_pred cccC--------------------------------------------CCcceeeccccccChhhhhCCCCCCccchhHH
Q 017139 187 LVKG--------------------------------------------EANISYICSRYYRAPELIFGATEYTTSIDIWS 222 (376)
Q Consensus 187 ~~~~--------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws 222 (376)
.... .......||+.|+|||++.+. .++.++||||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwS 229 (376)
T cd05598 151 FRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWS 229 (376)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC-CCCcceeeee
Confidence 2100 001134689999999999765 4899999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcC
Q 017139 223 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 302 (376)
Q Consensus 223 lG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 302 (376)
|||++|+|++|..||.+.+..+....+...... ..++ ....+++++.++|.+|+
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------~~~~----------~~~~~s~~~~~li~~l~- 283 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQLKVINWETT---------------LHIP----------SQAKLSREASDLILRLC- 283 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHHHHhccCcc---------------ccCC----------CCCCCCHHHHHHHHHHh-
Confidence 999999999999999988766555444321100 0011 11247899999999977
Q ss_pred CCCCCCC---CHHHHhCCCccccccCC
Q 017139 303 YSPSLRC---TALEACAHPFFDELREP 326 (376)
Q Consensus 303 ~dP~~R~---t~~ell~hp~~~~~~~~ 326 (376)
.+|.+|+ +++++++||||+.+...
T Consensus 284 ~~p~~R~~~~t~~ell~h~~~~~~~~~ 310 (376)
T cd05598 284 CGAEDRLGKNGADEIKAHPFFKGIDFA 310 (376)
T ss_pred cCHhhcCCCCCHHHHhCCCCcCCCCHH
Confidence 5999999 99999999999987554
No 76
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2e-46 Score=344.64 Aligned_cols=246 Identities=30% Similarity=0.507 Sum_probs=201.4
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|+++.+++.||+|++.+.. .....|..++..+ +||||+++++++ .+...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999986432 1223566777665 799999999988 4555689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
|||++ +|...+.. ...+++..++.++.|++.||.|||+ +|++||||||+|||++. ++.+||+|||++.....
T Consensus 76 Ey~~~g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~-~~~~kL~DfG~~~~~~~~ 149 (320)
T cd05590 76 EFVNGGDLMFHIQK----SRRFDEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDH-EGHCKLADFGMCKEGIFN 149 (320)
T ss_pred cCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECC-CCcEEEeeCCCCeecCcC
Confidence 99996 55544443 4679999999999999999999999 79999999999999996 78899999999875432
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........||+.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~---------------- 212 (320)
T cd05590 150 GKTTSTFCGTPDYIAPEILQEM-LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE---------------- 212 (320)
T ss_pred CCcccccccCccccCHHHHcCC-CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC----------------
Confidence 2233345689999999998654 48999999999999999999999999888776665554310
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH------HHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA------LEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~------~ell~hp~~~~~~~~ 326 (376)
..++..++.++.++|.+||+.||.+|+++ +++++||||+.+.+.
T Consensus 213 -------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~ 262 (320)
T cd05590 213 -------------VVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWE 262 (320)
T ss_pred -------------CCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHH
Confidence 01234578999999999999999999998 899999999987654
No 77
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3.9e-46 Score=348.75 Aligned_cols=258 Identities=27% Similarity=0.441 Sum_probs=209.2
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-------ccchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
...++|++.+.||+|+||.||+|++..+++.+|+|++.+. .....+|+.+++.++||||+++++++ .+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~ 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QD 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----Ec
Confidence 4557899999999999999999999999999999998542 12344789999999999999999988 55
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
+..+|+|||||+| +|.+.+.. ..+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~-~~~~kL~DFG 187 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDK-HGHLKLADFG 187 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECC-CCCEEEEecc
Confidence 5669999999985 66666543 458899999999999999999999 79999999999999996 7889999999
Q ss_pred CccccccCCC--cceeeccccccChhhhhCCC---CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 183 SAKVLVKGEA--NISYICSRYYRAPELIFGAT---EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 183 ~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
++........ .....||+.|+|||++.+.. .++.++|+||+||++|+|++|..||.+.+.......+.......
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~- 266 (370)
T cd05621 188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL- 266 (370)
T ss_pred cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc-
Confidence 9986543222 23567899999999986532 37889999999999999999999999887766666655421110
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCC--CCCHHHHhCCCccccccC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELRE 325 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~~~~~~~ 325 (376)
.++ ....++..+++++.+||+.++.+ |++++++++||||+...+
T Consensus 267 --------------~~p----------~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~~ 312 (370)
T cd05621 267 --------------NFP----------EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 312 (370)
T ss_pred --------------CCC----------CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCCc
Confidence 011 01246889999999999866654 899999999999987544
No 78
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.2e-46 Score=347.11 Aligned_cols=246 Identities=26% Similarity=0.426 Sum_probs=201.8
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.||+|+||.||+|++..+++.||+|++.... ....+|+.+++.++||||+++++++ .++..+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999986532 1234688999999999999999888 45556899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC-
Q 017139 113 YVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG- 190 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~- 190 (376)
|+++ +|...+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+++.....
T Consensus 76 y~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~-~~~~kL~DfG~~~~~~~~~ 149 (328)
T cd05593 76 YVNGGELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDK-DGHIKITDFGLCKEGITDA 149 (328)
T ss_pred CCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECC-CCcEEEecCcCCccCCCcc
Confidence 9986 55444433 4679999999999999999999999 79999999999999996 788999999998754322
Q ss_pred CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 191 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 191 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
.......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+... .
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~-----------------~ 211 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------------D 211 (328)
T ss_pred cccccccCCcCccChhhhcCC-CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC-----------------C
Confidence 222345689999999999765 4899999999999999999999999887665544433220 0
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
..++..+++++.+||.+||.+||++|+ ++.++++||||...++.
T Consensus 212 ------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 260 (328)
T cd05593 212 ------------IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQ 260 (328)
T ss_pred ------------ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 013456799999999999999999997 89999999999886553
No 79
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.3e-46 Score=347.53 Aligned_cols=258 Identities=27% Similarity=0.468 Sum_probs=210.6
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||+|++..+|+.||+|++.... ....+|+.+++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 46999999999999999999999999999999986532 2345788999999999999999887 45556
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+++ +|.+.+... ...+++..++.++.|++.||.|||+ .||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~-~~~~kL~Dfg~a~ 150 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDR-TGHIKLADFGSAA 150 (330)
T ss_pred EEEEECCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECC-CCCEEeccCCCCe
Confidence 8999999975 666666542 3579999999999999999999999 79999999999999996 7889999999997
Q ss_pred ccccCCCc--ceeeccccccChhhhhC-----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 186 VLVKGEAN--ISYICSRYYRAPELIFG-----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 186 ~~~~~~~~--~~~~~t~~y~aPE~~~~-----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
........ ....||+.|+|||++.. ...++.++|||||||++|+|++|..||...+....+..+......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~--- 227 (330)
T cd05601 151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF--- 227 (330)
T ss_pred ECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc---
Confidence 65443322 23468999999999863 334788999999999999999999999888776666555432100
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
..++ ....+++++.+||.+||+ ||++|||++++++||||+.+++..
T Consensus 228 ------------~~~~----------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~~ 273 (330)
T cd05601 228 ------------LKFP----------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWNN 273 (330)
T ss_pred ------------cCCC----------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHHH
Confidence 0011 112478999999999998 999999999999999999877654
No 80
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.4e-46 Score=346.04 Aligned_cols=246 Identities=26% Similarity=0.437 Sum_probs=202.7
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.||+|+||.||+|++..+|+.||+|++.... ....+|+.+++.++||||+++++++ ..+..+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 47999999999999999999999999986432 1223688999999999999999988 44556899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC-
Q 017139 113 YVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG- 190 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~- 190 (376)
|+++ +|...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~~~~~~~ 149 (323)
T cd05595 76 YANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDK-DGHIKITDFGLCKEGISDG 149 (323)
T ss_pred CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcC-CCCEEecccHHhccccCCC
Confidence 9986 55444433 4578999999999999999999999 79999999999999996 788999999998753322
Q ss_pred CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 191 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 191 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
.......|++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+.......+... .
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~-----------------~ 211 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-----------------E 211 (323)
T ss_pred CccccccCCcCcCCcccccCC-CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----------------C
Confidence 222345689999999998665 4899999999999999999999999887766555544321 0
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
. .++..+++++.++|.+||..||++|+ ++.++++||||.+..+.
T Consensus 212 ~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~ 260 (323)
T cd05595 212 I------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ 260 (323)
T ss_pred C------------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHH
Confidence 0 13346799999999999999999998 89999999999887654
No 81
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.9e-46 Score=343.43 Aligned_cols=251 Identities=29% Similarity=0.457 Sum_probs=205.2
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCC-CeeecceeeeecCCCCcee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHP-NVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~-~Iv~~~~~~~~~~~~~~~~ 106 (376)
+|++.+.||+|+||.||+|++..+++.||+|++.... .....|..++..+.|+ +|+.+++++ .+...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 5899999999999999999999999999999986432 1233577888888765 577887777 44456
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+|||||+| +|...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~-~~~~kL~Dfg~~~ 149 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDA-EGHIKIADFGMCK 149 (324)
T ss_pred EEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcC-CCCEEEeecCcce
Confidence 8999999985 55555543 4568999999999999999999999 79999999999999996 7789999999987
Q ss_pred cccc-CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVK-GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.... ........||+.|+|||++.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+....
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~----------- 217 (324)
T cd05587 150 ENIFGGKTTRTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN----------- 217 (324)
T ss_pred ecCCCCCceeeecCCccccChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------
Confidence 5322 22333567899999999997654 8999999999999999999999999888776665554311
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH-----HHHhCCCccccccCC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~~~~~~~~ 326 (376)
..++..+++++.+++.+||.+||.+|+++ +++++||||+.+++.
T Consensus 218 ------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~ 266 (324)
T cd05587 218 ------------------VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWE 266 (324)
T ss_pred ------------------CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 01334578999999999999999999986 899999999987664
No 82
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=9.1e-46 Score=334.95 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=208.5
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.|++.+.||+|+||.||++.+..+++.||+|++.... ....+|+.+++.++||||+++++++ .....+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 4899999999999999999999999999999986432 1234689999999999999999888 445569
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+||||+.+ +|...+... ....+++..+..++.|++.||.|||+ +|++||||||+||+++. ++.++|+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDD-YGHIRISDLGLAVE 151 (285)
T ss_pred EEEEeccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECC-CCCEEEeeCCCcee
Confidence 999999985 555444331 23568999999999999999999999 79999999999999996 78899999999987
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
...........|++.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+.......
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~---------- 220 (285)
T cd05605 152 IPEGETIRGRVGTVGYMAPEVVKNE-RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED---------- 220 (285)
T ss_pred cCCCCccccccCCCCccCcHHhcCC-CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc----------
Confidence 6444443455789999999999764 48999999999999999999999998876544433333211100
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
...++..++..+.+||.+||..||++|| +++++++||||...++.
T Consensus 221 ---------------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05605 221 ---------------QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK 270 (285)
T ss_pred ---------------ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence 0112345789999999999999999999 89999999999886554
No 83
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.5e-45 Score=334.29 Aligned_cols=286 Identities=34% Similarity=0.554 Sum_probs=226.2
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
..++|++.+.||.|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++++++.. ....
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCC
Confidence 4578999999999999999999999999999999885432 123469999999999999999998743 2234
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+++||||+.++|.+.+... ...+++..++.++.|++.||.|||+ .|++||||+|+||+++. ++.+||+|||.+.
T Consensus 82 ~~~lv~e~~~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~kL~dfg~~~ 156 (309)
T cd07845 82 SIFLVMEYCEQDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTD-KGCLKIADFGLAR 156 (309)
T ss_pred eEEEEEecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEECccceee
Confidence 57899999999887777643 3568999999999999999999999 79999999999999996 7789999999988
Q ss_pred ccccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+.+..+....+.+....+...
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 157 TYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred ecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 664432 2223345788999999876666899999999999999999999999999999999999988887776554432
Q ss_pred CcC--CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 265 NPN--YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
... ...+..+......+... ....++++.++|.+||.+||++|||++++++||||++...+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHK-FPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP 299 (309)
T ss_pred hcccccccccccCCCCCchHHh-ccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence 211 11111111111111111 12368899999999999999999999999999999865433
No 84
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.7e-46 Score=342.34 Aligned_cols=249 Identities=28% Similarity=0.464 Sum_probs=202.9
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHH---HhCCCCCeeecceeeeecCCCCce
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLM---RLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l---~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.++ +.++||||+++++++ ....
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 788999999999999999999999999999986432 1222454444 566899999999988 4455
Q ss_pred eEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+|+|||||+|+ |...+. ...+++..++.++.||+.||.|||+ +|++||||||+||+++. ++.+||+|||++
T Consensus 76 ~~~lv~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~-~~~~kL~Dfg~~ 148 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDT-EGFVKIADFGLC 148 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECC-CCcEEeCcccCC
Confidence 689999999974 433332 3569999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 185 KVLVKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 185 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
...... .......|++.|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~---------- 217 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTET-SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE---------- 217 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCC-CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----------
Confidence 753322 223356789999999998764 48999999999999999999999999887766665544310
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
..++..++.++.++|.+||+.||++|| ++.++++||||+++.+.
T Consensus 218 -------------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~ 266 (324)
T cd05589 218 -------------------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWD 266 (324)
T ss_pred -------------------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHH
Confidence 013345789999999999999999999 69999999999987654
No 85
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.3e-45 Score=337.39 Aligned_cols=278 Identities=31% Similarity=0.560 Sum_probs=209.0
Q ss_pred eeeeccCCceEEEEEEEcC--CCcEEEEEEecccc--cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 39 ERVVGTGSFGIVFQAKCLE--TGETVAIKKVLQDR--RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
+.+||+|+||.||+|++.. ++..||+|.+.... ....+|+.+++.++||||+++++++.. ..+..+++||||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEeee
Confidence 4689999999999999754 56889999886543 234579999999999999999998754 3345688999999
Q ss_pred cchHHHHHHhhhh-----cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec---CCCCcEEEEecCCccc
Q 017139 115 PETMYRVLKHYSS-----MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD---PLTHQVKLCDFGSAKV 186 (376)
Q Consensus 115 ~g~l~~~l~~~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~---~~~~~~kl~Dfg~~~~ 186 (376)
++++...+..... ....+++..++.++.||+.||.|||+ +||+||||||+||++. ..++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 9988877753221 22358899999999999999999999 7999999999999994 2356899999999986
Q ss_pred cccCCC----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHHHhc
Q 017139 187 LVKGEA----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---------AVDQLVEIIKVL 253 (376)
Q Consensus 187 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~---------~~~~~~~~~~~~ 253 (376)
...... .....+|+.|+|||++.+...++.++||||+||++|+|++|.+||.... ....+..+...+
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 543321 2345678999999999775668999999999999999999999997543 235566677777
Q ss_pred CCCCHHHHhhcCcC--CcCc-------cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 254 GTPTREEIRCMNPN--YTDF-------RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 254 ~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
+.+....+...... +... .+................+..+.+||.+||+.||.+|||++|+|+||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 77766655432211 0000 0000000001111122346679999999999999999999999999998
No 86
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.2e-46 Score=334.38 Aligned_cols=252 Identities=26% Similarity=0.379 Sum_probs=201.3
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
||+|+||+||+|.+..+++.||+|.+.... .....|+.+++.++|+||+++.+++ .....+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999999999999999986432 1224688999999999999998887 4455689999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC-
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA- 192 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~- 192 (376)
++ +|...+......+..+++..+..++.||+.||+|||+ +||+||||||+||+++. ++.++|+|||++........
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~~~~~~ 153 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDN-DGNVRISDLGLAVELKDGQSK 153 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEeeCccceecCCCCcc
Confidence 85 5655554434445679999999999999999999999 79999999999999986 78899999999876543322
Q ss_pred cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCcc
Q 017139 193 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 272 (376)
Q Consensus 193 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (376)
.....|++.|+|||.+.+. .++.++|+|||||++|+|++|..||...........+.......
T Consensus 154 ~~~~~g~~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---------------- 216 (280)
T cd05608 154 TKGYAGTPGFMAPELLQGE-EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND---------------- 216 (280)
T ss_pred ccccCCCcCccCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc----------------
Confidence 2345689999999999765 48999999999999999999999998654332222222111000
Q ss_pred CCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 273 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
...++..+++++.+++.+||+.||++|+ +++++++||||+.+.+.
T Consensus 217 ---------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~ 266 (280)
T cd05608 217 ---------SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR 266 (280)
T ss_pred ---------CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence 0013346789999999999999999999 88999999999987665
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.2e-46 Score=345.24 Aligned_cols=256 Identities=30% Similarity=0.472 Sum_probs=202.3
Q ss_pred ceEeeeeeccCCceEEEEEEEc---CCCcEEEEEEecccc--------cchHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 35 SYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~--------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
+|++.+.||+|+||.||+|++. .+++.||+|++.+.. .....|+.+++.+ +||||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4899999999999999999874 478999999985421 1234688899999 589999999888 5
Q ss_pred CceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
.+..+|+|||||++ +|.+.+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~-~~~~kl~Df 149 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDS-EGHVVLTDF 149 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECC-CCCEEEeeC
Confidence 55668999999986 66565543 4668999999999999999999999 79999999999999996 778999999
Q ss_pred CCccccccCC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 182 GSAKVLVKGE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 182 g~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
|+++...... ......||+.|+|||++.+...++.++|||||||++|+|++|..||...........+......
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~---- 225 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK---- 225 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc----
Confidence 9987653322 2234578999999999976555789999999999999999999999754322111111111000
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
....++..+++.+.++|.+||+.||++|+ +++++++||||+...+.
T Consensus 226 ---------------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 276 (332)
T cd05614 226 ---------------------CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWE 276 (332)
T ss_pred ---------------------CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 00113345789999999999999999999 88899999999987554
No 88
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.3e-46 Score=342.14 Aligned_cols=246 Identities=29% Similarity=0.476 Sum_probs=202.0
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+++.||+|++.... .....|.+++..+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 46999999999999999999999999986532 1123577777755 799999999998 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
|||++ +|...+.. ...+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.+||+|||++......
T Consensus 76 E~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~-~~~~kL~Dfg~~~~~~~~ 149 (321)
T cd05591 76 EYVNGGDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDA-EGHCKLADFGMCKEGILN 149 (321)
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEEeecccceecccC
Confidence 99986 55544443 4678999999999999999999999 79999999999999996 788999999998754322
Q ss_pred -CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 191 -EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 191 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
.......|++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+.+..+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~---------------- 212 (321)
T cd05591 150 GVTTTTFCGTPDYIAPEILQEL-EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD---------------- 212 (321)
T ss_pred CccccccccCccccCHHHHcCC-CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC----------------
Confidence 223345689999999998654 48999999999999999999999999888777666554310
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-------CHHHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-------TALEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-------t~~ell~hp~~~~~~~~ 326 (376)
..++..+++++.++|.+||+.||++|+ +++++++||||..+++.
T Consensus 213 -------------~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~ 263 (321)
T cd05591 213 -------------VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWV 263 (321)
T ss_pred -------------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHH
Confidence 012334689999999999999999999 99999999999887654
No 89
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.7e-45 Score=331.83 Aligned_cols=286 Identities=33% Similarity=0.593 Sum_probs=222.7
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCC-CCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.+. ||||+++++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46999999999999999999999999999999875432 23456999999995 699999999886544334456
Q ss_pred EEEEeecccchHHHHHHhhhhc-CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSM-NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.|+||||+++++...+...... ...+++..++.++.||+.||.|||+ +|++||||+|+||+++.+++.+||+|||.+.
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 8899999999888877654332 4568999999999999999999999 7999999999999999657889999999987
Q ss_pred ccccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...... ......+++.|+|||.+.+...++.++|+||||+++|+|++|..||.+.+....+..+....+.+....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 553321 2223356888999999876555789999999999999999999999998888888888777766665443321
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
........++......... ..+.++.++.+||.+||..||++||++++++.||||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSR-AVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhccchhhcCcccchhHHH-hccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 1111111111111111111 1235789999999999999999999999999999985
No 90
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.1e-46 Score=341.19 Aligned_cols=251 Identities=29% Similarity=0.436 Sum_probs=205.8
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhC-CCCCeeecceeeeecCCCCcee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
+|.+.+.||+|+||.||+|++..+++.||+|++.+... ....|..++..+ .|++|+++++++ .+...
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 58999999999999999999999999999999865321 123466666666 588999998888 44556
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+++ +|...+.. ...+++..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~-~~~~kL~DfG~~~ 149 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred EEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECC-CCcEEEccCCCce
Confidence 8999999985 65555543 4568999999999999999999999 79999999999999996 7889999999987
Q ss_pred cccc-CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVK-GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.... ........||+.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~----------- 217 (323)
T cd05616 150 ENMWDGVTTKTFCGTPDYIAPEIIAYQ-PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN----------- 217 (323)
T ss_pred ecCCCCCccccCCCChhhcCHHHhcCC-CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------
Confidence 5432 2223355689999999999765 48999999999999999999999999888776666655421
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH-----HHHhCCCccccccCC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~~~~~~~~ 326 (376)
..++..++.++.+++.+||+.||++|+++ .++++||||+.+++.
T Consensus 218 ------------------~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~ 266 (323)
T cd05616 218 ------------------VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE 266 (323)
T ss_pred ------------------CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 01334578999999999999999999984 899999999987764
No 91
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.9e-46 Score=344.46 Aligned_cols=247 Identities=28% Similarity=0.439 Sum_probs=201.0
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.||+|+||.||+|++..+|+.||+|++.... .....|..+++.++||||+++++++ .....+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999999999999986532 1223588899999999999999888 45556899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-C
Q 017139 113 YVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-G 190 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~-~ 190 (376)
|+++ +|...+. ....+++..++.++.||+.||.|||+.+||+||||||+|||++. ++.+||+|||++..... .
T Consensus 76 ~~~~~~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~-~~~~kL~Dfg~~~~~~~~~ 150 (325)
T cd05594 76 YANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK-DGHIKITDFGLCKEGIKDG 150 (325)
T ss_pred CCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC-CCCEEEecCCCCeecCCCC
Confidence 9996 4444443 24579999999999999999999996249999999999999996 78899999999875432 2
Q ss_pred CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 191 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 191 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
.......|++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+.......+... .
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~-----------------~ 212 (325)
T cd05594 151 ATMKTFCGTPEYLAPEVLEDN-DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-----------------E 212 (325)
T ss_pred cccccccCCcccCCHHHHccC-CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC-----------------C
Confidence 223345689999999999765 4899999999999999999999999887765554443221 0
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
. .++..+++++.++|.+||++||++|+ ++.++++||||+...+.
T Consensus 213 ~------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 213 I------------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred C------------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 0 13346789999999999999999997 89999999999986554
No 92
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-45 Score=344.62 Aligned_cols=278 Identities=25% Similarity=0.406 Sum_probs=207.5
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
..+|.+.+.||+|+||.||+|++..+++.||+|+..... ...|+.+++.++||||+++++++. .....++|||
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 137 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--TLIEAMLLQNVNHPSVIRMKDTLV-----SGAITCMVLP 137 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--cHHHHHHHHhCCCCCCcChhheEE-----eCCeeEEEEE
Confidence 457999999999999999999999999999999754432 346999999999999999999884 4445889999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC
Q 017139 113 YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 192 (376)
Q Consensus 113 ~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~ 192 (376)
++.++|...+.. ....+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||++........
T Consensus 138 ~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~~~~~~~ 212 (357)
T PHA03209 138 HYSSDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFIND-VDQVCIGDLGAAQFPVVAPA 212 (357)
T ss_pred ccCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEEecCccccccccCcc
Confidence 999988877754 34678999999999999999999999 79999999999999996 77899999999976544444
Q ss_pred cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCC-CCCCCCC---------hHHHHHHHHHhcCCCCHHHHh
Q 017139 193 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGEN---------AVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 193 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~-~pf~~~~---------~~~~~~~~~~~~~~~~~~~~~ 262 (376)
.....||+.|+|||++.+. .++.++|+|||||++|+|+++. .+|.... ....+..++..++..+.....
T Consensus 213 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 291 (357)
T PHA03209 213 FLGLAGTVETNAPEVLARD-KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR 291 (357)
T ss_pred cccccccccccCCeecCCC-CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence 4456789999999999765 4899999999999999999854 4444321 123344444444433221110
Q ss_pred hcCcCC-cC-ccCCCCCCCCc---ccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 263 CMNPNY-TD-FRFPQIKAHPW---HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 263 ~~~~~~-~~-~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
...... .. .........++ ...-...++.++.+||.+||++||.+|||+.|+|+||||+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 000000 00 00000000000 001112568889999999999999999999999999999863
No 93
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.6e-46 Score=347.30 Aligned_cols=256 Identities=28% Similarity=0.430 Sum_probs=207.0
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....|+.++..++||||+++++.+ .+...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 46999999999999999999999999999999985421 2234688999999999999999988 55566
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+|||||+| +|.+.+.. ...+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~-~~~vkL~DfG~~~ 149 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDA-KGHVKLSDFGLCT 149 (360)
T ss_pred EEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECC-CCCEEEeeccCCc
Confidence 9999999986 56665543 4679999999999999999999999 79999999999999996 7889999999986
Q ss_pred ccccCC------------------------------------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHH
Q 017139 186 VLVKGE------------------------------------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAE 229 (376)
Q Consensus 186 ~~~~~~------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 229 (376)
...... .....+||+.|+|||++.+. .++.++|+|||||++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~~DiwSlGvilye 228 (360)
T cd05627 150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT-GYNKLCDWWSLGVIMYE 228 (360)
T ss_pred ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC-CCCCcceeccccceeee
Confidence 442110 01235689999999999765 48999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC
Q 017139 230 LLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 309 (376)
Q Consensus 230 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 309 (376)
|++|..||.+.+.......+..... ...+|. ...++++++++|.+|+ .||.+|+
T Consensus 229 l~tG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~p~----------~~~~s~~~~~li~~l~-~~p~~R~ 282 (360)
T cd05627 229 MLIGYPPFCSETPQETYRKVMNWKE---------------TLVFPP----------EVPISEKAKDLILRFC-TDSENRI 282 (360)
T ss_pred cccCCCCCCCCCHHHHHHHHHcCCC---------------ceecCC----------CCCCCHHHHHHHHHhc-cChhhcC
Confidence 9999999998877666655543100 000110 0136889999999987 4999998
Q ss_pred ---CHHHHhCCCccccccCCC
Q 017139 310 ---TALEACAHPFFDELREPN 327 (376)
Q Consensus 310 ---t~~ell~hp~~~~~~~~~ 327 (376)
+++++++||||+++++..
T Consensus 283 ~~~~~~ei~~hp~f~~~~~~~ 303 (360)
T cd05627 283 GSNGVEEIKSHPFFEGVDWGH 303 (360)
T ss_pred CCCCHHHHhcCCCCCCCCHHH
Confidence 489999999999987754
No 94
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.5e-45 Score=339.04 Aligned_cols=275 Identities=27% Similarity=0.446 Sum_probs=206.2
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.++|++.+.||+|+||.||+|++..++..+|+|.+.... ....+|+++++.++||||+++++++. ++..+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEE
Confidence 468999999999999999999999999999999886542 23457999999999999999999884 34458
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++||||+++ +|.+.+.. ...+++..+..++.|++.||.|||+..+|+||||||+||+++. ++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 153 (331)
T cd06649 79 SICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS-RGEIKLCDFGVSGQ 153 (331)
T ss_pred EEEeecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC-CCcEEEccCccccc
Confidence 899999996 66666543 3568999999999999999999998336999999999999996 77899999999876
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh----
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR---- 262 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---- 262 (376)
.... ......+++.|+|||++.+. .++.++|+|||||++|+|++|+.||...+..+... +. +.+......
T Consensus 154 ~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~-~~---~~~~~~~~~~~~~ 227 (331)
T cd06649 154 LIDS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEA-IF---GRPVVDGEEGEPH 227 (331)
T ss_pred cccc-ccccCCCCcCcCCHhHhcCC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-Hh---cccccccccCCcc
Confidence 5332 23345689999999999765 48999999999999999999999998766544322 21 111100000
Q ss_pred hcCcCCcC-------c---cCC---------CCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 263 CMNPNYTD-------F---RFP---------QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 263 ~~~~~~~~-------~---~~~---------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
...+.... . ..+ .+............+++++++||.+||++||++|||++++++||||+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 228 SISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 00000000 0 000 0000000000112468899999999999999999999999999999864
No 95
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.2e-45 Score=339.27 Aligned_cols=246 Identities=29% Similarity=0.493 Sum_probs=201.2
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||+||+|.+..+++.||+|++.+.. .....|..+++.+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 47999999999999999999999999986532 1223577788777 699999999988 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
|||+| +|...+.. ...+++..+..++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~~~~~ 149 (318)
T cd05570 76 EYVNGGDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDS-EGHIKIADFGMCKEGILG 149 (318)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECC-CCcEEecccCCCeecCcC
Confidence 99986 55544443 4579999999999999999999999 79999999999999996 77899999999865322
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........|++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+.......+...
T Consensus 150 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~----------------- 211 (318)
T cd05570 150 GVTTSTFCGTPDYIAPEILSYQ-PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED----------------- 211 (318)
T ss_pred CCcccceecCccccCHHHhcCC-CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 2223345689999999999765 4899999999999999999999999887766555444321
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH-----HHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~~~~~~~~ 326 (376)
...++..++.++.+||.+||..||++||++ .++++||||+...+.
T Consensus 212 ------------~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 212 ------------EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred ------------CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 001334578999999999999999999999 999999999987653
No 96
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.6e-46 Score=342.81 Aligned_cols=246 Identities=28% Similarity=0.455 Sum_probs=199.2
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHH-HHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNREL-QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~-~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||+||+|++..+|+.||+|++..... ....|. .+++.++||||+++++.+ .+...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 479999999999999999999999999864321 111233 356789999999999888 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+++ +|...+.. +..+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~-~~~~kl~Dfg~~~~~~~~ 149 (323)
T cd05575 76 DYVNGGELFFHLQR----ERSFPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDS-QGHVVLTDFGLCKEGIEH 149 (323)
T ss_pred cCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECC-CCcEEEeccCCCcccccC
Confidence 99996 55555443 4678999999999999999999999 79999999999999996 788999999998754322
Q ss_pred -CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 191 -EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 191 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
.......|++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~---------------- 212 (323)
T cd05575 150 SKTTSTFCGTPEYLAPEVLRKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP---------------- 212 (323)
T ss_pred CCccccccCChhhcChhhhcCC-CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC----------------
Confidence 223345689999999998765 48999999999999999999999999887766655544310
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH----HHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~~~~~~~~ 326 (376)
..++..++.++.++|.+||+.||.+||++ .++++||||..+.+.
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~ 260 (323)
T cd05575 213 -------------LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWD 260 (323)
T ss_pred -------------CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHH
Confidence 00223578999999999999999999998 699999999887654
No 97
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-47 Score=341.35 Aligned_cols=251 Identities=27% Similarity=0.444 Sum_probs=208.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
...|+..+.||+|+||.||+|.+..+++.||+|++..+.. ..++|+.+|..++++||.++|+.|+.... +
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~-----L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK-----L 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeeccc-----H
Confidence 3468889999999999999999999999999999965432 34579999999999999999999965444 9
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+++||||.| ++.++++. +..+.+..+..++.+++.||.|||. ++.+|||||+.|||+.. ++.+||+|||.+..
T Consensus 87 wiiMey~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~-~g~vkl~DfgVa~q 160 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSE-SGDVKLADFGVAGQ 160 (467)
T ss_pred HHHHHHhcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhhh-cceecccccccceeEec-cCcEEEEecceeee
Confidence 999999996 55555543 4556899999999999999999999 79999999999999997 68899999999877
Q ss_pred cccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
...... ..+++|||+|||||++.+ ..|+.++||||||++.+||++|.+|+....+...+..|-+.
T Consensus 161 l~~~~~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~------------- 226 (467)
T KOG0201|consen 161 LTNTVKRRKTFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKS------------- 226 (467)
T ss_pred eechhhccccccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCC-------------
Confidence 655433 368899999999999985 45999999999999999999999999877664333222210
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
. -..+....++.+++|+..||.+||+.||+|.+||.|+|++..
T Consensus 227 -----------~----PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 227 -----------A----PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred -----------C----CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 0 001223578999999999999999999999999999999764
No 98
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.9e-45 Score=338.47 Aligned_cols=260 Identities=28% Similarity=0.431 Sum_probs=207.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||++++..+++.||+|++.+.. ....+|..+++.++|+||+++++++ .++..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 47999999999999999999999999999999986421 2244688899999999999999988 55566
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+.| +|.+.+.. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~ 150 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDK-NGHIRLADFGSCL 150 (331)
T ss_pred EEEEEecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECC-CCCEEEEECCcee
Confidence 9999999975 66666643 24568999999999999999999999 79999999999999986 7889999999987
Q ss_pred ccccCCCc--ceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 186 VLVKGEAN--ISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 186 ~~~~~~~~--~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
........ ....||+.|+|||++.. ...++.++|+||+||++|+|++|..||.+.+..+....+......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~---- 226 (331)
T cd05597 151 RLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEH---- 226 (331)
T ss_pred ecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc----
Confidence 65433222 23468999999999863 234788999999999999999999999887766665554432110
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCC--CCCHHHHhCCCccccccCCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELREPN 327 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~~~~~~~~~ 327 (376)
+.++. ....++.+++++|++||+.++.+ |++++++++||||...++..
T Consensus 227 -----------~~~~~---------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~~ 276 (331)
T cd05597 227 -----------FQFPP---------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWDN 276 (331)
T ss_pred -----------ccCCC---------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHHH
Confidence 00110 11247899999999999765554 78999999999998876643
No 99
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-45 Score=334.81 Aligned_cols=245 Identities=31% Similarity=0.457 Sum_probs=200.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcE-EEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGET-VAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~-~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
....+.+.||+|+||+||++... |+. ||+|++.... ..+.+|+.+|.+++|||||++++++.... ..
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~ 114 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GS 114 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----Cc
Confidence 45566777999999999999984 455 9999986543 35668999999999999999999984322 15
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC-ceeccCCCCCeeecCCCC-cEEEEecCC
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG-VCHRDVKPQNLLVDPLTH-QVKLCDFGS 183 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~-ivH~dlkp~Nill~~~~~-~~kl~Dfg~ 183 (376)
++|||||+++ +|..++... ....++...+..++.||+.||+|||+ ++ ||||||||+|||++. ++ .+||+|||+
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~-~~~~~KI~DFGl 190 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDL-KGKTLKIADFGL 190 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcC-CCCEEEECCCcc
Confidence 8899999995 666666543 46789999999999999999999999 79 999999999999997 65 899999999
Q ss_pred ccccccC-CCcceeeccccccChhhhhC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 184 AKVLVKG-EANISYICSRYYRAPELIFG-ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 184 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
++..... .......||+.|||||++.+ ...|+.++||||||+++|||+||..||.+.........+.....+|.
T Consensus 191 sr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~---- 266 (362)
T KOG0192|consen 191 SREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP---- 266 (362)
T ss_pred ceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC----
Confidence 9877654 33444789999999999974 24599999999999999999999999999888555555544322222
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
++...++.+..++.+||..||.+||+..+++
T Consensus 267 -----------------------~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~ 297 (362)
T KOG0192|consen 267 -----------------------IPKECPPHLSSLMERCWLVDPSRRPSFLEIV 297 (362)
T ss_pred -----------------------CCccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence 3345789999999999999999999998775
No 100
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.1e-45 Score=342.13 Aligned_cols=258 Identities=28% Similarity=0.439 Sum_probs=208.1
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
...++|++.+.||+|+||.||+|++..+++.+|+|++.... ....+|+.+++.++||||+++++++ .+
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~ 114 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QD 114 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----Ec
Confidence 34578999999999999999999999999999999985421 2234688999999999999999988 55
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
+.++|+|||||+| +|...+.. ..+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~-~~~ikL~DfG 187 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDK-SGHLKLADFG 187 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECC-CCCEEEEeCC
Confidence 5669999999985 66655543 458899999999999999999999 79999999999999996 7889999999
Q ss_pred CccccccCCC--cceeeccccccChhhhhCCC---CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 183 SAKVLVKGEA--NISYICSRYYRAPELIFGAT---EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 183 ~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~---~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
++........ .....||+.|+|||++.+.. .++.++|+|||||++|+|++|..||.+.+.......+.......
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~- 266 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL- 266 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc-
Confidence 9976543322 23567899999999986532 37889999999999999999999999887766666554421110
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCC--CCCHHHHhCCCccccccC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELRE 325 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~~~~~~~ 325 (376)
.++ ....++.+++++|.+||..++.+ |++++++++||||++..+
T Consensus 267 --------------~~~----------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~ 312 (371)
T cd05622 267 --------------TFP----------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW 312 (371)
T ss_pred --------------cCC----------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence 011 11357999999999999854443 789999999999987544
No 101
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.6e-45 Score=339.24 Aligned_cols=247 Identities=29% Similarity=0.487 Sum_probs=201.6
Q ss_pred eeeeccCCceEEEEEEEc---CCCcEEEEEEecccc--------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 39 ERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~--------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++.||+|+||.||+|++. .+++.||+|++.... .....|+.+++.++||||+++++++ ..+..+
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeE
Confidence 368999999999999874 468899999986421 1234689999999999999999988 445568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+||||+++ +|...+.. ...+++..+..++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||+++.
T Consensus 76 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 149 (323)
T cd05584 76 YLILEYLSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDA-QGHVKLTDFGLCKE 149 (323)
T ss_pred EEEEeCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCCEEEeeCcCCee
Confidence 999999996 55555543 4668899999999999999999999 79999999999999996 78899999999875
Q ss_pred cccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... .......|++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+.......+....
T Consensus 150 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~------------ 216 (323)
T cd05584 150 SIHEGTVTHTFCGTIEYMAPEILMRS-GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK------------ 216 (323)
T ss_pred cccCCCcccccCCCccccChhhccCC-CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------------
Confidence 4322 223345689999999998764 47899999999999999999999999887766555544310
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
..++..+++++.++|.+||++||++|+ +++++++||||+...+.
T Consensus 217 -----------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~ 265 (323)
T cd05584 217 -----------------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWD 265 (323)
T ss_pred -----------------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 013345789999999999999999999 89999999999876553
No 102
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.1e-45 Score=337.33 Aligned_cols=246 Identities=29% Similarity=0.492 Sum_probs=198.9
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHh-CCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRL-MDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~-l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+|+.||+|.+.... .....|..++.. ++||||+++++++ .+..++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999986432 122346666654 5899999999988 5556799999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
|||.+ +|...+.. +..+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||+++....
T Consensus 76 E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05620 76 EFLNGGDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDR-DGHIKIADFGMCKENVFG 149 (316)
T ss_pred CCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECC-CCCEEeCccCCCeecccC
Confidence 99986 55555543 4678999999999999999999999 79999999999999996 77899999999875322
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........|++.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~-------------- 212 (316)
T cd05620 150 DNRASTFCGTPDYIAPEILQGL-KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--T-------------- 212 (316)
T ss_pred CCceeccCCCcCccCHHHHcCC-CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--C--------------
Confidence 2223356689999999999765 4899999999999999999999999887766555443221 0
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH-HHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-LEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~ell~hp~~~~~~~~ 326 (376)
..++..++.+++++|.+||+.||++|+++ +++++||||+...+.
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~ 257 (316)
T cd05620 213 -------------PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWT 257 (316)
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHH
Confidence 01233478899999999999999999998 588999999887653
No 103
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.4e-45 Score=337.35 Aligned_cols=307 Identities=35% Similarity=0.656 Sum_probs=237.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|.+.+.||.|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++.... .....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCceE
Confidence 68999999999999999999999999999999986532 12346899999999999999998774433 345568
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||+.++|...+.. ...+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.+||+|||++...
T Consensus 84 ~lv~e~~~~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~-~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLMESDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNE-DCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhhhhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCcEEecccccceee
Confidence 89999999877666543 4569999999999999999999999 79999999999999996 888999999998765
Q ss_pred ccCCC-----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGEA-----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
..... .....++..|+|||.+.+...++.++|+||+||++|+|++|+.||.+.+....+..+....|.++...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~ 237 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN 237 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence 33221 1234678899999998665558999999999999999999999999988888888888888888776654
Q ss_pred hcCcCCcCc---cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCCCCCCCC
Q 017139 263 CMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPL 339 (376)
Q Consensus 263 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~~~~~~~ 339 (376)
......... .++.....++.. +....+.++.++|.+||+.||++|||+++++.||||.+...+.... ...+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~----~~~~~ 312 (334)
T cd07855 238 RIGSDRVRKYIQNLPRKQPVPWSK-IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEP----TCPPP 312 (334)
T ss_pred hhchhhHHHHHhhcccCCCCCHHH-HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcccc----cCCCC
Confidence 322111000 112222222222 2235789999999999999999999999999999999877664332 12344
Q ss_pred CCchhhhhcCCHH
Q 017139 340 FNFKQELAGASPE 352 (376)
Q Consensus 340 ~~~~~~~~~~~~~ 352 (376)
++++-+....+.+
T Consensus 313 ~~~~~~~~~~~~~ 325 (334)
T cd07855 313 FDFDFEAIELSRE 325 (334)
T ss_pred CCCChhhhhcChh
Confidence 5555444333333
No 104
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.8e-45 Score=339.55 Aligned_cols=247 Identities=25% Similarity=0.471 Sum_probs=196.9
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+++.||+|++.+.. ....+|..+++.+ +||||+++++++ .+...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 47999999999999999999999999986532 1234688888888 799999999988 4555689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc-c
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV-K 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~-~ 189 (376)
|||+| +|...+.. ...+++..++.++.||+.||.|||+ +|++||||||+||+++. ++.+||+|||++.... .
T Consensus 76 e~~~~g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~~~~~ 149 (329)
T cd05588 76 EFVSGGDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDA-EGHIKLTDYGMCKEGIRP 149 (329)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECC-CCCEEECcCccccccccC
Confidence 99986 55444433 4679999999999999999999999 79999999999999996 7889999999987532 2
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHhcCCCCHHHH
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA--------VDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~ 261 (376)
........||+.|+|||++.+. .++.++|+|||||++|+|++|..||..... .+.+.+.+..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--------- 219 (329)
T cd05588 150 GDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--------- 219 (329)
T ss_pred CCccccccCCccccCHHHHcCC-CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc---------
Confidence 2333456789999999999764 489999999999999999999999963211 1111111110
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC------HHHHhCCCccccccCC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELREP 326 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~~~~~~~~ 326 (376)
.. ..++..++.++.++|.+||++||.+|++ ++++++||||..+.+.
T Consensus 220 -------~~------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~ 271 (329)
T cd05588 220 -------KQ------------IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWD 271 (329)
T ss_pred -------CC------------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence 00 0133457899999999999999999987 7899999999887654
No 105
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.2e-44 Score=325.90 Aligned_cols=277 Identities=34% Similarity=0.644 Sum_probs=215.0
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++ .....+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF-----RRKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE-----eeCCEE
Confidence 47999999999999999999999999999999885432 2234699999999999999999988 445568
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++||||++++++..+.. ....+++..++.++.|++.||.|||+ .|++|+||||+||+++. ++.++|+|||++...
T Consensus 76 ~~v~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 150 (286)
T cd07847 76 HLVFEYCDHTVLNELEK---NPRGVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITK-QGQIKLCDFGFARIL 150 (286)
T ss_pred EEEEeccCccHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcC-CCcEEECccccceec
Confidence 99999999876555433 34568999999999999999999999 79999999999999996 778999999999876
Q ss_pred ccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ......++..|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+....+....+............
T Consensus 151 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07847 151 TGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST 230 (286)
T ss_pred CCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc
Confidence 5433 223455788999999987655578999999999999999999999998887777776666555443322111110
Q ss_pred C--CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 N--YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. +.....+..............++..+.+||.+||+.||++|||+.+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 231 NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 01111111111111111223578999999999999999999999999999998
No 106
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.5e-45 Score=336.79 Aligned_cols=246 Identities=31% Similarity=0.499 Sum_probs=198.6
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHh-CCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRL-MDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~-l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+++.||+|++..... ....|..++.. .+||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 479999999999999999999999999865321 12235555554 4899999999888 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||++| +|...+.. ...+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.+||+|||++......
T Consensus 76 e~~~gg~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~-~~~~kL~Dfg~a~~~~~~ 149 (316)
T cd05592 76 EYLNGGDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDK-DGHIKIADFGMCKENMNG 149 (316)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECC-CCCEEEccCcCCeECCCC
Confidence 99986 55555443 4579999999999999999999999 79999999999999996 788999999998754332
Q ss_pred -CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 191 -EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 191 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
.......||+.|+|||.+.+.. ++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------------- 212 (316)
T cd05592 150 EGKASTFCGTPDYIAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR---------------- 212 (316)
T ss_pred CCccccccCCccccCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------------
Confidence 2333557899999999997654 8999999999999999999999999887766555443210
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH-HHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-LEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~ell~hp~~~~~~~~ 326 (376)
..++..++.++.++|.+||..||++|+++ .++++||||..+.+.
T Consensus 213 -------------~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05592 213 -------------PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWE 257 (316)
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHH
Confidence 01334578899999999999999999986 588899999987653
No 107
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8.1e-45 Score=330.04 Aligned_cols=280 Identities=34% Similarity=0.609 Sum_probs=225.0
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.++|++.+.||.|+||.||+|.+..+++.+|+|.+..... ...+|+.+++.++||||+++++++... +...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCc
Confidence 4679999999999999999999999999999998854321 224699999999999999999987542 2256
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+|+||||++++|...+... ...+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|||++..
T Consensus 81 ~~lv~e~~~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~-~~~~~l~d~g~~~~ 155 (293)
T cd07843 81 IYMVMEYVEHDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNN-RGILKICDFGLARE 155 (293)
T ss_pred EEEEehhcCcCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECC-CCcEEEeecCceee
Confidence 8999999998887776542 2368999999999999999999999 79999999999999996 78899999999887
Q ss_pred cccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... .......+++.|+|||.+.+...++.++|+||+|+++|+|++|.+||......+....+....+.+....+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 156 YGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred ccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 6544 223345578889999998765557899999999999999999999999998888888888888877776655332
Q ss_pred c--CCcCccCCCCCCCCcccccccC-CChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 266 P--NYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. ..............+...++.. +++.+.++|++||+.||++|||+.|++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 1 1111111112222233334444 68899999999999999999999999999998
No 108
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.1e-44 Score=327.85 Aligned_cols=276 Identities=41% Similarity=0.745 Sum_probs=225.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||.|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++ .....+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence 5899999999999999999999999999999986543 2344789999999999999999988 4455689
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+||||+.++|.+.+... ...+++..++.++.||+.||+|||+ .|++|+||+|+||+++. ++.++|+|||.+....
T Consensus 76 ~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~-~~~~~l~dfg~~~~~~ 150 (286)
T cd07832 76 LVMEYMPSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISA-DGVLKIADFGLARLFS 150 (286)
T ss_pred EEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcC-CCcEEEeeeeeccccc
Confidence 99999977887776542 3669999999999999999999999 79999999999999996 7889999999988665
Q ss_pred cCCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 189 KGEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 189 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... .....++..|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+....+..+....+.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 151 EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred CCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence 4332 33456788999999987665578999999999999999999999999888888888888888887766554321
Q ss_pred --CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 267 --NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 267 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
.+....++.....++... ....+.++.++|.+||..||++|||++++++||||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEI-FPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred cchhhcccCCCCCcchHHHh-CCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 122222232222223222 235678999999999999999999999999999984
No 109
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.6e-44 Score=326.12 Aligned_cols=275 Identities=36% Similarity=0.640 Sum_probs=217.9
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCC-CCCeeecceeeeecCCCCceeEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
|++.+.||+|+||.||+|.+..+++.+|+|++..... ...+|+.+++++. |+||+++++++.+. ....+++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 7889999999999999999999999999998865321 1235778888885 99999999988532 2245899
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
||||+++++.+.+... ...+++..++.++.|++.||+|||+ +|++|+||+|+||+++. +.+||+|||++.....
T Consensus 78 v~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~--~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 78 VFELMDMNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD--DILKLADFGSCRGIYS 151 (282)
T ss_pred EEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC--CCeEEEeccccccccc
Confidence 9999999887776542 3568999999999999999999999 79999999999999995 7899999999987655
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC-C
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN-Y 268 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 268 (376)
........++..|+|||.+.....++.++|+||+||++|+|++|.+||.+.+..+....+....+.+........... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 152 KPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred CCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 444445567899999998765555789999999999999999999999999888888888887777766443222111 1
Q ss_pred cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 269 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..+.++......... ....++.++.++|.+||.+||++|||++++++||||
T Consensus 232 ~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 232 MNYNFPSKKGTGLRK-LLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccCcccccccHHH-HcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 112222211111111 123578999999999999999999999999999998
No 110
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.3e-45 Score=335.92 Aligned_cols=246 Identities=30% Similarity=0.509 Sum_probs=199.2
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHh-CCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRL-MDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~-l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|.+..+++.||+|++.... .....|..+++. ++||||+++++++ .+...+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF-----QTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999986532 122346666665 5899999999988 4445689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
||+++ +|...+.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||++.....
T Consensus 76 ey~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~~~~~ 149 (316)
T cd05619 76 EYLNGGDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDT-DGHIKIADFGMCKENMLG 149 (316)
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECC-CCCEEEccCCcceECCCC
Confidence 99985 66555543 3568999999999999999999999 79999999999999996 77899999999875322
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........||+.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+..+....+... .
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~-------------- 212 (316)
T cd05619 150 DAKTCTFCGTPDYIAPEILLGQ-KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--N-------------- 212 (316)
T ss_pred CCceeeecCCccccCHHHHcCC-CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--C--------------
Confidence 2233456789999999998765 4899999999999999999999999887766555443221 0
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHH-HHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL-EACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~-ell~hp~~~~~~~~ 326 (376)
..++..++.+++++|.+||+.||++|+++. ++++||||+.+.+.
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05619 213 -------------PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWS 257 (316)
T ss_pred -------------CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHH
Confidence 012234688999999999999999999996 89999999987654
No 111
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-46 Score=366.09 Aligned_cols=269 Identities=28% Similarity=0.472 Sum_probs=227.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
..++|.|+++||+|+||.|.+++++.+++.||+|++.+. ...+..|.++|-.-+.+=|+.++..| +++
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-----QD~ 147 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-----QDE 147 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh-----cCc
Confidence 347899999999999999999999999999999998763 23456789999888999999999988 888
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
.++|+||||++| +|..++..+ .++++..+++|+.+|+.||.-||++ |+|||||||+|||+|. .|.+||+|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~----~~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~-~GHikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKF----DRLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDK-SGHIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecc-cCcEeeccchh
Confidence 999999999995 777777664 3799999999999999999999995 9999999999999997 88899999999
Q ss_pred ccccccCCC--cceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 184 AKVLVKGEA--NISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 184 ~~~~~~~~~--~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
|-.+..++. ....+|||-|.+||++.. ...|++.+|+||+||++|||+.|..||+...-.+.+.+|+..-
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk---- 297 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK---- 297 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh----
Confidence 987765544 345689999999999853 2458999999999999999999999999998888888887631
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC---HHHHhCCCccccccCCCCCCCCCC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELREPNARLPNGR 334 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~~~~~~~~~~~~~~~~ 334 (376)
..+.||.. ..+|+++++||.++++ +|+.|.. ++++.+||||.++.|...+-..++
T Consensus 298 -----------~~l~FP~~----------~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP 355 (1317)
T KOG0612|consen 298 -----------ESLSFPDE----------TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPP 355 (1317)
T ss_pred -----------hhcCCCcc----------cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCC
Confidence 11222211 2489999999999998 8999998 999999999999999766544333
Q ss_pred CCC
Q 017139 335 PFP 337 (376)
Q Consensus 335 ~~~ 337 (376)
.+|
T Consensus 356 ~vP 358 (1317)
T KOG0612|consen 356 VVP 358 (1317)
T ss_pred CCC
Confidence 333
No 112
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2e-44 Score=327.65 Aligned_cols=283 Identities=35% Similarity=0.614 Sum_probs=221.6
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|++.+.||.|++|.||+|.+..+|+.||+|.+.... ....+|+++++.++||||+++++++ .+...+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV-----HSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEE-----ecCCeE
Confidence 57999999999999999999999999999999885432 2345799999999999999999998 444568
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||+++++...+... ....+++..++.++.||+.||+|||+ +|++|+||+|+||+++..++.+||+|||++...
T Consensus 77 ~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 77 YLVFEYLDLDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred EEEEecccccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 999999998877776542 22346888999999999999999999 799999999999999865678999999998765
Q ss_pred ccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||...+..+.+.++....+.+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 154 GIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 3322 122345688999999987655678999999999999999999999998888888888877777776555432111
Q ss_pred CCc-CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 267 NYT-DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 267 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
... ...++..... ........+++++.++|.+||+.||++||++.++++||||++++.
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 234 LPDYKSAFPKWPPK-DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred chhhhhhcccCCCC-CHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 000 0001110000 011123457889999999999999999999999999999987653
No 113
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.9e-46 Score=340.90 Aligned_cols=245 Identities=29% Similarity=0.467 Sum_probs=197.8
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHH-HHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNREL-QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~-~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||+||+|++..+|+.+|+|++..... ....|. .+++.++||||+++++.+ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 469999999999999999999999999864321 112233 356789999999999888 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
||++| +|...+. ....+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+++....
T Consensus 76 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~-~~~~kL~DfG~~~~~~~~ 149 (325)
T cd05604 76 DFVNGGELFFHLQ----RERSFPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDS-QGHVVLTDFGLCKEGIAQ 149 (325)
T ss_pred cCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECC-CCCEEEeecCCcccCCCC
Confidence 99996 5544443 34679999999999999999999999 79999999999999996 77899999999875432
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........|++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~---------------- 212 (325)
T cd05604 150 SDTTTTFCGTPEYLAPEVIRKQ-PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP---------------- 212 (325)
T ss_pred CCCcccccCChhhCCHHHHcCC-CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC----------------
Confidence 2233456789999999999765 48999999999999999999999999887666655544310
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH----HHHhCCCccccccC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELRE 325 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~~~~~~~ 325 (376)
..++...+.++.++|.+||+.||.+||++ .+++.||||....+
T Consensus 213 -------------~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 213 -------------LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW 259 (325)
T ss_pred -------------ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence 01223578899999999999999999986 58999999987654
No 114
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.3e-45 Score=336.46 Aligned_cols=260 Identities=26% Similarity=0.410 Sum_probs=208.0
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||++++..+++.+|+|++.+.. .....|+.++..++|+||+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 47999999999999999999999999999999985421 1234688899999999999999888 45556
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+.+ +|.+.+.. ....+++..++.++.||+.||+|||+ .||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~-~~~~kL~DfG~a~ 150 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDM-NGHIRLADFGSCL 150 (332)
T ss_pred EEEEEeccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECC-CCCEEEeecchhe
Confidence 8999999985 66666654 23568999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCC--cceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 186 VLVKGEA--NISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 186 ~~~~~~~--~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
....... .....||+.|+|||++.+ ...++.++|+|||||++|+|++|..||.+.+..+....+.....
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~----- 225 (332)
T cd05623 151 KLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE----- 225 (332)
T ss_pred ecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc-----
Confidence 5433222 223568999999999862 33478999999999999999999999998877766665543110
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCC--CCCHHHHhCCCccccccCCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELREPN 327 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~~~~~~~~~ 327 (376)
.+.++. ....+++++++||.+||+.++++ |++++++++||||..+++..
T Consensus 226 ----------~~~~p~---------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~~ 276 (332)
T cd05623 226 ----------RFQFPA---------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWDN 276 (332)
T ss_pred ----------cccCCC---------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHHH
Confidence 001110 11357899999999999776555 68999999999999877653
No 115
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7.6e-45 Score=334.61 Aligned_cols=251 Identities=29% Similarity=0.448 Sum_probs=204.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCC-CCCeeecceeeeecCCCCcee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
+|.+.+.||+|+||.||+|++..+|+.||+|++.+.. .....|..++..+. |++|+++++++ .+...
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 4788999999999999999999999999999986532 12335777887776 46777888877 44456
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||++| +|...+.. ...+++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~-~~~ikL~Dfg~~~ 149 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred EEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEEecccccc
Confidence 8999999985 55555443 4679999999999999999999999 79999999999999996 7789999999987
Q ss_pred ccccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...... ......||+.|+|||++.+. .++.++|+||+||++|+|++|..||.+.+.......+.....
T Consensus 150 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~---------- 218 (323)
T cd05615 150 EHMVDGVTTRTFCGTPDYIAPEIIAYQ-PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV---------- 218 (323)
T ss_pred ccCCCCccccCccCCccccCHHHHcCC-CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC----------
Confidence 543222 23345689999999999764 489999999999999999999999998877666665554110
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
.++..++.++.+++.+||+.||.+|++ .+++++||||+.+++.
T Consensus 219 -------------------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~ 266 (323)
T cd05615 219 -------------------SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWD 266 (323)
T ss_pred -------------------CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHH
Confidence 133457899999999999999999997 4789999999988653
No 116
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.4e-44 Score=327.71 Aligned_cols=281 Identities=36% Similarity=0.645 Sum_probs=222.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccc---------hHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY---------KNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|.+.+.||.|+||.||+|.+..+++.||+|.+...... ...|+++++.++|+||+++++++ .+..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF-----GHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee-----ecCC
Confidence 488999999999999999999999999999998654322 23688999999999999999998 4455
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+++||||+.++|.+.+... ...+++..++.++.||+.||.|||+ +|++|+||+|+||+++. ++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~-~~~~~l~dfg~~~ 150 (298)
T cd07841 76 NINLVFEFMETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIAS-DGVLKLADFGLAR 150 (298)
T ss_pred EEEEEEcccCCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcC-CCCEEEccceeee
Confidence 68999999977777776542 1369999999999999999999999 79999999999999996 7889999999997
Q ss_pred ccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
....... .....+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+..+....+.+....+...
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 151 SFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGV 230 (298)
T ss_pred eccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhc
Confidence 7654322 223456788999999866556789999999999999999999999988888888888777777766555432
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
...............+... .....+.++.++|.+||.+||++|||+.+++.||||++...+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~ 291 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQ-IFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291 (298)
T ss_pred ccccccccccccCCcchhh-hcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence 2111111111111111111 224568899999999999999999999999999999975444
No 117
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.3e-44 Score=325.69 Aligned_cols=277 Identities=35% Similarity=0.654 Sum_probs=217.5
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.++|++.+.||.|++|.||+|.+..+++.||+|.+.... ....+|+++++.++|+||+++++++ .++...
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeE
Confidence 467999999999999999999999999999999985432 2234699999999999999999988 455568
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||++++|.+.+... ...+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||+++..
T Consensus 79 ~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~ 153 (291)
T cd07844 79 TLVFEYLDTDLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISE-RGELKLADFGLARAK 153 (291)
T ss_pred EEEEecCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcC-CCCEEECcccccccc
Confidence 999999999887766542 3468999999999999999999999 79999999999999996 778999999998754
Q ss_pred ccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......++..|+|||.+.+...++.++|+||+||++|+|++|..||.+.. ..+.+..+.+..+.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 154 SVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred CCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 3221 11223467889999998765557899999999999999999999998765 566677777777777666554332
Q ss_pred cC--CcCccCCCCCCCCcccccccCCC--hhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 266 PN--YTDFRFPQIKAHPWHKVFHKRMP--PEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 266 ~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.. +.....+.....+....+ ..++ .++.++|.+||++||++|||+.++++||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hccccccccccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 21 111111111111111111 1344 889999999999999999999999999998
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-44 Score=349.14 Aligned_cols=262 Identities=24% Similarity=0.360 Sum_probs=214.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC---C
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS---K 102 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~---~ 102 (376)
..++|.+.+.||+|+||+||+|++..+|+.||||++.... ....+|+.++..++|+||+++++.+..... .
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 3468999999999999999999999999999999985432 223468889999999999998877643221 1
Q ss_pred CceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
....+++||||++ |+|.+.+.........+++..++.++.|++.||.|||+ +||+||||||+|||++. ++.+||+||
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~-~~~vkL~DF 187 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCS-NGLVKLGDF 187 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeC-CCCEEEEec
Confidence 2235789999998 47877777655556789999999999999999999999 79999999999999996 788999999
Q ss_pred CCccccccC---CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 182 GSAKVLVKG---EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 182 g~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
|+++..... .......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+.....
T Consensus 188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~-~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~---- 262 (496)
T PTZ00283 188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK-PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY---- 262 (496)
T ss_pred ccCeeccccccccccccccCCcceeCHHHhCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC----
Confidence 998765432 223346789999999999765 489999999999999999999999988776655554433100
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
..++..+++++.+++.+||+.||.+||++.++++|||++.+.
T Consensus 263 ------------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 263 ------------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred ------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 013346789999999999999999999999999999997653
No 119
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-44 Score=327.56 Aligned_cols=276 Identities=34% Similarity=0.636 Sum_probs=218.5
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||.|++|.||+|++..+++.||||.+..+. .....|++++++++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 4899999999999999999999999999999886432 2345799999999999999999988 4455689
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+||||++++|...+... ....+++..++.++.|++.||+|||+ .|++|+||+|+||+++. ++.+||+|||++....
T Consensus 76 ~v~e~~~~~l~~~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~-~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 76 LVFEFLHQDLKKFMDAS--PLSGIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINT-EGAIKLADFGLARAFG 151 (284)
T ss_pred EEeeccccCHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEEeeccchhhcc
Confidence 99999998877766542 24568999999999999999999999 79999999999999996 7889999999987654
Q ss_pred cCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.... .....++..|+|||.+.+...++.++|+|||||++|+|++|..||.+.+..+...++.+..+.+....+......
T Consensus 152 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred cCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence 3222 223446788999998876555788999999999999999999999998888888888888877765443321100
Q ss_pred C-cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 268 Y-TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. ....++......... ....++++++++|.+||+.||++|||++++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 232 PDYKPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 0 000111111111111 123578899999999999999999999999999998
No 120
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.5e-45 Score=344.08 Aligned_cols=280 Identities=23% Similarity=0.332 Sum_probs=212.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcC--CCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLE--TGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
..+|.+++.||.|+||.||+|.... +++.||+|.+... ....+|+++++.++||||+++++++ .....+|++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-KTPGREIDILKTISHRAIINLIHAY-----RWKSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-ccHHHHHHHHHhcCCCCccceeeeE-----eeCCEEEEE
Confidence 3579999999999999999997643 5678999988654 3445799999999999999999988 445568999
Q ss_pred eecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 111 MEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 111 ~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||++.++|...+. ....+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.++|+|||++......
T Consensus 165 ~e~~~~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~-~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 165 MPKYKCDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDE-PENAVLGDFGAACKLDAH 238 (392)
T ss_pred ehhcCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcC-CCCEEEccCccccccCcc
Confidence 9999998877773 24679999999999999999999999 79999999999999996 788999999998765433
Q ss_pred CC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCCHHHHhhc
Q 017139 191 EA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 191 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.. .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.. ....+..+++.++..+.+.....
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALD-PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred cccccccccccccCccCHhHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 22 2245689999999999765 48999999999999999999999997653 34556666666554332211000
Q ss_pred Cc----CCcCccCCCCCCCCcccc-cccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 265 NP----NYTDFRFPQIKAHPWHKV-FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 265 ~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.. .+..+............. ....++.++.++|.+||.+||++|||+.++|+||||++..+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 00 000000000000000011 11246788999999999999999999999999999986433
No 121
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.9e-45 Score=336.63 Aligned_cols=247 Identities=26% Similarity=0.482 Sum_probs=194.9
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+++.||+|++.+.. .....|..++..+ +||||+++++++ .....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 47999999999999999999999999986532 1233577777665 899999999988 4445689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
||+++ +|...+. ....+++..++.++.|++.||.|||+ +||+||||||+||+++. ++.+||+|||+++....
T Consensus 76 E~~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~-~~~~kL~DfG~~~~~~~~ 149 (329)
T cd05618 76 EYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKEGLRP 149 (329)
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECC-CCCEEEeeCCccccccCC
Confidence 99996 5544443 24679999999999999999999999 79999999999999996 78899999999875432
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHHhcCCCCHHHH
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN--------AVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~--------~~~~~~~~~~~~~~~~~~~~ 261 (376)
........||+.|+|||++.+. .++.++|+|||||++|+|++|..||.... ....+.+.+..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--------- 219 (329)
T cd05618 150 GDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--------- 219 (329)
T ss_pred CCccccccCCccccCHHHHcCC-CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc---------
Confidence 2223356789999999999765 48999999999999999999999995311 11111111110
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC------HHHHhCCCccccccCC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELREP 326 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~~~~~~~~ 326 (376)
. ...++..++.++.++|++||..||++|++ .+++++||||+.+++.
T Consensus 220 -------~------------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~ 271 (329)
T cd05618 220 -------K------------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 271 (329)
T ss_pred -------C------------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence 0 00134567899999999999999999998 5799999999987653
No 122
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.6e-45 Score=340.22 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=199.8
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
...++|.+.+.||+|+||.||+|++..+++.||||++.... ....+|+++++.++|+||+++++++ ..+.
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 145 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNG 145 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCC
Confidence 34578999999999999999999999999999999985432 2345799999999999999999988 5556
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|+|||||.++.+. . .....+..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 146 ~~~lv~e~~~~~~L~---~----~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~-~~~~kL~DfG~~~ 216 (353)
T PLN00034 146 EIQVLLEFMDGGSLE---G----THIADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINS-AKNVKIADFGVSR 216 (353)
T ss_pred eEEEEEecCCCCccc---c----cccCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcC-CCCEEEcccccce
Confidence 689999999975321 1 2345678888999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCC-CcceeeccccccChhhhhCC----CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 186 VLVKGE-ANISYICSRYYRAPELIFGA----TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 186 ~~~~~~-~~~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
...... ......|+..|+|||.+... ...+.++|||||||++|+|++|+.||......+....+.......
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~---- 292 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ---- 292 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC----
Confidence 654322 22345789999999987431 224568999999999999999999997433222111111110000
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
....+..++.++++||.+||+.||++|||+.|+++||||..-.
T Consensus 293 ---------------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 293 ---------------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred ---------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 0012235788999999999999999999999999999998753
No 123
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.6e-45 Score=338.59 Aligned_cols=247 Identities=28% Similarity=0.464 Sum_probs=202.7
Q ss_pred eeeeccCCceEEEEEEEc---CCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 39 ERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
++.||+|+||.||++++. .+|+.||+|++.... .....|+++++.++||||+++++++ .++..+|+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~l 75 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYL 75 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEE
Confidence 367999999999999873 578999999986432 2234689999999999999999988 44556899
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
||||+++ +|.+.+.. ...+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.+||+|||++....
T Consensus 76 v~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 76 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDE-EGHIKLTDFGLSKESI 149 (318)
T ss_pred EEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECC-CCcEEEeeccCCcccC
Confidence 9999985 66555543 4678999999999999999999999 79999999999999996 7789999999987654
Q ss_pred cC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.. .......|++.|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~-------------- 214 (318)
T cd05582 150 DHEKKAYSFCGTVEYMAPEVVNRR-GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK-------------- 214 (318)
T ss_pred CCCCceecccCChhhcCHHHHcCC-CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC--------------
Confidence 43 223356789999999998764 47899999999999999999999999887766665544310
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
. .++..+++++.++|++||+.||++||+ ++++++||||..+.+.
T Consensus 215 ---~------------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~ 263 (318)
T cd05582 215 ---L------------GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWN 263 (318)
T ss_pred ---C------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHH
Confidence 0 123457899999999999999999999 7789999999887554
No 124
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-44 Score=344.18 Aligned_cols=275 Identities=25% Similarity=0.347 Sum_probs=206.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
...|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+++++.++|+||+++++++. .....++|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--~~~~~E~~iL~~L~HpnIv~l~~~~~-----~~~~~~lv~e 240 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--ASSVHEARLLRRLSHPAVLALLDVRV-----VGGLTCLVLP 240 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--cCHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEEEEEEE
Confidence 4579999999999999999999999999999996432 23457999999999999999999873 3445889999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC
Q 017139 113 YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 192 (376)
Q Consensus 113 ~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~ 192 (376)
++.++|...+... ...+++..++.|+.|++.||.|||+ +||+||||||+|||++. ++.+||+|||+++.......
T Consensus 241 ~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~-~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 241 KYRSDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNG-PEDICLGDFGAACFARGSWS 315 (461)
T ss_pred ccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECC-CCCEEEcccCCceecccccc
Confidence 9999888777542 3469999999999999999999999 79999999999999996 77899999999876533221
Q ss_pred ---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCC-C------ChHHHHHHHHHhcCCCCHHH--
Q 017139 193 ---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG-E------NAVDQLVEIIKVLGTPTREE-- 260 (376)
Q Consensus 193 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~-~------~~~~~~~~~~~~~~~~~~~~-- 260 (376)
.....||+.|+|||++.+.. ++.++|||||||++|+|++|..|+.. . .....+.++++..+....+.
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 22356899999999997654 89999999999999999998765432 1 11244555555433221110
Q ss_pred ------HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 261 ------IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 261 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
.............+......|... ..++.++.+||.+||++||.+|||+.|+|+||||+.
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRY--YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhh--ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000000000001111111122221 146789999999999999999999999999999964
No 125
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.9e-44 Score=329.82 Aligned_cols=282 Identities=36% Similarity=0.619 Sum_probs=215.6
Q ss_pred ceEeeeeeccCCceEEEEEEEcC--CCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLE--TGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|.+.+.||+|+||.||+|.+.. +++.||+|.+.... ....+|+.+++.++||||+++++++.. ....
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE---HADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC---CCCc
Confidence 48999999999999999999988 89999999987632 233469999999999999999998843 2235
Q ss_pred eEEEEeecccchHHHHHHhhhhcC-CCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC---CCCcEEEEec
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMN-QRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP---LTHQVKLCDF 181 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~---~~~~~kl~Df 181 (376)
.+++||||+++++...+....... ..+++..++.++.|++.||.|||+ ++|+||||||+||+++. .++.+||+||
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 689999999998887776544333 378999999999999999999999 79999999999999984 2577999999
Q ss_pred CCccccccCCC----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH---------HHHHH
Q 017139 182 GSAKVLVKGEA----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV---------DQLVE 248 (376)
Q Consensus 182 g~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~---------~~~~~ 248 (376)
|++........ .....++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+.. ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99876543322 223456888999999877666899999999999999999999999765432 35566
Q ss_pred HHHhcCCCCHHHHhhcCcC--CcC----ccCCCCCCCCcccccc--cCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 249 IIKVLGTPTREEIRCMNPN--YTD----FRFPQIKAHPWHKVFH--KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
++..++.+....+...... +.. ..............+. ...+.++.+++.+||..||++|||+.++++||||
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 6666666665544321111 000 0000000011111111 2578899999999999999999999999999998
No 126
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-44 Score=360.53 Aligned_cols=266 Identities=27% Similarity=0.384 Sum_probs=214.5
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
+...++|.+.+.||.|+||+||+|++..+++.+|+|.+.... .....|+.+++.++||||++++++|.. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e~ 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---KA 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---cC
Confidence 456679999999999999999999999999999999886432 224469999999999999999998854 33
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC------CCceeccCCCCCeeecCC----
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV------PGVCHRDVKPQNLLVDPL---- 172 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~------~~ivH~dlkp~Nill~~~---- 172 (376)
...+|||||||++ +|...+.........+++..++.|+.||+.||.|||+. ++|+||||||+|||++..
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 4468899999985 78888776555557799999999999999999999983 139999999999999631
Q ss_pred ------------CCcEEEEecCCccccccCCCcceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 017139 173 ------------THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPG 239 (376)
Q Consensus 173 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~ 239 (376)
...+||+|||++.............||+.|+|||++.+. ..++.++||||||||+|+|++|..||..
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 235899999999876544444456789999999998643 3478999999999999999999999987
Q ss_pred CChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCc
Q 017139 240 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~ 319 (376)
.+....+...+..... + .....+.++.+||.+||.++|.+||++.++|.|||
T Consensus 246 ~~~~~qli~~lk~~p~-----------------l-----------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 246 ANNFSQLISELKRGPD-----------------L-----------PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred CCcHHHHHHHHhcCCC-----------------C-----------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 6655544433331100 0 01235889999999999999999999999999999
Q ss_pred cccccCC
Q 017139 320 FDELREP 326 (376)
Q Consensus 320 ~~~~~~~ 326 (376)
++.+..+
T Consensus 298 ik~i~~p 304 (1021)
T PTZ00266 298 IKNVGPP 304 (1021)
T ss_pred HhhcCCC
Confidence 9877544
No 127
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.1e-44 Score=326.42 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=198.9
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
||+|+||.||++.+..+|+.||+|.+.... .....|+++++.++||||+++++++ .++..+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 799999999999999999999999885421 1233589999999999999999888 5556689999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 193 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (376)
+| +|...+... ....+++..+..++.|++.||+|||+ .|++||||||+||+++. ++.++|+|||++.........
T Consensus 76 ~g~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~-~~~~~l~Dfg~~~~~~~~~~~ 151 (277)
T cd05607 76 NGGDLKYHIYNV--GERGLEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDD-QGNCRLSDLGLAVELKDGKTI 151 (277)
T ss_pred CCCCHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcC-CCCEEEeeceeeeecCCCcee
Confidence 85 555555432 23458899999999999999999999 79999999999999996 778999999998776544444
Q ss_pred ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccC
Q 017139 194 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 273 (376)
Q Consensus 194 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (376)
....++..|+|||++.+.. ++.++|+||+||++|+|++|..||.+.........+....-.. ...
T Consensus 152 ~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-------------~~~- 216 (277)
T cd05607 152 TQRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED-------------EVK- 216 (277)
T ss_pred eccCCCCCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc-------------ccc-
Confidence 4556899999999997655 8999999999999999999999997654322222221110000 000
Q ss_pred CCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH----HHHhCCCccccccCCC
Q 017139 274 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELREPN 327 (376)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~~~~~~~~~ 327 (376)
.....+++++.++|.+||++||.+||++ ++++.||||+.++++.
T Consensus 217 ----------~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~ 264 (277)
T cd05607 217 ----------FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPR 264 (277)
T ss_pred ----------cccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHH
Confidence 0112478899999999999999999999 6788999999877653
No 128
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-46 Score=330.42 Aligned_cols=264 Identities=27% Similarity=0.390 Sum_probs=221.2
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
.|...+.|+.-++||+|+||.||-+..+.||+.||.|.+.+.+. ....|..+|..++.++||.+-..|
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf----- 254 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF----- 254 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee-----
Confidence 45566789999999999999999999999999999998854432 233689999999999999998777
Q ss_pred CCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEe
Q 017139 102 KDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
+....+|+|+..|+|+ |.-.+-+ -.+..+++..++.++.+|+.||++||+ .+||+|||||+|||+|. .|.+.|+|
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn--~g~~gF~e~ra~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd-~GhvRISD 330 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYN--HGNPGFDEQRARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDD-HGHVRISD 330 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeec--cCCCCCchHHHHHHHHHHHhhHHHHHh-cceeeccCChhheeecc-CCCeEeec
Confidence 5555599999999975 3222222 234589999999999999999999999 79999999999999995 88899999
Q ss_pred cCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 181 FGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 181 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
+|+|............+||..|||||++.+.. |+...|+|||||++|+|+.|+.||..........++-++.-..
T Consensus 331 LGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~---- 405 (591)
T KOG0986|consen 331 LGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED---- 405 (591)
T ss_pred cceEEecCCCCccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc----
Confidence 99999988888888889999999999997765 9999999999999999999999998776554444443322211
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCCC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPN 327 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~~ 327 (376)
...+++++|++++++++.+|++||.+|.. ++++.+||||+.++|..
T Consensus 406 ---------------------~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~r 456 (591)
T KOG0986|consen 406 ---------------------PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRR 456 (591)
T ss_pred ---------------------hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhH
Confidence 12356789999999999999999999984 67999999999999864
No 129
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-45 Score=340.16 Aligned_cols=245 Identities=27% Similarity=0.487 Sum_probs=196.5
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEecccccc-------hHHHHHHHHhC---CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-------KNRELQLMRLM---DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-------~~~e~~~l~~l---~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
||+|+||+||+|++..+++.||+|++...... ...|..++... .||||+++++++ .+...+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 79999999999999999999999998643211 12355555544 699999999988 4555689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+.+ +|...+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~-~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 76 DYMSGGELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDA-TGHIALCDFGLSKANLTD 149 (330)
T ss_pred cCCCCChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECC-CCCEEEecCCcCcCCCCC
Confidence 99985 55555443 4679999999999999999999999 79999999999999996 778999999998754322
Q ss_pred -CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 191 -EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 191 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
.......||+.|+|||++.+...++.++|+|||||++|+|++|..||.+.+..+....+...
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~----------------- 212 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG----------------- 212 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 23345678999999999876555899999999999999999999999887766555444321
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC----CHHHHhCCCccccccC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC----TALEACAHPFFDELRE 325 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~----t~~ell~hp~~~~~~~ 325 (376)
...++ ...+++++.++|.+||..||.+|| +++++++||||....+
T Consensus 213 ~~~~~-----------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~ 261 (330)
T cd05586 213 KVRFP-----------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDW 261 (330)
T ss_pred CCCCC-----------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCH
Confidence 00111 123688999999999999999998 7999999999987654
No 130
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6.7e-45 Score=324.46 Aligned_cols=252 Identities=35% Similarity=0.587 Sum_probs=205.1
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccch------HHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
|++++.||+|+||+||+|++..+++.||+|++....... .+|+.+++.++||||+++++++.. ...+++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 899999999999999999999999999999997654222 248899999999999999999843 555889
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc-
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL- 187 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~- 187 (376)
||||+++ +|.+.+. ....+++..+..++.|++.||.+||+ +|++|+||||+||+++. ++.++|+|||.+...
T Consensus 76 v~~~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~-~~~~~l~Dfg~~~~~~ 149 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDE-NGEVKLIDFGSSVKLS 149 (260)
T ss_dssp EEEEETTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEEST-TSEEEESSGTTTEEST
T ss_pred ccccccccccccccc----cccccccccccccccccccccccccc-ccccccccccccccccc-cccccccccccccccc
Confidence 9999997 7777776 24678999999999999999999999 79999999999999995 888999999998763
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
..........++..|+|||++.....++.++|+||+|+++|+|++|..||......+....+.+...........
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 224 (260)
T PF00069_consen 150 ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ----- 224 (260)
T ss_dssp STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-----
Confidence 223334456779999999998734458999999999999999999999999875444444443332211111100
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.....++++.++|.+||+.||++|||+.++++||||
T Consensus 225 -----------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 225 -----------------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -----------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -----------------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 001123799999999999999999999999999998
No 131
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.9e-45 Score=334.95 Aligned_cols=260 Identities=26% Similarity=0.389 Sum_probs=207.7
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||++++..+++.||+|++.+.. .....|..++..++|+||+++++++ .+..+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 57999999999999999999999999999999986421 1234678899999999999999988 55567
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+.| +|...+.. ....+++..++.++.|++.||+|||+ +||+||||||+|||++. ++.+||+|||++.
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~---~~~~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~-~~~~kl~DfG~a~ 150 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDM-NGHIRLADFGSCL 150 (331)
T ss_pred EEEEEeCCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcC-CCCEEEEecccee
Confidence 9999999985 66666654 23568999999999999999999999 79999999999999996 7789999999987
Q ss_pred ccccCCCc--ceeeccccccChhhhhCC----CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 186 VLVKGEAN--ISYICSRYYRAPELIFGA----TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 186 ~~~~~~~~--~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
........ ....|++.|+|||++.+. ..++.++|+||+||++|+|++|..||.+.+..+....+.......
T Consensus 151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~--- 227 (331)
T cd05624 151 KMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF--- 227 (331)
T ss_pred eccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc---
Confidence 65433222 234689999999998642 347889999999999999999999998887766655544311100
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCC--CCCHHHHhCCCccccccCCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDELREPN 327 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~~~~~~~~~ 327 (376)
.++. ....++++++++|.+||+.++++ |++++++++||||+..++..
T Consensus 228 ------------~~p~---------~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~~ 276 (331)
T cd05624 228 ------------QFPS---------HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWEN 276 (331)
T ss_pred ------------cCCC---------ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHHH
Confidence 0110 11246899999999999976655 56899999999999877654
No 132
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.8e-44 Score=324.04 Aligned_cols=276 Identities=35% Similarity=0.667 Sum_probs=222.0
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
+|++.+.||.|++|.||+|++..+|+.||+|.+.... ....+|+.+++.++||||+++++++. +...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence 5899999999999999999999999999999886542 23346899999999999999999984 3445889
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
||||++++|.+.+.... ....+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~-~~~~~l~d~g~~~~~~~ 152 (284)
T cd07836 76 VFEYMDKDLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINK-RGELKLADFGLARAFGI 152 (284)
T ss_pred EEecCCccHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECC-CCcEEEeecchhhhhcC
Confidence 99999998877776532 23568999999999999999999999 79999999999999996 78899999999875533
Q ss_pred CC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 190 GE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 190 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
.. ......++..|++||.+.+...++.++|+|||||++|+|++|..||.+.+..+....+......+....+.... ..
T Consensus 153 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 231 (284)
T cd07836 153 PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS-QL 231 (284)
T ss_pred CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh-cC
Confidence 22 12234568889999998766567899999999999999999999999988888888888887777776655433 11
Q ss_pred cCc--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 269 TDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 269 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..+ .++......... +...++.++.++|.+||+.||++||++.++++||||
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQ-LFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred chhcccccCCChHHHHH-HhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 111 122221112211 223568899999999999999999999999999998
No 133
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.1e-44 Score=326.01 Aligned_cols=257 Identities=26% Similarity=0.406 Sum_probs=204.6
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .....|+.+++.++|++|+.+++.+ ..+..+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEE
Confidence 3788999999999999999999999999999885432 1234689999999999999998887 444568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+||||+.| +|...+... ....+++..+..++.|++.||.|||+ .||+||||||+||+++. ++.++|+|||++..
T Consensus 76 ~lv~e~~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDD-HGHIRISDLGLAVH 151 (285)
T ss_pred EEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECC-CCCEEEeeccceee
Confidence 999999985 665555432 23468999999999999999999999 79999999999999996 77899999999876
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
...........|+..|+|||++.+.. ++.++|+||+||++|+|++|..||..................
T Consensus 152 ~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~----------- 219 (285)
T cd05630 152 VPEGQTIKGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----------- 219 (285)
T ss_pred cCCCccccCCCCCccccChHHHcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-----------
Confidence 54443334457899999999997654 899999999999999999999999865432111111110000
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
....++..+++++.+|+.+||+.||++|+| ++++++||||+++.+.
T Consensus 220 --------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05630 220 --------------VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFK 270 (285)
T ss_pred --------------hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHH
Confidence 001133457889999999999999999999 9999999999876544
No 134
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.7e-44 Score=332.02 Aligned_cols=287 Identities=30% Similarity=0.543 Sum_probs=217.1
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCC-------
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTS------- 101 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~------- 101 (376)
..+|.+.+.||.|+||.||+|.+..+|+.||+|++.... ....+|+++++.++||||+++++++.....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999999999999999885432 234568999999999999999987643221
Q ss_pred --CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEE
Q 017139 102 --KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLC 179 (376)
Q Consensus 102 --~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~ 179 (376)
.+...+|+||||++++|.+.+.. ..+++..++.++.||+.||.|||+ .|++||||||+||+++..+..+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYMETDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeecccccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceEEEC
Confidence 11235789999999877665542 468999999999999999999999 7999999999999998657789999
Q ss_pred ecCCccccccCCC----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q 017139 180 DFGSAKVLVKGEA----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 255 (376)
Q Consensus 180 Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~ 255 (376)
|||.+........ .....++..|+|||.+.+...++.++|+|||||++|+|++|..||.+.+..+....+......
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999876432211 122356888999998766556889999999999999999999999988877777666665444
Q ss_pred CCHHHHhhcCcCCcCccC--CCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 256 PTREEIRCMNPNYTDFRF--PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.................. ......+... +...++.++.+||.+||+.||.+|||+++++.||||+.+..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~ 309 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRD-LLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCP 309 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHH-HccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCC
Confidence 333222211110000000 0001111111 223578899999999999999999999999999999876544
No 135
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.3e-45 Score=335.12 Aligned_cols=246 Identities=26% Similarity=0.429 Sum_probs=199.1
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chH-HHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKN-RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~-~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+++.||+|++..... ... ++..+++.++||||+++++++ .....+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 479999999999999999999999999864321 111 223456788999999999888 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
||+++ +|...+.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||+++....
T Consensus 76 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~-~~~~kl~DfG~a~~~~~~ 149 (325)
T cd05602 76 DYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDS-QGHIVLTDFGLCKENIEH 149 (325)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECC-CCCEEEccCCCCcccccC
Confidence 99996 55555543 4668899999999999999999999 79999999999999996 77899999999875432
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---------------- 212 (325)
T cd05602 150 NGTTSTFCGTPEYLAPEVLHKQ-PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP---------------- 212 (325)
T ss_pred CCCcccccCCccccCHHHHcCC-CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC----------------
Confidence 2233456789999999999764 48999999999999999999999999887766665554310
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHH----HHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL----EACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~----ell~hp~~~~~~~~ 326 (376)
..++..++..+.++|.+||+.||.+|+++. ++++|+||...++.
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~ 260 (325)
T cd05602 213 -------------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWD 260 (325)
T ss_pred -------------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHH
Confidence 002345789999999999999999999876 89999999877653
No 136
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=325.36 Aligned_cols=270 Identities=29% Similarity=0.454 Sum_probs=224.6
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchH-------HHHHHHHhC-CCCCeeecceeeeecCC
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLM-DHPNVISLKHCFFSTTS 101 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------~e~~~l~~l-~h~~Iv~~~~~~~~~~~ 101 (376)
-.+..+|.++.+||.|+||+|.+|..+.+.+.||||+++++..... .|..+|... +-|++++++.+|
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF----- 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF----- 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----
Confidence 3455689999999999999999999999999999999987654332 466676655 467899999998
Q ss_pred CCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEe
Q 017139 102 KDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
+.-..+|+||||+.|+ |--.+.+ -+.+.|..+..++.+|+-||-+||+ +||++||||.+||+++. ++.+||+|
T Consensus 420 QTmDRLyFVMEyvnGGDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~-eGHiKi~D 493 (683)
T KOG0696|consen 420 QTMDRLYFVMEYVNGGDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDS-EGHIKIAD 493 (683)
T ss_pred hhhhheeeEEEEecCchhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhc-CCeeeeeccccceEecc-CCceEeee
Confidence 4445599999999974 4333443 4678888999999999999999999 89999999999999997 78899999
Q ss_pred cCCccccccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 181 FGSAKVLVKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 181 fg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
||+++...-+ ....+.+|||.|+|||++.- +.|+.++|+||+||+||||+.|++||.+.+..+..+.|.+.
T Consensus 494 FGmcKEni~~~~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------- 565 (683)
T KOG0696|consen 494 FGMCKENIFDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------- 565 (683)
T ss_pred cccccccccCCcceeeecCCCcccccceEEe-cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc-------
Confidence 9999765433 44567899999999999964 45999999999999999999999999999999999988873
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH-----HHHhCCCccccccCCC-CCCCCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELREPN-ARLPNG 333 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~~~~~~~~~-~~~~~~ 333 (376)
...+|+.+|.++.++++..|.+.|.+|..+ .++..||||+.++|.. ++....
T Consensus 566 ----------------------nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiq 623 (683)
T KOG0696|consen 566 ----------------------NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQ 623 (683)
T ss_pred ----------------------cCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCC
Confidence 223667899999999999999999999864 5899999999999863 344445
Q ss_pred CCCCCCC
Q 017139 334 RPFPPLF 340 (376)
Q Consensus 334 ~~~~~~~ 340 (376)
+|+.|..
T Consensus 624 PPfkPk~ 630 (683)
T KOG0696|consen 624 PPFKPKI 630 (683)
T ss_pred CCCCCcc
Confidence 5666654
No 137
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.3e-44 Score=346.46 Aligned_cols=254 Identities=27% Similarity=0.355 Sum_probs=210.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCC-CcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLET-GETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
..|.+.+.||+|++|.||+|.+..+ ++.+|+|.+.... ....+|+.+++.++||||+++++++ .....+|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~-----~~~~~~~ 141 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDF-----KSDDKLL 141 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----EECCEEE
Confidence 4599999999999999999998877 7889999764432 2345699999999999999999998 4445689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||++| +|.+.+.........+++..+..++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||+++..
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~-~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMP-TGIIKLGDFGFSKQY 219 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECC-CCcEEEEeCcCceec
Confidence 99999984 7777776655556679999999999999999999999 79999999999999996 788999999999865
Q ss_pred ccCC---CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 188 VKGE---ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 188 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+......
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--------- 289 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERK-RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--------- 289 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCC-CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------
Confidence 4332 13345689999999998664 4899999999999999999999999887776655554431100
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
.++..++.++.++|.+||..||++||++++++.|||++..
T Consensus 290 -------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 290 -------------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred -------------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 1233578899999999999999999999999999999754
No 138
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.1e-44 Score=331.81 Aligned_cols=288 Identities=38% Similarity=0.686 Sum_probs=232.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||.|++|.||+|++..+++.||+|++.... ....+|+.+++.++|+||+++.+++..........+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5899999999999999999999999999999886532 2345799999999999999999988554323334689
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
++|||++++|.+.+.. ...+++..++.++.||+.||++||+ +||+|+||||+||+++. ++.++|+|||++....
T Consensus 81 lv~e~~~~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~-~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMETDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNS-NCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchhhhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEcccCceEeec
Confidence 9999999877666653 3479999999999999999999999 79999999999999996 7889999999998765
Q ss_pred cCC----CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 189 KGE----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 189 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
... ......+++.|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+..+....+....+.+..+.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 234 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI 234 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence 543 2334567889999999977646899999999999999999999999999999999999998888887665422
Q ss_pred CcC-CcCc--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCC
Q 017139 265 NPN-YTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 329 (376)
Q Consensus 265 ~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~ 329 (376)
... ...+ ..+.....++... ...++.++.++|.+||++||++|||++++++||||+++..+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~ 301 (330)
T cd07834 235 TSEKARNYLKSLPKKPKKPLSKL-FPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE 301 (330)
T ss_pred cccchhhHHhhcccCCcchhHHh-cccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence 111 1111 0111112222222 23478999999999999999999999999999999998776433
No 139
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.9e-45 Score=337.70 Aligned_cols=260 Identities=29% Similarity=0.438 Sum_probs=223.4
Q ss_pred CCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 28 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 28 ~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
..++..+.|.+.+.||+|.|++|.+|++..++..||||.+.+..- ...+|+++++.++|||||+++.+..+
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t--- 126 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET--- 126 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee---
Confidence 456778889999999999999999999999999999999876532 24589999999999999999999844
Q ss_pred CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 102 KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
...+|+||||+.++ .+..|...++++.+...+.++.|+++|++|||+ ++|+|||||++|||++. +.++||+||
T Consensus 127 --~~~lylV~eya~~g---e~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~-~mnikIaDf 199 (596)
T KOG0586|consen 127 --EATLYLVMEYASGG---ELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDE-NMNIKIADF 199 (596)
T ss_pred --cceeEEEEEeccCc---hhHHHHHhcccchhhhhhhhhHHHHHHHHHHhh-cceeccccchhhccccc-ccceeeecc
Confidence 44499999999964 344444457888889999999999999999999 89999999999999996 777999999
Q ss_pred CCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 182 GSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 182 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
|++..........+.+|++.|.|||++.+..+.++.+|+||+|+++|.|+.|..||.+.+-.+.....+.
T Consensus 200 gfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~---------- 269 (596)
T KOG0586|consen 200 GFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR---------- 269 (596)
T ss_pred ccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee----------
Confidence 9999998888888999999999999999888789999999999999999999999998765544433322
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
..+++| --++.++.++|+++|..+|.+|++.+++..|.|.......
T Consensus 270 -------gk~rIp------------~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 270 -------GKYRIP------------FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred -------eeeccc------------ceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 122222 2478999999999999999999999999999999876655
No 140
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.8e-45 Score=334.05 Aligned_cols=246 Identities=28% Similarity=0.438 Sum_probs=197.6
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHH-HHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRE-LQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e-~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+++.||+|++.+... ...+| ..+++.++||||+++++++ .+...+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 479999999999999999999999999854321 11223 3467889999999999888 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
|||+| +|...+. ....+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~~~~~ 149 (321)
T cd05603 76 DYVNGGELFFHLQ----RERCFLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDS-QGHVVLTDFGLCKEGVEP 149 (321)
T ss_pred cCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECC-CCCEEEccCCCCccCCCC
Confidence 99996 5544443 24678999999999999999999999 79999999999999996 78899999999875322
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........|++.|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+.......+... +
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~------------- 212 (321)
T cd05603 150 EETTSTFCGTPEYLAPEVLRKE-PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK---P------------- 212 (321)
T ss_pred CCccccccCCcccCCHHHhcCC-CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---C-------------
Confidence 2223345689999999998654 4899999999999999999999999888766555544321 0
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH----HHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~~~~~~~~ 326 (376)
..++...+.++.++|.+||+.||.+|+++ .++++||||..+++.
T Consensus 213 -------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 213 -------------LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred -------------CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 01234568899999999999999999976 499999999887654
No 141
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-46 Score=343.68 Aligned_cols=258 Identities=23% Similarity=0.367 Sum_probs=214.2
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.+-|.|+..||.|+||+||+|..+.++-..|.|++..... ...-|+++|..++||+||++++.|+..+. ++
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enk-----Lw 105 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENK-----LW 105 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCc-----eE
Confidence 3568999999999999999999998888888898743321 12258999999999999999999865554 89
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
|+.|||+|+-.+.+.- ..+..+++.+++.+++|+|.||.|||+ ++|+|||||..|||+.. +|.++|+|||.+....
T Consensus 106 iliEFC~GGAVDaiml--EL~r~LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~Tl-dGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIML--ELGRVLTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTL-DGDIRLADFGVSAKNK 181 (1187)
T ss_pred EEEeecCCchHhHHHH--HhccccchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEe-cCcEeeecccccccch
Confidence 9999999875544432 346889999999999999999999999 79999999999999996 8889999999864432
Q ss_pred -cCCCcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 189 -KGEANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 189 -~~~~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
......+++|||+|||||+..+ ...|+.++||||||++|.+|+.+.+|-...+....+..+.+.
T Consensus 182 ~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS----------- 250 (1187)
T KOG0579|consen 182 STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----------- 250 (1187)
T ss_pred hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc-----------
Confidence 2344568999999999999743 345999999999999999999999999888888777766552
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.|.....|.+.+..+.||+++||.+||..||+++++|+||||++...
T Consensus 251 ---------------ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 251 ---------------EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred ---------------CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 11222245567899999999999999999999999999999986543
No 142
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.3e-44 Score=331.94 Aligned_cols=247 Identities=25% Similarity=0.448 Sum_probs=196.9
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..+++.||+|++.... ....+|..++..+ .||||+.+++++ .+...+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999996532 1234677888777 699999999988 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc-
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK- 189 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~- 189 (376)
|||+| +|...+.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++.....
T Consensus 76 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~-~~~~kl~Dfg~~~~~~~~ 149 (327)
T cd05617 76 EYVNGGDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDA-DGHIKLTDYGMCKEGLGP 149 (327)
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeC-CCCEEEeccccceeccCC
Confidence 99986 55544443 4579999999999999999999999 79999999999999996 77899999999875322
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhcCCCCHHHHhh
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN------AVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
........||+.|+|||++.+. .++.++|+|||||++|+|++|..||.... ..+...+....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~----------- 217 (327)
T cd05617 150 GDTTSTFCGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE----------- 217 (327)
T ss_pred CCceecccCCcccCCHHHHCCC-CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh-----------
Confidence 2233456789999999999765 48999999999999999999999996421 11222222110
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC------HHHHhCCCccccccCC
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELREP 326 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~~~~~~~~ 326 (376)
.. ..++..++..+.++|.+||..||++|++ .+++++||||+.+++.
T Consensus 218 -----~~------------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~ 269 (327)
T cd05617 218 -----KP------------IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWD 269 (327)
T ss_pred -----CC------------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence 00 0133457899999999999999999998 4699999999988765
No 143
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.5e-43 Score=324.05 Aligned_cols=285 Identities=29% Similarity=0.510 Sum_probs=217.2
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCC---
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTS--- 101 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~--- 101 (376)
...++|.+.+.||+|+||.||+|.+..+++.||+|.+..... ...+|+.+++.++||||+++++++.....
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 456789999999999999999999999999999998854321 22468999999999999999998754321
Q ss_pred CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 102 KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
......++||||+.+++...+.. ....+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~df 163 (310)
T cd07865 89 RYKGSFYLVFEFCEHDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITK-DGILKLADF 163 (310)
T ss_pred CCCceEEEEEcCCCcCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECC-CCcEEECcC
Confidence 22345789999999987777654 23468999999999999999999999 79999999999999996 788999999
Q ss_pred CCccccccCCC-----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 017139 182 GSAKVLVKGEA-----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 256 (376)
Q Consensus 182 g~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 256 (376)
|++........ .....++..|+|||.+.+...++.++|+||+|+++|+|++|.+||.+.+.......+....+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99876543221 1234567889999998765557889999999999999999999999888777777777766655
Q ss_pred CHHHHhhcCc--CCcCccCCCCCCCCccccc-ccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 257 TREEIRCMNP--NYTDFRFPQIKAHPWHKVF-HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 257 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
+.+.++.... .+....++..........+ +...+..+.++|.+||..||.+|||++++++||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 5443322110 0011111111110111111 11246788999999999999999999999999998
No 144
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-46 Score=324.12 Aligned_cols=281 Identities=28% Similarity=0.513 Sum_probs=219.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccc---hHHHHHHHHhCCC--C----CeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY---KNRELQLMRLMDH--P----NVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~~~e~~~l~~l~h--~----~Iv~~~~~~~~~~~~~ 103 (376)
..+|.+++.||+|.||+|-.+.+..++..||||+++.-.++ ..-|+++|..+.+ | -++.+.++| +-
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-----dy 162 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-----DY 162 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----hc
Confidence 57899999999999999999999999999999998654333 3458899998842 2 266666767 66
Q ss_pred ceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC------------
Q 017139 104 ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP------------ 171 (376)
Q Consensus 104 ~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~------------ 171 (376)
.+..|||+|.++.++.+.+.... ..+++...++.|..|++.++++||+ .+++|.||||+|||+.+
T Consensus 163 rghiCivfellG~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh~-~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 163 RGHICIVFELLGLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLHD-LKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred cCceEEEEeccChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHHh-cceeecCCChheEEEeccceEEEeccCCc
Confidence 77799999999989999888643 4678999999999999999999999 69999999999999832
Q ss_pred -------CCCcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 017139 172 -------LTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD 244 (376)
Q Consensus 172 -------~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~ 244 (376)
.+..|+|+|||.|+... ....+.+.|..|+|||++++-+ ++.++||||+||||+|+.+|...|+.+++.+
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~--e~hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDH--EHHSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred cceeccCCCcceEEEecCCcceec--cCcceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 13369999999998643 3346778899999999999865 9999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHhhcC-c--------CCcCccCCC----CC--CCCcccccc--cCCChhHHHHHHhhcCCCCCC
Q 017139 245 QLVEIIKVLGTPTREEIRCMN-P--------NYTDFRFPQ----IK--AHPWHKVFH--KRMPPEAIDLASRLLQYSPSL 307 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~----~~--~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~ 307 (376)
.+.-+..++|..+...+.... . .|.+..-.. .. ..+...... +..-.++.|||++||.+||.+
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 998888888977665554331 0 011100000 00 001111110 011235889999999999999
Q ss_pred CCCHHHHhCCCcccccc
Q 017139 308 RCTALEACAHPFFDELR 324 (376)
Q Consensus 308 R~t~~ell~hp~~~~~~ 324 (376)
|+|+.|+|.||||+.+.
T Consensus 397 RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 397 RITLREALSHPFFARLT 413 (415)
T ss_pred cccHHHHhcCHHhhcCC
Confidence 99999999999998753
No 145
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.4e-43 Score=320.10 Aligned_cols=277 Identities=35% Similarity=0.608 Sum_probs=212.1
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.++|++.+.||+|+||.||+|.+..+|+.||+|.+.... ....+|+.+++.++|+||+++++++ .+....
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~~ 78 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKETL 78 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCeE
Confidence 467999999999999999999999999999999985432 1235799999999999999999988 444568
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||+.+++...+.. ....+++..++.++.|++.||.|||+ +||+|+||||+||+++. ++.++|+|||+++..
T Consensus 79 ~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 79 TFVFEYMHTDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISY-LGELKLADFGLARAK 153 (291)
T ss_pred EEEEecccCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcC-CCcEEEecccccccc
Confidence 89999999887766543 23457888899999999999999999 79999999999999996 788999999998754
Q ss_pred ccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......+++.|+|||.+.+...++.++|+|||||++|+|++|..||.+.+ ..+.+..+....+.+....+....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 3222 22334568899999998765557889999999999999999999997654 345666666666766655433221
Q ss_pred --cCCcCccCCCCCCCCccccccc--CCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 266 --PNYTDFRFPQIKAHPWHKVFHK--RMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
+.+.....+......... .+. ..+.++.+++.+||..||++|||+.+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRV-VWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hcccccchhccccCCcchhh-hccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 111111111100000111 111 236789999999999999999999999999998
No 146
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.4e-43 Score=328.86 Aligned_cols=316 Identities=34% Similarity=0.611 Sum_probs=237.6
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~~ 104 (376)
..++|.+.+.||+|++|.||+|++..+++.||+|++.... ....+|+.+++.++||||+++.+++..... ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3467999999999999999999999999999999885421 223368999999999999999887743222 223
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+++|+||++++|.+.+.. ..+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~-~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNE-DCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCCEEEcccccc
Confidence 45889999998888777653 569999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...... .....++..|+|||.+.+...++.++|+|||||++|+|++|..||.+.+..+.+..+....+.+....+...
T Consensus 166 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (343)
T cd07851 166 RHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKI 243 (343)
T ss_pred cccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Confidence 765332 234567889999999876555789999999999999999999999998888888888888777776554433
Q ss_pred CcCCc-Cc--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCCCCCCCCCC
Q 017139 265 NPNYT-DF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFN 341 (376)
Q Consensus 265 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~ 341 (376)
..... .+ ..+......+.. ....+++++.++|.+||+.||++|||+.++++||||+++..+... +..+.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~-----~~~~~~~ 317 (343)
T cd07851 244 SSESARNYIQSLPQMPKKDFKE-VFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDE-----PVAPPYD 317 (343)
T ss_pred cchhHHHHHHhccccCCCCHHH-HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCccc-----ccccccC
Confidence 21100 00 011111111111 123468999999999999999999999999999999987655321 2233333
Q ss_pred chhhhhcCCHHHHhhhcHHHH
Q 017139 342 FKQELAGASPELINRLIPEHV 362 (376)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~ 362 (376)
..-.-.+.....+..++..++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~ 338 (343)
T cd07851 318 QSFESRDLTVDEWKELVYKEI 338 (343)
T ss_pred cchhhhhcCHHHHHHHhHHHH
Confidence 332333345555555555443
No 147
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.1e-44 Score=331.05 Aligned_cols=278 Identities=26% Similarity=0.420 Sum_probs=204.4
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.++|++.+.||.|+||.||+|.+..++..+|+|.+.... ....+|+++++.++||||+++++++. ++..+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-----ECCEE
Confidence 468999999999999999999999999999999886542 23457999999999999999999984 44568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+||||+.+ +|.+.+.. ...+++..+..++.|++.||.|||+..+++|+||||+|||++. ++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~ 153 (333)
T cd06650 79 SICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQ 153 (333)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC-CCCEEEeeCCcchh
Confidence 999999985 66666653 4568999999999999999999997237999999999999986 77899999999875
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh--cCCCCHHHHhhc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV--LGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 264 (376)
.... ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||......+.. .+... .+.+........
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 154 LIDS-MANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAESETSPR 230 (333)
T ss_pred hhhh-ccccCCCCccccCHHHhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCccccccCcc
Confidence 5332 22345688999999999764 4899999999999999999999999876543322 11110 011100000000
Q ss_pred CcC-------CcCccCC---------CCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 265 NPN-------YTDFRFP---------QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 265 ~~~-------~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
... +.....+ ..............++.++++||.+||++||++|||+.+++.||||+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 000 0000000 0000000000112367889999999999999999999999999999864
No 148
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.2e-44 Score=330.67 Aligned_cols=289 Identities=34% Similarity=0.674 Sum_probs=228.1
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
+...++|++.+.||+|+||.||+|.+..+++.+|+|++.... ....+|+.+++.+ +||||+++++++.. .
T Consensus 3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~ 79 (337)
T cd07852 3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---E 79 (337)
T ss_pred chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---C
Confidence 356678999999999999999999999899999999885421 2234699999999 99999999998733 2
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
+...+|+||||++++|...+.. ..+++..++.++.|++.||.|||+ +||+|+||+|+||+++. ++.+||+|||
T Consensus 80 ~~~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~-~~~~kl~d~g 152 (337)
T cd07852 80 NDKDIYLVFEYMETDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNS-DCRVKLADFG 152 (337)
T ss_pred CCceEEEEecccccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCcEEEeecc
Confidence 3445889999999887766653 267888999999999999999999 79999999999999996 7889999999
Q ss_pred CccccccCC------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 017139 183 SAKVLVKGE------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 256 (376)
Q Consensus 183 ~~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 256 (376)
.+....... ......++..|+|||.+.+...++.++|+|||||++|+|++|+.||.+....+....+....+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 232 (337)
T cd07852 153 LARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP 232 (337)
T ss_pred chhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 987654322 12234678899999988665567899999999999999999999999988888888888888777
Q ss_pred CHHHHhhcCcCCcCcc---CCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCC
Q 017139 257 TREEIRCMNPNYTDFR---FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 329 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~ 329 (376)
..+.+..+........ .+..........+ ..++.++.++|.+||+.||++|||+.++++||||+.+..+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~ 307 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELL-PKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDE 307 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhc-cCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCC
Confidence 7665543322111111 1111111222222 2378999999999999999999999999999999998665433
No 149
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.4e-44 Score=321.30 Aligned_cols=258 Identities=26% Similarity=0.399 Sum_probs=204.6
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHH-HHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQ-LMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~-~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|++.+.||+|+||.||+|.+..+|+.||+|.+..... ....|.. .++.++||||+++++++. .+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence 479999999999999999999999999999998865421 1123444 467779999999999884 34458
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCC-CceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP-GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~-~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|++|||++++|.+.+.........+++..++.++.|++.||+|||+ + +++||||||+||+++. ++.+||+|||++..
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~i~h~dlkp~nil~~~-~~~~kl~dfg~~~~ 153 (283)
T cd06617 76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS-KLSVIHRDVKPSNVLINR-NGQVKLCDFGISGY 153 (283)
T ss_pred EEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh-cCCeecCCCCHHHEEECC-CCCEEEeecccccc
Confidence 9999999998888877655555789999999999999999999998 6 9999999999999996 78899999999876
Q ss_pred cccCCCcceeeccccccChhhhhCC---CCCCccchhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCHHHHh
Q 017139 187 LVKGEANISYICSRYYRAPELIFGA---TEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~ 262 (376)
...........++..|+|||.+.+. ..++.++|+|||||++|+|++|..||.... ..+.+........ .
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~----- 226 (283)
T cd06617 154 LVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS--P----- 226 (283)
T ss_pred cccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC--C-----
Confidence 5443333345678889999988542 236889999999999999999999996532 2333333222100 0
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.+ ....+|.++.++|.+||..||++||++++++.||||.....
T Consensus 227 ---------~~-----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 227 ---------QL-----------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred ---------CC-----------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence 00 11246889999999999999999999999999999987543
No 150
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.4e-43 Score=327.68 Aligned_cols=296 Identities=35% Similarity=0.612 Sum_probs=228.6
Q ss_pred ceEeeeeeccCCceEEEEEEEcCC--CcEEEEEEecccc------cchHHHHHHHHhC-CCCCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLET--GETVAIKKVLQDR------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~--~~~~aiK~~~~~~------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|++.+.||+|+||.||+|.+..+ +..||+|.+.... ....+|+.+++.+ +||||+++++...... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 589999999999999999999888 8999999886421 2234688999988 5999999988654322 2334
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|+++||++++|...+.. ...+++..++.++.||+.||+|||+ +|++||||||+||+++. ++.+||+|||++.
T Consensus 80 ~~~~~~e~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~-~~~~kl~Dfg~a~ 153 (332)
T cd07857 80 ELYLYEELMEADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNA-DCELKICDFGLAR 153 (332)
T ss_pred cEEEEEecccCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcC-CCCEEeCcCCCce
Confidence 5789999999887776653 4678999999999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCC-----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 186 VLVKGEA-----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 186 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
....... .....++..|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+....+..++..++.+..+.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 6543211 22346788999999987655689999999999999999999999999988889999999988887665
Q ss_pred HhhcCcCCc-C--ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCCCCCCCC
Q 017139 261 IRCMNPNYT-D--FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFP 337 (376)
Q Consensus 261 ~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~~~~~~~ 337 (376)
+........ . .........++.. .....+..+.+++.+||+.||.+|||+.+++.||||+.+.++.....+..+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~~~~~~~~ 312 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQKPFD 312 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCcccccccccccc
Confidence 443321100 0 0011111111111 12346889999999999999999999999999999999877644433444333
Q ss_pred C
Q 017139 338 P 338 (376)
Q Consensus 338 ~ 338 (376)
.
T Consensus 313 ~ 313 (332)
T cd07857 313 F 313 (332)
T ss_pred C
Confidence 3
No 151
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.7e-43 Score=322.56 Aligned_cols=283 Identities=31% Similarity=0.562 Sum_probs=220.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC---C
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS---K 102 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~---~ 102 (376)
..++|++.+.||.|+||.||+|.+..+++.+|+|++.... ....+|+++++.++||||+++++++..... .
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 4689999999999999999999999999999999885321 234579999999999999999988754321 2
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
....+++||||+.+++...+.. ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg 160 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDN-QGILKIADFG 160 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCCEEECcCc
Confidence 3456789999999887666653 24579999999999999999999999 79999999999999996 7889999999
Q ss_pred CccccccCCC------------cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 017139 183 SAKVLVKGEA------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 250 (376)
Q Consensus 183 ~~~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~ 250 (376)
++........ .....+++.|+|||.+.+...++.++|+||+||++|+|++|.+||.+.+.......+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9876543221 1223567889999998765558899999999999999999999999998888888888
Q ss_pred HhcCCCCHHHHhhcCc--CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 251 KVLGTPTREEIRCMNP--NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...+.+....+..... ................. ....+++++.++|.+||+.||.+|||+.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE-RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHH-HcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 8777666554432211 00000000000111111 112456889999999999999999999999999998
No 152
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-43 Score=321.06 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=208.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.|++.+.||.|+||+||+|.+..+++.+|+|.+.... ....+|+++++.++|+||+.+.+++ ..+..+
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEE
Confidence 3788999999999999999999999999999885432 1234689999999999999998888 445568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|++|||+.+ +|...+.. .....+++..+..++.|++.||.|||+ +||+||||||+||+++. ++.++|+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYN--MGNPGFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDD-YGHIRISDLGLAVK 151 (285)
T ss_pred EEEEEeccCccHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECC-CCCEEEecCCccee
Confidence 999999996 55444432 123469999999999999999999999 79999999999999996 67899999999876
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
...........|+..|+|||.+.+. .++.++|+||+||++|+|++|..||.+.........+........
T Consensus 152 ~~~~~~~~~~~g~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--------- 221 (285)
T cd05632 152 IPEGESIRGRVGTVGYMAPEVLNNQ-RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--------- 221 (285)
T ss_pred cCCCCcccCCCCCcCccChHHhcCC-CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc---------
Confidence 5443333456789999999999765 489999999999999999999999988766554444433211110
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
..++..++.++.+|+.+||..||++||+ +++++.||||+.....
T Consensus 222 ----------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~ 270 (285)
T cd05632 222 ----------------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK 270 (285)
T ss_pred ----------------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence 0123457889999999999999999999 8899999999987544
No 153
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.7e-43 Score=320.17 Aligned_cols=277 Identities=36% Similarity=0.668 Sum_probs=214.7
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+++++.++||||+++++++ .+...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 46999999999999999999999899999999875432 1234789999999999999999998 555668
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+||||++++++..+.. ....+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++...
T Consensus 76 ~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~-~~~~~l~dfg~~~~~ 150 (286)
T cd07846 76 YLVFEFVDHTVLDDLEK---YPNGLDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQ-SGVVKLCDFGFARTL 150 (286)
T ss_pred EEEEecCCccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECC-CCcEEEEeeeeeeec
Confidence 99999999865554433 23458999999999999999999999 79999999999999996 788999999998765
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....++..|+|||.+.+...++.++|+|||||++|+|++|.+||......+....+....+......-.....
T Consensus 151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07846 151 AAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQK 230 (286)
T ss_pred cCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhcc
Confidence 43322 23355788999999987655578899999999999999999999998887777777766655443222111110
Q ss_pred C--CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 N--YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. ......+..............++..+.+|+.+||..||++||++.++++||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0 01111121111111111234678999999999999999999999999999998
No 154
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-45 Score=311.87 Aligned_cols=325 Identities=31% Similarity=0.526 Sum_probs=254.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCC-Cc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSK-DE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~-~~ 104 (376)
...+|.-++.+|.|+- .|..|.+...++.||+|++... .+...+|..++..++|+||++++.+|...... ..
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 4457999999999998 8888999999999999988543 34556899999999999999999988543322 23
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+|+|||++..+|...+. ..++...+..++.|++.|++|||+ .||+||||||+||+++. +..+||.|||++
T Consensus 94 ~e~y~v~e~m~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~-~~~lKi~dfg~a 165 (369)
T KOG0665|consen 94 QEVYLVMELMDANLCQVIL------MELDHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNS-DCTLKILDFGLA 165 (369)
T ss_pred HhHHHHHHhhhhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecc-hhheeeccchhh
Confidence 3478999999999887776 336778899999999999999999 79999999999999996 889999999999
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
+.....-..+.++.|.+|+|||++.+.. +...+||||+|||+.||++|...|+|.+..++..++.+.+|.|.......+
T Consensus 166 r~e~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcccccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 8876665677888999999999998866 999999999999999999999999999999999999999999999988766
Q ss_pred CcCCcCc--cCCCCCCCCccccccc-----------CCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCCCCCC
Q 017139 265 NPNYTDF--RFPQIKAHPWHKVFHK-----------RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 331 (376)
Q Consensus 265 ~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~~~~~ 331 (376)
.+....+ ..|+.....+...+++ .-+..++|++.+||..||++|.+++++|+|||++-|-...+..
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~~~ev~- 323 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYDPDEVE- 323 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeeccccccc-
Confidence 5432222 1111111222222221 1234689999999999999999999999999999553333221
Q ss_pred CCCCCCCCCCchhhhhcCCHHHHhhhcHHHHHhhcCCC
Q 017139 332 NGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLS 369 (376)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (376)
.+ .|+.+.-.-++.+.+++.+..++.+++.+.-.++
T Consensus 324 -ap-~pe~~d~~~d~~~~t~~e~ke~If~ev~~f~~~~ 359 (369)
T KOG0665|consen 324 -AP-PPEIYDKQLDEREHTIEEWKELIFKEVQRFEEFN 359 (369)
T ss_pred -CC-CCchhhhhcccccCCHHHHHHHHHHHHHhhcccc
Confidence 11 1222222223444568888888888877665543
No 155
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-43 Score=317.30 Aligned_cols=248 Identities=29% Similarity=0.498 Sum_probs=202.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
++|.+.+.||+|++|.||+|.+..+++.+|+|.+.... ....+|+++++.++||||+++++++ .++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 46999999999999999999999999999999875432 1244688999999999999999988 444
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+++|+||+++ +|.+.+.. ...+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~-~~~~~l~dfg~ 150 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDS-AGNVKLGDFGA 150 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEeeccc
Confidence 579999999986 56555543 3568899999999999999999999 79999999999999995 78899999999
Q ss_pred ccccccCCCc----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 184 AKVLVKGEAN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 184 ~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
+......... ....++..|+|||.+.+.. ++.++|+||+||++|+|++|..||...+.......+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----- 224 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT----- 224 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC-----
Confidence 8755332211 2345678899999997654 89999999999999999999999987665544433322100
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...++..++.++.++|.+||..||.+|||+.++++||||
T Consensus 225 ----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 225 ----------------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ----------------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 112344678999999999999999999999999999997
No 156
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.4e-43 Score=319.43 Aligned_cols=277 Identities=35% Similarity=0.665 Sum_probs=220.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+|+++++.++|+||+++++++.. ...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 46999999999999999999999999999999875421 234579999999999999999999843 4458
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+++|||++++++..+.. ....+++..++.++.||+.||.|||+ +|++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 ~iv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~-~~~~kl~d~g~~~~~ 150 (288)
T cd07833 76 YLVFEYVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSE-SGVLKLCDFGFARAL 150 (288)
T ss_pred EEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCCEEEEeeeccccc
Confidence 99999999876665543 24568999999999999999999999 79999999999999996 888999999998776
Q ss_pred ccCC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 188 VKGE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 188 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......++..|+|||++.+...++.++|+||||+++|+|++|.+||.+....+.+..+....+...........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 151 RARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred CCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 5443 33345678899999999776468999999999999999999999999888777777777766665554433222
Q ss_pred c--CCcCccCCCC-CCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 266 P--NYTDFRFPQI-KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 266 ~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. .+.....+.. ....+...++..++.++.+||++||..||++|||+++++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 1 1111111111 11112223445568999999999999999999999999999998
No 157
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.9e-43 Score=319.35 Aligned_cols=275 Identities=34% Similarity=0.632 Sum_probs=217.8
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
|++.+.||.|++|.||+|.+..+|+.||+|++.... .....|+++++.++|||++++++++ .+....|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~-----~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVV-----HSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhhee-----ccCCeEEE
Confidence 678899999999999999999999999999886432 2244699999999999999999988 44566899
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
+|||++++|...+.... ...+++..+..++.|++.||+|||+ ++++|+||+|+||+++. ++.++|+|||++.....
T Consensus 76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~-~~~~~l~df~~~~~~~~ 151 (283)
T cd07835 76 VFEFLDLDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDR-EGALKLADFGLARAFGV 151 (283)
T ss_pred EEeccCcCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcC-CCcEEEeecccccccCC
Confidence 99999888777765422 1468999999999999999999999 79999999999999997 88899999999875532
Q ss_pred CC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 190 GE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 190 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
.. ......++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+....+.++.+..+.+....+.......
T Consensus 152 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 152 PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 22 22233568889999988665557899999999999999999999999988888888888877777766543221110
Q ss_pred c-CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 269 T-DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 269 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. ...++........ .....++.++.++|.+||+.||++|||+++++.||||
T Consensus 232 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 232 DYKPTFPKWARQDLS-KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hhhhhcccccccchh-hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0 0011111111111 1234678899999999999999999999999999998
No 158
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=6.1e-43 Score=324.56 Aligned_cols=282 Identities=36% Similarity=0.650 Sum_probs=221.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~~~~ 106 (376)
++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ....+|+.+++.++||||+++++++..... .....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 57999999999999999999999999999999886431 123479999999999999999998754321 12234
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+|+|+||+..++.... ...+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++..
T Consensus 95 ~~lv~e~~~~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~-~~~~kL~dfg~~~~ 166 (342)
T cd07879 95 FYLVMPYMQTDLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNE-DCELKILDFGLARH 166 (342)
T ss_pred EEEEecccccCHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEeeCCCCcC
Confidence 6899999987654432 2468999999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
... ......+++.|+|||.+.+...++.++|+|||||++|+|++|+.||.+.+....+..+....+.+..........
T Consensus 167 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T cd07879 167 ADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED 244 (342)
T ss_pred CCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence 432 223456788999999987655588999999999999999999999999888888888888777777665543321
Q ss_pred CCcC-c--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 267 NYTD-F--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 267 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.... + ..+......+...+ ...+.++.+||.+||+.||.+||++++++.||||+.+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 245 KAAKSYIKSLPKYPRKDFSTLF-PKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred cchHHHHhhcCCcccchHHHHh-cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 1100 0 11111111111111 2468899999999999999999999999999999988754
No 159
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.8e-43 Score=323.44 Aligned_cols=261 Identities=29% Similarity=0.477 Sum_probs=212.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||+|.+..+++.+|+|.+..... ....|+++++.++||||+++++.+ .+...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 469999999999999999999999999999999865432 234689999999999999999988 55566
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.|+||||+.| +|.+.+... .+..+++..++.++.|++.||+|||+ .|++|+||||+||+++. ++.++|+|||++.
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 151 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHE-SGHIMLSDFDLSK 151 (316)
T ss_pred EEEEEEecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcC-CCCEEEeecchhh
Confidence 8999999986 666655432 24678999999999999999999999 79999999999999996 7789999999986
Q ss_pred ccccCCC------------------------------cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCC
Q 017139 186 VLVKGEA------------------------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 235 (376)
Q Consensus 186 ~~~~~~~------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~ 235 (376)
....... .....|+..|+|||.+.+.. ++.++|+|||||++|+|++|..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~ 230 (316)
T cd05574 152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTT 230 (316)
T ss_pred cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCC
Confidence 5432211 11235788899999997654 7999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC----H
Q 017139 236 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT----A 311 (376)
Q Consensus 236 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~ 311 (376)
||.+.+....+..+.... ..++ ....++.++.++|.+||..||++||| +
T Consensus 231 pf~~~~~~~~~~~~~~~~-----------------~~~~----------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~ 283 (316)
T cd05574 231 PFKGSNRDETFSNILKKE-----------------VTFP----------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGA 283 (316)
T ss_pred CCCCCchHHHHHHHhcCC-----------------ccCC----------CccccCHHHHHHHHHHccCCHhHCCCchhhH
Confidence 998887766555443210 0011 01126889999999999999999999 9
Q ss_pred HHHhCCCccccccCCCCCCC
Q 017139 312 LEACAHPFFDELREPNARLP 331 (376)
Q Consensus 312 ~ell~hp~~~~~~~~~~~~~ 331 (376)
+++++||||+...++..+..
T Consensus 284 ~~ll~~~~~~~~~~~~~~~~ 303 (316)
T cd05574 284 AEIKQHPFFRGVNWALIRHT 303 (316)
T ss_pred HHHHcCchhhcCChhhcccC
Confidence 99999999999888766653
No 160
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.6e-43 Score=326.31 Aligned_cols=281 Identities=35% Similarity=0.557 Sum_probs=221.0
Q ss_pred ccccceEe-eeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------------------chHHHHHHHHhCCCCCeee
Q 017139 31 KQTISYMA-ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------------------YKNRELQLMRLMDHPNVIS 91 (376)
Q Consensus 31 ~~~~~y~~-~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------------~~~~e~~~l~~l~h~~Iv~ 91 (376)
...++|.. .+.||.|+||.||+|.+..+++.||+|++..... ...+|+++++.++|+||++
T Consensus 5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 34567875 5779999999999999999999999998854321 2347899999999999999
Q ss_pred cceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC
Q 017139 92 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 171 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~ 171 (376)
+++++ ....++++||||+.++|.+.+.. ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++.
T Consensus 85 ~~~~~-----~~~~~~~lv~e~~~~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill~~ 154 (335)
T PTZ00024 85 LVDVY-----VEGDFINLVMDIMASDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFINS 154 (335)
T ss_pred eeEEE-----ecCCcEEEEEeccccCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEECC
Confidence 99988 34456899999999988777754 4568999999999999999999999 79999999999999996
Q ss_pred CCCcEEEEecCCccccccC---------------CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCC
Q 017139 172 LTHQVKLCDFGSAKVLVKG---------------EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL 236 (376)
Q Consensus 172 ~~~~~kl~Dfg~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~p 236 (376)
++.++|+|||.+...... .......+++.|+|||.+.+...++.++|+|||||++|+|++|.+|
T Consensus 155 -~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p 233 (335)
T PTZ00024 155 -KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPL 233 (335)
T ss_pred -CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 778999999998765411 1112234578899999987655578999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCCHHHHhhcCcC--CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHH
Q 017139 237 FPGENAVDQLVEIIKVLGTPTREEIRCMNPN--YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 314 (376)
Q Consensus 237 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el 314 (376)
|.+.+..+.+..+....+.+....+...... +..+ ......... ......+.++.++|.+||+.||++|||++++
T Consensus 234 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 310 (335)
T PTZ00024 234 FPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEF--TPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEA 310 (335)
T ss_pred CCCCCHHHHHHHHHHHhCCCchhhCcchhhccccccc--CcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence 9999988888888888877766544322110 0000 000000111 1123468899999999999999999999999
Q ss_pred hCCCccccccC
Q 017139 315 CAHPFFDELRE 325 (376)
Q Consensus 315 l~hp~~~~~~~ 325 (376)
|.||||+....
T Consensus 311 l~~~~~~~~~~ 321 (335)
T PTZ00024 311 LKHEYFKSDPL 321 (335)
T ss_pred hcCcccCCCCC
Confidence 99999986543
No 161
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.5e-43 Score=318.26 Aligned_cols=262 Identities=24% Similarity=0.349 Sum_probs=208.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
..++|.+.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.+ +|||++++++++..........+
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~ 99 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL 99 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence 3678999999999999999999999999999999986532 2334688888888 89999999999865443344568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++||||+++ +|.+.+.........+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||+|||++..
T Consensus 100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~-~~~~kl~dfg~~~~ 177 (291)
T cd06639 100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTT-EGGVKLVDFGVSAQ 177 (291)
T ss_pred EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcC-CCCEEEeecccchh
Confidence 899999985 6666665544455679999999999999999999999 79999999999999986 77899999999876
Q ss_pred cccCC-CcceeeccccccChhhhhCCC----CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 187 LVKGE-ANISYICSRYYRAPELIFGAT----EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 187 ~~~~~-~~~~~~~t~~y~aPE~~~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
..... ......++..|+|||.+.... .++.++|+|||||++|+|++|+.||...+....+..+.+.. +.
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~--~~---- 251 (291)
T cd06639 178 LTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP--PP---- 251 (291)
T ss_pred cccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC--CC----
Confidence 54322 122345788899999875432 25789999999999999999999998776655544332210 00
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
....+..++..+.++|.+||+.||++||++.++++||||+
T Consensus 252 --------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 252 --------------------TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred --------------------CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 0001234677899999999999999999999999999995
No 162
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-46 Score=308.48 Aligned_cols=286 Identities=31% Similarity=0.522 Sum_probs=230.5
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeec---CCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFST---TSK 102 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~---~~~ 102 (376)
....|.-..++|+|.||.||+|+++.+|+.||+|++.-+. ....+|+++|..++|+|++.+++++-+. ...
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 3456888999999999999999999999999999764321 2234899999999999999998876332 334
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
+...+|+|+.+|+.+|.-++.. ...+++...+..++.+++.||.|+|+ ..|+|||+|+.|+||+. ++.+||+|||
T Consensus 95 ~r~t~ylVf~~cehDLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~-dgilklADFG 169 (376)
T KOG0669|consen 95 DRATFYLVFDFCEHDLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITK-DGILKLADFG 169 (376)
T ss_pred ccceeeeeHHHhhhhHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcC-CceEEeeccc
Confidence 4567899999999888777765 34679999999999999999999999 79999999999999996 8899999999
Q ss_pred CccccccCC-----CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 183 SAKVLVKGE-----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 183 ~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
+++...... ..+..+.|.+|++||.+++...|+++.|+|..|||+.+|.++.+.|++++...++..|....|...
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 997664321 123455699999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCc--CCcCccCCCCCCCCccccc----ccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 258 REEIRCMNP--NYTDFRFPQIKAHPWHKVF----HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 258 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
.+-|+.... -+..+..+.+.......+- +-.-.+++.||+.++|..||.+|++++++|+|.||..
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 887765431 1222212212111111110 0112468999999999999999999999999999964
No 163
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=9.4e-43 Score=323.59 Aligned_cols=285 Identities=34% Similarity=0.585 Sum_probs=223.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CCce
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KDEL 105 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~~~ 105 (376)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++..... ....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 478999999999999999999999999999999986432 223468999999999999999988753321 2234
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|+++++++++|...+.. ..+++..++.++.|++.||+|||+ .|++||||||+||+++. ++.+||+|||++.
T Consensus 96 ~~~lv~~~~~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~-~~~~kl~dfg~~~ 168 (345)
T cd07877 96 DVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNE-DCELKILDFGLAR 168 (345)
T ss_pred cEEEEehhcccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcC-CCCEEEecccccc
Confidence 5789999998887665543 468999999999999999999999 79999999999999996 7789999999987
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......++..|+|||.+.+...++.++|+||+||++|+|++|..||.+.+....+..+....+.+.........
T Consensus 169 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T cd07877 169 HTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 246 (345)
T ss_pred cccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcc
Confidence 6432 22345678899999998765558899999999999999999999999888888888888877777665554332
Q ss_pred cCCcCc---cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 266 PNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 266 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
...... ..+......+.. .....++++.++|.+||+.||.+|+++.++++||||+++..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~ 310 (345)
T cd07877 247 SESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 310 (345)
T ss_pred cHhHHHHHHHhcccCCcchhh-hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCC
Confidence 211000 001111111111 1124688999999999999999999999999999999876654
No 164
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.8e-43 Score=319.24 Aligned_cols=274 Identities=39% Similarity=0.740 Sum_probs=222.4
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
|.+.+.||.|++|.||+|.+..+++.+++|.+..... ...+|+.+++.++|+||+++++++ .+...+++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence 6788999999999999999999999999999865432 234688999999999999999988 44456899
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|+||+++++.+.+... ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~-~~~~~l~df~~~~~~~~ 150 (283)
T cd05118 76 VFEFMDTDLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINT-EGVLKLADFGLARSFGS 150 (283)
T ss_pred EEeccCCCHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECC-CCcEEEeeeeeeEecCC
Confidence 9999999887776552 3578999999999999999999999 79999999999999996 77899999999876654
Q ss_pred CC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc--
Q 017139 190 GE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP-- 266 (376)
Q Consensus 190 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 266 (376)
.. ......++..|+|||.+.+...++.++|+||+|+++|+|++|+.||.+.+..+....+....+.+....+.....
T Consensus 151 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 151 PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred CcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence 43 223355788899999987664689999999999999999999999999988888888888888777665554333
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
......++....... ......++.++.++|.+||.+||.+||++.++++||||
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 231 RNYKFSFPKKAGMPL-PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhccccccCH-HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 111122222222222 11234578999999999999999999999999999997
No 165
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=3.3e-45 Score=299.61 Aligned_cols=284 Identities=32% Similarity=0.599 Sum_probs=235.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-cchHHHHHHHHhCC-CCCeeecceeeeecCCCCceeEEE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-RYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.+++|++++++|+|-|+.||.|.+..+++.++||+++.-. +...+|+.+|+.+. ||||+++.++.-+. ......+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDP---ESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCc---cccCchh
Confidence 4678999999999999999999999999999999997643 45678999999997 99999999988543 3344679
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|+||++..-...+ -+.++...++.++.|++.||.|||+ .||.|||+||.|+++|.....++|+|+|+|.+...
T Consensus 113 iFE~v~n~Dfk~l------y~tl~d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQL------YPTLTDYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHH------hhhhchhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999997522222 3568889999999999999999999 69999999999999998788899999999999988
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHHhcCCCCHHHHh-----h
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF-PGENAVDQLVEIIKVLGTPTREEIR-----C 263 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf-~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 263 (376)
.......+.+.+|..||++...+.|+..-|+|||||++..|+..+.|| .|.++.+++.+|.+.+|+......- .
T Consensus 186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~ 265 (338)
T KOG0668|consen 186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID 265 (338)
T ss_pred CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence 887778888999999999988888999999999999999999987665 7889999999999999986543321 1
Q ss_pred cCcCCcCccCCCCCCCCccccccc----CCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHK----RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
+.+.+.++ .......+|...++. -+++++.||+.++|..|..+|+||.|++.||||..+...
T Consensus 266 Ldp~~~~i-~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 266 LDPQFEDI-LGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA 331 (338)
T ss_pred CChhHhhH-hhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence 22222221 223344556555543 257999999999999999999999999999999876544
No 166
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-46 Score=319.06 Aligned_cols=253 Identities=27% Similarity=0.435 Sum_probs=208.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc--cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+-|.++.+||+|+||.||+|.++.+|..+|||.+..+. +...+|+.++++++.|++|++++.|+-..+ ++|||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-----LWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-----LWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-----eEeeh
Confidence 35788999999999999999999999999999986554 445589999999999999999999965444 99999
Q ss_pred eccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
|||+ |+..+.++. .+.++++.++..++..-+.||+|||.+ .-+|||||..|||++. ++..||+|||.+....+.
T Consensus 108 EYCGAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT-~G~AKLADFGVAGQLTDT 182 (502)
T KOG0574|consen 108 EYCGAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNT-DGIAKLADFGVAGQLTDT 182 (502)
T ss_pred hhcCCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcc-cchhhhhhccccchhhhh
Confidence 9999 565555554 368899999999999999999999995 7899999999999997 888999999998765443
Q ss_pred -CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 191 -EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 191 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
....+.+|||.|||||++.... |...+||||||++..||+.|++||.+..+...+. ..|+... .
T Consensus 183 MAKRNTVIGTPFWMAPEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------MIPT~PP--------P 247 (502)
T KOG0574|consen 183 MAKRNTVIGTPFWMAPEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------MIPTKPP--------P 247 (502)
T ss_pred HHhhCccccCcccccHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccceeE------eccCCCC--------C
Confidence 3456789999999999997655 8999999999999999999999998765432221 1111000 0
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
.++ -|+..|.++.|||++||.++|++|.|+-++++|||+++.
T Consensus 248 TF~------------KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 248 TFK------------KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred CCC------------ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 011 123468899999999999999999999999999999864
No 167
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.9e-43 Score=319.36 Aligned_cols=250 Identities=30% Similarity=0.499 Sum_probs=208.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|++++++++||||+++++++ .+...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCe
Confidence 46999999999999999999999999999999885432 2244689999999999999999988 44556
Q ss_pred EEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||++ ++|.+.+.. ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||++.
T Consensus 76 ~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~-~~~~kl~dfg~~~ 149 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDS-DGYIKITDFGFAK 149 (290)
T ss_pred EEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECC-CCCEEEeeCCCcc
Confidence 899999996 576666654 3679999999999999999999999 79999999999999996 7789999999988
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
..... .....+++.|+|||.+.+. .++.++|+||||+++|+|++|..||...+.......+... .
T Consensus 150 ~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~---------- 214 (290)
T cd05580 150 RVKGR--TYTLCGTPEYLAPEIILSK-GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--K---------- 214 (290)
T ss_pred ccCCC--CCCCCCCccccChhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--C----------
Confidence 76444 3345678999999998654 4789999999999999999999999887755444443321 0
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
..++..++..++++|.+||+.||.+|+ +++++++||||+.+.+.
T Consensus 215 -----------------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 263 (290)
T cd05580 215 -----------------VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWI 263 (290)
T ss_pred -----------------ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHH
Confidence 013345688999999999999999999 99999999999987754
No 168
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.5e-42 Score=321.91 Aligned_cols=286 Identities=36% Similarity=0.650 Sum_probs=222.2
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCC-Cc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSK-DE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~-~~ 104 (376)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++...... ..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 3467999999999999999999999999999999885432 1234699999999999999999988543221 12
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+++||||+++++...+.. ..+++..++.++.|++.||+|||+ .||+||||||+||+++. ++.++|+|||++
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~-~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNE-DCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEeecccc
Confidence 34689999997777665542 568999999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...... .....+++.|+|||.+.+...++.++|+|||||++|+|++|..||.+.+.......+.+..+.+..+.....
T Consensus 166 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd07880 166 RQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKL 243 (343)
T ss_pred cccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 765332 223456889999999876445789999999999999999999999988887788777776666554433322
Q ss_pred CcCCc-C--ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 265 NPNYT-D--FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 265 ~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
..... . ...+......+ ..+...+++++.++|.+||+.||++|||+.+++.||||+.+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~ 308 (343)
T cd07880 244 QSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPE 308 (343)
T ss_pred cchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcc
Confidence 21100 0 00111111111 112346788999999999999999999999999999999886653
No 169
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.6e-43 Score=317.36 Aligned_cols=264 Identities=24% Similarity=0.349 Sum_probs=209.4
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhC-CCCCeeecceeeeecCCCCc
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.+...++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....|+.+++.+ +||||+++++++.......+
T Consensus 13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence 4456788999999999999999999999999999999875432 2345688889998 69999999998865544556
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+++||||++| +|.+.+.........+++..++.++.|++.||.|||+ ++++||||||+||+++. ++.++|+|||+
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~-~~~~kl~dfg~ 170 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTT-EGGVKLVDFGV 170 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECC-CCCEEEccCCc
Confidence 678999999985 6766666544455678999999999999999999999 79999999999999996 77799999999
Q ss_pred ccccccCC-CcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 184 AKVLVKGE-ANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 184 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+....... ......+++.|+|||++.. ...++.++|+||+||++|+|++|..||...+....+..+... .+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~--~~-- 246 (286)
T cd06638 171 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PP-- 246 (286)
T ss_pred eeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--CC--
Confidence 87654322 2234467899999998743 233788999999999999999999999876544333221110 00
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.....+...+.++.+++.+||+.||++|||+.++++||||
T Consensus 247 ----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 247 ----------------------PTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ----------------------CcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 0001123457789999999999999999999999999997
No 170
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-44 Score=297.25 Aligned_cols=257 Identities=26% Similarity=0.363 Sum_probs=205.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.+|+|.+.||+|||+.||+++...++..||+|++.... ....+|++..+.++|||+++++++............||
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 48999999999999999999999999999999986554 33457999999999999999999877665556677899
Q ss_pred Eeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC--ceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 110 VMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG--VCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 110 v~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~--ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+++|.. |+|++.+......+..+++.++..|+.+|++||++||+ .. ++||||||.|||+.. ++.++|.|||.+..
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~-~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSD-SGLPVLMDLGSATQ 178 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecC-CCceEEEeccCccc
Confidence 999987 78999999888888899999999999999999999999 68 999999999999996 78899999999875
Q ss_pred cccCCC----------cceeeccccccChhhhhCC--CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Q 017139 187 LVKGEA----------NISYICSRYYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 254 (376)
Q Consensus 187 ~~~~~~----------~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~ 254 (376)
..-.-. -....||..|+|||++.-. ...+.++|||||||++|.|+.|..||...- +.-|
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~---------~~Gg 249 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIY---------QQGG 249 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHh---------hcCC
Confidence 432111 1234579999999998432 236889999999999999999999995321 1000
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
... ..-....+.+|. ...+|+.+.++|+.||++||.+||++.+++.+
T Consensus 250 Sla------LAv~n~q~s~P~----------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 250 SLA------LAVQNAQISIPN----------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred eEE------EeeeccccccCC----------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 000 000001122222 12479999999999999999999999999864
No 171
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.4e-43 Score=314.16 Aligned_cols=263 Identities=28% Similarity=0.410 Sum_probs=210.0
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhC-CCCCeeecceeeeecCC-CCc
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLM-DHPNVISLKHCFFSTTS-KDE 104 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~-~~~ 104 (376)
|..+++|++.+.||.|++|.||+|.+..+++.+++|++.... ....+|+.+++.+ +|+||+++++++..... ...
T Consensus 2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 566789999999999999999999999999999999986543 2345788999998 79999999999865443 345
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+|+||||+++ +|.+.+......+..+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~-~~~~~l~d~~~ 159 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTK-NAEVKLVDFGV 159 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEcc-CCeEEECCCcc
Confidence 678999999996 6666665544345779999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCC-CcceeeccccccChhhhhCC----CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 184 AKVLVKGE-ANISYICSRYYRAPELIFGA----TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 184 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+....... ......++..|+|||.+... ..++.++|+|||||++|+|++|..||..........++.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---- 235 (275)
T cd06608 160 SAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP---- 235 (275)
T ss_pred ceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC----
Confidence 87653322 22345678899999987532 2367889999999999999999999986655544444332100
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
+ ....+..++.++.++|.+||..||++|||+.++++|||+
T Consensus 236 ---------------~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 236 ---------------P-------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ---------------C-------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0 000112367899999999999999999999999999996
No 172
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.4e-43 Score=315.84 Aligned_cols=275 Identities=39% Similarity=0.713 Sum_probs=221.9
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCC-CCCeeecceeeeecCCCCceeEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
|.+.+.||.|++|.||+|+...+++.++||.+..... ...+|+..++.++ |+||+++++++ .++...++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-----~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF-----RENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHh-----hcCCcEEE
Confidence 6889999999999999999999999999998865432 2235888899998 99999999988 44556899
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
||||+++++.+.+.... ...+++..+..++.|++.+|.|||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~-~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 76 VFEYMEGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSG-PEVVKIADFGLAREIRS 151 (283)
T ss_pred EEecCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcC-CCCEEEeecccceeccC
Confidence 99999888877776532 3578999999999999999999999 79999999999999996 78899999999987655
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc--C
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP--N 267 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 267 (376)
........++..|+|||.+.+...++.++|+||||+++++|++|.+||......+....+....+.+....+..... .
T Consensus 152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 152 RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 54445566788999999886655689999999999999999999999999988888888888888877654432211 0
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...+.++..........++ ..+.++.++|.+||+.||++|||+.|++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccccccHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 1111222222222222222 347899999999999999999999999999997
No 173
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.5e-43 Score=317.23 Aligned_cols=277 Identities=32% Similarity=0.614 Sum_probs=217.9
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
|.+.+.||.|+||.||+|.+..+++.+|+|.+.... ....+|+++++.++|||++++++++... +....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 788999999999999999999999999999997652 1234689999999999999999988432 1256899
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
||||+++++...+... ...+++..++.++.||+.||+|||+ .|++|+||+|+||+++. ++.++|+|||++.....
T Consensus 78 v~e~~~~~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~-~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 78 VFEYMDHDLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINN-DGVLKLADFGLARPYTK 152 (287)
T ss_pred EeccccccHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcC-CCCEEEccccceeeccC
Confidence 9999998877766542 2578999999999999999999999 79999999999999996 88899999999876654
Q ss_pred CC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 190 GE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 190 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.. ......++..|+|||.+.+...++.++|+||||+++|+|++|..||...+....+..+.+..+.+....+......
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 33 1233456788999998766555789999999999999999999999998888888888887777665554332211
Q ss_pred --CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 268 --YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 268 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.................+...+++++.+++.+||..||++||++.+++.||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00000000000011122222348899999999999999999999999999997
No 174
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-43 Score=315.46 Aligned_cols=304 Identities=28% Similarity=0.434 Sum_probs=240.1
Q ss_pred ceEeeccCC----CCCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccch---HHHHHHHHhCC----
Q 017139 17 HIISTTIGG----KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMD---- 85 (376)
Q Consensus 17 ~~~~~~~~~----~~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~e~~~l~~l~---- 85 (376)
....|..+| +.|++...++|.+.++||.|-|++||+|.+..+.+.||+|+.+....+. ..|+++|+.++
T Consensus 57 ~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp 136 (590)
T KOG1290|consen 57 DPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDP 136 (590)
T ss_pred ChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCC
Confidence 334566666 5666666789999999999999999999999999999999997765443 36899998873
Q ss_pred ----CCCeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceecc
Q 017139 86 ----HPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRD 161 (376)
Q Consensus 86 ----h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~d 161 (376)
..+||++++.|-... ....++|+|+|+++..|+.++.... .+.++...++.|+.|||.||.|||+-.||+|.|
T Consensus 137 ~~~~~~~VV~LlD~FkhsG-pNG~HVCMVfEvLGdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTD 213 (590)
T KOG1290|consen 137 NDPGKKCVVQLLDHFKHSG-PNGQHVCMVFEVLGDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHRECGIIHTD 213 (590)
T ss_pred CCCCCceeeeeeccceecC-CCCcEEEEEehhhhhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhcCccccC
Confidence 357999999986554 6778899999999999999998753 467999999999999999999999867999999
Q ss_pred CCCCCeeecCCC--------------------------------------------------------------------
Q 017139 162 VKPQNLLVDPLT-------------------------------------------------------------------- 173 (376)
Q Consensus 162 lkp~Nill~~~~-------------------------------------------------------------------- 173 (376)
|||+|||+...+
T Consensus 214 lKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~ 293 (590)
T KOG1290|consen 214 LKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEG 293 (590)
T ss_pred CCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccc
Confidence 999999983100
Q ss_pred --------------------------------------------------------------------------------
Q 017139 174 -------------------------------------------------------------------------------- 173 (376)
Q Consensus 174 -------------------------------------------------------------------------------- 173 (376)
T Consensus 294 ~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~ 373 (590)
T KOG1290|consen 294 IEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGT 373 (590)
T ss_pred ccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccc
Confidence
Q ss_pred -----------------CcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCC
Q 017139 174 -----------------HQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL 236 (376)
Q Consensus 174 -----------------~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~p 236 (376)
-++||+|||-|..... ..+.-+.|..|+|||++.+.. |++.+||||++|++|||+||...
T Consensus 374 ~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~k--hFT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyL 450 (590)
T KOG1290|consen 374 IASNPLVNPDIPLPECDIRVKIADLGNACWVHK--HFTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYL 450 (590)
T ss_pred cccccccCCCCCCCccceeEEEeeccchhhhhh--hhchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCcee
Confidence 0356666666654321 223446688899999999876 99999999999999999999999
Q ss_pred CCCC------ChHHHHHHHHHhcCCCCHHHHhhc-------CcCCcCccCCCCCCCCcccccccC------CChhHHHHH
Q 017139 237 FPGE------NAVDQLVEIIKVLGTPTREEIRCM-------NPNYTDFRFPQIKAHPWHKVFHKR------MPPEAIDLA 297 (376)
Q Consensus 237 f~~~------~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~li 297 (376)
|... .+.+.++.|++.+|..++.....- +..-.-..+..++.+++..++.+. -..++.|||
T Consensus 451 FePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL 530 (590)
T KOG1290|consen 451 FEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFL 530 (590)
T ss_pred ecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9532 467889999999999887755321 222222256666777776665542 235688999
Q ss_pred HhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 298 SRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 298 ~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.-||+++|.+|+||.++|+|||+..+-.+
T Consensus 531 ~PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 531 SPMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred HHHHhcCccccccHHHHhcCccccCCCCC
Confidence 99999999999999999999999876543
No 175
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.8e-43 Score=317.94 Aligned_cols=260 Identities=25% Similarity=0.419 Sum_probs=204.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ ..+..+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEE
Confidence 47999999999999999999999999999999886432 2234689999999999999999988 4455689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|...+.. ......+++..+..++.|++.||.|||+..|++|+||||+||+++. ++.++|+|||.+...
T Consensus 76 lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 153 (286)
T cd06622 76 MCMEYMDAGSLDKLYAG-GVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG-NGQVKLCDFGVSGNL 153 (286)
T ss_pred EEEeecCCCCHHHHHHh-ccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC-CCCEEEeecCCcccc
Confidence 99999997 55444443 2223479999999999999999999996249999999999999996 788999999998755
Q ss_pred ccCCCcceeeccccccChhhhhCCC-----CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGEANISYICSRYYRAPELIFGAT-----EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~-----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
... ......+++.|+|||.+.+.. .++.++|+|||||++|+|++|..||...........+........
T Consensus 154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----- 227 (286)
T cd06622 154 VAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP----- 227 (286)
T ss_pred cCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC-----
Confidence 322 222345788899999985432 257899999999999999999999976554433333222111100
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
..++..++.++.++|.+||..||++||+++++++||||......
T Consensus 228 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 228 --------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred --------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 01233578999999999999999999999999999999876543
No 176
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.6e-43 Score=325.02 Aligned_cols=251 Identities=26% Similarity=0.397 Sum_probs=193.2
Q ss_pred cccceEeeeeeccCCceEEEEEEEc-----CCCcEEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTT 100 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~ 100 (376)
..++|++.+.||+|+||.||+|.+. .+++.||+|++.... ....+|+.++..+ +||||+++++++.
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--- 81 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT--- 81 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec---
Confidence 3468999999999999999999752 345789999986432 2244689999999 8999999998773
Q ss_pred CCCceeEEEEeecccc-hHHHHHHhhhh----------------------------------------------------
Q 017139 101 SKDELFLNLVMEYVPE-TMYRVLKHYSS---------------------------------------------------- 127 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g-~l~~~l~~~~~---------------------------------------------------- 127 (376)
..+..+++|||||++ +|.+.+.....
T Consensus 82 -~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 82 -KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred -CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 223357899999995 77766654211
Q ss_pred ------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC---cceeec
Q 017139 128 ------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYIC 198 (376)
Q Consensus 128 ------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~ 198 (376)
....+++..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||+++....... .....+
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcC-CCcEEEeecccccccccCcchhcccCCCC
Confidence 12357888999999999999999999 79999999999999996 78899999999976533221 112334
Q ss_pred cccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCC
Q 017139 199 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 277 (376)
Q Consensus 199 t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (376)
++.|+|||++.+. .++.++|||||||++|+|++ |..||.+....+.+...+.. +..
T Consensus 239 ~~~y~aPE~~~~~-~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~--------------------- 295 (338)
T cd05102 239 PLKWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GTR--------------------- 295 (338)
T ss_pred CccccCcHHhhcC-CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CCC---------------------
Confidence 6789999998765 48999999999999999997 99999876544333332221 000
Q ss_pred CCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 278 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...++++.+++.+||+.||++|||+.++++
T Consensus 296 -----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 296 -----MRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0023356889999999999999999999999874
No 177
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2e-43 Score=318.60 Aligned_cols=254 Identities=26% Similarity=0.445 Sum_probs=199.0
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|.+.+.||+|+||.||+|.+..+++.||+|.+..+. .....|+++++.++||||+++++++. .....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-----VENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----ECCEEE
Confidence 36889999999999999999999999999999986542 22346899999999999999999984 344588
Q ss_pred EEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 109 LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+||||++++.+... ..+++..+..++.|++.||.|||+ .||+|+||||+||+++. ++.++|+|||++....
T Consensus 76 lv~e~~~~~~l~~~-------~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~-~~~~~l~dfg~~~~~~ 146 (279)
T cd06619 76 ICTEFMDGGSLDVY-------RKIPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNT-RGQVKLCDFGVSTQLV 146 (279)
T ss_pred EEEecCCCCChHHh-------hcCCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECC-CCCEEEeeCCcceecc
Confidence 99999997543322 347888899999999999999999 79999999999999996 7889999999987653
Q ss_pred cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHhcCCCCHHHHhhcC
Q 017139 189 KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ---LVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 189 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 265 (376)
.. ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||........ ............
T Consensus 147 ~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------- 216 (279)
T cd06619 147 NS-IAKTYVGTNAYMAPERISGE-QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-------- 216 (279)
T ss_pred cc-cccCCCCChhhcCceeecCC-CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC--------
Confidence 32 23345788999999998765 489999999999999999999999965322110 001111100000
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.+ .......++++.+++.+||+.||++||+++++++||||...+..
T Consensus 217 -------~~--------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~ 262 (279)
T cd06619 217 -------PP--------VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDG 262 (279)
T ss_pred -------CC--------CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCc
Confidence 00 00112467899999999999999999999999999999876443
No 178
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.9e-42 Score=315.78 Aligned_cols=283 Identities=30% Similarity=0.513 Sum_probs=219.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC----
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS---- 101 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~---- 101 (376)
..++|++.+.||.|+||.||+|.+..+|+.||+|.+.... ....+|+++++.++||||+++++++....+
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4568999999999999999999999999999999986432 123468999999999999999988744320
Q ss_pred -CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEe
Q 017139 102 -KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 102 -~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
.+...+++|+||+++++...+... ...+++..++.++.|++.||.|||+ .||+|+||+|+||+++. ++.+||+|
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~-~~~~kl~d 159 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNN-KGQIKLAD 159 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECC-CCcEEeCc
Confidence 123378999999999877666542 3568999999999999999999999 79999999999999996 78899999
Q ss_pred cCCccccccCCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 181 FGSAKVLVKGEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 181 fg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
||++........ .....++..|+|||.+.+...++.++|+|||||++|+|++|++||...+..+.+..+.+..+.+..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP 239 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 999876543321 122345778999998866555789999999999999999999999988888888888887777665
Q ss_pred HHHhhcCcC--CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 259 EEIRCMNPN--YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 259 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..++..... +............+. .....++..+.++|.+||..||++||++.+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 240 AVWPDVIKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred hhcccccccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 544322110 000000000000111 1223468999999999999999999999999999997
No 179
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.1e-42 Score=315.94 Aligned_cols=258 Identities=26% Similarity=0.409 Sum_probs=204.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.+.|++++.||.|+||.||+|++..+++.+++|.+..... ...+|+.+++.++||||+++++++. .+..+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 85 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLW 85 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEE
Confidence 3679999999999999999999999999999999865432 2346889999999999999999884 344589
Q ss_pred EEeecccchHH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPETMY-RVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g~l~-~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||++++.+ ..+.. ....+++..++.++.|++.+|.|||+ +|++||||+|+||+++. ++.++|+|||++...
T Consensus 86 lv~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~~~ 160 (292)
T cd06644 86 IMIEFCPGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTL-DGDIKLADFGVSAKN 160 (292)
T ss_pred EEEecCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcC-CCCEEEccCccceec
Confidence 99999997543 33322 23568999999999999999999999 79999999999999986 788999999988654
Q ss_pred ccC-CCcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKG-EANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~-~~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
... .......+++.|+|||.+.+ ...++.++|+|||||++|+|++|.+||...+......++.... ++
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~----- 233 (292)
T cd06644 161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--PP----- 233 (292)
T ss_pred cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC--Cc-----
Confidence 322 22234567889999998852 2336789999999999999999999998766544443332210 00
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
....+..++.++.++|.+||..||++||+++++++||||..+...
T Consensus 234 -------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 234 -------------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred -------------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 001223568899999999999999999999999999999876554
No 180
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=334.78 Aligned_cols=248 Identities=27% Similarity=0.485 Sum_probs=205.5
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeccc----ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecccc
Q 017139 41 VVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE 116 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g 116 (376)
+||+|.||+||.|++..+...+|||.+... .+...+|+.+-++++|.|||++.+++ .+++++-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCCC
Confidence 799999999999999999999999998543 34456899999999999999999997 667788899999996
Q ss_pred -hHHHHHHhhhhcCCCC--CHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC-
Q 017139 117 -TMYRVLKHYSSMNQRM--PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA- 192 (376)
Q Consensus 117 -~l~~~l~~~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~- 192 (376)
+|.+++.. .- +++ .|..+..+-.||+.||+|||+ +.|||||||-+|+|++...|.+||+|||.++....-.+
T Consensus 657 GSLSsLLrs-kW--GPlKDNEstm~fYtkQILeGLkYLHe-n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 657 GSLSSLLRS-KW--GPLKDNESTMNFYTKQILEGLKYLHE-NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred CcHHHHHHh-cc--CCCccchhHHHHHHHHHHHHhhhhhh-cceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence 55555544 22 344 788899999999999999999 79999999999999999899999999999887655433
Q ss_pred cceeeccccccChhhhhC-CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCc
Q 017139 193 NISYICSRYYRAPELIFG-ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 271 (376)
Q Consensus 193 ~~~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (376)
..++.||..|||||++.. ...|++++|||||||++.||+||++||......... +.+ .|..
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--MFk-VGmy--------------- 794 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--MFK-VGMY--------------- 794 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--hhh-hcce---------------
Confidence 346789999999999954 345999999999999999999999999765443221 111 1110
Q ss_pred cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 272 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
..+..+|..++.+++.||.+|+..||.+||+|.++|..||++.-
T Consensus 795 --------KvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 795 --------KVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred --------ecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 11333667789999999999999999999999999999999865
No 181
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.1e-43 Score=322.64 Aligned_cols=278 Identities=21% Similarity=0.313 Sum_probs=198.6
Q ss_pred eeeeeccC--CceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 38 AERVVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 38 ~~~~Lg~G--~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
++++||+| +|++||++.+..+|+.||+|++.... ....+|+.+++.++||||+++++++. .+..+|+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 46789999 78899999999999999999986432 23456899999999999999999884 4445899
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
||||+++ +|.+++.... ...+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.++++||+.+....
T Consensus 77 v~e~~~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~-~~~~~l~~~~~~~~~~ 152 (327)
T cd08227 77 VTSFMAYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISV-DGKVYLSGLRSNLSMI 152 (327)
T ss_pred EEeccCCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEec-CCcEEEcccchhhccc
Confidence 9999985 6666664322 2458999999999999999999999 79999999999999996 7789999998654332
Q ss_pred cCCC--------cceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC----
Q 017139 189 KGEA--------NISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT---- 255 (376)
Q Consensus 189 ~~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~---- 255 (376)
.... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||................-.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (327)
T cd08227 153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 232 (327)
T ss_pred cccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccc
Confidence 1111 1123456779999998653 34889999999999999999999999876544433332221000
Q ss_pred ---CCHHHHhhcC------cCCcCccC----CCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 256 ---PTREEIRCMN------PNYTDFRF----PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 256 ---~~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
...+.+.... ........ ...........+...+++++.+||.+||++||++|||++++++||||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 0000000000 00000000 0000000011123356789999999999999999999999999999987
Q ss_pred cc
Q 017139 323 LR 324 (376)
Q Consensus 323 ~~ 324 (376)
+.
T Consensus 313 ~~ 314 (327)
T cd08227 313 IK 314 (327)
T ss_pred cc
Confidence 54
No 182
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-44 Score=324.10 Aligned_cols=253 Identities=26% Similarity=0.425 Sum_probs=195.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCC-CCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
..|++.++||.||.+.||+|...+. +.||+|++.... .....|+.+|..|+ |.+|++++++- -.+.+
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~d~~ 434 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VTDGY 434 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----ccCce
Confidence 4799999999999999999996544 566766654322 22347999999985 89999999987 44677
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+|+||||-+-+|...|..+. ..++.-.++.+..|++.|+.++|. +||||.||||.|+|+- .|.+||+|||.|..
T Consensus 435 lYmvmE~Gd~DL~kiL~k~~---~~~~~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLlV--kG~LKLIDFGIA~a 508 (677)
T KOG0596|consen 435 LYMVMECGDIDLNKILKKKK---SIDPDWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLLV--KGRLKLIDFGIANA 508 (677)
T ss_pred EEEEeecccccHHHHHHhcc---CCCchHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEEE--eeeEEeeeechhcc
Confidence 99999998889888887743 234445889999999999999999 7999999999999997 67899999999988
Q ss_pred cccCCC---cceeeccccccChhhhhCCC----------CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 017139 187 LVKGEA---NISYICSRYYRAPELIFGAT----------EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 253 (376)
Q Consensus 187 ~~~~~~---~~~~~~t~~y~aPE~~~~~~----------~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~ 253 (376)
...+.. ..+.+||+.||+||.+.... .++.++||||||||||+|+.|++||..... ...++...
T Consensus 509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--~~aKl~aI- 585 (677)
T KOG0596|consen 509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--QIAKLHAI- 585 (677)
T ss_pred cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--HHHHHHhh-
Confidence 766544 34678999999999984321 257899999999999999999999975432 22222221
Q ss_pred CCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 254 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
..|. .++.+|.+. -..++.++++.||.+||.+|||+.++|+|||++-.
T Consensus 586 ~~P~-----------~~Iefp~~~-----------~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 586 TDPN-----------HEIEFPDIP-----------ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred cCCC-----------ccccccCCC-----------CchHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence 1111 112223221 12239999999999999999999999999999763
No 183
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.6e-42 Score=312.86 Aligned_cols=274 Identities=38% Similarity=0.698 Sum_probs=224.4
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
|++.+.||+|++|.||+|++..+++.+|+|++.... .....|+.+++.++|+||+++++++ .+...+++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVI-----HTERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhh-----hcCCceEE
Confidence 677899999999999999999999999999986542 1234688999999999999999988 34456899
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
||||++++|.+.+... ...+++..+..++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 76 v~e~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~-~~~~~l~d~g~~~~~~~ 150 (282)
T cd07829 76 VFEYCDMDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINR-DGVLKLADFGLARAFGI 150 (282)
T ss_pred EecCcCcCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcC-CCCEEEecCCcccccCC
Confidence 9999999888777652 1469999999999999999999999 79999999999999996 78899999999876544
Q ss_pred CC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 190 GE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 190 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
.. ......++..|+|||.+.+...++.++|+|||||++|++++|.+||.+.+..+.+..+....+.+....+.......
T Consensus 151 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 151 PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence 32 22234457789999998766468999999999999999999999999999888888898888888877665443221
Q ss_pred -cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 269 -TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
....++..........++ .++.++.++|.+||..||++||++++++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 231 DYKPTFPKFPPKDLEKVLP-RLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccccccCccchHHhcc-cccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 222334333333333333 358899999999999999999999999999998
No 184
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.3e-42 Score=312.05 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=202.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhC-CCCCeeecceeeeecCCC-CceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLM-DHPNVISLKHCFFSTTSK-DELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~-~~~~~ 107 (376)
.+.|++.+.||+|+||.||+|.+..+++.+|+|.+.... .....|+.+++.+ +|+||+++++++...... ....+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 457999999999999999999999999999999986543 2345688888888 699999999988654322 23568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|++|||+++ +|.+.+... ....+++..+..++.|++.||+|||+ ++|+|+||+|+||+++. ++.++|+|||++..
T Consensus 85 ~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~-~~~~~l~Dfg~~~~ 160 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECC-CCCEEEccCCCcee
Confidence 899999985 666655542 23568999999999999999999999 79999999999999996 77899999999876
Q ss_pred cccC-CCcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 187 LVKG-EANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 187 ~~~~-~~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
.... .......+++.|+|||++.+ ...++.++|+||+||++|+|++|..||...............
T Consensus 161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~--------- 231 (272)
T cd06637 161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN--------- 231 (272)
T ss_pred cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---------
Confidence 5332 22334567889999999853 224788999999999999999999999765544333222110
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.........++.++.+|+.+||..||.+|||+.+++.||||
T Consensus 232 ------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 232 ------------------PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ------------------CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 00001123467899999999999999999999999999997
No 185
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=327.09 Aligned_cols=252 Identities=31% Similarity=0.551 Sum_probs=212.7
Q ss_pred ceEe--eeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 35 SYMA--ERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 35 ~y~~--~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
-|+| .++||+|.||+||-|+++.+|+.||||++.+- ......|+.+|+.+.||.||.+...| +....
T Consensus 563 vYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~er 637 (888)
T KOG4236|consen 563 VYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPER 637 (888)
T ss_pred HHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCce
Confidence 4555 47899999999999999999999999998543 34456799999999999999998777 44445
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC--CcEEEEecCCc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT--HQVKLCDFGSA 184 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~--~~~kl~Dfg~~ 184 (376)
+++|||-+.|++++.+... ..+++++...+.++.||+.||.|||. ++|+|+||||+|||+.+.+ -.+||||||+|
T Consensus 638 vFVVMEKl~GDMLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~-knIvHCDLKPENVLLas~~~FPQvKlCDFGfA 714 (888)
T KOG4236|consen 638 VFVVMEKLHGDMLEMILSS--EKGRLPERITKFLVTQILVALRYLHF-KNIVHCDLKPENVLLASASPFPQVKLCDFGFA 714 (888)
T ss_pred EEEEehhhcchHHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhh-cceeeccCCchheeeccCCCCCceeeccccce
Confidence 8899999999988887753 45789999999999999999999999 7999999999999997433 26999999999
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHHHhh
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA-VDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~ 263 (376)
+...+..-..+.+|||.|+|||++.... |...-|+||.|||+|.-+.|.+||....+ .+++++
T Consensus 715 RiIgEksFRrsVVGTPAYLaPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN--------------- 778 (888)
T KOG4236|consen 715 RIIGEKSFRRSVVGTPAYLAPEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN--------------- 778 (888)
T ss_pred eecchhhhhhhhcCCccccCHHHHhhcc-ccccccceeeeEEEEEEecccccCCCccchhHHhhc---------------
Confidence 9998888888999999999999998655 89999999999999999999999975433 233322
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
..+.+|. .|| +.+++++.|||+.+|++.-.+|.|++..|.|||+++.
T Consensus 779 -----AaFMyPp---~PW-----~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 779 -----AAFMYPP---NPW-----SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred -----cccccCC---Cch-----hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 1222221 233 3579999999999999999999999999999999875
No 186
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.3e-42 Score=306.77 Aligned_cols=249 Identities=27% Similarity=0.440 Sum_probs=202.8
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||.|++|.||++.+..+++.+|+|.+.... .....|+++++.++|+|++++++.+. ..+..+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 4999999999999999999999999999999985432 22346889999999999999987762 2345688
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|||+++ +|.+.+... ....+++..++.++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||++...
T Consensus 77 lv~e~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~-~~~~~l~df~~~~~~ 152 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTR-TNIIKVGDLGIARVL 152 (257)
T ss_pred EEecccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEec-CCcEEEecccceEEe
Confidence 99999985 666666542 24568999999999999999999999 79999999999999996 788999999998766
Q ss_pred ccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ......+++.|+|||++.+. .++.++|+||+||++|+|++|..||...+.......+.....
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------------ 219 (257)
T cd08223 153 ENQCDMASTLIGTPYYMSPELFSNK-PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL------------ 219 (257)
T ss_pred cccCCccccccCCcCccChhHhcCC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC------------
Confidence 4332 22344678899999998664 488999999999999999999999987765554444332100
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...+..+++++.+++.+||+.||++|||+.++++||||
T Consensus 220 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 ----------------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ----------------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00223578899999999999999999999999999997
No 187
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.4e-42 Score=318.58 Aligned_cols=281 Identities=38% Similarity=0.720 Sum_probs=221.5
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
..++|.+.+.||.|+||.||+|.+..+++.+|+|++... ......|+++++.++||||+++.+++.. ...
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~ 83 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS----PLE 83 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----CCC
Confidence 456899999999999999999999999999999987542 1234479999999999999999998743 223
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|+++||++++|...+.. ..+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||.+.
T Consensus 84 ~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~-~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELLGTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINE-NCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehhccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECC-CCCEEeCcccccc
Confidence 4789999998887666543 468888899999999999999999 79999999999999996 7889999999987
Q ss_pred ccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 186 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 186 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ......++..|+|||.+.+...++.++|+||+||++|+|++|..||.+.........+.+.++.++.+......
T Consensus 157 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd07856 157 IQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTIC 234 (328)
T ss_pred ccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 5432 22345678889999988664558999999999999999999999999988877777778888877755543221
Q ss_pred cCC-cCc--cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 266 PNY-TDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 266 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
..- .++ ..+.....+... ....++.++.++|.+||+.||++|||+++++.||||.....+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~ 297 (328)
T cd07856 235 SENTLRFVQSLPKREPVPFSE-KFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP 297 (328)
T ss_pred chhhHHHHhhccccCCCcHHH-HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence 110 000 011111111111 123578899999999999999999999999999999877665
No 188
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2e-42 Score=309.72 Aligned_cols=256 Identities=28% Similarity=0.426 Sum_probs=204.6
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|++.+.||.|+||+||+|.+..++..+|+|++.... ....+|+.+++.++|+||+++++.+ .....++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF-----VVGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEE-----eeCCEEE
Confidence 47999999999999999999999899999999886432 2345789999999999999999887 3445588
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|||++++ +|.+.+... .....+++..++.++.|++.||.+||+ .|++|+||+|+||+++. ++.++|+|||++...
T Consensus 76 iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~-~~~~~l~df~~~~~~ 152 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSS-YPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGE-DGSVKIADFGVSASL 152 (267)
T ss_pred EEEeccCCCcHHHHHHHh-cccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcC-CCCEEEcccchHHHh
Confidence 99999986 555555432 123568999999999999999999999 79999999999999996 778999999998766
Q ss_pred ccCCCc-----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGEAN-----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
...... ....++..|+|||.+.....++.++|+|||||++|+|++|..||...+............ +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~----- 225 (267)
T cd06610 153 ADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND--PP----- 225 (267)
T ss_pred ccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC--CC-----
Confidence 543222 334578899999998765458999999999999999999999998776654444433310 00
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. ++. ......+++++.+++.+||..||++|||+.+++.||||
T Consensus 226 -------~--~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 226 -------S--LET-------GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred -------C--cCC-------ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0 000 00123578899999999999999999999999999998
No 189
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8.6e-43 Score=313.65 Aligned_cols=251 Identities=27% Similarity=0.416 Sum_probs=205.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|.+.+.||.|++|.||+|.+..+++.+|+|.+.... ....+|+.+++.++|+||+++++++. ++..+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 46999999999999999999999999999999986543 22456899999999999999999884 345689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|+||+++ +|.+.+.. ..+++..++.++.|++.||.|||+ ++++|+||+|+||+++. ++.++|+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~ 148 (274)
T cd06609 76 IIMEYCGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSE-EGDVKLADFGVSGQL 148 (274)
T ss_pred EEEEeeCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEEcccccceee
Confidence 99999986 66555543 378999999999999999999999 79999999999999996 788999999998776
Q ss_pred ccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
... .......+++.|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+.....
T Consensus 149 ~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~------------ 215 (274)
T cd06609 149 TSTMSKRNTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNP------------ 215 (274)
T ss_pred cccccccccccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCC------------
Confidence 543 2233456788899999997654 89999999999999999999999987665444333222100
Q ss_pred CCcCccCCCCCCCCcccccccC-CChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
..+... +++++.+++.+||..||++|||++++++||||++...
T Consensus 216 ----------------~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 216 ----------------PSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred ----------------CCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 001122 6889999999999999999999999999999987433
No 190
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-44 Score=298.34 Aligned_cols=262 Identities=26% Similarity=0.400 Sum_probs=214.0
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccch-----HHHHHH-HHhCCCCCeeecceeeeecCCC
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQL-MRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~e~~~-l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
.+...++..++..||.|..|+|++++.+.+|...|||.+.+..... ...+++ ++..++|+||+.+++|....+
T Consensus 87 ~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d- 165 (391)
T KOG0983|consen 87 YQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD- 165 (391)
T ss_pred cccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch-
Confidence 3456677888899999999999999999999999999997653221 123333 334458999999999976554
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
++|.||.|..-...+++. ..++++|..+-++...++.||.||.+-+||+|||+||+|||+|. .|++||||||
T Consensus 166 ----V~IcMelMs~C~ekLlkr---ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe-~GniKlCDFG 237 (391)
T KOG0983|consen 166 ----VFICMELMSTCAEKLLKR---IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGNIKLCDFG 237 (391)
T ss_pred ----HHHHHHHHHHHHHHHHHH---hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc-CCCEEeeccc
Confidence 789999988555555554 34679999999999999999999997679999999999999996 8899999999
Q ss_pred CccccccCCCcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCHH
Q 017139 183 SAKVLVKGEANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~~~~~~~~~~~~~~ 259 (376)
.+....+....+...|-+.|||||.+.- ...|+.++||||||++++||+||+.||.+.+ +.+.+..++.. .|+
T Consensus 238 IsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--ePP-- 313 (391)
T KOG0983|consen 238 ISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--EPP-- 313 (391)
T ss_pred ccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc--CCC--
Confidence 9999988888888999999999999843 3458899999999999999999999999854 45666666552 111
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
......++|+++++|+..||++|+.+||.-.++|+|||+.....
T Consensus 314 ----------------------~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~ 357 (391)
T KOG0983|consen 314 ----------------------LLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET 357 (391)
T ss_pred ----------------------CCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence 00122357999999999999999999999999999999987543
No 191
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-44 Score=328.87 Aligned_cols=248 Identities=30% Similarity=0.482 Sum_probs=211.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.|.=++.||.|+||.||.|++..+.+.||||++.-..+ .+.+|+..|+.++|||++.+.+||+-... .
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~T-----a 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHT-----A 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccch-----H
Confidence 46667899999999999999999999999999965432 23479999999999999999999964433 7
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|||||-|+-.+++.-. ..++.+..+..|+.+.+.||.|||+ .+.||||||..|||++. .+.|||+|||.|...
T Consensus 102 WLVMEYClGSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse-~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 102 WLVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSE-PGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHHHhccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecC-CCeeeeccccchhhc
Confidence 899999999776776553 3679999999999999999999999 69999999999999995 889999999998765
Q ss_pred ccCCCcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 188 VKGEANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.+..+++|||+|||||+++. ...|+.++||||||++..+|+-.++|....+....+..|...- .
T Consensus 177 ---~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe-s---------- 242 (948)
T KOG0577|consen 177 ---APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-S---------- 242 (948)
T ss_pred ---CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC-C----------
Confidence 34568999999999999853 3459999999999999999999999999999888887776521 1
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
|.+.. ...|..+..||..||++-|.+|||++++|.|+|...
T Consensus 243 --------PtLqs--------~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 243 --------PTLQS--------NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred --------CCCCC--------chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 11111 235889999999999999999999999999999965
No 192
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-42 Score=314.01 Aligned_cols=255 Identities=26% Similarity=0.384 Sum_probs=205.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.++|++.+.||.|+||.||+|.+..+++.+|+|.+..... ...+|+++++.++||||+++++.+ ..+..+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY-----FYENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----ecCCeEE
Confidence 4679999999999999999999998999999999864322 234689999999999999999988 3445689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|.+.+.. ....+++..++.++.|++.||.|||+ +||+|+||+|+||+++. ++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~-~~~~~l~d~g~~~~~ 153 (280)
T cd06611 79 ILIEFCDGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTL-DGDVKLADFGVSAKN 153 (280)
T ss_pred EEeeccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECC-CCCEEEccCccchhh
Confidence 99999996 55555443 23569999999999999999999999 79999999999999996 788999999987654
Q ss_pred ccCC-CcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGE-ANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
.... ......+++.|+|||.+.. ...++.++|+|||||++|+|++|..||...+.......+... .+
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~------ 225 (280)
T cd06611 154 KSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EP------ 225 (280)
T ss_pred cccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC--CC------
Confidence 3322 2234567899999999752 233678999999999999999999999877665544433221 00
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
+ ....+..++.++.++|.+||+.||++||++.++++||||...
T Consensus 226 -----------~-------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 226 -----------P-------TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred -----------C-------CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 0 000123568899999999999999999999999999999875
No 193
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.9e-42 Score=307.27 Aligned_cols=252 Identities=25% Similarity=0.429 Sum_probs=207.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||.|+||.||+|.+..+++.+|+|.+.... .....|+++++.++||||+++++++.. .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 5899999999999999999999999999999885432 123358899999999999999987753 3345688
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhH-----cCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH-----TVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH-----~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
++|||+++ +|.+.+.........+++..++.++.||+.||.||| + .+++|+||+|+||+++. ++.+||+|||
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~-~~~~kl~d~g 155 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDA-NNNVKLGDFG 155 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEec-CCCEEEeccc
Confidence 99999985 777777765555678999999999999999999999 8 69999999999999996 7889999999
Q ss_pred CccccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 183 SAKVLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 183 ~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
++........ .....+++.|+|||.+.+.. ++.++|+||||+++|+|++|..||...+.......+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-------- 226 (265)
T cd08217 156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK-------- 226 (265)
T ss_pred ccccccCCcccccccccCCCccChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC--------
Confidence 9887654433 33456799999999986644 8899999999999999999999998876444333322110
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...++...+.++.+++.+||..+|++||++.++++|||+
T Consensus 227 --------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 --------------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred --------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 011334578899999999999999999999999999996
No 194
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.4e-42 Score=316.06 Aligned_cols=279 Identities=25% Similarity=0.393 Sum_probs=204.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|++.+.||+|+||.||++.+..++..+|+|.+.... ....+|+++++.++||||+++++++ .++..+|
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAF-----YSDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeCCEEE
Confidence 46999999999999999999999999999999886442 1234699999999999999999998 4455689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|.+.+.. ...+++..+..++.|++.||.|||+..+++|+||||+||+++. ++.+||+|||++...
T Consensus 76 lv~ey~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 150 (308)
T cd06615 76 ICMEHMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS-RGEIKLCDFGVSGQL 150 (308)
T ss_pred EEeeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec-CCcEEEccCCCcccc
Confidence 99999986 66666553 3668999999999999999999997248999999999999996 778999999998755
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh--hcC
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR--CMN 265 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 265 (376)
... ......+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...+.... ................ ...
T Consensus 151 ~~~-~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 151 IDS-MANSFVGTRSYMSPERLQGT-HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred ccc-ccccCCCCcCccChhHhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCccccccccCCccccc
Confidence 332 22345678999999998654 488999999999999999999999976653322 2222211100000000 000
Q ss_pred cCCcC----cc----CCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 266 PNYTD----FR----FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 266 ~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
....+ .. ................++.++.+|+.+||..||++|||+.++++||||.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 295 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAEL 295 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhccc
Confidence 00000 00 00000000000011136788999999999999999999999999999987533
No 195
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.1e-42 Score=306.69 Aligned_cols=249 Identities=31% Similarity=0.455 Sum_probs=206.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||+|+||.||+|.+..+++.+|+|.+.... .....|+.+++.++||||+++++.+ .....++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 5999999999999999999999999999999986432 2344689999999999999999887 4455689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|.+.+... ....+++..+..++.|++.+|+|||+ +|++|+||+|+||+++.+++.+||+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGISKIL 152 (256)
T ss_pred EEEecCCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCCceec
Confidence 99999986 676666542 23558999999999999999999999 799999999999999865677899999999876
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
..........++..|+|||.+.+. .++.++|+||+|+++|+|++|..||.+.+.......+.....
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~------------- 218 (256)
T cd08220 153 SSKSKAYTVVGTPCYISPELCEGK-PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF------------- 218 (256)
T ss_pred CCCccccccccCCcccCchhccCC-CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC-------------
Confidence 555444456678899999998654 478999999999999999999999988766555444332100
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..++..++.++.+++.+||..||++|||+.++++||||
T Consensus 219 ---------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 219 ---------------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred ---------------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 01233578899999999999999999999999999997
No 196
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=303.28 Aligned_cols=259 Identities=25% Similarity=0.414 Sum_probs=204.2
Q ss_pred ccceEee-eeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCC-CCCeeecceeeeecCCCCcee
Q 017139 33 TISYMAE-RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 33 ~~~y~~~-~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.+-|.+. +.||+|+|+.|--|....+|..||||++.+.. ....+|++++...+ |+||+.++++| +++..
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF-----Edd~~ 150 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF-----EDDTR 150 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh-----cccce
Confidence 3456553 68999999999999999999999999997653 33457999999884 99999999999 77777
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC--cEEEEecCC
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGS 183 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~--~~kl~Dfg~ 183 (376)
+|+|||-+.| .|+..+.. ...+++.++.+++.+|+.||.+||. +||.||||||+|||...-+. -+|||||.+
T Consensus 151 FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeecccc
Confidence 9999999996 66666554 4679999999999999999999999 89999999999999864232 489999988
Q ss_pred ccccccC--------CCcceeeccccccChhhhh----CCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH--------
Q 017139 184 AKVLVKG--------EANISYICSRYYRAPELIF----GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV-------- 243 (376)
Q Consensus 184 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~----~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-------- 243 (376)
....... ....+.+|+..|||||+.. ....|+.++|.||||+|+|-|++|.+||.++-..
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe 305 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE 305 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence 7543221 2234567888999999862 2345899999999999999999999999865211
Q ss_pred -------HHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 244 -------DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 244 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+..|.+ ..|.+|. . -+..+|.+++|+|+.+|..|+..|.++.++++
T Consensus 306 ~Cr~CQ~~LFesIQE-----------------GkYeFPd---k-----dWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 306 VCRVCQNKLFESIQE-----------------GKYEFPD---K-----DWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccHHHHHHHHHHHhc-----------------cCCcCCh---h-----hhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11112211 1122221 1 12357999999999999999999999999999
Q ss_pred CCccccccCC
Q 017139 317 HPFFDELREP 326 (376)
Q Consensus 317 hp~~~~~~~~ 326 (376)
|||++.+...
T Consensus 361 hPw~~~~~~e 370 (463)
T KOG0607|consen 361 HPWVQRCAPE 370 (463)
T ss_pred Cccccccchh
Confidence 9999887554
No 197
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.1e-42 Score=313.56 Aligned_cols=252 Identities=26% Similarity=0.416 Sum_probs=203.6
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
..+|++.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.+.|+||+++++.+. ....+|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEEE
Confidence 357999999999999999999999999999999886543 23346889999999999999999884 344589
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|...+.. ..+++..+..++.|++.||.|||+ .||+|+||||+||+++. ++.++|+|||++...
T Consensus 94 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~-~~~~kl~dfg~~~~~ 166 (296)
T cd06654 94 VVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQI 166 (296)
T ss_pred EeecccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcC-CCCEEECccccchhc
Confidence 99999985 66665542 458899999999999999999999 79999999999999986 788999999998765
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...+.......+.. .+.+
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~---------- 234 (296)
T cd06654 167 TPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTP---------- 234 (296)
T ss_pred cccccccCcccCCccccCHHHHcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCC----------
Confidence 33221 2234678899999998654 478999999999999999999999987765443332221 0100
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
....+..++..+.+++.+||..||++|||+.++++||||...
T Consensus 235 ---------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 235 ---------------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred ---------------CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 001223578899999999999999999999999999999864
No 198
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.6e-42 Score=310.67 Aligned_cols=252 Identities=29% Similarity=0.517 Sum_probs=201.2
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
+|+..+.||+|+||.||+|.+..+++.+|+|++.... ....+|+.+++.++|+||+++++++ .+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 4888999999999999999999999999999886432 2334689999999999999999998 455
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+++|+||+.| +|.+.+.. ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++.++..+||+|||.
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~dfg~ 150 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIADFGA 150 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccccc
Confidence 568999999996 56665543 3568999999999999999999999 79999999999999986556799999999
Q ss_pred ccccccCCC-----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 184 AKVLVKGEA-----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 184 ~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+........ .....++..|+|||.+.+. .++.++|+||+||++|+|++|..||...+.......+.+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 226 (268)
T cd06630 151 AARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE-QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA--- 226 (268)
T ss_pred ccccccccccCCccccccccccceeCHhHhccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc---
Confidence 876643321 1234568899999998654 4889999999999999999999999755433222222211000
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
.....++..+++++.+++.+||..||++||++.++++||||+
T Consensus 227 ---------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 ---------------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ---------------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 000113345789999999999999999999999999999985
No 199
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-43 Score=337.84 Aligned_cols=249 Identities=25% Similarity=0.424 Sum_probs=199.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCC-CCCeeecce-eeeecCCCC-cee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMD-HPNVISLKH-CFFSTTSKD-ELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~-h~~Iv~~~~-~~~~~~~~~-~~~ 106 (376)
-+++|.+.|.+|||+.||+|.+...|..||+|++.... ....+|+++|+.|+ |+|||.+++ ......+.. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 46789999999999999999999888999999885442 33458999999997 999999999 443332333 467
Q ss_pred EEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC--ceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 107 LNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG--VCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 107 ~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~--ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
+.|+||||. |+|.+++..+.. ..|++.++.+|++++++|+.+||.+ . |||||||-|||||+. ++..||||||.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~-~g~~KLCDFGS 192 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSA-DGNYKLCDFGS 192 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcC-CCCEEeCcccc
Confidence 889999999 699999987765 4499999999999999999999994 6 999999999999996 78899999999
Q ss_pred ccccccCCCc----------ceeeccccccChhhhh--CCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 017139 184 AKVLVKGEAN----------ISYICSRYYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 251 (376)
Q Consensus 184 ~~~~~~~~~~----------~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~ 251 (376)
+......... ....-|+.|+|||.+. .+..++.++|||+|||+||.|+....||........+ .
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIl----n 268 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAIL----N 268 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEE----e
Confidence 8654333211 1234589999999973 3345899999999999999999999999765332111 1
Q ss_pred hcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 252 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..|.+|.. .+++..+++||..||+.||++||++-+++.+
T Consensus 269 -----------------g~Y~~P~~----------p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 269 -----------------GNYSFPPF----------PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred -----------------ccccCCCC----------ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 23334421 3578999999999999999999999887653
No 200
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.7e-42 Score=309.66 Aligned_cols=278 Identities=35% Similarity=0.622 Sum_probs=216.2
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhC---CCCCeeecceeeeecCCCCcee
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLM---DHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l---~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
|++.+.||+|+||.||+|++..+++.+|+|.+..... ...+|+.+++.+ +||||+++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6889999999999999999998899999999864321 233577776665 5999999999986554434456
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++++|||++++|.+.+.... ...+++..++.++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||.+..
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~-~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTS-DGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcccCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEcc-CCCEEEeccCccee
Confidence 89999999988877665422 2358999999999999999999999 79999999999999997 68899999999887
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
...........++..|+|||.+.+.. ++.++|+||+||++|+|++|.+||.+....+.+..+....+.+....+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T cd07838 157 YSFEMALTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS 235 (287)
T ss_pred ccCCcccccccccccccChHHhccCC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence 65544444456788899999997654 89999999999999999999999999888888888877666554433221110
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.....++......+.. ....+++.+.++|.+||+.||++||+++++++||||
T Consensus 236 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 236 -LPRSSFPSYTPRSFKS-FVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred -cchhhcccccccchhh-hhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0000111111111111 122467889999999999999999999999999997
No 201
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.3e-42 Score=312.54 Aligned_cols=253 Identities=28% Similarity=0.454 Sum_probs=204.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
..+|++.+.||.|++|.||+|.+..+++.|++|.+..... ...+|+.+++.++||||+++++.+ .....+|
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 92 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF-----LVGDELF 92 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeE-----ecCceEE
Confidence 3579999999999999999999999999999998854322 234688999999999999999988 3445689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|+||+++ +|...+. ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++...
T Consensus 93 lv~e~~~~~~L~~~~~-----~~~l~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~Nili~~-~~~~kl~dfg~~~~~ 165 (296)
T cd06655 93 VVMEYLAGGSLTDVVT-----ETCMDEAQIAAVCRECLQALEFLHA-NQVIHRDIKSDNVLLGM-DGSVKLTDFGFCAQI 165 (296)
T ss_pred EEEEecCCCcHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEccCccchhc
Confidence 99999986 5544443 2468999999999999999999999 79999999999999986 788999999998765
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+.......+... +.+.
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~--------- 234 (296)
T cd06655 166 TPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE--------- 234 (296)
T ss_pred ccccccCCCcCCCccccCcchhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc---------
Confidence 43322 2234578899999998654 4789999999999999999999999887765544433221 1100
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
...+..+++.+.++|.+||..||++||++.+++.||||+...
T Consensus 235 ----------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 235 ----------------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred ----------------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 012235788999999999999999999999999999998654
No 202
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.4e-42 Score=309.42 Aligned_cols=250 Identities=29% Similarity=0.479 Sum_probs=198.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.+|.+.+.||+|+||.||+|.+..++..||+|.+.... ....+|+.+++.++||||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 46999999999999999999999999999999875321 124468899999999999999988743 224
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+++++||+++ +|.+.+.. ...+++..++.++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||+
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~-~~~~~l~dfg~ 152 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDS-AGNVKLGDFGA 152 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECC-CCCEEEccCCC
Confidence 568899999985 66666643 3568899999999999999999999 79999999999999986 77899999999
Q ss_pred ccccccCC----CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 184 AKVLVKGE----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 184 ~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
+....... ......++..|+|||.+.+. .++.++|+||+||++|+|++|..||...+.............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~----- 226 (266)
T cd06651 153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGE-GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT----- 226 (266)
T ss_pred ccccccccccCCccccCCccccccCHHHhCCC-CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC-----
Confidence 87543211 11234568889999998764 489999999999999999999999987655444433221100
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
...++..+++.+++++ +||..||++||+++++++||||+
T Consensus 227 ----------------------~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 227 ----------------------NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ----------------------CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 0112345688899999 67778999999999999999996
No 203
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.4e-42 Score=309.40 Aligned_cols=246 Identities=31% Similarity=0.533 Sum_probs=199.9
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------------cchHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------------RYKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
+|++.+.||.|++|.||+|.+..+++.+|+|.+.... ....+|+.+++.++||||+++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----- 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS----- 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----
Confidence 4889999999999999999999999999999885432 1234688999999999999999987
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEe
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
.+..+.+++|||+++ +|...+.. ...+++..+..++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~-~~~~~l~d 149 (267)
T cd06628 76 LDADHLNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDN-KGGIKISD 149 (267)
T ss_pred EeCCccEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcC-CCCEEecc
Confidence 344558899999986 66666543 3568899999999999999999999 79999999999999986 78899999
Q ss_pred cCCccccccCCC-------cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 017139 181 FGSAKVLVKGEA-------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 253 (376)
Q Consensus 181 fg~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~ 253 (376)
||.++....... .....++..|+|||.+.+. .++.++|+||+||++|+|++|..||...+.......+....
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 228 (267)
T cd06628 150 FGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT-SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA 228 (267)
T ss_pred cCCCcccccccccCCccccccccCCCcCccChhHhccC-CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC
Confidence 999876642211 1123468889999998654 47899999999999999999999998766544433322200
Q ss_pred CCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 254 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...++..++.++.++|.+||+.||.+||++.++++||||
T Consensus 229 ----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 ----------------------------SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ----------------------------CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 011234578999999999999999999999999999997
No 204
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=7.2e-42 Score=304.29 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=203.7
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||+|++|.||+|.+..+++.|++|.+... .....+|+++++.++||||+++++++ .+...+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF-----LDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee-----ccCCEEE
Confidence 488999999999999999999999999999988532 22334688899999999999999988 4455689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|.+.+... ....+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++...
T Consensus 76 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~-~~~~~l~df~~~~~~ 151 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDA-YDNVKIGDLGVAKLL 151 (256)
T ss_pred EEEEeCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeC-CCCEEEcccccceec
Confidence 99999985 776666542 24678999999999999999999999 79999999999999996 778999999998765
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....+++.|+|||++.+.. ++.++|+|||||++|+|++|..||...+.......+.....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 218 (256)
T cd08529 152 SDNTNFANTIVGTPYYLSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF------------ 218 (256)
T ss_pred cCccchhhccccCccccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC------------
Confidence 44322 23446788999999987654 88999999999999999999999988776554444332110
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..++..++.++.+++.+||+.+|++||++.+++.|||+
T Consensus 219 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 219 ----------------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ----------------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 01223468899999999999999999999999999995
No 205
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-42 Score=314.23 Aligned_cols=255 Identities=27% Similarity=0.424 Sum_probs=204.2
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
...+|++++.||+|+||.||+|.+..+++.||+|.+..... ...+|+.+++.++|+||+++++++ .....+
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~ 91 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDEL 91 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCEE
Confidence 34679999999999999999999999999999999864332 234688999999999999999988 445568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+||||+++ +|.+.+.. ..+++..+..++.|++.||.|||+ .|++|+||||+||+++. ++.++|+|||++..
T Consensus 92 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~-~~~~~l~Dfg~~~~ 164 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ 164 (297)
T ss_pred EEeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEECcCccceE
Confidence 999999986 55555532 458899999999999999999999 79999999999999986 78899999999876
Q ss_pred cccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
...... .....+++.|+|||.+.+. .++.++|+||+||++|+|++|..||.+.+.......+.. .+.+
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~--------- 233 (297)
T cd06656 165 ITPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP--------- 233 (297)
T ss_pred ccCCccCcCcccCCccccCHHHHcCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCC---------
Confidence 543322 2234678899999998654 478999999999999999999999977654332221111 0100
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
....+..++..+.+++.+||..||++||+++++++||||+....
T Consensus 234 ----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 234 ----------------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred ----------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 01123357888999999999999999999999999999987543
No 206
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.8e-42 Score=310.78 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=202.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhC-CCCCeeecceeeeecCC-CCcee
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLM-DHPNVISLKHCFFSTTS-KDELF 106 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~-~~~~~ 106 (376)
..+.|++.+.||.|+||.||+|.+..+++.+|+|.+.... .....|+.+++.+ +|+||+++++++..... .....
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 3468999999999999999999999999999999885543 2334678888888 79999999998854322 23567
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|++|||+++ +|.+.+... ....+++..++.++.||+.||.|||+ +|++|+||+|+||+++. ++.++|+|||++.
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~-~~~~~l~dfg~~~ 169 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNT--KGNALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTE-NAEVKLVDFGVSA 169 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEeeCcchh
Confidence 8999999986 666666542 23568899999999999999999999 79999999999999996 7789999999987
Q ss_pred ccccC-CCcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 186 VLVKG-EANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 186 ~~~~~-~~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
..... .......+++.|+|||.+.. ...++.++|+|||||++|+|++|..||...........+... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~----- 243 (282)
T cd06636 170 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN-PP----- 243 (282)
T ss_pred hhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC-CC-----
Confidence 54322 22334567889999998753 234788999999999999999999999766544333222110 00
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.......++.++.+||.+||..||.+|||+.+++.||||
T Consensus 244 ---------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 244 ---------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred ---------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 001123478899999999999999999999999999997
No 207
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.8e-42 Score=307.90 Aligned_cols=247 Identities=28% Similarity=0.471 Sum_probs=198.5
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
+|++++.||.|+||.||+|.+ .+++.+|+|.+.... ....+|+++++.++|+||+++++++ .+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC-----LDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe-----ecC
Confidence 588999999999999999986 578899999875432 2244689999999999999999988 445
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+++++||+++ +|.+.+.. ...+++..++.++.|++.||+|||+ .|++|+||+|+||+++. ++.++|+|||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~ 148 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMP-NGIIKLIDFGC 148 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECC-CCeEEeccchh
Confidence 668999999986 66555543 3568999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccC-------CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 017139 184 AKVLVKG-------EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 256 (376)
Q Consensus 184 ~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 256 (376)
+...... .......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+.......+....+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 226 (265)
T cd06631 149 ARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES-GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL- 226 (265)
T ss_pred hHhhhhccccccccccccccCCCccccChhhhcCC-CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-
Confidence 8754221 111234578899999998654 4789999999999999999999999876654433332221110
Q ss_pred CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 257 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...++..++.++.++|.+||+.||++||++.++++||||
T Consensus 227 -------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 227 -------------------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred -------------------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 011334578999999999999999999999999999997
No 208
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.9e-42 Score=306.30 Aligned_cols=248 Identities=34% Similarity=0.545 Sum_probs=202.8
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---------cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|+..+.||+|+||.||+|.+..+++.|++|.+.... ....+|+.+++.++|+||+++++++ .+..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence 4888999999999999999998899999999885432 2344689999999999999999987 4445
Q ss_pred eEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+|+++||+++ +|.+.+.. ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.+||+|||.+
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~-~~~~kl~d~~~~ 149 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDT-NGVVKLADFGMA 149 (258)
T ss_pred eEEEEEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEccCccc
Confidence 68999999986 66665543 3568899999999999999999999 79999999999999996 788999999998
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.............++..|+|||.+.....++.++|+|||||++|+|++|..||...........+......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------- 220 (258)
T cd06632 150 KQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL--------- 220 (258)
T ss_pred eeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccC---------
Confidence 77654443445667889999999865434789999999999999999999999876644444332221000
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..++..+++++.+++.+||+.||++||++.+++.|||+
T Consensus 221 ------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 221 ------------------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ------------------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 01234578999999999999999999999999999996
No 209
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.7e-42 Score=314.05 Aligned_cols=263 Identities=24% Similarity=0.357 Sum_probs=203.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCC-CCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++|...+.||+|+||.||++.+..+++.+|+|.+.... ....+|+.++.++. |+||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CCcE
Confidence 45778899999999999999999999999999986432 22346888888885 9999999998743 3447
Q ss_pred EEEeecccchHHHHHHhh-hhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+++|||+++++..+.... ......+++..+..++.|++.||+|||+..+++||||||+||+++. ++.+||+|||++..
T Consensus 79 ~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~ 157 (288)
T cd06616 79 WICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR-NGNIKLCDFGISGQ 157 (288)
T ss_pred EEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc-CCcEEEeecchhHH
Confidence 899999997665544321 2234679999999999999999999997249999999999999996 77899999999876
Q ss_pred cccCCCcceeeccccccChhhhhCC--CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...........++..|+|||.+.+. ..++.++|+||+||++|+|++|..||..... ....+.+......
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~------- 228 (288)
T cd06616 158 LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDP------- 228 (288)
T ss_pred hccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCC-------
Confidence 5544444445678899999998765 3588999999999999999999999976542 1222222111000
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
+.+ ....+..++.++.+|+.+||+.||++|||+++++.||||+....
T Consensus 229 ---------~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~ 275 (288)
T cd06616 229 ---------PIL-----SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEE 275 (288)
T ss_pred ---------CcC-----CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhh
Confidence 000 00112347889999999999999999999999999999987544
No 210
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4e-42 Score=307.18 Aligned_cols=246 Identities=30% Similarity=0.502 Sum_probs=200.5
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
||.|++|.||+|.+..+++.+|+|++.... ....+|+.+++.++||||+++++.+ .++..+|++|||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence 699999999999999999999999986432 2344688999999999999999987 4445589999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 193 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (376)
++ +|.+.+.. ...+++..+..++.||+.||+|||+ +|++|+||+|+||+++. ++.++|+|||++.........
T Consensus 76 ~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~-~~~~~l~df~~~~~~~~~~~~ 149 (262)
T cd05572 76 LGGELWTILRD----RGLFDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDS-NGYVKLVDFGFAKKLKSGQKT 149 (262)
T ss_pred CCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcC-CCCEEEeeCCcccccCccccc
Confidence 85 66666654 3458999999999999999999999 79999999999999996 788999999999876554333
Q ss_pred ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHhcCCCCHHHHhhcCcCCcCc
Q 017139 194 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN--AVDQLVEIIKVLGTPTREEIRCMNPNYTDF 271 (376)
Q Consensus 194 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (376)
....+++.|+|||.+.+. .++.++|+||+|+++|+|++|..||.... .......+.....
T Consensus 150 ~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------- 211 (262)
T cd05572 150 WTFCGTPEYVAPEIILNK-GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNG----------------- 211 (262)
T ss_pred ccccCCcCccChhHhcCC-CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCC-----------------
Confidence 445678899999998654 48999999999999999999999998765 3333333321000
Q ss_pred cCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCC
Q 017139 272 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREP 326 (376)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~ 326 (376)
...++...+.++.++|.+||..||++|++ +.|+++||||+++++.
T Consensus 212 ----------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 212 ----------KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred ----------CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 01133345889999999999999999999 9999999999987654
No 211
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.3e-42 Score=308.07 Aligned_cols=246 Identities=27% Similarity=0.451 Sum_probs=203.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
+|++.+.||.|+||.||+|.+..+++.||+|.+.+.. ....+|++++++++||||+++++++ .+...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 5899999999999999999999999999999986432 2344689999999999999999888 556669
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++|+||+.| +|...+.. ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||.+..
T Consensus 76 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~-~~~~~l~d~~~~~~ 149 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDE-QGHVHITDFNIATK 149 (258)
T ss_pred EEEEeCCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcC-CCCEEEeecccccc
Confidence 999999986 55555543 3578999999999999999999999 79999999999999996 78899999999887
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHHHHhhc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA--VDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...........++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+. .+.+......
T Consensus 150 ~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 216 (258)
T cd05578 150 VTPDTLTTSTSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------------ 216 (258)
T ss_pred cCCCccccccCCChhhcCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------------
Confidence 65544444566788999999986644 89999999999999999999999987664 2222211110
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH--HHHhCCCcc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA--LEACAHPFF 320 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~--~ell~hp~~ 320 (376)
....++..++.++.++|.+||..||.+||+. .|+++||||
T Consensus 217 ----------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ----------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ----------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0111334578999999999999999999999 999999998
No 212
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5e-42 Score=309.98 Aligned_cols=253 Identities=25% Similarity=0.380 Sum_probs=202.2
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
-|++.+.||.|+||.||+|.+..++..+++|.+.... ....+|+++++.++||||+++++++. .....++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEE
Confidence 4788999999999999999999999999999885432 22346889999999999999999884 34458899
Q ss_pred eecccchHH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPETMY-RVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g~l~-~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||++++.+ ..+.. ....+++..+..++.|++.||.|||+ .|++||||||+||+++. ++.+||+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~~~~ 155 (282)
T cd06643 81 IEFCAGGAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTL-DGDIKLADFGVSAKNTR 155 (282)
T ss_pred EEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEcc-CCCEEEccccccccccc
Confidence 999997543 33332 23568999999999999999999999 79999999999999986 78899999999865433
Q ss_pred CC-CcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 190 GE-ANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 190 ~~-~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.. ......++..|+|||++.. ...++.++|+||+||++|+|++|.+||...+.......+......
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--------- 226 (282)
T cd06643 156 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP--------- 226 (282)
T ss_pred cccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC---------
Confidence 21 2234567889999999742 234678999999999999999999999887765555444331100
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
....+..++.++.++|.+||..||++||+++++++||||+..
T Consensus 227 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 227 -----------------TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred -----------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 001223568899999999999999999999999999999863
No 213
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.9e-42 Score=310.14 Aligned_cols=253 Identities=24% Similarity=0.363 Sum_probs=200.0
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
..++|.+.+.||+|+||.||+|.+..+++.||+|.+..... ...+|+.+++.++||||+++++.+ .....+
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~-----~~~~~~ 81 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSY-----LRRDKL 81 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEE-----EeCCEE
Confidence 34689999999999999999999999999999998865422 234688999999999999999988 344558
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+||||+++ +|.+.+.. ...+++..++.++.|++.||.|||+ .|++|+||||+||+++. ++.++|+|||++..
T Consensus 82 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd06645 82 WICMEFCGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTD-NGHVKLADFGVSAQ 155 (267)
T ss_pred EEEEeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEECcceeeeE
Confidence 999999986 66665543 4579999999999999999999999 79999999999999996 77899999999865
Q ss_pred cccCC-CcceeeccccccChhhhh--CCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 187 LVKGE-ANISYICSRYYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 187 ~~~~~-~~~~~~~t~~y~aPE~~~--~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
..... ......|+..|+|||.+. ....++.++|+|||||++|+|++|..||..................
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~-------- 227 (267)
T cd06645 156 ITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQ-------- 227 (267)
T ss_pred ccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCC--------
Confidence 53322 223456889999999874 2234788999999999999999999999765543333222111000
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 319 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~ 319 (376)
.+.. .....++..+.++|.+||+.||++|||++++++|||
T Consensus 228 ---------~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 228 ---------PPKL-------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ---------CCcc-------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0000 001136788999999999999999999999999998
No 214
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.9e-42 Score=305.38 Aligned_cols=250 Identities=28% Similarity=0.452 Sum_probs=202.6
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc--cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
++|++.+.||+|+||.||+|....+++.+++|.+.... ....+|+++++.++||||+++++++. ....+|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEEEEE
Confidence 57999999999999999999999889999999986543 34557999999999999999999884 445689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+++ +|.+.+.. ....+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~-~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 78 EYCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNE-EGQAKLADFGVSGQLTDT 152 (256)
T ss_pred ecCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECC-CCcEEEcccccchhcccC
Confidence 99996 55555533 24678999999999999999999999 79999999999999996 778999999998866543
Q ss_pred C-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 191 E-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 191 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
. ......++..|+|||.+.+. .++.++|+||+|+++|+|++|..||...........+....
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~---------------- 215 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEI-GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP---------------- 215 (256)
T ss_pred ccccccccCCccccCHHHHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC----------------
Confidence 3 22334578899999998665 48999999999999999999999998765443322211100
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.+ ....+..++.++.++|.+||+.||++|||+.+++.||||
T Consensus 216 ---~~-------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 216 ---PP-------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ---CC-------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 00 000123467899999999999999999999999999997
No 215
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.9e-42 Score=309.25 Aligned_cols=251 Identities=28% Similarity=0.409 Sum_probs=200.2
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
||+|+||+||+|.+..+|+.||+|.+.... .....|+++++.++||||+++++.+ .....+|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 699999999999999999999999885421 1224689999999999999999888 4455689999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 193 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (376)
++ +|.+.+.... ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||.+.........
T Consensus 76 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~-~~~~~l~dfg~~~~~~~~~~~ 151 (277)
T cd05577 76 NGGDLKYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDD-HGNVRISDLGLAVELKGGKKI 151 (277)
T ss_pred CCCcHHHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECC-CCCEEEccCcchhhhccCCcc
Confidence 95 6665655422 2468999999999999999999999 79999999999999996 778999999998765443333
Q ss_pred ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccC
Q 017139 194 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 273 (376)
Q Consensus 194 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (376)
....++..|+|||.+.+.. ++.++|+||+||++|+|++|..||...........+......
T Consensus 152 ~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------ 212 (277)
T cd05577 152 KGRAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE------------------ 212 (277)
T ss_pred ccccCCCCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc------------------
Confidence 4456788899999987655 899999999999999999999999776542222222111000
Q ss_pred CCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCCC
Q 017139 274 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPN 327 (376)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~~ 327 (376)
....++..+++++.++|.+||+.||++|| ++.++++||||..+++..
T Consensus 213 -------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~ 264 (277)
T cd05577 213 -------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR 264 (277)
T ss_pred -------ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence 00113345789999999999999999999 899999999999887753
No 216
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.9e-42 Score=310.19 Aligned_cols=252 Identities=26% Similarity=0.398 Sum_probs=198.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.++|++.+.||+|+||.||+|++..+++.+|+|++.... ....+|+.+++.++||||+++++.+. ....++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEE
Confidence 457999999999999999999999999999999886432 23457899999999999999999884 344588
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|.+.+.. ...+++..+..++.|++.||+|||+ .||+|+||+|+||+++. ++.++|+|||++...
T Consensus 83 iv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~~ 156 (267)
T cd06646 83 ICMEYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTD-NGDVKLADFGVAAKI 156 (267)
T ss_pred EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECC-CCCEEECcCccceee
Confidence 99999996 56555543 3568999999999999999999999 79999999999999986 778999999998765
Q ss_pred ccCC-CcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 188 VKGE-ANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.... ......+++.|+|||.+.. ...++.++|+||+||++|+|++|..||...+.......+...
T Consensus 157 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~------------ 224 (267)
T cd06646 157 TATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS------------ 224 (267)
T ss_pred cccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC------------
Confidence 4322 2234567889999998742 233678999999999999999999999655433222111110
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 319 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~ 319 (376)
.+..+.. .....++..+.++|.+||+.||++|||++++++|+|
T Consensus 225 -----~~~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 225 -----NFQPPKL-------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -----CCCCCCC-------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 0000000 011246889999999999999999999999999998
No 217
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.8e-42 Score=305.95 Aligned_cols=253 Identities=28% Similarity=0.418 Sum_probs=202.6
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.++|++.+.||.|+||.||+|.+..+++.+++|.+.... ....+|+++++.++||||+++++++ .+...+|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEE
Confidence 368999999999999999999999999999999986542 3345789999999999999999988 3445589
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|||+++ +|...+.. ....+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||.+...
T Consensus 77 l~~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~ 151 (262)
T cd06613 77 IVMEYCGGGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTE-DGDVKLADFGVSAQL 151 (262)
T ss_pred EEEeCCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECC-CCCEEECccccchhh
Confidence 99999996 55444433 23578999999999999999999999 79999999999999996 788999999998765
Q ss_pred ccCC-CcceeeccccccChhhhhCC--CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|.+||...+.......+....-.+.
T Consensus 152 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 224 (262)
T cd06613 152 TATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP------- 224 (262)
T ss_pred hhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc-------
Confidence 4332 22345678889999998654 1478899999999999999999999988765554443322100000
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 319 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~ 319 (376)
.......++.++.+++.+||..||.+|||+.+++.|||
T Consensus 225 -----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 -----------------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred -----------------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00012245788999999999999999999999999998
No 218
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-43 Score=324.30 Aligned_cols=248 Identities=31% Similarity=0.467 Sum_probs=203.5
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHh-CCCCCeeecceeeeecCCCCceeE
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL-MDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~-l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.+...++|.+...+|.|+|+.|-.+.+..+++.+++|++.+......+|+.++.. -+||||+++++.+ .+....
T Consensus 317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~ 391 (612)
T KOG0603|consen 317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEI 391 (612)
T ss_pred cCCcchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeeccee-----cCCcee
Confidence 3346788999999999999999999999999999999998876666677765554 4799999999998 777789
Q ss_pred EEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+|||.+.|+ +++-+. ....+. ..+..|+.+|+.|+.|||+ +|++||||||+|||++.+.+.++|+|||.++.
T Consensus 392 ~~v~e~l~g~ell~ri~----~~~~~~-~e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIR----SKPEFC-SEASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeeehhccccHHHHHHH----hcchhH-HHHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 9999999975 222222 223333 6777899999999999999 79999999999999953478899999999986
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ..+.+-|..|.|||++. ...|+.++||||||++||+|++|+.||...... .++..+++.+.
T Consensus 466 ~~~~--~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~--------- 530 (612)
T KOG0603|consen 466 LERS--CDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPK--------- 530 (612)
T ss_pred Cchh--hcccchhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCc---------
Confidence 6444 23345588899999997 456999999999999999999999999877665 33344433332
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
+...+|.+++|||++||++||.+|+++.+++.||||
T Consensus 531 ------------------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 531 ------------------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ------------------cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 224689999999999999999999999999999999
No 219
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-41 Score=307.79 Aligned_cols=263 Identities=26% Similarity=0.423 Sum_probs=204.1
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|+..+.||.|++|.||+|.+..+++.+|+|.+..... ...+|+++++.++||||+++++++.. .....+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 469999999999999999999999999999998865322 34579999999999999999998754 3344588
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|.+.+.........+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++...
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~~ 155 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTR-KGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEec-CCeEEEeeccccccc
Confidence 99999985 6766665544456778999999999999999999999 79999999999999996 778999999998754
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA-----VDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~ 262 (376)
..... ....++..|+|||.+.+. .++.++|+|||||++|+|++|..||..... .+....+.. .....+
T Consensus 156 ~~~~~-~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~- 228 (287)
T cd06621 156 VNSLA-GTFTGTSFYMAPERIQGK-PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPEL- 228 (287)
T ss_pred ccccc-ccccCCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhh-
Confidence 33221 234568889999998654 489999999999999999999999976521 111111111 000000
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
+ .. .......++.+.++|.+||..||++|||+.|++.||||++...
T Consensus 229 -----------~---~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 229 -----------K---DE---PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred -----------c---cC---CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 0 00 0000124678999999999999999999999999999976543
No 220
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-42 Score=337.14 Aligned_cols=284 Identities=19% Similarity=0.275 Sum_probs=198.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCc-EEEEE------------------Eeccc---ccchHHHHHHHHhCCCCCee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGE-TVAIK------------------KVLQD---RRYKNRELQLMRLMDHPNVI 90 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~-~~aiK------------------~~~~~---~~~~~~e~~~l~~l~h~~Iv 90 (376)
.++|++.+.||+|+||+||+|..+.... ..+.| .+... .....+|+.+++.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4689999999999999999987654322 22222 11111 12235799999999999999
Q ss_pred ecceeeeecCCCCceeEEEEeecccchHHHHHHhhh-hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeee
Q 017139 91 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYS-SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 169 (376)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill 169 (376)
++++++ ......|+|++++.+++...+.... ..........++.++.||+.||+|||+ +||+||||||+|||+
T Consensus 227 ~l~~~~-----~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~NILl 300 (501)
T PHA03210 227 KIEEIL-----RSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLENIFL 300 (501)
T ss_pred cEeEEE-----EECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEE
Confidence 999998 3444588999999988877765422 112334567788999999999999999 799999999999999
Q ss_pred cCCCCcEEEEecCCccccccCCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCC-CCC--CChHH
Q 017139 170 DPLTHQVKLCDFGSAKVLVKGEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPL-FPG--ENAVD 244 (376)
Q Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~p-f~~--~~~~~ 244 (376)
+. ++.+||+|||++........ .....|+..|+|||++.+. .++.++|||||||++|+|++|..+ |.. .....
T Consensus 301 ~~-~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 301 NC-DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD-GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred CC-CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCC-CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 96 78899999999986644322 2345789999999999765 489999999999999999998754 432 23445
Q ss_pred HHHHHHHhcCCCCHHHHhh---cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 245 QLVEIIKVLGTPTREEIRC---MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
.+.+++...+....+.... .........+...............++.++.++|.+||++||.+|||+.|+|+||||.
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~ 458 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS 458 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence 5656555544322211000 0000000000000000000111124678899999999999999999999999999998
Q ss_pred ccc
Q 017139 322 ELR 324 (376)
Q Consensus 322 ~~~ 324 (376)
...
T Consensus 459 ~~~ 461 (501)
T PHA03210 459 AEE 461 (501)
T ss_pred cCC
Confidence 754
No 221
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-41 Score=302.42 Aligned_cols=248 Identities=26% Similarity=0.433 Sum_probs=204.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||+|+||.||++.+..+|+.||+|.+.... ....+|+.+++.++||||+++.+++ .+....+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 5999999999999999999999999999999885431 2345689999999999999999988 5556789
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+.+ +|.+.+... ....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~-~~~~~l~d~~~~~~~ 151 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTK-DGTIKLGDFGIARVL 151 (256)
T ss_pred EEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcC-CCCEEEeeccceeec
Confidence 99999985 666665432 23467899999999999999999999 79999999999999996 778999999998765
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....+++.|+|||.+.+.. ++.++|+|||||++|+|++|..||...+..+....+.... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~--~---------- 218 (256)
T cd08218 152 NSTVELARTCIGTPYYLSPEICENRP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS--Y---------- 218 (256)
T ss_pred CcchhhhhhccCCccccCHHHhCCCC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC--C----------
Confidence 43322 12345788899999986654 7899999999999999999999998777666655543311 0
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...+..++.++.++|.+||+.+|++||++.++++||||
T Consensus 219 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 219 ----------------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ----------------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 00233568899999999999999999999999999997
No 222
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=316.72 Aligned_cols=243 Identities=26% Similarity=0.374 Sum_probs=200.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
..+.+++.||+|-||.||.|..+.+ ..||+|.+.... ....+|+++|+.|+|+|||++++++.... -+|||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-----piyIV 279 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-----PIYIV 279 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCC-----ceEEE
Confidence 3456688999999999999998543 378999886532 33458999999999999999999984333 48999
Q ss_pred eeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||++ |+|+++|+. ..+..+...+...++.||++|++||++ +++|||||...|||++. +..+||+|||+|+...+
T Consensus 280 tE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~-~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDE-DLVVKISDFGLARLIGD 355 (468)
T ss_pred EEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeecc-CceEEEcccccccccCC
Confidence 99999 788888886 346779999999999999999999999 79999999999999996 88999999999995433
Q ss_pred CCCcce--eeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 190 GEANIS--YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 190 ~~~~~~--~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
+.-... ..-..-|.|||.+... .++.+||||||||+||||+| |+.||.+.+..+.+..+.+...
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~-~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR------------ 422 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYG-KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR------------ 422 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhC-CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc------------
Confidence 322111 1225569999999765 49999999999999999998 9999999999888887765322
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
.| -|...|+++-+++..||..+|++|||.+.+.
T Consensus 423 ------lp----------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 423 ------LP----------RPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ------CC----------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 22 2456899999999999999999999998653
No 223
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.6e-42 Score=311.74 Aligned_cols=255 Identities=28% Similarity=0.415 Sum_probs=203.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
+.|.....||.|+||.||++.+..+++.||||.+.... ....+|+.+++.++|+||+++++.+ ......|+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~-----~~~~~~~l 96 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY-----LVGDELWV 96 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhe-----ecCCeEEE
Confidence 45666788999999999999999999999999885432 2344688999999999999999988 34455899
Q ss_pred Eeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
||||++++ |.+.+. ...+++..++.++.||+.||.|||+ +||+||||||+||+++. ++.++|+|||++....
T Consensus 97 v~e~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~-~~~~kL~dfg~~~~~~ 169 (292)
T cd06658 97 VMEFLEGGALTDIVT-----HTRMNEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTS-DGRIKLSDFGFCAQVS 169 (292)
T ss_pred EEeCCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcC-CCCEEEccCcchhhcc
Confidence 99999874 444332 2468999999999999999999999 79999999999999996 7889999999987543
Q ss_pred cCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
... ......++..|+|||.+.+. .++.++|+||+|+++|+|++|..||...+.......+........
T Consensus 170 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 238 (292)
T cd06658 170 KEVPKRKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV---------- 238 (292)
T ss_pred cccccCceeecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc----------
Confidence 222 22345678999999998654 489999999999999999999999987766554443332111000
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCCC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 327 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~~ 327 (376)
.....++..+.+++.+||..||++|||++++++||||+....+.
T Consensus 239 ----------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 239 ----------------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred ----------------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 01124688999999999999999999999999999999766554
No 224
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.2e-41 Score=304.76 Aligned_cols=250 Identities=30% Similarity=0.483 Sum_probs=198.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.+|++.+.||+|+||.||.|.+..+++.||+|.+.... ....+|+.+++.+.||||+++++++.. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---PME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---CCC
Confidence 46999999999999999999999999999999875321 123468999999999999999987632 223
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..++++|||+++ +|.+.+.. ...+++..+..++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~Dfg~ 152 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDS-VGNVKLGDFGA 152 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecC-CCCEEECcCcc
Confidence 468899999985 66655543 3458899999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCC----CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 184 AKVLVKGE----ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 184 ~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
+....... ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+......+... .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~-- 226 (265)
T cd06652 153 SKRLQTICLSGTGMKSVTGTPYWMSPEVISGE-GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPT-- 226 (265)
T ss_pred ccccccccccccccccCCCCccccChhhhcCC-CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCC--
Confidence 87543211 12234578899999998764 489999999999999999999999987655444433221 110
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
....+..++..+.++|.+|+. +|++||+++++++|||+.
T Consensus 227 ----------------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 227 ----------------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ----------------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 111334568889999999995 999999999999999984
No 225
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.1e-41 Score=301.47 Aligned_cols=248 Identities=33% Similarity=0.506 Sum_probs=205.5
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||.|+||.||.+++..+++.+++|.+.... ....+|+++++.++|+||+++++++ .+...++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHF-----MDDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEE-----ecCCeEE
Confidence 5999999999999999999999999999999875432 2344799999999999999999998 4445689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++||||++ +|.+.+.... ...+++..+..++.|++.+|.|||+ .|++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 ~~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~-~~~~kl~d~~~~~~~ 151 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTK-AGLIKLGDFGISKIL 151 (256)
T ss_pred EEEEecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeC-CCCEEECcCcceEEc
Confidence 99999985 7776665422 3568999999999999999999999 79999999999999996 778999999998765
Q ss_pred ccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ......+++.|+|||.+.+.. ++.++|+|||||++|+|++|..||...+..+....+... ...
T Consensus 152 ~~~~~~~~~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~--------- 219 (256)
T cd08221 152 GSEYSMAETVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT--------- 219 (256)
T ss_pred ccccccccccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC---------
Confidence 4433 223456789999999987654 789999999999999999999999887766666555431 110
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..+..++.++.+++.+||..||++||++.++++|||+
T Consensus 220 -----------------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 -----------------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -----------------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0113468899999999999999999999999999996
No 226
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-44 Score=321.83 Aligned_cols=258 Identities=25% Similarity=0.411 Sum_probs=227.2
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
..+..++..||-|+||.|=+++.+.....+|+|++++... ....|..+|.....|+||++|..| .++.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~k 493 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSK 493 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccch
Confidence 3467788899999999999998877666799998865432 223588999999999999999999 8899
Q ss_pred eEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
++|++||-|-| .++..+.. .+.|++...+.++..++.|++|||+ +||++|||||+|++++. +|-+||.|||+|
T Consensus 494 yvYmLmEaClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~-k~iIYRDLKPENllLd~-~Gy~KLVDFGFA 567 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHR-KGIIYRDLKPENLLLDN-RGYLKLVDFGFA 567 (732)
T ss_pred hhhhhHHhhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHh-cCceeccCChhheeecc-CCceEEeehhhH
Confidence 99999999975 67777765 5789999999999999999999999 89999999999999996 888999999999
Q ss_pred cccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
+....+....+++|||.|.|||+++... .+.++|.||||+++|||++|.+||.+.++...+..|++.+..
T Consensus 568 Kki~~g~KTwTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~--------- 637 (732)
T KOG0614|consen 568 KKIGSGRKTWTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK--------- 637 (732)
T ss_pred HHhccCCceeeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh---------
Confidence 9999999999999999999999998765 899999999999999999999999999999999988874221
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-----HHHHhCCCccccccCCCCC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-----ALEACAHPFFDELREPNAR 329 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~~~~~~~~~~~ 329 (376)
..+|+.++..+.+||+++...+|.+|.. +.++..|-||...+|...+
T Consensus 638 ------------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr 689 (732)
T KOG0614|consen 638 ------------------IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLR 689 (732)
T ss_pred ------------------hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhh
Confidence 1156789999999999999999999986 7899999999999987533
No 227
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.2e-41 Score=311.06 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=204.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||++.+..+++.|++|.+.... ....+|+++++.++||||+++++.+ ..+..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 46999999999999999999999999999999886542 1233688999999999999999887 44556
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+++||||++| +|.+.+.. ...+++..+..++.|++.||.|||+ +|++||||||+||+++. ++.++|+|||+++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~-~~~~~l~dfg~~~ 149 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITS-MGHIKLTDFGLSK 149 (305)
T ss_pred EEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECC-CCCEEEeeCCCcc
Confidence 8999999986 66666543 3568999999999999999999999 79999999999999986 7889999999886
Q ss_pred ccccCC----------------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 017139 186 VLVKGE----------------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 249 (376)
Q Consensus 186 ~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~ 249 (376)
...... ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||.+.+..+....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~ 228 (305)
T cd05609 150 IGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ-GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 228 (305)
T ss_pred ccCcCccccccccccccchhhccccCCccCccccCchhccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 421100 01123467789999998654 4899999999999999999999999887766555544
Q ss_pred HHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC---HHHHhCCCccccccCC
Q 017139 250 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELREP 326 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~~~~~~~~ 326 (376)
...... .+. ....++.++.++|.+||..||++||+ +.++++||||...++.
T Consensus 229 ~~~~~~-----------------~~~---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 229 ISDDIE-----------------WPE---------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred HhcccC-----------------CCC---------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHH
Confidence 331100 000 11246889999999999999999998 7899999999876654
No 228
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-44 Score=300.14 Aligned_cols=292 Identities=33% Similarity=0.554 Sum_probs=231.3
Q ss_pred CCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 28 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 28 ~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
-+|...-+.+-.+.||.|+||.||.+.+..+|+.||+|++..-. +..-+|.++|..++|.|++...++.-...-
T Consensus 47 h~Pqqq~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~ 126 (449)
T KOG0664|consen 47 HPPQQQQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANP 126 (449)
T ss_pred CCccccccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCc
Confidence 34555666777899999999999999999999999999985432 233479999999999999998887632221
Q ss_pred CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 102 KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
.-...+|+++|.+..+|...+ -..+.++.+.++-+++||+.||+|||+ .+|.||||||.|.|+++ +..+|||||
T Consensus 127 dfFqEiYV~TELmQSDLHKII----VSPQ~Ls~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNS-NCvLKICDF 200 (449)
T KOG0664|consen 127 SFFQELYVLTELMQSDLHKII----VSPQALTPDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNS-NCILKICDF 200 (449)
T ss_pred hHHHHHHHHHHHHHhhhhhee----ccCCCCCcchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEecc-CceEEeccc
Confidence 112236788888876654444 346889999999999999999999999 79999999999999997 889999999
Q ss_pred CCccccccCCCc--ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 182 GSAKVLVKGEAN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 182 g~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
|+++....+... +..+.|.+|+|||++.+...|+.+.||||.|||+.||+..+..|...++.+++..|.+.+|+|+-+
T Consensus 201 GLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~E 280 (449)
T KOG0664|consen 201 GLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQE 280 (449)
T ss_pred ccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHH
Confidence 999987554432 334569999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcCCcCccCCCCCCCCccccc-----ccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVF-----HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.+....++........-...+-...+ +..-..+..+++.++|.+||++|++.++++.|++..+.+.
T Consensus 281 aMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 281 AMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRL 351 (449)
T ss_pred HHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccce
Confidence 88754443322211111111111111 1234457889999999999999999999999999977643
No 229
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-43 Score=320.36 Aligned_cols=236 Identities=27% Similarity=0.425 Sum_probs=202.3
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeeccc-ch
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ET 117 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~-g~ 117 (376)
++-||+|+.|.||+++. .++.||||++.. ..+.+++-|+.|+||||+.+.+++ .....+|||||||. |-
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~e---lkETdIKHLRkLkH~NII~FkGVC-----tqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRE---LKETDIKHLRKLKHPNIITFKGVC-----TQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhh---hhhhhHHHHHhccCcceeeEeeee-----cCCceeEEeeecccccc
Confidence 45699999999999987 678999997743 345689999999999999999999 55666999999999 67
Q ss_pred HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCcceee
Q 017139 118 MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 197 (376)
Q Consensus 118 l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 197 (376)
|+..|+. +..++......|..+|+.|+.|||. +.|||||||.-||||.. +..|||+|||.++...+.....+++
T Consensus 199 L~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~-~d~VKIsDFGTS~e~~~~STkMSFa 272 (904)
T KOG4721|consen 199 LYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHL-HKIIHRDLKSPNILISY-DDVVKISDFGTSKELSDKSTKMSFA 272 (904)
T ss_pred HHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHH-hhHhhhccCCCceEeec-cceEEeccccchHhhhhhhhhhhhh
Confidence 8887775 6789999999999999999999999 79999999999999996 7789999999999887777778899
Q ss_pred ccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCC
Q 017139 198 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIK 277 (376)
Q Consensus 198 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (376)
||..|||||++... .++.++|||||||+||||+||..||.+.+....+ -.. .
T Consensus 273 GTVaWMAPEvIrne-PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII----wGV-----------------------G 324 (904)
T KOG4721|consen 273 GTVAWMAPEVIRNE-PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII----WGV-----------------------G 324 (904)
T ss_pred hhHhhhCHHHhhcC-CcccccceehhHHHHHHHHhcCCCccccchheeE----Eec-----------------------c
Confidence 99999999999765 4999999999999999999999999876543221 111 2
Q ss_pred CCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCC
Q 017139 278 AHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 318 (376)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp 318 (376)
...++...|...+..++-||++||.-.|..||+..++|.|-
T Consensus 325 sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 325 SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 22334446677899999999999999999999999999884
No 230
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-41 Score=307.28 Aligned_cols=247 Identities=26% Similarity=0.379 Sum_probs=191.3
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHH---hCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 41 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMR---LMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~---~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.||+|+||.||+|.+..+++.+|+|.+.+... ...+|..+++ ...||||+.+++.+ .....+++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAF-----HTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE-----ecCCeEEEE
Confidence 48999999999999999999999998854321 1123333333 34799999998888 334458899
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+++ +|...+.. ...+++..+..++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||++.....
T Consensus 76 ~e~~~~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~-~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 76 LDLMNGGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDE-HGHVRISDLGLACDFSK 149 (279)
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECC-CCCEEEccCCcceeccc
Confidence 999996 55544443 4569999999999999999999999 79999999999999996 77899999999865433
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV--DQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.. .....++..|+|||.+.+...++.++|+||+||++|+|++|..||...... .........
T Consensus 150 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--------------- 213 (279)
T cd05633 150 KK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--------------- 213 (279)
T ss_pred cC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc---------------
Confidence 22 233468999999999865455789999999999999999999999754322 111111100
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCCC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPN 327 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~~ 327 (376)
....++..++.++.++|.+||..||++|+ |+.++++||||+.+++..
T Consensus 214 -------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~ 265 (279)
T cd05633 214 -------------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQ 265 (279)
T ss_pred -------------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhH
Confidence 01113445789999999999999999999 699999999999876543
No 231
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1e-41 Score=304.96 Aligned_cols=251 Identities=30% Similarity=0.507 Sum_probs=201.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|++.+.||.|+||.||+|.+..+++.+|+|.+..... ...+|+++++.++||||+++++.+ .....++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF-----YNNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheee-----ecCCEEE
Confidence 468999999999999999999999999999998865432 234688999999999999999988 4446689
Q ss_pred EEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+++||++ ++|.+.+... ...+++..+..++.|++.||+|||+..|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~-~~~~~l~d~g~~~~~ 151 (265)
T cd06605 76 ICMEYMDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS-RGQIKLCDFGVSGQL 151 (265)
T ss_pred EEEEecCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC-CCCEEEeecccchhh
Confidence 9999999 4776666542 2678999999999999999999999239999999999999996 778999999998765
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-----AVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~ 262 (376)
...... ...++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+ ..+....+... ..
T Consensus 152 ~~~~~~-~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~----- 221 (265)
T cd06605 152 VNSLAK-TFVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE---PP----- 221 (265)
T ss_pred HHHHhh-cccCChhccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC---CC-----
Confidence 332222 26678899999998665 58999999999999999999999997652 11222221110 00
Q ss_pred hcCcCCcCccCCCCCCCCccccccc-CCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
+ ..+. .++.++.++|.+||..||++|||+.+++.||||+.+
T Consensus 222 -----------~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 222 -----------P---------RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred -----------C---------CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 0 0111 268899999999999999999999999999999865
No 232
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.5e-41 Score=303.73 Aligned_cols=252 Identities=31% Similarity=0.535 Sum_probs=199.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc--------------cchHHHHHHHHhCCCCCeeecceeeeecC
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------------RYKNRELQLMRLMDHPNVISLKHCFFSTT 100 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~ 100 (376)
+|.+.+.||.|+||.||+|.+..+|+.+|+|.+.... ....+|+.+++.++||||+++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~---- 77 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE---- 77 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe----
Confidence 5999999999999999999999999999999874311 1234688999999999999999987
Q ss_pred CCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEE
Q 017139 101 SKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLC 179 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~ 179 (376)
.....+++||||+++ +|.+.+.. ...+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+
T Consensus 78 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~-~~~~~l~ 150 (272)
T cd06629 78 -TTEEYLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDA-DGICKIS 150 (272)
T ss_pred -ccCCceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcC-CCeEEEe
Confidence 444568899999985 66665544 3578999999999999999999999 79999999999999996 7889999
Q ss_pred ecCCccccccCC---CcceeeccccccChhhhhCCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q 017139 180 DFGSAKVLVKGE---ANISYICSRYYRAPELIFGAT-EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 255 (376)
Q Consensus 180 Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~ 255 (376)
|||++....... ......++..|+|||.+.... .++.++|+||||+++|++++|..||...+.......+......
T Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 230 (272)
T cd06629 151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA 230 (272)
T ss_pred eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC
Confidence 999987653321 122345688899999986543 3788999999999999999999999765544333322111000
Q ss_pred CCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 256 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..+.......++.++.++|.+||..||++|||++++++||||
T Consensus 231 -----------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 231 -----------------------PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred -----------------------CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 000111223468999999999999999999999999999997
No 233
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.4e-41 Score=303.36 Aligned_cols=246 Identities=33% Similarity=0.526 Sum_probs=195.0
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHH-HHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQ-LMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~-~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||.|+||.||+|.+..+++.||+|.+..... ....|.. +....+|+||+++++++ ..+..+|+|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence 579999999999999999999999999864321 1122333 33455899999999988 4455689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+++ +|...+.. ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++.....
T Consensus 77 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~~- 149 (260)
T cd05611 77 EYLNGGDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQ-TGHLKLTDFGLSRNGLE- 149 (260)
T ss_pred eccCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECC-CCcEEEeecccceeccc-
Confidence 99986 66655543 3568999999999999999999999 79999999999999996 77899999999875433
Q ss_pred CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 191 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 191 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
.....++..|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+.......+......
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 211 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN--------------- 211 (260)
T ss_pred --cccCCCCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC---------------
Confidence 22345788899999987654 899999999999999999999999887765554443321000
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC---HHHHhCCCccccccC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELRE 325 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~~~~~~~ 325 (376)
+.......++.++.++|.+||+.||++||+ ++|++.||||++++|
T Consensus 212 ----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 212 ----------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred ----------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 011122347899999999999999999995 579999999998765
No 234
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.6e-41 Score=309.14 Aligned_cols=250 Identities=30% Similarity=0.452 Sum_probs=202.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ....+|+++++.++||||+++++++.. ...
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-----EHT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----CCe
Confidence 46999999999999999999999999999999885432 123468899999999999999999843 344
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.|+||||+.|++.+.+... ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++..
T Consensus 90 ~~lv~e~~~g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~-~~~~kL~dfg~~~~ 164 (307)
T cd06607 90 AWLVMEYCLGSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTE-PGTVKLADFGSASL 164 (307)
T ss_pred EEEEHHhhCCCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECC-CCCEEEeecCccee
Confidence 8899999999877766532 3468999999999999999999999 79999999999999996 78899999999875
Q ss_pred cccCCCcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 187 LVKGEANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.... ....+++.|+|||.+.+ ...++.++|+||||+++|+|++|..||.+.+.......+... ..+
T Consensus 165 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~-------- 232 (307)
T cd06607 165 VSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSP-------- 232 (307)
T ss_pred cCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-CCC--------
Confidence 4322 24567889999998742 234788999999999999999999999877655544332211 000
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
. ......+.++.++|.+||..||++||++.+++.||||..-
T Consensus 233 ----------~--------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 233 ----------T--------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred ----------C--------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 0 0112357889999999999999999999999999999863
No 235
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.1e-41 Score=302.40 Aligned_cols=249 Identities=27% Similarity=0.374 Sum_probs=193.3
Q ss_pred ccceEeeeee--ccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVV--GTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~L--g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|.+.+.+ |+|+||.||++.+..+++.+|+|.+....... .|......+ +||||+++++++. ....+|+
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~e~~~~~~~~~h~~iv~~~~~~~-----~~~~~~i 86 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-IEPMVHQLMKDNPNFIKLYYSVT-----TLKGHVL 86 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-hhHHHHHHhhcCCCEEEEEEEEe-----cCCeeEE
Confidence 3467777666 99999999999999999999999986543221 233333323 7999999999983 3446899
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
||||+++ +|.+.+.. +..+++..++.++.|++.||.|||+ .|++||||+|+||+++.+++.++|+|||++....
T Consensus 87 v~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 87 IMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred EEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 9999985 77666654 3479999999999999999999999 7999999999999999744389999999987653
Q ss_pred cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ-LVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.. ....++..|+|||++.+.. ++.++|+||+||++|+|++|..||........ ...+......
T Consensus 162 ~~---~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------------ 225 (267)
T PHA03390 162 TP---SCYDGTLDYFSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK------------ 225 (267)
T ss_pred CC---ccCCCCCcccChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc------------
Confidence 22 2346788999999997654 89999999999999999999999985543321 1111111100
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC-HHHHhCCCcccc
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT-ALEACAHPFFDE 322 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~ell~hp~~~~ 322 (376)
.....+.+++.+.+||.+||+.||.+|++ .+++|+||||++
T Consensus 226 --------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 --------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred --------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 00122357999999999999999999996 599999999963
No 236
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.7e-41 Score=318.01 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=192.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC-----CcEEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTTS 101 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~ 101 (376)
.++|.+.+.||+|+||.||+|.+... +..||+|.+.... ....+|+.+++.+ +|+||+++++++
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~----- 111 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC----- 111 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe-----
Confidence 45899999999999999999986543 3579999986542 2234699999999 899999999988
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhhh-----------------------------------------------------
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYSS----------------------------------------------------- 127 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~~----------------------------------------------------- 127 (376)
.....+++|||||++ +|.+.+.....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 444558999999984 77766643210
Q ss_pred -------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc-
Q 017139 128 -------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN- 193 (376)
Q Consensus 128 -------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~- 193 (376)
...++++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~-~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTD-GRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeC-CCeEEEeeceeeeeccCCccee
Confidence 12357889999999999999999999 79999999999999995 788999999998765433221
Q ss_pred --ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 194 --ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 194 --~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
....++..|+|||++.+. .++.++|||||||++|+|++ |..||..................
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~--------------- 333 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ--------------- 333 (374)
T ss_pred eccCCCCccceeCHHHhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC---------------
Confidence 112235679999998654 48999999999999999997 99999876544433333321000
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+..+++++.+++.+||+.||++|||+.++++
T Consensus 334 ------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 334 ------------MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ------------ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0022346889999999999999999999999864
No 237
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.8e-41 Score=299.80 Aligned_cols=249 Identities=28% Similarity=0.436 Sum_probs=202.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||.|+||.||+|.++.+|..+|+|.+... .....+|+.+++.++|+||+++++.+ .....++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 589999999999999999999999999999998543 22345799999999999999999988 4555689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|+||+++ +|.+.+... ....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++..+||+|||.+...
T Consensus 76 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~ 152 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQL 152 (257)
T ss_pred EEEecCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEecccccchhc
Confidence 99999985 666666432 23457999999999999999999999 799999999999999875566899999998765
Q ss_pred ccCCCc-ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEAN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
...... ....+++.|+|||.+.+. .++.++|+||||+++|+|++|..||...+.......+....
T Consensus 153 ~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------- 218 (257)
T cd08225 153 NDSMELAYTCVGTPYYLSPEICQNR-PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY------------- 218 (257)
T ss_pred cCCcccccccCCCccccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-------------
Confidence 433221 234578889999988654 48899999999999999999999998776555444332210
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
. ......++.++.++|.+||..+|++|||+.++++||||
T Consensus 219 ------~---------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 ------F---------APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ------C---------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 0 00123468899999999999999999999999999997
No 238
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.1e-42 Score=309.11 Aligned_cols=250 Identities=26% Similarity=0.394 Sum_probs=201.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+.|...+.||+|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++ .++..+|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLW 78 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceE
Confidence 45888899999999999999999999999999886432 2345799999999999999999988 4455689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|.+.+. ...+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~-~~~~~l~dfg~~~~~ 151 (277)
T cd06642 79 IIMEYLGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSE-QGDVKLADFGVAGQL 151 (277)
T ss_pred EEEEccCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeC-CCCEEEccccccccc
Confidence 99999996 5544443 2568999999999999999999999 79999999999999986 788999999998765
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+...
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-------------- 216 (277)
T cd06642 152 TDTQIKRNTFVGTPFWMAPEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-------------- 216 (277)
T ss_pred cCcchhhhcccCcccccCHHHhCcC-CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC--------------
Confidence 43322 2234578889999998665 4889999999999999999999999765543333221110
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
....+...++.++.++|.+||..+|++||++.++++||||..+.
T Consensus 217 --------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 217 --------------SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred --------------CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 00012234678999999999999999999999999999998754
No 239
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.4e-41 Score=304.90 Aligned_cols=247 Identities=26% Similarity=0.389 Sum_probs=193.1
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEecccccc-------hHHHH---HHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 41 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-------KNREL---QLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-------~~~e~---~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.||+|+||.||+|.+..+++.||+|.+.+.... ...|. .+++...||||+.+++++ .+...+|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 489999999999999999999999988653211 11232 344456899999998888 445568999
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+.| +|...+. ....+++..++.++.|++.||.|||+ .+++||||||+||+++. ++.++|+|||++.....
T Consensus 76 ~e~~~g~~L~~~l~----~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~-~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 76 LDLMNGGDLHYHLS----QHGVFSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDE-HGHVRISDLGLACDFSK 149 (278)
T ss_pred EecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECC-CCCEEEccCcCccccCc
Confidence 999986 4444443 24679999999999999999999999 79999999999999996 77899999999875433
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHhcCCCCHHHHhhcCcC
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ--LVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
. ......|+..|+|||.+.+...++.++|+||+||++|+|++|..||........ .......
T Consensus 150 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------- 213 (278)
T cd05606 150 K-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--------------- 213 (278)
T ss_pred c-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc---------------
Confidence 2 223456899999999987554588999999999999999999999987632211 1111100
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCCC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREPN 327 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~~ 327 (376)
....++..++.++.+++.+||..||++|+ ++.++++||||+...+..
T Consensus 214 -------------~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~ 265 (278)
T cd05606 214 -------------MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQM 265 (278)
T ss_pred -------------cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchH
Confidence 00113345689999999999999999999 999999999999887654
No 240
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2e-41 Score=305.24 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=202.1
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
..|+..+.||.|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++||||+++++++ .++..+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCEEE
Confidence 35888999999999999999999999999999886432 2344688999999999999999998 4455699
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||++| +|.+.+.. ..+++..+..++.|++.||+|||+ .+++|+||+|+||+++. ++.++|+|||++...
T Consensus 79 lv~e~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~-~~~~~l~dfg~~~~~ 151 (277)
T cd06640 79 IIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSE-QGDVKLADFGVAGQL 151 (277)
T ss_pred EEEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcC-CCCEEEcccccceec
Confidence 99999986 66555542 468899999999999999999999 79999999999999996 778999999998765
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+.......+... .
T Consensus 152 ~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~------------ 217 (277)
T cd06640 152 TDTQIKRNTFVGTPFWMAPEVIQQS-AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN-N------------ 217 (277)
T ss_pred cCCccccccccCcccccCHhHhccC-CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC-C------------
Confidence 43322 2234568889999998655 4799999999999999999999999876654433222110 0
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
...+...++..+.+++.+||..||++||+++++++||||...
T Consensus 218 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 218 ---------------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred ---------------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 001223467889999999999999999999999999999764
No 241
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.3e-41 Score=299.52 Aligned_cols=251 Identities=31% Similarity=0.489 Sum_probs=205.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
++|.+.+.||.|++|.||+|.+..+++.|++|++.... .....|+..+..++|+||+++++++ .....++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF-----YKEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----ccCCeEE
Confidence 36899999999999999999999999999999986653 2345788999999999999999988 4445689
Q ss_pred EEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc-CCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 109 LVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT-VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 109 lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+||||++ ++|.+.+.. ...+++..++.++.|++.||.|||+ . |++|+||+|+||+++. ++.++|+|||.+..
T Consensus 76 lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~-~~~~~l~df~~~~~ 149 (264)
T cd06623 76 IVLEYMDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINS-KGEVKIADFGISKV 149 (264)
T ss_pred EEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECC-CCCEEEccCcccee
Confidence 9999999 466666654 3678999999999999999999998 6 9999999999999996 78899999999887
Q ss_pred cccCCCcc-eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCCHHHHh
Q 017139 187 LVKGEANI-SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 187 ~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~ 262 (376)
........ ...++..|+|||.+.+. .++.++|+||||+++|+|++|..||...+ ..+....+... ..
T Consensus 150 ~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~------- 220 (264)
T cd06623 150 LENTLDQCNTFVGTVTYMSPERIQGE-SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG-PP------- 220 (264)
T ss_pred cccCCCcccceeecccccCHhhhCCC-CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC-CC-------
Confidence 65443332 45678899999998665 58899999999999999999999997764 22222222210 00
Q ss_pred hcCcCCcCccCCCCCCCCcccccccC-CChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKR-MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
...+.. ++..+.++|.+||..+|++||++.++++||||+..+
T Consensus 221 --------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 221 --------------------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred --------------------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence 001223 688999999999999999999999999999998754
No 242
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=6.7e-43 Score=315.74 Aligned_cols=282 Identities=32% Similarity=0.534 Sum_probs=228.4
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCC------CCCeeecceeeeecCCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMD------HPNVISLKHCFFSTTSK 102 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~------h~~Iv~~~~~~~~~~~~ 102 (376)
.-.+|.+....|+|-|++|.+|.+..-|+.||||++..... .-.+|+++|+.|+ .-|+++++..| .
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F-----~ 504 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF-----K 504 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh-----h
Confidence 33689999999999999999999999999999999977643 3347999999996 35889998888 6
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
...++|+|+|.+.-+|.++|+.+.. +-.|....++.++.|++.||..|.. .||+|.||||+|||++.....+||||||
T Consensus 505 hknHLClVFE~LslNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 505 HKNHLCLVFEPLSLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred hcceeEEEehhhhchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCcceeeeccCc
Confidence 6677999999999999999998754 5678999999999999999999999 6999999999999999888899999999
Q ss_pred CccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 183 SAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
.|.....+. .+.+..+.+|+|||+++|-. |+...|+||+||+||||.||+..|+|.++-+++...+..-|..+...+.
T Consensus 583 SA~~~~ene-itPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlR 660 (752)
T KOG0670|consen 583 SASFASENE-ITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLR 660 (752)
T ss_pred ccccccccc-ccHHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhh
Confidence 998765444 34667788999999999875 9999999999999999999999999999999999999999988876664
Q ss_pred hc-------CcCCc--CccCCCC----CCCCcccccc-----------cCCC-------hhHHHHHHhhcCCCCCCCCCH
Q 017139 263 CM-------NPNYT--DFRFPQI----KAHPWHKVFH-----------KRMP-------PEAIDLASRLLQYSPSLRCTA 311 (376)
Q Consensus 263 ~~-------~~~~~--~~~~~~~----~~~~~~~~~~-----------~~~~-------~~~~~li~~~L~~dP~~R~t~ 311 (376)
.. ....+ ......+ ....+..+-| ..++ ..+++||.+||..||++|.|+
T Consensus 661 KgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~ 740 (752)
T KOG0670|consen 661 KGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITV 740 (752)
T ss_pred hcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCH
Confidence 21 11110 0000000 0000000000 0122 358899999999999999999
Q ss_pred HHHhCCCcccc
Q 017139 312 LEACAHPFFDE 322 (376)
Q Consensus 312 ~ell~hp~~~~ 322 (376)
.++|.||||+.
T Consensus 741 nqAL~HpFi~~ 751 (752)
T KOG0670|consen 741 NQALKHPFITE 751 (752)
T ss_pred HHHhcCCcccC
Confidence 99999999974
No 243
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.5e-41 Score=298.03 Aligned_cols=250 Identities=30% Similarity=0.462 Sum_probs=207.0
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||.|+||.||+|.+..+++.+++|++..... ...+|+++++.++|||++++.+.+. .....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 58999999999999999999999999999999865432 3446899999999999999999884 335688
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|+|++++ +|...+......+..+++..+..++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~-~~~~~l~d~~~~~~~ 153 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTS-NGLVKLGDFGISKVL 153 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcC-CCcEEECCccceeec
Confidence 99999986 7777776644345789999999999999999999999 79999999999999996 788999999998766
Q ss_pred ccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ......+++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+.............
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------------ 220 (258)
T cd08215 154 SSTVDLAKTVVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY------------ 220 (258)
T ss_pred ccCcceecceeeeecccChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC------------
Confidence 4443 223456788999999986654 88999999999999999999999987765544444332110
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..++..++.++.+++.+||..||++|||+.++|+||||
T Consensus 221 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 ----------------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 01223578899999999999999999999999999997
No 244
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=303.79 Aligned_cols=240 Identities=17% Similarity=0.197 Sum_probs=192.9
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
..+|+|+++.||+|.. +|+.||+|.+.... ....+|+.++++++||||+++++++.... .+...+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 5799999999999987 78999999986542 22347999999999999999999885421 22345889999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCC
Q 017139 113 YVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE 191 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~ 191 (376)
||++ +|.+.+.. ...+++.....++.|++.||.|||+..+++||||||+||+++. ++.+||+|||+++.....
T Consensus 103 y~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~-~~~~kl~dfg~~~~~~~~- 176 (283)
T PHA02988 103 YCTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE-NYKLKIICHGLEKILSSP- 176 (283)
T ss_pred eCCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC-CCcEEEcccchHhhhccc-
Confidence 9996 56666543 4568899999999999999999997338999999999999996 788999999998765332
Q ss_pred CcceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 192 ANISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 192 ~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
.....++..|+|||++.+. ..++.++|||||||++|+|++|..||.+.+..+....+......+.
T Consensus 177 -~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------------- 242 (283)
T PHA02988 177 -PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK------------- 242 (283)
T ss_pred -cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-------------
Confidence 2345678899999998652 3589999999999999999999999998877666555443211110
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
++...++++.+++.+||+.||++|||++++++
T Consensus 243 --------------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 243 --------------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred --------------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 22346889999999999999999999999874
No 245
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.9e-41 Score=315.19 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=193.2
Q ss_pred cceEeeeeeccCCceEEEEEEE-----cCCCcEEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 34 ISYMAERVVGTGSFGIVFQAKC-----LETGETVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
++|++.+.||+|+||.||+|.+ ..++..||+|++.... ....+|+.+++.+ +||||+++++++ .
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~-----~ 109 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC-----T 109 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee-----c
Confidence 4899999999999999999974 3456789999986432 2234699999999 899999999988 4
Q ss_pred CceeEEEEeecccc-hHHHHHHhhhh------------------------------------------------------
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYSS------------------------------------------------------ 127 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~~------------------------------------------------------ 127 (376)
+....++|||||++ +|.+.+.....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 44558899999994 77777654211
Q ss_pred -----------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 128 -----------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 128 -----------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
....+++..+..++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTH-GRITKICDFGLARDIRND 267 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEEC-CCcEEEecCccceeccCc
Confidence 12357888999999999999999999 79999999999999996 778999999998765433
Q ss_pred CCc---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 191 EAN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 191 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||..........+.+.....
T Consensus 268 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------- 335 (375)
T cd05104 268 SNYVVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR----------- 335 (375)
T ss_pred ccccccCCCCCCcceeChhHhcCC-CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc-----------
Confidence 221 122335679999999765 48999999999999999998 89999876554444333321000
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...+...+.++.+++.+||+.||++|||+.++++.
T Consensus 336 ----------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 336 ----------------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 00123457899999999999999999999999753
No 246
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.2e-41 Score=306.68 Aligned_cols=253 Identities=20% Similarity=0.260 Sum_probs=191.7
Q ss_pred cceEeeeeeccCCceEEEEEEEcC----------------CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeec
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLE----------------TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISL 92 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~----------------~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~ 92 (376)
++|++.+.||+|+||.||+|.+.. ++..||+|.+.... ....+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 579999999999999999998642 34479999886532 234479999999999999999
Q ss_pred ceeeeecCCCCceeEEEEeecccc-hHHHHHHhhhh---------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCC
Q 017139 93 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSS---------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPG 156 (376)
Q Consensus 93 ~~~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~---------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ 156 (376)
++++. +...+++||||+.+ +|.+.+..... ....+++..++.++.||+.||.|||+ +|
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~ 158 (304)
T cd05096 85 LGVCV-----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS-LN 158 (304)
T ss_pred EEEEe-----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-CC
Confidence 99884 33448999999985 77776654211 11346788899999999999999999 79
Q ss_pred ceeccCCCCCeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-
Q 017139 157 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL- 232 (376)
Q Consensus 157 ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt- 232 (376)
|+||||||+|||++. ++.+||+|||+++....... .....++..|+|||++.+. .++.++|+|||||++|+|++
T Consensus 159 ivH~dlkp~Nill~~-~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 159 FVHRDLATRNCLVGE-NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG-KFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred ccccCcchhheEEcC-CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcC-CCCchhhhHHHHHHHHHHHHc
Confidence 999999999999996 78899999999876533221 1123346789999998765 48999999999999999987
Q ss_pred -CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH
Q 017139 233 -GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 311 (376)
Q Consensus 233 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 311 (376)
+..||...+..+....+......... ......+...+..+.+++.+||..||++|||+
T Consensus 237 ~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 237 CKEQPYGELTDEQVIENAGEFFRDQGR---------------------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred cCCCCCCcCCHHHHHHHHHHHhhhccc---------------------cccccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 56788877665554443321110000 00001123468899999999999999999999
Q ss_pred HHHh
Q 017139 312 LEAC 315 (376)
Q Consensus 312 ~ell 315 (376)
+++.
T Consensus 296 ~~i~ 299 (304)
T cd05096 296 SDIH 299 (304)
T ss_pred HHHH
Confidence 9984
No 247
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.2e-41 Score=306.16 Aligned_cols=254 Identities=28% Similarity=0.451 Sum_probs=202.7
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
..|.....||.|+||.||+|.+..+++.||+|.+.... ....+|+.+++.++||||+++++++. .+..+|+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~i 95 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWV 95 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEE
Confidence 34556678999999999999999999999999985422 23446889999999999999999883 3455899
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||+++ +|...+. ...+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||++....
T Consensus 96 v~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~-~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 96 LMEFLQGGALTDIVS-----QTRLNEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTL-DGRVKLSDFGFCAQIS 168 (297)
T ss_pred EEecCCCCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEcc-CCcEEEeechhHhhcc
Confidence 9999996 5544432 2568999999999999999999999 79999999999999996 7889999999987543
Q ss_pred cCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
... ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+..+.+..+... +.
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~---------- 234 (297)
T cd06659 169 KDVPKRKSLVGTPYWMAPEVISRT-PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PP---------- 234 (297)
T ss_pred cccccccceecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CC----------
Confidence 322 22345678999999998664 4899999999999999999999999877665554433211 00
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
+ .......++.++.++|.+||+.||++||+++++++||||.+...+
T Consensus 235 ------~-------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~ 280 (297)
T cd06659 235 ------P-------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLP 280 (297)
T ss_pred ------C-------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence 0 000123468899999999999999999999999999999876544
No 248
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.8e-41 Score=304.70 Aligned_cols=255 Identities=27% Similarity=0.431 Sum_probs=203.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
..++|.+.+.||+|+||.||++.+..++..+|+|.+..... ....|+.+++.++||||+++++.+. .....
T Consensus 17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~ 91 (293)
T cd06647 17 PKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDEL 91 (293)
T ss_pred chhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcE
Confidence 34789999999999999999999988999999998854322 2346888999999999999999884 34458
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|+|+||+++ +|.+.+.. ..+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++..
T Consensus 92 ~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~-~~~~kL~dfg~~~~ 164 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ 164 (293)
T ss_pred EEEEecCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcC-CCCEEEccCcceec
Confidence 899999985 66555543 457889999999999999999999 79999999999999996 77899999998865
Q ss_pred cccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 187 LVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 187 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
...... .....+++.|+|||.+.+. .++.++|+|||||++|++++|..||...+.......+.. .+.+
T Consensus 165 ~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~--------- 233 (293)
T cd06647 165 ITPEQSKRSTMVGTPYWMAPEVVTRK-AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP--------- 233 (293)
T ss_pred ccccccccccccCChhhcCchhhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCC---------
Confidence 543322 2234578889999998654 478999999999999999999999987665433322111 0000
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
....+..++..+.++|.+||..||++||++.+++.||||+..+.
T Consensus 234 ----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 234 ----------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred ----------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 00012346789999999999999999999999999999987553
No 249
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=8.2e-41 Score=297.51 Aligned_cols=245 Identities=28% Similarity=0.452 Sum_probs=199.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
+|++.+.||.|+||.||++.+..+++.+|+|.+.... .....|+.+++.++|+||+++++.+ .+...+|+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 5899999999999999999999999999999875322 2334688899999999999999988 45556899
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||+++ ++.+.+... ....+++..++.++.|++.||.+||+ +|++|+||||+||+++. ++.++|+|||.+....
T Consensus 76 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~~~ 151 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQ-NGKVKLGDFGSARLLT 151 (255)
T ss_pred EEeeCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECC-CCcEEEcccCcceeec
Confidence 9999985 666655432 24568999999999999999999999 79999999999999986 7889999999987654
Q ss_pred cCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.... .....+++.|+|||++.+. .++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 152 ~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~------------- 217 (255)
T cd08219 152 SPGAYACTYVGTPYYVPPEIWENM-PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY------------- 217 (255)
T ss_pred ccccccccccCCccccCHHHHccC-CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC-------------
Confidence 3322 2345678899999998664 489999999999999999999999987765554444332100
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..++..++..+.++|.+||+.||++|||+.++++-
T Consensus 218 ---------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 ---------------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---------------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 01233568899999999999999999999999864
No 250
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.7e-41 Score=301.74 Aligned_cols=251 Identities=28% Similarity=0.477 Sum_probs=200.6
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCC---CCCeeecceeeeecCCCCcee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMD---HPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~---h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.|.+.+.||.|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.+. |||++++++++ .++..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~-----~~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSY-----LKGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeee-----eeCCE
Confidence 4888999999999999999999999999999885432 23446888888886 99999999987 34456
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+|+||||+++ +|.+.+.. ..+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~ 149 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTN-TGNVKLCDFGVAA 149 (277)
T ss_pred EEEEEecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcC-CCCEEEccCCcee
Confidence 8999999986 55554432 368999999999999999999999 79999999999999996 8889999999987
Q ss_pred ccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 186 VLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 186 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
....... .....++..|+|||.+.+...++.++|+|||||++|+|++|..||.+.+.......+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~------------ 217 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS------------ 217 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC------------
Confidence 6644332 234467889999999876555789999999999999999999999876543322111100
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
..+. .....++.++.+++.+||..||++||++.+++.||||++..
T Consensus 218 -------~~~~--------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 218 -------KPPR--------LEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred -------CCCC--------CCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 0000 01113678999999999999999999999999999997643
No 251
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.7e-40 Score=301.02 Aligned_cols=258 Identities=24% Similarity=0.322 Sum_probs=199.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
..++|++.+.||+|+||.||+|.++. .+..||+|.+..... ...+|..+++.++||||+++++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~----- 78 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV----- 78 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 45789999999999999999997652 345799998764432 233588899999999999999987
Q ss_pred CCceeEEEEeeccc-chHHHHHHhhhhc------CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC
Q 017139 102 KDELFLNLVMEYVP-ETMYRVLKHYSSM------NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH 174 (376)
Q Consensus 102 ~~~~~~~lv~e~~~-g~l~~~l~~~~~~------~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~ 174 (376)
.+....|+||||++ |+|.+.+...... ...++...+..++.|++.||.|||+ +|++||||||+||+++. ++
T Consensus 79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili~~-~~ 156 (288)
T cd05061 79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMVAH-DF 156 (288)
T ss_pred cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEEcC-CC
Confidence 33445889999998 5777777653211 2345677888999999999999999 79999999999999996 78
Q ss_pred cEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 017139 175 QVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 250 (376)
Q Consensus 175 ~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~ 250 (376)
.++|+|||+++....... .....++..|+|||.+.+.. ++.++|+|||||++|+|++ |..||.+.+..+....+.
T Consensus 157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred cEEECcCCccccccccccccccCCCcccccccCHHHhccCC-CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 899999999875433221 11223466799999986544 8999999999999999998 789998876655444332
Q ss_pred HhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC------CCcccccc
Q 017139 251 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA------HPFFDELR 324 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~------hp~~~~~~ 324 (376)
.. +.+ ..+...++.+.+++.+||+.||++|||+.++++ ||||+.+.
T Consensus 236 ~~-~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 287 (288)
T cd05061 236 DG-GYL---------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS 287 (288)
T ss_pred cC-CCC---------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence 21 000 012345789999999999999999999999976 99998875
Q ss_pred C
Q 017139 325 E 325 (376)
Q Consensus 325 ~ 325 (376)
+
T Consensus 288 ~ 288 (288)
T cd05061 288 F 288 (288)
T ss_pred C
Confidence 4
No 252
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.8e-40 Score=304.30 Aligned_cols=250 Identities=30% Similarity=0.449 Sum_probs=202.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
+.|...+.||+|+||.||+|++..+++.+++|++.... ....+|+++++.++|||++++++++. +...
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 95 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-----KEHT 95 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCE
Confidence 34777889999999999999999999999999986432 12346889999999999999999984 4455
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.|+||||+.+++.+.+.. ....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||++..
T Consensus 96 ~~lv~e~~~~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~-~~~~kL~dfg~~~~ 170 (313)
T cd06633 96 AWLVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTE-PGQVKLADFGSASK 170 (313)
T ss_pred EEEEEecCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECC-CCCEEEeecCCCcc
Confidence 889999999987777654 24568999999999999999999999 79999999999999986 77899999998864
Q ss_pred cccCCCcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 187 LVKGEANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.. ......++..|+|||.+.. ...++.++|+|||||++|+|++|..||...+.......+.... .+
T Consensus 171 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~-------- 238 (313)
T cd06633 171 SS---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-SP-------- 238 (313)
T ss_pred cC---CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CC--------
Confidence 32 2234567889999999742 2347889999999999999999999998877655554443210 00
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
......++..+++|+.+||+.+|.+||++.+++.||||+..
T Consensus 239 ------------------~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 239 ------------------TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred ------------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 00112457789999999999999999999999999999863
No 253
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.8e-40 Score=297.59 Aligned_cols=248 Identities=28% Similarity=0.477 Sum_probs=194.0
Q ss_pred eeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeec
Q 017139 38 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEY 113 (376)
Q Consensus 38 ~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~ 113 (376)
....||+|+||.||+|.+..++..+|+|.+.... ....+|+.+++.++|+||+++++++ ..+..+++|+||
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~ 86 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD-----SENGFFKIFMEQ 86 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee-----ccCCEEEEEEec
Confidence 3458999999999999999999999999886543 2345789999999999999999987 444568999999
Q ss_pred ccc-hHHHHHHhhhhcCCCC--CHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 114 VPE-TMYRVLKHYSSMNQRM--PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 114 ~~g-~l~~~l~~~~~~~~~l--~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
+++ +|...+... ...+ ++..+..++.||+.||.|||+ +||+||||||+||+++..++.++|+|||.+......
T Consensus 87 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 87 VPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred CCCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 985 666666542 1234 788889999999999999999 799999999999999865678999999998765332
Q ss_pred CC-cceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 191 EA-NISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 191 ~~-~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
.. .....+++.|+|||.+.+. ..++.++|+||+|+++|+|++|..||.................
T Consensus 163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------- 228 (268)
T cd06624 163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK-------------- 228 (268)
T ss_pred CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc--------------
Confidence 22 2234578899999998543 2378899999999999999999999975433211110000000
Q ss_pred cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 269 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
....++..+++++.+++.+||+.+|++|||+.+++.||||
T Consensus 229 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 229 ------------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ------------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0111344578899999999999999999999999999997
No 254
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.1e-41 Score=303.72 Aligned_cols=259 Identities=29% Similarity=0.453 Sum_probs=199.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.++|++.+.||+|+||+||++.+..+++.||+|++.... ....+|+++++.++||||+++++++ .....+
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF-----LNENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeE-----ecCCEE
Confidence 468999999999999999999999999999999876442 2344789999999999999999998 444568
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++||||+++ +|...+.. .+.+++..++.++.|++.||.|||+..+++|+||+|+||+++. ++.++|+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~-~~~~~l~d~gl~~~ 153 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS-RGQIKLCDFGVSGE 153 (284)
T ss_pred EEEEecCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC-CCcEEEccCCcccc
Confidence 999999996 55444433 3568999999999999999999996348999999999999995 78899999999865
Q ss_pred cccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHhcCCCCHHHHh
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ----LVEIIKVLGTPTREEIR 262 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~ 262 (376)
..... .....++..|+|||.+.+. .++.++|+||+||++|+|++|..||........ ...+... +.
T Consensus 154 ~~~~~-~~~~~~~~~~~aPE~~~~~-~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--------~~ 223 (284)
T cd06620 154 LINSI-ADTFVGTSTYMSPERIQGG-KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDL--------LQ 223 (284)
T ss_pred hhhhc-cCccccCcccCCHHHHccC-CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHH--------HH
Confidence 43222 2245678999999998655 588999999999999999999999986544211 0000000 00
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
..... . .+. .....++.++.+|+.+||..||++|||++|+++||||.+-
T Consensus 224 ~~~~~-~---~~~--------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 224 QIVQE-P---PPR--------LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHhhc-c---CCC--------CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00000 0 000 0011267889999999999999999999999999999653
No 255
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.6e-41 Score=310.96 Aligned_cols=278 Identities=21% Similarity=0.318 Sum_probs=198.4
Q ss_pred eeeccC--CceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G--~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
..||.| +||+||+|++..+|+.||+|++.... ....+|+.+++.++||||+++++++ .....+++|+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-----~~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF-----TTGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE-----ecCCceEEEE
Confidence 456666 99999999999999999999986432 2345688888999999999999998 4445589999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+.+ ++.+.+.... ...+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.++++||+.+......
T Consensus 79 e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~-~~~~~~~~~~~~~~~~~~ 154 (328)
T cd08226 79 PFMAYGSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISG-DGLVSLSGLSHLYSLVRN 154 (328)
T ss_pred ecccCCCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeC-CCcEEEechHHHhhhhcc
Confidence 99995 6666665532 3458999999999999999999999 79999999999999996 778999999865433221
Q ss_pred CCc--------ceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH--
Q 017139 191 EAN--------ISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE-- 259 (376)
Q Consensus 191 ~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~-- 259 (376)
... ....++..|+|||++.+. ..++.++|+||+||++|+|++|..||.+.................+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (328)
T cd08226 155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDIT 234 (328)
T ss_pred CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcccc
Confidence 111 011235569999998653 347899999999999999999999998876655544433321110000
Q ss_pred -------HHhhcCcCCc----Ccc-----CCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 260 -------EIRCMNPNYT----DFR-----FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 260 -------~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
.+......+. +.. ........+.......++.++.+|+.+||+.||++|||++++|+||||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 235 TFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred ccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0000000000 000 000011111222233467889999999999999999999999999999876
Q ss_pred cCC
Q 017139 324 REP 326 (376)
Q Consensus 324 ~~~ 326 (376)
...
T Consensus 315 ~~~ 317 (328)
T cd08226 315 KEQ 317 (328)
T ss_pred HHh
Confidence 553
No 256
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.5e-40 Score=294.30 Aligned_cols=249 Identities=29% Similarity=0.448 Sum_probs=205.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|++.+.||.|+||.||++.+..+++.+|+|.+.... ....+|+++++.++|+||+++++++. +....|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 5899999999999999999999999999999986432 12336888999999999999999883 445689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||||+++ +|...+.........+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~-~~~~kl~d~g~~~~~ 153 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVA-NDLVKIGDLGISKVL 153 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEec-CCcEEEeeccchhhh
Confidence 99999985 7777776654445778999999999999999999999 79999999999999996 778999999999876
Q ss_pred ccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 188 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
... ......+++.|+|||.+.+. .++.++|+||+|+++|+|++|+.||...+.......+....
T Consensus 154 ~~~-~~~~~~~~~~~~~Pe~~~~~-~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------------- 217 (256)
T cd08530 154 KKN-MAKTQIGTPHYMAPEVWKGR-PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK-------------- 217 (256)
T ss_pred ccC-CcccccCCccccCHHHHCCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 544 33345678899999998664 47889999999999999999999998877654443332210
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
++ ..+..++.++++++.+||..+|++||++.++++||++
T Consensus 218 -----~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 218 -----YP---------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -----CC---------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 00 0223468899999999999999999999999999984
No 257
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.3e-40 Score=298.15 Aligned_cols=245 Identities=19% Similarity=0.215 Sum_probs=192.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEc---CCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.++|++.+.||+|+||.||+|... ..+..||+|.+.... ....+|+.+++.++||||+++++++. ..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cC
Confidence 457999999999999999999865 346689999886542 12346899999999999999999883 34
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+++||||+++ +|.+.+.. ....+++..++.++.|++.||+|||+ +|++||||||+||+++. ++.++++|||.
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~-~~~~~l~dfg~ 153 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRK---HEGQLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNS-DLVCKISGFRR 153 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcC-CCcEEECCCcc
Confidence 458999999996 45444443 23568999999999999999999999 79999999999999996 78899999998
Q ss_pred ccccccCCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 184 AKVLVKGEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 184 ~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
+.......... ...++..|+|||.+.+. .++.++|+||+||++|++++ |..||.+.+..+.+..+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~----- 227 (266)
T cd05064 154 LQEDKSEAIYTTMSGKSPVLWAAPEAIQYH-HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL----- 227 (266)
T ss_pred cccccccchhcccCCCCceeecCHHHHhhC-CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-----
Confidence 76543222111 22335689999998664 48999999999999999775 99999887766655544321100
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+..++..+.+++.+||+.+|++||+++++++
T Consensus 228 -----------------------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 228 -----------------------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -----------------------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 023457889999999999999999999999864
No 258
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.8e-40 Score=299.05 Aligned_cols=253 Identities=29% Similarity=0.460 Sum_probs=202.9
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
+|...+.||.|++|.||++.+..+++.+++|++.... ....+|+.+++.++||||+++++++. .....+++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 4666789999999999999999999999999875332 22346889999999999999999884 34458899
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
+||+.| +|.+.+.. ..+++..+..++.|++.||+|||+ +|++||||+|+||+++. ++.++|+|||.+.....
T Consensus 95 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~-~~~~~l~d~g~~~~~~~ 167 (285)
T cd06648 95 MEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTS-DGRVKLSDFGFCAQVSK 167 (285)
T ss_pred EeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcC-CCcEEEcccccchhhcc
Confidence 999985 66555543 468999999999999999999999 79999999999999996 78899999998765433
Q ss_pred CCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 190 GEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 190 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
... .....+++.|+|||.+.+.. ++.++|+||+||++|+|++|..||...+.......+... ..+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~----------- 234 (285)
T cd06648 168 EVPRRKSLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPK----------- 234 (285)
T ss_pred CCcccccccCCccccCHHHhcCCC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCC-----------
Confidence 221 22346788999999986644 889999999999999999999999877665555443321 0000
Q ss_pred cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 269 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
......++..+.+++.+||+.||++|||+.++++||||++...+
T Consensus 235 --------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 235 --------------LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred --------------CcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence 00112368899999999999999999999999999999886653
No 259
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.4e-40 Score=295.86 Aligned_cols=250 Identities=31% Similarity=0.535 Sum_probs=198.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||+|+||.||+|.+..+++.|++|.+..... ....|+++++.++|+||+++++.+ .+...++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 59999999999999999999999999999999865433 234689999999999999999987 4445689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|+||+++ +|.+.+.. +..+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.+||+|||++...
T Consensus 76 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~-~~~~kl~d~g~~~~~ 149 (264)
T cd06626 76 IFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDH-NGVIKLGDFGCAVKL 149 (264)
T ss_pred EEEecCCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECC-CCCEEEccccccccc
Confidence 99999985 55555543 3558899999999999999999999 79999999999999996 788999999998776
Q ss_pred ccCCCcc-----eeeccccccChhhhhCCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 188 VKGEANI-----SYICSRYYRAPELIFGAT--EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 188 ~~~~~~~-----~~~~t~~y~aPE~~~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
....... ...++..|+|||.+.+.. .++.++|+||||+++|++++|..||...+........... +...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~--- 225 (264)
T cd06626 150 KNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP--- 225 (264)
T ss_pred CCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCC---
Confidence 4332211 245688999999986532 2788999999999999999999999765432222211111 1000
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
.+| ....+++.+.++|.+||+.||++|||+.+++.|||+
T Consensus 226 -----------~~~----------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 226 -----------PIP----------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred -----------CCC----------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 011 012358899999999999999999999999999996
No 260
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.9e-40 Score=296.71 Aligned_cols=249 Identities=28% Similarity=0.489 Sum_probs=200.1
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.+|.+.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD---PEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc---CCC
Confidence 46999999999999999999999999999999874321 123468999999999999999998743 233
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+++++||+++ +|.+.+.. ...+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~-~~~~~l~dfg~ 152 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDS-AGNVKLGDFGA 152 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcC-CCCEEECcccc
Confidence 457899999985 56555543 3558899999999999999999999 79999999999999996 77899999999
Q ss_pred ccccccC----CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 184 AKVLVKG----EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 184 ~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
++..... .......++..|+|||.+.+. .++.++|+|||||++|+|++|..||..........++.. .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~-- 226 (264)
T cd06653 153 SKRIQTICMSGTGIKSVTGTPYWMSPEVISGE-GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPT-- 226 (264)
T ss_pred ccccccccccCccccccCCcccccCHhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCC--
Confidence 8765321 111234578899999998764 478999999999999999999999987665554443321 111
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
...++..+++++.++|.+||. +|.+||++.+++.|||.
T Consensus 227 ----------------------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 227 ----------------------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ----------------------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 112445688999999999999 57999999999999984
No 261
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.2e-40 Score=300.12 Aligned_cols=248 Identities=27% Similarity=0.409 Sum_probs=200.7
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
-|.+.+.||.|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++||||+++++++ .++..+|+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE-----EeCCeEEE
Confidence 4788999999999999999999999999999875432 2344688999999999999999988 44556899
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
||||+++ +|...+. ...+++..+..++.|++.++.+||+ +|++|+||+|+||+++. ++.++|+|||++....
T Consensus 80 v~e~~~~~~l~~~i~-----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~-~~~~~l~dfg~~~~~~ 152 (277)
T cd06641 80 IMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSE-HGEVKLADFGVAGQLT 152 (277)
T ss_pred EEEeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECC-CCCEEEeecccceecc
Confidence 9999996 5554443 2468999999999999999999999 79999999999999996 7889999999987654
Q ss_pred cCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.... .....++..|+|||.+.+. ..+.++|+||+||++|+|++|..||...........+... ..
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~------------ 218 (277)
T cd06641 153 DTQIKRNTFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-NP------------ 218 (277)
T ss_pred cchhhhccccCCccccChhhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-CC------------
Confidence 3221 2234578889999998654 4788999999999999999999999876554433332110 00
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
..+...++.++.+++.+||..||++||++.++++||||.+.
T Consensus 219 ---------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 219 ---------------PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred ---------------CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 01223568899999999999999999999999999999863
No 262
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=9.4e-41 Score=300.99 Aligned_cols=246 Identities=33% Similarity=0.597 Sum_probs=203.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCC-CCCeeecceeeeecCCCCce
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~ 105 (376)
++|.+.+.||+|+||.||+|.+..+++.+|+|++.... ....+|.++++.+. ||||+++++++ .+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 46999999999999999999999999999999886521 23346888999998 99999999988 4555
Q ss_pred eEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+++|||++. ++|.+.+.. ...+++..++.++.|++.||.+||+ .|++|+||+|+||+++. ++.++|+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~-~~~~~l~df~~~ 149 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDK-DMHIKITDFGTA 149 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECC-CCCEEecCCccc
Confidence 6899999995 577766654 3479999999999999999999999 79999999999999986 778999999998
Q ss_pred cccccCCC---------------------cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 017139 185 KVLVKGEA---------------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 243 (376)
Q Consensus 185 ~~~~~~~~---------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~ 243 (376)
........ .....++..|+|||.+... .++.++|+||||++++++++|..||...+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK-PAGKSSDLWALGCIIYQMLTGKPPFRGSNEY 228 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC-CCChhhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 76543221 1234567889999998654 4889999999999999999999999887755
Q ss_pred HHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH----HHHhCCCc
Q 017139 244 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPF 319 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~ 319 (376)
..+..+... ...++..+++.+.++|.+||+.||++||++ +++++|||
T Consensus 229 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 229 LTFQKILKL-----------------------------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred HHHHHHHhc-----------------------------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 554444321 011334568899999999999999999999 99999999
Q ss_pred c
Q 017139 320 F 320 (376)
Q Consensus 320 ~ 320 (376)
|
T Consensus 280 ~ 280 (280)
T cd05581 280 F 280 (280)
T ss_pred C
Confidence 8
No 263
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.8e-40 Score=297.28 Aligned_cols=249 Identities=28% Similarity=0.436 Sum_probs=197.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||+|++..+++.||+|.+.... ....+|+.+++.++||||+++++++.. ...
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-----DNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-----CCe
Confidence 57999999999999999999999999999999875321 123468999999999999999998843 345
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+++++||+++ +|...+.........+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~-~~~~~l~d~g~~~ 154 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcC-CCCEEECccccce
Confidence 8899999995 6766666544445668999999999999999999999 79999999999999986 7789999999987
Q ss_pred ccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHHHhh
Q 017139 186 VLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA-VDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 186 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~ 263 (376)
....... .....+++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||..... .......+...+.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------ 227 (267)
T cd08228 155 FFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP------ 227 (267)
T ss_pred eccchhHHHhcCCCCccccChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC------
Confidence 6543322 12345788899999987654 78999999999999999999999965432 122222222111111
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
......+..+.+++.+||+.||++||++.++++
T Consensus 228 --------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 228 --------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred --------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 012246788999999999999999999999985
No 264
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.1e-40 Score=297.88 Aligned_cols=245 Identities=33% Similarity=0.555 Sum_probs=198.9
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
||.|+||.||+|++..+|+.+++|.+..... ...+|+++++.++||||+++++.+ .....+|++|||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999999999999999865432 344688999999999999999887 4556689999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCC--
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-- 191 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~-- 191 (376)
.+ +|.+.+.. ...+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++.......
T Consensus 76 ~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~ 149 (265)
T cd05579 76 PGGDLASLLEN----VGSLDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDS-NGHLKLTDFGLSKVGLVRRQI 149 (265)
T ss_pred CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcC-CCCEEEEecccchhcccCccc
Confidence 85 66666654 2468999999999999999999999 79999999999999996 7889999999987654332
Q ss_pred -------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 192 -------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 192 -------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
......++..|+|||...... .+.++|+||||+++|++++|..||...+..+....+... ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~-------- 218 (265)
T cd05579 150 NLNDDEKEDKRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG--KI-------- 218 (265)
T ss_pred ccccccccccCcccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--Cc--------
Confidence 122345678899999986654 789999999999999999999999887766555444321 00
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH---HHHhCCCccccccC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA---LEACAHPFFDELRE 325 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~---~ell~hp~~~~~~~ 325 (376)
..+. ...++..+.+++.+||+.+|++|||+ .++|+||||++++|
T Consensus 219 -------~~~~----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 219 -------EWPE----------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred -------CCCc----------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 0000 01248899999999999999999999 99999999998764
No 265
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.7e-40 Score=295.63 Aligned_cols=245 Identities=22% Similarity=0.344 Sum_probs=197.0
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.+|.+.+.||+|+||.||+|.+..+++.+|+|.+..+.. ...+|+++++.++||||+++++++ ..+..++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEE-----cCCCCcEEE
Confidence 469999999999999999999999999999999875532 244699999999999999999987 344458899
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+++ +|.+.+... ....+++..++.++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~-~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 81 TEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGE-NHLVKVADFGLSRLMTG 156 (263)
T ss_pred EEeCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcC-CCcEEeCCCcccccccc
Confidence 999985 666666432 23568999999999999999999999 79999999999999986 78899999999876543
Q ss_pred CCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 190 GEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 190 ~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... ...++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+..+....+....
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~------------- 222 (263)
T cd05052 157 DTYTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY------------- 222 (263)
T ss_pred ceeeccCCCCCccccCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-------------
Confidence 32211 12235679999998654 48999999999999999998 999998876655444332210
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
....+..++.++.++|.+||+.||++|||+.++++
T Consensus 223 ---------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 223 ---------------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ---------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 00123457899999999999999999999999864
No 266
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1e-40 Score=297.72 Aligned_cols=249 Identities=24% Similarity=0.448 Sum_probs=199.2
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---------cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|.+.+.||+|+||.||++.+..++..+++|.+.... .....|+.+++.++||||+++++++ .+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 5999999999999999999998887777777654311 1233588899999999999999988 3344
Q ss_pred eEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..++||||+++ +|...+.........+++..++.++.|++.||.|||+ .|++|+||+|+||+++ ++.++|+|||++
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~--~~~~~l~d~g~~ 152 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLK--NNLLKIGDFGVS 152 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEee--cCCEeecccCce
Confidence 58899999985 7766666555556789999999999999999999999 7999999999999997 356999999998
Q ss_pred cccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 185 KVLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 185 ~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
........ .....+++.|+|||.+.+. .++.++|+||+|+++|+|++|..||.+.........+... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~------- 222 (260)
T cd08222 153 RLLMGSCDLATTFTGTPYYMSPEALKHQ-GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PT------- 222 (260)
T ss_pred eecCCCcccccCCCCCcCccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CC-------
Confidence 76543322 2244578889999988654 4788999999999999999999999776654444333221 00
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..++..++.++.++|.+||..||++||++.++++||||
T Consensus 223 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 223 -------------------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -------------------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 01234568899999999999999999999999999997
No 267
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.8e-40 Score=300.72 Aligned_cols=260 Identities=26% Similarity=0.398 Sum_probs=201.2
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhC-CCCCeeecceeeeecCCCCc
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLM-DHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~ 104 (376)
...++|.+.+.||+|+||.||+|.+..+++.||+|.+..... ...+|..++... .||||+++++++ .+.
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~ 86 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF-----ITD 86 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee-----ecC
Confidence 455789999999999999999999998899999999865321 122355545444 599999999998 444
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+|++|||+++.+..++... ...+++..+..++.|++.||.|||+..||+||||+|+||+++. ++.+||+|||++
T Consensus 87 ~~~~~v~e~~~~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~-~~~~kL~dfg~~ 162 (296)
T cd06618 87 SDVFICMELMSTCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA-SGNVKLCDFGIS 162 (296)
T ss_pred CeEEEEeeccCcCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC-CCCEEECccccc
Confidence 558999999988766665442 3478999999999999999999996249999999999999995 788999999998
Q ss_pred cccccCCCcceeeccccccChhhhhCC---CCCCccchhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHH
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFGA---TEYTTSIDIWSAGCVLAELLLGQPLFPGENA-VDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~ 260 (376)
.............++..|+|||.+.+. ..++.++|+||||+++|+|++|..||..... .+.+..+..... +
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~---- 237 (296)
T cd06618 163 GRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP-P---- 237 (296)
T ss_pred hhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC-C----
Confidence 765444333344567889999998643 2368899999999999999999999976432 223332222100 0
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
..+ ....++.++.+|+.+||..||++||+++++++||||.....
T Consensus 238 -----------~~~----------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 238 -----------SLP----------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred -----------CCC----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 000 01136789999999999999999999999999999986533
No 268
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-40 Score=300.99 Aligned_cols=248 Identities=23% Similarity=0.313 Sum_probs=197.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCC-----cEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETG-----ETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
.+|++.+.||+|+||.||+|.+...+ ..+|+|.+..... ...+|+.+++.++||||+++++++ .+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC-----TK 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE-----cC
Confidence 47999999999999999999986655 6799998864432 235689999999999999999988 34
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 170 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~ 170 (376)
....|++|||+++ +|.+.+..... ....+++..+..++.|++.||.|||+ +|++|+||||+||+++
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAARNCLVG 158 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccccceEEEc
Confidence 4458899999984 77777654321 11568889999999999999999999 7999999999999999
Q ss_pred CCCCcEEEEecCCccccccCC---CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 017139 171 PLTHQVKLCDFGSAKVLVKGE---ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQL 246 (376)
Q Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~ 246 (376)
. ++.++|+|||++....... ......+++.|+|||.+.+. .++.++|+|||||++|+|++ |..||.+....+..
T Consensus 159 ~-~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 159 E-GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG-KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI 236 (283)
T ss_pred C-CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccC-cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 6 7789999999987543322 12234457889999998654 48999999999999999998 99999887766555
Q ss_pred HHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 247 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..+...... ..+..++.++.+|+.+||+.||.+||++.+++++
T Consensus 237 ~~i~~~~~~----------------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 237 EMIRSRQLL----------------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHcCCcC----------------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 444331100 0234578999999999999999999999999764
No 269
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.1e-40 Score=304.21 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=194.1
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcE--EEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecCCCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~--~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~ 103 (376)
..++|++.+.||+|+||.||+|.+..++.. +++|.+.... ....+|++++.++ +||||+++++++ ..
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~ 79 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EH 79 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CC
Confidence 456899999999999999999998877764 5777665322 1234688999999 899999999988 45
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 170 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~ 170 (376)
+..+|+||||+++ +|.+.+..... ....+++..++.++.|++.||+|||+ +|++||||||+|||++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~Nili~ 158 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVG 158 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEec
Confidence 5568999999984 77777654321 12468899999999999999999999 7999999999999999
Q ss_pred CCCCcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 017139 171 PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 249 (376)
Q Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~ 249 (376)
. ++.+||+|||++.............++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+..+....+
T Consensus 159 ~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 236 (303)
T cd05088 159 E-NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236 (303)
T ss_pred C-CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhcc-CCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 6 778999999998643221111222335679999998654 48999999999999999998 99999877655444332
Q ss_pred HHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 250 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.... ....+...++++.+++.+||+.||++||++++++++
T Consensus 237 ~~~~----------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 237 PQGY----------------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred hcCC----------------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1100 000123468899999999999999999999999876
No 270
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.5e-40 Score=290.92 Aligned_cols=248 Identities=30% Similarity=0.499 Sum_probs=202.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
+|++.+.||+|++|.||++.+..+++.+++|++.... ....+|+.+++.++|+|++++++++ ..+...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY-----LKKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeEEEE
Confidence 4889999999999999999999899999999986654 3455799999999999999999988 334558899
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
+||+++ +|.+.+... ...+++..++.++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 76 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~ 150 (253)
T cd05122 76 MEFCSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTS-DGEVKLIDFGLSAQLSD 150 (253)
T ss_pred EecCCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEcc-CCeEEEeeccccccccc
Confidence 999995 665555442 2578999999999999999999999 79999999999999996 78899999999877655
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
........++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+........... ..+.
T Consensus 151 ~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~------------ 216 (253)
T cd05122 151 TKARNTMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN-GPPG------------ 216 (253)
T ss_pred cccccceecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc-CCCC------------
Confidence 43334566788999999987654 789999999999999999999999877554444332221 0000
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCc
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 319 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~ 319 (376)
. .....++..+.++|.+||+.||++|||+.+++.|||
T Consensus 217 ---~----------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 ---L----------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ---c----------CcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0 001124789999999999999999999999999998
No 271
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.1e-42 Score=315.84 Aligned_cols=254 Identities=28% Similarity=0.425 Sum_probs=205.1
Q ss_pred cccce-EeeeeeccCCceEEEEEEEcCCCcEEEEEEecc-----c---ccchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 32 QTISY-MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----D---RRYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 32 ~~~~y-~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~-----~---~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
..++| +...+||+|+|-+||+|.|..+|-.||--.+.. . ...+..|+.+|+.|+||||+++++++.+.
T Consensus 37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~--- 113 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT--- 113 (632)
T ss_pred CCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC---
Confidence 34556 456799999999999999999999888654421 1 24456799999999999999999998663
Q ss_pred CceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-CCceeccCCCCCeeecCCCCcEEEEe
Q 017139 103 DELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV-PGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 103 ~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
.+..+.+|+|.+. |+|..+++. .+......++.|+.||+.||.|||++ ..|+|||||-+||||+...|.|||+|
T Consensus 114 ~n~~in~iTEL~TSGtLr~Y~kk----~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGD 189 (632)
T KOG0584|consen 114 DNKTINFITELFTSGTLREYRKK----HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGD 189 (632)
T ss_pred CCceeeeeeecccCCcHHHHHHH----hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecc
Confidence 3466889999998 555555544 57788899999999999999999984 35999999999999999889999999
Q ss_pred cCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHH
Q 017139 181 FGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD-QLVEIIKVLGTPTRE 259 (376)
Q Consensus 181 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~~~~~~~~~~~ 259 (376)
+|+|........ ...+|||.|||||.+. ..|+..+||||||+.++||+|+..||..-.+.. .+.++.. |..+..
T Consensus 190 LGLAtl~r~s~a-ksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~s 264 (632)
T KOG0584|consen 190 LGLATLLRKSHA-KSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIKPAA 264 (632)
T ss_pred hhHHHHhhcccc-ceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCCHHH
Confidence 999987654433 3489999999999996 359999999999999999999999998755444 4444433 222111
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
+.+--.+++++||.+||.. .+.|+|+.|||.||||+.-
T Consensus 265 -------------------------l~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 265 -------------------------LSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -------------------------hhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 2223478999999999999 9999999999999999863
No 272
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.2e-40 Score=308.31 Aligned_cols=251 Identities=25% Similarity=0.366 Sum_probs=193.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTTS 101 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~ 101 (376)
.++|++++.||.|+||.||+|.+.. +++.||+|++.... ....+|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~--- 82 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK--- 82 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec---
Confidence 4589999999999999999997543 45789999886432 1233688999999 89999999997743
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhhh-----------------------------------------------------
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYSS----------------------------------------------------- 127 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~~----------------------------------------------------- 127 (376)
.+..++++|||+++ +|.+.+.....
T Consensus 83 -~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 83 -PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred -CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 33457899999995 66666643211
Q ss_pred ----cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC---cceeeccc
Q 017139 128 ----MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSR 200 (376)
Q Consensus 128 ----~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~ 200 (376)
....+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.++|+|||++........ .....++.
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~-~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~ 239 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRKGDARLPL 239 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeC-CCcEEEeccccchhcccCcchhhccCCCCCc
Confidence 02368899999999999999999999 79999999999999996 77899999999986533221 12234467
Q ss_pred cccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCC
Q 017139 201 YYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAH 279 (376)
Q Consensus 201 ~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (376)
.|+|||++.+. .++.++|||||||++|+|++ |..||.+....+.+...+.....
T Consensus 240 ~y~aPE~~~~~-~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------------------ 294 (337)
T cd05054 240 KWMAPESIFDK-VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR------------------------ 294 (337)
T ss_pred cccCcHHhcCC-CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC------------------------
Confidence 89999998765 48999999999999999998 99999875544433333221000
Q ss_pred CcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 280 PWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 280 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...+...++++.+++.+||+.+|++||+++++++|
T Consensus 295 ---~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 295 ---MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred ---CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00123467899999999999999999999999865
No 273
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.4e-40 Score=301.72 Aligned_cols=248 Identities=31% Similarity=0.456 Sum_probs=202.6
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.|...+.||+|+||.||+|++..++..+|+|.+.... ....+|+++++.++|||++++++++. ++...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-----REHTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----eCCeE
Confidence 4888999999999999999999999999999986432 12346889999999999999999884 34458
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++||||+.|++.+.+.. ....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++...
T Consensus 101 ~lv~e~~~g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~-~~~~kl~dfg~~~~~ 175 (317)
T cd06635 101 WLVMEYCLGSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTE-PGQVKLADFGSASIA 175 (317)
T ss_pred EEEEeCCCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECC-CCCEEEecCCCcccc
Confidence 89999999987776653 24568999999999999999999999 79999999999999986 788999999988654
Q ss_pred ccCCCcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 188 VKGEANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 188 ~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.. .....+++.|+|||.+.. ...++.++|+|||||++|+|++|..||...+.......+......+
T Consensus 176 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 243 (317)
T cd06635 176 SP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--------- 243 (317)
T ss_pred CC---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC---------
Confidence 32 234567889999999742 2347889999999999999999999998776655555444321100
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
.....+++.+.+++.+||+.+|.+||++.++++|||+..
T Consensus 244 ------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 244 ------------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ------------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 011246788999999999999999999999999999965
No 274
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.6e-40 Score=300.16 Aligned_cols=252 Identities=29% Similarity=0.431 Sum_probs=200.2
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
|....+||+|+||.||++....+++.+|+|++.... ....+|+.+++.++|+||+++++++ ......++||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEE-----EeCCEEEEEE
Confidence 444578999999999999999999999999875322 2234688999999999999999988 3445689999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+++ +|.+.+. ...+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~-~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 97 EFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred ecCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECC-CCCEEEcccccceecccc
Confidence 99997 4444332 2468999999999999999999999 79999999999999996 778999999988655432
Q ss_pred C-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 191 E-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 191 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
. ......+++.|+|||.+.+. .++.++|+||+|+++|+|++|..||.+.........+......
T Consensus 170 ~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-------------- 234 (292)
T cd06657 170 VPRRKSLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-------------- 234 (292)
T ss_pred cccccccccCccccCHHHhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc--------------
Confidence 2 22345678899999988654 4789999999999999999999999877665544433221100
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
.......+++++.+++.+||+.||.+||++.+++.||||.....+
T Consensus 235 ------------~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 235 ------------KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred ------------ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 000112468899999999999999999999999999999886543
No 275
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.9e-40 Score=302.28 Aligned_cols=250 Identities=29% Similarity=0.441 Sum_probs=202.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
..|...+.||.|+||.||+|++..+++.+|+|.+.... ....+|+++++.++|+|++++.+++.. ...
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCe
Confidence 45888999999999999999999999999999885321 123368899999999999999998843 445
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.++||||+.|++...+.. ....+++..+..++.|++.||.|||+ +|++||||+|+||+++. ++.++|+|||++..
T Consensus 90 ~~lv~e~~~~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 164 (308)
T cd06634 90 AWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSE-PGLVKLGDFGSASI 164 (308)
T ss_pred eEEEEEccCCCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECC-CCcEEECCccccee
Confidence 889999999887766643 23568999999999999999999999 79999999999999986 78899999999876
Q ss_pred cccCCCcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 187 LVKGEANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
... .....+++.|+|||.+.+ ...++.++|+|||||++|+|++|..||...+..+....+..... +
T Consensus 165 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~-------- 232 (308)
T cd06634 165 MAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-P-------- 232 (308)
T ss_pred ecC---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-C--------
Confidence 432 224467889999999752 23478899999999999999999999987665544443332100 0
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
.......+..+.++|.+||..+|++||++++++.|||+...
T Consensus 233 ------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 233 ------------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred ------------------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 00122468889999999999999999999999999999874
No 276
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-40 Score=300.71 Aligned_cols=256 Identities=27% Similarity=0.473 Sum_probs=201.1
Q ss_pred ceEeeeeeccCCceEEEEEEEc---CCCcEEEEEEecccc--------cchHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 35 SYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~--------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
+|++.+.||.|+||.||+|++. .+|+.||+|++.... ....+|+.+++.+ +|+||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4899999999999999999975 478999999986421 2234688999999 589999999888 5
Q ss_pred CceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
.+..+|+||||+++ +|.+.+.. ...+++..+..++.|++.||.|||+ .|++||||+|+||+++. ++.+||+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~df 149 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDS-NGHVVLTDF 149 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECC-CCCEEEeeC
Confidence 55668999999995 66555543 4568899999999999999999999 79999999999999996 788999999
Q ss_pred CCccccccCC--CcceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 182 GSAKVLVKGE--ANISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 182 g~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
|++....... ......++..|+|||.+.+. ..++.++|+||||+++|+|++|..||...........+.+.....
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~-- 227 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS-- 227 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--
Confidence 9987654322 12245578899999998643 236789999999999999999999997543322222222211000
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC-----CHHHHhCCCccccccCC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFDELREP 326 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~~~~~~~~ 326 (376)
...++..+++.+.+++.+||..||++|+ ++++++.||||+..++.
T Consensus 228 -----------------------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 277 (290)
T cd05613 228 -----------------------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWD 277 (290)
T ss_pred -----------------------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHH
Confidence 0012345788999999999999999997 88999999999988764
No 277
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.6e-40 Score=328.29 Aligned_cols=250 Identities=24% Similarity=0.335 Sum_probs=193.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|++.+.||+|+||.||+|.+..+|+.||+|++..+. ....+|+.+++.++||||+++++++ .++..
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~-----~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC-----SDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE-----eeCCE
Confidence 57999999999999999999999999999999986532 1234689999999999999999988 44456
Q ss_pred EEEEeecccc-hHHHHHHhhhh-------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEE
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSS-------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL 178 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl 178 (376)
.|++|||++| +|.+.+..... ....++...+..++.||+.||+|||+ +||+||||||+||+++. ++.++|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~-dg~vKL 154 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGL-FGEVVI 154 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcC-CCCEEE
Confidence 8999999986 67666654211 12345667788999999999999999 79999999999999996 778999
Q ss_pred EecCCccccccCC-------------------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 017139 179 CDFGSAKVLVKGE-------------------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG 239 (376)
Q Consensus 179 ~Dfg~~~~~~~~~-------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~ 239 (376)
+|||++....... ......||+.|+|||.+.+.. ++.++|+||+||++|+|++|..||..
T Consensus 155 iDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 155 LDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999997652110 011246899999999987654 89999999999999999999999977
Q ss_pred CChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 240 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.+....... .....+. . ......+++.+.+++.+||+.||++|++..+.+.+
T Consensus 234 ~~~~ki~~~--~~i~~P~--~----------------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 234 KKGRKISYR--DVILSPI--E----------------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred cchhhhhhh--hhccChh--h----------------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 543322211 1000000 0 00113578899999999999999999987665543
No 278
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.2e-40 Score=300.50 Aligned_cols=248 Identities=22% Similarity=0.295 Sum_probs=193.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCc--EEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecCCCCce
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGE--TVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
++|++.+.||+|+||.||+|....++. .+++|.+.... ....+|+.++.++ +||||+++++++ .+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC-----ENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE-----ccCC
Confidence 579999999999999999999877765 46888775321 2344688999888 799999999987 4445
Q ss_pred eEEEEeeccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCC
Q 017139 106 FLNLVMEYVP-ETMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL 172 (376)
Q Consensus 106 ~~~lv~e~~~-g~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~ 172 (376)
.+|++|||++ ++|.+.+..... ....+++..++.++.|++.||+|||+ +|++||||||+||+++.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Nill~~- 154 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNVLVGE- 154 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceEEECC-
Confidence 6899999998 477777754221 12358899999999999999999999 79999999999999986
Q ss_pred CCcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 017139 173 THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 251 (376)
Q Consensus 173 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~ 251 (376)
++.+||+|||++..............+..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+....+....+..
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~ 233 (297)
T cd05089 155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYS-VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 233 (297)
T ss_pred CCeEEECCcCCCccccceeccCCCCcCccccCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc
Confidence 778999999998643222111122234569999998654 48999999999999999997 9999988776655544332
Q ss_pred hcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 252 VLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
... ...+..++.++.+|+.+||..||.+|||++++++.
T Consensus 234 ~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 234 GYR----------------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCC----------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 100 01223578899999999999999999999999765
No 279
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=8.1e-40 Score=291.05 Aligned_cols=250 Identities=34% Similarity=0.526 Sum_probs=202.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||+|++|.||+|.+..+++.+++|++.... ....+|+.++++++||||+++++.+... ....++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence 4889999999999999999999999999999986543 2345789999999999999999888432 125688
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+++||+++ +|.+.+.. ...+++..++.++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 78 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 151 (260)
T cd06606 78 IFLEYVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDS-DGVVKLADFGCAKRL 151 (260)
T ss_pred EEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcC-CCCEEEcccccEEec
Confidence 99999964 66655554 2379999999999999999999999 79999999999999996 788999999998876
Q ss_pred ccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 188 VKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 188 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
..... .....++..|+|||.+.+.. .+.++|+||||+++|+|++|..||...+.... .......
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~---------- 218 (260)
T cd06606 152 GDIETGEGTGSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPMA--ALYKIGS---------- 218 (260)
T ss_pred ccccccccccCCCCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--HHHhccc----------
Confidence 55543 34456788999999986554 89999999999999999999999987662211 1111100
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
......++..++.++.++|.+||+.||++||++.++++||||
T Consensus 219 --------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 --------------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred --------------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 000111344568999999999999999999999999999997
No 280
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3e-40 Score=297.89 Aligned_cols=248 Identities=23% Similarity=0.338 Sum_probs=196.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
.++|.+.+.||+|+||.||+|.+.. +++.||+|.+.... ....+|+++++.++|+||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 78 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT----- 78 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-----
Confidence 4579999999999999999998753 36789999986543 23457999999999999999999884
Q ss_pred CceeEEEEeecccc-hHHHHHHhhh----------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYS----------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 171 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~----------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~ 171 (376)
.....++||||+++ +|.+.+.... .....+++..+..++.|++.||.+||+ +|++||||||+||+++.
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~nili~~ 157 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATRNCLVGY 157 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccceEEEcC
Confidence 33558999999985 6766665431 123458899999999999999999999 79999999999999996
Q ss_pred CCCcEEEEecCCccccccCC---CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 017139 172 LTHQVKLCDFGSAKVLVKGE---ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLV 247 (376)
Q Consensus 172 ~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~ 247 (376)
++.+||+|||++....... ......+++.|+|||++.+.. ++.++|+|||||++|+|++ |..||...+..+...
T Consensus 158 -~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05049 158 -DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIE 235 (280)
T ss_pred -CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 7889999999987543222 122334567899999997654 8999999999999999998 999998777665544
Q ss_pred HHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 248 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+... .. ...+..++..+.+++.+||+.||++||++.|+++
T Consensus 236 ~~~~~--~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 236 CITQG--RL--------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHcC--Cc--------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 43321 00 0122357889999999999999999999999874
No 281
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=341.55 Aligned_cols=256 Identities=28% Similarity=0.473 Sum_probs=207.4
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
+..-+|.....+|.|.||.||-|.+..+|+..|+|.+.-. .....+|..++..++|||+|+++++-.. .
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-----R 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-----R 1306 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-----H
Confidence 3445788899999999999999999999999999977432 2344579999999999999999988643 3
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..++|.||||.| +|.+++.+ +...++...+.+..|++.|+.|||+ +|||||||||.||+++. ++.+|++|||.
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~-~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDF-NGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeec-CCcEEeecccc
Confidence 337899999995 56555554 4557788888999999999999999 79999999999999996 77999999999
Q ss_pred ccccccCC-----CcceeeccccccChhhhhCCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 017139 184 AKVLVKGE-----ANISYICSRYYRAPELIFGAT--EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 256 (376)
Q Consensus 184 ~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~--~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~ 256 (376)
|....+.. ......||+.|||||++.+.. ....+.|||||||++.||+||+.||...+..=++.-.+.....|
T Consensus 1381 a~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~P 1460 (1509)
T KOG4645|consen 1381 AVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKP 1460 (1509)
T ss_pred eeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCC
Confidence 98775542 234678999999999996643 35678999999999999999999998765432222222211111
Q ss_pred CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccccc
Q 017139 257 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR 324 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~ 324 (376)
.+|.++|.+.+|||.+||..||.+|+++.|+|.|-|-+...
T Consensus 1461 ---------------------------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1461 ---------------------------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred ---------------------------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccc
Confidence 25667999999999999999999999999999998876543
No 282
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.6e-40 Score=295.39 Aligned_cols=250 Identities=22% Similarity=0.300 Sum_probs=194.2
Q ss_pred cccceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
..++|++.+.||+|+||.||+|.+.. ++..+|+|++..... ...+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~----- 78 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV----- 78 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 45689999999999999999998642 356799998854321 234688999999999999999987
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhhhc------CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYSSM------NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH 174 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~~~------~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~ 174 (376)
......++||||+++ +|.+.+...... ...++...+..++.|++.||.|||+ .|++|+||||+||+++. ++
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~~~-~~ 156 (277)
T cd05062 79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAE-DF 156 (277)
T ss_pred cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEEcC-CC
Confidence 445568899999985 677666542211 2346778889999999999999999 79999999999999996 78
Q ss_pred cEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 017139 175 QVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 250 (376)
Q Consensus 175 ~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~ 250 (376)
.++|+|||++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+.......+.
T Consensus 157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (277)
T cd05062 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM 235 (277)
T ss_pred CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcC-CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 899999999875433221 1122346789999998764 48999999999999999999 789998876655444333
Q ss_pred HhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 251 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.. +.+ ..+...+..+.+++.+||+.||++|||+.+++++
T Consensus 236 ~~-~~~---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 236 EG-GLL---------------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred cC-CcC---------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 21 000 0223467899999999999999999999999854
No 283
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-41 Score=311.67 Aligned_cols=265 Identities=28% Similarity=0.450 Sum_probs=210.9
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
|..++.||-|+||.|.++...++...||+|.+.+... ..+.|.+||..-+.+-||+++..| ++...+|
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF-----QDkdnLY 705 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNLY 705 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe-----ccCCceE
Confidence 7888999999999999999999999999998865432 234689999999999999999888 6677799
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||+|++| ++-.+|.. -+-|.|..++.++.++..|+++.|.+ |+|||||||+|||||. +|.|||+|||+|.-+
T Consensus 706 FVMdYIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDr-dGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDR-DGHIKLTDFGLCTGF 779 (1034)
T ss_pred EEEeccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEcc-CCceeeeeccccccc
Confidence 99999996 55555544 46799999999999999999999995 9999999999999997 888999999998533
Q ss_pred c---------cC-----------------CC-----------------cceeeccccccChhhhhCCCCCCccchhHHHH
Q 017139 188 V---------KG-----------------EA-----------------NISYICSRYYRAPELIFGATEYTTSIDIWSAG 224 (376)
Q Consensus 188 ~---------~~-----------------~~-----------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 224 (376)
. ++ .. ..+.+||+.|+|||++.... |+..+|+||.|
T Consensus 780 RWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g-~~q~cdwws~g 858 (1034)
T KOG0608|consen 780 RWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG-YTQLCDWWSVG 858 (1034)
T ss_pred eeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC-ccccchhhHhh
Confidence 1 00 00 01457899999999997654 89999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCC
Q 017139 225 CVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYS 304 (376)
Q Consensus 225 ~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 304 (376)
||||+|+.|++||...+..+.-.+++.. .. .++..+-.++|+++.++|.++.+ +
T Consensus 859 vil~em~~g~~pf~~~tp~~tq~kv~nw----------------~~---------~l~~~~~~~ls~e~~~li~kLc~-s 912 (1034)
T KOG0608|consen 859 VILYEMLVGQPPFLADTPGETQYKVINW----------------RN---------FLHIPYQGNLSKEALDLIQKLCC-S 912 (1034)
T ss_pred HHHHHHhhCCCCccCCCCCcceeeeeeh----------------hh---------ccccccccccCHHHHHHHHHHhc-C
Confidence 9999999999999877655443333221 00 01112335789999999988765 7
Q ss_pred CCCCCC---HHHHhCCCccccccCCCCCCCCCCCCCC
Q 017139 305 PSLRCT---ALEACAHPFFDELREPNARLPNGRPFPP 338 (376)
Q Consensus 305 P~~R~t---~~ell~hp~~~~~~~~~~~~~~~~~~~~ 338 (376)
++.|.. ++++..||||+.+++...+.....++|.
T Consensus 913 ad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ 949 (1034)
T KOG0608|consen 913 ADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPR 949 (1034)
T ss_pred hhhhhcccchhhhhcCccccccchHhhhhccCCcCcc
Confidence 888884 6789999999999887766555555553
No 284
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.1e-40 Score=295.75 Aligned_cols=247 Identities=29% Similarity=0.467 Sum_probs=196.4
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++||||+++++++. ++..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 57999999999999999999999999999999875421 22346899999999999999999884 3445
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
++++|||+++ +|.+.+.........+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++.
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~-~~~~~l~dfg~~~ 154 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcC-CCCEEECcchhhh
Confidence 8899999985 7777776554455678999999999999999999999 79999999999999996 7789999999987
Q ss_pred ccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCCHHHHh
Q 017139 186 VLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV--DQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 186 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 262 (376)
....... .....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||.+.... .....+... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~-------- 224 (267)
T cd08229 155 FFSSKTTAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-D-------- 224 (267)
T ss_pred ccccCCcccccccCCcCccCHHHhcCCC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-C--------
Confidence 6543322 22446788999999986544 789999999999999999999999764322 111111110 0
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
.+ ...+...++++.+++.+||..||++|||+.+++
T Consensus 225 ----------~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~ 259 (267)
T cd08229 225 ----------YP--------PLPSDHYSEELRQLVNMCINPDPEKRPDITYVY 259 (267)
T ss_pred ----------CC--------CCCcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence 00 001234688999999999999999999999775
No 285
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-39 Score=289.50 Aligned_cols=246 Identities=33% Similarity=0.577 Sum_probs=203.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+|.+.+.||+|++|.||++.+..+++.|++|.+..... ...+|+++++.++|||++++++++. +...++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 58999999999999999999999999999999865542 2347889999999999999999873 345689
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|||+++ +|.+.+.. ...+++..++.++.|++.||.+||+ +|++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 ~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 149 (254)
T cd06627 76 IILEYAENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTK-DGVVKLADFGVATKL 149 (254)
T ss_pred EEEecCCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECC-CCCEEEeccccceec
Confidence 99999986 56555543 3678999999999999999999999 79999999999999996 788999999998876
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....++..|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+...........
T Consensus 150 ~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-------------- 214 (254)
T cd06627 150 NDVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD-------------- 214 (254)
T ss_pred CCCcccccccccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--------------
Confidence 54332 23456788999999986654 789999999999999999999999876654444332210
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
....++..++..+.+++.+||..+|++|||+.+++.||||
T Consensus 215 --------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 215 --------------DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred --------------CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 0111344678999999999999999999999999999997
No 286
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.2e-40 Score=296.47 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=194.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEc-----CCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
.++|.+.+.||+|+||+||++.+. .++..+|+|.+.... ....+|+++++.++||||+++++++ ..
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~ 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VE 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ec
Confidence 357999999999999999999863 345679999886542 2345799999999999999999988 44
Q ss_pred ceeEEEEeecccc-hHHHHHHhhh---------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYS---------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT 173 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~---------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~ 173 (376)
...+++||||+++ +|.+.+.... .....+++..++.++.|++.||+|||+ +|++||||||+||+++. +
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp~Nili~~-~ 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNCLVGE-N 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEcc-C
Confidence 4558999999984 7766665432 122358999999999999999999999 79999999999999996 7
Q ss_pred CcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 017139 174 HQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 249 (376)
Q Consensus 174 ~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~ 249 (376)
+.+||+|||++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||......+....+
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i 235 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 235 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 8899999999875533221 1123346789999998654 48999999999999999998 99999887766555444
Q ss_pred HHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 250 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
.... . ...+...+.++.+++.+||+.||.+|||+.+++
T Consensus 236 ~~~~--~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~ 273 (288)
T cd05093 236 TQGR--V--------------------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIH 273 (288)
T ss_pred HcCC--c--------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 3310 0 001234688999999999999999999999984
No 287
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.3e-40 Score=294.26 Aligned_cols=249 Identities=24% Similarity=0.311 Sum_probs=196.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCC-----CcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTS 101 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~ 101 (376)
..++|++.+.||+|+||.||+|.+... +..||+|.+..... ...+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~----- 78 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVV----- 78 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----
Confidence 346899999999999999999998644 37899999864432 234688999999999999999988
Q ss_pred CCceeEEEEeeccc-chHHHHHHhhhh------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC
Q 017139 102 KDELFLNLVMEYVP-ETMYRVLKHYSS------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH 174 (376)
Q Consensus 102 ~~~~~~~lv~e~~~-g~l~~~l~~~~~------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~ 174 (376)
......++||||++ ++|...+..... ....+++..+..++.|++.||.|||+ +|++|+||||+||+++. ++
T Consensus 79 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~nill~~-~~ 156 (277)
T cd05032 79 STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNCMVAE-DL 156 (277)
T ss_pred cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheEEEcC-CC
Confidence 44456899999998 577777654322 12347888999999999999999999 79999999999999996 78
Q ss_pred cEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 017139 175 QVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 250 (376)
Q Consensus 175 ~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~ 250 (376)
.+||+|||+++....... .....++..|+|||.+.+.. ++.++|+|||||++|++++ |..||.+.+..+....+.
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 235 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI 235 (277)
T ss_pred CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence 899999999876543221 22334577899999986544 8999999999999999998 999998877655544333
Q ss_pred HhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 251 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.. +. ..++...+.++.+++.+||+.+|++|||+.++++
T Consensus 236 ~~-~~---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 236 DG-GH---------------------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred cC-CC---------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 10 00 0123346889999999999999999999999874
No 288
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6.3e-40 Score=327.35 Aligned_cols=142 Identities=25% Similarity=0.399 Sum_probs=123.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
.++|.+.+.||.|+||.||+|.+..+++.||||++.... .....|+.+++.++||||++++.++ ....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECC
Confidence 578999999999999999999999999999999986542 3345788999999999999999887 4445
Q ss_pred eEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+|+||||+.| +|..++.. ...+++..++.|+.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++
T Consensus 78 ~~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~-~g~vkL~DFGls 151 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISN-EGHIKLTDFGLS 151 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcC-CCCEEEEeCCCC
Confidence 68999999975 66666643 3568899999999999999999999 79999999999999986 788999999987
Q ss_pred c
Q 017139 185 K 185 (376)
Q Consensus 185 ~ 185 (376)
+
T Consensus 152 ~ 152 (669)
T cd05610 152 K 152 (669)
T ss_pred c
Confidence 5
No 289
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=6.7e-40 Score=296.71 Aligned_cols=257 Identities=30% Similarity=0.463 Sum_probs=207.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
..+.|++.+.||+|++|.||+|.+..+++.+++|++..... ....|+++++.++|+||+++++++.. ....|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 91 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLV-----GDELW 91 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCEEE
Confidence 45569999999999999999999998899999999876542 34578999999999999999998843 35589
Q ss_pred EEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+++||++ ++|.+.+.... ..+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 166 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSK-DGSVKLADFGFAAQL 166 (286)
T ss_pred EEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcC-CCCEEECccchhhhh
Confidence 9999999 57777766521 379999999999999999999999 79999999999999996 778999999987654
Q ss_pred ccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 188 VKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 188 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...+.......+... +.+.
T Consensus 167 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~--------- 235 (286)
T cd06614 167 TKEKSKRNSVVGTPYWMAPEVIKRK-DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPP--------- 235 (286)
T ss_pred ccchhhhccccCCcccCCHhHhcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC---------
Confidence 33221 2234567889999998654 4899999999999999999999999877665444433221 0000
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
......++.++.++|.+||+.+|.+|||+.+++.||||++..+
T Consensus 236 ----------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 278 (286)
T cd06614 236 ----------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP 278 (286)
T ss_pred ----------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence 0011236889999999999999999999999999999998443
No 290
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=8.5e-40 Score=318.93 Aligned_cols=282 Identities=22% Similarity=0.278 Sum_probs=185.7
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCC----CcEEEEEEecccccchHHHHHHH---HhCCCCCeeecceeeeecC-CCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLET----GETVAIKKVLQDRRYKNRELQLM---RLMDHPNVISLKHCFFSTT-SKD 103 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~----~~~~aiK~~~~~~~~~~~e~~~l---~~l~h~~Iv~~~~~~~~~~-~~~ 103 (376)
..++|.+.+.||+|+||.||+|.+..+ +..||+|++..... .|..+. +...+.++..+...+.... ...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNERVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHHHHHhhchhhHHHHHHhhhccccccc
Confidence 567999999999999999999999988 99999998754322 222222 2223333443333322211 144
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhh----------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSS----------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~----------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
+..+++||||+++ +|.+.+..... .........+..++.||+.||.|||+ +||+||||||+|
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiHRDLKP~N 285 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVHRDVKPQN 285 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEeCcCCHHH
Confidence 5568899999985 66666643210 01112344577899999999999999 799999999999
Q ss_pred eeecCCCCcEEEEecCCccccccC--CCcceeeccccccChhhhhCCC---------------------CCCccchhHHH
Q 017139 167 LLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRYYRAPELIFGAT---------------------EYTTSIDIWSA 223 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~---------------------~~~~~~Diwsl 223 (376)
||++.+++.+||+|||+++..... .......+++.|+|||.+.... .++.++||||+
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 999865678999999999755332 2223567899999999763221 13445699999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCC
Q 017139 224 GCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQY 303 (376)
Q Consensus 224 G~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 303 (376)
||++|+|+++..++ .+....+...+...+.............. .+... .........+..+.+||.+||++
T Consensus 366 GviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 366 GLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAWRKLVEPRA----SPDLR---RGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHHHHhhcccc----chhhh---hhhhhccccchHHHHHHHHHccC
Confidence 99999999976554 33344444444443332211111111000 00000 00001112345677999999999
Q ss_pred CCCCCCCHHHHhCCCccccccCC
Q 017139 304 SPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 304 dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
||++|||+.++|+||||+.....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCcc
Confidence 99999999999999999876553
No 291
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-39 Score=290.42 Aligned_cols=243 Identities=21% Similarity=0.297 Sum_probs=193.1
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
++|++.+.||+|+||.||+|... .+..+|+|.+.... .....|+.+++.++||||+++++++ .....+++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVC-----TQQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEE-----ccCCCEEEE
Confidence 56999999999999999999875 45679999876442 2345699999999999999999987 444558999
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+++ +|.+.+... ...+++..+..++.|++.||+|||+ +|++|+||+|+||+++. ++.+||+|||.+.....
T Consensus 78 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~-~~~~kl~d~g~~~~~~~ 152 (256)
T cd05114 78 TEFMENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSS-TGVVKVSDFGMTRYVLD 152 (256)
T ss_pred EEcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcC-CCeEEECCCCCccccCC
Confidence 999985 666655431 2458899999999999999999999 79999999999999996 78899999999876533
Q ss_pred CCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 190 GEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 190 ~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... ...++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||...+..+....+......
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~----------- 220 (256)
T cd05114 153 DEYTSSSGAKFPVKWSPPEVFNFS-KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL----------- 220 (256)
T ss_pred CceeccCCCCCchhhCChhhcccC-ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC-----------
Confidence 22211 22335579999998654 48999999999999999999 99999887766665554331000
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+...+.++.+++.+||+.||++||+++++++
T Consensus 221 -----------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 221 -----------------YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -----------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 012235778999999999999999999999874
No 292
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.8e-39 Score=290.71 Aligned_cols=248 Identities=31% Similarity=0.491 Sum_probs=197.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+... .....+|+++++.++|+||+++++++. +...
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 5799999999999999999999999999999987531 223447899999999999999999883 3455
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.++||||+++ +|...+.........+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~-~~~~~l~d~~~~~ 154 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITA-TGVVKLGDLGLGR 154 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECC-CCcEEEeccceee
Confidence 8899999985 7777776654455678999999999999999999999 79999999999999996 7789999999987
Q ss_pred ccccCC-CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHHHHh
Q 017139 186 VLVKGE-ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA--VDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 186 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 262 (376)
...... ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||..... .+....+....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------- 224 (267)
T cd08224 155 FFSSKTTAAHSLVGTPYYMSPERIHEN-GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD--------- 224 (267)
T ss_pred eccCCCcccceecCCccccCHHHhccC-CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC---------
Confidence 654332 22345678899999998654 489999999999999999999999965431 11111111100
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+ ......++.++.++|.+||..+|++|||+.++++
T Consensus 225 ----------~~--------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 225 ----------YP--------PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ----------CC--------CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00 0011246789999999999999999999998863
No 293
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.1e-39 Score=299.40 Aligned_cols=275 Identities=22% Similarity=0.303 Sum_probs=194.4
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.+++.+|.| |.||.+++..+++.||+|++.... ....+|+++++.++|+||+++++++ .+....+++
T Consensus 5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~~ 77 (314)
T cd08216 5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYVV 77 (314)
T ss_pred hhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEEE
Confidence 344444444 556666777799999999986541 2345799999999999999999988 344458999
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+++ ++.+.+... ....+++..+..++.|++.||+|||+ +||+|+||||+||+++. ++.+||+|||.+.....
T Consensus 78 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~-~~~~kl~d~~~~~~~~~ 153 (314)
T cd08216 78 SPLMAYGSCEDLLKTH--FPEGLPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSG-DGKVVLSGLRYSVSMIK 153 (314)
T ss_pred EeccCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEec-CCceEEecCccceeecc
Confidence 999995 565665543 23458899999999999999999999 79999999999999995 78899999998865432
Q ss_pred CCC--------cceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH-
Q 017139 190 GEA--------NISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE- 259 (376)
Q Consensus 190 ~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~- 259 (376)
... .....++..|+|||++.+. ..++.++|+||+||++|+|++|..||..........+... +.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~ 231 (314)
T cd08216 154 HGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR--GTVPCLL 231 (314)
T ss_pred ccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCcccc
Confidence 211 1233457789999998653 3478999999999999999999999987655443322221 110000
Q ss_pred ---HHhhcCcCCc----CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 260 ---EIRCMNPNYT----DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 260 ---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.......... ....+ .............++.++.+|+.+||++||++|||++++|+||||+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~ 303 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHP-NNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR 303 (314)
T ss_pred ccCchhhhcCCcCccccccccc-chhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence 0000000000 00000 00111122233345678999999999999999999999999999997763
No 294
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1e-39 Score=307.54 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=192.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC-----CcEEEEEEeccccc-----chHHHHHHHHhCC-CCCeeecceeeeecCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDRR-----YKNRELQLMRLMD-HPNVISLKHCFFSTTS 101 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~-----~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~ 101 (376)
.++|++++.||+|+||.||+|.+... +..||+|++..... ...+|+++++.+. ||||+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~----- 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC----- 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE-----
Confidence 46899999999999999999987433 34699999865322 2346999999996 99999999988
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhhh-----------------------------------------------------
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYSS----------------------------------------------------- 127 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~~----------------------------------------------------- 127 (376)
.+...+|+|||||++ +|.+.+.....
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 445558999999984 77766654211
Q ss_pred ---------------------------------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCee
Q 017139 128 ---------------------------------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 168 (376)
Q Consensus 128 ---------------------------------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nil 168 (376)
....+++..+..++.|++.||+|||+ ++|+|+||||+||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dikp~Nil 269 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHhEE
Confidence 12357888899999999999999999 79999999999999
Q ss_pred ecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 017139 169 VDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 244 (376)
Q Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 244 (376)
++. ++.+||+|||+++....... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||.......
T Consensus 270 l~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 270 LAQ-GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN-LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred EeC-CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 996 77899999999876543222 1233456789999998764 48999999999999999997 999998765443
Q ss_pred HHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 245 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.....+..... ...+..++.++.+++.+||+.||++|||+.++.+
T Consensus 348 ~~~~~~~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 348 TFYNKIKSGYR---------------------------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHhcCCC---------------------------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 33332221000 0022356889999999999999999999988754
No 295
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-39 Score=290.18 Aligned_cols=245 Identities=19% Similarity=0.273 Sum_probs=193.5
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|++.+.||+|+||.||+|.+.. +..+|+|.+..... ...+|+.+++.++||||+++++++ .....+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 76 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVC-----TKQRPIYI 76 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEE-----ccCCCcEE
Confidence 4579999999999999999998754 45699998865432 245799999999999999999987 33445789
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||+.+ +|.+.+... ...+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||.++...
T Consensus 77 v~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~-~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 77 VTEYMSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDD-QGCVKVSDFGLSRYVL 151 (256)
T ss_pred EEEcCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcC-CCCEEECCCccceecC
Confidence 9999985 566655432 2368999999999999999999999 79999999999999996 7889999999987654
Q ss_pred cCCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 189 KGEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 189 ~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
...... ...++..|+|||.+.+.. ++.++|+|||||++|+|++ |..||...+..+....+......
T Consensus 152 ~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---------- 220 (256)
T cd05113 152 DDEYTSSVGSKFPVRWSPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL---------- 220 (256)
T ss_pred CCceeecCCCccChhhCCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC----------
Confidence 332211 123456799999986544 8999999999999999998 99999877765544444331100
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..+...+..+.+++.+||..||.+||++.+++.+
T Consensus 221 ------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 ------------------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0122357899999999999999999999999864
No 296
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.3e-39 Score=293.46 Aligned_cols=250 Identities=20% Similarity=0.281 Sum_probs=195.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
.++|.+.+.||+|++|.||+|.+.. ++..||+|.+.... ....+|+.+++.++|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 79 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF----- 79 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----
Confidence 4679999999999999999999987 77889999876432 12346889999999999999999873
Q ss_pred CceeEEEEeecccc-hHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC--CcE
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYSS---MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT--HQV 176 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~--~~~ 176 (376)
+....++||||+.| +|.+.+..... ....+++..+..++.||+.||+|||+ ++++|+||||+||+++..+ ..+
T Consensus 80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEeccCCCcce
Confidence 33347899999975 77777655321 12358999999999999999999999 7999999999999997522 369
Q ss_pred EEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q 017139 177 KLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 252 (376)
Q Consensus 177 kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~ 252 (376)
||+|||+++....... ......+..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~ 237 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG 237 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999876532211 11222345799999997654 8999999999999999997 99999887765544332221
Q ss_pred cCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 253 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.. ..++..++..+.+++.+||+.||++|||+.++++|
T Consensus 238 -~~---------------------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 238 -GR---------------------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred -Cc---------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00 01234578899999999999999999999999876
No 297
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-39 Score=290.92 Aligned_cols=244 Identities=25% Similarity=0.344 Sum_probs=194.4
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|++.++||+|+||.||+|... ++..||+|.+.... ....+|+.+++.++|+||+++++++ .+....++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCCcEE
Confidence 467999999999999999999864 56779999876533 2334699999999999999999887 44455889
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||+++ +|.+.+... ....+++..+..++.|++.||+|||+ .|++|+||||+||+++. ++.++|+|||++....
T Consensus 79 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~~~ 154 (261)
T cd05072 79 ITEYMAKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSE-SLMCKIADFGLARVIE 154 (261)
T ss_pred EEecCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecC-CCcEEECCCccceecC
Confidence 9999974 777666542 24568889999999999999999999 79999999999999996 7889999999998654
Q ss_pred cCCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 189 KGEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 189 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+.......+.....
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~----------- 222 (261)
T cd05072 155 DNEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR----------- 222 (261)
T ss_pred CCceeccCCCccceecCCHHHhccC-CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-----------
Confidence 3221 1122345679999998654 48899999999999999998 9999988766555544432110
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
.+ ....++.++.+++.+||..||++||+++++.
T Consensus 223 -------~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 255 (261)
T cd05072 223 -------MP----------RMENCPDELYDIMKTCWKEKAEERPTFDYLQ 255 (261)
T ss_pred -------CC----------CCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 00 1234688999999999999999999999885
No 298
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.5e-39 Score=288.40 Aligned_cols=238 Identities=34% Similarity=0.581 Sum_probs=196.6
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
||.|+||.||++.+..+++.+|+|.+..... ....|+.+++.++||||+++++.+ ..+..+|++|||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 6999999999999998999999998865422 345688999999999999999887 5566699999999
Q ss_pred c-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC-CC
Q 017139 115 P-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-EA 192 (376)
Q Consensus 115 ~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~-~~ 192 (376)
+ ++|.+.+.. ...+++..+..++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||.+...... ..
T Consensus 76 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~~~~~~~ 149 (250)
T cd05123 76 PGGELFSHLSK----EGRFSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDA-DGHIKLTDFGLAKELSSEGSR 149 (250)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcC-CCcEEEeecCcceecccCCCc
Confidence 5 577666654 3468999999999999999999999 79999999999999996 778999999998765443 22
Q ss_pred cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCcc
Q 017139 193 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 272 (376)
Q Consensus 193 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (376)
.....++..|+|||.+.+.. .+.++|+||||+++|++++|..||...+.......+.. ..
T Consensus 150 ~~~~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~----------------- 209 (250)
T cd05123 150 TNTFCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DP----------------- 209 (250)
T ss_pred ccCCcCCccccChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CC-----------------
Confidence 33456788899999986544 78899999999999999999999987765443333322 00
Q ss_pred CCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH---HHHhCCCcc
Q 017139 273 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA---LEACAHPFF 320 (376)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~---~ell~hp~~ 320 (376)
..++..++.++.+++++||..||++||++ +++++||||
T Consensus 210 ----------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 210 ----------LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ----------CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 01334568899999999999999999999 999999998
No 299
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.6e-39 Score=291.89 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=194.5
Q ss_pred eEeeeeeccCCceEEEEEEEcCC---CcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCC-CCce
Q 017139 36 YMAERVVGTGSFGIVFQAKCLET---GETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTS-KDEL 105 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~~~ 105 (376)
|.+++.||+|+||.||+|....+ +..+|+|.+..+.. ...+|+.+++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 57889999999999999997654 47899999865422 23468899999999999999988754332 2344
Q ss_pred eEEEEeecccc-hHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYS--SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
..+++|||+++ +|...+.... .....+++..+..++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~-~~~~kl~dfg 158 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLRE-DMTVCVADFG 158 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECC-CCeEEECCcc
Confidence 57899999985 6666664432 123468999999999999999999999 79999999999999996 7789999999
Q ss_pred CccccccCCCc---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 183 SAKVLVKGEAN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 183 ~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+++........ ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+..+....+.... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~--- 233 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADR-VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN-R--- 233 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccC-CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-C---
Confidence 98865433211 112335679999998654 48999999999999999999 899998877655444333210 0
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...+...+.++.+++.+||..||++|||+.+++.+
T Consensus 234 ------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 234 ------------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ------------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00223568899999999999999999999998753
No 300
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-39 Score=289.37 Aligned_cols=242 Identities=26% Similarity=0.393 Sum_probs=196.9
Q ss_pred eeeccCCceEEEEEEEcCC---CcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLET---GETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|.+... +..+++|.+..... ...+|+++++.++|+||+++++++ .....++++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVC-----TEEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeee-----cCCCceEEEE
Confidence 4799999999999999866 88999999865432 344689999999999999999988 3455689999
Q ss_pred eccc-chHHHHHHhhhhc-----CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 112 EYVP-ETMYRVLKHYSSM-----NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 112 e~~~-g~l~~~l~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
||++ ++|.+.+...... ...+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||.+.
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~-~~~~~l~dfg~~~ 153 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGE-DLVVKISDFGLSR 153 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECC-CCcEEEccccccc
Confidence 9996 5777776653221 3779999999999999999999999 79999999999999996 7889999999998
Q ss_pred ccccCC---CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 186 VLVKGE---ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 186 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
...... ......++..|+|||.+... .++.++|+||+||++|+|++ |..||......+....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--------- 223 (262)
T cd00192 154 DVYDDDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--------- 223 (262)
T ss_pred ccccccccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---------
Confidence 765432 22344567889999998765 48999999999999999999 69999888665555444321
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.....+..+++++.+++.+||+.||++|||+.+++++
T Consensus 224 -------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 224 -------------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -------------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0011234568999999999999999999999999865
No 301
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-39 Score=289.28 Aligned_cols=238 Identities=21% Similarity=0.312 Sum_probs=186.3
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+++++.++||||+++++++ .....+++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCCCCeEEEEeec
Confidence 46899999999999999999999999875432 2345789999999999999999988 3444589999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 193 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (376)
++ +|.+.+.. ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||++.........
T Consensus 76 ~~~~L~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~~~~~~~~ 150 (252)
T cd05084 76 QGGDFLTFLRT---EGPRLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTE-KNVLKISDFGMSREEEDGVYA 150 (252)
T ss_pred cCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcC-CCcEEECccccCccccccccc
Confidence 86 55555543 23468899999999999999999999 79999999999999996 778999999998754322111
Q ss_pred c---eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 194 I---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 194 ~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
. ....+..|+|||.+.+.. ++.++|+|||||++|+|++ |..||...........+.....
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~--------------- 214 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR--------------- 214 (252)
T ss_pred ccCCCCCCceeecCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---------------
Confidence 1 111245699999986654 8999999999999999998 8999976655443332222100
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...+..+.+++.+||+.||++|||+.++++
T Consensus 215 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 215 -------------LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0123346889999999999999999999999863
No 302
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=286.06 Aligned_cols=262 Identities=25% Similarity=0.444 Sum_probs=210.6
Q ss_pred CCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhC-CCCCeeecceeeee
Q 017139 27 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLM-DHPNVISLKHCFFS 98 (376)
Q Consensus 27 ~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l-~h~~Iv~~~~~~~~ 98 (376)
..-.....+|.++++||+|+|++|.+++.+.+.+.||+|++++... -.+.|..+...- +||++|.++.||
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-- 320 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-- 320 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh--
Confidence 3344455789999999999999999999999999999999865422 223566666554 799999999999
Q ss_pred cCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEE
Q 017139 99 TTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL 178 (376)
Q Consensus 99 ~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl 178 (376)
+.+..+++|.||++|+ +++.+. .....++++.++.+..+|+.||.|||+ +||++||||.+|+|++. .+.+||
T Consensus 321 ---qtesrlffvieyv~gg--dlmfhm-qrqrklpeeharfys~ei~lal~flh~-rgiiyrdlkldnvllda-eghikl 392 (593)
T KOG0695|consen 321 ---QTESRLFFVIEYVNGG--DLMFHM-QRQRKLPEEHARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDA-EGHIKL 392 (593)
T ss_pred ---cccceEEEEEEEecCc--ceeeeh-hhhhcCcHHHhhhhhHHHHHHHHHHhh-cCeeeeeccccceEEcc-CCceee
Confidence 6666799999999975 222221 234679999999999999999999999 89999999999999997 778999
Q ss_pred EecCCccccc-cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCC-------CCChHHHHHHHH
Q 017139 179 CDFGSAKVLV-KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFP-------GENAVDQLVEII 250 (376)
Q Consensus 179 ~Dfg~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~-------~~~~~~~~~~~~ 250 (376)
+|+|.++... +.....+++|||.|.|||++.+. .|+..+|+|+||++++||+.|+.||. ..+..+.+.+++
T Consensus 393 tdygmcke~l~~gd~tstfcgtpnyiapeilrge-eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi 471 (593)
T KOG0695|consen 393 TDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE-EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI 471 (593)
T ss_pred cccchhhcCCCCCcccccccCCCcccchhhhccc-ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH
Confidence 9999997654 34456678899999999999875 49999999999999999999999994 223344444433
Q ss_pred HhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC------HHHHhCCCcccccc
Q 017139 251 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT------ALEACAHPFFDELR 324 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~~~~~~ 324 (376)
-. ..++ +|..+|-.+..+++.-|.+||.+|.. ..++..||||+.++
T Consensus 472 le----------------kqir------------iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 472 LE----------------KQIR------------IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred hh----------------hccc------------ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 21 0111 34557778889999999999999975 57999999999998
Q ss_pred CCC
Q 017139 325 EPN 327 (376)
Q Consensus 325 ~~~ 327 (376)
|..
T Consensus 524 wd~ 526 (593)
T KOG0695|consen 524 WDL 526 (593)
T ss_pred HHH
Confidence 863
No 303
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-39 Score=299.33 Aligned_cols=245 Identities=24% Similarity=0.362 Sum_probs=191.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcE----EEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGET----VAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~----~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
..+|++.+.||+|+||.||+|++..+++. ||+|.+.... ....+|+.+++.++||||+++++++...
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---- 81 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 81 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC----
Confidence 35799999999999999999998766664 8999886432 2334688999999999999999987431
Q ss_pred ceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
..++++||+. |+|.+.+... ...+++..+..++.||+.||+|||+ +||+||||||+||+++. ++.+||+|||
T Consensus 82 --~~~~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~-~~~~kl~DfG 154 (316)
T cd05108 82 --TVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKT-PQHVKITDFG 154 (316)
T ss_pred --CceeeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecC-CCcEEEcccc
Confidence 2568999998 4676666542 3468889999999999999999999 79999999999999986 7789999999
Q ss_pred CccccccCCCcce---eeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 183 SAKVLVKGEANIS---YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 183 ~~~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+++.......... ..++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+....+. ..+......
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~--- 229 (316)
T cd05108 155 LAKLLGADEKEYHAEGGKVPIKWMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGER--- 229 (316)
T ss_pred ccccccCCCcceeccCCccceeecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCC---
Confidence 9987654332221 2235679999998664 48999999999999999997 9999987655443 233221100
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.+ .+...+.++.+++.+||..||++||++.+++.+
T Consensus 230 --------------~~----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 230 --------------LP----------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred --------------CC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00 122457789999999999999999999999876
No 304
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.6e-39 Score=295.31 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=195.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC-----CcEEEEEEeccccc-----chHHHHHHHHhC-CCCCeeecceeeeecCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDRR-----YKNRELQLMRLM-DHPNVISLKHCFFSTTS 101 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~-----~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~ 101 (376)
.++|.+.+.||+|+||.||++..... ...+|+|.+..... ...+|+++++.+ +|+||+++++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~----- 85 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC----- 85 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-----
Confidence 46899999999999999999997643 36899998865322 234688999999 899999999987
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCee
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYS------------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 168 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~------------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nil 168 (376)
..+..++++|||+.+ +|...+.... .....+++..+..++.|++.||+|||+ +||+||||||+||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~dlkp~Nil 164 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHRDLAARNVL 164 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCccccccceeeEE
Confidence 444558999999984 7777765421 234578999999999999999999999 79999999999999
Q ss_pred ecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 017139 169 VDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVD 244 (376)
Q Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~ 244 (376)
++. ++.+||+|||+++....... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+....+
T Consensus 165 ~~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 165 VTE-DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EcC-CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccC-CcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 986 78899999999986543321 1122235679999998654 48999999999999999997 999998776655
Q ss_pred HHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 245 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
....+..... ...+...+.++.+|+.+||..||++|||+.+++++
T Consensus 243 ~~~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 243 LFKLLKEGYR----------------------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHcCCc----------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 4443322100 00223468899999999999999999999999864
No 305
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.6e-39 Score=289.39 Aligned_cols=244 Identities=19% Similarity=0.286 Sum_probs=193.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.+|++.+.||+|+||.||+|.+. ++..+|+|.+..... ...+|+++++.++||||+++++++ ......|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceEEE
Confidence 35899999999999999999875 466899998865432 344699999999999999999887 444568999
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+++ +|.+.+... ...+++..+..++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||+++...+
T Consensus 78 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~-~~~~kl~dfg~~~~~~~ 152 (256)
T cd05059 78 TEYMANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGE-DNVVKVSDFGLARYVLD 152 (256)
T ss_pred EecCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECC-CCcEEECCcccceeccc
Confidence 999985 666666532 2468999999999999999999999 79999999999999996 78899999999876543
Q ss_pred CCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 190 GEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 190 ~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
..... ...++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+.....
T Consensus 153 ~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------ 219 (256)
T cd05059 153 DQYTSSQGTKFPVKWAPPEVFDYS-RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR------------ 219 (256)
T ss_pred ccccccCCCCCCccccCHHHhccC-CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc------------
Confidence 22111 11224479999998764 48999999999999999998 8999987766555444322100
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...+...+.++.+++.+||..+|++|||+.++++.
T Consensus 220 ----------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 ----------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 01223468899999999999999999999999853
No 306
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-39 Score=293.38 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=194.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEc----CCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCL----ETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~----~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
.++|++.+.||+|+||+||+|... .++..+++|.+.... ....+|+.+++.++||||+++++++ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~ 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVV-----TQ 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEE-----ec
Confidence 467999999999999999999853 356789999886432 2345799999999999999999987 33
Q ss_pred ceeEEEEeecccc-hHHHHHHhhh-------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeee
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYS-------------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 169 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~-------------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill 169 (376)
....|+||||+++ +|.+.+.... .....+++..+..++.|++.||.|||+ +|++|+||||+||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~nili 157 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAARNILI 157 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhccccceEEE
Confidence 4458899999985 6666664211 012357888999999999999999999 799999999999999
Q ss_pred cCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHH
Q 017139 170 DPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQ 245 (376)
Q Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~ 245 (376)
+. ++.+||+|||+++....... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+....
T Consensus 158 ~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 158 GE-QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG-KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred cC-CCcEEeccccccccccCCcceecccCCCccceecChHHhccC-CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 96 77899999999976533221 2233446679999998654 48999999999999999998 9999988765544
Q ss_pred HHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 246 LVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...+.... .+ ..+..+++.+.+++.+||+.||.+||++.+++++
T Consensus 236 ~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 236 IEMVRKRQ-LL---------------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHcCC-cC---------------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 44332210 00 0234578899999999999999999999998764
No 307
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.5e-40 Score=295.24 Aligned_cols=248 Identities=21% Similarity=0.267 Sum_probs=195.0
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC-----CcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET-----GETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~-----~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
..+|.+.+.||.|+||.||+|.+..+ ++.||+|++..... ...+|+.++..++||||+++++++ .
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~ 78 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV-----T 78 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----c
Confidence 34689999999999999999987543 57899999875432 234688899999999999999988 3
Q ss_pred CceeEEEEeecccc-hHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeee
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYS------------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 169 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~------------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill 169 (376)
.....++++||+.+ +|...+.... .....+++..+..++.|++.||.|||+ +|++||||||+||++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~Nil~ 157 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATRNVLV 157 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchhheEe
Confidence 44458899999985 6665653211 113458888999999999999999999 799999999999999
Q ss_pred cCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHH
Q 017139 170 DPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQ 245 (376)
Q Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~ 245 (376)
+. ++.+||+|||+++....... .....+++.|+|||.+.+.. ++.++|+|||||++|+|++ |..||.+....+.
T Consensus 158 ~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05091 158 FD-KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 235 (283)
T ss_pred cC-CCceEecccccccccccchheeeccCccCCccccCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 85 77899999999876533221 12233467899999986554 8999999999999999998 8899988776665
Q ss_pred HHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 246 LVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...... .++...+.++.+++.+||+.||++||++.++++
T Consensus 236 ~~~i~~~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 236 IEMIRNRQVL----------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHHHcCCcC----------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 5544432110 123457889999999999999999999999975
No 308
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.4e-39 Score=289.08 Aligned_cols=244 Identities=23% Similarity=0.320 Sum_probs=194.1
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|++.+.||+|++|.||+|.+. +++.||+|.+.... ....+|+.+++.++||||+++++++ .....+|+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC-----TLEEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEE-----ecCCCeee
Confidence 457999999999999999999865 45789999986543 2345789999999999999999987 34445889
Q ss_pred Eeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||++ ++|.+.+.... +..+++..+..++.|++.||.+||+ +|++|+||||+||+++. ++.++|+|||++....
T Consensus 79 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 79 VTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGE-NNICKVADFGLARVIK 154 (261)
T ss_pred eeecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcC-CCCEEECCcceEEEcc
Confidence 999996 57777665422 3568999999999999999999999 79999999999999996 7789999999998765
Q ss_pred cCCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 189 KGEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 189 ~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
...... ....+..|+|||.+.+. .++.++|+||||+++|+|++ |+.||.+.+.......+......
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------- 223 (261)
T cd05068 155 EDIYEAREGAKFPIKWTAPEAALYN-RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM---------- 223 (261)
T ss_pred CCcccccCCCcCceeccCccccccC-CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------
Confidence 322111 11223579999988654 48999999999999999999 99999887766555444321100
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
..+...+..+.+++.+||+.||++||++.+++
T Consensus 224 ------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~ 255 (261)
T cd05068 224 ------------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQ 255 (261)
T ss_pred ------------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 01234688999999999999999999999986
No 309
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-41 Score=314.52 Aligned_cols=206 Identities=27% Similarity=0.402 Sum_probs=171.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecC-CCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTT-SKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~-~~~~~~~ 107 (376)
.-|...+.||+|+||.||+++++.+|+.||||.+.... ...-+|++++++++|+|||++.++--+.. ..-....
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 44888999999999999999999999999999986632 23347999999999999999987642111 0002234
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCC---CCcEEEEecCC
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL---THQVKLCDFGS 183 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~---~~~~kl~Dfg~ 183 (376)
.+|||||.| +|...+.. -.....+++.+++.++..+..||.|||+ +||+||||||.||++-.. ....||+|||.
T Consensus 93 vlvmEyC~gGsL~~~L~~-PEN~~GLpE~e~l~lL~d~~~al~~LrE-n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNS-PENAYGLPESEFLDLLSDLVSALRHLRE-NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred eEEEeecCCCcHHHHhcC-cccccCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 699999996 66666654 3345679999999999999999999999 899999999999998421 33689999999
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 241 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~ 241 (376)
|+...++....+.+||+.|.+||++..+..|+..+|.|||||++|+.+||..||-...
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 9999999989999999999999999755679999999999999999999999996543
No 310
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.9e-39 Score=292.08 Aligned_cols=258 Identities=27% Similarity=0.359 Sum_probs=190.0
Q ss_pred cce-EeeeeeccCCceEEEEEE----EcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 34 ISY-MAERVVGTGSFGIVFQAK----CLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 34 ~~y-~~~~~Lg~G~~g~V~~~~----~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
++| .+.+.||+|+||+||++. ...++..+|+|.+.... ....+|+++++.++||||+++++++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CC
Confidence 456 899999999999998865 33568899999986542 233469999999999999999987643 23
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
...++++|||+++ +|.+.+.. ..+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~-~~~~~l~dfg 152 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDN-DRLVKIGDFG 152 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcC-CCcEEEeecc
Confidence 4458899999996 55555543 459999999999999999999999 79999999999999996 7789999999
Q ss_pred CccccccCCC----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh-cCCCC
Q 017139 183 SAKVLVKGEA----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-LGTPT 257 (376)
Q Consensus 183 ~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~ 257 (376)
++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++|..||...... ....... .+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~ 229 (283)
T cd05080 153 LAKAVPEGHEYYRVREDGDSPVFWYAVECLKEN-KFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMT 229 (283)
T ss_pred cccccCCcchhhccCCCCCCCceeeCHhHhccc-CCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccc
Confidence 9876543222 1122346679999998654 4899999999999999999999998654321 1111110 00000
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+... .........+...+.++.+++.+||+.||++|||++++++
T Consensus 230 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 230 VVRLIEL------------LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhhhhh------------hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0000000 0000111134467899999999999999999999999874
No 311
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4e-39 Score=287.92 Aligned_cols=243 Identities=26% Similarity=0.334 Sum_probs=191.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
++|++.++||+|+||.||+|.+..+ ..+|+|++..... ...+|+++++.++||||+++++.+ .+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-----~~-~~~~lv 78 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-----SE-EPIYIV 78 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEE-----CC-CCcEEE
Confidence 5799999999999999999998665 4599999875332 345799999999999999998765 22 236899
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+++ +|.+.+... ....+++..+..++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||.+.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~-~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 79 TEYMSKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGE-NLVCKVADFGLARLIED 154 (262)
T ss_pred EEcCCCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcC-CCcEEeccCCceeeccc
Confidence 999985 776666532 23457899999999999999999999 79999999999999996 77899999999876543
Q ss_pred CCCc--ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 190 GEAN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 190 ~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ....++..|+|||...+. .++.++|+|||||++|+|++ |..||.+....+....+......
T Consensus 155 ~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------- 222 (262)
T cd05071 155 NEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM----------- 222 (262)
T ss_pred cccccccCCcccceecCHhHhccC-CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC-----------
Confidence 3221 123346679999988654 48999999999999999999 88999877665554433221000
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+..++..+.+++.+||+.||++||++.++++
T Consensus 223 -----------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 223 -----------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -----------------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 012346889999999999999999999998763
No 312
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-39 Score=290.70 Aligned_cols=246 Identities=23% Similarity=0.323 Sum_probs=198.7
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
...+|++.+.||.|+||.||+|.+.. ++.+|+|.+..... ....|+.+++.++||||+++++++ .+...+
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-----SVGEPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE-----ecCCCe
Confidence 34579999999999999999999877 88999999865533 345688999999999999999887 344458
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++||||+++ +|.+.+... ....+++..++.++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||.+..
T Consensus 78 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~-~~~~kl~d~g~~~~ 153 (261)
T cd05148 78 YIITELMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGE-DLVCKVADFGLARL 153 (261)
T ss_pred EEEEeecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcC-CceEEEccccchhh
Confidence 899999985 777777643 24568999999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 187 LVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
...... .....++..|+|||.+... .++.++|+||||+++|+|++ |..||.+.+..+.+..+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 223 (261)
T cd05148 154 IKEDVYLSSDKKIPYKWTAPEAASHG-TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM--------- 223 (261)
T ss_pred cCCccccccCCCCceEecCHHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC---------
Confidence 543221 1123346679999998654 48899999999999999998 89999887766665554431100
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+...++.+.+++.+||+.||++|||+.++++
T Consensus 224 -------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 -------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 022356889999999999999999999999864
No 313
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.8e-39 Score=288.00 Aligned_cols=246 Identities=23% Similarity=0.294 Sum_probs=193.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC---CcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET---GETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.++|++.+.||+|+||.||+|.+..+ ...+|+|.+..... ...+|+.+++.++||||+++++.+ .+.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecC
Confidence 35799999999999999999998654 45799998865432 233588999999999999999987 344
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..++++|||+++ +|.+.+.. ....+++..+..++.|++.||.|||+ +||+|+||||+||+++. ++.++|+|||+
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~-~~~~~l~dfg~ 152 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRE---NDGKFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNS-NLVCKVSDFGL 152 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcC-CCCEEECccch
Confidence 558899999986 66666543 23478999999999999999999999 79999999999999996 77899999999
Q ss_pred ccccccCCCc-c--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 184 AKVLVKGEAN-I--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 184 ~~~~~~~~~~-~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
+......... . ...++..|+|||.+.+. .++.++|+||||+++|+|++ |..||......+....+......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---- 227 (266)
T cd05033 153 SRRLEDSEATYTTKGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL---- 227 (266)
T ss_pred hhcccccccceeccCCCCCccccChhhhccC-CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----
Confidence 9876422211 1 12235679999998654 48999999999999999998 99999776655544433321000
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..+...++.+.+++.+||+.||++||++.+++++
T Consensus 228 ------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 228 ------------------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ------------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0123568899999999999999999999998754
No 314
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.9e-39 Score=294.01 Aligned_cols=256 Identities=29% Similarity=0.469 Sum_probs=198.0
Q ss_pred ceEeeeeeccCCceEEEEEEEc---CCCcEEEEEEecccc--------cchHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 35 SYMAERVVGTGSFGIVFQAKCL---ETGETVAIKKVLQDR--------RYKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~~--------~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
+|.+.+.||.|+||.||+|++. .+++.+|+|.+.+.. .....|+.++.++ +||||+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4899999999999999999864 467889999886421 2234688999999 599999999887 4
Q ss_pred CceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
.+..+|+||||+++ +|...+.. ...+++..++.++.|++.+|.|||+ .|++|+||+|+||+++. ++.++|+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~-~~~~~l~df 149 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDS-EGHVVLTDF 149 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECC-CCCEEEEEC
Confidence 45568999999986 55555443 3568999999999999999999999 79999999999999996 778999999
Q ss_pred CCccccccCCC--cceeeccccccChhhhhCCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 182 GSAKVLVKGEA--NISYICSRYYRAPELIFGAT-EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 182 g~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
|++........ .....++..|+|||.+.+.. ..+.++|+||||+++|+|++|..||...+.......+.+.....
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-- 227 (288)
T cd05583 150 GLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS-- 227 (288)
T ss_pred ccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--
Confidence 99876543322 22345788999999986532 36789999999999999999999996543222222221110000
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC---HHHHhCCCccccccCC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT---ALEACAHPFFDELREP 326 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~~~~~~~~ 326 (376)
....+..++.++.++|.+||+.||++||| +.++|+||||+.+.++
T Consensus 228 -----------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~ 275 (288)
T cd05583 228 -----------------------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWD 275 (288)
T ss_pred -----------------------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHH
Confidence 00123346889999999999999999998 5678999999998775
No 315
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4e-39 Score=289.37 Aligned_cols=251 Identities=20% Similarity=0.254 Sum_probs=191.7
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCc--EEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCC-CCcee
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGE--TVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTS-KDELF 106 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~-~~~~~ 106 (376)
|.+++.||+|+||.||+|.+..++. .+|+|.+.... ....+|..+++.++||||++++++++.... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3578899999999999999887775 58999875431 223468899999999999999987643321 12234
Q ss_pred EEEEeecccc-hHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 107 LNLVMEYVPE-TMYRVLKHYS--SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
.+++|||+.+ +|...+.... .....+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~ 158 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNE-NMNVCVADFGL 158 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcC-CCCEEECCCCc
Confidence 7899999984 6665553221 123458999999999999999999999 79999999999999986 77899999999
Q ss_pred ccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 184 AKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 184 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
++....... .....+++.|++||.+.+. .++.++|+|||||++|+|++ |..||.+....+....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~----- 232 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADR-VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR----- 232 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCC-CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC-----
Confidence 987543321 1122346789999998654 48999999999999999999 8999987766544443322100
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...+..++..+.++|.+||+.||++|||+++++++
T Consensus 233 -----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 -----------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -----------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00223467889999999999999999999998754
No 316
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.5e-39 Score=293.39 Aligned_cols=255 Identities=19% Similarity=0.229 Sum_probs=195.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCC----------------cEEEEEEecccc-----cchHHHHHHHHhCCCCCeee
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETG----------------ETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVIS 91 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~----------------~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~ 91 (376)
..+|++++.||+|+||.||+|.+...+ ..+|+|.+.... ....+|+++++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 467999999999999999999876543 468999886543 23346899999999999999
Q ss_pred cceeeeecCCCCceeEEEEeecccc-hHHHHHHhhhh-------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCC
Q 017139 92 LKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSS-------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVK 163 (376)
Q Consensus 92 ~~~~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlk 163 (376)
+++++ ..+..++++|||+.+ +|...+..... ....+++..++.++.|++.||.|||+ +|++|+|||
T Consensus 84 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~i~H~dlk 157 (296)
T cd05051 84 LLGVC-----TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LNFVHRDLA 157 (296)
T ss_pred EEEEE-----ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cCccccccc
Confidence 99988 334558899999985 67776655331 12368999999999999999999999 799999999
Q ss_pred CCCeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh--CCCCCC
Q 017139 164 PQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFP 238 (376)
Q Consensus 164 p~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt--g~~pf~ 238 (376)
|+||+++. ++.++|+|||+++....... .....+++.|+|||.+.+. .++.++|||||||++|+|++ |..||.
T Consensus 158 p~Nili~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 158 TRNCLVGK-NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG-KFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred hhceeecC-CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcC-CCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 99999996 78899999999876433221 1233456789999998654 48999999999999999998 778887
Q ss_pred CCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 239 GENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+..+.+........... .......+...+.++.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 236 HLTDQQVIENAGHFFRDDG---------------------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred CcChHHHHHHHHhcccccc---------------------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 7666555544433211100 00000122346789999999999999999999999953
No 317
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.9e-39 Score=292.46 Aligned_cols=248 Identities=23% Similarity=0.334 Sum_probs=194.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
..+|.+.+.||+|+||.||+|++.. ++..+++|.+.... ....+|+.+++.++||||+++++++ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~ 78 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----GD 78 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE-----cc
Confidence 3569999999999999999998643 45569999886543 2355789999999999999999988 44
Q ss_pred ceeEEEEeecccc-hHHHHHHhhh------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYS------------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 170 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~------------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~ 170 (376)
...+++||||+++ +|.+.+.... .....+++..++.++.||+.||+|||+ +|++||||||+||+++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLATRNCLVG 157 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEc
Confidence 4558999999984 7776665422 122458999999999999999999999 7999999999999999
Q ss_pred CCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 017139 171 PLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQL 246 (376)
Q Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~ 246 (376)
. ++.++|+|||++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+..
T Consensus 158 ~-~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 235 (291)
T cd05094 158 A-NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 235 (291)
T ss_pred c-CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 6 78899999999876543221 2234457789999998764 48999999999999999999 99999877665544
Q ss_pred HHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 247 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+... .. + ..+...+..+.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~--~~-----------------~---------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 236 ECITQG--RV-----------------L---------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHhCC--CC-----------------C---------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 432210 00 0 012346789999999999999999999999863
No 318
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.4e-39 Score=286.02 Aligned_cols=243 Identities=21% Similarity=0.305 Sum_probs=192.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc--chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.++|.+.+.||+|+||.||++.. .|..+|+|.+..+.. ....|+.+++.++|+|+++++++++. .+..++++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~lv 78 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYIV 78 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCceEEE
Confidence 35799999999999999999976 478899998865433 34579999999999999999987642 33347899
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+++ +|.+.+... ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.+||+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 79 TEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSE-DNVAKVSDFGLTKEASS 154 (256)
T ss_pred EECCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcC-CCcEEecCCccceeccc
Confidence 999985 777766542 22458899999999999999999999 79999999999999996 78899999999875433
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
.. ....++..|+|||++.+. .++.++|+|||||++|+|++ |..||...+..+....+.+..
T Consensus 155 ~~--~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--------------- 216 (256)
T cd05082 155 TQ--DTGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--------------- 216 (256)
T ss_pred cC--CCCccceeecCHHHHccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC---------------
Confidence 22 223345679999998654 48999999999999999997 999998766544443332210
Q ss_pred cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 269 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
....+..+++.+.+++.+||..||++|||+.++++
T Consensus 217 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 217 -------------KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -------------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00123457899999999999999999999999864
No 319
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.3e-39 Score=292.56 Aligned_cols=249 Identities=24% Similarity=0.363 Sum_probs=194.7
Q ss_pred ccccceEeeeeeccCCceEEEEEEEc-----CCCcEEEEEEeccccc-----chHHHHHHHHhC-CCCCeeecceeeeec
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDRR-----YKNRELQLMRLM-DHPNVISLKHCFFST 99 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l-~h~~Iv~~~~~~~~~ 99 (376)
...++|.+.+.||+|+||.||+|.+. .++..+|+|.+..... ...+|+.+++++ +||||+++++++
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--- 108 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC--- 108 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE---
Confidence 45578999999999999999999853 3456899998865422 244699999999 799999999988
Q ss_pred CCCCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEE
Q 017139 100 TSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL 178 (376)
Q Consensus 100 ~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl 178 (376)
.....++++|||++ ++|.+.+... ....+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++.++|
T Consensus 109 --~~~~~~~lv~e~~~~~~L~~~i~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~-~~~~~l 182 (302)
T cd05055 109 --TIGGPILVITEYCCYGDLLNFLRRK--RESFLTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTH-GKIVKI 182 (302)
T ss_pred --ecCCceEEEEEcCCCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcC-CCeEEE
Confidence 33445899999998 4676666532 12348999999999999999999999 79999999999999985 778999
Q ss_pred EecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 017139 179 CDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG 254 (376)
Q Consensus 179 ~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 254 (376)
+|||++........ .....++..|+|||.+.+.. ++.++|+||+||++|+|++ |..||.+....+..........
T Consensus 183 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~ 261 (302)
T cd05055 183 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY 261 (302)
T ss_pred CCCcccccccCCCceeecCCCCcccccCCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC
Confidence 99999876543321 11233467899999986654 8999999999999999998 9999987765544443332100
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
....+...++++.+++.+||..+|++|||+.++++
T Consensus 262 ---------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 262 ---------------------------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred ---------------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 00012346889999999999999999999999874
No 320
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.5e-39 Score=294.33 Aligned_cols=249 Identities=22% Similarity=0.339 Sum_probs=192.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcC-------CCcEEEEEEeccccc-----chHHHHHHHHhC-CCCCeeecceeeeec
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLE-------TGETVAIKKVLQDRR-----YKNRELQLMRLM-DHPNVISLKHCFFST 99 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~-----~~~~e~~~l~~l-~h~~Iv~~~~~~~~~ 99 (376)
.++|.+.+.||+|+||.||+|++.. +...+|+|.+..+.. ....|+.+++.+ +||||+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~--- 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--- 93 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence 4789999999999999999998643 235699998875422 234588899988 799999999988
Q ss_pred CCCCceeEEEEeecccc-hHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 100 TSKDELFLNLVMEYVPE-TMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 100 ~~~~~~~~~lv~e~~~g-~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
.....+|+||||+++ +|.+.+..... ....+++..+..++.|++.||+|||+ +|++||||||+|
T Consensus 94 --~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~N 170 (307)
T cd05098 94 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIHRDLAARN 170 (307)
T ss_pred --ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHHh
Confidence 444458899999985 77777765321 12358889999999999999999999 799999999999
Q ss_pred eeecCCCCcEEEEecCCccccccCCCc---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 017139 167 LLVDPLTHQVKLCDFGSAKVLVKGEAN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENA 242 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~ 242 (376)
|+++. ++.+||+|||.+......... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+.+.
T Consensus 171 ill~~-~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 171 VLVTE-DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred eEEcC-CCcEEECCCcccccccccchhhccccCCCccceeChHHhccC-CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 99996 778999999998765432111 112234679999998764 48999999999999999998 8899977665
Q ss_pred HHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 243 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.+....+... . ....+...+.++.+++.+||..+|++|||+.+++++
T Consensus 249 ~~~~~~~~~~-~---------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 249 EELFKLLKEG-H---------------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHHHHcC-C---------------------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 4433332210 0 001233568899999999999999999999998753
No 321
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=310.99 Aligned_cols=268 Identities=27% Similarity=0.393 Sum_probs=220.8
Q ss_pred CCCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhC-CCCCeeecceeeeecCC
Q 017139 26 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLM-DHPNVISLKHCFFSTTS 101 (376)
Q Consensus 26 ~~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~ 101 (376)
...-|...+-|+|.+++|.|.+|+||+++.+.+++..|+|+...+.. ..+.|.++++.. .|||++.++++|.-...
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 33456667789999999999999999999999999999999865543 344677888877 59999999999977666
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEe
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCD 180 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~D 180 (376)
..+..++||||||+| +..++++... +.++.|..+..|++.++.||.+||. +.++|||||-.|||++. ++.|||+|
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~-e~~VKLvD 166 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTE-NAEVKLVD 166 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEec-cCcEEEee
Confidence 667789999999995 6666666655 7889999999999999999999999 79999999999999997 77899999
Q ss_pred cCCccccccC-CCcceeeccccccChhhhhCCC----CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q 017139 181 FGSAKVLVKG-EANISYICSRYYRAPELIFGAT----EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 255 (376)
Q Consensus 181 fg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~----~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~ 255 (376)
||.+...... ....+.+|||+|||||++.... .|+..+|+||||++..||.-|.+|+-+..+...+..|..
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpR---- 242 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR---- 242 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCC----
Confidence 9988665443 3456788999999999996543 267789999999999999999999987766544433221
Q ss_pred CCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 256 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
..|....-+++.+.++.+||..||.+|-.+||+..++|.|||+++.
T Consensus 243 ----------------------NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 243 ----------------------NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred ----------------------CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 1112222345678899999999999999999999999999999843
No 322
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.4e-39 Score=290.91 Aligned_cols=246 Identities=23% Similarity=0.353 Sum_probs=190.7
Q ss_pred ceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
+|++.+.||+|+||.||+|.+.. ....+++|.+..... ...+|+.+++.++||||+++++.+ ...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC-----SQD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecC
Confidence 48899999999999999998753 235688888764432 244689999999999999999987 444
Q ss_pred eeEEEEeeccc-chHHHHHHhhh--------------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCC
Q 017139 105 LFLNLVMEYVP-ETMYRVLKHYS--------------------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVK 163 (376)
Q Consensus 105 ~~~~lv~e~~~-g~l~~~l~~~~--------------------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlk 163 (376)
...++++||+. ++|.+.+.... .....+++..+..++.|++.||+|||+ +|++|||||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~ivH~dik 154 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKLVHRDLA 154 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCeehhhhh
Confidence 45889999999 46666665421 112458899999999999999999999 799999999
Q ss_pred CCCeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCC
Q 017139 164 PQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPG 239 (376)
Q Consensus 164 p~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~ 239 (376)
|+||+++. ++.+||+|||+++....... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+
T Consensus 155 p~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAE-GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcC-CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccC-CcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999986 78899999999876533221 1122346689999998654 48999999999999999998 9999987
Q ss_pred CChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 240 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.............. ....+..++.++.+++.+||+.||++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 233 IAPERLFNLLKTGY----------------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCHHHHHHHHhCCC----------------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 76554333222100 00123457889999999999999999999999863
No 323
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=9.9e-39 Score=284.99 Aligned_cols=243 Identities=24% Similarity=0.324 Sum_probs=192.4
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+..... ...+|+.+++.++|+||+++++++ .+ ...++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-----~~-~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVV-----SE-EPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEE-----CC-CCcEE
Confidence 468999999999999999999865 556799998865322 345799999999999999998876 22 22679
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||+++ +|.+.+... ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||++....
T Consensus 78 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~-~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 78 VTEYMSKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGD-GLVCKIADFGLARLIE 153 (260)
T ss_pred EEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeC-CceEEeCCceeeeecc
Confidence 9999985 676666532 23568999999999999999999999 79999999999999996 7889999999997654
Q ss_pred cCCCc--ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 189 KGEAN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 189 ~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
..... ....++..|+|||.+.+. .++.++|+||||+++|+|++ |..||.+.+..+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~----------- 221 (260)
T cd05070 154 DNEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR----------- 221 (260)
T ss_pred CcccccccCCCCCccccChHHHhcC-CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----------
Confidence 32211 122345679999998654 48999999999999999999 8999988776655544432100
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
...+...+..+.+++.+||..||++|||+++++
T Consensus 222 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 222 -----------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred -----------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 012235688999999999999999999999886
No 324
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-38 Score=284.06 Aligned_cols=242 Identities=24% Similarity=0.354 Sum_probs=194.1
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|.+.+.||.|+||.||+|.. .|+.+|+|.+..... ...+|+.+++.++|+||+++++++. +....++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 77 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLYI 77 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeEE
Confidence 35799999999999999999987 478999999976644 3446899999999999999999883 3445889
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
||||+++ +|.+.+... ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.++|+|||.++...
T Consensus 78 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~-~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 78 VTEYMAKGSLVDYLRSR--GRAVITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSE-DLVAKVSDFGLAKEAS 153 (256)
T ss_pred EEEecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeC-CCCEEEcccccccccc
Confidence 9999994 777766542 12368999999999999999999999 79999999999999996 7889999999998763
Q ss_pred cCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 189 KGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 189 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
.... ....+..|+|||.+.+. .++.++|+||||+++|+|++ |..||...+..+....+....
T Consensus 154 ~~~~--~~~~~~~~~ape~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd05039 154 QGQD--SGKLPVKWTAPEALREK-KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-------------- 216 (256)
T ss_pred cccc--cCCCcccccCchhhcCC-cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 2222 23345679999998654 48899999999999999997 999998776554433322110
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
....+...++++.++|.+||..+|++|||+.+++.
T Consensus 217 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 217 --------------RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred --------------CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00122346889999999999999999999999874
No 325
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-38 Score=292.15 Aligned_cols=249 Identities=23% Similarity=0.339 Sum_probs=193.4
Q ss_pred cccceEeeeeeccCCceEEEEEEEcC-------CCcEEEEEEeccccc-----chHHHHHHHHhC-CCCCeeecceeeee
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLE-------TGETVAIKKVLQDRR-----YKNRELQLMRLM-DHPNVISLKHCFFS 98 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~-----~~~~e~~~l~~l-~h~~Iv~~~~~~~~ 98 (376)
..++|.+.+.||+|+||.||+|++.. ....+|+|.+..... ....|+.+++.+ +||||+++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-- 87 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC-- 87 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE--
Confidence 34689999999999999999998642 345799998864322 234688899988 699999999988
Q ss_pred cCCCCceeEEEEeecccc-hHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCC
Q 017139 99 TTSKDELFLNLVMEYVPE-TMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQ 165 (376)
Q Consensus 99 ~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~ 165 (376)
.+...+|++|||+++ +|...+..... ....+++..+..++.|++.||.|||+ +|++||||||+
T Consensus 88 ---~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~ 163 (314)
T cd05099 88 ---TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIHRDLAAR 163 (314)
T ss_pred ---ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeeeccccce
Confidence 344558999999984 77777765321 23458899999999999999999999 79999999999
Q ss_pred CeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCC
Q 017139 166 NLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGEN 241 (376)
Q Consensus 166 Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~ 241 (376)
||+++. ++.+||+|||+++....... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+..
T Consensus 164 Nill~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 164 NVLVTE-DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR-VYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred eEEEcC-CCcEEEccccccccccccccccccccCCCCccccCHHHHccC-CcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 999986 77899999999976543211 1112234579999998664 48999999999999999999 899998776
Q ss_pred hHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 242 AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+....+..... ...+..++.++.+++.+||..||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 242 VEELFKLLREGHR----------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHHHcCCC----------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6554443322100 0022356889999999999999999999999874
No 326
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.3e-39 Score=298.18 Aligned_cols=251 Identities=25% Similarity=0.362 Sum_probs=190.7
Q ss_pred ccceEeeeeeccCCceEEEEEEE-----cCCCcEEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKC-----LETGETVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTTS 101 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~ 101 (376)
.++|++.+.||.|+||.||+|.+ ..+++.||||.+.... ....+|+.++..+ +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--- 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence 35799999999999999999985 3467899999986532 1234699999999 68999999987742
Q ss_pred CCceeEEEEeecccc-hHHHHHHhhhh-----------------------------------------------------
Q 017139 102 KDELFLNLVMEYVPE-TMYRVLKHYSS----------------------------------------------------- 127 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g-~l~~~l~~~~~----------------------------------------------------- 127 (376)
.+..++++||||++ +|.+.+.....
T Consensus 83 -~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 83 -PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred -CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 23457899999995 67666643210
Q ss_pred ----------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC---cc
Q 017139 128 ----------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NI 194 (376)
Q Consensus 128 ----------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~ 194 (376)
....+++..+..++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||++........ ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~-~~~~kl~dfg~~~~~~~~~~~~~~~ 239 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSE-NNVVKICDFGLARDIYKDPDYVRKG 239 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcC-CCcEEEEecccccccccCcchhhcC
Confidence 01246788889999999999999999 79999999999999996 77899999999876432211 11
Q ss_pred eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccC
Q 017139 195 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 273 (376)
Q Consensus 195 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (376)
...++..|+|||.+.+. .++.++|+|||||++|+|++ |..||............+.....+
T Consensus 240 ~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------- 301 (343)
T cd05103 240 DARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM----------------- 301 (343)
T ss_pred CCCCCcceECcHHhcCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC-----------------
Confidence 22345679999998664 48999999999999999997 999997754433332222110000
Q ss_pred CCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 274 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..+...++++.+++.+||+.||++|||+.++++|
T Consensus 302 ----------~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 302 ----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0122357889999999999999999999999876
No 327
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-38 Score=283.69 Aligned_cols=242 Identities=24% Similarity=0.316 Sum_probs=191.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
++|.+.+.||+|++|.||+|.+..+ ..+|+|.+..... ...+|+.+++.++|||++++++++ .+ ...+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~-~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV-----SE-EPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEE-----cC-CCcEEE
Confidence 5799999999999999999987655 4699998765432 234699999999999999998876 22 236799
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+.+ +|.+.+... ....+++..+..++.|++.||.|||+ .|++|+||+|+||+++. ++.++|+|||++.....
T Consensus 79 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~-~~~~~l~dfg~~~~~~~ 154 (260)
T cd05069 79 TEFMGKGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGD-NLVCKIADFGLARLIED 154 (260)
T ss_pred EEcCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcC-CCeEEECCCccceEccC
Confidence 999985 777777542 23457899999999999999999999 79999999999999996 78899999999976533
Q ss_pred CCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 190 GEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 190 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
... .....++..|+|||...+. .++.++|+|||||++|+|++ |..||.+....+....+.... .+
T Consensus 155 ~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~---------- 222 (260)
T cd05069 155 NEYTARQGAKFPIKWTAPEAALYG-RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-RM---------- 222 (260)
T ss_pred CcccccCCCccchhhCCHHHhccC-CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CC----------
Confidence 221 1123346679999988654 48999999999999999999 999998877665554433210 00
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
..+...+..+.+++.+||.+||++||++++++
T Consensus 223 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 254 (260)
T cd05069 223 -----------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQ 254 (260)
T ss_pred -----------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 12235688999999999999999999999886
No 328
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.7e-39 Score=291.49 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=192.2
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCC--------------cEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecc
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETG--------------ETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLK 93 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~--------------~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~ 93 (376)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+..... ...+|+++++.++|+||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 357999999999999999999875432 3589998865422 234699999999999999999
Q ss_pred eeeeecCCCCceeEEEEeecccc-hHHHHHHhhhh--------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCC
Q 017139 94 HCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSS--------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKP 164 (376)
Q Consensus 94 ~~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~--------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp 164 (376)
+++ ......++||||+.+ +|.+.+..... ....+++..+..++.|++.||+|||+ +|++|+||||
T Consensus 84 ~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp 157 (295)
T cd05097 84 GVC-----VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNFVHRDLAT 157 (295)
T ss_pred EEE-----cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCeeccccCh
Confidence 988 344458899999985 66666643211 11246888999999999999999999 7999999999
Q ss_pred CCeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh--CCCCCCC
Q 017139 165 QNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPG 239 (376)
Q Consensus 165 ~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt--g~~pf~~ 239 (376)
+||+++. ++.+||+|||++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||..
T Consensus 158 ~Nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 158 RNCLVGN-HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hhEEEcC-CCcEEecccccccccccCcceeccCcCcCceeecChhhhccC-CcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999995 77899999999876533221 1122336689999998654 48999999999999999998 6788887
Q ss_pred CChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 240 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+..+....+.+....... ......+...++.+.+|+.+||+.||++|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 236 LSDEQVIENTGEFFRNQGR---------------------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred cChHHHHHHHHHhhhhccc---------------------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 7665555443331100000 0000012346789999999999999999999999863
No 329
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.2e-38 Score=284.49 Aligned_cols=246 Identities=25% Similarity=0.331 Sum_probs=196.7
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
...++|++.+.||+|+||.||+|.+. +++.+|+|.+..... ...+|+.+++.++|+||+++++++ .....+
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPI 76 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCce
Confidence 34578999999999999999999975 457899998875432 345799999999999999999887 344458
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++||||+++ +|.+.+... .+..+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.++|+|||++..
T Consensus 77 ~~v~e~~~~~~L~~~i~~~--~~~~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~-~~~~~l~d~g~~~~ 152 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSG--EGKKLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGE-NLVCKIADFGLARL 152 (261)
T ss_pred EEEEeccCCCCHHHHHhcc--ccCCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcC-CCCEEECcccccee
Confidence 999999985 676666542 23568999999999999999999999 79999999999999996 78899999999876
Q ss_pred cccCCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 187 LVKGEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 187 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
...... .....++..|+|||.+.+. .++.++|+||+||++|+|++ |+.||.+.+....+..+......
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (261)
T cd05034 153 IEDDEYTAREGAKFPIKWTAPEAANYG-RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM-------- 223 (261)
T ss_pred ccchhhhhhhccCCCccccCHHHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--------
Confidence 543211 1122335679999998754 48999999999999999998 99999887766666554332110
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
..+...+.++.+++.+||+.||++||++++++
T Consensus 224 --------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 255 (261)
T cd05034 224 --------------------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQ 255 (261)
T ss_pred --------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 11234578999999999999999999999876
No 330
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=9.2e-39 Score=300.89 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=195.3
Q ss_pred cccceEeeeeeccCCceEEEEEEEc-----CCCcEEEEEEeccccc-----chHHHHHHHHhCC-CCCeeecceeeeecC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDRR-----YKNRELQLMRLMD-HPNVISLKHCFFSTT 100 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~ 100 (376)
..++|.+.+.||+|+||.||+|++. .+++.||+|++..... ...+|+.++.++. ||||+++++++.
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~--- 111 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT--- 111 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc---
Confidence 3467899999999999999999864 3456899999965422 2346999999997 999999999883
Q ss_pred CCCceeEEEEeeccc-chHHHHHHhhhh----------------------------------------------------
Q 017139 101 SKDELFLNLVMEYVP-ETMYRVLKHYSS---------------------------------------------------- 127 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~-g~l~~~l~~~~~---------------------------------------------------- 127 (376)
....+++|||||. |+|.+.+.....
T Consensus 112 --~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 112 --KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred --cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 3345899999999 477777754211
Q ss_pred ------------------------------------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCC
Q 017139 128 ------------------------------------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQ 165 (376)
Q Consensus 128 ------------------------------------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~ 165 (376)
....+++..++.++.|++.||+|||+ ++++||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrdlkp~ 268 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCVHRDLAAR 268 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcCcccCCcc
Confidence 11246777889999999999999999 79999999999
Q ss_pred CeeecCCCCcEEEEecCCccccccCC---CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCC
Q 017139 166 NLLVDPLTHQVKLCDFGSAKVLVKGE---ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGEN 241 (376)
Q Consensus 166 Nill~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~ 241 (376)
|||++. ++.+||+|||+++...... ......++..|+|||.+.+. .++.++|+|||||++|+|++ |..||....
T Consensus 269 NiLl~~-~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 269 NVLICE-GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN-LYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred eEEEeC-CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC-CCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999996 7889999999987643222 12234567889999998654 48999999999999999998 899998765
Q ss_pred hHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 242 AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..+.....+..... ...+..++.++.+++.+||..||.+||++.+++..
T Consensus 347 ~~~~~~~~~~~~~~---------------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 347 MNEQFYNAIKRGYR---------------------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred chHHHHHHHHcCCC---------------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 55544433321000 01233568899999999999999999999999754
No 331
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.5e-39 Score=289.37 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=193.3
Q ss_pred cceEeeeeeccCCceEEEEEEEc-----CCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCL-----ETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.+|.+.+.||+|+||.||+|.+. .++..+|+|.+.... ....+|+++++.++|+||+++++++ .+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC-----TEG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE-----ecC
Confidence 57899999999999999999753 346689999876432 2345789999999999999999887 334
Q ss_pred eeEEEEeecccc-hHHHHHHhhhh-----------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSS-----------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL 172 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~-----------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~ 172 (376)
..++++|||+++ +|.+.+..... ....+++..+..++.|++.||+|||+ +|++|+||||+||+++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp~nil~~~- 157 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLATRNCLVGQ- 157 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeecccccHhhEEEcC-
Confidence 458899999985 77666654321 11358899999999999999999999 79999999999999996
Q ss_pred CCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 017139 173 THQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 248 (376)
Q Consensus 173 ~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~ 248 (376)
++.+||+|||++........ .....+++.|+|||.+.+.. ++.++|+|||||++|+|++ |.+||......+....
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC 236 (280)
T ss_pred CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHH
Confidence 78899999999875433221 12233467899999987654 8999999999999999998 9999987766655544
Q ss_pred HHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 249 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
+..... ...+..+++.+.+++.+||+.||.+||++++++.
T Consensus 237 ~~~~~~----------------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 237 ITQGRE----------------------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHcCcc----------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 332100 0122356889999999999999999999999863
No 332
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-41 Score=296.93 Aligned_cols=266 Identities=24% Similarity=0.396 Sum_probs=210.0
Q ss_pred CCCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----------cchHHHHHHHHhCCCCCeeecce
Q 017139 26 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----------RYKNRELQLMRLMDHPNVISLKH 94 (376)
Q Consensus 26 ~~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----------~~~~~e~~~l~~l~h~~Iv~~~~ 94 (376)
+.-+|...++|-++..||+|||+.||+|.+....+.||+|+-.... +..-+|..+-+.|+||.||++++
T Consensus 455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 3457888999999999999999999999999999999999753221 12237999999999999999999
Q ss_pred eeeecCCCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-CCceeccCCCCCeeecCC
Q 017139 95 CFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV-PGVCHRDVKPQNLLVDPL 172 (376)
Q Consensus 95 ~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~~ivH~dlkp~Nill~~~ 172 (376)
+|.. +...+|-|+|||+| +|..+|+. +..+++.+++.|+.||+.||.||.+. ..|+|-||||.|||+-..
T Consensus 535 yfsl----DtdsFCTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G 606 (775)
T KOG1151|consen 535 YFSL----DTDSFCTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG 606 (775)
T ss_pred eeee----ccccceeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC
Confidence 9853 33348899999998 55555554 67799999999999999999999973 359999999999999532
Q ss_pred --CCcEEEEecCCccccccCCCc--------ceeeccccccChhhhhC---CCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 017139 173 --THQVKLCDFGSAKVLVKGEAN--------ISYICSRYYRAPELIFG---ATEYTTSIDIWSAGCVLAELLLGQPLFPG 239 (376)
Q Consensus 173 --~~~~kl~Dfg~~~~~~~~~~~--------~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~lltg~~pf~~ 239 (376)
.|.+||+|||+++.+..+... ....||.||++||.+.- .+.++.++||||+|||+|..+.|+.||..
T Consensus 607 tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 607 TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 357999999999988654332 34578999999998732 34578999999999999999999999976
Q ss_pred CChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCc
Q 017139 240 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 319 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~ 319 (376)
+.....+.+--.++. ..+..||. .+.+++++++||++||++--.+|+.+.++..|||
T Consensus 687 nqsQQdILqeNTIlk-------------AtEVqFP~----------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpy 743 (775)
T KOG1151|consen 687 NQSQQDILQENTILK-------------ATEVQFPP----------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPY 743 (775)
T ss_pred chhHHHHHhhhchhc-------------ceeccCCC----------CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcc
Confidence 654433322111111 12222221 1358999999999999999999999999999999
Q ss_pred ccc
Q 017139 320 FDE 322 (376)
Q Consensus 320 ~~~ 322 (376)
|.-
T Consensus 744 llP 746 (775)
T KOG1151|consen 744 LLP 746 (775)
T ss_pred ccc
Confidence 964
No 333
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.2e-39 Score=286.97 Aligned_cols=228 Identities=26% Similarity=0.340 Sum_probs=181.3
Q ss_pred CCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecccc-hHHHHHH
Q 017139 45 GSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLK 123 (376)
Q Consensus 45 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~ 123 (376)
|.+|.||+|++..+++.||+|.+...... .+|...+....||||+++++++ .+...++++|||++| +|.+.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~-~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY-SRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh-hhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHHHHHH
Confidence 88999999999999999999999765433 3455555566799999999988 444568999999995 6666665
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCcceeecccccc
Q 017139 124 HYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 203 (376)
Q Consensus 124 ~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~ 203 (376)
. ...+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++++|||.+...... .....++..|+
T Consensus 78 ~----~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~-~~~~~l~df~~~~~~~~~--~~~~~~~~~y~ 149 (237)
T cd05576 78 K----FLNIPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDD-RGHIQLTYFSRWSEVEDS--CDGEAVENMYC 149 (237)
T ss_pred H----hcCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcC-CCCEEEecccchhccccc--cccCCcCcccc
Confidence 4 2458999999999999999999999 79999999999999996 778999999987654332 12334567799
Q ss_pred ChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCccc
Q 017139 204 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHK 283 (376)
Q Consensus 204 aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (376)
|||.+.+. .++.++|+||+||++|+|++|..||...... +.. .. ..
T Consensus 150 aPE~~~~~-~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~~----------------~~------------~~ 195 (237)
T cd05576 150 APEVGGIS-EETEACDWWSLGAILFELLTGKTLVECHPSG-----INT----------------HT------------TL 195 (237)
T ss_pred CCcccCCC-CCCchhhHHHHHHHHHHHHHCcchhhcCchh-----ccc----------------cc------------cc
Confidence 99988554 4789999999999999999999887533210 000 00 00
Q ss_pred ccccCCChhHHHHHHhhcCCCCCCCCCH-----HHHhCCCcc
Q 017139 284 VFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFF 320 (376)
Q Consensus 284 ~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~~ 320 (376)
.++..+++.+.++|.+||+.||++|+++ +++++||||
T Consensus 196 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 196 NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 1334578899999999999999999986 999999997
No 334
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.3e-38 Score=284.13 Aligned_cols=244 Identities=24% Similarity=0.319 Sum_probs=193.5
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|++.++||+|+||.||+|... +++.+|+|.+..... ...+|+.+++.++|+||+++++++. + ..+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-----Q-EPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-----c-CCcEE
Confidence 467999999999999999999854 578899999875443 3356999999999999999988752 1 23789
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||+.+ +|.+.+... .+..+++..+..++.|++.||+|||+ .|++|+||||+||+++. ++.++|+|||++....
T Consensus 78 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 78 ITEYMENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSE-TLCCKIADFGLARLIE 153 (260)
T ss_pred EEEcCCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcC-CCCEEEccCcceeecC
Confidence 9999985 676666432 24568999999999999999999999 79999999999999996 7789999999987654
Q ss_pred cCCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 189 KGEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 189 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... .....++..|+|||.+.+. .++.++|+||||+++|++++ |..||.+.+..+....+......
T Consensus 154 ~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------- 222 (260)
T cd05067 154 DNEYTAREGAKFPIKWTAPEAINYG-TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---------- 222 (260)
T ss_pred CCCcccccCCcccccccCHHHhccC-CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC----------
Confidence 2221 1123346689999998654 48899999999999999999 99999887765554443221110
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+...+.++.+++.+||..||++|||++++++
T Consensus 223 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 223 ------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 022346889999999999999999999998863
No 335
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-38 Score=287.43 Aligned_cols=245 Identities=22% Similarity=0.308 Sum_probs=191.5
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCc----EEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
...+|++.+.||+|+||+||+|.+..+++ .||+|.+.... ....+|..+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---- 80 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC----
Confidence 34679999999999999999999877776 48999885432 223468889999999999999988732
Q ss_pred CceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
...++++||++ |+|.+.+.. ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.+||+||
T Consensus 81 --~~~~l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~-~~~~kL~df 153 (279)
T cd05109 81 --STVQLVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKS-PNHVKITDF 153 (279)
T ss_pred --CCcEEEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcC-CCcEEECCC
Confidence 12668999998 577666654 23568999999999999999999999 79999999999999985 778999999
Q ss_pred CCccccccCCCcc---eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 182 GSAKVLVKGEANI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 182 g~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
|+++......... ...++..|+|||.+.+. .++.++|||||||++|+|++ |..||.......... .+.....++
T Consensus 154 G~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~ 231 (279)
T cd05109 154 GLARLLDIDETEYHADGGKVPIKWMALESILHR-RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD-LLEKGERLP 231 (279)
T ss_pred CceeecccccceeecCCCccchhhCCHHHhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHCCCcCC
Confidence 9998664332221 12335679999998655 48999999999999999998 999997765544333 222111100
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+...+.++.+++.+||..||++||++.+++.
T Consensus 232 ---------------------------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 232 ---------------------------QPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ---------------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 12346889999999999999999999999983
No 336
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-38 Score=291.42 Aligned_cols=250 Identities=24% Similarity=0.350 Sum_probs=195.0
Q ss_pred cccceEeeeeeccCCceEEEEEEEc-------CCCcEEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeee
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCL-------ETGETVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFS 98 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~-------~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~ 98 (376)
..++|.+.+.||+|+||.||+|++. .++..+|+|.+.... ....+|+.+++.+ +||||+++++++
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-- 90 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-- 90 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE--
Confidence 4578999999999999999999753 234579999886432 2345789999999 899999999988
Q ss_pred cCCCCceeEEEEeecccc-hHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCC
Q 017139 99 TTSKDELFLNLVMEYVPE-TMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQ 165 (376)
Q Consensus 99 ~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~ 165 (376)
.....+|++|||+++ +|.+.+..... ....++...+..++.|++.||.|||+ +|++||||||+
T Consensus 91 ---~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~ 166 (304)
T cd05101 91 ---TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAAR 166 (304)
T ss_pred ---ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCeeecccccc
Confidence 344558899999985 77777765321 12457888899999999999999999 79999999999
Q ss_pred CeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCC
Q 017139 166 NLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGEN 241 (376)
Q Consensus 166 Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~ 241 (376)
||+++. ++.+||+|||+++....... .....+++.|+|||++.+. .++.++||||||+++|+|++ |..||.+..
T Consensus 167 Nili~~-~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 167 NVLVTE-NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred eEEEcC-CCcEEECCCccceecccccccccccCCCCCceeeCchhhccC-CCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 999986 78899999999986643221 1123346779999998664 48999999999999999998 889998776
Q ss_pred hHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 242 AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..+....+.... . ...+...+.++.+++.+||..+|++|||+.++++.
T Consensus 245 ~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 245 VEELFKLLKEGH-R---------------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHHHcCC-c---------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 655444332210 0 00123568899999999999999999999998754
No 337
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-41 Score=282.90 Aligned_cols=264 Identities=25% Similarity=0.341 Sum_probs=207.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccc-----hHHHHH-HHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-----KNRELQ-LMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~e~~-~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++.+-+..||.|+||+|++..++.+|+..|||.+...... +..|.+ +++.-+.||||++++..+.+++ .
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd-----c 138 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD-----C 138 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc-----e
Confidence 4444566899999999999999999999999999755432 223444 3455579999999999876554 7
Q ss_pred EEEeecccchHHHHHHh-hhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPETMYRVLKH-YSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~-~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+|.||.|+-++..+.+. +.-....++|..+-.|....+.||.||.+..+|+|||+||+|||++. .|.+||||||.+..
T Consensus 139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr-~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR-HGDVKLCDFGICGQ 217 (361)
T ss_pred eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec-CCCEeeecccchHh
Confidence 89999999877655543 33345679999999999999999999997558999999999999997 88899999999988
Q ss_pred cccCCCcceeeccccccChhhhhCCCC-CCccchhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHHHhhc
Q 017139 187 LVKGEANISYICSRYYRAPELIFGATE-YTTSIDIWSAGCVLAELLLGQPLFPGENA-VDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 187 ~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
..+.-..+...|-..|||||.+..... |+.+||+||||++|||++||.+|+.+-+. .+++.++.. |.|+.-....
T Consensus 218 Lv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l~~~~- 294 (361)
T KOG1006|consen 218 LVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPILLFDK- 294 (361)
T ss_pred HHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCeecCcc-
Confidence 877777777788889999999965444 89999999999999999999999977543 233333322 2222110000
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
---.++..+..+|..||.+|-+.||.-.+++.+||++.....
T Consensus 295 --------------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 295 --------------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred --------------------cccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhc
Confidence 001378899999999999999999999999999999876443
No 338
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.2e-38 Score=284.07 Aligned_cols=234 Identities=25% Similarity=0.335 Sum_probs=184.2
Q ss_pred eeccCCceEEEEEEE--cCCCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 41 VVGTGSFGIVFQAKC--LETGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
.||+|+||.||+|.. ..++..+|+|++..... ....|+.+++.++||||+++++++ .++ ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~-~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC-----EAE-SWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCC-CcEEEEe
Confidence 689999999999964 45678999998854322 234688999999999999998876 222 3679999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCC
Q 017139 113 YVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE 191 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~ 191 (376)
|+++ +|.+.+.. ...+++..+..++.|++.||+|||+ +|++||||||.||+++. ++.+||+|||++.......
T Consensus 76 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~-~~~~kl~Dfg~~~~~~~~~ 149 (257)
T cd05116 76 LAELGPLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVT-QHYAKISDFGLSKALGADE 149 (257)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcC-CCeEEECCCccccccCCCC
Confidence 9995 56665543 3568999999999999999999999 79999999999999996 7789999999987664332
Q ss_pred Cc----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 192 AN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 192 ~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.. ....++..|+|||.+... .++.++|+|||||++|+|++ |..||.+.+..+....+.+.. .
T Consensus 150 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~-~----------- 216 (257)
T cd05116 150 NYYKAKTHGKWPVKWYAPECMNYY-KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE-R----------- 216 (257)
T ss_pred CeeeecCCCCCCccccCHhHhccC-CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-C-----------
Confidence 21 112235689999988644 48899999999999999998 999998876655444332210 0
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
...+..+++++.++|.+||+.||++||+++++.
T Consensus 217 ----------------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~ 249 (257)
T cd05116 217 ----------------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVE 249 (257)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHH
Confidence 012345789999999999999999999999875
No 339
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.7e-38 Score=284.86 Aligned_cols=249 Identities=21% Similarity=0.376 Sum_probs=197.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcC-CCcEEEEEEecccc--------------cchHHHHHHHH-hCCCCCeeecceeeee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDR--------------RYKNRELQLMR-LMDHPNVISLKHCFFS 98 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~--------------~~~~~e~~~l~-~l~h~~Iv~~~~~~~~ 98 (376)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+.... .....|..++. .++||||+++++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-- 78 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF-- 78 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE--
Confidence 48899999999999999999987 67899999875321 01224666665 47999999999988
Q ss_pred cCCCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEE
Q 017139 99 TTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVK 177 (376)
Q Consensus 99 ~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~k 177 (376)
.++...+++|||+++ +|.+.+.........+++..++.++.|++.+|.|||+..|++|+||+|+||+++. ++.++
T Consensus 79 ---~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~-~~~~~ 154 (269)
T cd08528 79 ---LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE-DDKVT 154 (269)
T ss_pred ---ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC-CCcEE
Confidence 455568999999985 6766665544456679999999999999999999995258999999999999996 77899
Q ss_pred EEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 178 LCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 178 l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
|+|||.+.............++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+.......+......+
T Consensus 155 l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~- 232 (269)
T cd08528 155 ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP- 232 (269)
T ss_pred EecccceeecccccccccccCcccCcChhhhcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc-
Confidence 99999998765544444566788999999997644 8999999999999999999999998776554444333211110
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
......++++.+++.+||+.||++||++.|+..+
T Consensus 233 --------------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 --------------------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred --------------------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0112467899999999999999999999998653
No 340
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1e-38 Score=286.50 Aligned_cols=241 Identities=24% Similarity=0.338 Sum_probs=185.8
Q ss_pred eeeccCCceEEEEEEEcCCCc--EEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETGE--TVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~--~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|++..++. .+++|.+.... ....+|++++..+ +||||+++++++ .....++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEE-----ecCCCceEEE
Confidence 368999999999999988776 46888776422 2334689999999 799999999988 4445589999
Q ss_pred eccc-chHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEE
Q 017139 112 EYVP-ETMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL 178 (376)
Q Consensus 112 e~~~-g~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl 178 (376)
||++ ++|.+.+..... ....+++..++.++.|++.||+|||+ +|++|+||||+||+++. ++.+||
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~-~~~~kl 153 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGE-NYVAKI 153 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcC-CCeEEE
Confidence 9998 577777765321 12358899999999999999999999 79999999999999996 788999
Q ss_pred EecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 179 CDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 179 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
+|||++..............+..|+|||++... .++.++|+|||||++|+|++ |..||.+.+..+....+....
T Consensus 154 ~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~---- 228 (270)
T cd05047 154 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---- 228 (270)
T ss_pred CCCCCccccchhhhccCCCCccccCChHHHccC-CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC----
Confidence 999998643221111122235679999998654 48999999999999999997 999998766554444332100
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.. ..+...+.++.+++.+||..||.+|||++++++
T Consensus 229 --------------~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 229 --------------RL----------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred --------------CC----------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 00 012346789999999999999999999999874
No 341
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-38 Score=289.31 Aligned_cols=248 Identities=25% Similarity=0.304 Sum_probs=194.5
Q ss_pred ccceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
.++|++.+.||+|+||.||+|.+.. ++..+|+|.+.... ....+|+.+++.++||||+++++++ .
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~-----~ 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVC-----A 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEE-----c
Confidence 4679999999999999999998753 57889999886542 2344689999999999999999987 4
Q ss_pred CceeEEEEeecccc-hHHHHHHhhh------------------hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCC
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYS------------------SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVK 163 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~------------------~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlk 163 (376)
.+..++++|||+++ +|.+.+.... .....+++..++.++.|++.||.|||+ +|++|||||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~i~H~dl~ 157 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RKFVHRDLA 157 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CCeeccccc
Confidence 44458899999995 7777775421 112347888999999999999999999 799999999
Q ss_pred CCCeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCC
Q 017139 164 PQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPG 239 (376)
Q Consensus 164 p~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~ 239 (376)
|+||+++. ++.++|+|||++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+
T Consensus 158 p~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 158 TRNCLVGE-NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN-RYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred HhheEecC-CCceEECccccceecccCccccccCCCccChhhcCHHHHhcC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999986 78899999999875432211 1122345679999998665 48999999999999999997 8889987
Q ss_pred CChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 240 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
....+....+..... ...+...+.++.+|+.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 236 MAHEEVIYYVRDGNV----------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCHHHHHHHHhcCCC----------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 776655543322100 0012346889999999999999999999999863
No 342
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-38 Score=285.87 Aligned_cols=245 Identities=25% Similarity=0.345 Sum_probs=192.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCc---EEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
..+|++.+.||+|+||.||+|.+..++. .+|+|.+.... .....|+.+++.++||||+++++++ ..+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKS 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 3579999999999999999999875543 69999886432 2345688999999999999999987 344
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..+|+||||+++ +|.+.+.. ....+++..+..++.|++.||.+||+ +|++|+||||+||+++. ++.++|+|||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~-~~~~~l~dfg~ 152 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNS-NLVCKVSDFGL 152 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECC-CCeEEeCCCCc
Confidence 458899999985 66655543 23468999999999999999999999 79999999999999986 77899999999
Q ss_pred ccccccCCCcc----eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 184 AKVLVKGEANI----SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 184 ~~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+.......... ...++..|+|||.+.+. .++.++|+|||||++|++++ |..||...+..+....+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~---- 227 (267)
T cd05066 153 SRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR---- 227 (267)
T ss_pred ccccccccceeeecCCCccceeecCHhHhccC-ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc----
Confidence 98764432211 11224579999999654 48999999999999999886 9999987766554444332110
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+ .+..+++.+.+++.+||+.+|.+||++.++++
T Consensus 228 --------------~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 228 --------------LP----------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred --------------CC----------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 00 12346889999999999999999999999863
No 343
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-38 Score=285.10 Aligned_cols=244 Identities=22% Similarity=0.312 Sum_probs=192.7
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCc---EEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
++|+..+.||+|+||.||+|.+..++. .+|+|.+.... .....|+.+++.++||||+++.+++ .+..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV-----TKFK 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----ccCC
Confidence 478999999999999999999876654 69999886442 2234688999999999999999988 4444
Q ss_pred eEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..++||||+++ +|...+.. ....+++..+..++.|++.||+|||+ .|++|+||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~-~~~~kl~dfg~~ 154 (268)
T cd05063 80 PAMIITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNS-NLECKVSDFGLS 154 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcC-CCcEEECCCccc
Confidence 58899999996 55555543 23568999999999999999999999 79999999999999996 778999999998
Q ss_pred cccccCCCcc----eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 185 KVLVKGEANI----SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 185 ~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
.......... ....+..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+......+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~--- 230 (268)
T cd05063 155 RVLEDDPEGTYTTSGGKIPIRWTAPEAIAYR-KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP--- 230 (268)
T ss_pred eecccccccceeccCCCcCceecCHHHhhcC-CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC---
Confidence 7654332211 11124569999998654 47999999999999999997 999998777655554443211100
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+...+.++.+++.+||+.||++||++.++++
T Consensus 231 -------------------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 231 -------------------------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11246889999999999999999999999874
No 344
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.6e-39 Score=286.01 Aligned_cols=242 Identities=26% Similarity=0.382 Sum_probs=188.8
Q ss_pred EeeeeeccCCceEEEEEEEc----CCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 37 MAERVVGTGSFGIVFQAKCL----ETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~----~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.+.+.||.|+||.||+|... ..+..|+||.+.... ....+|++.++.++||||+++++++.... .+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-----~~ 76 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-----PL 76 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-----SE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-----cc
Confidence 46789999999999999987 346789999995432 23446899999999999999999986322 28
Q ss_pred EEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++|||||+ |+|.+.+... ....+++..+..|+.||+.||.|||+ ++++|++|+++||+++. ++.+||+|||++..
T Consensus 77 ~lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~-~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDS-NGQVKLSDFGLSRP 152 (259)
T ss_dssp EEEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEET-TTEEEEESTTTGEE
T ss_pred ccccccccccccccccccc--cccccccccccccccccccccccccc-ccccccccccccccccc-cccccccccccccc
Confidence 89999998 5788888763 24678999999999999999999999 79999999999999996 78999999999987
Q ss_pred cccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 187 LVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 187 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
...... .....+...|+|||.+.... ++.++||||||+++||+++ |..||...+..+....+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-------- 223 (259)
T PF07714_consen 153 ISEKSKYKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-------- 223 (259)
T ss_dssp TTTSSSEEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE--------
T ss_pred ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc--------
Confidence 632222 12334577899999997655 8999999999999999999 7899988877776665533110
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+..++..+.++|.+||..||++|||+.++++
T Consensus 224 --------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 --------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp --------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred --------------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1123457899999999999999999999999864
No 345
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.1e-38 Score=289.75 Aligned_cols=254 Identities=18% Similarity=0.211 Sum_probs=184.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCC---CcEEEEEEecccccchHH---------------HHHHHHhCCCCCeeeccee
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLET---GETVAIKKVLQDRRYKNR---------------ELQLMRLMDHPNVISLKHC 95 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~~~~~~---------------e~~~l~~l~h~~Iv~~~~~ 95 (376)
++|.+.+.||+|+||+||+|.+..+ +..+|+|+.......... +...+..+.|++|++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999998877 667788865332222111 2223445689999999887
Q ss_pred eeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCc
Q 017139 96 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ 175 (376)
Q Consensus 96 ~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~ 175 (376)
..... ....+.+++++++..++...+... ...++..++.++.|++.||+|||+ ++|+||||||+|||++. ++.
T Consensus 92 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nill~~-~~~ 164 (294)
T PHA02882 92 GSFKR-CRMYYRFILLEKLVENTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIMVDG-NNR 164 (294)
T ss_pred eeEec-CCceEEEEEEehhccCHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCc
Confidence 64332 223456789998887766555432 335788899999999999999999 79999999999999986 778
Q ss_pred EEEEecCCccccccCC--------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 017139 176 VKLCDFGSAKVLVKGE--------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLV 247 (376)
Q Consensus 176 ~kl~Dfg~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~ 247 (376)
++|+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~-~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA-CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC-CCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 9999999987653221 11234689999999998765 48999999999999999999999998764322222
Q ss_pred HHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 248 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+. +.+...... .......++++.++++.|+..+|++||+.+++++
T Consensus 244 ~~~~~------~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 244 HAAKC------DFIKRLHEG---------------KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHhHH------HHHHHhhhh---------------hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 11110 000000000 0011245789999999999999999999999863
No 346
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.3e-38 Score=282.09 Aligned_cols=239 Identities=24% Similarity=0.341 Sum_probs=190.0
Q ss_pred eeeccCCceEEEEEEEcC-CCc--EEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLE-TGE--TVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~-~~~--~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|++|.||+|.+.. +++ .+|+|.+..... ...+|+.++++++||||+++++.+. + ..+++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 468999999999999865 333 699999876544 3446999999999999999999873 3 5588999
Q ss_pred eccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||++ ++|.+.+..... ..+++..++.++.|++.||+|||+ +|++|+||+|+||+++. ++.+||+|||++......
T Consensus 75 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~-~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLAS-DDKVKIGDFGLMRALPQN 150 (257)
T ss_pred EecCCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEec-CCEEEecccccccccccc
Confidence 9997 577776665321 568999999999999999999999 79999999999999996 788999999998876442
Q ss_pred CCc----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 191 EAN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 191 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
... ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+......
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------- 219 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTR-TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGER---------- 219 (257)
T ss_pred ccceecccCCCCCceecCHHHhccc-CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCc----------
Confidence 211 123456789999998654 48999999999999999998 99999877766655544331000
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...+..+.+++.+||+.+|++||++.++++
T Consensus 220 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 220 -----------------LERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred -----------------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0012346889999999999999999999999874
No 347
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.9e-38 Score=284.57 Aligned_cols=244 Identities=23% Similarity=0.336 Sum_probs=192.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCc---EEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
.+|.+.+.||+|+||.||+|.+..+++ .||+|.+.... .....|+.+++.++||||+++++++ .++.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCC
Confidence 469999999999999999999887765 59999886532 2334689999999999999999987 4445
Q ss_pred eEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+++||||+++ +|.+.+.. ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~-~~~~kl~dfg~~ 153 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNS-NLVCKVSDFGLS 153 (269)
T ss_pred ceEEEEecCCCCcHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcC-CCcEEECCCccc
Confidence 58899999986 55555543 23568999999999999999999999 79999999999999986 778999999998
Q ss_pred cccccCCCcce---ee---ccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 185 KVLVKGEANIS---YI---CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 185 ~~~~~~~~~~~---~~---~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
........... .. .+..|+|||.+.+. .++.++|+||+||++|++++ |..||...+..+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~--- 229 (269)
T cd05065 154 RFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR--- 229 (269)
T ss_pred cccccCccccccccccCCCcceeecCHhHhccC-cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc---
Confidence 76543222111 11 13469999998654 48999999999999999886 9999987766554444322100
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+ .+..++..+.+++.+||..+|++||++++++.
T Consensus 230 ---------------~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 230 ---------------LP----------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred ---------------CC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 12346789999999999999999999999874
No 348
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.3e-38 Score=284.94 Aligned_cols=249 Identities=22% Similarity=0.280 Sum_probs=194.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
.+|.+.+.||.|+||.||+|+.+. +.+.+++|.+..... ...+|+.+++.++|+||+++++++ .+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC-----RE 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE-----CC
Confidence 679999999999999999999754 346799998855432 245799999999999999999987 44
Q ss_pred ceeEEEEeeccc-chHHHHHHhhhhc-----CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEE
Q 017139 104 ELFLNLVMEYVP-ETMYRVLKHYSSM-----NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVK 177 (376)
Q Consensus 104 ~~~~~lv~e~~~-g~l~~~l~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~k 177 (376)
....|+||||++ ++|.+.+...... ...+++..+..++.|++.||+|||+ +||+|+||||+||+++. ++.++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili~~-~~~~~ 157 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLVSS-QREVK 157 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEEeC-CCcEE
Confidence 556899999998 4777776543211 1268999999999999999999999 79999999999999996 77899
Q ss_pred EEecCCccccccCC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 017139 178 LCDFGSAKVLVKGE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG 254 (376)
Q Consensus 178 l~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 254 (376)
++|||++....... ......++..|+|||.+.+.. ++.++|+||||+++|+|++ |..||...........+....
T Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~- 235 (275)
T cd05046 158 VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK- 235 (275)
T ss_pred EcccccccccCcccccccCCceeEEeecChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC-
Confidence 99999986543221 122334567799999986544 7899999999999999998 889997765544443332110
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
+....+..++..+.+++.+||..||++|||+.+++++
T Consensus 236 --------------------------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 236 --------------------------LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred --------------------------cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0001223578899999999999999999999998864
No 349
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.5e-39 Score=319.65 Aligned_cols=256 Identities=31% Similarity=0.460 Sum_probs=192.6
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeee----------
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFS---------- 98 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~---------- 98 (376)
.+|+..+.||+||||.||+|+++-+|+.||||++.... ....+|+.++.+|+|||||+++..+..
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 56888999999999999999999999999999996552 224479999999999999998744310
Q ss_pred --------------------------------------------cC---------C------------------------
Q 017139 99 --------------------------------------------TT---------S------------------------ 101 (376)
Q Consensus 99 --------------------------------------------~~---------~------------------------ 101 (376)
.. +
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence 00 0
Q ss_pred --------------------C-------CceeEEEEeecccchHHHHHHhhhhcCCCC-CHHHHHHHHHHHHHHHHHhHc
Q 017139 102 --------------------K-------DELFLNLVMEYVPETMYRVLKHYSSMNQRM-PLIYVKLYTYQIFRGLAYIHT 153 (376)
Q Consensus 102 --------------------~-------~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l-~~~~~~~i~~qil~aL~~LH~ 153 (376)
. ...++||-||||+.+++..+... +... .....|+++.||+.||.|+|+
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~---N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR---NHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh---cccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 00567999999998766665542 2222 467789999999999999999
Q ss_pred CCCceeccCCCCCeeecCCCCcEEEEecCCccccc-------------------cCCCcceeeccccccChhhhhCCC--
Q 017139 154 VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV-------------------KGEANISYICSRYYRAPELIFGAT-- 212 (376)
Q Consensus 154 ~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~-------------------~~~~~~~~~~t~~y~aPE~~~~~~-- 212 (376)
.|||||||||.|||+++ ++.|||+|||+|.... +....++.+||..|+|||++.+..
T Consensus 716 -~giIHRDLKP~NIFLd~-~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 716 -QGIIHRDLKPRNIFLDS-RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred -CceeeccCCcceeEEcC-CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 69999999999999996 7789999999997621 112345678999999999997655
Q ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChh
Q 017139 213 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPE 292 (376)
Q Consensus 213 ~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
.|+.++|+||||+|++||+. ||... .+.. .++..+.... +|.. .-|...--+.
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa-~iL~~LR~g~---------------iP~~------~~f~~~~~~~ 846 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTS--MERA-SILTNLRKGS---------------IPEP------ADFFDPEHPE 846 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCch--HHHH-HHHHhcccCC---------------CCCC------cccccccchH
Confidence 59999999999999999994 45422 2222 2222211111 1110 1122223456
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 293 AIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 293 ~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
-..+|..||+.||++||||.|+|++.||-
T Consensus 847 e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 847 EASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 67999999999999999999999999997
No 350
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-38 Score=293.50 Aligned_cols=249 Identities=23% Similarity=0.339 Sum_probs=193.4
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC-------CcEEEEEEecccc-----cchHHHHHHHHhC-CCCCeeecceeeeec
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET-------GETVAIKKVLQDR-----RYKNRELQLMRLM-DHPNVISLKHCFFST 99 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~-------~~~~aiK~~~~~~-----~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~ 99 (376)
..+|++++.||+|+||.||+|.+... +..+|+|.+.... ....+|+++++.+ +||||+++++++
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--- 87 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 87 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE---
Confidence 35799999999999999999986432 2368999876432 2344689999999 799999999988
Q ss_pred CCCCceeEEEEeecccc-hHHHHHHhhhh------------cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 100 TSKDELFLNLVMEYVPE-TMYRVLKHYSS------------MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 100 ~~~~~~~~~lv~e~~~g-~l~~~l~~~~~------------~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
.....++++|||+++ +|.+.+..... ....++...+..++.|++.||.|||+ +|++||||||+|
T Consensus 88 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~N 164 (334)
T cd05100 88 --TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCIHRDLAARN 164 (334)
T ss_pred --ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccce
Confidence 344458899999985 77777664321 23457888899999999999999999 799999999999
Q ss_pred eeecCCCCcEEEEecCCccccccCCCc---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 017139 167 LLVDPLTHQVKLCDFGSAKVLVKGEAN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENA 242 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~ 242 (376)
|+++. ++.+||+|||+++........ ....++..|+|||++.+. .++.++|+|||||++|+|++ |..||.+.+.
T Consensus 165 ill~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 165 VLVTE-DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EEEcC-CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccC-CcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99996 778999999998765432211 122234679999998664 48999999999999999998 8999988766
Q ss_pred HHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 243 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
.+....+..... ...+...+.++.+++.+||+.+|.+|||+.+++++
T Consensus 243 ~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 243 EELFKLLKEGHR----------------------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHHcCCC----------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 554443322100 01223568899999999999999999999999876
No 351
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.1e-38 Score=281.26 Aligned_cols=236 Identities=27% Similarity=0.383 Sum_probs=185.6
Q ss_pred eeeccCCceEEEEEEEcCCC---cEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLETG---ETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~---~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|....++ ..+|+|.+..... ...+|+.+++.++||||+++++++ ..+ .+++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~-~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-----KGE-PLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----cCC-ceEEEE
Confidence 47999999999999876554 7899999865543 234688999999999999999876 222 368999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+++ +|.+.+.. ...+++..+..++.|++.||+|||. .|++|+||||+||+++. ++.+||+|||+++.....
T Consensus 75 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~-~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 75 ELAPLGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVN-RHQAKISDFGMSRALGAG 148 (257)
T ss_pred EeCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcC-CCcEEeccccccceeecC
Confidence 99985 67666654 3478999999999999999999999 79999999999999996 788999999998866433
Q ss_pred CCcc----eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 191 EANI----SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 191 ~~~~----~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... ...++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+... ..
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~~---------- 216 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYG-KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-ER---------- 216 (257)
T ss_pred CcccccccCccccccccCHHHhcCC-CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-Cc----------
Confidence 2211 11124579999998654 48999999999999999998 99999877665444333221 00
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+..++..+.+++.+||..||++||++.++++
T Consensus 217 -----------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 217 -----------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred -----------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0122356889999999999999999999999863
No 352
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.9e-38 Score=285.07 Aligned_cols=250 Identities=20% Similarity=0.265 Sum_probs=194.7
Q ss_pred cccceEeeeeeccCCceEEEEEEEcC----CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLE----TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
..++|.+.+.||+|+||.||+|.+.. ++..+++|.+.... ....+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 45789999999999999999999876 35789999886442 2234688999999999999999976432
Q ss_pred CceeEEEEeeccc-chHHHHHHhhhhc----CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEE
Q 017139 103 DELFLNLVMEYVP-ETMYRVLKHYSSM----NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVK 177 (376)
Q Consensus 103 ~~~~~~lv~e~~~-g~l~~~l~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~k 177 (376)
....++++||++ ++|...+...... ...+++..+..++.|++.||+|||+ ++++|+||||+||+++. ++.+|
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~-~~~~k 157 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDE-ELQVK 157 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcC-CCcEE
Confidence 344789999998 5777766543222 1568999999999999999999999 79999999999999986 78899
Q ss_pred EEecCCccccccCCCc---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhc
Q 017139 178 LCDFGSAKVLVKGEAN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVL 253 (376)
Q Consensus 178 l~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~ 253 (376)
|+|||+++........ ....++..|+|||.+.+. .++.++|||||||++|++++ |..||...+..+....+....
T Consensus 158 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 236 (280)
T cd05043 158 ITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNK-EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY 236 (280)
T ss_pred ECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcC-CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC
Confidence 9999999765332211 122345679999998665 48999999999999999998 999998776654333222110
Q ss_pred CCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 254 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.. ..+..+++++.+++.+||..||++|||+.++++
T Consensus 237 ------------------~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 237 ------------------RL----------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred ------------------CC----------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 012246789999999999999999999999873
No 353
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.7e-38 Score=280.50 Aligned_cols=243 Identities=27% Similarity=0.396 Sum_probs=194.3
Q ss_pred eEeeeeeccCCceEEEEEEEcCCC----cEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETG----ETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~----~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
+++.+.||.|+||.||+|.+...+ ..+|+|.+..... ....|+.+++.++|+||+++++++. +...
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCe
Confidence 356789999999999999998766 8999999865432 3446899999999999999999883 3455
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+++|||+++ +|.+.+.... ...+++..+..++.|++.||.+||+ .|++|+||+|+||+++. ++.++|+|||++.
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~ 151 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGE-NLVVKISDFGLSR 151 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEcc-CCeEEEcccCCce
Confidence 8999999985 6666665421 1228999999999999999999999 79999999999999996 7789999999997
Q ss_pred ccccCCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 186 VLVKGEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 186 ~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
......... ...+++.|+|||.+.+ ..++.++|+||+||++|+|++ |.+||...+.......+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~-------- 222 (258)
T smart00219 152 DLYDDDYYKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR-------- 222 (258)
T ss_pred ecccccccccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC--------
Confidence 665442221 1235678999999854 458999999999999999998 8899988766655554433110
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...+.++.+++.+||..||++|||+.++++
T Consensus 223 --------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 223 --------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred --------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 0122346889999999999999999999999875
No 354
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.6e-38 Score=285.34 Aligned_cols=244 Identities=19% Similarity=0.290 Sum_probs=187.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCc----EEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
.++|++.+.||.|+||.||+|.+..+++ .+++|.+.... .....|+..++.++||||+++++++. +
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-----~ 80 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-----G 80 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-----C
Confidence 4679999999999999999999987776 47777764322 12234666778899999999998762 2
Q ss_pred ceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
. ..++++||++ |+|.+.+.. ....+++..+..++.||+.||.|||+ +|++|+||||+||+++. ++.+||+|||
T Consensus 81 ~-~~~~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~-~~~~kl~Dfg 154 (279)
T cd05111 81 A-SLQLVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKS-DSIVQIADFG 154 (279)
T ss_pred C-ccEEEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcC-CCcEEEcCCc
Confidence 2 2668999998 577766654 23568999999999999999999999 79999999999999996 7889999999
Q ss_pred CccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 183 SAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 183 ~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+++....... .....++..|+|||.+.+. .++.++|+|||||++|++++ |..||.+........ ++.....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~- 231 (279)
T cd05111 155 VADLLYPDDKKYFYSEHKTPIKWMALESILFG-RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPD-LLEKGERLA- 231 (279)
T ss_pred cceeccCCCcccccCCCCCcccccCHHHhccC-CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHCCCcCC-
Confidence 9976543322 1123456689999998654 48999999999999999998 999998776544322 222100000
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+...+.++.+++.+||..||++|||+.++++
T Consensus 232 --------------------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 232 --------------------------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred --------------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11235678999999999999999999999875
No 355
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.3e-38 Score=280.14 Aligned_cols=244 Identities=20% Similarity=0.315 Sum_probs=192.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.+|++.+.||.|+||.||+|.+. ++..+|+|.+.... ....+|+++++.++||||+++++++ ......++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceEEE
Confidence 46999999999999999999875 46789999886542 2345799999999999999999887 444558999
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+.+ +|.+.+.. ....+++..++.++.|++.||++||+ +|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus 78 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~~~~ 152 (256)
T cd05112 78 FEFMEHGCLSDYLRA---QRGKFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGE-NQVVKVSDFGMTRFVLD 152 (256)
T ss_pred EEcCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcC-CCeEEECCCcceeeccc
Confidence 999986 55444432 23458899999999999999999999 79999999999999985 77899999999875533
Q ss_pred CCCc--ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCc
Q 017139 190 GEAN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 266 (376)
Q Consensus 190 ~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (376)
.... ....++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...........+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~aPe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------------ 219 (256)
T cd05112 153 DQYTSSTGTKFPVKWSSPEVFSFS-KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR------------ 219 (256)
T ss_pred CcccccCCCccchhhcCHhHhccC-CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC------------
Confidence 2211 122345679999998654 48899999999999999998 9999987776555544322100
Q ss_pred CCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 267 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...+...+..+.+|+.+||+.+|++|||+.+++++
T Consensus 220 ----------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 220 ----------------LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 00122357899999999999999999999999753
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.5e-39 Score=286.95 Aligned_cols=236 Identities=19% Similarity=0.235 Sum_probs=180.9
Q ss_pred eeeccCCceEEEEEEEcCCCc-------EEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 40 RVVGTGSFGIVFQAKCLETGE-------TVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~-------~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+.||.|+||.||+|.+...+. .+++|.+..... ....|..+++.++||||+++++++.. ....+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 469999999999999866544 388887754332 23468889999999999999998843 33478
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC-------cEEEEe
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH-------QVKLCD 180 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~-------~~kl~D 180 (376)
+||||+++ +|...+... ...+++..+..++.||+.||+|||+ +||+||||||+||+++.++. .++++|
T Consensus 76 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred EEEecCCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCceEEecc
Confidence 99999986 565555432 3468999999999999999999999 79999999999999986333 279999
Q ss_pred cCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 181 FGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 181 fg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
||.+..... .....++..|+|||.+.+...++.++|+|||||++|+|++| ..||...+....... ...
T Consensus 152 ~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~------- 220 (258)
T cd05078 152 PGISITVLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YED------- 220 (258)
T ss_pred cccccccCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHc-------
Confidence 998865432 22345688899999997655578999999999999999998 466665544332221 110
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...++...+.++.+++.+||+.||++|||++++++.
T Consensus 221 ----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 221 ----------------------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ----------------------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 001223456789999999999999999999999853
No 357
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.5e-38 Score=287.87 Aligned_cols=254 Identities=20% Similarity=0.270 Sum_probs=190.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcC----------------CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeec
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLE----------------TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISL 92 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~----------------~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~ 92 (376)
++|++.+.||+|+||.||+|.+.. ++..+|+|.+.... ....+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 469999999999999999986532 34579999886542 234479999999999999999
Q ss_pred ceeeeecCCCCceeEEEEeecccc-hHHHHHHhhhhc-------CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCC
Q 017139 93 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSM-------NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKP 164 (376)
Q Consensus 93 ~~~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~-------~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp 164 (376)
++++. ....++++|||+++ +|.+.+...... ...+++..+..++.|++.||+|||+ +|++|+||||
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dlkp 158 (296)
T cd05095 85 LAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LNFVHRDLAT 158 (296)
T ss_pred EEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCeecccCCh
Confidence 99883 33448999999984 777766543211 2347788899999999999999999 7999999999
Q ss_pred CCeeecCCCCcEEEEecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh--CCCCCCC
Q 017139 165 QNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPG 239 (376)
Q Consensus 165 ~Nill~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt--g~~pf~~ 239 (376)
+||+++. ++.++|+|||++........ ......+..|++||...+. .++.++|+|||||++|+|++ |..||..
T Consensus 159 ~Nili~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 159 RNCLVGK-NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG-KFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred heEEEcC-CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcC-CccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 9999986 78899999999876533221 1122335679999988665 48999999999999999998 7789977
Q ss_pred CChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 240 ENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+..+........... .......+ .+...++.+.+|+.+||+.||++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~-----------~~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 237 LSDEQVIENTGEFFRD-----------QGRQVYLP----------KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred cChHHHHHHHHHHHhh-----------ccccccCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 6655444332211000 00000000 12346789999999999999999999999863
No 358
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.5e-38 Score=279.77 Aligned_cols=236 Identities=23% Similarity=0.294 Sum_probs=183.7
Q ss_pred eeccCCceEEEEEEEc--CCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeec
Q 017139 41 VVGTGSFGIVFQAKCL--ETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEY 113 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~ 113 (376)
.||+|+||.||+|.+. ..+..+|+|++..... ...+|+.+++.++||||+++++++ +. ..+++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~-----~~-~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC-----EA-EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----cC-CCeEEEEEe
Confidence 4899999999999765 3456799998865432 244789999999999999999876 22 237899999
Q ss_pred ccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC
Q 017139 114 VPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 192 (376)
Q Consensus 114 ~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~ 192 (376)
+++ +|.+.+.. ....+++..++.++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||++........
T Consensus 76 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 76 ASGGPLNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVN-QHYAKISDFGLSKALGADDS 150 (257)
T ss_pred CCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcC-CCcEEeccCCccccccCCcc
Confidence 985 66555543 23568999999999999999999999 79999999999999986 77899999999875533322
Q ss_pred c----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcC
Q 017139 193 N----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 267 (376)
Q Consensus 193 ~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
. ....++..|+|||.+... .++.++|+|||||++|++++ |..||.+....+....+... ..
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~------------ 216 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINFR-KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG-KR------------ 216 (257)
T ss_pred ceeccCCCCCCcccCCHHHHccC-CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CC------------
Confidence 1 111225679999998654 48999999999999999996 99999887765544333221 00
Q ss_pred CcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 268 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...++++.+++.+||..||++||+..++.+
T Consensus 217 ---------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 ---------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0123456899999999999999999999998853
No 359
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=296.48 Aligned_cols=261 Identities=26% Similarity=0.365 Sum_probs=191.9
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.+++|.-...||+|+||.||+|... +|..||||++.... .....|+.++.+++|||+|++++++..... ..
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~----~~ 147 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE----HR 147 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc----eE
Confidence 4477888889999999999999964 44899999886543 346789999999999999999999943221 47
Q ss_pred EEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCC--CceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 108 NLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP--GVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 108 ~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~--~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
+||+||++ |+|.+.+...... .++|..+.+|+.+++.||+|||+.. .|+||||||+|||+|. +...||+|||+|
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~-~~~aKlsDFGLa 224 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE-DFNAKLSDFGLA 224 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC-CCCEEccCccCc
Confidence 89999999 6877777653222 8899999999999999999999843 3999999999999995 899999999999
Q ss_pred ccccc-CCCccee-eccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHH-hcCCCCHH
Q 017139 185 KVLVK-GEANISY-ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN--AVDQLVEIIK-VLGTPTRE 259 (376)
Q Consensus 185 ~~~~~-~~~~~~~-~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~--~~~~~~~~~~-~~~~~~~~ 259 (376)
+.... ....... .||..|+|||++... ..+.++||||||+++.|++||+.+..... ....+..+.. .....
T Consensus 225 ~~~~~~~~~~~~~~~gt~gY~~PEy~~~g-~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~--- 300 (361)
T KOG1187|consen 225 KLGPEGDTSVSTTVMGTFGYLAPEYASTG-KLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG--- 300 (361)
T ss_pred ccCCccccceeeecCCCCccCChhhhccC-CcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc---
Confidence 76554 3332333 789999999999754 48999999999999999999998876532 1111222211 11110
Q ss_pred HHhhcCcCCcCccCCCCCCCCccccccc-CCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
...++.-|.+.. ..++. ..-..+..+..+|++.+|.+||+..+++
T Consensus 301 -------~~~eiiD~~l~~----~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 301 -------KLREIVDPRLKE----GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred -------chhheeCCCccC----CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 111111111110 00110 0112366777999999999999999874
No 360
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.7e-38 Score=284.33 Aligned_cols=260 Identities=25% Similarity=0.349 Sum_probs=189.5
Q ss_pred cceEeeeeeccCCceEEEEEEE----cCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 34 ISYMAERVVGTGSFGIVFQAKC----LETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~----~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
.+|++.+.||+|+||.||+|.. ..+++.||+|.+..... ...+|+++++.++||||+++++++.. .+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCCC
Confidence 4799999999999999999974 45788999999865432 34579999999999999999887643 2334
Q ss_pred eEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+++||||++ ++|.+.+... ...+++..++.++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~-~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVES-ENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECC-CCeEEECCCccc
Confidence 5889999998 4777666532 3458999999999999999999999 79999999999999986 778999999999
Q ss_pred cccccCCCc----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC-CCCHH
Q 017139 185 KVLVKGEAN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-TPTRE 259 (376)
Q Consensus 185 ~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~-~~~~~ 259 (376)
......... ....++..|+|||.+.+. .++.++|+|||||++|+|++|..|+...... ....+..... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTES-KFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDKQGQMIVY 233 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccC-CcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hhhhcccccccccchH
Confidence 865433221 111234469999998654 4899999999999999999998776543211 1110000000 00000
Q ss_pred HHh-hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 260 EIR-CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 260 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+. ..... .....+..++.++.+++.+||..+|++|||+.++++
T Consensus 234 ~~~~~~~~~-------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 234 HLIELLKNN-------------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHHHhcC-------------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 000 00000 000123457889999999999999999999999874
No 361
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=6.2e-38 Score=278.27 Aligned_cols=237 Identities=24% Similarity=0.346 Sum_probs=186.3
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
++||.|+||.||+|.+.. ++.||+|.+..... ....|+++++.++|+||+++++++ .+....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC-----VQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCCeEEEEEcC
Confidence 479999999999999877 99999998865432 345689999999999999999988 4444588999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 193 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (376)
++ +|.+.+.. ....+++..+..++.|++.||.|||+ +|++||||+|+||+++. ++.++|+|||.+.........
T Consensus 75 ~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~-~~~~~l~d~g~~~~~~~~~~~ 149 (251)
T cd05041 75 PGGSLLTFLRK---KKNRLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGE-NNVLKISDFGMSREEEGGIYT 149 (251)
T ss_pred CCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcC-CCcEEEeeccccccccCCcce
Confidence 85 56555543 23468899999999999999999999 79999999999999996 778999999998755322111
Q ss_pred ---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCc
Q 017139 194 ---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 269 (376)
Q Consensus 194 ---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (376)
.....+..|+|||.+.+. .++.++|+|||||++|+|++ |..||...........+.....
T Consensus 150 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~--------------- 213 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALNYG-RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYR--------------- 213 (251)
T ss_pred eccccCcceeccCChHhhccC-CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCC---------------
Confidence 112224569999998654 48999999999999999999 8899987765443333221100
Q ss_pred CccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 270 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...+.++.+++.+||..+|++|||++++++
T Consensus 214 -------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 214 -------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred -------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 0123356889999999999999999999999874
No 362
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.1e-38 Score=281.02 Aligned_cols=244 Identities=27% Similarity=0.376 Sum_probs=191.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC---CcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET---GETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~---~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
.++|.+.+.||.|+||.||+|.+... ...+++|...... .....|+.+++.++||||+++++++. +.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~ 79 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-----EN 79 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-----CC
Confidence 35699999999999999999987544 3468999876443 13446899999999999999998773 22
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
..|+||||+++ +|.+.+... ...+++..++.++.|++.||+|||+ .|++|+||||+||+++. ++.++|+|||+
T Consensus 80 -~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~-~~~~~l~d~g~ 153 (270)
T cd05056 80 -PVWIVMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSS-PDCVKLGDFGL 153 (270)
T ss_pred -CcEEEEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEec-CCCeEEccCce
Confidence 26799999985 676666542 3458999999999999999999999 79999999999999996 77899999999
Q ss_pred ccccccCCCcc--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 184 AKVLVKGEANI--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 184 ~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
+.......... ...++..|+|||.+... .++.++|+|||||++|++++ |..||.+.+..+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~------ 226 (270)
T cd05056 154 SRYLEDESYYKASKGKLPIKWMAPESINFR-RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER------ 226 (270)
T ss_pred eeecccccceecCCCCccccccChhhhccC-CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc------
Confidence 87654432211 12234579999998654 48999999999999999996 9999988776655544322100
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+..++.++.+++.+||..+|++|||+.+++.
T Consensus 227 ----------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 227 ----------------------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred ----------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0123457889999999999999999999999864
No 363
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.3e-38 Score=279.43 Aligned_cols=243 Identities=24% Similarity=0.347 Sum_probs=191.2
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
.++|.+.+.||+|+||.||+|.+. .+..+|+|.+..... ...+|+.+++.++|+||+++++++.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeEE
Confidence 367999999999999999999864 456799998865432 34469999999999999999888732 34789
Q ss_pred Eeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 110 VMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 110 v~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|||+++ +|.+.+... ....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||.+....
T Consensus 78 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 78 ITEFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSA-SLVCKIADFGLARVIE 153 (260)
T ss_pred EEEeCCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcC-CCcEEECCCcceeecc
Confidence 9999984 777776542 24567888999999999999999999 79999999999999996 7889999999987653
Q ss_pred cCCC--cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 189 KGEA--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 189 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
.... .....++..|+|||.+... .++.++|+|||||++|++++ |..||.+.+.......+.....
T Consensus 154 ~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~----------- 221 (260)
T cd05073 154 DNEYTAREGAKFPIKWTAPEAINFG-SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR----------- 221 (260)
T ss_pred CCCcccccCCcccccccCHhHhccC-CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-----------
Confidence 3221 1122345679999998654 48999999999999999998 9999987765544443322100
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
. ..+...+.++.+++.+||+.||++||++.+++
T Consensus 222 -------~----------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 254 (260)
T cd05073 222 -------M----------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 254 (260)
T ss_pred -------C----------CCcccCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 0 01234688999999999999999999998875
No 364
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.5e-38 Score=277.55 Aligned_cols=237 Identities=24% Similarity=0.369 Sum_probs=185.4
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
++||+|+||.||+|... ++..+|+|.+..... ...+|+++++.++||||+++++++. .....++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECC
Confidence 47899999999999854 688999998765432 2346899999999999999999873 344588999999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 193 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (376)
++ +|.+.+.. ....+++..+..++.|++.||.|||+ +|++|+||+|+||+++. ++.+||+|||++.........
T Consensus 75 ~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~~~~~~~~ 149 (250)
T cd05085 75 PGGDFLSFLRK---KKDELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGE-NNVLKISDFGMSRQEDDGIYS 149 (250)
T ss_pred CCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcC-CCeEEECCCccceeccccccc
Confidence 85 55555533 23458899999999999999999999 79999999999999986 788999999998754332211
Q ss_pred c--eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 194 I--SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 194 ~--~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
. ...++..|+|||.+.+. .++.++|+||||+++|++++ |..||.+.........+....
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------- 211 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNYG-RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY----------------- 211 (250)
T ss_pred cCCCCCCcccccCHHHhccC-CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-----------------
Confidence 1 12235679999998654 48899999999999999998 999998776554443332210
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
....+..++.++.+++.+||..+|++||++.++++
T Consensus 212 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 212 -----------RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 00122356889999999999999999999999864
No 365
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.1e-38 Score=280.86 Aligned_cols=246 Identities=21% Similarity=0.291 Sum_probs=183.6
Q ss_pred eeeccCCceEEEEEEEcC--CCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLE--TGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~--~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.||+|+||.||+|.... ....+++|.+..... ...+|+.+++.++||||+++++.+ .....+|+|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~-----~~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC-----IESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE-----CCCCceEEEEE
Confidence 368999999999996533 345788887754321 234688899999999999999988 34445899999
Q ss_pred cccc-hHHHHHHhhhhc-CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 113 YVPE-TMYRVLKHYSSM-NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
|+++ +|.+.+...... ....++..+..++.||+.||+|||+ +||+||||||+|||++. ++.+||+|||++......
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTA-DLSVKIGDYGLALEQYPE 153 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecC-CCcEEEeccccccccccc
Confidence 9985 777766553321 2345678888999999999999999 79999999999999996 788999999998654322
Q ss_pred CC---cceeeccccccChhhhhC------CCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 191 EA---NISYICSRYYRAPELIFG------ATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 191 ~~---~~~~~~t~~y~aPE~~~~------~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
.. .....++..|+|||++.. ...++.++|+|||||++|+|++ |..||......+.+..........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~---- 229 (269)
T cd05042 154 DYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIK---- 229 (269)
T ss_pred hheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCcc----
Confidence 11 122334667999999743 2246889999999999999999 789998777666555444321110
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+ ....+..++..+.+++..|+ .||++|||++++++
T Consensus 230 ------------~~-------~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 230 ------------LP-------KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ------------CC-------CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 00 01123457888999999998 59999999999864
No 366
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.7e-38 Score=281.53 Aligned_cols=244 Identities=25% Similarity=0.337 Sum_probs=192.6
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCc----EEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
..++|.+.+.||+|+||.||+|.+..+|+ .+|+|.+..... ...+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 80 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS---- 80 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 34679999999999999999999877665 589998765432 23468999999999999999998743
Q ss_pred CceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
...++||||+++ +|.+.+.. ....+++..+..++.|++.||+|||+ +|++|+||||+||+++. ++.+||+||
T Consensus 81 --~~~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~-~~~~kL~df 153 (279)
T cd05057 81 --SQVQLITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKT-PQHVKITDF 153 (279)
T ss_pred --CceEEEEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcC-CCeEEECCC
Confidence 347899999984 66666654 23458999999999999999999999 79999999999999986 778999999
Q ss_pred CCccccccCCCcce---eeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q 017139 182 GSAKVLVKGEANIS---YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPT 257 (376)
Q Consensus 182 g~~~~~~~~~~~~~---~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (376)
|.++.......... ..++..|+|||.+... .++.++|+|||||++|++++ |..||.+....+....+.... .
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~-- 229 (279)
T cd05057 154 GLAKLLDVDEKEYHAEGGKVPIKWMALESILHR-IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-R-- 229 (279)
T ss_pred cccccccCcccceecCCCcccccccCHHHhhcC-CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-C--
Confidence 99976543322111 1224579999998654 48999999999999999998 999998876655444333210 0
Q ss_pred HHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 258 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
...+...+.++.+++.+||..||++||++.+++
T Consensus 230 -------------------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~ 262 (279)
T cd05057 230 -------------------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELI 262 (279)
T ss_pred -------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 001234577899999999999999999999875
No 367
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.2e-38 Score=284.04 Aligned_cols=256 Identities=25% Similarity=0.382 Sum_probs=188.3
Q ss_pred ceEeeeeeccCCceEEEEEEE----cCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKC----LETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~----~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
-|.+.+.||+|+||.||+|+. ..++..||+|.+.... ....+|+.+++.++||||+++++++.. .+..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCCC
Confidence 478999999999999999984 4568899999986432 234579999999999999999987743 2234
Q ss_pred eEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.+++||||++| +|.+.+.. ....+++..+..++.|++.||+|||+ +|++||||||+||+++. ++.++|+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~-~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVES-EHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcC-CCCEEECCCccc
Confidence 57899999985 66665543 23458999999999999999999999 79999999999999986 778999999998
Q ss_pred cccccCCCc----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH-
Q 017139 185 KVLVKGEAN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE- 259 (376)
Q Consensus 185 ~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~- 259 (376)
......... ....++..|+|||.+.+. .++.++|+|||||++|+|+++..|+..... .. .+..+....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Di~slG~il~ellt~~~~~~~~~~--~~---~~~~~~~~~~~ 230 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQS-KFYIASDVWSFGVTLYELLTYCDSESSPMT--LF---LKMIGPTHGQM 230 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccC-CCCccccchhhhhhhhhhhcCCCCCccccc--hh---hhhcccccccc
Confidence 765433221 123456679999998664 489999999999999999998876533211 00 0111100000
Q ss_pred ----HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 260 ----EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 260 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
........ .....+..++.++.+|+.+||+.||++|||+.+++++
T Consensus 231 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 231 TVTRLVRVLEEG-------------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred cHHHHHHHHHcC-------------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 00000000 0001234578999999999999999999999999753
No 368
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=298.02 Aligned_cols=245 Identities=21% Similarity=0.310 Sum_probs=190.7
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
++..+...||+|.||+||+|++-. .||||++..+. +.++.|+.+++.=+|.||+-+.+++. ... +
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~-----~p~-~ 462 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM-----NPP-L 462 (678)
T ss_pred HHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc-----CCc-e
Confidence 456778899999999999999854 59999986543 34557999999999999999999883 333 3
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.||+-+|+| +|+.+++.. ...|.....+.|+.|++.|+.|||. ++|||||||..|||+.. ++.|||+|||++..
T Consensus 463 AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~-~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHE-DLKVKIGDFGLATV 537 (678)
T ss_pred eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEcc-CCcEEEecccceee
Confidence 799999998 777777653 3679999999999999999999999 89999999999999995 78999999999865
Q ss_pred ccc---CCCcceeeccccccChhhhhC--CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 187 LVK---GEANISYICSRYYRAPELIFG--ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 187 ~~~---~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
-.- ........|...|||||+++. ...|+..+|||||||++|||++|..||...+.+..+..+=+..+.+...
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s-- 615 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLS-- 615 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccch--
Confidence 322 112223446778999999853 3358999999999999999999999998554443332221111111111
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
....+.+.++++|+..||.+++++||...+||.
T Consensus 616 ----------------------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 616 ----------------------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ----------------------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 122356789999999999999999999988875
No 369
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.7e-38 Score=280.46 Aligned_cols=237 Identities=17% Similarity=0.185 Sum_probs=177.1
Q ss_pred eeeccCCceEEEEEEEcCC------------CcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 40 RVVGTGSFGIVFQAKCLET------------GETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~------------~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
+.||+|+||.||+|+.... ...+++|.+..... ...+|+.+++.++||||+++++++. +
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----R 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c
Confidence 4689999999999985422 23588888754332 2345788999999999999999873 3
Q ss_pred ceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC------cEE
Q 017139 104 ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH------QVK 177 (376)
Q Consensus 104 ~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~------~~k 177 (376)
+...++||||++++.+..+... ....+++..++.++.||+.||+|||+ +||+||||||+|||++.++. .++
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEecCCccCCCCceeE
Confidence 3447899999996543333221 23568999999999999999999999 79999999999999975221 389
Q ss_pred EEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCC
Q 017139 178 LCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTP 256 (376)
Q Consensus 178 l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-tg~~pf~~~~~~~~~~~~~~~~~~~ 256 (376)
++|||++...... ....++..|+|||.+.....++.++|||||||++|+|+ +|..||......+... ....
T Consensus 153 l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~---- 224 (262)
T cd05077 153 LSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEG---- 224 (262)
T ss_pred eCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhc----
Confidence 9999998654322 23456788999998865556899999999999999998 5888887654332211 1110
Q ss_pred CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 257 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
. .. .....+.++.+++.+||+.||.+||+..+++++
T Consensus 225 ----------~---~~------------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 225 ----------Q---CM------------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ----------C---cc------------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0 00 111236789999999999999999999999865
No 370
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.5e-38 Score=282.97 Aligned_cols=235 Identities=19% Similarity=0.229 Sum_probs=177.9
Q ss_pred eeccCCceEEEEEEEcCC------------------------CcEEEEEEeccccc----chHHHHHHHHhCCCCCeeec
Q 017139 41 VVGTGSFGIVFQAKCLET------------------------GETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISL 92 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~~~------------------------~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~ 92 (376)
.||+|+||.||+|....+ ...+++|++..... ...+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 699999999999975321 23588888754322 23467889999999999999
Q ss_pred ceeeeecCCCCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC
Q 017139 93 KHCFFSTTSKDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 171 (376)
Q Consensus 93 ~~~~~~~~~~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~ 171 (376)
++++. +....++|||||+++ |...+.. ....+++..+..++.|++.||+|||+ +||+||||||+||+++.
T Consensus 82 ~~~~~-----~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~Nill~~ 152 (274)
T cd05076 82 HGVCV-----RGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLED-KNLVHGNVCAKNILLAR 152 (274)
T ss_pred EEEEE-----eCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcccEEEec
Confidence 99884 334588999999975 4334332 24568999999999999999999999 79999999999999974
Q ss_pred C------CCcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHH-hCCCCCCCCChHH
Q 017139 172 L------THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVD 244 (376)
Q Consensus 172 ~------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-tg~~pf~~~~~~~ 244 (376)
. ...+|++|||.+...... ....++..|+|||.+.+...++.++|+|||||++|+|+ +|..||......+
T Consensus 153 ~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 153 LGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 2 124899999987644222 22356778999998866556899999999999999995 6999998765443
Q ss_pred HHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 245 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
... ..... ..++...++++.++|.+||+.+|++|||+.+++++
T Consensus 230 ~~~-~~~~~-----------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 230 KER-FYEKK-----------------------------HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHH-HHHhc-----------------------------cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 322 11100 00122346789999999999999999999999864
No 371
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.6e-37 Score=278.66 Aligned_cols=246 Identities=20% Similarity=0.232 Sum_probs=182.5
Q ss_pred eeeccCCceEEEEEEEc--CCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCL--ETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.||+|+||.||+|... .++..+|+|.+..... ...+|+.+++.++||||+++++++ .+...+++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQC-----TEVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cCCCCcEEEEE
Confidence 46899999999999864 3456799998865432 334689999999999999999987 44445889999
Q ss_pred ccc-chHHHHHHhhhh-cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 113 YVP-ETMYRVLKHYSS-MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 113 ~~~-g~l~~~l~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
|++ |+|.+.+..... .....++..+..++.|++.||.|||+ +|++|+||||+||+++. ++.+||+|||++......
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTA-DLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcC-CCcEEECCccccccccCc
Confidence 999 477666654322 22346677888999999999999999 79999999999999996 788999999998754332
Q ss_pred CC---cceeeccccccChhhhhCCC------CCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 191 EA---NISYICSRYYRAPELIFGAT------EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 191 ~~---~~~~~~t~~y~aPE~~~~~~------~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
.. .....++..|+|||++.+.. .++.++|+|||||++|+|++ |..||......+...........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----- 228 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL----- 228 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC-----
Confidence 21 12234577899999985321 25789999999999999996 99999876655443322211000
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+ ...+....++.+.+++.+|+ .+|++|||+++++.
T Consensus 229 -----------~~~-------~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 229 -----------KLP-------KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred -----------CCC-------CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 000 00112245788999999998 68999999999863
No 372
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.3e-38 Score=281.58 Aligned_cols=241 Identities=24% Similarity=0.328 Sum_probs=187.3
Q ss_pred eeeccCCceEEEEEEEcCCC------cEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 40 RVVGTGSFGIVFQAKCLETG------ETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~------~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
+.||+|+||.||+|++.... +.+|+|.+.... ....+|+.+++.++||||+++++++ ......+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC-----LLNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeee-----cCCCCeE
Confidence 46899999999999986543 689999875432 2334689999999999999999988 3344588
Q ss_pred EEeecccc-hHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC-----cEEEE
Q 017139 109 LVMEYVPE-TMYRVLKHYSS---MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH-----QVKLC 179 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~-----~~kl~ 179 (376)
+||||+++ +|.+.+..... ....+++..+..++.|++.||+|||+ ++++|+||+|+||+++. ++ .++|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~-~~~~~~~~~~l~ 153 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSE-KGYDADRVVKIG 153 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEec-CCCCCCcceEEC
Confidence 99999984 77777754322 23457889999999999999999999 79999999999999986 44 79999
Q ss_pred ecCCccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCC
Q 017139 180 DFGSAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGT 255 (376)
Q Consensus 180 Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~ 255 (376)
|||++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+... ..
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~ 231 (269)
T cd05044 154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG-KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-GR 231 (269)
T ss_pred CcccccccccccccccCcccCCCccccCHHHHccC-CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-Cc
Confidence 9999875533211 1123446789999998765 48999999999999999998 99999877665544433210 00
Q ss_pred CCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 256 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+..++..+.++|.+||..+|++||+++++++
T Consensus 232 ---------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 232 ---------------------------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ---------------------------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0122356889999999999999999999999864
No 373
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-37 Score=277.42 Aligned_cols=241 Identities=23% Similarity=0.351 Sum_probs=190.9
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc--cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
..+|++.+.||+|+||.||++.. +++.+|+|.+..+. ....+|+.+++.++||||+++++++.. +. .+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~-~~~v 76 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH-----NG-LYIV 76 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcC-----CC-cEEE
Confidence 35799999999999999999864 78899999886542 234578999999999999999988732 22 6899
Q ss_pred eecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|||+.+ +|.+.+... ....+++..+..++.|++.||.|||+ +|++||||||+||+++. ++.+||+|||++.....
T Consensus 77 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~-~~~~kl~Dfg~~~~~~~ 152 (254)
T cd05083 77 MELMSKGNLVNFLRTR--GRALVSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSE-DGVAKVSDFGLARVGSM 152 (254)
T ss_pred EECCCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcC-CCcEEECCCccceeccc
Confidence 999985 777776542 23458899999999999999999999 79999999999999986 77899999999875432
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
. ......+..|+|||.+.+. .++.++|+|||||++|+|++ |..||...+..+....+.+..
T Consensus 153 ~--~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 214 (254)
T cd05083 153 G--VDNSKLPVKWTAPEALKHK-KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY--------------- 214 (254)
T ss_pred c--CCCCCCCceecCHHHhccC-CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---------------
Confidence 2 1122335679999998654 48999999999999999997 999998876655443332210
Q ss_pred cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 269 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
. ...+..++..+.+++.+||+.+|++||++++++.
T Consensus 215 ---~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 ---R----------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred ---C----------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 0012356889999999999999999999999864
No 374
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-37 Score=283.49 Aligned_cols=245 Identities=23% Similarity=0.336 Sum_probs=190.0
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCc----EEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
.++|++.+.||+|+||.||+|.+..+|+ .+|+|.+..... ...+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 4578999999999999999999887776 468887765432 23468899999999999999998732
Q ss_pred ceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
. ..++++||++ |+|.+.+.. ....+++..+..++.|++.||.|||+ +||+|+||||+||+++. ++.+||+|||
T Consensus 81 ~-~~~~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~-~~~~kL~Dfg 154 (303)
T cd05110 81 P-TIQLVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKS-PNHVKITDFG 154 (303)
T ss_pred C-CceeeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecC-CCceEEcccc
Confidence 1 2568999998 566666543 23468899999999999999999999 79999999999999985 7789999999
Q ss_pred CccccccCCCc---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 183 SAKVLVKGEAN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 183 ~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+++........ ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||.+....+.. .++.....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~-- 230 (303)
T cd05110 155 LARLLEGDEKEYNADGGKMPIKWMALECIHYR-KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-DLLEKGERL-- 230 (303)
T ss_pred ccccccCcccccccCCCccccccCCHHHhccC-CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHCCCCC--
Confidence 99865433221 123346789999998654 48999999999999999997 99999876543332 222211100
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
+ .+...+..+.+++.+||..||++||+++++++.
T Consensus 231 ---------------~----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 231 ---------------P----------QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred ---------------C----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 112357789999999999999999999998763
No 375
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.3e-37 Score=276.44 Aligned_cols=239 Identities=23% Similarity=0.362 Sum_probs=180.8
Q ss_pred eeeccCCceEEEEEEEcC---CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEe
Q 017139 40 RVVGTGSFGIVFQAKCLE---TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
+.||+|+||.||+|.+.. .+..+|+|.+.... ....+|+.+++.++||||+++++++.. .+...+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 468999999999998754 34579999875422 233468889999999999999986642 233477999
Q ss_pred ecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 112 EYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 112 e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
||+.+ +|...+... ...+++..+..++.|++.||.|||+ .+++||||||+||+++. ++.+||+|||+++.....
T Consensus 77 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~-~~~~kl~dfg~~~~~~~~ 151 (262)
T cd05058 77 PYMKHGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDE-SFTVKVADFGLARDIYDK 151 (262)
T ss_pred ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcC-CCcEEECCccccccccCC
Confidence 99984 666666532 2446777888999999999999999 79999999999999996 778999999998754332
Q ss_pred CC-----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhc
Q 017139 191 EA-----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 264 (376)
Q Consensus 191 ~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (376)
.. .....++..|+|||.+.+. .++.++|||||||++|+|++ |.+||...+..+....+... .+
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~--~~-------- 220 (262)
T cd05058 152 EYYSVHNHTGAKLPVKWMALESLQTQ-KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG--RR-------- 220 (262)
T ss_pred cceeecccccCcCCccccChhHhccC-ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC--CC--------
Confidence 11 1122346689999998654 48999999999999999999 56778766655444332211 00
Q ss_pred CcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 265 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
...+...+..+.+++.+||..+|++||++.+++.
T Consensus 221 ------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 221 ------------------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred ------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0012345789999999999999999999999874
No 376
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.9e-37 Score=275.37 Aligned_cols=246 Identities=20% Similarity=0.252 Sum_probs=182.6
Q ss_pred eeeccCCceEEEEEEEcCC--CcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLET--GETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~--~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.||+|+||.||++..... ...+++|.+.... ....+|+.+++.++||||+++++.+ .+...+|+|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQC-----VEAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEe-----cCCCccEEEEe
Confidence 3699999999999975433 2356777665432 2334678889999999999999988 44455899999
Q ss_pred cccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCC
Q 017139 113 YVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE 191 (376)
Q Consensus 113 ~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~ 191 (376)
|+++ +|.+.+.........+++..++.++.||+.||+|||+ ++++||||||+|||++. ++.++|+|||++.......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~-~~~~~l~Dfg~~~~~~~~~ 153 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTS-DLTVKVGDYGIGPSRYKED 153 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcC-CccEEecccccccccCcch
Confidence 9995 7777776533334557778889999999999999999 79999999999999996 7789999999976432211
Q ss_pred ---CcceeeccccccChhhhhCC------CCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 192 ---ANISYICSRYYRAPELIFGA------TEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 192 ---~~~~~~~t~~y~aPE~~~~~------~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
......++..|+|||++... ..++.++|+|||||++|+|++ |..||...+..+.+..+.......
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~----- 228 (268)
T cd05086 154 YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK----- 228 (268)
T ss_pred hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc-----
Confidence 12244568889999987431 125778999999999999997 578888777666555544321100
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
.+...+...+++.+.+++..|+ .+|++||+++++++
T Consensus 229 ------------------~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 229 ------------------LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ------------------cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0011122346788999999999 68999999999863
No 377
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=291.64 Aligned_cols=243 Identities=25% Similarity=0.353 Sum_probs=195.0
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCc---E-EEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGE---T-VAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~---~-~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
+-.+.++||+|+||.||+|..+..+. . ||+|...... ...-.|+++++.++|||||+++++......
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P-- 235 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP-- 235 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc--
Confidence 33456899999999999998876432 3 8999886422 223469999999999999999998865544
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
+++|||+|.| +|.++|+.. ...++..+...++.+.+.||+|||+ ++++||||-..|+|++. ++.+||+|||
T Consensus 236 ---l~ivmEl~~gGsL~~~L~k~---~~~v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~-~~~vKISDFG 307 (474)
T KOG0194|consen 236 ---LMLVMELCNGGSLDDYLKKN---KKSLPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSK-KGVVKISDFG 307 (474)
T ss_pred ---cEEEEEecCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecC-CCeEEeCccc
Confidence 8999999996 777777763 2369999999999999999999999 89999999999999996 6778999999
Q ss_pred CccccccCCCccee-eccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 183 SAKVLVKGEANISY-ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 183 ~~~~~~~~~~~~~~-~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
+++........... .-...|+|||.+... .|+.++|||||||++||+++ |..||.+....+....+.....
T Consensus 308 Ls~~~~~~~~~~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~------ 380 (474)
T KOG0194|consen 308 LSRAGSQYVMKKFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY------ 380 (474)
T ss_pred cccCCcceeeccccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc------
Confidence 98865422222211 235679999999765 59999999999999999998 8899999998888877754211
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
....+...+.++..++.+|+..||++|||..++.
T Consensus 381 ---------------------r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 381 ---------------------RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIK 414 (474)
T ss_pred ---------------------cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHH
Confidence 1113345688999999999999999999998875
No 378
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.4e-37 Score=275.62 Aligned_cols=233 Identities=19% Similarity=0.195 Sum_probs=179.6
Q ss_pred eeeccCCceEEEEEEEcCCC----------cEEEEEEecccc---cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 40 RVVGTGSFGIVFQAKCLETG----------ETVAIKKVLQDR---RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~----------~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
+.||+|+||.||+|.+..++ ..+++|.+.... ....+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR------DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec------CC
Confidence 46899999999999998776 358888775443 234578899999999999999998743 23
Q ss_pred EEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCC-------cEEE
Q 017139 107 LNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH-------QVKL 178 (376)
Q Consensus 107 ~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~-------~~kl 178 (376)
.++||||+++ +|...+... ...+++..+..++.||+.||+|||+ +||+||||||+||+++. ++ .+||
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~-~~~~~~~~~~~kl 149 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVAR-YGLNEGYVPFIKL 149 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEec-CccccCCceeEEe
Confidence 6899999996 555555432 2268999999999999999999999 79999999999999986 44 6999
Q ss_pred EecCCccccccCCCcceeeccccccChhhhhCC-CCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q 017139 179 CDFGSAKVLVKGEANISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTP 256 (376)
Q Consensus 179 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~ 256 (376)
+|||++..... .....++..|+|||.+.+. ..++.++|+|||||++|+|++ |..||...+.......... .
T Consensus 150 ~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~--- 222 (259)
T cd05037 150 SDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-Q--- 222 (259)
T ss_pred CCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-C---
Confidence 99999876543 2234556789999998765 358899999999999999999 5888876543222211110 0
Q ss_pred CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 257 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
. ..+......+.+++.+||+.||++|||+.++++
T Consensus 223 ------------~--------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 223 ------------H--------------RLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ------------C--------------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 011112378999999999999999999999874
No 379
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.9e-37 Score=275.96 Aligned_cols=250 Identities=22% Similarity=0.302 Sum_probs=189.7
Q ss_pred eEeeeeeccCCceEEEEEEEcC---CCcEEEEEEeccccc------chHHHHHHHHhCCCCCeeecceeeeecCCCC-ce
Q 017139 36 YMAERVVGTGSFGIVFQAKCLE---TGETVAIKKVLQDRR------YKNRELQLMRLMDHPNVISLKHCFFSTTSKD-EL 105 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~~------~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~-~~ 105 (376)
|.+.+.||+|+||.||+|.... +++.+|||.+..+.. ...+|+.+++.++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 6788999999999999998653 578999998865421 2346899999999999999999875433222 22
Q ss_pred eEEEEeecccc-hHHHHHHhhh--hcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 106 FLNLVMEYVPE-TMYRVLKHYS--SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 106 ~~~lv~e~~~g-~l~~~l~~~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
..++++||+.+ +|...+.... .....+++..++.++.|++.||+|||+ +||+||||||+||+++. ++.+||+|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~-~~~~kl~dfg 158 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNE-NMTVCVADFG 158 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcC-CCCEEECccc
Confidence 35788999984 5555543221 122357889999999999999999999 79999999999999986 7789999999
Q ss_pred CccccccCCC---cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCH
Q 017139 183 SAKVLVKGEA---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTR 258 (376)
Q Consensus 183 ~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (376)
+++....... .....+++.|++||.+.+. .++.++|+|||||++|+|++ |.+||.+.+..+....+... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-~~~-- 234 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADN-VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-NRL-- 234 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcC-ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-CcC--
Confidence 9886543221 1223345679999998654 47899999999999999999 89999877665444333321 000
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+...+..+.+++.+||..+|++||++.++++
T Consensus 235 -------------------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 235 -------------------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred -------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011246789999999999999999999999875
No 380
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.6e-38 Score=300.61 Aligned_cols=244 Identities=24% Similarity=0.331 Sum_probs=200.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcC-----CCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~-----~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
+-...+.||+|+||+||+|+.-. ....||||.++... ..+++|++++..++|||||++++++. .+
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~-----~~ 561 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR-----EG 561 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-----cC
Confidence 45668899999999999998643 34579999997654 34668999999999999999999994 33
Q ss_pred eeEEEEeeccc-chHHHHHHhhhh------cC----CCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC
Q 017139 105 LFLNLVMEYVP-ETMYRVLKHYSS------MN----QRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT 173 (376)
Q Consensus 105 ~~~~lv~e~~~-g~l~~~l~~~~~------~~----~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~ 173 (376)
.-+|+|+|||. |+|.++|..... .+ .+++..+...|+.||+.|++||-+ +.+|||||-..|+||+. +
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLATRNCLVge-~ 639 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLATRNCLVGE-N 639 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhhhhceecc-c
Confidence 34899999999 788888876432 12 338899999999999999999999 79999999999999996 8
Q ss_pred CcEEEEecCCccccccCCCcc---eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 017139 174 HQVKLCDFGSAKVLVKGEANI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEI 249 (376)
Q Consensus 174 ~~~kl~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~ 249 (376)
..|||+|||+++..-..+-.. ...-...|||||.+.-+ .++.+|||||+||+|||+++ |..||.+..+.+.++.+
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 899999999998643222111 12235679999999755 59999999999999999997 99999999998888776
Q ss_pred HHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHH
Q 017139 250 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 314 (376)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el 314 (376)
.+..- ...|++.|.++.+|+..||+.+|.+||+..||
T Consensus 719 ~~g~l----------------------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 719 RAGQL----------------------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred HcCCc----------------------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 55210 11456789999999999999999999999987
No 381
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=8.6e-37 Score=275.80 Aligned_cols=260 Identities=25% Similarity=0.344 Sum_probs=190.3
Q ss_pred cceEeeeeeccCCceEEEEEEEcC----CCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLE----TGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
++|.+.+.||+|+||.||+|.... +++.+|+|.+..... ...+|+++++.++||||+++++++.. .+.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 468889999999999999998643 478999999875543 34578999999999999999887633 234
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
.+.+++|||+++ +|.+.+... ...+++..+..++.|++.||+|||+ +|++|+||||+||+++. ++.++|+|||.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~-~~~~~l~dfg~ 155 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVES-EDLVKISDFGL 155 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcC-CCCEEEccccc
Confidence 568899999985 776666542 2358999999999999999999999 79999999999999996 78899999999
Q ss_pred ccccccCCCc----ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-hcCCCCH
Q 017139 184 AKVLVKGEAN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK-VLGTPTR 258 (376)
Q Consensus 184 ~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~-~~~~~~~ 258 (376)
+......... ....++..|+|||.+.+. .++.++|+|||||++|+|++|..||......... +.. ..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~ 232 (284)
T cd05038 156 AKVLPEDKDYYYVKEPGESPIFWYAPECLRTS-KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR--MIGIAQGQMIV 232 (284)
T ss_pred ccccccCCcceeccCCCCCcccccCcHHHccC-CCCcccchHHHhhhhheeeccCCCcccccchhcc--ccccccccccH
Confidence 9876532221 112335569999998655 4899999999999999999999998654321100 000 0000000
Q ss_pred HHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 259 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
..+...... ... ...+...+.++.+++.+||..||++|||+.++++
T Consensus 233 ~~~~~~~~~--~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 233 TRLLELLKE--GER----------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHHHHc--CCc----------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 000000000 000 0012345788999999999999999999999874
No 382
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=8.6e-38 Score=277.21 Aligned_cols=284 Identities=28% Similarity=0.475 Sum_probs=215.9
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcC---CCcEEEEEEecccc--cchHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLE---TGETVAIKKVLQDR--RYKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~---~~~~~aiK~~~~~~--~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
-|...+.|.++++||.|.|++||++.+.. ..+.||+|.+.... .....|.++|..+ .+.||+++.+++ .
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~-----r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCF-----R 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhh-----c
Confidence 45667889999999999999999999887 78899999885443 3456799999988 589999999998 6
Q ss_pred CceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 103 DELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
.+..+.+|+||++.. ..++.. .++...++.+++.++.||.++|. +|||||||||+|+|.+...+.-.|+||
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~LvDF 177 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVLVDF 177 (418)
T ss_pred cCCeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceEEec
Confidence 777799999999953 222322 36788899999999999999999 899999999999999987888999999
Q ss_pred CCcccccc----------------C-----------------------------CCcceeeccccccChhhhhCCCCCCc
Q 017139 182 GSAKVLVK----------------G-----------------------------EANISYICSRYYRAPELIFGATEYTT 216 (376)
Q Consensus 182 g~~~~~~~----------------~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 216 (376)
|+|..... . .......||+.|+|||++...+..++
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 99862100 0 00113468999999999988887899
Q ss_pred cchhHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHHhcCCCCHHHHhhcCcC------------------CcCccCCCCC
Q 017139 217 SIDIWSAGCVLAELLLGQPLFP-GENAVDQLVEIIKVLGTPTREEIRCMNPN------------------YTDFRFPQIK 277 (376)
Q Consensus 217 ~~DiwslG~il~~lltg~~pf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 277 (376)
++||||.|+|+..+++++.||- ..++.+.+.++...+|...-......... +.......+.
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 9999999999999999999874 45666777777777665433222211111 1111001111
Q ss_pred C----CCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 278 A----HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 278 ~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
. ..+.....+..+..+.||+.+||+.||.+|+|++++|.||||.....
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR 389 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence 1 01233333455678999999999999999999999999999986543
No 383
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.1e-36 Score=287.16 Aligned_cols=274 Identities=23% Similarity=0.292 Sum_probs=183.4
Q ss_pred ccccceEeeeeeccCCceEEEEEEEc----------------CCCcEEEEEEecccccc------------------hHH
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCL----------------ETGETVAIKKVLQDRRY------------------KNR 76 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~----------------~~~~~~aiK~~~~~~~~------------------~~~ 76 (376)
...++|.+.++||+|+||+||+|... ..++.||||++...... ...
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 45679999999999999999999752 24567999998543211 123
Q ss_pred HHHHHHhCCCCCe-----eecceeeeecCC---CCceeEEEEeecccc-hHHHHHHhhhh--------------------
Q 017139 77 ELQLMRLMDHPNV-----ISLKHCFFSTTS---KDELFLNLVMEYVPE-TMYRVLKHYSS-------------------- 127 (376)
Q Consensus 77 e~~~l~~l~h~~I-----v~~~~~~~~~~~---~~~~~~~lv~e~~~g-~l~~~l~~~~~-------------------- 127 (376)
|+.++..++|.++ +++++++..... ......++||||+++ +|.+.+.....
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 5666677766554 555555532211 123447899999995 66666643110
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCcce--eeccccccCh
Q 017139 128 MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS--YICSRYYRAP 205 (376)
Q Consensus 128 ~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~t~~y~aP 205 (376)
....+++..++.++.|++.+|.|||+ .+|+||||||+||+++. ++.+||+|||++........... ..+++.|+||
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTV-DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECC-CCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 11234667889999999999999999 79999999999999996 77899999999875543322222 2347899999
Q ss_pred hhhhCCCC-------------------C--CccchhHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 206 ELIFGATE-------------------Y--TTSIDIWSAGCVLAELLLGQP-LFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 206 E~~~~~~~-------------------~--~~~~DiwslG~il~~lltg~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
|.+..... + ....|+||+||++|+|++|.. ||.+......- .+... .....|..
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~---~~~~~-~~~~~~r~ 455 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE---LRQYD-NDLNRWRM 455 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH---Hhhcc-chHHHHHh
Confidence 98753211 1 124799999999999999875 77543221110 00000 00001110
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCC---CCCCCHHHHhCCCcccc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP---SLRCTALEACAHPFFDE 322 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP---~~R~t~~ell~hp~~~~ 322 (376)
.. ...+........++.++||+.+||..+| .+|+|++|+|+||||..
T Consensus 456 ~~------------~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 456 YK------------GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred hc------------ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 00 0011111234578999999999999876 68999999999999953
No 384
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=300.50 Aligned_cols=248 Identities=21% Similarity=0.364 Sum_probs=200.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCc-----EEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGE-----TVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
...-+..+.||+|+||.||.|......- .||+|.+.+... .+.+|..+++.++|||||+++++.++...
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~- 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP- 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC-
Confidence 3566788999999999999998865433 399999876533 33479999999999999999999976443
Q ss_pred CceeEEEEeeccc-chHHHHHHhhhh---cCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEE
Q 017139 103 DELFLNLVMEYVP-ETMYRVLKHYSS---MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL 178 (376)
Q Consensus 103 ~~~~~~lv~e~~~-g~l~~~l~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl 178 (376)
.+|++|||. |+|..+|+..+. ....++......++.+|+.|++||++ +++|||||...|+|++. ...+||
T Consensus 770 ----~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNCLL~~-~r~VKI 843 (1025)
T KOG1095|consen 770 ----PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNCLLDE-RRVVKI 843 (1025)
T ss_pred ----cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhheeecc-cCcEEE
Confidence 789999999 578888876321 14568999999999999999999999 79999999999999997 788999
Q ss_pred EecCCccccccCCCcc---eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 017139 179 CDFGSAKVLVKGEANI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG 254 (376)
Q Consensus 179 ~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 254 (376)
+|||+|+..-...-.. ...-...|||||.+... .++.++|||||||++||+++ |..||.+.++.+.+....+. |
T Consensus 844 aDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~-iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-g 921 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDG-IFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-G 921 (1025)
T ss_pred cccchhHhhhhchheeccCccccceecCCHHHHhhc-ccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC-C
Confidence 9999998432221111 11124569999999764 59999999999999999998 99999999988887755542 1
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhC
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 316 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 316 (376)
+. ..|...+..+.+++.+||+.+|++||+...+++
T Consensus 922 RL---------------------------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 922 RL---------------------------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred cc---------------------------CCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 11 134568899999999999999999999998885
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-37 Score=292.49 Aligned_cols=249 Identities=31% Similarity=0.430 Sum_probs=190.6
Q ss_pred eEeeeeeccCCceE-EEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHhC-CCCCeeecceeeeecCCCCceeEEEEee
Q 017139 36 YMAERVVGTGSFGI-VFQAKCLETGETVAIKKVLQDRR-YKNRELQLMRLM-DHPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 36 y~~~~~Lg~G~~g~-V~~~~~~~~~~~~aiK~~~~~~~-~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
|.-.+++|.|+.|+ ||+|.. .|+.||||++..... ..++|+.+|+.- +||||+++++.- .+..++||+.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEEEeh
Confidence 34456789999985 599987 789999999876654 778999999988 599999987654 77888999999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC----CCCcEEEEecCCccccc
Q 017139 113 YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP----LTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 113 ~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~----~~~~~kl~Dfg~~~~~~ 188 (376)
.|..+|.+++...............+.++.|++.||++||+ -+||||||||.||||+. ...+++|+|||+++...
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 99999999987631111122224457788999999999999 59999999999999975 23579999999999876
Q ss_pred cCCC----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 189 KGEA----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 189 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
.+.. .....||..|+|||.+.... -..++||||+||++|..++| ..||...-. .-.+|+.. ...
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~--~~~------ 731 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTG--NYT------ 731 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccc-cCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcC--ccc------
Confidence 5433 33456899999999997765 57799999999999999985 899965422 11222220 000
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 321 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~ 321 (376)
.-. +......++.|||.+||.+||..||+|.++|.||||=
T Consensus 732 ---------L~~---------L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 732 ---------LVH---------LEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ---------eee---------eccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 000 1111122899999999999999999999999999993
No 386
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=3.2e-35 Score=258.58 Aligned_cols=238 Identities=39% Similarity=0.653 Sum_probs=191.9
Q ss_pred CceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecccc-hHH
Q 017139 46 SFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMY 119 (376)
Q Consensus 46 ~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g-~l~ 119 (376)
+||.||+|.+..+|+.+|+|++.... ....+|++.++.++|+||+++++++. .....++++||+++ +|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-----DEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-----eCCEEEEEEeCCCCCCHH
Confidence 58999999999899999999986543 34457999999999999999999884 33558899999997 777
Q ss_pred HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCcceeecc
Q 017139 120 RVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 199 (376)
Q Consensus 120 ~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t 199 (376)
+.+.. ...++...++.++.+++.++.+||+ .+++|+||+|+||+++. ++.++|+|||.+.............++
T Consensus 76 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~-~~~~~l~d~~~~~~~~~~~~~~~~~~~ 149 (244)
T smart00220 76 DLLKK----RGRLSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDE-DGHVKLADFGLARQLDPGGLLTTFVGT 149 (244)
T ss_pred HHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECC-CCcEEEccccceeeeccccccccccCC
Confidence 66654 2338899999999999999999999 79999999999999996 688999999999877655444566778
Q ss_pred ccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCC
Q 017139 200 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAH 279 (376)
Q Consensus 200 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (376)
..|++||.+.+. .++.++|+||+|++++++++|..||..........+.........
T Consensus 150 ~~~~~pE~~~~~-~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---------------------- 206 (244)
T smart00220 150 PEYMAPEVLLGK-GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF---------------------- 206 (244)
T ss_pred cCCCCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC----------------------
Confidence 899999998654 478899999999999999999999987433333333322100000
Q ss_pred CcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 280 PWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 280 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
......++.++.+++.+||..||++||++.++++||||
T Consensus 207 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 207 ---PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ---ccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 00011167899999999999999999999999999997
No 387
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-36 Score=275.05 Aligned_cols=242 Identities=22% Similarity=0.375 Sum_probs=200.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
.+.++.++||.|.||.||.+.++...-.||||.++.+.- .+.+|+.+++.++|||+|++++++..+.. +|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP-----FYIi 341 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP-----FYII 341 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC-----eEEE
Confidence 356778899999999999999999999999999987743 34579999999999999999999854433 8899
Q ss_pred eeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 111 MEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 111 ~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
+|||. |+|+++|..... ..++.-.+..++.||..|++||.. +++|||||-..|+|+.. ++.+|++|||+++.+..
T Consensus 342 TEfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLEk-knFIHRDLAARNCLVgE-nhiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGE-NHIVKVADFGLSRLMTG 417 (1157)
T ss_pred EecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhhccccc-cceEEeeccchhhhhcC
Confidence 99987 899999987543 457777888999999999999999 89999999999999996 88899999999998854
Q ss_pred CCCcceeec---cccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcC
Q 017139 190 GEANISYIC---SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 265 (376)
Q Consensus 190 ~~~~~~~~~---t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (376)
+. .+...| ..-|.|||-+.- ..++.++|||+|||+|||++| |..||++.+-.+.+..+.+-
T Consensus 418 DT-YTAHAGAKFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg------------- 482 (1157)
T KOG4278|consen 418 DT-YTAHAGAKFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG------------- 482 (1157)
T ss_pred Cc-eecccCccCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-------------
Confidence 42 223333 556999998854 458999999999999999998 89999998766555443331
Q ss_pred cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHH
Q 017139 266 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 314 (376)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el 314 (376)
|+.. -++++++.+.+|+..||+|+|++||+..|+
T Consensus 483 -----yRM~----------~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 483 -----YRMD----------GPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred -----cccc----------CCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 1111 245789999999999999999999998876
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-36 Score=242.24 Aligned_cols=215 Identities=22% Similarity=0.401 Sum_probs=178.9
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccc-----hHHHHHHHHh-CCCCCeeecceeeeecCCCCc
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-----KNRELQLMRL-MDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~e~~~l~~-l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
..-++..-...||+|+||.|-+.++..+|...|+|.+...... ..+|+++..+ ..+|++|.+++.++...+
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd--- 119 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD--- 119 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc---
Confidence 3445666677899999999999999999999999998644322 2235554433 368999999998865554
Q ss_pred eeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 105 LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 105 ~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
++|.||.+.-+|..+-.+....++.++|..+-+|+..++.||.|||+.-.++|||+||+|||+|. ++.+|+||||.+
T Consensus 120 --vwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~-~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 --VWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY-DGQVKICDFGIS 196 (282)
T ss_pred --EEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc-CCcEEEcccccc
Confidence 89999999999888888888889999999999999999999999998557999999999999997 889999999999
Q ss_pred cccccCCCcceeeccccccChhhhhC---CCCCCccchhHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHH
Q 017139 185 KVLVKGEANISYICSRYYRAPELIFG---ATEYTTSIDIWSAGCVLAELLLGQPLFPG-ENAVDQLVEIIK 251 (376)
Q Consensus 185 ~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~~~~~~ 251 (376)
....+.-..+...|-..|||||.+.. ...|+.++||||||+++.||++++.||.. .++.+++.++++
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 88877666665667778999999843 23589999999999999999999999975 466777777765
No 389
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=273.76 Aligned_cols=239 Identities=30% Similarity=0.444 Sum_probs=191.6
Q ss_pred eEeeeeeccCCceEEEEEEEcCC--C--cEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 36 YMAERVVGTGSFGIVFQAKCLET--G--ETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~--~--~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.+..++||.|-||.||.|....- | -.||||.-+.+. ..+..|..+++.++||||+++++++....
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P------ 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP------ 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc------
Confidence 34567899999999999987532 3 358999876543 23346899999999999999999984321
Q ss_pred EEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+||||.++ |.|.++++.. ...++......++.||+.||.|||+ +.+|||||-..|||+.+ ...+||+|||+++
T Consensus 465 ~WivmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsS-p~CVKLaDFGLSR 539 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSS-PQCVKLADFGLSR 539 (974)
T ss_pred eeEEEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecC-cceeeecccchhh
Confidence 789999999 7777777663 4678889999999999999999999 89999999999999997 6679999999999
Q ss_pred ccccCCCcceeec--cccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 186 VLVKGEANISYIC--SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 186 ~~~~~~~~~~~~~--t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
...++.-.....| ..-|||||.+.-. .++.++|||.|||.+||+++ |..||.+..+.+.+..+.+.-
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfR-rFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGe--------- 609 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFR-RFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGE--------- 609 (974)
T ss_pred hccccchhhccccccceeecCccccchh-cccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCC---------
Confidence 8876654443344 4569999998544 48999999999999999986 999999887665554333210
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHH
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 314 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el 314 (376)
....|++.|+.+..|..+||++||.+||+..++
T Consensus 610 -------------------RlP~P~nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 610 -------------------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred -------------------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence 112456789999999999999999999987654
No 390
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=268.69 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=198.2
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
....++++||+|-||.|.+|.- ..+..||+|+++.+. ..+.+|+++|.+++||||+.+.+++..... ++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP-----ic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP-----LC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc-----hH
Confidence 5678999999999999999985 346899999997653 345689999999999999999999965444 89
Q ss_pred EEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 109 LVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 109 lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|+||++ |+|..++..... ..+.-....+|+.||+.|++||.+ -++|||||.+.|+|++. ++++||+|||.++..
T Consensus 612 mI~EYmEnGDLnqFl~ahea--pt~~t~~~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~-e~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHEL--PTAETAPGVSICTQIASGMAYLES-LNFVHRDLATRNCLVDG-EFTIKIADFGMSRNL 687 (807)
T ss_pred HHHHHHhcCcHHHHHHhccC--cccccchhHHHHHHHHHHHHHHHh-hchhhccccccceeecC-cccEEecCccccccc
Confidence 9999998 677777765422 224455566799999999999999 59999999999999996 889999999999865
Q ss_pred ccCCCcc---eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHHhcCCCCHHHHh
Q 017139 188 VKGEANI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL--LGQPLFPGENAVDQLVEIIKVLGTPTREEIR 262 (376)
Q Consensus 188 ~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll--tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (376)
-.++... ..+-...|||+|.+.-. +++.++|+|+||+++||++ +...||....+.+...+.-..+..+.+.-+
T Consensus 688 ysg~yy~vqgr~vlpiRwmawEsillg-kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~- 765 (807)
T KOG1094|consen 688 YSGDYYRVQGRAVLPIRWMAWESILLG-KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV- 765 (807)
T ss_pred ccCCceeeecceeeeeeehhHHHHHhc-cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee-
Confidence 4433221 22336789999999765 4999999999999999987 478999888777776665554433332211
Q ss_pred hcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 263 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
...|.-.+..+.+++.+||..|-.+||+.+++.
T Consensus 766 --------------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 766 --------------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred --------------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 112345788899999999999999999999983
No 391
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=272.24 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=204.0
Q ss_pred cceEeeeeeccCCceEEEEEEEcCC-Cc--EEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLET-GE--TVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~-~~--~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
++..+.+.||+|+||.|++|.+... |+ .||||.+..+.. .+.+|+.+|..|+|+|++++|++..+..
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp----- 184 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQP----- 184 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccch-----
Confidence 4566788999999999999988653 33 599999876543 3558999999999999999999986522
Q ss_pred eEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 106 FLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 106 ~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
.-+|||+++ |+|++-|.. .....|.......++.||+.|+.||.+ +++|||||-..|+|+-. ...|||+|||+.
T Consensus 185 -~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllas-prtVKI~DFGLm 259 (1039)
T KOG0199|consen 185 -AMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLAS-PRTVKICDFGLM 259 (1039)
T ss_pred -hhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecc-cceeeeecccce
Confidence 559999999 688777776 345678888899999999999999999 89999999999999986 778999999999
Q ss_pred cccccCCCcceeec----cccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHH
Q 017139 185 KVLVKGEANISYIC----SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTRE 259 (376)
Q Consensus 185 ~~~~~~~~~~~~~~----t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 259 (376)
+.....+....... ...|.|||.+... .++.++|+|++||++|||++ |..||.+....+.++.+-+...-+
T Consensus 260 RaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~-kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLp--- 335 (1039)
T KOG0199|consen 260 RALGENEDMYVMAPQRKVPFAWCAPESLRHR-KFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLP--- 335 (1039)
T ss_pred eccCCCCcceEecCCCcCcccccCHhHhccc-cccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCC---
Confidence 98876665543322 4469999999765 49999999999999999998 899999999888887665321110
Q ss_pred HHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 260 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
-++..++++.++++.||+.+|.+|||...|...-+...
T Consensus 336 -------------------------RPk~csedIY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 336 -------------------------RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred -------------------------CCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 23457899999999999999999999998865555443
No 392
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.6e-34 Score=300.91 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=182.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeec
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEY 113 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~ 113 (376)
..|...+.||+|+||.||+|++..++..||+|++.........|++.++.++||||+++++++.. ....|+||||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~-----~~~~~lv~Ey 764 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRS-----EKGAYLIHEY 764 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEc-----CCCCEEEEeC
Confidence 34566778999999999999999999999999987665555678999999999999999999843 3447899999
Q ss_pred ccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhH---cCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 114 VPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH---TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 114 ~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
+++ +|.+.+. .+++..+..++.|++.||+||| + .+|+||||||+||+++. +...++. ||.......
T Consensus 765 ~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~-~~iiH~dlkp~Nil~~~-~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 765 IEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCS-PAVVVGNLSPEKIIIDG-KDEPHLR-LSLPGLLCT 834 (968)
T ss_pred CCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCC-CCeecCCCCHHhEEECC-CCceEEE-ecccccccc
Confidence 985 6666653 2788899999999999999999 5 59999999999999986 6666665 665443221
Q ss_pred CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHHHhhcCcCC
Q 017139 190 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA-VDQLVEIIKVLGTPTREEIRCMNPNY 268 (376)
Q Consensus 190 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (376)
.....+++.|+|||++.+. .++.++|||||||++|||++|+.||..... ........+...... ..
T Consensus 835 ---~~~~~~t~~y~aPE~~~~~-~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~------- 901 (968)
T PLN00113 835 ---DTKCFISSAYVAPETRETK-DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC--HL------- 901 (968)
T ss_pred ---CCCccccccccCcccccCC-CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc--ch-------
Confidence 1233678999999998754 489999999999999999999999953211 111111111100000 00
Q ss_pred cCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 269 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
..+.-+.+... ...+.....++.+++.+||+.||++|||+.++++.
T Consensus 902 ~~~~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 902 DMWIDPSIRGD---VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred hheeCccccCC---CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 00000100000 00111123467889999999999999999999754
No 393
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=278.05 Aligned_cols=244 Identities=25% Similarity=0.370 Sum_probs=203.5
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCc---EEEEEEeccc-----ccchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~---~~aiK~~~~~-----~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.-.|.++||.|.||.|++++.+..|+ .||||.++.. +..+..|+.||-+++||||+++.++... ..-
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk-----s~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK-----SKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec-----Cce
Confidence 45788999999999999999887764 6999999643 3445579999999999999999998833 333
Q ss_pred EEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+-||+|||+ |+|..+|+.. .+.|+..++.-+++.|+.|++||-++ ++|||||...|||+|+ +-..|++|||+++
T Consensus 705 vMIiTEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNs-nLvCKVsDFGLSR 779 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNS-NLVCKVSDFGLSR 779 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeecc-ceEEEecccccee
Confidence 789999999 5777777763 35699999999999999999999995 9999999999999997 8899999999999
Q ss_pred ccccCC-Ccceeec---cccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHH
Q 017139 186 VLVKGE-ANISYIC---SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREE 260 (376)
Q Consensus 186 ~~~~~~-~~~~~~~---t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (376)
...++. ...+..| ...|.|||.+.-. +++.+||+||+|+++||.++ |..||-...+.+.+..+.+-..-|+
T Consensus 780 vledd~~~~ytt~GGKIPiRWTAPEAIa~R-KFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPp--- 855 (996)
T KOG0196|consen 780 VLEDDPEAAYTTLGGKIPIRWTAPEAIAYR-KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPP--- 855 (996)
T ss_pred ecccCCCccccccCCccceeecChhHhhhc-ccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCC---
Confidence 876554 2223332 5679999999654 59999999999999999885 9999999999999988876433332
Q ss_pred HhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 261 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
|.+.|..+.+|...||++|-.+||...+|+++
T Consensus 856 -------------------------PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 856 -------------------------PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred -------------------------CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 34678999999999999999999999988753
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=262.99 Aligned_cols=206 Identities=29% Similarity=0.427 Sum_probs=179.1
Q ss_pred CCCCCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchH------------HHHHHHHhCC---CCC
Q 017139 24 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------------RELQLMRLMD---HPN 88 (376)
Q Consensus 24 ~~~~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~------------~e~~~l~~l~---h~~ 88 (376)
.+-.+++...-+|+..+.||.|+||+|++|.++.+...|+||.+.+.+...+ .|+++|..++ |+|
T Consensus 551 ~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~N 630 (772)
T KOG1152|consen 551 IGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHEN 630 (772)
T ss_pred ccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccc
Confidence 3455667777889999999999999999999999999999999877654332 4999999998 999
Q ss_pred eeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCee
Q 017139 89 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 168 (376)
Q Consensus 89 Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nil 168 (376)
|++++++| +++.++||+||.-..++ .|..+......++|.....|+.|+..|+++||+ .||+|||||-+|+.
T Consensus 631 IlKlLdfF-----Eddd~yyl~te~hg~gI--DLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~-~~ivhrdikdenvi 702 (772)
T KOG1152|consen 631 ILKLLDFF-----EDDDYYYLETEVHGEGI--DLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHD-QGIVHRDIKDENVI 702 (772)
T ss_pred hhhhhhee-----ecCCeeEEEecCCCCCc--chhhhhhccCccchHHHHHHHHHHHhccccccc-cCceecccccccEE
Confidence 99999999 88889999999876431 334455567889999999999999999999999 69999999999999
Q ss_pred ecCCCCcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 017139 169 VDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG 239 (376)
Q Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~ 239 (376)
+++ +|.+||+|||.+... ..++...+.||..|.|||++.+..+.+..-|||++|+++|.++....||+.
T Consensus 703 vd~-~g~~klidfgsaa~~-ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 703 VDS-NGFVKLIDFGSAAYT-KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred Eec-CCeEEEeeccchhhh-cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 997 788999999998754 445566889999999999998888779999999999999999999989864
No 395
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=268.94 Aligned_cols=258 Identities=26% Similarity=0.371 Sum_probs=206.9
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc----ccchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.-.++|..+..+|+|.||.||+|+++.+++..|+|+++.. ....++|+-+++..+||||+.+++.|.. ...
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-----~dk 86 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-----RDK 86 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-----hcC
Confidence 3457899999999999999999999999999999998643 3456679999999999999999998843 334
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++|+||||+|+.++.+-+ ..+++++.++..++++.+.+|+|||+ .|-+|||||-.||+++. .+.+|++|||.+-.
T Consensus 87 lwicMEycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd-~gDvklaDfgvsaq 161 (829)
T KOG0576|consen 87 LWICMEYCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTD-EGDVKLADFGVSAQ 161 (829)
T ss_pred cEEEEEecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhc-CCcccccccccceeecc-cCceeecccCchhh
Confidence 889999999754444433 35789999999999999999999999 69999999999999995 88899999998754
Q ss_pred cc-cCCCcceeeccccccChhhh--hCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 187 LV-KGEANISYICSRYYRAPELI--FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 187 ~~-~~~~~~~~~~t~~y~aPE~~--~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
.. .-....+++||++|||||+. .....|...+|+|++|++..|+.--++|-....+...+..+-+..-.|+
T Consensus 162 itati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp------ 235 (829)
T KOG0576|consen 162 ITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPP------ 235 (829)
T ss_pred hhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCC------
Confidence 43 33455689999999999986 2233589999999999999999988888665555544444433211111
Q ss_pred cCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 264 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
.++ =..+.++-+-+|++.+|.++|.+|||++-+|.|||...
T Consensus 236 -----------~lk-------Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 236 -----------TLK-------DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred -----------ccc-------CCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 111 01245778889999999999999999999999999854
No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.6e-33 Score=233.67 Aligned_cols=261 Identities=21% Similarity=0.287 Sum_probs=187.6
Q ss_pred CCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc---chHHHHHHHHhC-CCCCeeecceeeeecCCCC
Q 017139 28 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR---YKNRELQLMRLM-DHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 28 ~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~~ 103 (376)
......+.|.|.+.||+|.||.+.+|+++.+...+++|.+..... .+.+|...--.| .|.||+..+++.+. .
T Consensus 18 ~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFq----t 93 (378)
T KOG1345|consen 18 KKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQ----T 93 (378)
T ss_pred cccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhh----c
Confidence 334456889999999999999999999999999999999876543 233454433333 48999999887653 3
Q ss_pred ceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeee-cCCCCcEEEEec
Q 017139 104 ELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV-DPLTHQVKLCDF 181 (376)
Q Consensus 104 ~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill-~~~~~~~kl~Df 181 (376)
..++.+++||++ |+|.+-+.. ..+.|...+.++.|+++|+.|||+ +++||||||.+|||+ +.+..++|||||
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred CceEEEeeccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEEeeec
Confidence 346889999999 665554443 568899999999999999999999 899999999999998 444568999999
Q ss_pred CCccccccCCCcceeeccccccChhhhhCC----CCCCccchhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCC
Q 017139 182 GSAKVLVKGEANISYICSRYYRAPELIFGA----TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD-QLVEIIKVLGTP 256 (376)
Q Consensus 182 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~~~~~~~~ 256 (376)
|+.+....--.. .--+-.|.+||+.... -...+.+|+|.||+++|.++||.+||+.....+ .+.+..+..+..
T Consensus 168 G~t~k~g~tV~~--~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 168 GLTRKVGTTVKY--LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK 245 (378)
T ss_pred ccccccCceehh--hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc
Confidence 998754322111 1124558899987432 225778999999999999999999997432221 122222221111
Q ss_pred CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCC---CCHHHHhCCCcccc
Q 017139 257 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR---CTALEACAHPFFDE 322 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---~t~~ell~hp~~~~ 322 (376)
.. ..|. .-..+++.+..+.++-|..+|.+| .++......-|...
T Consensus 246 ~~-------------~~P~---------~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 246 NP-------------ALPK---------KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred Cc-------------cCch---------hhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence 10 0000 113578999999999999999999 45555555566543
No 397
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6e-31 Score=259.23 Aligned_cols=244 Identities=25% Similarity=0.381 Sum_probs=189.8
Q ss_pred eEeeeeeccCCceEEEEEEEcC-------CCcEEEEEEeccccc-----chHHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 36 YMAERVVGTGSFGIVFQAKCLE-------TGETVAIKKVLQDRR-----YKNRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~-------~~~~~aiK~~~~~~~-----~~~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
..+.+.||+|+||+|++|.... ....||+|.+..... ....|+++++.+ .|+||+.+.+++..
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~---- 373 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ---- 373 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc----
Confidence 3566799999999999997531 145799998865433 344688999888 59999999998843
Q ss_pred CceeEEEEeeccc-chHHHHHHhhh---hc-------C--CCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeee
Q 017139 103 DELFLNLVMEYVP-ETMYRVLKHYS---SM-------N--QRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 169 (376)
Q Consensus 103 ~~~~~~lv~e~~~-g~l~~~l~~~~---~~-------~--~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill 169 (376)
...+++|+|||. |+|..++++.+ .. . ..++......++.||+.|++||++ .+++||||-..|||+
T Consensus 374 -~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 374 -DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDLAARNVLI 451 (609)
T ss_pred -CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhhhhhhEEe
Confidence 455889999999 78888888755 11 1 238999999999999999999999 799999999999999
Q ss_pred cCCCCcEEEEecCCccccccCCCcce--ee--ccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCC-hH
Q 017139 170 DPLTHQVKLCDFGSAKVLVKGEANIS--YI--CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGEN-AV 243 (376)
Q Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~--~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~-~~ 243 (376)
.. +..+||+|||+++.......... .. -...|||||.+.. ..|+.++||||+|+++||+++ |..||++.. ..
T Consensus 452 ~~-~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~ 529 (609)
T KOG0200|consen 452 TK-NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE 529 (609)
T ss_pred cC-CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence 96 78899999999986544333221 11 1334999999976 559999999999999999998 889998855 33
Q ss_pred HHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 244 DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
+.. +.++..... ..|...+.++.++++.||..+|++||+..++.
T Consensus 530 ~l~-~~l~~G~r~---------------------------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~ 573 (609)
T KOG0200|consen 530 ELL-EFLKEGNRM---------------------------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECV 573 (609)
T ss_pred HHH-HHHhcCCCC---------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence 333 333211111 13346789999999999999999999998875
No 398
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=240.93 Aligned_cols=192 Identities=28% Similarity=0.401 Sum_probs=156.5
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-cchHHHHHHHHh--CCCCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-RYKNRELQLMRL--MDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~e~~~l~~--l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
+...+.+.+|+|.||.||+|.. +++.||||++.... .....|.++.+. ++|+||+++++.--... .....++||
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccceeEE
Confidence 4567789999999999999987 66999999997543 344567777664 58999999877532211 224568899
Q ss_pred eeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC--------CCceeccCCCCCeeecCCCCcEEEEec
Q 017139 111 MEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV--------PGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 111 ~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
++|-+ |+|.++|+. ..+++....+|+..++.||+|||+- ..|+|||||..|||+.. +....|+||
T Consensus 287 t~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~-DlTccIaDF 360 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN-DLTCCIADF 360 (534)
T ss_pred eeeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc-CCcEEeecc
Confidence 99998 799999886 6799999999999999999999973 35999999999999995 889999999
Q ss_pred CCccccccCCC---cceeeccccccChhhhhCCCCCC-----ccchhHHHHHHHHHHHhCC
Q 017139 182 GSAKVLVKGEA---NISYICSRYYRAPELIFGATEYT-----TSIDIWSAGCVLAELLLGQ 234 (376)
Q Consensus 182 g~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~-----~~~DiwslG~il~~lltg~ 234 (376)
|+|........ ....+||..|||||++.+..++. .+.||||+|.++|||++.-
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC 421 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC 421 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99987764332 33578999999999998766555 3689999999999999754
No 399
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-31 Score=236.20 Aligned_cols=270 Identities=24% Similarity=0.329 Sum_probs=189.1
Q ss_pred cCCCCcccceEeeccCCCCCCCccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-ccchHHHHHHHH--hCC
Q 017139 9 QGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMR--LMD 85 (376)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~e~~~l~--~l~ 85 (376)
+|++.+.+-++..+++. +-++.+.+|+|.||.||+|.. -|+.||||+|... +..-.+|.++.+ .|+
T Consensus 195 SGSGSGlplLVQRTiar---------qI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLR 263 (513)
T KOG2052|consen 195 SGSGSGLPLLVQRTIAR---------QIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLR 263 (513)
T ss_pred CCCCCCchhHhHHhhhh---------eeEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhc
Confidence 34444444444555544 488999999999999999998 6789999999653 333345666555 579
Q ss_pred CCCeeecceeeeecCCCCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-------CCc
Q 017139 86 HPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV-------PGV 157 (376)
Q Consensus 86 h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-------~~i 157 (376)
|+||+.+++.=.... ..-..++||++|-+ |+|.++|.. ..++.+...+++..++.||++||.. ..|
T Consensus 264 HENILgFIaaD~~~~-gs~TQLwLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaI 337 (513)
T KOG2052|consen 264 HENILGFIAADNKDN-GSWTQLWLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAI 337 (513)
T ss_pred cchhhhhhhccccCC-CceEEEEEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchh
Confidence 999999887543222 34567899999998 899998876 6688888999999999999999962 248
Q ss_pred eeccCCCCCeeecCCCCcEEEEecCCccccccC-----CCcceeeccccccChhhhhCCCCC-----CccchhHHHHHHH
Q 017139 158 CHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-----EANISYICSRYYRAPELIFGATEY-----TTSIDIWSAGCVL 227 (376)
Q Consensus 158 vH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~-----~~~~DiwslG~il 227 (376)
.|||||..|||+.+ ++...|+|+|+|-...+. ......+||..|||||++....+. -..+||||||.++
T Consensus 338 AHRDlKSKNILVKk-n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl 416 (513)
T KOG2052|consen 338 AHRDLKSKNILVKK-NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL 416 (513)
T ss_pred hccccccccEEEcc-CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence 99999999999996 888999999999765543 234577899999999999653321 2358999999999
Q ss_pred HHHHh----C------CCCCCCCC-hHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHH
Q 017139 228 AELLL----G------QPLFPGEN-AVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDL 296 (376)
Q Consensus 228 ~~llt----g------~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 296 (376)
||++. | ++||.+.- .+...+++.+..... ...+..+ ..|.. ...=..+..+
T Consensus 417 WEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~------~~RP~ip---------nrW~s---~~~l~~m~kl 478 (513)
T KOG2052|consen 417 WEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQ------KLRPNIP---------NRWKS---DPALRVMAKL 478 (513)
T ss_pred HHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeec------ccCCCCC---------ccccc---CHHHHHHHHH
Confidence 99984 2 37886431 111222222211110 0000000 01100 0011346688
Q ss_pred HHhhcCCCCCCCCCHHHH
Q 017139 297 ASRLLQYSPSLRCTALEA 314 (376)
Q Consensus 297 i~~~L~~dP~~R~t~~el 314 (376)
++.||..||.-|.||--+
T Consensus 479 MkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 479 MKECWYANPAARLTALRI 496 (513)
T ss_pred HHHhhcCCchhhhHHHHH
Confidence 999999999999998654
No 400
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=252.77 Aligned_cols=240 Identities=26% Similarity=0.352 Sum_probs=192.8
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCc----EEEEEEeccc-----ccchHHHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGE----TVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~----~~aiK~~~~~-----~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
.+..++||+|+||+||++.....|+ +||||++... .....+|+-.+..++|||++++++++..+.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------ 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------
Confidence 4557899999999999999877665 5888887543 234457889999999999999999884332
Q ss_pred EEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 107 LNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 107 ~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
+-||++|++ |.|+++++. ....+.......|+.||++||.|||. ++++||||-..|+|+.+ -..+||+|||+++
T Consensus 772 ~qlvtq~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~-qrlVHrdLaaRNVLVks-P~hvkitdfgla~ 846 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEE-QRLVHRDLAARNVLVKS-PNHVKITDFGLAK 846 (1177)
T ss_pred HHHHHHhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHh-cchhhhhhhhhheeecC-CCeEEEEecchhh
Confidence 559999999 678888776 34678889999999999999999999 79999999999999996 6679999999999
Q ss_pred ccccCCCcceeec---cccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 186 VLVKGEANISYIC---SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 186 ~~~~~~~~~~~~~---t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
....+.......+ .+-|||-|.+... .|+.++||||+||++||++| |..|+.+....+.-..+.+-
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~~-~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g--------- 916 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRIR-KYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG--------- 916 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhcc-CCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc---------
Confidence 8877665544333 5568898988654 59999999999999999998 99999887655443322220
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
.+ ...|+..+.++.-++.+||..|+..||++.++.
T Consensus 917 -------eR------------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 917 -------ER------------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred -------cc------------CCCCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 00 112345788999999999999999999998864
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1e-29 Score=218.22 Aligned_cols=208 Identities=37% Similarity=0.618 Sum_probs=175.0
Q ss_pred eccCCceEEEEEEEcCCCcEEEEEEeccccc-----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeeccc-
Q 017139 42 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP- 115 (376)
Q Consensus 42 Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~- 115 (376)
||+|++|.||++....+++.+++|++..... ...+|+..++.+.|++|+++++++ ......++++|+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF-----EDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeee-----ecCCeEEEEEecCCC
Confidence 6899999999999988899999999976654 466899999999999999999988 33356889999999
Q ss_pred chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCC-Ccc
Q 017139 116 ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-ANI 194 (376)
Q Consensus 116 g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~-~~~ 194 (376)
++|.+.+... ...++...++.++.+++.+|++||+ .|++|+||+|.||+++..++.++|+|||.+....... ...
T Consensus 76 ~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~ 151 (215)
T cd00180 76 GSLKDLLKEN---EGKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLK 151 (215)
T ss_pred CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhh
Confidence 5776666542 1468899999999999999999999 7999999999999998535789999999987654332 123
Q ss_pred eeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCC
Q 017139 195 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 274 (376)
Q Consensus 195 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (376)
...+...|++||.+......+.++|+|++|++++++
T Consensus 152 ~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------
Confidence 455688899999986543578999999999999999
Q ss_pred CCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCC
Q 017139 275 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 318 (376)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp 318 (376)
..+.+++.+|++.||++||+++++++|+
T Consensus 188 ----------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1456999999999999999999999885
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97 E-value=4.9e-31 Score=269.52 Aligned_cols=206 Identities=17% Similarity=0.180 Sum_probs=145.5
Q ss_pred hCCC-CCeeecceeeeecC--CCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCcee
Q 017139 83 LMDH-PNVISLKHCFFSTT--SKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCH 159 (376)
Q Consensus 83 ~l~h-~~Iv~~~~~~~~~~--~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH 159 (376)
.++| .||+++++.|-... ......+++++|+++++|.+.+.. ....+++..++.++.||+.||.|||+ +||+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~-~gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHS-QGIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHh-CCeee
Confidence 4455 57777777652111 112234678899999998888753 23569999999999999999999999 79999
Q ss_pred ccCCCCCeeecC------------------CCCcEEEEecCCccccccCC-----------------CcceeeccccccC
Q 017139 160 RDVKPQNLLVDP------------------LTHQVKLCDFGSAKVLVKGE-----------------ANISYICSRYYRA 204 (376)
Q Consensus 160 ~dlkp~Nill~~------------------~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~~~t~~y~a 204 (376)
|||||+|||++. .++.+|++|||+++...... ......||++|+|
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999953 13456667777665321100 0012357889999
Q ss_pred hhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccc
Q 017139 205 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKV 284 (376)
Q Consensus 205 PE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (376)
||++.+.. ++.++|||||||++|||++|.+|+.... .....+.... .++ .
T Consensus 184 PE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~~-~------------------------- 233 (793)
T PLN00181 184 PEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LPP-Q------------------------- 233 (793)
T ss_pred hhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cCh-h-------------------------
Confidence 99987654 8999999999999999999988875322 1111111110 000 0
Q ss_pred cccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 285 FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 285 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
. ....+...+++.+||++||.+||++.++++||||...
T Consensus 234 ~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 234 I-LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred h-hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 0 0114456789999999999999999999999999764
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=3.9e-29 Score=217.57 Aligned_cols=200 Identities=34% Similarity=0.594 Sum_probs=166.2
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-----cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
|.+.+.||.|++|.||++.+..+++.+++|.+.... ....+|++.++.++|+|++++++++. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 677899999999999999999889999999987542 34457899999999999999999873 33458899
Q ss_pred eecccc-hHHHHHHhhhhcCCC-CCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 111 MEYVPE-TMYRVLKHYSSMNQR-MPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 111 ~e~~~g-~l~~~l~~~~~~~~~-l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
+|++++ +|.+.+... .. +++..++.++.+++.++.+||+ ++++|+||+|.||+++. ++.++|+|||.+....
T Consensus 76 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~-~~~~~l~d~g~~~~~~ 149 (225)
T smart00221 76 MEYCEGGDLFDYLRKK----GGKLSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGM-DGLVKLADFGLARFIH 149 (225)
T ss_pred EeccCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcC-CCCEEEeeCceeeEec
Confidence 999997 777666542 23 8899999999999999999999 79999999999999996 6889999999988765
Q ss_pred cCC--CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCC-CChHHHH
Q 017139 189 KGE--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG-ENAVDQL 246 (376)
Q Consensus 189 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~-~~~~~~~ 246 (376)
... ......++..|++||.+.+...++.++|+|+||+++++|++|+.||.. .+....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~ 210 (225)
T smart00221 150 RDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLL 210 (225)
T ss_pred CcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHH
Confidence 543 334556788899999884334578899999999999999999999977 4444333
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=1.2e-28 Score=206.69 Aligned_cols=167 Identities=21% Similarity=0.177 Sum_probs=125.5
Q ss_pred chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCcce
Q 017139 116 ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 195 (376)
Q Consensus 116 g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~~~ 195 (376)
|+|.+.+... +..+++..++.++.|++.||.|||+ ++ ||+|||++. ++.+|+ ||.+...... .
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~-~~~~~~--fG~~~~~~~~----~ 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTW-DGLLKL--DGSVAFKTPE----Q 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcC-ccceee--ccceEeeccc----c
Confidence 4666666542 4569999999999999999999999 67 999999986 777888 9998765432 2
Q ss_pred eeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCCHHHHhhcCcCCcCccCC
Q 017139 196 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 274 (376)
Q Consensus 196 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (376)
..|++.|+|||++.+. .++.++|||||||++|+|++|..||...... ..+..+..........
T Consensus 64 ~~g~~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------- 127 (176)
T smart00750 64 SRVDPYFMAPEVIQGQ-SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR--------------- 127 (176)
T ss_pred CCCcccccChHHhcCC-CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcc---------------
Confidence 3678999999999765 4899999999999999999999999765433 2233332211110000
Q ss_pred CCCCCCcccccccCCCh--hHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 275 QIKAHPWHKVFHKRMPP--EAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 275 ~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
....+..++. ++.+++.+||..||.+||++.+++.|+|+..
T Consensus 128 -------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 128 -------DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred -------ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0000112233 6999999999999999999999999999853
No 405
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-27 Score=208.55 Aligned_cols=247 Identities=20% Similarity=0.247 Sum_probs=190.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCC-----cEEEEEEecccccch-----HHHHHHHHhCCCCCeeecceeeeecCCCC
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETG-----ETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~-----~~~aiK~~~~~~~~~-----~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~ 103 (376)
.+++....+-+|.||.||.|..+... +.+.+|.+....... ..|.-++..+.|||+.++.++... +
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie----~ 359 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE----D 359 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee----c
Confidence 57777888999999999999765432 346666665544333 256777778889999999888753 3
Q ss_pred ceeEEEEeeccc-chHHHHHHhhhhc----CCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEE
Q 017139 104 ELFLNLVMEYVP-ETMYRVLKHYSSM----NQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL 178 (376)
Q Consensus 104 ~~~~~lv~e~~~-g~l~~~l~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl 178 (376)
..+.+.++.+.+ |+|..++...+.. .+.++-.++..++.|+..|++|||+ +|++|.||-..|++|+. .-.+||
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd-~LqVkl 437 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDD-QLQVKL 437 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehh-heeEEe
Confidence 444678888888 7887777643321 3456777888999999999999999 79999999999999995 789999
Q ss_pred EecCCccccccCCCc---ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 017139 179 CDFGSAKVLVKGEAN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG 254 (376)
Q Consensus 179 ~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 254 (376)
+|=.+++...+..-+ ...-....||+||.+... .|+.++|+||||+++|||+| |+.|+...++.+...-+.+.
T Consensus 438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~-~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG-- 514 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNS-HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG-- 514 (563)
T ss_pred ccchhccccCcccccccCCCCCCcccccCHHHHhhh-hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc--
Confidence 999998876543321 112224569999999765 49999999999999999998 99999998888776655441
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
+++ ..|-+.|.++..++..||..+|++||+.+++.
T Consensus 515 ----------------yRl----------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 515 ----------------YRL----------AQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred ----------------cee----------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 111 12346899999999999999999999999875
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.2e-28 Score=240.20 Aligned_cols=261 Identities=24% Similarity=0.347 Sum_probs=191.5
Q ss_pred cce-EeeeeeccCCceEEEEEEEcCCCcEEEEEEecc----cccc------hHHHHHHHHhCCCCCeeecceeeeecCCC
Q 017139 34 ISY-MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ----DRRY------KNRELQLMRLMDHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 34 ~~y-~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~----~~~~------~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~ 102 (376)
..| .....+|.|++|.|+.+......+.++.|.+.. .... ...|.-+-..+.|||++.....+....
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-- 394 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-- 394 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc--
Confidence 335 457899999999999988877777777775541 1111 113444556788999988776663221
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
. .+-.||||+++|...+.. ...++...+..++.|++.||+|||+ .||.|||+|++|+++.. ++.+||+|||
T Consensus 395 --~-~~~~mE~~~~Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~-~g~lki~Dfg 465 (601)
T KOG0590|consen 395 --G-ILQSMEYCPYDLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTE-NGILKIIDFG 465 (601)
T ss_pred --c-chhhhhcccHHHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHh-cCceeccCccccEEEec-CCceEEeecC
Confidence 1 334499999977766664 3578888999999999999999999 69999999999999996 7799999999
Q ss_pred CccccccCCC-----cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHhcCCC
Q 017139 183 SAKVLVKGEA-----NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLV-EIIKVLGTP 256 (376)
Q Consensus 183 ~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~-~~~~~~~~~ 256 (376)
.+........ ....+|+..|+|||++.+........||||.|+++..|.+|+.||......+... ....
T Consensus 466 ~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~----- 540 (601)
T KOG0590|consen 466 AASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY----- 540 (601)
T ss_pred cceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-----
Confidence 9876644322 3456789999999999877655667999999999999999999997554332211 0000
Q ss_pred CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 257 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
... ..... -...+...++...+.+|.+||++||.+|+|++++++.+||+.+...
T Consensus 541 ------------~~~--~~~~~--~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 541 ------------SDQ--RNIFE--GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECC 594 (601)
T ss_pred ------------ccc--ccccc--ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceE
Confidence 000 00000 0011234578899999999999999999999999999999987654
No 407
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-28 Score=228.73 Aligned_cols=237 Identities=28% Similarity=0.404 Sum_probs=192.9
Q ss_pred eeccCCceEEEEEEEc---CCCcEEEEEEeccc------ccchHHHHHHHHhCC-CCCeeecceeeeecCCCCceeEEEE
Q 017139 41 VVGTGSFGIVFQAKCL---ETGETVAIKKVLQD------RRYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~---~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
++|.|+||.|+++... ..|..||+|+..+. ......|..++...+ ||++++++..+ +.+..++++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf-----qt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF-----QTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee-----ccccchhHh
Confidence 4799999999987542 45778999987542 223335888888887 99999999988 555558999
Q ss_pred eecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccC
Q 017139 111 MEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 190 (376)
Q Consensus 111 ~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~ 190 (376)
+++..|+ .+.........+.+...+.+...++.+++++|+ .||+|||+|++||+++. +|.+++.|||+++.....
T Consensus 76 ld~~rgg---~lft~l~~~~~f~~~~~~~~~aelaLald~lh~-l~iiyrd~k~enilld~-~Ghi~~tdfglske~v~~ 150 (612)
T KOG0603|consen 76 LDFLRGG---DLFTRLSKEVMFDELDVAFYLAELALALDHLHK-LGIAYRDYKLENVLLLL-EGHIKLTDFGLSKEAVKE 150 (612)
T ss_pred hhhcccc---hhhhccccCCchHHHHHHHHHHHHHHHHhhcch-hHHHHhcccccceeecc-cCccccCCchhhhHhHhh
Confidence 9999975 233334446778899999999999999999999 69999999999999996 888999999999877655
Q ss_pred CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcC
Q 017139 191 EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 270 (376)
Q Consensus 191 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (376)
... +||..|||||++. ....++|.||+|+++++|++|..||.+ +....|.+..
T Consensus 151 ~~~---cgt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~----------------- 203 (612)
T KOG0603|consen 151 KIA---CGTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAE----------------- 203 (612)
T ss_pred hhc---ccchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhc-----------------
Confidence 443 8899999999986 368899999999999999999999987 4555554421
Q ss_pred ccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH-----HHHhCCCccccccCC
Q 017139 271 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA-----LEACAHPFFDELREP 326 (376)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~~~~~~~~ 326 (376)
..+|..++..+++++..++..+|..|... .++++|+||..++|.
T Consensus 204 ------------~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 204 ------------LEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred ------------cCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 11345678899999999999999999854 799999999999887
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.8e-25 Score=203.02 Aligned_cols=251 Identities=20% Similarity=0.191 Sum_probs=188.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCC-cEEEEEEecccc----cchHHHHHHHHhCCC----CCeeecceeeeecCCCCce
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDR----RYKNRELQLMRLMDH----PNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~-~~~aiK~~~~~~----~~~~~e~~~l~~l~h----~~Iv~~~~~~~~~~~~~~~ 105 (376)
+|.+.+.||+|+||.||.|.+..++ +.+|+|...... .....|..+++.+.. +++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 8999999999999999999988775 678999775532 146679999998873 57777766652 3555
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC----CcEEEEec
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT----HQVKLCDF 181 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~----~~~kl~Df 181 (376)
+.|+||+.++.+|.++..... .+.++...+..++.|++.+|++||+ .|++||||||+|+.+.... ..+.|.||
T Consensus 95 ~~~iVM~l~G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 95 FNFIVMSLLGPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred eeEEEEeccCccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 678999999999988776543 5789999999999999999999999 7999999999999997533 56999999
Q ss_pred CCcc--ccccCC--------C-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 017139 182 GSAK--VLVKGE--------A-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 250 (376)
Q Consensus 182 g~~~--~~~~~~--------~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~ 250 (376)
|+++ ...... . .....||..|.++....+.. .+.+.|+||++.++.+++.|..||.+...........
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 9998 321111 1 12355899999999887654 8999999999999999999999997765433332222
Q ss_pred HhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 251 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
+...... ... +....+.++.++...+-..+...+|....+...
T Consensus 251 ~~~~~~~---------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 251 KDPRKLL---------------TDR---------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred HHhhhhc---------------ccc---------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 2110000 000 112245677777777777888999988766543
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=6.4e-26 Score=187.80 Aligned_cols=205 Identities=23% Similarity=0.329 Sum_probs=165.5
Q ss_pred ccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc--cchHHHHHHHHhCCC-CCeeecceeeeecCCCCceeE
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRLMDH-PNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h-~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
...+.|.++++||+|+||.+|.|....+|+.||||.-+... .....|..+.+.+++ ..|..+..+. .+..+-
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~-----~e~~yn 86 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYG-----TEKDYN 86 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhc-----cccccc
Confidence 44567999999999999999999999999999999886654 345579999998875 4555555554 445556
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC--CCCcEEEEecCCcc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP--LTHQVKLCDFGSAK 185 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~--~~~~~kl~Dfg~~~ 185 (376)
.+||+.++.+|.+++.-. ...++...+.-++-|++.-++|+|. ++++||||||+|+|+.- ..+.+.++|||+++
T Consensus 87 vlVMdLLGPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 87 VLVMDLLGPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeeeeccCccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEEEeccchh
Confidence 799999999988877653 3568999999999999999999999 89999999999999853 23579999999998
Q ss_pred ccccCC--------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 017139 186 VLVKGE--------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 245 (376)
Q Consensus 186 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~ 245 (376)
...+.. ......||..|.+--...+.. -+.+.|+-|+|.++..+.-|..||++......
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk 229 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAATK 229 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhhH
Confidence 765432 233567899999877766544 58889999999999989999999998755433
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=4e-25 Score=202.63 Aligned_cols=173 Identities=19% Similarity=0.280 Sum_probs=127.2
Q ss_pred CCccccceEeeeeeccCCceEEEEEEEcC-CCcEEEEEEeccc---------ccchHHHHHHHHhCCCCCeeecceeeee
Q 017139 29 EPKQTISYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQD---------RRYKNRELQLMRLMDHPNVISLKHCFFS 98 (376)
Q Consensus 29 ~~~~~~~y~~~~~Lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~---------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~ 98 (376)
.+...++|.+.+.||+|+||+||+|.+.. +++.+|||++... .....+|+++++.++|+|++..+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 44567889999999999999999999876 6788899986432 12356899999999999998533211
Q ss_pred cCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccC-CCCCeeecCCCCcEE
Q 017139 99 TTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDV-KPQNLLVDPLTHQVK 177 (376)
Q Consensus 99 ~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dl-kp~Nill~~~~~~~k 177 (376)
. ..|+|||||+|..+.... . .. ...++.|++.+|.|||+ +||+|||| ||+|||++. ++.+|
T Consensus 91 -~-----~~~LVmE~~~G~~L~~~~----~---~~---~~~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~-~~~ik 152 (365)
T PRK09188 91 -G-----KDGLVRGWTEGVPLHLAR----P---HG---DPAWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGP-DGEAA 152 (365)
T ss_pred -C-----CcEEEEEccCCCCHHHhC----c---cc---hHHHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcC-CCCEE
Confidence 1 268999999975333221 0 11 14678899999999999 79999999 999999985 67899
Q ss_pred EEecCCccccccCCCc---------ceeeccccccChhhhhCC-----CCCCccchhH
Q 017139 178 LCDFGSAKVLVKGEAN---------ISYICSRYYRAPELIFGA-----TEYTTSIDIW 221 (376)
Q Consensus 178 l~Dfg~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~-----~~~~~~~Diw 221 (376)
|+|||+++........ ....+++.|.|||.+... ...+..+|-|
T Consensus 153 LiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 153 VIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred EEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9999999876543221 234457778899887422 1234456666
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=1.4e-23 Score=192.55 Aligned_cols=260 Identities=35% Similarity=0.504 Sum_probs=194.8
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-------chHHHHHHHHhCCCC-CeeecceeeeecCCCCceeE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-------YKNRELQLMRLMDHP-NVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~e~~~l~~l~h~-~Iv~~~~~~~~~~~~~~~~~ 107 (376)
|.+.+.||.|+||.||++.+. ..+++|.+..... ...+|..++..+.|+ +|+++.+.+ ......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEE
Confidence 788999999999999999987 7889998854432 245788899999988 799999988 333337
Q ss_pred EEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+++++++.+. +...+...... ..+++.....++.|++.++.++|+ .+++|||+||+||+++..+..++++|||.+..
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~ 151 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFGLAKL 151 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence 8999999974 43233221100 379999999999999999999999 79999999999999997333799999999875
Q ss_pred cccCC-------CcceeeccccccChhhhhCC--CCCCccchhHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcC
Q 017139 187 LVKGE-------ANISYICSRYYRAPELIFGA--TEYTTSIDIWSAGCVLAELLLGQPLFPGENA---VDQLVEIIKVLG 254 (376)
Q Consensus 187 ~~~~~-------~~~~~~~t~~y~aPE~~~~~--~~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~~~~~~ 254 (376)
..... ......++..|++||.+.+. ..++...|+||+|++++++++|..||..... .......+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 231 (384)
T COG0515 152 LPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP 231 (384)
T ss_pred cCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC
Confidence 54432 23567889999999999763 4588999999999999999999999887764 333333333322
Q ss_pred CC-CHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccccC
Q 017139 255 TP-TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 325 (376)
Q Consensus 255 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~ 325 (376)
.+ ..... .+. ........+.+++.+++..+|..|.+..+...++|......
T Consensus 232 ~~~~~~~~-----------~~~---------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 283 (384)
T COG0515 232 TPSLASPL-----------SPS---------NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKL 283 (384)
T ss_pred Cccccccc-----------Ccc---------ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccc
Confidence 22 00000 000 00112357899999999999999999999988877765433
No 412
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.93 E-value=7.8e-26 Score=221.05 Aligned_cols=227 Identities=28% Similarity=0.459 Sum_probs=171.0
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEE
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNL 109 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~l 109 (376)
-..-.+|..++.+..|+||.||.++++.+.+.+|+ ++.++...... ++.....|++|
T Consensus 79 ~p~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~lilRn---ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 79 APSESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLILRN---ILTFAGNPFVV------------------- 135 (1205)
T ss_pred CCCccccceeEeeccCCCCceeeeeccccccchhh-cccccchhhhc---cccccCCccee-------------------
Confidence 34456799999999999999999999999999999 45444332221 22222222222
Q ss_pred EeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 110 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 110 v~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
|+=...++. -+.++.. ++.+++|||+ .||+|||+||+|.+|.. -+.+|++|||+.+....
T Consensus 136 ------gDc~tllk~----~g~lPvd--------mvla~Eylh~-ygivhrdlkpdnllIT~-mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 136 ------GDCATLLKN----IGPLPVD--------MVLAVEYLHS-YGIVHRDLKPDNLLITS-MGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred ------chhhhhccc----CCCCcch--------hhHHhHhhcc-CCeecCCCCCCcceeee-cccccccchhhhhhhhh
Confidence 221112222 2334433 2679999999 69999999999999997 78899999999865421
Q ss_pred C----------------CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 017139 190 G----------------EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 253 (376)
Q Consensus 190 ~----------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~ 253 (376)
. -.....+|||.|.|||++..+. |+..+|+|++|+|+|+.+.|..||.+.+.++.+.+++...
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~ 274 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD 274 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence 1 0112457899999999997654 9999999999999999999999999999999988887743
Q ss_pred CCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCC---CHHHHhCCCccccccCC
Q 017139 254 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC---TALEACAHPFFDELREP 326 (376)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~ell~hp~~~~~~~~ 326 (376)
...+.+ ...++++++++|.++|..+|..|. .+-++.+|+||+.++|.
T Consensus 275 i~wpE~--------------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 275 IEWPEE--------------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred cccccc--------------------------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 322211 234789999999999999999996 45688899999999887
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=5.2e-24 Score=184.17 Aligned_cols=206 Identities=21% Similarity=0.327 Sum_probs=168.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecc--cccchHHHHHHHHhCC-CCCeeecceeeeecCCCCceeEEEE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ--DRRYKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~--~~~~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~~~lv 110 (376)
-.|.++++||.|+||..+.+++.-+++.||||.-.. +...+..|....+.|. .++|..++.+- +...+-.+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeec-----cccchhhhh
Confidence 369999999999999999999999999999997643 3345567888888885 67887765443 555566799
Q ss_pred eecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec----CCCCcEEEEecCCccc
Q 017139 111 MEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD----PLTHQVKLCDFGSAKV 186 (376)
Q Consensus 111 ~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~----~~~~~~kl~Dfg~~~~ 186 (376)
+|.++.+|.+++... +..|+...+..++.|++.-++++|+ +.+|+|||||+|+||. .+.+.|.|+|||+|+.
T Consensus 103 idLLGPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 103 IDLLGPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhhCcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 999999998877653 4679999999999999999999999 8999999999999995 3345799999999988
Q ss_pred cccCCC--------cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC---hHHHHHHH
Q 017139 187 LVKGEA--------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEI 249 (376)
Q Consensus 187 ~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~---~~~~~~~~ 249 (376)
..+... ..+..||..||+--..++.. -+.+.|+-|||-+++..+-|..||.+.. ..+.+++|
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence 765433 34667899999987777755 6899999999999999999999998754 34444444
No 414
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=8.5e-25 Score=193.26 Aligned_cols=195 Identities=23% Similarity=0.346 Sum_probs=142.5
Q ss_pred CCCCeeecceeeeec----------------------CCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHH
Q 017139 85 DHPNVISLKHCFFST----------------------TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 142 (376)
Q Consensus 85 ~h~~Iv~~~~~~~~~----------------------~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~ 142 (376)
+|||||.+...|.++ .......+|+||...+.+|..++.. ...+....+-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~-----~~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT-----RHRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc-----CCCchHHHHHHHH
Confidence 599999998877322 2234567899999999888877764 4456666778999
Q ss_pred HHHHHHHHhHcCCCceeccCCCCCeeecCCC---CcEEEEecCCccccccCCC-------cceeeccccccChhhhhCCC
Q 017139 143 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT---HQVKLCDFGSAKVLVKGEA-------NISYICSRYYRAPELIFGAT 212 (376)
Q Consensus 143 qil~aL~~LH~~~~ivH~dlkp~Nill~~~~---~~~kl~Dfg~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~ 212 (376)
|+++|+.|||+ +|+.|||+|.+|||+.-++ -.+.|+|||+|-....... ....-|+..-||||+....+
T Consensus 349 QlLEav~hL~~-hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 349 QLLEAVTHLHK-HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHHHHHH-ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 99999999999 7999999999999984322 2578999999865443211 12334677899999985432
Q ss_pred C-----CCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCccccccc
Q 017139 213 E-----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK 287 (376)
Q Consensus 213 ~-----~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (376)
. .-.++|.|+.|.+.||++....||++......-.. +|.+-..|. +++
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r------------------~Yqe~qLPa---------lp~ 480 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR------------------TYQESQLPA---------LPS 480 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh------------------hhhhhhCCC---------Ccc
Confidence 1 12378999999999999999999987432211000 011112222 556
Q ss_pred CCChhHHHHHHhhcCCCCCCCCCHH
Q 017139 288 RMPPEAIDLASRLLQYSPSLRCTAL 312 (376)
Q Consensus 288 ~~~~~~~~li~~~L~~dP~~R~t~~ 312 (376)
.+++.+++++..+|+.||++|+++.
T Consensus 481 ~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 481 RVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred cCChHHHHHHHHHhcCCccccCCcc
Confidence 8899999999999999999999864
No 415
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.92 E-value=8.6e-25 Score=192.20 Aligned_cols=237 Identities=25% Similarity=0.302 Sum_probs=145.1
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchH-------HHHHHHHhCC----------CCCeeecceeee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMD----------HPNVISLKHCFF 97 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------~e~~~l~~l~----------h~~Iv~~~~~~~ 97 (376)
.+..++.||.|+++.||.|.+..+|+.+|+|++........ +|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 57889999999999999999999999999999854332211 1111111111 111222222211
Q ss_pred ec-------CCCCce-----eEEEEeecccchHHHHHHhhhhcCC---CCCHHHHHHHHHHHHHHHHHhHcCCCceeccC
Q 017139 98 ST-------TSKDEL-----FLNLVMEYVPETMYRVLKHYSSMNQ---RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDV 162 (376)
Q Consensus 98 ~~-------~~~~~~-----~~~lv~e~~~g~l~~~l~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dl 162 (376)
.. ...+.. ..+++|+-+.++|...+........ .+.......+..|++..+++||+ .|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEeccc
Confidence 11 001111 2368888888888777654322222 23344445666899999999999 79999999
Q ss_pred CCCCeeecCCCCcEEEEecCCccccccCCCcceeeccccccChhhhhCC-------CCCCccchhHHHHHHHHHHHhCCC
Q 017139 163 KPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA-------TEYTTSIDIWSAGCVLAELLLGQP 235 (376)
Q Consensus 163 kp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-------~~~~~~~DiwslG~il~~lltg~~ 235 (376)
+|+|++++. +|.++|+||+........... ...+..|.|||..... ..++.+.|.|+||+++|.|.+|..
T Consensus 172 ~~~nfll~~-~G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 172 KPENFLLDQ-DGGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp SGGGEEE-T-TS-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred ceeeEEEcC-CCCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 999999997 788999999977654322111 2335779999987432 236888999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCC
Q 017139 236 LFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 308 (376)
Q Consensus 236 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 308 (376)
||.......... + .+.. .. ++|+.+++||.++|++||.+|
T Consensus 249 Pf~~~~~~~~~~-----------------------~--------~f~~-C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADPE-----------------------W--------DFSR-CR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTSG-----------------------G--------GGTT-SS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCcccccc-----------------------c--------cchh-cC-CcCHHHHHHHHHHccCCcccC
Confidence 997553210000 0 0111 12 579999999999999999988
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.91 E-value=1.2e-24 Score=213.24 Aligned_cols=241 Identities=29% Similarity=0.437 Sum_probs=173.7
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------chH--HHHHHHHhCCCCCeeecceeeeecCCCCcee
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------YKN--RELQLMRLMDHPNVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~--~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~ 106 (376)
+|..++.||++.|=+|.+|++. .| .|+||++.+... ..+ +|++ ...+++||.+.+.... ..+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~-----~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL-----VTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH-----HhhHH
Confidence 6888999999999999999974 34 499999865431 111 2444 5677999999987665 44555
Q ss_pred EEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 107 LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 107 ~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
-|+|-+|...+|++-+.. ..-+.+.+.+.|+.||+.||..+|. .||+|||||.+|||+.+ -+.+.|+||..-+.
T Consensus 96 AylvRqyvkhnLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTS-WNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITS-WNWLYLTDFASFKP 169 (1431)
T ss_pred HHHHHHHHhhhhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEee-echhhhhcccccCC
Confidence 779999998887776654 4567788888999999999999999 69999999999999996 77899999986543
Q ss_pred cc--c-CCCcce-e----eccccccChhhhhCCC----------CCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 017139 187 LV--K-GEANIS-Y----ICSRYYRAPELIFGAT----------EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLV 247 (376)
Q Consensus 187 ~~--~-~~~~~~-~----~~t~~y~aPE~~~~~~----------~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~ 247 (376)
.- + +....+ + ....+|.|||.+.... ..+++.||||+||+++||++ |++||.- .++-
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~ 245 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLL 245 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHH
Confidence 31 1 111111 1 1244699999984411 15778999999999999997 7999941 1111
Q ss_pred HHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 248 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
...... ....+.. +.+--+..++.+|..|++.||++|.+|++.|+-
T Consensus 246 aYr~~~-~~~~e~~-----------------------Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 246 AYRSGN-ADDPEQL-----------------------LEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hHhccC-ccCHHHH-----------------------HHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111100 1111110 111125588999999999999999999999875
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=5.5e-23 Score=173.59 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=103.4
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------------------------------chHHHHHHHHhCCCCC
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------------------------------YKNRELQLMRLMDHPN 88 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------------------------~~~~e~~~l~~l~h~~ 88 (376)
...||+|++|.||+|.+. +|+.||+|++..... ....|...+..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999986 899999999864321 0123888999998877
Q ss_pred eeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHh-HcCCCceeccCCCCCe
Q 017139 89 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI-HTVPGVCHRDVKPQNL 167 (376)
Q Consensus 89 Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~~~ivH~dlkp~Ni 167 (376)
+.....+. ... .+|||||++|+.+.... .....+++..+..++.|++.+|.++ |+ .||+||||||+||
T Consensus 81 v~~p~~~~-----~~~--~~iVmE~i~g~~l~~~~---~~~~~~~~~~~~~i~~qi~~~L~~l~H~-~giiHrDlkP~NI 149 (190)
T cd05147 81 IPCPEPIL-----LKS--HVLVMEFIGDDGWAAPR---LKDAPLSESKARELYLQVIQIMRILYQD-CRLVHADLSEYNL 149 (190)
T ss_pred CCCCcEEE-----ecC--CEEEEEEeCCCCCcchh---hhcCCCCHHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHE
Confidence 74433222 111 36999999975322111 1235789999999999999999999 68 7999999999999
Q ss_pred eecCCCCcEEEEecCCcccc
Q 017139 168 LVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 168 ll~~~~~~~kl~Dfg~~~~~ 187 (376)
+++ ++.++|+|||++...
T Consensus 150 li~--~~~v~LiDFG~a~~~ 167 (190)
T cd05147 150 LYH--DGKLYIIDVSQSVEH 167 (190)
T ss_pred EEE--CCcEEEEEccccccC
Confidence 998 457999999998754
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=1.5e-22 Score=173.00 Aligned_cols=170 Identities=12% Similarity=0.131 Sum_probs=124.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc----cc---------hHHHHHHHHhCCCCCeeecceeeeec
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR----RY---------KNRELQLMRLMDHPNVISLKHCFFST 99 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~---------~~~e~~~l~~l~h~~Iv~~~~~~~~~ 99 (376)
.++|++.++||.|+||.||++.. ++..+|+|.+.... .. .++|+..+.++.|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 46899999999999999999765 46789999985431 11 35788899999999999998886543
Q ss_pred CCC---CceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCc
Q 017139 100 TSK---DELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ 175 (376)
Q Consensus 100 ~~~---~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~ 175 (376)
... .....+++|||++|. |.+. . .+++. .+.+++.+|..||+ .|++|||++|+||+++. ++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~-~-------~~~~~----~~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~-~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDM-P-------EISED----VKAKIKASIESLHQ-HGMVSGDPHKGNFIVSK-NG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHh-h-------hccHH----HHHHHHHHHHHHHH-cCCccCCCChHHEEEeC-CC-
Confidence 211 123478999999984 4332 1 13332 35599999999999 79999999999999986 66
Q ss_pred EEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHH
Q 017139 176 VKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 231 (376)
Q Consensus 176 ~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll 231 (376)
++|+|||............. +.... .++.++|+||||+++..+.
T Consensus 173 i~liDfg~~~~~~e~~a~d~-----------~vler-~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAKDR-----------IDLER-HYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhHHH-----------HHHHh-HhcccccccceeEeehHHH
Confidence 99999998865432221111 22333 3668899999999877544
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=3.2e-21 Score=161.29 Aligned_cols=181 Identities=17% Similarity=0.100 Sum_probs=132.1
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc--------chHHHHHHHHhCC-CCCeeecceeeeecCCCCceeE
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMD-HPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--------~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.++..|++|+||+|+.+.. .+..++.+.+..... ...+|+++|+++. |+++.+++++. . .
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~-----~----~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD-----G----R 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----C----E
Confidence 4678999999999998765 677888777755432 3568999999995 47788876641 1 6
Q ss_pred EEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccC-CCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDV-KPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dl-kp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|++|||+.|..+.... +.. ...++.|++.+|+++|+ +||+|||| ||+|||++. ++.++|+|||++..
T Consensus 74 ~lvmeyI~G~~L~~~~---------~~~-~~~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~-~g~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQRP---------PRG-DLAYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQE-DGSPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhhh---------hhh-hHHHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcC-CCCEEEEECCCcee
Confidence 7999999985322111 001 13467899999999999 79999999 799999986 77899999999985
Q ss_pred cccCCCc--------------ceeeccccccChhhhhCCCCCC-ccchhHHHHHHHHHHHhCCCCCCCC
Q 017139 187 LVKGEAN--------------ISYICSRYYRAPELIFGATEYT-TSIDIWSAGCVLAELLLGQPLFPGE 240 (376)
Q Consensus 187 ~~~~~~~--------------~~~~~t~~y~aPE~~~~~~~~~-~~~DiwslG~il~~lltg~~pf~~~ 240 (376)
....... .....++.|++|+...--...+ ...++++.|+-+|.++|+..|+-+.
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 5433311 0112377788888653222233 5678999999999999999887554
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=2.4e-21 Score=164.12 Aligned_cols=137 Identities=17% Similarity=0.193 Sum_probs=105.7
Q ss_pred eeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc------------------------------chHHHHHHHHhCCCC
Q 017139 38 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR------------------------------YKNRELQLMRLMDHP 87 (376)
Q Consensus 38 ~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------------------------~~~~e~~~l~~l~h~ 87 (376)
+.+.||+|++|.||+|.+. +|+.||||++..... ....|...+.++.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 899999999865421 113578888899998
Q ss_pred CeeecceeeeecCCCCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 88 NVISLKHCFFSTTSKDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 88 ~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
++.....+... . .|+||||++|+ +...... ...+++..+..++.|++.+|.+||+..||+||||||+|
T Consensus 80 ~i~~p~~~~~~-----~--~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~N 148 (190)
T cd05145 80 GVPVPEPILLK-----K--NVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYN 148 (190)
T ss_pred CCCCceEEEec-----C--CEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhh
Confidence 87554433311 1 36999999975 2222111 24578888999999999999999982399999999999
Q ss_pred eeecCCCCcEEEEecCCccccc
Q 017139 167 LLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~~~ 188 (376)
|+++ ++.++|+|||++....
T Consensus 149 Ill~--~~~~~liDFG~a~~~~ 168 (190)
T cd05145 149 ILYH--DGKPYIIDVSQAVELD 168 (190)
T ss_pred EEEE--CCCEEEEEcccceecC
Confidence 9998 5679999999997653
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=2.6e-20 Score=185.69 Aligned_cols=194 Identities=23% Similarity=0.343 Sum_probs=150.0
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHhCC---CCCeeecceeeeecCCCCce
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-YKNRELQLMRLMD---HPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~e~~~l~~l~---h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+...+.|.|.+.||+|+||+||+|.... |+.||+|+-..... ...-=.+++.+|+ -+-|..+..++...+.
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~---- 768 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA---- 768 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCc----
Confidence 3455789999999999999999999877 99999998765432 1111234455555 2344555444432222
Q ss_pred eEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeec------CCCCcEEE
Q 017139 106 FLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD------PLTHQVKL 178 (376)
Q Consensus 106 ~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~------~~~~~~kl 178 (376)
-++|+||.+ |+|++++. ....+++..+..++.|++..++.||. .+|||+||||+|+||. .+...++|
T Consensus 769 -S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~-~~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 769 -SVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHA-MGIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred -ceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHh-cceecccCCcceeEeecccCCCCcccceEE
Confidence 459999999 78888776 46779999999999999999999999 6999999999999994 22346999
Q ss_pred EecCCccccccCC---CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCC
Q 017139 179 CDFGSAKVLVKGE---ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQP 235 (376)
Q Consensus 179 ~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~ 235 (376)
+|||.+.-+.-.. .....+.|..+-++|...|.. |+...|.|.|+.+++.|+.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grp-WtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRP-WTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCC-CchhhhhHHHHHHHHHHHHHHH
Confidence 9999987654332 334556788999999997765 9999999999999999999973
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.83 E-value=1.1e-19 Score=154.79 Aligned_cols=135 Identities=17% Similarity=0.235 Sum_probs=101.2
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc----ccchHHHHHHHHhC-----CCCCeeecceeeeecCCCCcee-
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLM-----DHPNVISLKHCFFSTTSKDELF- 106 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~e~~~l~~l-----~h~~Iv~~~~~~~~~~~~~~~~- 106 (376)
.-.+.||+|+||.||. +..++.. +||++... .....+|+.+++.+ .||||+++++++.+.. +...
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEE
Confidence 3357899999999995 6666666 69988643 23456899999999 5799999999985532 2234
Q ss_pred EEEEeeccc---chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHH-HHhHcCCCceeccCCCCCeeecCC---CCcEEEE
Q 017139 107 LNLVMEYVP---ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL-AYIHTVPGVCHRDVKPQNLLVDPL---THQVKLC 179 (376)
Q Consensus 107 ~~lv~e~~~---g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL-~~LH~~~~ivH~dlkp~Nill~~~---~~~~kl~ 179 (376)
+.+|+||++ ++|.+.+.. ..+++. ..++.|++.++ +|||+ ++|+||||||+|||++.. +..++|+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 347899955 577777754 235555 35677888888 99999 799999999999999742 3479999
Q ss_pred ecCCc
Q 017139 180 DFGSA 184 (376)
Q Consensus 180 Dfg~~ 184 (376)
||+.+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95544
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.4e-20 Score=158.89 Aligned_cols=239 Identities=17% Similarity=0.243 Sum_probs=177.8
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
.+..+.-+|.+...|..|+++. .|..+++|++.-. .+.+..|.-.|+.+.||||+.+++.+- ....+
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn-----sppnl 262 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN-----SPPNL 262 (448)
T ss_pred hhhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-----CCCCc
Confidence 4556677899999999999998 4556777876422 344557888899999999999999883 33447
Q ss_pred EEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceec-cCCCCCeeecCCCCcEEEE--ecCC
Q 017139 108 NLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHR-DVKPQNLLVDPLTHQVKLC--DFGS 183 (376)
Q Consensus 108 ~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~-dlkp~Nill~~~~~~~kl~--Dfg~ 183 (376)
.++..|++ |+|+..+.... +-..+..+..+++.+++.|+.|||++..++-| -|....+++|. +.+.+|. |--+
T Consensus 263 v~isq~mp~gslynvlhe~t--~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmide-dltarismad~kf 339 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE-DLTARISMADTKF 339 (448)
T ss_pred eEeeeeccchHHHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc-hhhhheeccccee
Confidence 89999999 78888887532 34466677888999999999999997666655 58888999985 6555544 3322
Q ss_pred ccccccCCCcceeeccccccChhhhhCCCCC--CccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 184 AKVLVKGEANISYICSRYYRAPELIFGATEY--TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 184 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~--~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
+.. .....-.|.|++||.+...+.. -.++|+|||++++|||.|...||..-.+.+.-.++.-
T Consensus 340 sfq------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial---------- 403 (448)
T KOG0195|consen 340 SFQ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL---------- 403 (448)
T ss_pred eee------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh----------
Confidence 211 1123347889999999654432 3478999999999999999999988776654433321
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHh
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 315 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 315 (376)
+.+...+|+++++.+..|++-|+.-||.+||..+.++
T Consensus 404 -----------------eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 404 -----------------EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred -----------------ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1223346778999999999999999999999887653
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=7.5e-20 Score=159.70 Aligned_cols=140 Identities=16% Similarity=0.133 Sum_probs=105.4
Q ss_pred ceEeeeeeccCCceEEEEEE-EcCCCcEEEEEEeccccc----------------------------chHHHHHHHHhCC
Q 017139 35 SYMAERVVGTGSFGIVFQAK-CLETGETVAIKKVLQDRR----------------------------YKNRELQLMRLMD 85 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~----------------------------~~~~e~~~l~~l~ 85 (376)
-|.+.+.||+|++|.||+|. +..+|+.||+|++..... ....|..+++.+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 677899999998864321 1246888898887
Q ss_pred CCCeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCC-ceeccCCC
Q 017139 86 HPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG-VCHRDVKP 164 (376)
Q Consensus 86 h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~-ivH~dlkp 164 (376)
+. .+.+...+.. . ..++||||++|..+.... .....+....+..++.|++.+|.+||+ +| ++||||||
T Consensus 109 ~~-~i~~p~~~~~---~---~~~lV~E~~~g~~L~~~~---~~~~~~~~~~~~~i~~qi~~~l~~LH~-~g~iiH~Dikp 177 (237)
T smart00090 109 EA-GVPVPKPIAW---R---RNVLVMEFIGGDGLPAPR---LKDVEPEEEEEFELYDDILEEMRKLYK-EGELVHGDLSE 177 (237)
T ss_pred hc-CCCCCeeeEe---c---CceEEEEEecCCcccccc---cccCCcchHHHHHHHHHHHHHHHHHHh-cCCEEeCCCCh
Confidence 53 3333333311 1 146999999984322211 123446666778999999999999999 79 99999999
Q ss_pred CCeeecCCCCcEEEEecCCcccc
Q 017139 165 QNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 165 ~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+||+++ ++.++|+|||.+...
T Consensus 178 ~NIli~--~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH--DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE--CCCEEEEEChhhhcc
Confidence 999998 567999999998653
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=2.5e-20 Score=171.27 Aligned_cols=179 Identities=30% Similarity=0.455 Sum_probs=131.7
Q ss_pred ceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 104 ELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 104 ~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
..++||.|+.|.- +|.+.+ .........+......++.|+..|++| +|.+|+|+||.||++.. +..+||.|||
T Consensus 328 ~~~lyI~Mn~c~~~tledWl-~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~-d~q~kIgDFg 401 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWL-RRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSD-DDQLKIGDFG 401 (516)
T ss_pred ccchhhhhhhhhhhhHHHHh-hCCCcccccchhHHHHHHHhhccchhh----ccchhhhcccccccccc-chhhhhhhhh
Confidence 3468899999995 444444 334445667777888999999999999 48999999999999985 6689999999
Q ss_pred CccccccCC-------CcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 017139 183 SAKVLVKGE-------ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLG 254 (376)
Q Consensus 183 ~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~~~~~~ 254 (376)
+........ ..+...||.+||+||.+.+.. |+.++||||||+|++|++. =...|..... +..+.. |
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~-y~~kvdIyaLGlil~EL~~~f~T~~er~~t---~~d~r~--g 475 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ-YSEKVDIYALGLILAELLIQFSTQFERIAT---LTDIRD--G 475 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhh-hhhhcchhhHHHHHHHHHHHhccHHHHHHh---hhhhhc--C
Confidence 988776655 456778999999999998765 9999999999999999997 2222211111 111100 1
Q ss_pred CCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcc
Q 017139 255 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 320 (376)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~ 320 (376)
..++. +..+ .++-.+|+.+||...|.+||++.+.-.|+|.
T Consensus 476 ~ip~~-------------------------~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 476 IIPPE-------------------------FLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred CCChH-------------------------Hhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 11111 1111 3455699999999999999988887777775
No 426
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=1.3e-18 Score=162.73 Aligned_cols=203 Identities=27% Similarity=0.398 Sum_probs=148.7
Q ss_pred HHhCCCCCeeecceeeeecCCCCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCc-e
Q 017139 81 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGV-C 158 (376)
Q Consensus 81 l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~i-v 158 (376)
|+.+.|.|+.++++..+.. ...++|.+||. |+|.+.+.. ....++......++.+|+.||.|||.. .| .
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s-~i~~ 71 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNS-PIGY 71 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcC-ccee
Confidence 3568899999999998655 34889999999 677777765 456788888999999999999999984 55 9
Q ss_pred eccCCCCCeeecCCCCcEEEEecCCccccccC---CCcceeeccccccChhhhhCCCC------CCccchhHHHHHHHHH
Q 017139 159 HRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG---EANISYICSRYYRAPELIFGATE------YTTSIDIWSAGCVLAE 229 (376)
Q Consensus 159 H~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~------~~~~~DiwslG~il~~ 229 (376)
|+.|+..|++++. ...+||+|||+....... .......-..-|.|||.+..... .+.+.|+||+|++++|
T Consensus 72 hg~l~s~nClvd~-~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~e 150 (484)
T KOG1023|consen 72 HGALKSSNCLVDS-RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYE 150 (484)
T ss_pred eeeeccccceeee-eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHH
Confidence 9999999999996 899999999998766421 11112223556999999865311 3667999999999999
Q ss_pred HHhCCCCCCCCChH----HHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCC
Q 017139 230 LLLGQPLFPGENAV----DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP 305 (376)
Q Consensus 230 lltg~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 305 (376)
+++...||...... +....+.+....+.+..+.. ....++++..++..||.-+|
T Consensus 151 i~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~----------------------~~e~~~~l~~l~~~cw~e~P 208 (484)
T KOG1023|consen 151 ILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIEL----------------------LNELPPELLLLVARCWEEIP 208 (484)
T ss_pred HHhccCccccccccCChHHHHHHHHhcCCCCcCcchhh----------------------hhhcchHHHHHHHHhcccCh
Confidence 99999999763322 22222222011111111100 01345689999999999999
Q ss_pred CCCCCHHHHh
Q 017139 306 SLRCTALEAC 315 (376)
Q Consensus 306 ~~R~t~~ell 315 (376)
.+||+++++-
T Consensus 209 ~~rPs~~~i~ 218 (484)
T KOG1023|consen 209 EKRPSIEQIR 218 (484)
T ss_pred hhCccHHHHH
Confidence 9999998874
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=2.3e-19 Score=175.31 Aligned_cols=256 Identities=23% Similarity=0.321 Sum_probs=191.3
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCC-CcEEEEEEecccc---c---chHHHHHHHHhCC-CCCeeecceeeeecCCCCc
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLET-GETVAIKKVLQDR---R---YKNRELQLMRLMD-HPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~-~~~~aiK~~~~~~---~---~~~~e~~~l~~l~-h~~Iv~~~~~~~~~~~~~~ 104 (376)
...|.+.+.||+|+|+.|-.+....+ ...+|.|.+.... . ....|..+-+.+. |+|++.+++.. .+.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~-----~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS-----SSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc-----CCC
Confidence 34688999999999999988876443 3456666654332 1 1224666766776 99999998877 556
Q ss_pred eeEEEEeecccch-HHHHHHhhhhcCC-CCCHHHHHHHHHHHHHHHHHhH-cCCCceeccCCCCCeeecCCCC-cEEEEe
Q 017139 105 LFLNLVMEYVPET-MYRVLKHYSSMNQ-RMPLIYVKLYTYQIFRGLAYIH-TVPGVCHRDVKPQNLLVDPLTH-QVKLCD 180 (376)
Q Consensus 105 ~~~~lv~e~~~g~-l~~~l~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH-~~~~ivH~dlkp~Nill~~~~~-~~kl~D 180 (376)
.+.+++++|..|+ +..-+. .... ..+......++.|+..++.|+| . .++.|+|+||+|.+++. .+ .+++.|
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~---~~~~~~~~~~~~~~~~~ql~s~l~~~H~~-~~~~h~~ikP~n~~l~~-s~~~l~~~d 168 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKIS---HPDSTGTSSSSASRYLPQLNSGLSYLHPE-NGVTHRDIKPSNSLLDE-SGSALKIAD 168 (601)
T ss_pred cccccccCcccccccccccc---cCCccCCCCcchhhhhhhhccCccccCcc-cccccCCCCCccchhcc-CCCcccCCC
Confidence 6688999998764 222221 1222 5667778889999999999999 8 79999999999999996 55 899999
Q ss_pred cCCcccccc-CCC---cceeec-cccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Q 017139 181 FGSAKVLVK-GEA---NISYIC-SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 255 (376)
Q Consensus 181 fg~~~~~~~-~~~---~~~~~~-t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~ 255 (376)
||+|..... ... ....+| ++.|+|||...+.....+..|+||+|+++..+++|..|+......+....
T Consensus 169 f~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~------- 241 (601)
T KOG0590|consen 169 FGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS------- 241 (601)
T ss_pred chhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce-------
Confidence 999987765 332 234567 99999999997755578999999999999999999999865543321100
Q ss_pred CCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 256 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
.+... ........+..++....+++.++|..+|+.|.+.+++-.+||+..
T Consensus 242 ----------------~~~~~-~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 242 ----------------SWKSN-KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ----------------eeccc-ccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 00000 011223345678999999999999999999999999999999988
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=3.1e-17 Score=141.57 Aligned_cols=129 Identities=20% Similarity=0.314 Sum_probs=101.1
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc------------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
+.||+|++|.||+|.. .|..+++|+..... ....+|+.++..+.|++|.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999987 77789999764321 1234688899999999887766655332 236
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+++|||++| +|.+.+... .. ....++.+++.+|.+||+ .|++|+|++|.||+++ ++.++|+|||.+..
T Consensus 75 ~lv~e~~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~--~~~~~liDf~~a~~ 143 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS--GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEEEeCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE--CCCEEEEECCcccC
Confidence 799999987 555554321 11 677899999999999999 7999999999999998 56799999999875
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.73 E-value=1.9e-17 Score=141.32 Aligned_cols=132 Identities=18% Similarity=0.158 Sum_probs=99.0
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc--------------------------cchHHHHHHHHhCCCCC
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------------------------RYKNRELQLMRLMDHPN 88 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------------------~~~~~e~~~l~~l~h~~ 88 (376)
.|.+.+.||+|+||.||++... +|+.+|||++.... .....|..++..+.+++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3888999999999999999864 79999999865322 01345777888887764
Q ss_pred e--eecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 89 V--ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 89 I--v~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
+ ...++ . ...++||||++|..+..+.. ......++.+++.++.++|+ .|++|+||+|+|
T Consensus 95 i~v~~~~~----~-----~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~-~gi~H~Dl~p~N 155 (198)
T cd05144 95 FPVPKPID----W-----NRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYK-HGIIHGDLSEFN 155 (198)
T ss_pred CCCCceee----c-----CCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHH-CCCCcCCCCccc
Confidence 3 22221 1 12579999999843322211 02356788899999999999 799999999999
Q ss_pred eeecCCCCcEEEEecCCcccc
Q 017139 167 LLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+++. ++.++|+|||.+...
T Consensus 156 ill~~-~~~~~liDfg~~~~~ 175 (198)
T cd05144 156 ILVDD-DEKIYIIDWPQMVST 175 (198)
T ss_pred EEEcC-CCcEEEEECCccccC
Confidence 99996 788999999998654
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=1.4e-16 Score=136.25 Aligned_cols=125 Identities=21% Similarity=0.317 Sum_probs=93.9
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEecccc------------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEE
Q 017139 41 VVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~ 108 (376)
.||+|++|.||++.. +|..+++|...... ....+|.++++.+.|+++....-++.... ..+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-----NKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-----CCE
Confidence 379999999999984 67889999864321 12236889999998887655444433221 257
Q ss_pred EEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 109 LVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 109 lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+||||++| ++.+.+.. .. . .++.+++.+|.+||+ .|++|+|++|.||+++ ++.++++|||++..
T Consensus 74 lv~e~~~g~~l~~~~~~----~~-~------~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~--~~~~~liDfg~a~~ 138 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEE----GN-D------ELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR--DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEECCccHHHHHhh----cH-H------HHHHHHHHHHHHHHH-CCeecCCCCcceEEEE--CCcEEEEECCCCcC
Confidence 99999987 44444322 11 0 678899999999999 7999999999999998 56799999999875
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=3.1e-16 Score=153.63 Aligned_cols=133 Identities=20% Similarity=0.251 Sum_probs=99.7
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------------ccchHHHHHHHHhCCCCCeeecceeeeecC
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------------RRYKNRELQLMRLMDHPNVISLKHCFFSTT 100 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~ 100 (376)
...|...+.||+|+||.||++.... ..+++|+.... .....+|+++++.++|++++....+....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~- 408 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP- 408 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC-
Confidence 3455678899999999999998743 34454443211 01234699999999999988766554332
Q ss_pred CCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEE
Q 017139 101 SKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLC 179 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~ 179 (376)
...++||||++| +|.+.+. ....++.+++.+|.+||+ .|++||||||+||+++ ++.++|+
T Consensus 409 ----~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl~--~~~~~li 469 (535)
T PRK09605 409 ----EEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIVR--DDRLYLI 469 (535)
T ss_pred ----CCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHh-CCCccCCCChHHEEEE--CCcEEEE
Confidence 225799999987 5544443 245788999999999999 7999999999999994 6679999
Q ss_pred ecCCcccc
Q 017139 180 DFGSAKVL 187 (376)
Q Consensus 180 Dfg~~~~~ 187 (376)
|||+++..
T Consensus 470 DFGla~~~ 477 (535)
T PRK09605 470 DFGLGKYS 477 (535)
T ss_pred eCcccccC
Confidence 99998753
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.66 E-value=6e-16 Score=130.87 Aligned_cols=131 Identities=24% Similarity=0.207 Sum_probs=90.6
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecccccch----------------------------HHHHHHHHhCCCCC--
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK----------------------------NRELQLMRLMDHPN-- 88 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~e~~~l~~l~h~~-- 88 (376)
.+.||+|+||+||+|.+. +|+.||||++....... ..|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999976 89999999886532111 12334444443322
Q ss_pred eeecceeeeecCCCCceeEEEEeecccchH-H-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 89 VISLKHCFFSTTSKDELFLNLVMEYVPETM-Y-RVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 89 Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l-~-~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
+.+.+.+ ...++||||++|+. . ..+.... . ...++.++.+++.++.++|...||+|+||||+|
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~N 145 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYN 145 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhh
Confidence 2222211 11579999999721 1 1122111 1 155788999999999999983499999999999
Q ss_pred eeecCCCCcEEEEecCCcccc
Q 017139 167 LLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~~ 187 (376)
|+++ ++.++|+|||.+...
T Consensus 146 ili~--~~~~~liDfg~a~~~ 164 (187)
T cd05119 146 ILVD--DGKVYIIDVPQAVEI 164 (187)
T ss_pred EEEE--CCcEEEEECcccccc
Confidence 9998 667999999998654
No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64 E-value=3.2e-16 Score=146.94 Aligned_cols=252 Identities=24% Similarity=0.249 Sum_probs=190.9
Q ss_pred ccccceEeeeeecc--CCceEEEEEEE--cCCCcEEEEEEecc------cccchHHHHHHHHhC-CCCCeeecceeeeec
Q 017139 31 KQTISYMAERVVGT--GSFGIVFQAKC--LETGETVAIKKVLQ------DRRYKNRELQLMRLM-DHPNVISLKHCFFST 99 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~--G~~g~V~~~~~--~~~~~~~aiK~~~~------~~~~~~~e~~~l~~l-~h~~Iv~~~~~~~~~ 99 (376)
.....+.+.+.+|. |.+|.||.+.+ ..++..+|+|.-.. ......+|+.-.+.+ .|++.++.+..+
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~--- 187 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW--- 187 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc---
Confidence 34456777889999 99999999999 88899999997322 223334566665555 488888866666
Q ss_pred CCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHH----HHHHhHcCCCceeccCCCCCeeecCCCCc
Q 017139 100 TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR----GLAYIHTVPGVCHRDVKPQNLLVDPLTHQ 175 (376)
Q Consensus 100 ~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~----aL~~LH~~~~ivH~dlkp~Nill~~~~~~ 175 (376)
++...+|+-+|+|+.++...... ....+++..++.++.+... ||.++|+ .+++|-|+||.||++..+...
T Consensus 188 --e~~~~lfiqtE~~~~sl~~~~~~---~~~~~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 188 --EGSGILFIQTELCGESLQSYCHT---PCNFLPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred --ccCCcceeeeccccchhHHhhhc---ccccCCchhhhhHHhhhhhcccccccccCC-Ccccccccchhheecccccce
Confidence 66667899999999765554433 3455888999999999999 9999999 799999999999999874378
Q ss_pred EEEEecCCccccccCCCcc-e-----eeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCC--ChHHHHH
Q 017139 176 VKLCDFGSAKVLVKGEANI-S-----YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE--NAVDQLV 247 (376)
Q Consensus 176 ~kl~Dfg~~~~~~~~~~~~-~-----~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~--~~~~~~~ 247 (376)
.+++|||+.....+..... . ..+..-|++||+..+ -++...|++++|.++.+..+|..++... +.+.++.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 9999999988776554222 1 145667999999854 4799999999999999999987666544 3333222
Q ss_pred HHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 248 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
.+. .-..+-...+.++...+..|++.+|-.|++++.+++|+++...
T Consensus 340 ~~~------------------------------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 340 QGY------------------------------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred ccc------------------------------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 211 0111223456777789999999999999999999999998753
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.62 E-value=6.6e-15 Score=128.85 Aligned_cols=134 Identities=18% Similarity=0.233 Sum_probs=95.9
Q ss_pred eeeec-cCCceEEEEEEEcCCCcEEEEEEecccc-----------------cchHHHHHHHHhCCCCCe--eecceeeee
Q 017139 39 ERVVG-TGSFGIVFQAKCLETGETVAIKKVLQDR-----------------RYKNRELQLMRLMDHPNV--ISLKHCFFS 98 (376)
Q Consensus 39 ~~~Lg-~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----------------~~~~~e~~~l~~l~h~~I--v~~~~~~~~ 98 (376)
...|| .|+.|+||.+.. .+..++||.+.... ....+|+.++..+.|++| +..+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 34677 888899998876 47789999774211 123469999999998875 444444322
Q ss_pred cCCCCceeEEEEeecccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcE
Q 017139 99 TTSKDELFLNLVMEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQV 176 (376)
Q Consensus 99 ~~~~~~~~~~lv~e~~~g--~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~ 176 (376)
.. ......++|||+++| +|...+.. ..+++.. +.||+.+|.+||+ +||+|+||||+|||++. ++.+
T Consensus 114 ~~-~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~~----~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~-~~~v 181 (239)
T PRK01723 114 RH-GLFYRADILIERIEGARDLVALLQE-----APLSEEQ----WQAIGQLIARFHD-AGVYHADLNAHNILLDP-DGKF 181 (239)
T ss_pred ec-CcceeeeEEEEecCCCCCHHHHHhc-----CCCCHHH----HHHHHHHHHHHHH-CCCCCCCCCchhEEEcC-CCCE
Confidence 11 111123599999996 55555432 3455543 4689999999999 79999999999999986 6689
Q ss_pred EEEecCCccc
Q 017139 177 KLCDFGSAKV 186 (376)
Q Consensus 177 kl~Dfg~~~~ 186 (376)
+|+|||.+..
T Consensus 182 ~LIDfg~~~~ 191 (239)
T PRK01723 182 WLIDFDRGEL 191 (239)
T ss_pred EEEECCCccc
Confidence 9999998875
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.60 E-value=7e-15 Score=119.42 Aligned_cols=131 Identities=19% Similarity=0.248 Sum_probs=102.5
Q ss_pred eeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc--chHHHHHHHHhCCC--CCeeecceeeeecCCCCceeEEEEeec
Q 017139 38 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--YKNRELQLMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEY 113 (376)
Q Consensus 38 ~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~e~~~l~~l~h--~~Iv~~~~~~~~~~~~~~~~~~lv~e~ 113 (376)
+++.||.|.++.||++.... ..+++|....... ...+|...++.+.+ .++.+++..+ ......+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEEEe
Confidence 46789999999999999743 7899998866543 46679999999976 4777776655 333457899999
Q ss_pred ccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC--CCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 114 VPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV--PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 114 ~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+.|.....+ +......++.+++.+|..||.. .+++|+|++|+||+++. ++.++++|||.+..
T Consensus 75 ~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD-GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC-CcEEEEEecccccC
Confidence 987422111 4455667888999999999984 26999999999999996 78899999998864
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.59 E-value=6e-16 Score=152.53 Aligned_cols=263 Identities=24% Similarity=0.267 Sum_probs=191.7
Q ss_pred cccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc-------cchHHHHHHHHhCCCCCeeecceeeeecCCCCc
Q 017139 32 QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 32 ~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~ 104 (376)
..+.+.+.+.+-+|+++.++.+.-..+|-..++|...... .....+..++-...+|.++.....+ ...
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCC
Confidence 5577888999999999999999888888667776543221 2222333443344556666543332 122
Q ss_pred eeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCC
Q 017139 105 LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 183 (376)
Q Consensus 105 ~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~ 183 (376)
.-.+++++|.++ ++...+.. .+..+++..+..+..+..++++||. ..+.|+|++|.|++... ++..+++|||.
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~----~~~~saepaRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~-~gh~~l~~~~t 950 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHN----SGCLSAEPARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAY-DGHRPLTDFGT 950 (1205)
T ss_pred CCcchhhHHhccCCchhhhhc----CCCcccccccchhHHHHhhhhcccc-chhhcccccccchhhcc-cCCcccCcccc
Confidence 226799999975 55555543 3456777788888899999999999 57999999999999986 77899999984
Q ss_pred cccccc---------------------C-----------CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHH
Q 017139 184 AKVLVK---------------------G-----------EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 231 (376)
Q Consensus 184 ~~~~~~---------------------~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll 231 (376)
...... . .......+|+-|.+||...+.. .+..+|+|++|+++++.+
T Consensus 951 ~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 951 LSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred ccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhh
Confidence 321100 0 0112346799999999998765 789999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCH
Q 017139 232 LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 311 (376)
Q Consensus 232 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 311 (376)
+|.+||...........+.......+ . -+...+.++++++.++|..+|.+|..+
T Consensus 1030 ~g~pp~na~tpq~~f~ni~~~~~~~p-------------------------~-g~~~~s~~aq~~~~~ll~~~~~qr~~a 1083 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQIFENILNRDIPWP-------------------------E-GPEEGSYEAQDLINRLLTEEPTQRLGA 1083 (1205)
T ss_pred cCCCCCCCcchhhhhhccccCCCCCC-------------------------C-CccccChhhhhhhhhhhccCchhccCc
Confidence 99999999888877766654211111 1 223468899999999999999999988
Q ss_pred H---HHhCCCccccccCCCCCCCC
Q 017139 312 L---EACAHPFFDELREPNARLPN 332 (376)
Q Consensus 312 ~---ell~hp~~~~~~~~~~~~~~ 332 (376)
. ++-.||||+...|.......
T Consensus 1084 ~~~~e~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1084 KGAAEVKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred ccccccccCCccCCCCcccccccc
Confidence 7 88999999999887654433
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=4.7e-15 Score=128.99 Aligned_cols=208 Identities=16% Similarity=0.206 Sum_probs=147.6
Q ss_pred HHHhCCCCCeeecceeeeecCCCCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC-CCc
Q 017139 80 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV-PGV 157 (376)
Q Consensus 80 ~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~~i 157 (376)
-+-.+.|.|||+++.++-+...++.....+++||+. |++...|+........+....+++|+.||+.||.|||+. .-|
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 344567999999999886666556677889999998 788888888777788899999999999999999999985 358
Q ss_pred eeccCCCCCeeecCCCCcEEEEecCCcccccc-----CCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHh
Q 017139 158 CHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-----GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL 232 (376)
Q Consensus 158 vH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~llt 232 (376)
+|+++..+-|++.. ++-+|+.--........ ........+.++|.+||.=.. .+.+.++|||++|....+|..
T Consensus 200 ihgnlTc~tifiq~-ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQH-NGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccCCcchhheeecC-CceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHHHHHH
Confidence 99999999999995 66666653221111000 011112345678899986432 236778999999999999998
Q ss_pred CCCCCC-CCChH---HHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCC
Q 017139 233 GQPLFP-GENAV---DQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 308 (376)
Q Consensus 233 g~~pf~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 308 (376)
|..--. +.... +.....+. .--..--++++.+||+-.|..|
T Consensus 278 lEiq~tnseS~~~~ee~ia~~i~-----------------------------------~len~lqr~~i~kcl~~eP~~r 322 (458)
T KOG1266|consen 278 LEIQSTNSESKVEVEENIANVII-----------------------------------GLENGLQRGSITKCLEGEPNGR 322 (458)
T ss_pred heeccCCCcceeehhhhhhhhee-----------------------------------eccCccccCcCcccccCCCCCC
Confidence 874322 21111 11111100 0011223588999999999999
Q ss_pred CCHHHHhCCCcccccc
Q 017139 309 CTALEACAHPFFDELR 324 (376)
Q Consensus 309 ~t~~ell~hp~~~~~~ 324 (376)
|++.+++-||.+-++.
T Consensus 323 p~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 323 PDARLLLFHPLLFEVH 338 (458)
T ss_pred cchhhhhcCceeeecc
Confidence 9999999999986653
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.50 E-value=7.3e-13 Score=125.85 Aligned_cols=187 Identities=22% Similarity=0.276 Sum_probs=133.1
Q ss_pred CccccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 30 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 30 ~~~~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
+....-|.+ ...+-++.+..-.|..+.++.++.+........ ...+.++-|+.++||||+++++.+ +.+.
T Consensus 9 ~~~~fpY~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~-----e~~~ 82 (690)
T KOG1243|consen 9 SSSQFPYDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTT-----EEEG 82 (690)
T ss_pred ccccCCccc-ccccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhh-----cccC
Confidence 334444666 444444444332466677888888887755433 245677889999999999999988 5556
Q ss_pred eEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 106 FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 106 ~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+|||+|-+.. |...++. ++...+...+.||+.||.+||.-++++|++|..+.|+++. .|..||++|.++.
T Consensus 83 ~~ylvTErV~P-l~~~lk~-------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~-~GeWkLggle~v~ 153 (690)
T KOG1243|consen 83 TLYLVTERVRP-LETVLKE-------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNE-SGEWKLGGLELVS 153 (690)
T ss_pred ceEEEeecccc-HHHHHHH-------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcC-CCcEEEeeeEEEe
Confidence 79999999874 3345554 3366777889999999999984378999999999999997 8899999999875
Q ss_pred ccccCCC-cceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCC
Q 017139 186 VLVKGEA-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 234 (376)
Q Consensus 186 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~ 234 (376)
....... .....---.|..|+.+... .-..|.|.|||++++++.|.
T Consensus 154 ~~~~~~~~~~~~~~~~s~~~P~~~~~s---~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 154 KASGFNAPAKSLYLIESFDDPEEIDPS---EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ccccCCcccccchhhhcccChhhcCcc---ccchhhhhHHHHHHHHhCcc
Confidence 5432221 1122223346677755221 24579999999999999993
No 439
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.45 E-value=7.3e-12 Score=115.70 Aligned_cols=234 Identities=18% Similarity=0.227 Sum_probs=163.8
Q ss_pred CCCccccceEeeeeec---cCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecC
Q 017139 28 GEPKQTISYMAERVVG---TGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTT 100 (376)
Q Consensus 28 ~~~~~~~~y~~~~~Lg---~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~ 100 (376)
+-|.....|.-+..|- .---.+.|+|....+|..|++|++..++. ..-.-+++++.+.|+|+|++.++|.+.
T Consensus 267 ~~p~lv~~~~~L~pl~~~~~~~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~- 345 (655)
T KOG3741|consen 267 GIPSLVESFVNLYPLELLNDLFSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTY- 345 (655)
T ss_pred cCCcchhhhhceeecccccccccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhh-
Confidence 3444444444433322 22345789999999999999999944321 223578999999999999999998733
Q ss_pred CCCceeEEEEeecccc--hHHHHHHhh-----------hhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCe
Q 017139 101 SKDELFLNLVMEYVPE--TMYRVLKHY-----------SSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNL 167 (376)
Q Consensus 101 ~~~~~~~~lv~e~~~g--~l~~~l~~~-----------~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Ni 167 (376)
..++..+++|++|.++ +|++..... -..+...+|..+|.++.|+..||.++|+ .|+.-+-|.|.+|
T Consensus 346 tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kI 424 (655)
T KOG3741|consen 346 TFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKI 424 (655)
T ss_pred ccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHe
Confidence 3567779999999984 666654332 1234568899999999999999999999 7999999999999
Q ss_pred eecCCCCcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCC-hHHHH
Q 017139 168 LVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN-AVDQL 246 (376)
Q Consensus 168 ll~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~-~~~~~ 246 (376)
+++. ..+++|...|......++. . |.+.+ -.+-|.-.||.+++.|.||..--...+ .....
T Consensus 425 lv~G-~~RIriS~C~i~Dvl~~d~-----------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~ 486 (655)
T KOG3741|consen 425 LVTG-KMRIRISGCGIMDVLQEDP-----------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSH 486 (655)
T ss_pred EeeC-cceEEEecccceeeecCCC-----------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHH
Confidence 9985 5588998888766554433 1 11211 234599999999999999964321122 11111
Q ss_pred HHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCC
Q 017139 247 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH 317 (376)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 317 (376)
... +...++.+++++|.-+...++++ -++.+++.|
T Consensus 487 ~~~-----------------------------------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 487 LTR-----------------------------------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred HHH-----------------------------------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 111 11346888999998888888876 577777644
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42 E-value=8.9e-13 Score=126.85 Aligned_cols=142 Identities=18% Similarity=0.221 Sum_probs=90.9
Q ss_pred cceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccc----------------------------------------
Q 017139 34 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY---------------------------------------- 73 (376)
Q Consensus 34 ~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------------------------------------- 73 (376)
.+|.. +.||+|++|+||+|+.+.+|+.||||+.......
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35666 7999999999999999888999999998643100
Q ss_pred ----hHHHHHHHHhC----CCCCeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcC---CCCCHHHHHHHHH
Q 017139 74 ----KNRELQLMRLM----DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN---QRMPLIYVKLYTY 142 (376)
Q Consensus 74 ----~~~e~~~l~~l----~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~---~~l~~~~~~~i~~ 142 (376)
..+|...+.++ .+.+.+.+..++.+-+ ...++||||+.|.-...+......+ ..+.+..+..++.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s----t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC----SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccC----CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 01233222222 2444455555553221 1256999999984222221111111 1355555555555
Q ss_pred HHHHHHHHhHcCCCceeccCCCCCeeecCCCC----cEEEEecCCcccccc
Q 017139 143 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH----QVKLCDFGSAKVLVK 189 (376)
Q Consensus 143 qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~----~~kl~Dfg~~~~~~~ 189 (376)
|++ . .|++|+|++|.||+++. ++ .++++|||++.....
T Consensus 275 Qif-------~-~GffHaDpHPGNIlv~~-~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 275 QVF-------R-DGFFHADMHPGNIFVSY-DPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHH-------h-CCeeeCCCChHHeEEec-CCCCCCeEEEEecceEEECCH
Confidence 554 4 69999999999999986 55 899999999876543
No 441
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.41 E-value=2.1e-12 Score=122.77 Aligned_cols=137 Identities=20% Similarity=0.242 Sum_probs=88.3
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecccccc--------------------------------------------h
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY--------------------------------------------K 74 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------------------------------------------~ 74 (376)
.+.||+|++|+||+|+. .+|+.||||+....... .
T Consensus 122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 46899999999999986 47899999987543100 0
Q ss_pred HHHHHHHHhC----CCCCeeecceeeeecCCCCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHH-HH
Q 017139 75 NRELQLMRLM----DHPNVISLKHCFFSTTSKDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFR-GL 148 (376)
Q Consensus 75 ~~e~~~l~~l----~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~-aL 148 (376)
.+|...+.++ ++.+-+.+..++.... ...++||||++|. +.+.... .. .... ...++.+++. .+
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~-~~--~~~~---~~~ia~~~~~~~l 270 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAAL-DE--AGLD---RKALAENLARSFL 270 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHH-Hh--cCCC---HHHHHHHHHHHHH
Confidence 1233333333 2333344444442211 1257999999974 3333221 11 1122 2345555554 46
Q ss_pred HHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 149 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 149 ~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
..+|. .|++|+|++|.||+++. ++.++++|||++....
T Consensus 271 ~ql~~-~g~~H~D~hPgNilv~~-~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 271 NQVLR-DGFFHADLHPGNIFVLK-DGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHh-CCceeCCCCcccEEECC-CCcEEEEeCCCeeECC
Confidence 78899 79999999999999986 7889999999987653
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.40 E-value=2e-12 Score=108.34 Aligned_cols=132 Identities=20% Similarity=0.215 Sum_probs=92.9
Q ss_pred eeeeccCCceEEEEEEEcC------CCcEEEEEEecc--------------ccc------------c----hHHHHHHHH
Q 017139 39 ERVVGTGSFGIVFQAKCLE------TGETVAIKKVLQ--------------DRR------------Y----KNRELQLMR 82 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~------~~~~~aiK~~~~--------------~~~------------~----~~~e~~~l~ 82 (376)
...||.|--+.||.|.... .+..+|||+.+. +.+ . .++|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999998653 357899997631 100 0 126888888
Q ss_pred hCCCC--CeeecceeeeecCCCCceeEEEEeecccch-HH-HHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHh-HcCCCc
Q 017139 83 LMDHP--NVISLKHCFFSTTSKDELFLNLVMEYVPET-MY-RVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI-HTVPGV 157 (376)
Q Consensus 83 ~l~h~--~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~-l~-~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~L-H~~~~i 157 (376)
++..- ++..++.+. . .+|||||++++ +. ..++. ..+++.....+..+++.+|..| |+ .|+
T Consensus 82 rl~~~Gv~vP~pi~~~-----~----~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H~-~gl 146 (197)
T cd05146 82 RMQKAGIPCPEVVVLK-----K----HVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYKE-CNL 146 (197)
T ss_pred HHHHcCCCCCeEEEec-----C----CEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHHh-CCe
Confidence 87543 333333321 1 56999999863 11 12221 2355566778889999999998 88 799
Q ss_pred eeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 158 CHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 158 vH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
+|+||++.||+++ ++.+.|+|||.+...
T Consensus 147 VHGDLs~~NIL~~--~~~v~iIDF~qav~~ 174 (197)
T cd05146 147 VHADLSEYNMLWH--DGKVWFIDVSQSVEP 174 (197)
T ss_pred ecCCCCHHHEEEE--CCcEEEEECCCceeC
Confidence 9999999999997 456999999988654
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=2.7e-13 Score=127.48 Aligned_cols=249 Identities=20% Similarity=0.166 Sum_probs=173.6
Q ss_pred ccccceEeeeeeccCCceEEEEEEEc-CCCcEEEEEEecccccch------HHHHHHHHhC-CCCCeeecceeeeecCCC
Q 017139 31 KQTISYMAERVVGTGSFGIVFQAKCL-ETGETVAIKKVLQDRRYK------NRELQLMRLM-DHPNVISLKHCFFSTTSK 102 (376)
Q Consensus 31 ~~~~~y~~~~~Lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~------~~e~~~l~~l-~h~~Iv~~~~~~~~~~~~ 102 (376)
....+|..+..||.|.|+.|+.+... .++..|++|.+.+..... ..|+.+...+ .|.|++.....+.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~----- 336 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS----- 336 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----
Confidence 34567899999999999999988765 677889999876543222 2355555544 5888888776663
Q ss_pred CceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecC
Q 017139 103 DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 182 (376)
Q Consensus 103 ~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg 182 (376)
.....|+--|||.+...++-. .....+.+...+.+..|++.++.++|+ ..++|+|++|+||++..+++..++.|||
T Consensus 337 ~~r~~~ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 337 QLRQGYIPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred ccccccCchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhhhccccc
Confidence 333356999999864333322 223557888899999999999999999 7999999999999998544889999999
Q ss_pred CccccccCCCcceeecccccc-ChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Q 017139 183 SAKVLVKGEANISYICSRYYR-APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 261 (376)
Q Consensus 183 ~~~~~~~~~~~~~~~~t~~y~-aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (376)
.+....- ..........+. .+|++.....+..+.|++|||..+.+.++|...-........+. . +
T Consensus 413 ~~t~~~~--~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~---~--~------- 478 (524)
T KOG0601|consen 413 CWTRLAF--SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIR---S--G------- 478 (524)
T ss_pred cccccce--ecccccccccccccchhhccccccccccccccccccccccccCcccCcccccceeee---c--c-------
Confidence 8864211 111222233344 36666555668899999999999999999875432222111110 0 0
Q ss_pred hhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCcccc
Q 017139 262 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 322 (376)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~ 322 (376)
..+ .......+++.+.+.++..|+..|+.+.++..|+-|..
T Consensus 479 ----------~~p----------~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 479 ----------DTP----------NLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ----------ccc----------CCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 000 01123467889999999999999999999988887754
No 444
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.36 E-value=4.4e-12 Score=105.31 Aligned_cols=126 Identities=15% Similarity=0.188 Sum_probs=90.0
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecccc---cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeeccc
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP 115 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~ 115 (376)
.+.|+.|.++.||++.. .++.+++|...... ....+|+.+++.+.+.+++...-.+ . .+. .++|||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~-~---~~~--~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF-D---PET--GVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE-e---CCC--CeEEEEecC
Confidence 46789999999999986 47889999875543 3356799999988765554322222 1 111 359999999
Q ss_pred chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCc-----eeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 116 ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGV-----CHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 116 g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~i-----vH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
|...... . .....++.+++.+|..||+ .++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--------~---~~~~~~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~--~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------D---FSDPENLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD--DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------c---ccCHHHHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE--CCeEEEEecccccC
Confidence 8421110 0 1123456789999999999 575 9999999999998 45699999998753
No 445
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.32 E-value=1.1e-12 Score=125.15 Aligned_cols=156 Identities=19% Similarity=0.301 Sum_probs=114.1
Q ss_pred HHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCC--------ccee--eccccccChhhhhCCCC
Q 017139 144 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA--------NISY--ICSRYYRAPELIFGATE 213 (376)
Q Consensus 144 il~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~--------~~~~--~~t~~y~aPE~~~~~~~ 213 (376)
+..||.|+|...++||++|.|++|.++. ++..||+.|+++........ .... .-...|.|||++.+. -
T Consensus 108 v~dgl~flh~sAk~VH~ni~p~~i~~na-~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~-~ 185 (700)
T KOG2137|consen 108 VADGLAFLHRSAKVVHGNIQPEAIVVNA-NGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT-T 185 (700)
T ss_pred ccchhhhhccCcceeecccchhheeecc-CcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc-c
Confidence 3489999998789999999999999997 78899999998765543111 1111 125569999999764 4
Q ss_pred CCccchhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChh
Q 017139 214 YTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPE 292 (376)
Q Consensus 214 ~~~~~DiwslG~il~~ll-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
.+.++|++|+||++|.+. .|+..+.+..............+. -...+..+++++
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~-------------------------~~~~~s~~~p~e 240 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA-------------------------GAFGYSNNLPSE 240 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc-------------------------ccccccccCcHH
Confidence 789999999999999999 566666554333222211111000 011133578999
Q ss_pred HHHHHHhhcCCCCCCCCCHHHHhCCCccccccCC
Q 017139 293 AIDLASRLLQYSPSLRCTALEACAHPFFDELREP 326 (376)
Q Consensus 293 ~~~li~~~L~~dP~~R~t~~ell~hp~~~~~~~~ 326 (376)
+++-+.++|..|+..||++..++..|||.+..-.
T Consensus 241 l~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~~ 274 (700)
T KOG2137|consen 241 LRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGLK 274 (700)
T ss_pred HHHHHHHHhcCCcccCcchhhhhcccccCCchhh
Confidence 9999999999999999999999999999875443
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.31 E-value=3.6e-11 Score=97.08 Aligned_cols=140 Identities=19% Similarity=0.237 Sum_probs=97.4
Q ss_pred eeeeeccCCceEEEEEEEcCCCcEEEEEEec-cc-----------ccchHHHHHHHHhCCCCCeeecceeeeecCCCCce
Q 017139 38 AERVVGTGSFGIVFQAKCLETGETVAIKKVL-QD-----------RRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDEL 105 (376)
Q Consensus 38 ~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~-~~-----------~~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~ 105 (376)
....+-+|+-+.|+++.. .|+.+.||.-. +. +....+|+.+|.++.--.|.-..-++.+.+.
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~---- 84 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYG---- 84 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCC----
Confidence 567889999999999987 78888888532 21 1233468888877654344333333333222
Q ss_pred eEEEEeecccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcE--EEEec
Q 017139 106 FLNLVMEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQV--KLCDF 181 (376)
Q Consensus 106 ~~~lv~e~~~g--~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~--kl~Df 181 (376)
-+|+|||++| ++..++.... ...........++..|-..+.-||. ++|+|+||..+||++.++++.+ .++||
T Consensus 85 -~~i~ME~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~-ndiiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 85 -GQIYMEFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHD-NDIIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred -CeEEEEeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhh-CCeecccccccceEEecCCCcCceEEEee
Confidence 4599999998 5555554422 2223333446788889999999999 8999999999999998655544 89999
Q ss_pred CCcccc
Q 017139 182 GSAKVL 187 (376)
Q Consensus 182 g~~~~~ 187 (376)
|++...
T Consensus 161 gls~~s 166 (229)
T KOG3087|consen 161 GLSSVS 166 (229)
T ss_pred cchhcc
Confidence 998653
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19 E-value=2.9e-10 Score=92.35 Aligned_cols=127 Identities=18% Similarity=0.305 Sum_probs=84.3
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc------------cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeE
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------------RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFL 107 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------------~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~ 107 (376)
..+++|+-+.+|.+.. -|..+++|.=.+.. ....+|+.++..+.--.|....=+.++ .+. -
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD---~~~--~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD---PDN--G 74 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc---CCC--C
Confidence 4578999999999865 44556777432211 122358888877654333222222222 222 3
Q ss_pred EEEeecccchHHH-HHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 108 NLVMEYVPETMYR-VLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 108 ~lv~e~~~g~l~~-~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.|+|||++|.+.. .+.. . ...++..+-.-+.-||. .||+|+||.++||+++. +.+.++|||++..
T Consensus 75 ~I~me~I~G~~lkd~l~~----~-------~~~~~r~vG~~vg~lH~-~givHGDLTtsNiIl~~--~~i~~IDfGLg~~ 140 (204)
T COG3642 75 LIVMEYIEGELLKDALEE----A-------RPDLLREVGRLVGKLHK-AGIVHGDLTTSNIILSG--GRIYFIDFGLGEF 140 (204)
T ss_pred EEEEEEeCChhHHHHHHh----c-------chHHHHHHHHHHHHHHh-cCeecCCCccceEEEeC--CcEEEEECCcccc
Confidence 4999999996544 3332 1 13456677778889999 89999999999999984 4499999999875
Q ss_pred c
Q 017139 187 L 187 (376)
Q Consensus 187 ~ 187 (376)
.
T Consensus 141 s 141 (204)
T COG3642 141 S 141 (204)
T ss_pred c
Confidence 3
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.16 E-value=2.9e-09 Score=96.56 Aligned_cols=258 Identities=16% Similarity=0.160 Sum_probs=157.9
Q ss_pred eeeeeccCCceEEEEEEEcCCCcEEEEEEecccccch--HHHHHHHHhCCCCCeeeccee---eeecCCCCceeEEEEee
Q 017139 38 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK--NRELQLMRLMDHPNVISLKHC---FFSTTSKDELFLNLVME 112 (376)
Q Consensus 38 ~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~e~~~l~~l~h~~Iv~~~~~---~~~~~~~~~~~~~lv~e 112 (376)
..+.||+|+-+.+|-.-. -...+.|+........ ++-..+.+.-.||-+-.-+.. .+... .....+.++|.
T Consensus 15 ~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGG-RRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecch---hhchhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCC-CccceeEEecc
Confidence 467899999999986542 2234567775543222 122333334456543321100 01111 22333678899
Q ss_pred cccc--hHHHHHH--hhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccc
Q 017139 113 YVPE--TMYRVLK--HYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 113 ~~~g--~l~~~l~--~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~ 188 (376)
.++| ....+.. ..........+....+++..++.+..-||. .|.+-+|+.++|+|++. ++.+.|.|-..-....
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd-~~~V~LVdsDsfqi~~ 168 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSD-DSKVVLVDSDSFQINA 168 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeec-CceEEEEcccceeecc
Confidence 8886 2222221 222334557888999999999999999999 79999999999999985 7889998765544444
Q ss_pred cCCCcceeeccccccChhhhhC----CCCCCccchhHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Q 017139 189 KGEANISYICSRYYRAPELIFG----ATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRC 263 (376)
Q Consensus 189 ~~~~~~~~~~t~~y~aPE~~~~----~~~~~~~~DiwslG~il~~lltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (376)
++......+|.+.|.+||...- ...-+...|.|.||+++++++.| +.||.+.... . -.+.|....+..
T Consensus 169 ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~------~-~ap~p~E~~Ia~ 241 (637)
T COG4248 169 NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLI------S-DAPNPLETDIAH 241 (637)
T ss_pred CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccccc------C-CCCCcchhhhhc
Confidence 5555566778999999997531 12246789999999999999986 9999764210 0 000000101110
Q ss_pred cC----cCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCC--CCCCCCCHHH
Q 017139 264 MN----PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQY--SPSLRCTALE 313 (376)
Q Consensus 264 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~--dP~~R~t~~e 313 (376)
.. +....-..|.....+| .-++++++.+..+|++. ++.-|||++.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~-----~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPL-----SMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred ceeeechhccCCCCCCCCCCCh-----hhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 00 0001111222222333 34789999999999984 3568999753
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.09 E-value=8.5e-10 Score=92.21 Aligned_cols=121 Identities=26% Similarity=0.320 Sum_probs=75.6
Q ss_pred EEEEEEEcCCCcEEEEEEecccc------------------------------cchHHHHHHHHhCCCCC--eeecceee
Q 017139 49 IVFQAKCLETGETVAIKKVLQDR------------------------------RYKNRELQLMRLMDHPN--VISLKHCF 96 (376)
Q Consensus 49 ~V~~~~~~~~~~~~aiK~~~~~~------------------------------~~~~~e~~~l~~l~h~~--Iv~~~~~~ 96 (376)
.||.|.. .+|+.+|+|+..... ....+|...|..+..-+ +.+++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4888886 567799999873210 01136899999997654 44443322
Q ss_pred eecCCCCceeEEEEeeccc--chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHH-hHcCCCceeccCCCCCeeecCCC
Q 017139 97 FSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY-IHTVPGVCHRDVKPQNLLVDPLT 173 (376)
Q Consensus 97 ~~~~~~~~~~~~lv~e~~~--g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~-LH~~~~ivH~dlkp~Nill~~~~ 173 (376)
. .+|||||++ |.....+... .++......++.+++..+.. +|. .||+|+||++.||+++. +
T Consensus 80 -----~----~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~-~givHGDLs~~NIlv~~-~ 143 (188)
T PF01163_consen 80 -----R----NVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLHK-AGIVHGDLSEYNILVDD-G 143 (188)
T ss_dssp -----T----TEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHHC-TTEEESS-STTSEEEET-T
T ss_pred -----C----CEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHHh-cCceecCCChhhEEeec-c
Confidence 1 359999999 6433333331 12233456677788885555 578 79999999999999985 4
Q ss_pred CcEEEEecCCcccc
Q 017139 174 HQVKLCDFGSAKVL 187 (376)
Q Consensus 174 ~~~kl~Dfg~~~~~ 187 (376)
.+.|+|||.+...
T Consensus 144 -~~~iIDf~qav~~ 156 (188)
T PF01163_consen 144 -KVYIIDFGQAVDS 156 (188)
T ss_dssp -CEEE--GTTEEET
T ss_pred -eEEEEecCcceec
Confidence 7999999988654
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.04 E-value=7.6e-09 Score=91.69 Aligned_cols=133 Identities=11% Similarity=0.093 Sum_probs=89.1
Q ss_pred EEEEEEEcCCCcEEEEEEecccc---------------cchHHHHHHHHhCCCCCeeec--ceeeeecCCCCceeEEEEe
Q 017139 49 IVFQAKCLETGETVAIKKVLQDR---------------RYKNRELQLMRLMDHPNVISL--KHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 49 ~V~~~~~~~~~~~~aiK~~~~~~---------------~~~~~e~~~l~~l~h~~Iv~~--~~~~~~~~~~~~~~~~lv~ 111 (376)
.|+++.. .|+.|.||...... ....+|...+..+..-+|... +.+...........-++||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 4555543 56778888653221 125578888888754444333 2232211111123356999
Q ss_pred ecccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecC------CCCcEEEEecCC
Q 017139 112 EYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP------LTHQVKLCDFGS 183 (376)
Q Consensus 112 e~~~g--~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~------~~~~~kl~Dfg~ 183 (376)
|++++ +|.+++.... ....+......++.++...+.-||. .||+|+||++.|||++. ++..+.|+||+.
T Consensus 115 e~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 115 EDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred eeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 99997 4666654322 2345667788999999999999999 79999999999999974 246799999998
Q ss_pred ccc
Q 017139 184 AKV 186 (376)
Q Consensus 184 ~~~ 186 (376)
+..
T Consensus 192 ~~~ 194 (268)
T PRK15123 192 AQI 194 (268)
T ss_pred ccc
Confidence 753
No 451
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.04 E-value=4.9e-09 Score=90.85 Aligned_cols=140 Identities=19% Similarity=0.197 Sum_probs=92.8
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEeccc-----ccchHHHHHHHHhCCCCC--eeecceeeeecCCCCceeEEEEee
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPN--VISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-----~~~~~~e~~~l~~l~h~~--Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+.|+.|..+.||++... +|+.+++|..... ......|.++++.+.+.+ +.+++.+.. ........++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~--~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCE--DPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECC--CCCccCCceEEEE
Confidence 57899999999999874 3688999987653 234568999999987644 344444331 1111124579999
Q ss_pred cccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC--------------------------------------
Q 017139 113 YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV-------------------------------------- 154 (376)
Q Consensus 113 ~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-------------------------------------- 154 (376)
|++|....... . ...+++.....++.+++.+|..||+.
T Consensus 81 ~i~G~~l~~~~---~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (223)
T cd05154 81 RVDGRVLRDRL---L-RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA 156 (223)
T ss_pred EeCCEecCCCC---C-CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence 99974211110 0 02355555556666666666666631
Q ss_pred -----------------CCceeccCCCCCeeecCC-CCcEEEEecCCccc
Q 017139 155 -----------------PGVCHRDVKPQNLLVDPL-THQVKLCDFGSAKV 186 (376)
Q Consensus 155 -----------------~~ivH~dlkp~Nill~~~-~~~~kl~Dfg~~~~ 186 (376)
..++|+|++|.||+++.+ ++.+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246999999999999853 35588999998764
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.87 E-value=1.7e-08 Score=87.06 Aligned_cols=131 Identities=21% Similarity=0.177 Sum_probs=90.7
Q ss_pred eEeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc--------------------------ccchHHHHHHHHhCCCC--
Q 017139 36 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--------------------------RRYKNRELQLMRLMDHP-- 87 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--------------------------~~~~~~e~~~l~~l~h~-- 87 (376)
+.++..||.|--|.||.|.+. .|..+|||.=... +...++|.+.|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567789999999999999964 7899999953110 12234788899888654
Q ss_pred CeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCe
Q 017139 88 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNL 167 (376)
Q Consensus 88 ~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Ni 167 (376)
.+.+.++ .+...+|||+++|-. +.. -+++......++..|+.-+...-. .|++|+|+++-||
T Consensus 172 ~VP~P~~---------~nRHaVvMe~ieG~e---L~~-----~r~~~en~~~il~~il~~~~~~~~-~GiVHGDlSefNI 233 (304)
T COG0478 172 KVPKPIA---------WNRHAVVMEYIEGVE---LYR-----LRLDVENPDEILDKILEEVRKAYR-RGIVHGDLSEFNI 233 (304)
T ss_pred CCCCccc---------cccceeeeehcccce---eec-----ccCcccCHHHHHHHHHHHHHHHHH-cCccccCCchheE
Confidence 4444432 233679999999842 211 111233444555555555555556 6999999999999
Q ss_pred eecCCCCcEEEEecCCccc
Q 017139 168 LVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 168 ll~~~~~~~kl~Dfg~~~~ 186 (376)
+++. ++.+.++||-.+..
T Consensus 234 lV~~-dg~~~vIDwPQ~v~ 251 (304)
T COG0478 234 LVTE-DGDIVVIDWPQAVP 251 (304)
T ss_pred EEec-CCCEEEEeCccccc
Confidence 9996 77899999987654
No 453
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.80 E-value=8.8e-10 Score=104.60 Aligned_cols=246 Identities=20% Similarity=0.196 Sum_probs=165.3
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHhCCCCC-eeecceeeeecCCCCceeEEEEeec
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPN-VISLKHCFFSTTSKDELFLNLVMEY 113 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~l~~l~h~~-Iv~~~~~~~~~~~~~~~~~~lv~e~ 113 (376)
-|...+-+++|+++++++.+...+.... .+.+... ....-++++|..++||| .+..++- .+.+.+..+++++
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-l~~rl~~eLLdK~n~P~~~v~~~~d-----~~~E~~~~i~~~i 315 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-LSRRLAIELLDKVNNPNPVVRYLED-----YDGEDYLWIPMRI 315 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-hhhHHHHHHHHHccCCCCccccccc-----CCcccccchhhhh
Confidence 4567788999999999999876555444 6666554 33445899999999999 3333222 2667778899999
Q ss_pred ccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCc
Q 017139 114 VPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 193 (376)
Q Consensus 114 ~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~ 193 (376)
|+++-..... .......+.+.+...++..-..+|+++|+ ..=+|+| ||+.. ++..+..||+...........
T Consensus 316 ~s~~rs~~~~-~~~se~~~~~~~~~~~~r~et~~l~~l~~-~~~~~~d----~~l~s--~~~~~~~~~~v~~~L~~~~~~ 387 (829)
T KOG0576|consen 316 CSTGRSSALE-MTVSEIALEQYQFAYPLRKETRPLAELHS-SYKVHRD----NILGS--EEEVKLLDFAVPPQLTRTMKP 387 (829)
T ss_pred hcCCcccccc-CChhhHhhhhhhhhhhhhhhccccccccc-ccccCcc----ccccc--ccccccccccCCcccCccccc
Confidence 9864000000 01112334455566677777889999998 4458888 88776 456899999998776655556
Q ss_pred ceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccC
Q 017139 194 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 273 (376)
Q Consensus 194 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (376)
.+..+++.++|||+..... +....|.|++|.-..++.-|.+|-..... .....|..+ ..
T Consensus 388 ~t~~~~~~~~~pev~~~~~-~~~~p~~~~~~~~~~~~ap~~pPr~~P~~------~~~~~g~~p--------------~s 446 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQENT-IDGCPDSGSLAVSAIQMAPGLPPRSSPPA------VLPMIGNGP--------------NS 446 (829)
T ss_pred ccCCCCCCCCCchhhcccc-cccCCCccCCCcchhhcCCCCCCCCCCcc------ccCCCCCCC--------------Cc
Confidence 6788899999999886654 88899999999887788888777544110 000001000 00
Q ss_pred CCC-CCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHHhCCCccccc
Q 017139 274 PQI-KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 323 (376)
Q Consensus 274 ~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~~~~~ 323 (376)
+.+ ....|...+++ ++...|+...|..|+...+++-|.+|...
T Consensus 447 ~~L~~~~aw~~~~~~-------~~~~~~~~g~P~~pkv~mgacfsKvfngC 490 (829)
T KOG0576|consen 447 PMLTDKSAWSPVFHR-------DFPAPCLNGLPPTPKVHMGACFSKVFNGC 490 (829)
T ss_pred cccchhhhcCccccc-------CCcccccCCCCCCCcchhhHHHHHHhccC
Confidence 111 11223222222 67889999999999999999999999765
No 454
>PRK09902 hypothetical protein; Provisional
Probab=98.69 E-value=7.5e-07 Score=75.11 Aligned_cols=137 Identities=12% Similarity=0.084 Sum_probs=95.2
Q ss_pred ccCCceEEEEEEEcCCCcEEEEEEecc----------cccchHHHHHHHHhCCCCCee--ecceeeeecCCCCceeEEEE
Q 017139 43 GTGSFGIVFQAKCLETGETVAIKKVLQ----------DRRYKNRELQLMRLMDHPNVI--SLKHCFFSTTSKDELFLNLV 110 (376)
Q Consensus 43 g~G~~g~V~~~~~~~~~~~~aiK~~~~----------~~~~~~~e~~~l~~l~h~~Iv--~~~~~~~~~~~~~~~~~~lv 110 (376)
|+||.+-|++... .|+.+-+|.-.. ......+|...++.+..-+|. ++. ++-.........-+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 5689999998765 445688886531 223456899998888644433 332 2211222334456799
Q ss_pred eecccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCc--EEEEecCCccc
Q 017139 111 MEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKV 186 (376)
Q Consensus 111 ~e~~~g--~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~--~kl~Dfg~~~~ 186 (376)
+|-++| +|.+.+... .-.+.++.....++.++..++.-||+ .|+.|+|+-+.||+++. ++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~-~Gv~Hgdly~khIll~~-~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHS-VNRQHGCCYVRHIYVKT-EGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHhheeecC-CCCeeEEEEEhhccch
Confidence 998885 665555432 12345777778999999999999999 79999999999999984 344 99999987654
No 455
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.69 E-value=2.1e-07 Score=79.74 Aligned_cols=107 Identities=19% Similarity=0.277 Sum_probs=74.8
Q ss_pred hHHHHHHHHhCCCCCeee--cceeeeecCCCCceeEEEEeecccc--hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHH
Q 017139 74 KNRELQLMRLMDHPNVIS--LKHCFFSTTSKDELFLNLVMEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 149 (376)
Q Consensus 74 ~~~e~~~l~~l~h~~Iv~--~~~~~~~~~~~~~~~~~lv~e~~~g--~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~ 149 (376)
..+|...+..+..-.|.. .+.+..... .....-++|+|++++ +|.+.+... ...+......++.++...+.
T Consensus 58 a~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 58 AKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQW----EQLDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHHHH
Confidence 456888777775433332 233322211 112345799999997 455555442 22666777889999999999
Q ss_pred HhHcCCCceeccCCCCCeeecCCC--CcEEEEecCCccc
Q 017139 150 YIHTVPGVCHRDVKPQNLLVDPLT--HQVKLCDFGSAKV 186 (376)
Q Consensus 150 ~LH~~~~ivH~dlkp~Nill~~~~--~~~kl~Dfg~~~~ 186 (376)
-||. +||+|+|+++.|||++.++ ..+.++||+.++.
T Consensus 133 ~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999 7999999999999998633 2699999998765
No 456
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.63 E-value=9e-07 Score=74.93 Aligned_cols=137 Identities=15% Similarity=0.225 Sum_probs=83.8
Q ss_pred ccceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecccccchH-------------HHHHHHHhCCCCCeeecceeeee-
Q 017139 33 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------------RELQLMRLMDHPNVISLKHCFFS- 98 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-------------~e~~~l~~l~h~~Iv~~~~~~~~- 98 (376)
.++|.+.+++-......|.+..- +|+.+.+|.........+ +++..+..+....+..+-..++.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 45788889998888777766654 778999998755432222 23333333322222111111100
Q ss_pred --cCCCCceeEEEEeecccch-HHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCc
Q 017139 99 --TTSKDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ 175 (376)
Q Consensus 99 --~~~~~~~~~~lv~e~~~g~-l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~ 175 (376)
-...-....+++|||++|- |.+.. .+++ .+...+..++.-||+ .|+.|+|.+|.|++++. + .
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~--------~i~e----~~~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~-~-~ 172 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIE--------DIDE----DLAEKIVEAIKQLHK-HGFYHGDPHPGNFLVSN-N-G 172 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccch--------hcCH----HHHHHHHHHHHHHHH-cCCccCCCCcCcEEEEC-C-c
Confidence 0001123356899999983 22211 1222 233467778999999 79999999999999983 4 4
Q ss_pred EEEEecCCccc
Q 017139 176 VKLCDFGSAKV 186 (376)
Q Consensus 176 ~kl~Dfg~~~~ 186 (376)
++++||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999987653
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.60 E-value=1.4e-07 Score=90.57 Aligned_cols=138 Identities=21% Similarity=0.234 Sum_probs=83.5
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccccc--------------------------------------------hH
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY--------------------------------------------KN 75 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------------------------------------------~~ 75 (376)
..|+.++-|+||+|+.. +|+.||||+....... ..
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 68999999999999965 4999999987432100 01
Q ss_pred HHHHHHHhC----CCCCeeecceeeeecCCCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 017139 76 RELQLMRLM----DHPNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 150 (376)
Q Consensus 76 ~e~~~l~~l----~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~ 150 (376)
+|..-+.++ ....-+.+..++..-.+ .-.++|||++| .+.+.... .. ..++...+...+.++.. ..
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~----~~VLtmE~i~Gi~i~d~~~l-~~--~g~d~k~ia~~~~~~f~--~q 280 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTT----RRVLTMEWIDGIKISDIAAL-KS--AGIDRKELAELLVRAFL--RQ 280 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccC----CcEEEEEeeCCEecccHHHH-Hh--cCCCHHHHHHHHHHHHH--HH
Confidence 244333333 23333444555532211 14599999998 33333211 11 33443333322222221 22
Q ss_pred hHcCCCceeccCCCCCeeecCCCCcEEEEecCCcccccc
Q 017139 151 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK 189 (376)
Q Consensus 151 LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~ 189 (376)
+-. .|++|.|.+|.||+++. ++.+.+.|||+.....+
T Consensus 281 ~~~-dgffHaDpHpGNi~v~~-~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 281 LLR-DGFFHADPHPGNILVRS-DGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHh-cCccccCCCccceEEec-CCcEEEEcCcceecCCH
Confidence 222 59999999999999997 78899999999866543
No 458
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.55 E-value=9.2e-07 Score=75.71 Aligned_cols=134 Identities=18% Similarity=0.166 Sum_probs=87.6
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecccccc----------------------------hHHHHHHHHhCCCC--C
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY----------------------------KNRELQLMRLMDHP--N 88 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----------------------------~~~e~~~l~~l~h~--~ 88 (376)
...|++|--+.||+|.. .++..+|+|++...-.. ..+|..-|+++..- .
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34888999999999984 56889999988432100 12466677776433 3
Q ss_pred eeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCee
Q 017139 89 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL 168 (376)
Q Consensus 89 Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nil 168 (376)
+.+.+.+. . -.|||||++... .-.-.-..-.+.......+..+++..+.-|-...++||+||+.-|||
T Consensus 132 vP~Pi~~~-----~----nVLvMEfIg~~g---~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL 199 (268)
T COG1718 132 VPEPIAFR-----N----NVLVMEFIGDDG---LPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNIL 199 (268)
T ss_pred CCCceeec-----C----CeEEEEeccCCC---CCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheE
Confidence 33333332 1 349999998420 00000011223333566777788888877665359999999999999
Q ss_pred ecCCCCcEEEEecCCcccc
Q 017139 169 VDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 169 l~~~~~~~kl~Dfg~~~~~ 187 (376)
+. ++.+.|+|||.+...
T Consensus 200 ~~--~~~p~iID~~QaV~~ 216 (268)
T COG1718 200 VH--DGEPYIIDVSQAVTI 216 (268)
T ss_pred EE--CCeEEEEECcccccc
Confidence 98 567999999988654
No 459
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.52 E-value=5e-07 Score=91.78 Aligned_cols=205 Identities=21% Similarity=0.302 Sum_probs=137.0
Q ss_pred HHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc
Q 017139 75 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 153 (376)
Q Consensus 75 ~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~ 153 (376)
+.|...+..+.|+|++.+..+-+.....+ ....+..++|.. ++...+.+ -..++....+.+..+++.||.++|+
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q~----v~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQS----VGSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHhh----ccccCHHHHHHHHHHHhhhHHHHHH
Confidence 35677788889999999877664432222 233455677775 44444443 4668889999999999999999999
Q ss_pred CCCceeccCCCC---CeeecCCCCcEEEE--ecCCccccccCCCcceeeccccccChhhhhCCCCCCc--cchhHHHHHH
Q 017139 154 VPGVCHRDVKPQ---NLLVDPLTHQVKLC--DFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTT--SIDIWSAGCV 226 (376)
Q Consensus 154 ~~~ivH~dlkp~---Nill~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~--~~DiwslG~i 226 (376)
....|.-|..+ +.-.+. .+...++ ||+...................+.++|...... ... ..|+|++|..
T Consensus 305 -~~l~~v~L~~s~~~~~~~~~-e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~-~~~~r~~dL~~lgll 381 (1351)
T KOG1035|consen 305 -LSLEHVVLSASSSKESTVDG-EGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENT-AKKSRLTDLWCLGLL 381 (1351)
T ss_pred -hccceeEEecccccccccCc-cceeecchhhhcccccCCCcccchhhcCcccccccccccccc-chhhhhhHHHHHHHH
Confidence 55555555444 222332 3445555 888887766666555666677788888774432 333 3699999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCC
Q 017139 227 LAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPS 306 (376)
Q Consensus 227 l~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 306 (376)
...+..|..+-.... ..... .+........+++.+|+.-+++
T Consensus 382 ~~~~~~~~~i~~~~~------~~~~~--------------------------------l~~~~~~~~~d~~~~~~~~~~~ 423 (1351)
T KOG1035|consen 382 LLQLSQGEDISEKSA------VPVSL--------------------------------LDVLSTSELLDALPKCLDEDSE 423 (1351)
T ss_pred HhhhhhcCccccccc------chhhh--------------------------------hccccchhhhhhhhhhcchhhh
Confidence 999998764421110 00000 0011122678999999999999
Q ss_pred CCCCHHHHhCCCccccccC
Q 017139 307 LRCTALEACAHPFFDELRE 325 (376)
Q Consensus 307 ~R~t~~ell~hp~~~~~~~ 325 (376)
+|+++.+++.|||.+.-..
T Consensus 424 ~Rl~~~~ll~~~f~~~~~~ 442 (1351)
T KOG1035|consen 424 ERLSALELLTHPFLRFPTD 442 (1351)
T ss_pred hccchhhhhhchhcccccc
Confidence 9999999999999976433
No 460
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.39 E-value=1.7e-06 Score=83.10 Aligned_cols=137 Identities=20% Similarity=0.260 Sum_probs=84.8
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecccccc-----------------------------------------hHHH
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY-----------------------------------------KNRE 77 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------------------------~~~e 77 (376)
.+.||..+.|+|++|+.+. |+.||||+-+...+. ..+|
T Consensus 166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 4689999999999999765 999999976432100 0023
Q ss_pred HH----HHHhCCCCC---eeecceeeeecCCCCceeEEEEeecccch---HHHHHHhhhhcCCCCCHHHHHHHHHHHHHH
Q 017139 78 LQ----LMRLMDHPN---VISLKHCFFSTTSKDELFLNLVMEYVPET---MYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 147 (376)
Q Consensus 78 ~~----~l~~l~h~~---Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~---l~~~l~~~~~~~~~l~~~~~~~i~~qil~a 147 (376)
++ +.+.+.|-+ -|.+..++..-. ..-.|+||||+|- -.+.+.. ..++...+..-+.+...-
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s----t~RVLtME~~~G~~i~Dl~~i~~-----~gi~~~~i~~~l~~~~~~ 315 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLS----TKRVLTMEYVDGIKINDLDAIDK-----RGISPHDILNKLVEAYLE 315 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcC----cceEEEEEecCCccCCCHHHHHH-----cCCCHHHHHHHHHHHHHH
Confidence 22 223344545 233444443221 1256999999972 2233332 445555544444443321
Q ss_pred HHHhHcCCCceeccCCCCCeeecC---CCCcEEEEecCCccccc
Q 017139 148 LAYIHTVPGVCHRDVKPQNLLVDP---LTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 148 L~~LH~~~~ivH~dlkp~Nill~~---~~~~~kl~Dfg~~~~~~ 188 (376)
-|-. .|++|+|=+|.||++++ .+..+.+.|||+.....
T Consensus 316 --qIf~-~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 316 --QIFK-TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred --HHHh-cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 2223 58999999999999984 36789999999987553
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.36 E-value=3.4e-06 Score=73.51 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=49.6
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEeccc--ccchHHHHHHHHhCCCCCe--eecceeeeecCCCCceeEEEEeecc
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRLMDHPNV--ISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~e~~~l~~l~h~~I--v~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
++.|+.|..+.||++.... ..+++|..... .....+|..+++.+....+ .+++... .........+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~--~~~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFD--TSDEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEE--EETEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeec--ccccccccceEEEEEe
Confidence 4689999999999999744 58999987655 2344578888887754333 3443322 1113334478999999
Q ss_pred cch
Q 017139 115 PET 117 (376)
Q Consensus 115 ~g~ 117 (376)
+|.
T Consensus 78 ~g~ 80 (239)
T PF01636_consen 78 PGR 80 (239)
T ss_dssp SSE
T ss_pred ccc
Confidence 873
No 462
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.24 E-value=1.7e-05 Score=68.79 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=45.6
Q ss_pred eeeccCCceEEEEEEEcCCCcEEEEEEecccc--cchHHHHHHHHhCCCCCe--eecceeeeecCCCCceeEEEEeeccc
Q 017139 40 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRLMDHPNV--ISLKHCFFSTTSKDELFLNLVMEYVP 115 (376)
Q Consensus 40 ~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h~~I--v~~~~~~~~~~~~~~~~~~lv~e~~~ 115 (376)
..||+|..+.||+. .+..+++|...... ....+|.++++.+..-.+ .+.+++. ++.....+|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~-----~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLV-----EDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEE-----ecCCeeeeeeeecC
Confidence 57899999999974 24567889875532 234679999988764333 3333333 23333678999999
Q ss_pred ch
Q 017139 116 ET 117 (376)
Q Consensus 116 g~ 117 (376)
|.
T Consensus 78 G~ 79 (226)
T TIGR02172 78 GK 79 (226)
T ss_pred Cc
Confidence 83
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.01 E-value=7.8e-05 Score=77.20 Aligned_cols=77 Identities=18% Similarity=0.188 Sum_probs=50.2
Q ss_pred eeeeccCCceEEEEEEEcCCC--cEEEEEEeccc-----ccchHHHHHHHHhCC-CCCe--eecceeeeecCCCCceeEE
Q 017139 39 ERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQD-----RRYKNRELQLMRLMD-HPNV--ISLKHCFFSTTSKDELFLN 108 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~--~~~aiK~~~~~-----~~~~~~e~~~l~~l~-h~~I--v~~~~~~~~~~~~~~~~~~ 108 (376)
++.|+.|.++.+|+......+ ..+++|+.... .....+|..+++.+. |+++ .+++.++.+ .......|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d--~~v~G~~f 120 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTD--ASVIGTAF 120 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecC--CCcCCCce
Confidence 577899999999998765432 46788876432 234568999999995 6664 333333311 11123467
Q ss_pred EEeecccch
Q 017139 109 LVMEYVPET 117 (376)
Q Consensus 109 lv~e~~~g~ 117 (376)
+||||++|.
T Consensus 121 lVME~v~G~ 129 (822)
T PLN02876 121 YIMEYLEGR 129 (822)
T ss_pred EEEEecCCc
Confidence 999999874
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.99 E-value=0.00011 Score=61.74 Aligned_cols=127 Identities=24% Similarity=0.347 Sum_probs=86.1
Q ss_pred ccceEeeeeeccCCc-eEEEEEEEcCCCcEEEEEEecc---c------------cc----------chHHHHH---HHHh
Q 017139 33 TISYMAERVVGTGSF-GIVFQAKCLETGETVAIKKVLQ---D------------RR----------YKNRELQ---LMRL 83 (376)
Q Consensus 33 ~~~y~~~~~Lg~G~~-g~V~~~~~~~~~~~~aiK~~~~---~------------~~----------~~~~e~~---~l~~ 83 (376)
..+++..+.||.|.- |.||+++. .|+.||+|.+.. . .. .+..|-. .|+.
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 368999999999999 99999987 778999999421 0 00 0112333 3444
Q ss_pred CCCCCe--eecceeeeecCC-------------CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHH
Q 017139 84 MDHPNV--ISLKHCFFSTTS-------------KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 148 (376)
Q Consensus 84 l~h~~I--v~~~~~~~~~~~-------------~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL 148 (376)
..+.++ |+.++++..... .......||.||....- .++...+ .++++-|
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~~~----~~~~~dl 177 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIRDI----PQMLRDL 177 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchhHH----HHHHHHH
Confidence 556666 888887754321 11223457888776531 2333333 4677788
Q ss_pred HHhHcCCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 149 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 149 ~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+|. .||+-+|+++.|.. ++ ||+|||.+
T Consensus 178 ~~~~k-~gI~~~Dv~~~ny~----~G--~lvDfs~~ 206 (207)
T PF13095_consen 178 KILHK-LGIVPRDVKPRNYR----GG--KLVDFSSS 206 (207)
T ss_pred HHHHH-CCeeeccCcccccc----CC--EEEecccC
Confidence 99999 69999999999985 33 89999964
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.93 E-value=0.00015 Score=63.86 Aligned_cols=70 Identities=17% Similarity=0.103 Sum_probs=42.4
Q ss_pred eeccCCc-eEEEEEEEcCCCcEEEEEEeccc-ccchHHHHHHHHhCCC-CCeeecceeeeecCCCCceeEEEEeecccch
Q 017139 41 VVGTGSF-GIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRLMDH-PNVISLKHCFFSTTSKDELFLNLVMEYVPET 117 (376)
Q Consensus 41 ~Lg~G~~-g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~e~~~l~~l~h-~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~ 117 (376)
.|..|.. +.||++.. .+..+.+|+.... .....+|+.+++.+.. --+.+++.+. ......++|||+++|.
T Consensus 5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYG-----SDDGRAWLLTSAVPGV 77 (244)
T ss_pred ecCCCCCcCeEEEEcC--CCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEE-----ecCCccEEEEEeeCCc
Confidence 3444555 78898875 3467888877543 1235578988888753 2233333333 1223356999999873
No 466
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.93 E-value=7.7e-05 Score=60.67 Aligned_cols=126 Identities=19% Similarity=0.292 Sum_probs=84.9
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEecccc--cchHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecc
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--RYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 114 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~ 114 (376)
.+.+.|++|.+|.||++.. .|..+|+|+-..+. ..++.|+++|..++-.++-+-.-.+ . + -++.|||+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~y-g---~----~~i~me~i 94 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFY-G---E----DFIRMEYI 94 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEe-c---h----hhhhhhhh
Confidence 5578899999999999987 56689999876553 4567899999998876665533222 1 1 23669999
Q ss_pred cc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCC-C-CeeecCCCCcEEEEecCCccc
Q 017139 115 PE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKP-Q-NLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 115 ~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp-~-Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.| .|.+.... .+...+ ..++.+---|-. .||-|+.|+- . ||+++ ++.+.|+||..|+.
T Consensus 95 ~G~~L~~~~~~-------~~rk~l----~~vlE~a~~LD~-~GI~H~El~~~~k~vlv~--~~~~~iIDFd~At~ 155 (201)
T COG2112 95 DGRPLGKLEIG-------GDRKHL----LRVLEKAYKLDR-LGIEHGELSRPWKNVLVN--DRDVYIIDFDSATF 155 (201)
T ss_pred cCcchhhhhhc-------ccHHHH----HHHHHHHHHHHH-hccchhhhcCCceeEEec--CCcEEEEEccchhh
Confidence 98 43322211 122223 345555445556 5999998863 3 56665 44799999999874
No 467
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.88 E-value=8.3e-05 Score=67.35 Aligned_cols=137 Identities=17% Similarity=0.191 Sum_probs=93.3
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc------c------------------------cchHHHHHHHHhCCC
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------R------------------------RYKNRELQLMRLMDH 86 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~------~------------------------~~~~~e~~~l~~l~h 86 (376)
.+-.+|..|--+.||.|. ..+|..+|||+++-. + ...++|+.-|+++..
T Consensus 147 ~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 456688999999999998 467888999986321 1 011357777888875
Q ss_pred CCeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 87 PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 87 ~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
-.|....-+.+- ...|||++++..- +-.-.-..-.++...++.+-.|++.-+.-|-+..++||.||+--|
T Consensus 226 aGIP~PePIlLk-------~hVLVM~FlGrdg---w~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN 295 (520)
T KOG2270|consen 226 AGIPCPEPILLK-------NHVLVMEFLGRDG---WAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN 295 (520)
T ss_pred cCCCCCCceeee-------cceEeeeeccCCC---CcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence 554332222211 1459999998421 111111234566667777777888888877655799999999999
Q ss_pred eeecCCCCcEEEEecCCccc
Q 017139 167 LLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~ 186 (376)
+|+- +|.+.|+|.+-+..
T Consensus 296 ~Lyh--dG~lyiIDVSQSVE 313 (520)
T KOG2270|consen 296 LLYH--DGKLYIIDVSQSVE 313 (520)
T ss_pred heEE--CCEEEEEEcccccc
Confidence 9996 67799999987643
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.77 E-value=0.00033 Score=59.23 Aligned_cols=128 Identities=20% Similarity=0.280 Sum_probs=82.1
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecccc--------------------cchHHHHHHHHhCC------CCCeeec
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------------------RYKNRELQLMRLMD------HPNVISL 92 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------------~~~~~e~~~l~~l~------h~~Iv~~ 92 (376)
...||+|+.-.||.-- .....+||+..... ....+|+.....+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 3578999999998543 34457889886655 23345666555555 7889999
Q ss_pred ceeeeecCCCCceeEEEEeeccc---chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeee
Q 017139 93 KHCFFSTTSKDELFLNLVMEYVP---ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 169 (376)
Q Consensus 93 ~~~~~~~~~~~~~~~~lv~e~~~---g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill 169 (376)
++...+. .-..+|+|.+. |.....+..+.. ...+++ .....+. .-.++|-+ ++|+.+|++|.||++
T Consensus 83 ~G~veT~-----~G~Glv~e~I~d~dG~~s~TL~~~l~-~~~~~~-~~~~~L~---~f~~~l~~-~~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 83 YGFVETN-----LGLGLVVELIRDADGNISPTLEDYLK-EGGLTE-ELRQALD---EFKRYLLD-HHIVIRDLNPHNIVV 151 (199)
T ss_pred eEEEecC-----CceEEEEEEEECCCCCcCccHHHHHH-cCCccH-HHHHHHH---HHHHHHHH-cCCeecCCCcccEEE
Confidence 9988443 33778888764 433333333332 345666 4443333 34556777 689999999999999
Q ss_pred cCCC--C-cEEEEe
Q 017139 170 DPLT--H-QVKLCD 180 (376)
Q Consensus 170 ~~~~--~-~~kl~D 180 (376)
...+ . .+.|+|
T Consensus 152 ~~~~~~~~~lvlID 165 (199)
T PF10707_consen 152 QRRDSGEFRLVLID 165 (199)
T ss_pred EecCCCceEEEEEe
Confidence 5322 2 466665
No 469
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.72 E-value=0.00042 Score=60.63 Aligned_cols=31 Identities=39% Similarity=0.546 Sum_probs=25.3
Q ss_pred CCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 155 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 155 ~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.+++|+|+.+.||+++. +....|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~-~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQD-GRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEEC-CCEEEEEeCcccCc
Confidence 35899999999999984 55567999998753
No 470
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.72 E-value=0.00075 Score=58.98 Aligned_cols=69 Identities=17% Similarity=0.319 Sum_probs=44.5
Q ss_pred eeeeccCCceEEEEEEEcC-CCcEEEEEEecccc---cchHHHHHHHHhCCCCCeee-cceeeeecCCCCceeEEEEeec
Q 017139 39 ERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVIS-LKHCFFSTTSKDELFLNLVMEY 113 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~-~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~-~~~~~~~~~~~~~~~~~lv~e~ 113 (376)
.+.|..|-...+|++.... .++.|++|+..... ....+|..+++.+...+++. ++... .+ .++|||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~-----~~----~~l~e~ 73 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF-----QN----GLIYEF 73 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe-----CC----cEEEEe
Confidence 4678888889999997543 35688899775432 12346888888886544433 22211 11 279999
Q ss_pred ccc
Q 017139 114 VPE 116 (376)
Q Consensus 114 ~~g 116 (376)
++|
T Consensus 74 i~G 76 (235)
T cd05157 74 IPG 76 (235)
T ss_pred eCC
Confidence 886
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.67 E-value=0.00039 Score=61.70 Aligned_cols=134 Identities=19% Similarity=0.242 Sum_probs=73.3
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEeccccc----chHHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecccc
Q 017139 41 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE 116 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~----~~~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g 116 (376)
.+..|-.+.+|++. .+++.+++|....... ...+|..+++.+....+++-.-.. . . -++||||++|
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~-~---~----~~~v~e~i~G 72 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILV-N---E----HWLLVEWLEG 72 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEE-e---C----CEEEEEeccC
Confidence 45678888899887 3567888887644322 246788899988654443221111 1 1 2489999987
Q ss_pred hHHH---------------HHHhhhh---cCCCCCHH-HHHHHHHHH---------HHHHHHhHc-------CCCceecc
Q 017139 117 TMYR---------------VLKHYSS---MNQRMPLI-YVKLYTYQI---------FRGLAYIHT-------VPGVCHRD 161 (376)
Q Consensus 117 ~l~~---------------~l~~~~~---~~~~l~~~-~~~~i~~qi---------l~aL~~LH~-------~~~ivH~d 161 (376)
.... .+...-. ...+++.. .+..+..++ ...+..+-. ...++|+|
T Consensus 73 ~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~D 152 (256)
T TIGR02721 73 EVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMD 152 (256)
T ss_pred cccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCC
Confidence 3211 1111000 11112211 111221111 111221211 02489999
Q ss_pred CCCCCeeecCCCCcEEEEecCCccc
Q 017139 162 VKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 162 lkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+.|.||+++. ++ +.|+||..+..
T Consensus 153 l~~~Nil~~~-~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 153 VHAYNLVVTP-QG-LKLIDWEYASD 175 (256)
T ss_pred CCcCcEEEeC-CC-CEEEeccccCc
Confidence 9999999985 44 78999998764
No 472
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.61 E-value=0.00017 Score=67.97 Aligned_cols=173 Identities=20% Similarity=0.255 Sum_probs=110.1
Q ss_pred HHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcC
Q 017139 75 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 154 (376)
Q Consensus 75 ~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~ 154 (376)
.....+++.+.|+|.....++--. ......+|||+++-++.+.+.... +-.. +++ .
T Consensus 30 lgr~~~lktl~~~~l~~yl~~~r~----~~~r~IVV~e~~~~Sled~~~~~~-----l~~~-------s~~-------~- 85 (725)
T KOG1093|consen 30 LGRFQYLKSLQHDNLCQYLDFSRG----KHERVIVVMEHYTMSLEDILKTGN-----LKDE-------SLL-------A- 85 (725)
T ss_pred hhhhHHHHhhcCccceeeEeeecC----ccceEEEEehhhccchHHHHHhcc-----cchh-------hhc-------c-
Confidence 346788999999999988776421 122267999999998888776521 1100 111 1
Q ss_pred CCceeccCCCCCeeecCCCCcEEEEecCCccccccCCCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHHHhCC
Q 017139 155 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 234 (376)
Q Consensus 155 ~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~lltg~ 234 (376)
+++.|- |+ ++.+| .++.. | | ...++++||||+|.++.++.-|.
T Consensus 86 ~~~~~~-----~~--------~~~td-~~~t~---------------~--~------~~~~pKsdVwsl~~i~~el~L~~ 128 (725)
T KOG1093|consen 86 HGVLHL-----NI--------IYITD-HFLTK---------------Y--P------SPIGPKSDVWSLGFIILELYLGI 128 (725)
T ss_pred ccccee-----hh--------hhccc-ccccc---------------C--C------CCCCcchhhhhHHHHHHHHHHhh
Confidence 233222 22 23333 00000 0 1 01235999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCCHHHH
Q 017139 235 PLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 314 (376)
Q Consensus 235 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el 314 (376)
..+......+.+..+.+....+.....-.+ .+ .+.-.++....++..+|+-..|..||...++
T Consensus 129 ~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~----------------e~-~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~ 191 (725)
T KOG1093|consen 129 SLEAELTESEYLEILLKYYTDDQELLSTAM----------------EH-LIQLLADKKRLPLLKKCLWLEPIIRPLPMEL 191 (725)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhHHHHHH----------------HH-HHHHhhhHhHHHHhccCCccccccccchhHH
Confidence 998887777777666664433322111100 00 1222457788899999999999999999999
Q ss_pred hCCCccccccC
Q 017139 315 CAHPFFDELRE 325 (376)
Q Consensus 315 l~hp~~~~~~~ 325 (376)
..|+-|.++..
T Consensus 192 ~k~~i~~ev~~ 202 (725)
T KOG1093|consen 192 SKRCSFTEVYK 202 (725)
T ss_pred hcCccHHHHHh
Confidence 99999988744
No 473
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.55 E-value=4.2e-05 Score=80.23 Aligned_cols=213 Identities=16% Similarity=0.023 Sum_probs=140.3
Q ss_pred HHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeeccc-chHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCC
Q 017139 77 ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 155 (376)
Q Consensus 77 e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~ 155 (376)
|++.++...|+++...+.-... ......|..++||. |.+.+.+.........+....+.....+.+.+..-+|+..
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~p---s~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPP---SESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhceeeecccccCCC---CCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 4445556788888776544322 33444678999998 5666777666555666666666655555577777777653
Q ss_pred C----ceeccCCCCCeeecCCCCcEEEEecCCccccccC-CCcceeeccccccChhhhhCCCCCCccchhHHHHHHHHHH
Q 017139 156 G----VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-EANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAEL 230 (376)
Q Consensus 156 ~----ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 230 (376)
+ -+|++||+-|.++.. +..+|+.++|+.+...+. .......|++.|+.|++... ..++.++|+|..|+.+|..
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVt-ny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVT-NYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cCCccchhhhhhhhccceec-CCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHH
Confidence 4 478999999999986 777999999999843322 33345678889999998754 3478889999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhcCcCCcCccCCCCCCCCcccccccCCChhHHHHHHhhcCCCCCCCCC
Q 017139 231 LLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 310 (376)
Q Consensus 231 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 310 (376)
..|..+|.. .++...+. .-.+...+.++ ...|.++-.....+|-+.-..||.
T Consensus 1434 s~~n~~fi~-----flq~~Lkg-----------iidn~tf~sIe------------~l~pgdaNve~~~~Ll~K~~~rp~ 1485 (2724)
T KOG1826|consen 1434 SDGNAYFIF-----FLQPALKG-----------IIDNHTFFSIE------------KLKPGDANVEALHRLLWKYMERPG 1485 (2724)
T ss_pred hcccHHHHH-----HHHHHHcC-----------ccccccccccc------------ccCCCcccHHHHHHHHHHhhhcch
Confidence 998887732 22222221 11111111111 122444445555556666678898
Q ss_pred HHHHhCCCcccc
Q 017139 311 ALEACAHPFFDE 322 (376)
Q Consensus 311 ~~ell~hp~~~~ 322 (376)
-...+.-+.|.-
T Consensus 1486 q~isls~d~~a~ 1497 (2724)
T KOG1826|consen 1486 QYISLSRDHFAV 1497 (2724)
T ss_pred hhhhcccccccc
Confidence 888888777754
No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.47 E-value=0.0029 Score=59.44 Aligned_cols=71 Identities=23% Similarity=0.324 Sum_probs=46.3
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecc-----------cccchHHHHHHHHhCC---CCCeeecceeeeecCCCCc
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----------DRRYKNRELQLMRLMD---HPNVISLKHCFFSTTSKDE 104 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~-----------~~~~~~~e~~~l~~l~---h~~Iv~~~~~~~~~~~~~~ 104 (376)
.+.||.|.+..||++.....++.++||.-.. .......|.+.|+.+. ..++.+++++- ++.
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D-----~~~ 105 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD-----EEL 105 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC-----CCC
Confidence 4689999999999999864446899997431 1112345777777763 23455554432 222
Q ss_pred eeEEEEeecccc
Q 017139 105 LFLNLVMEYVPE 116 (376)
Q Consensus 105 ~~~~lv~e~~~g 116 (376)
.++|||++++
T Consensus 106 --~~lVME~L~~ 115 (401)
T PRK09550 106 --AVTVMEDLSD 115 (401)
T ss_pred --CEEEEecCCC
Confidence 4599999875
No 475
>PRK10593 hypothetical protein; Provisional
Probab=97.44 E-value=0.0037 Score=56.75 Aligned_cols=76 Identities=5% Similarity=-0.024 Sum_probs=49.3
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc--ccchHHHHHHHHhCCCC---CeeecceeeeecCCCCceeEEEEe
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRLMDHP---NVISLKHCFFSTTSKDELFLNLVM 111 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~e~~~l~~l~h~---~Iv~~~~~~~~~~~~~~~~~~lv~ 111 (376)
.-.+.||.|..+.||..... ++ .+++|..... ......|...++.+... .+.++++++... .....-++||
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~--~~~g~~~LVm 92 (297)
T PRK10593 17 SRVECISEQPYAALWALYDS-QG-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE--QSPGPDVLLL 92 (297)
T ss_pred heeeecCCccceeEEEEEcC-CC-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC--CcCCCeEEEE
Confidence 34678999999999998642 23 4677775442 23567899999988542 445555443211 1223367999
Q ss_pred ecccc
Q 017139 112 EYVPE 116 (376)
Q Consensus 112 e~~~g 116 (376)
|+++|
T Consensus 93 E~i~G 97 (297)
T PRK10593 93 ERLRG 97 (297)
T ss_pred eccCC
Confidence 99886
No 476
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.43 E-value=0.00012 Score=65.32 Aligned_cols=133 Identities=17% Similarity=0.176 Sum_probs=86.4
Q ss_pred ceEeeeeeccCCceEEEEEEEcCCCcEEEEEEecc----------c----------------ccchHHHHHHHHhCCC-C
Q 017139 35 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ----------D----------------RRYKNRELQLMRLMDH-P 87 (376)
Q Consensus 35 ~y~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~----------~----------------~~~~~~e~~~l~~l~h-~ 87 (376)
-|.++..||-|--+.+|.+-+ ..|++.++|.-.. . +....+|...|+.|.. -
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 367888999999999999986 4578888884311 1 1122368888887743 2
Q ss_pred C-eeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCC
Q 017139 88 N-VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQN 166 (376)
Q Consensus 88 ~-Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~N 166 (376)
+ +.+.+ +....++|||++.|--...+.+ ... ...+...+..-+.-|-. +|+||+|+.-=|
T Consensus 172 fpVPkpi---------D~~RH~Vvmelv~g~Pl~~v~~------v~d---~~~ly~~lm~~Iv~la~-~GlIHgDFNEFN 232 (465)
T KOG2268|consen 172 FPVPKPI---------DHNRHCVVMELVDGYPLRQVRH------VED---PPTLYDDLMGLIVRLAN-HGLIHGDFNEFN 232 (465)
T ss_pred CCCCCcc---------cccceeeHHHhhcccceeeeee------cCC---hHHHHHHHHHHHHHHHH-cCceecccchhe
Confidence 2 23332 2333789999998731111111 112 22334444455556667 799999999999
Q ss_pred eeecCCCCcEEEEecCCccccc
Q 017139 167 LLVDPLTHQVKLCDFGSAKVLV 188 (376)
Q Consensus 167 ill~~~~~~~kl~Dfg~~~~~~ 188 (376)
|+++. ++.++++||--+....
T Consensus 233 imv~d-d~~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 233 IMVKD-DDKIVVIDFPQMVSTS 253 (465)
T ss_pred eEEec-CCCEEEeechHhhccC
Confidence 99995 7779999998765443
No 477
>PRK05231 homoserine kinase; Provisional
Probab=97.36 E-value=0.0028 Score=58.13 Aligned_cols=30 Identities=30% Similarity=0.331 Sum_probs=25.4
Q ss_pred CCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 155 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 155 ~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.++||+|+.|.||+++. +...-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEG-DRLSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEEC-CceEEEEeccccc
Confidence 48999999999999984 5545899999875
No 478
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.32 E-value=0.00091 Score=56.19 Aligned_cols=98 Identities=22% Similarity=0.219 Sum_probs=74.0
Q ss_pred HHHHHHHhCCC-CCeeecceeeeecCCCCceeEEEEeecccc-hHHHH---HHhhhhcCCCCCHHHHHHHHHHHHHHHHH
Q 017139 76 RELQLMRLMDH-PNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRV---LKHYSSMNQRMPLIYVKLYTYQIFRGLAY 150 (376)
Q Consensus 76 ~e~~~l~~l~h-~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g-~l~~~---l~~~~~~~~~l~~~~~~~i~~qil~aL~~ 150 (376)
.|.-+++.+.+ +++.++++.+ . .++|.||.+. +++.. +.+ --..++..+.+|+.+++..+++
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C-----G----~~~v~E~~~~~~~~~~~~~l~~----~~~~~w~~R~~iA~~lL~~l~~ 74 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC-----G----RFYVVEYVGAGSLYGIYRPLSQ----FLQSPWEQRAKIALQLLELLEE 74 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC-----C----CEEEEEeecCcccccccccccc----ccccCHHHHHHHHHHHHHHHHH
Confidence 47888888876 6899998877 2 3579999984 33211 111 1236788899999999999999
Q ss_pred hHcC--CCceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 151 IHTV--PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 151 LH~~--~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++.. ..+.-.|++++|+-++. ++++|++|...+...
T Consensus 75 l~~~~~~~~~lcDv~~~nfgv~~-~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 75 LDHGPLGFFYLCDVSPDNFGVND-DGRLKLIDLDDVFVE 112 (188)
T ss_pred HhcCCCCcEEEeecchHHeEEeC-CCcEEEEechhcchh
Confidence 9972 13566899999999995 788999999876543
No 479
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.24 E-value=0.0041 Score=56.80 Aligned_cols=146 Identities=15% Similarity=0.066 Sum_probs=76.3
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc--ccchHHHHHHHHhCCCCC--eeecceeeeec-CCCCceeEEEEe
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD--RRYKNRELQLMRLMDHPN--VISLKHCFFST-TSKDELFLNLVM 111 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~e~~~l~~l~h~~--Iv~~~~~~~~~-~~~~~~~~~lv~ 111 (376)
...+.++.|....+|++.. . +..+++|+.... ......|.+++..|.... +.+++...-.. ....+...++++
T Consensus 25 ~~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred eeccccCCccccceEEEEe-C-CCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 3466778888889998874 3 336788877543 223345677777774322 22322211000 001234467999
Q ss_pred ecccchH-----H-------HHH---Hhhhhc-CCC----CCHHHHH---------------HHHHHHHHHHHHhHc---
Q 017139 112 EYVPETM-----Y-------RVL---KHYSSM-NQR----MPLIYVK---------------LYTYQIFRGLAYIHT--- 153 (376)
Q Consensus 112 e~~~g~l-----~-------~~l---~~~~~~-~~~----l~~~~~~---------------~i~~qil~aL~~LH~--- 153 (376)
+|++|.. . ..+ +..... ... ....... .....+...++++..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 9987621 0 111 110000 000 0000000 001112233444432
Q ss_pred ---CCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 154 ---VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 154 ---~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
..+++|+|+.+.||+++. ++.+.|+||+.+.
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~~-~~~~~vIDfd~~~ 216 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFDG-DSVKGVIDFYFAC 216 (307)
T ss_pred hcCCCccCCCCCCcCcEEEEC-CceEEEeeccccc
Confidence 158999999999999986 5556899999874
No 480
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.24 E-value=0.0039 Score=56.51 Aligned_cols=144 Identities=14% Similarity=0.025 Sum_probs=76.2
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecc-cccchHHHHHHHHhCCCCC--eeecceeeeec-CCCCceeEEEEeecc
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-DRRYKNRELQLMRLMDHPN--VISLKHCFFST-TSKDELFLNLVMEYV 114 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~-~~~~~~~e~~~l~~l~h~~--Iv~~~~~~~~~-~~~~~~~~~lv~e~~ 114 (376)
.+.+..|....+|++.. .+..+++|+... .......|..+++.+.+.+ +.+++...-.. ........++|++++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i 96 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL 96 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence 56788888889998864 345788998764 2233456888888775433 33332210000 001123357899999
Q ss_pred cchHH------------HHH---Hhhhhc-CCC----CCHHHHHH------------HHHHHHHHHHHhHc------CCC
Q 017139 115 PETMY------------RVL---KHYSSM-NQR----MPLIYVKL------------YTYQIFRGLAYIHT------VPG 156 (376)
Q Consensus 115 ~g~l~------------~~l---~~~~~~-~~~----l~~~~~~~------------i~~qil~aL~~LH~------~~~ 156 (376)
+|... ..+ +..... ... ........ ....+..++.++.. ..+
T Consensus 97 ~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (296)
T cd05153 97 AGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRG 176 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCc
Confidence 86211 111 110000 000 00000000 01112223333332 137
Q ss_pred ceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 157 VCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 157 ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
++|+|+.|.||+++. ++.+.|+||+.+.
T Consensus 177 l~HgD~~~~Nil~~~-~~~~~iIDfe~a~ 204 (296)
T cd05153 177 VIHADLFRDNVLFDG-DELSGVIDFYFAC 204 (296)
T ss_pred CCccCcCcccEEEeC-CceEEEeehhhhc
Confidence 999999999999985 6656899999875
No 481
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.96 E-value=0.019 Score=52.27 Aligned_cols=69 Identities=17% Similarity=0.249 Sum_probs=42.8
Q ss_pred eeeeccCCceEEEEEEEcC------CCcEEEEEEecccc---cchHHHHHHHHhCCCCCeee-cceeeeecCCCCceeEE
Q 017139 39 ERVVGTGSFGIVFQAKCLE------TGETVAIKKVLQDR---RYKNRELQLMRLMDHPNVIS-LKHCFFSTTSKDELFLN 108 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~------~~~~~aiK~~~~~~---~~~~~e~~~l~~l~h~~Iv~-~~~~~~~~~~~~~~~~~ 108 (376)
++.|..|-...+|++.... .++.+++|+..... ....+|..+++.+....+.+ ++..+ .+ .
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~-----~~----~ 73 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIF-----PN----G 73 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEe-----CC----C
Confidence 3566777777888887533 25789999876542 23457888888886544432 22222 11 1
Q ss_pred EEeecccc
Q 017139 109 LVMEYVPE 116 (376)
Q Consensus 109 lv~e~~~g 116 (376)
+|+||++|
T Consensus 74 ~v~e~i~G 81 (302)
T cd05156 74 RIEEFIPS 81 (302)
T ss_pred chhheeCC
Confidence 57888775
No 482
>PLN02236 choline kinase
Probab=96.92 E-value=0.019 Score=53.29 Aligned_cols=141 Identities=16% Similarity=0.241 Sum_probs=76.3
Q ss_pred eEeeeeeccCCceEEEEEEEcC----CCcEEEEEEeccccc---chHHHHHHHHhCCCCCeee-cceeeeecCCCCceeE
Q 017139 36 YMAERVVGTGSFGIVFQAKCLE----TGETVAIKKVLQDRR---YKNRELQLMRLMDHPNVIS-LKHCFFSTTSKDELFL 107 (376)
Q Consensus 36 y~~~~~Lg~G~~g~V~~~~~~~----~~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~-~~~~~~~~~~~~~~~~ 107 (376)
..-...|..|-...+|++.... .++.|++|+...... ....|..+++.+..-++.+ +++.+ .+.
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~-----~~g--- 109 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRF-----PNG--- 109 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEE-----CCc---
Confidence 3344566668888999987432 246899998754322 2346888888886544432 33333 211
Q ss_pred EEEeecccch-HH--------------HHHHhhhhcC---C--CCCHHHHHHHHHHH-----------------HHHHHH
Q 017139 108 NLVMEYVPET-MY--------------RVLKHYSSMN---Q--RMPLIYVKLYTYQI-----------------FRGLAY 150 (376)
Q Consensus 108 ~lv~e~~~g~-l~--------------~~l~~~~~~~---~--~l~~~~~~~i~~qi-----------------l~aL~~ 150 (376)
.|++|++|. +. ..+...-... . ......+..++.++ ...+..
T Consensus 110 -~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 188 (344)
T PLN02236 110 -RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINL 188 (344)
T ss_pred -eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHH
Confidence 467777642 11 0111100001 0 11122222332211 111111
Q ss_pred ----h----HcCCCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 151 ----I----HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 151 ----L----H~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
+ +. ..++|+|+++.||+++..++.+.++||..+..
T Consensus 189 L~~~~~~~~~~-~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 189 LEKELSGDDQE-IGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHHHhcccCCC-ceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1 12 25899999999999985456799999998754
No 483
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.86 E-value=0.015 Score=53.63 Aligned_cols=30 Identities=20% Similarity=0.334 Sum_probs=25.9
Q ss_pred ceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 157 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 157 ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
++|+|+.+.||+++.+++.++++||..|..
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 699999999999975456799999998754
No 484
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.81 E-value=0.024 Score=51.71 Aligned_cols=29 Identities=31% Similarity=0.618 Sum_probs=24.8
Q ss_pred CCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 155 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 155 ~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
.+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~--~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD--NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC--CcEEEEECcccc
Confidence 47899999999999984 458999999764
No 485
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.65 E-value=0.037 Score=51.06 Aligned_cols=69 Identities=23% Similarity=0.249 Sum_probs=42.2
Q ss_pred eeccCCceEEEEEEEcCCCcEEEEEEecc-----------cccchHHHHHHHHhCC--CC-CeeecceeeeecCCCCcee
Q 017139 41 VVGTGSFGIVFQAKCLETGETVAIKKVLQ-----------DRRYKNRELQLMRLMD--HP-NVISLKHCFFSTTSKDELF 106 (376)
Q Consensus 41 ~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~-----------~~~~~~~e~~~l~~l~--h~-~Iv~~~~~~~~~~~~~~~~ 106 (376)
.+|.|....||++.....++.++||.-.. +......|...|+... .| ++.+++++ ..+ .
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~------D~e-~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF------DTE-M 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE------ccc-c
Confidence 57999999999999754446899995321 1122335777777664 24 34444332 111 2
Q ss_pred EEEEeecccc
Q 017139 107 LNLVMEYVPE 116 (376)
Q Consensus 107 ~~lv~e~~~g 116 (376)
..+|||+++.
T Consensus 75 ~~~vMEdL~~ 84 (370)
T TIGR01767 75 AVTVMEDLSH 84 (370)
T ss_pred ceehHhhCcc
Confidence 4499999863
No 486
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.56 E-value=0.02 Score=53.50 Aligned_cols=71 Identities=20% Similarity=0.263 Sum_probs=45.0
Q ss_pred eeeeccCCceEEEEEEEcCCCcEEEEEEecc----------cccchHHHHHHHHhCC--CCC-eeecceeeeecCCCCce
Q 017139 39 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQ----------DRRYKNRELQLMRLMD--HPN-VISLKHCFFSTTSKDEL 105 (376)
Q Consensus 39 ~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~----------~~~~~~~e~~~l~~l~--h~~-Iv~~~~~~~~~~~~~~~ 105 (376)
.+.||.|--..||++.+...++.++||.-.. +......|.+.|+... .|. +.+++. + ..+
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~-~-----D~e- 106 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL-F-----DSV- 106 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE-E-----CcH-
Confidence 6788999999999999854457899995321 1122345788887764 343 444433 2 112
Q ss_pred eEEEEeecccc
Q 017139 106 FLNLVMEYVPE 116 (376)
Q Consensus 106 ~~~lv~e~~~g 116 (376)
...+|||+++.
T Consensus 107 ~~~~vMEdL~~ 117 (409)
T PRK12396 107 MNCCVMEDLSD 117 (409)
T ss_pred HhhHHHHhCcc
Confidence 24489999863
No 487
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.34 E-value=0.07 Score=48.49 Aligned_cols=30 Identities=30% Similarity=0.551 Sum_probs=26.2
Q ss_pred ceeccCCCCCeeecCCCCcEEEEecCCcccc
Q 017139 157 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 187 (376)
Q Consensus 157 ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~~ 187 (376)
++|+|+.+.|++++. +.-+-|.||+.+..-
T Consensus 200 lvHGD~~~gNlii~~-~~~~gVlDwe~~~lG 229 (321)
T COG3173 200 LVHGDYRPGNLIIDP-GRPTGVLDWELATLG 229 (321)
T ss_pred eeeCCcccCCEEEeC-CCeeEEEeccccccC
Confidence 899999999999997 555999999998754
No 488
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.24 E-value=0.073 Score=50.05 Aligned_cols=70 Identities=19% Similarity=0.241 Sum_probs=45.0
Q ss_pred eeeeeccCCceEEEEEEEcCCCcEEEEEEecc-----------cccchHHHHHHHHhCC---CCCeeecceeeeecCCCC
Q 017139 38 AERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-----------DRRYKNRELQLMRLMD---HPNVISLKHCFFSTTSKD 103 (376)
Q Consensus 38 ~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~-----------~~~~~~~e~~~l~~l~---h~~Iv~~~~~~~~~~~~~ 103 (376)
..+.||.|....||++.+ .+..++||.-.. +......|...|+.+. ..++.+++.+. ++
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d-----ed 108 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFD-----RT 108 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC-----CC
Confidence 467889999999999986 345688996531 2222335667776654 23555565543 32
Q ss_pred ceeEEEEeecccc
Q 017139 104 ELFLNLVMEYVPE 116 (376)
Q Consensus 104 ~~~~~lv~e~~~g 116 (376)
. -+++||++++
T Consensus 109 ~--~vlvME~L~~ 119 (418)
T PLN02756 109 M--ALIGMRYLEP 119 (418)
T ss_pred C--CEEEEeecCC
Confidence 2 3488999976
No 489
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.10 E-value=0.11 Score=46.49 Aligned_cols=31 Identities=32% Similarity=0.500 Sum_probs=24.8
Q ss_pred CceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 156 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 156 ~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.++|+|++|.||+++.++...-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999985333457999998764
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.04 E-value=0.076 Score=48.49 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=26.7
Q ss_pred CCceeccCCCCCeeecCCCCcEEEEecCCccc
Q 017139 155 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 186 (376)
Q Consensus 155 ~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~~ 186 (376)
.+++|+|+.+.|++++. ++.+.++||..+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~-~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDE-TRGGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcC-CCCEEEEEhhhccc
Confidence 47999999999999986 66789999998754
No 491
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.56 E-value=0.032 Score=51.83 Aligned_cols=61 Identities=25% Similarity=0.270 Sum_probs=40.4
Q ss_pred EEEeecccc-hHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCC
Q 017139 108 NLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLT 173 (376)
Q Consensus 108 ~lv~e~~~g-~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~ 173 (376)
.++-+|..| ++...++. ...+++.++.++.-...|+--|--..+++|.|+.|.||++..+.
T Consensus 321 vl~E~~~~Gl~v~~~v~~-----~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKW-----KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK 382 (565)
T ss_pred eeeeeccccccHHhhhhc-----ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence 366667776 65555554 34555666666666666655444335899999999999996433
No 492
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.35 E-value=0.06 Score=49.31 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=56.9
Q ss_pred CCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHcCCCceeccCCCCCeeecCCCCcEEEEec
Q 017139 102 KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 181 (376)
Q Consensus 102 ~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~~ivH~dlkp~Nill~~~~~~~kl~Df 181 (376)
.+..+.|++|++-++.+. .++ ....+++..++.+.+..+.-+..--..-|||+...||||+ .|.|.|+||
T Consensus 296 de~~y~yl~~kdhgt~is-~ik-------~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId--~GnvtLIDf 365 (488)
T COG5072 296 DETLYLYLHFKDHGTPIS-IIK-------ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID--EGNVTLIDF 365 (488)
T ss_pred CCceEEEEEEecCCceee-eee-------cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee--cCceEEEEe
Confidence 566778899998766532 222 2345667788888888777776522578999999999998 667999999
Q ss_pred CCccccc
Q 017139 182 GSAKVLV 188 (376)
Q Consensus 182 g~~~~~~ 188 (376)
-+++...
T Consensus 366 klsRl~~ 372 (488)
T COG5072 366 KLSRLSY 372 (488)
T ss_pred eeeeccc
Confidence 9998543
No 493
>PTZ00384 choline kinase; Provisional
Probab=95.19 E-value=0.47 Score=44.64 Aligned_cols=28 Identities=29% Similarity=0.346 Sum_probs=23.7
Q ss_pred CceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 156 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 156 ~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
..+|.|+-+.||+.+ +..+.++||..|.
T Consensus 228 VfCHNDL~~gNIL~~--~~~l~lID~EYA~ 255 (383)
T PTZ00384 228 LFCHNDLFFTNILDF--NQGIYFIDFDFAG 255 (383)
T ss_pred eeeeccCCcccEEec--CCCEEEEEecccc
Confidence 579999999999986 4459999998775
No 494
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.18 E-value=0.13 Score=46.24 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=42.7
Q ss_pred EeeeeeccCCceEEEEEEEcCCCcEEEEEEeccc-ccchHHHHHHHHhCC---CCCeeecceeeeecCCCCceeEEEEee
Q 017139 37 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRLMD---HPNVISLKHCFFSTTSKDELFLNLVME 112 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~e~~~l~~l~---h~~Iv~~~~~~~~~~~~~~~~~~lv~e 112 (376)
+-.+.++.|....+|+.. .+++.+.+|+-... ......|.+-|+.|. --.+.+++.+... .+. -|+|||
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~---~~~--~fLlle 92 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEY---DDD--AFLLLE 92 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE----SSC--CEEEEE
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEee---cCC--ceEEEE
Confidence 345678999999999887 57888999987643 334667998888884 2334455554322 122 379999
Q ss_pred ccc
Q 017139 113 YVP 115 (376)
Q Consensus 113 ~~~ 115 (376)
|++
T Consensus 93 ~l~ 95 (288)
T PF03881_consen 93 FLE 95 (288)
T ss_dssp ---
T ss_pred eec
Confidence 986
No 495
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.84 E-value=0.17 Score=43.30 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=54.9
Q ss_pred HHHHHHHHhCCCCCeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHhHc-
Q 017139 75 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT- 153 (376)
Q Consensus 75 ~~e~~~l~~l~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~- 153 (376)
..+..++.++. .|+++. . .+...+.++.|+|..-- . .. . .++.-=+.+|...|+
T Consensus 106 ~nky~v~Armh--GilrL~------N-Dn~~~yGvIlE~Cy~~~--i----------~~---~-N~i~agi~~L~~fH~~ 160 (308)
T PF07387_consen 106 FNKYRVFARMH--GILRLK------N-DNNYKYGVILERCYKIK--I----------NF---S-NFITAGIKDLMDFHSE 160 (308)
T ss_pred hhhhhHHHHhh--heeEee------c-CCCceeEEEEeeccCcc--c----------ch---h-HHHHHhHHHHHHhhcc
Confidence 34666766653 466654 1 34445779999997420 0 00 1 122222567888883
Q ss_pred CCCceeccCCCCCeeecCCCCcEEEEecCCc
Q 017139 154 VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA 184 (376)
Q Consensus 154 ~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~ 184 (376)
..+.+|+|..|+||+-|+ .|.+||.|-+.-
T Consensus 161 ~~~~lHGD~np~NiM~D~-~G~lKlVDP~~L 190 (308)
T PF07387_consen 161 NQHCLHGDCNPDNIMCDK-FGYLKLVDPVCL 190 (308)
T ss_pred CCCeecCCCChhheeecC-CCCEEecChhhh
Confidence 357999999999999997 778999997753
No 496
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.41 E-value=0.037 Score=49.82 Aligned_cols=132 Identities=22% Similarity=0.231 Sum_probs=86.0
Q ss_pred EeeeeeccCCceEEEEEEEc-------C---CCcEEEEEEeccc--------------ccch----------------HH
Q 017139 37 MAERVVGTGSFGIVFQAKCL-------E---TGETVAIKKVLQD--------------RRYK----------------NR 76 (376)
Q Consensus 37 ~~~~~Lg~G~~g~V~~~~~~-------~---~~~~~aiK~~~~~--------------~~~~----------------~~ 76 (376)
.|..+|..|--+.|+-|.-- . ....+|||+++-. .++. ++
T Consensus 255 ~i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEk 334 (531)
T KOG2269|consen 255 SIDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEK 334 (531)
T ss_pred hhhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHH
Confidence 45678889999999887421 1 2346899976321 0111 12
Q ss_pred HHHHHHhC-----CCCCeeecceeeeecCCCCceeEEEEeecccchHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHh
Q 017139 77 ELQLMRLM-----DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 151 (376)
Q Consensus 77 e~~~l~~l-----~h~~Iv~~~~~~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~~L 151 (376)
|..-|.++ .+|-+|.+.. ..+||-|++.. .+..-.-.+-.++....+..-.|++.++.-|
T Consensus 335 EmhNL~RMq~~GlpcP~vV~lkk------------hvLVMsFiGd~---~~aAPkLK~v~l~d~E~~~aY~q~~~~M~~l 399 (531)
T KOG2269|consen 335 EMHNLSRMQKHGLPCPQVVKLKK------------HVLVMSFIGDQ---GLAAPKLKNVELTDDERRNAYDQVQSIMCRL 399 (531)
T ss_pred HHHHHHHHHhcCCCCCceeeeec------------ceEEEEeecCC---CCCCccccccccChHHHHHHHHHHHHHHHHH
Confidence 33333343 3677777644 34899998732 1112222345588888888888999888876
Q ss_pred HcCCCceeccCCCCCeeecCCCCcEEEEecCCcc
Q 017139 152 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 185 (376)
Q Consensus 152 H~~~~ivH~dlkp~Nill~~~~~~~kl~Dfg~~~ 185 (376)
-.-.-+||.||+--|+|... +.+-++|..-+.
T Consensus 400 Y~Ec~LVHADlSEyN~Lw~~--gKvw~IDVsQsv 431 (531)
T KOG2269|consen 400 YKECLLVHADLSEYNLLWTP--GKVWVIDVSQSV 431 (531)
T ss_pred HHhhheeecchhhhhheecC--CceEEEechhcc
Confidence 54267999999999999984 478899977653
No 497
>PHA03111 Ser/Thr kinase; Provisional
Probab=94.38 E-value=0.067 Score=48.31 Aligned_cols=63 Identities=19% Similarity=0.240 Sum_probs=36.8
Q ss_pred EEeecccchHHHHHH-hhhhcCCCCCHHHHHHHHHHHHHHHHHhHc---CCCceeccCCCCCeeecC
Q 017139 109 LVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQIFRGLAYIHT---VPGVCHRDVKPQNLLVDP 171 (376)
Q Consensus 109 lv~e~~~g~l~~~l~-~~~~~~~~l~~~~~~~i~~qil~aL~~LH~---~~~ivH~dlkp~Nill~~ 171 (376)
||++...++..+.-. .....+-.--.+.++.++.|++.-.-.+-. ...++|.||||+|||+-.
T Consensus 252 IIfPLArcSadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFd 318 (444)
T PHA03111 252 IIFPLARCSADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFD 318 (444)
T ss_pred EEEehhhcccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEec
Confidence 777776543222211 111112222345678888898765533322 136899999999999853
No 498
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=93.90 E-value=0.075 Score=50.44 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=23.4
Q ss_pred ceeccCCCCCeeecCCCC----cEEEEecCCccc
Q 017139 157 VCHRDVKPQNLLVDPLTH----QVKLCDFGSAKV 186 (376)
Q Consensus 157 ivH~dlkp~Nill~~~~~----~~kl~Dfg~~~~ 186 (376)
++|+||...|||.+.++. -..|+||-.+..
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~ 303 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHR 303 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhc
Confidence 699999999999987443 456888877654
No 499
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=93.10 E-value=0.11 Score=47.14 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=35.4
Q ss_pred EEeecccchHHHHHHh-hhhcCCCCCHHHHHHHHHHHHHHHHHhHc---CCCceeccCCCCCeeec
Q 017139 109 LVMEYVPETMYRVLKH-YSSMNQRMPLIYVKLYTYQIFRGLAYIHT---VPGVCHRDVKPQNLLVD 170 (376)
Q Consensus 109 lv~e~~~g~l~~~l~~-~~~~~~~l~~~~~~~i~~qil~aL~~LH~---~~~ivH~dlkp~Nill~ 170 (376)
||++...++..+.-.. ....+-.--.+.++.++.|++.-.--+-. ...++|.||||+|||+-
T Consensus 248 IIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiF 313 (434)
T PF05445_consen 248 IIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIF 313 (434)
T ss_pred EEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEe
Confidence 7888766543222111 11122223345677888887654311211 14689999999999984
No 500
>PTZ00296 choline kinase; Provisional
Probab=92.57 E-value=2.9 Score=40.18 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=42.7
Q ss_pred eeeeeccCCceEEEEEEEcCC--------CcEEEEEEeccccc---chHHHHHHHHhCCCCCeee-cceeeeecCCCCce
Q 017139 38 AERVVGTGSFGIVFQAKCLET--------GETVAIKKVLQDRR---YKNRELQLMRLMDHPNVIS-LKHCFFSTTSKDEL 105 (376)
Q Consensus 38 ~~~~Lg~G~~g~V~~~~~~~~--------~~~~aiK~~~~~~~---~~~~e~~~l~~l~h~~Iv~-~~~~~~~~~~~~~~ 105 (376)
-.+.|..|-.-.+|++..... ++.|.+++.-.... ....|..+++.+...+|-+ +++.+ .+
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f-----~g-- 181 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTF-----SG-- 181 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEe-----CC--
Confidence 566778888889999875422 56788888754321 2345788887776544433 33332 11
Q ss_pred eEEEEeecccc
Q 017139 106 FLNLVMEYVPE 116 (376)
Q Consensus 106 ~~~lv~e~~~g 116 (376)
+.|.||++|
T Consensus 182 --g~I~efi~g 190 (442)
T PTZ00296 182 --GRIEEWLYG 190 (442)
T ss_pred --CEEEEeeCC
Confidence 256777765
Done!