Query 017140
Match_columns 376
No_of_seqs 150 out of 1695
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:35:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.3 2.6E-10 9E-15 104.9 22.1 201 118-345 68-283 (315)
2 2woz_A Kelch repeat and BTB do 99.3 3E-10 1E-14 104.7 21.0 200 119-345 80-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.3 2.1E-10 7.2E-15 105.0 19.7 203 117-346 70-279 (306)
4 2vpj_A Kelch-like protein 12; 99.3 8.4E-10 2.9E-14 100.7 21.8 199 118-346 79-285 (301)
5 2xn4_A Kelch-like protein 2; s 99.2 8.5E-10 2.9E-14 100.8 21.0 201 118-346 78-283 (302)
6 1zgk_A Kelch-like ECH-associat 99.2 8.8E-10 3E-14 101.1 20.9 200 118-346 91-294 (308)
7 3ii7_A Kelch-like protein 7; p 99.2 1.9E-09 6.4E-14 98.7 20.7 200 118-346 25-232 (306)
8 2vpj_A Kelch-like protein 12; 99.2 5.2E-09 1.8E-13 95.4 23.2 201 118-346 32-238 (301)
9 1zgk_A Kelch-like ECH-associat 99.1 3.8E-09 1.3E-13 96.8 18.5 201 118-346 40-247 (308)
10 2xn4_A Kelch-like protein 2; s 99.1 1.3E-08 4.6E-13 92.7 21.6 199 118-346 31-236 (302)
11 4asc_A Kelch repeat and BTB do 99.1 2.4E-08 8.1E-13 91.7 21.8 203 118-346 14-228 (315)
12 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 3.8E-11 1.3E-15 79.8 2.0 46 7-52 5-50 (53)
13 2e31_A FBS1, F-box only protei 99.0 9E-11 3.1E-15 105.7 2.5 50 9-58 49-99 (297)
14 2woz_A Kelch repeat and BTB do 99.0 1.5E-07 5.2E-12 86.4 22.7 212 108-346 15-238 (318)
15 2uvk_A YJHT; unknown function, 98.9 7.2E-08 2.5E-12 90.0 19.9 218 106-346 17-301 (357)
16 2uvk_A YJHT; unknown function, 98.8 2.5E-07 8.5E-12 86.3 17.9 159 174-346 167-349 (357)
17 2zwa_A Leucine carboxyl methyl 98.7 7.3E-07 2.5E-11 90.9 19.1 204 118-348 413-644 (695)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.5 2.6E-05 9.1E-10 74.5 23.7 236 8-280 16-268 (445)
19 3v7d_B Cell division control p 98.4 6.6E-05 2.3E-09 71.9 24.0 42 11-52 15-57 (464)
20 2zwa_A Leucine carboxyl methyl 98.3 3.2E-05 1.1E-09 78.8 19.1 159 173-347 410-591 (695)
21 1k3i_A Galactose oxidase precu 98.2 2.8E-05 9.6E-10 78.7 17.2 203 118-346 220-448 (656)
22 1p22_A F-BOX/WD-repeat protein 98.2 4.9E-05 1.7E-09 72.5 16.8 46 10-55 10-59 (435)
23 1k3i_A Galactose oxidase precu 97.8 0.00015 5.1E-09 73.3 12.4 149 176-344 220-383 (656)
24 3l2o_B F-box only protein 4; s 97.8 2.5E-06 8.6E-11 76.0 -0.7 49 9-57 3-51 (312)
25 2ast_B S-phase kinase-associat 97.5 2E-05 6.8E-10 72.5 1.3 45 7-51 5-49 (336)
26 2p1m_B Transport inhibitor res 96.5 0.00044 1.5E-08 68.6 0.2 35 10-44 5-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.00064 2.2E-08 67.4 -0.1 34 11-44 13-47 (592)
28 4gga_A P55CDC, cell division c 93.5 4.6 0.00016 37.3 20.2 147 106-281 114-262 (420)
29 3jro_A Fusion protein of prote 89.8 18 0.00062 36.5 18.8 189 114-340 29-239 (753)
30 3q7m_A Lipoprotein YFGL, BAMB; 87.1 14 0.00047 33.3 14.3 141 175-346 63-214 (376)
31 2bkl_A Prolyl endopeptidase; m 85.9 29 0.001 34.4 20.0 196 118-346 203-404 (695)
32 3jrp_A Fusion protein of prote 84.1 22 0.00074 31.4 19.7 187 114-341 31-242 (379)
33 4e54_B DNA damage-binding prot 83.6 22 0.00076 32.7 14.1 138 114-280 140-282 (435)
34 1yr2_A Prolyl oligopeptidase; 82.7 42 0.0014 33.6 22.8 168 151-345 271-447 (741)
35 3ei3_B DNA damage-binding prot 82.6 26 0.0009 31.3 21.6 184 114-342 94-285 (383)
36 3g4e_A Regucalcin; six bladed 77.8 34 0.0012 29.6 21.8 187 118-347 36-238 (297)
37 4aez_A CDC20, WD repeat-contai 76.8 43 0.0015 30.3 19.5 141 108-280 104-248 (401)
38 3q7m_A Lipoprotein YFGL, BAMB; 76.2 43 0.0015 29.9 16.0 115 200-345 47-168 (376)
39 4ggc_A P55CDC, cell division c 73.3 43 0.0015 28.6 19.9 66 106-186 34-100 (318)
40 3hfq_A Uncharacterized protein 71.3 53 0.0018 28.7 13.9 120 206-345 50-178 (347)
41 2z2n_A Virginiamycin B lyase; 70.6 48 0.0016 28.0 18.9 187 107-343 108-299 (299)
42 3scy_A Hypothetical bacterial 69.9 58 0.002 28.7 16.2 109 224-346 234-346 (361)
43 3u4y_A Uncharacterized protein 69.1 56 0.0019 28.2 19.5 184 114-342 18-210 (331)
44 3azo_A Aminopeptidase; POP fam 68.2 91 0.0031 30.3 17.2 194 117-346 161-376 (662)
45 3dwl_C Actin-related protein 2 66.0 70 0.0024 28.2 12.7 135 118-279 34-176 (377)
46 3dsm_A Uncharacterized protein 65.1 72 0.0025 28.0 16.2 187 117-344 17-217 (328)
47 3mbr_X Glutamine cyclotransfer 64.9 66 0.0023 27.5 15.5 116 201-348 24-143 (243)
48 1kv9_A Type II quinohemoprotei 63.9 1E+02 0.0036 30.4 13.7 125 200-346 60-194 (668)
49 3e5z_A Putative gluconolactona 63.8 59 0.002 27.7 10.8 58 206-278 38-97 (296)
50 3hfq_A Uncharacterized protein 62.0 80 0.0027 27.5 18.2 193 118-346 19-227 (347)
51 2hqs_A Protein TOLB; TOLB, PAL 61.0 99 0.0034 28.2 17.8 185 118-346 204-394 (415)
52 3v65_B Low-density lipoprotein 61.0 97 0.0033 28.1 19.8 129 108-265 87-221 (386)
53 3nol_A Glutamine cyclotransfer 59.9 86 0.0029 27.1 13.6 114 203-348 49-165 (262)
54 3no2_A Uncharacterized protein 59.6 84 0.0029 26.9 12.4 148 174-347 14-163 (276)
55 2ad6_A Methanol dehydrogenase 59.5 1E+02 0.0036 29.8 12.6 125 200-346 56-192 (571)
56 3hrp_A Uncharacterized protein 58.3 1.1E+02 0.0038 27.9 13.1 112 206-345 141-255 (409)
57 1rwi_B Serine/threonine-protei 57.7 81 0.0028 26.1 12.4 156 151-344 27-185 (270)
58 2fp8_A Strictosidine synthase; 56.6 99 0.0034 26.8 12.0 52 224-279 261-312 (322)
59 3o4h_A Acylamino-acid-releasin 56.6 1.2E+02 0.004 29.0 12.4 184 118-345 133-320 (582)
60 1yiq_A Quinohemoprotein alcoho 56.5 1.5E+02 0.005 29.5 13.3 124 199-344 63-197 (689)
61 1l0q_A Surface layer protein; 55.3 1.1E+02 0.0038 27.0 19.8 178 115-344 11-194 (391)
62 3no2_A Uncharacterized protein 54.4 1E+02 0.0035 26.3 12.1 183 117-345 15-201 (276)
63 1k8k_C P40, ARP2/3 complex 41 52.5 1.2E+02 0.004 26.4 19.4 138 114-279 28-172 (372)
64 3dr2_A Exported gluconolactona 52.1 1.1E+02 0.0039 26.2 10.6 116 206-346 55-185 (305)
65 4gqb_B Methylosome protein 50; 50.4 1.3E+02 0.0046 26.5 11.9 134 118-280 193-331 (344)
66 3nok_A Glutaminyl cyclase; bet 49.9 1.3E+02 0.0044 26.1 12.9 114 201-349 58-175 (268)
67 1evh_A WH1 domain, protein (ME 49.6 26 0.00089 26.0 4.9 41 118-168 12-52 (112)
68 2dg1_A DRP35, lactonase; beta 48.9 1.3E+02 0.0044 25.9 13.4 117 206-345 55-177 (333)
69 3bws_A Protein LP49; two-domai 48.6 1.5E+02 0.0051 26.5 16.3 111 206-343 133-247 (433)
70 4g56_B MGC81050 protein; prote 48.4 1.1E+02 0.0038 27.0 10.1 135 118-281 205-344 (357)
71 3bws_A Protein LP49; two-domai 48.4 1.5E+02 0.0052 26.5 18.1 186 115-344 190-395 (433)
72 3m0c_C LDL receptor, low-densi 46.9 2.5E+02 0.0084 28.5 17.5 158 151-342 474-635 (791)
73 1rwi_B Serine/threonine-protei 46.8 1.2E+02 0.0041 25.0 15.5 184 108-341 77-266 (270)
74 3dsm_A Uncharacterized protein 46.5 1.5E+02 0.0051 25.9 21.6 182 118-343 65-257 (328)
75 1flg_A Protein (quinoprotein e 45.2 2.2E+02 0.0075 27.5 14.8 126 200-346 62-200 (582)
76 2hqs_A Protein TOLB; TOLB, PAL 44.9 1.8E+02 0.0061 26.4 16.9 186 117-345 159-350 (415)
77 1q7f_A NHL, brain tumor CG1071 44.1 1.4E+02 0.0048 24.9 19.9 185 118-347 52-246 (286)
78 1ddw_A GLGF-domain protein hom 43.9 48 0.0016 24.9 5.6 39 118-168 12-51 (120)
79 3v9f_A Two-component system se 43.8 2.6E+02 0.0088 27.9 18.6 184 118-346 428-618 (781)
80 1kb0_A Quinohemoprotein alcoho 43.5 2.5E+02 0.0086 27.7 13.7 126 200-346 71-206 (677)
81 1k8k_C P40, ARP2/3 complex 41 43.1 1.6E+02 0.0056 25.4 11.9 50 224-279 31-82 (372)
82 3iuj_A Prolyl endopeptidase; h 41.4 2.7E+02 0.0091 27.4 21.4 167 151-346 237-412 (693)
83 2qc5_A Streptogramin B lactona 40.7 1.6E+02 0.0054 24.5 13.1 192 107-348 71-268 (300)
84 4gqb_B Methylosome protein 50; 40.4 1.9E+02 0.0065 25.4 14.2 184 112-344 99-294 (344)
85 3jrp_A Fusion protein of prote 39.8 1.8E+02 0.0063 25.0 18.5 191 113-346 76-295 (379)
86 1l0q_A Surface layer protein; 39.2 2E+02 0.0067 25.2 19.0 178 114-342 52-236 (391)
87 2ovr_B FBW7, F-BOX/WD repeat p 38.9 2.2E+02 0.0075 25.7 21.4 141 174-340 298-443 (445)
88 2ojh_A Uncharacterized protein 38.5 1.6E+02 0.0056 24.1 20.9 186 117-345 22-212 (297)
89 3scy_A Hypothetical bacterial 38.0 2E+02 0.0069 25.0 20.5 197 118-346 30-249 (361)
90 3bg1_A Protein SEC13 homolog; 37.7 1.9E+02 0.0067 24.7 17.0 64 112-189 77-142 (316)
91 2aq5_A Coronin-1A; WD40 repeat 36.6 2.3E+02 0.0077 25.1 20.1 198 113-347 101-309 (402)
92 3v64_C Agrin; beta propeller, 34.9 2.4E+02 0.0082 24.9 22.2 129 108-265 44-178 (349)
93 1gxr_A ESG1, transducin-like e 34.8 2.1E+02 0.007 24.1 20.2 180 113-344 116-301 (337)
94 3dr2_A Exported gluconolactona 34.7 2.1E+02 0.0073 24.3 10.7 102 118-243 170-278 (305)
95 3vgz_A Uncharacterized protein 34.7 2.2E+02 0.0074 24.4 23.1 189 118-344 112-308 (353)
96 1egx_A VAsp, vasodilator-stimu 33.9 49 0.0017 24.7 4.2 41 118-168 12-53 (115)
97 1w6s_A Methanol dehydrogenase 33.1 3.5E+02 0.012 26.3 13.1 119 200-344 56-196 (599)
98 3dwl_C Actin-related protein 2 31.9 1.5E+02 0.0052 25.8 8.2 139 174-340 32-178 (377)
99 1ri6_A Putative isomerase YBHE 31.3 2.4E+02 0.0082 23.8 16.7 152 174-347 150-318 (343)
100 2z2n_A Virginiamycin B lyase; 31.0 2.3E+02 0.0077 23.5 13.1 108 206-346 25-135 (299)
101 2ecf_A Dipeptidyl peptidase IV 30.3 3.9E+02 0.013 26.0 17.6 142 118-280 264-413 (741)
102 3sfz_A APAF-1, apoptotic pepti 30.1 5E+02 0.017 27.2 14.8 188 113-345 634-834 (1249)
103 1i2h_A PSD-ZIP45(homer-1C/VESL 30.1 81 0.0028 25.2 5.1 39 118-168 17-56 (168)
104 3p5b_L Low density lipoprotein 29.8 3.1E+02 0.011 24.8 18.0 125 112-265 88-221 (400)
105 2lyd_A Decapping protein 1; DC 29.4 59 0.002 25.0 4.1 30 318-351 30-59 (134)
106 2kwv_A RAD30 homolog B, DNA po 28.7 30 0.001 21.0 1.8 17 12-28 22-38 (48)
107 2xe4_A Oligopeptidase B; hydro 28.4 4.5E+02 0.015 26.1 17.0 121 206-346 330-465 (751)
108 3jro_A Fusion protein of prote 28.4 4.4E+02 0.015 26.0 13.3 94 224-340 32-133 (753)
109 2jp2_A Spred-2, sprouty-relate 27.7 66 0.0022 24.4 4.1 41 118-168 21-65 (126)
110 1ri6_A Putative isomerase YBHE 26.7 2.9E+02 0.0098 23.3 22.3 106 224-346 152-271 (343)
111 3sjl_D Methylamine dehydrogena 26.2 3.7E+02 0.013 24.4 11.9 121 206-350 237-375 (386)
112 4g56_B MGC81050 protein; prote 26.0 3.3E+02 0.011 23.8 16.5 179 113-341 158-345 (357)
113 2iwa_A Glutamine cyclotransfer 25.8 3.1E+02 0.011 23.4 14.1 111 207-348 32-145 (266)
114 1pjx_A Dfpase, DIISOPROPYLFLUO 25.8 2.9E+02 0.01 23.1 21.4 196 118-346 47-264 (314)
115 1ijq_A LDL receptor, low-densi 25.6 3.3E+02 0.011 23.5 22.5 125 112-265 6-139 (316)
116 3mbr_X Glutamine cyclotransfer 25.4 3.1E+02 0.011 23.2 19.9 164 151-350 24-191 (243)
117 3nol_A Glutamine cyclotransfer 24.8 3.3E+02 0.011 23.3 17.6 161 151-348 46-211 (262)
118 1npe_A Nidogen, entactin; glyc 24.7 3E+02 0.01 22.7 20.4 183 118-346 59-246 (267)
119 3p5b_L Low density lipoprotein 24.3 4E+02 0.014 24.1 15.1 100 151-265 205-308 (400)
120 1xod_A Spred1; sprouty, EVH1, 24.0 57 0.0019 24.4 3.1 40 118-168 12-56 (118)
121 3fvz_A Peptidyl-glycine alpha- 23.5 3.5E+02 0.012 23.2 11.6 139 118-279 70-226 (329)
122 3syx_A Sprouty-related, EVH1 d 23.4 1.3E+02 0.0044 22.9 4.9 13 118-130 19-31 (130)
123 1flg_A Protein (quinoprotein e 23.3 2.8E+02 0.0094 26.8 8.7 79 176-266 467-548 (582)
124 3v65_B Low-density lipoprotein 23.1 4.1E+02 0.014 23.8 18.3 183 118-346 139-326 (386)
125 2z3z_A Dipeptidyl aminopeptida 23.1 5.1E+02 0.018 24.9 23.5 192 117-342 235-438 (706)
126 2ojh_A Uncharacterized protein 23.1 3E+02 0.01 22.3 17.6 195 112-346 58-265 (297)
127 1q67_A Decapping protein invol 23.0 87 0.003 26.0 4.1 30 318-351 36-65 (231)
128 3pe7_A Oligogalacturonate lyas 22.4 3.8E+02 0.013 23.2 15.2 113 117-242 168-284 (388)
129 3kvp_A Uncharacterized protein 21.8 76 0.0026 21.1 2.9 19 328-346 38-56 (72)
130 3nok_A Glutaminyl cyclase; bet 21.1 4E+02 0.014 22.9 15.5 141 176-349 76-221 (268)
131 2p4o_A Hypothetical protein; p 20.6 3.9E+02 0.013 22.6 14.9 108 206-342 42-150 (306)
132 2hes_X YDR267CP; beta-propelle 20.5 4E+02 0.014 22.7 11.2 52 224-280 272-328 (330)
133 3mkq_A Coatomer beta'-subunit; 20.4 6.1E+02 0.021 24.8 19.8 179 113-343 74-263 (814)
134 3u6x_S ORF48; helix/beta, rece 20.0 2.3E+02 0.0077 19.6 6.1 44 288-344 56-99 (105)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.32 E-value=2.6e-10 Score=104.93 Aligned_cols=201 Identities=9% Similarity=0.059 Sum_probs=130.0
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-Eee--cCCCCCcEEEEEeCCCceEECcCCC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWA--IPGRDPEYRIFELGTNSWRPLKGGP 194 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~--~~~~~~~~~vyss~~~~W~~~~~~~ 194 (376)
.++++||.|++|. .+ |+.+..+........ .+...|++ ... .......+++|+..+++|+.+...+
T Consensus 68 ~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 136 (315)
T 4asc_A 68 YFLQFDHLDSEWL------GM--PPLPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP 136 (315)
T ss_dssp EEEEEETTTTEEE------EC--CCBSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS
T ss_pred ceEEecCCCCeEE------EC--CCCCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC
Confidence 4899999999999 66 555433222122222 22223333 221 1234678999999999999998777
Q ss_pred CccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCCeE
Q 017140 195 NYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDATM 273 (376)
Q Consensus 195 ~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l 273 (376)
..+....++.++|++|.+++..........+..||+.+.+|+.++ +|.... ....+..+|+|+++.........-
T Consensus 137 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~ 212 (315)
T 4asc_A 137 YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS----LFGATVHDGRIIVAAGVTDTGLTS 212 (315)
T ss_dssp SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB----SCEEEEETTEEEEEEEECSSSEEE
T ss_pred CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh----ceEEEEECCEEEEEeccCCCCccc
Confidence 665567788899999999986322211247999999999999984 454332 445677899999998754333344
Q ss_pred EEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc-----------CCCcEEEEEeCCCCcE
Q 017140 274 TIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV-----------SDSVYVIHYDVVNRSM 342 (376)
Q Consensus 274 ~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~-----------~~~~~l~~ydl~t~~~ 342 (376)
++|+++ ...+.|+.+. .+|.. ... ..++..+|.|+++.-.. .....+..||+++++|
T Consensus 213 ~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 213 SAEVYS-ITDNKWAPFE-AFPQE----RSS------LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEEEEE-TTTTEEEEEC-CCSSC----CBS------CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred eEEEEE-CCCCeEEECC-CCCCc----ccc------eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 678875 3456899974 45532 111 11222366777764210 0124589999999999
Q ss_pred EEE
Q 017140 343 RRA 345 (376)
Q Consensus 343 ~~v 345 (376)
+.+
T Consensus 281 ~~~ 283 (315)
T 4asc_A 281 EGV 283 (315)
T ss_dssp EEE
T ss_pred hhh
Confidence 998
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.29 E-value=3e-10 Score=104.73 Aligned_cols=200 Identities=10% Similarity=0.125 Sum_probs=127.7
Q ss_pred EEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-Eee-cCCCCCcEEEEEeCCCceEECcCCCCc
Q 017140 119 ATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWA-IPGRDPEYRIFELGTNSWRPLKGGPNY 196 (376)
Q Consensus 119 ~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~-~~~~~~~~~vyss~~~~W~~~~~~~~~ 196 (376)
++++||.|++|. .+ |+.+..+........ .+...|++ ... .......+++|+..+++|+.++..+..
T Consensus 80 ~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 148 (318)
T 2woz_A 80 FFQLDNVSSEWV------GL--PPLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK 148 (318)
T ss_dssp EEEEETTTTEEE------EC--SCBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC
T ss_pred EEEEeCCCCcEE------EC--CCCCccccccceEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc
Confidence 889999999999 66 544433222122222 23333333 221 112345799999999999999877655
Q ss_pred cCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCCeEEE
Q 017140 197 YPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDATMTI 275 (376)
Q Consensus 197 ~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~I 275 (376)
+....++.++|++|.+++..........+..||+.+.+|..++ +|.... ....+..+|+|+++.........-.+
T Consensus 149 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~ 224 (318)
T 2woz_A 149 VYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS----MFGVAIHKGKIVIAGGVTEDGLSASV 224 (318)
T ss_dssp EESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEEEEEETTEEEEEE
T ss_pred ccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc----cceEEEECCEEEEEcCcCCCCccceE
Confidence 5567778899999999875322111136999999999999984 443322 34567789999999874322223467
Q ss_pred EEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc-----------CCCcEEEEEeCCCCcEEE
Q 017140 276 WVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV-----------SDSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 276 W~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~-----------~~~~~l~~ydl~t~~~~~ 344 (376)
|+++ ...+.|+++. .+|.. ... ..++..+|.|+++.-.. .....++.||+++++|++
T Consensus 225 ~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 225 EAFD-LKTNKWEVMT-EFPQE----RSS------ISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EEEE-TTTCCEEECC-CCSSC----CBS------CEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred EEEE-CCCCeEEECC-CCCCc----ccc------eEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 7775 3456899874 45532 111 11222467777764211 113468999999999999
Q ss_pred E
Q 017140 345 A 345 (376)
Q Consensus 345 v 345 (376)
+
T Consensus 293 ~ 293 (318)
T 2woz_A 293 M 293 (318)
T ss_dssp E
T ss_pred h
Confidence 8
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.29 E-value=2.1e-10 Score=105.05 Aligned_cols=203 Identities=9% Similarity=0.020 Sum_probs=130.3
Q ss_pred eeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-EeecCCCCCcEEEEEeCCCceEECcCCCC
Q 017140 117 LYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWAIPGRDPEYRIFELGTNSWRPLKGGPN 195 (376)
Q Consensus 117 ~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~~~~~~~~~~vyss~~~~W~~~~~~~~ 195 (376)
..+.++||.|++|. .+ |+.+..+....+... .+...|++ ..........+++|+..+++|+.++.++.
T Consensus 70 ~~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 138 (306)
T 3ii7_A 70 KRMDCYNVVKDSWY------SK--LGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT 138 (306)
T ss_dssp CEEEEEETTTTEEE------EE--ECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS
T ss_pred ceEEEEeCCCCeEE------EC--CCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC
Confidence 37899999999999 66 544333222222222 22222332 22122346789999999999999987776
Q ss_pred ccCCCcceEECceEEEEEecCCCCCC---ccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCC
Q 017140 196 YYPQRESVCVDGFVYFRSWVSTHKNG---RTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDA 271 (376)
Q Consensus 196 ~~~~~~~v~~~G~lyw~~~~~~~~~~---~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~ 271 (376)
.+....++.++|++|.+++....... ...+..||+.+.+|+.++ +|.... ...++..+|+|+++........
T Consensus 139 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~i~v~GG~~~~~~ 214 (306)
T 3ii7_A 139 QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK----NHGLVFVKDKIFAVGGQNGLGG 214 (306)
T ss_dssp CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEECCEETTEE
T ss_pred CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh----cceEEEECCEEEEEeCCCCCCC
Confidence 55567778899999999975432110 147999999999999984 444332 4456778999999976432222
Q ss_pred eEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc--CCCcEEEEEeCCCCcEEEEE
Q 017140 272 TMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV--SDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 272 ~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~--~~~~~l~~ydl~t~~~~~v~ 346 (376)
.-++|+++ ...+.|+++. .+|.. ... ..++..++.|+++.-.. .....+..||+++++|+.+.
T Consensus 215 ~~~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 215 LDNVEYYD-IKLNEWKMVS-PMPWK----GVT------VKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp BCCEEEEE-TTTTEEEECC-CCSCC----BSC------CEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred CceEEEee-CCCCcEEECC-CCCCC----ccc------eeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 23577775 3356899874 45532 111 11222477777775211 12357999999999999985
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.26 E-value=8.4e-10 Score=100.70 Aligned_cols=199 Identities=10% Similarity=0.069 Sum_probs=128.4
Q ss_pred eEEEEcCCCCc---eeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEee--cCCCCCcEEEEEeCCCceEECcC
Q 017140 118 YATLCNPSTRQ---TFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWA--IPGRDPEYRIFELGTNSWRPLKG 192 (376)
Q Consensus 118 ~~~V~NP~T~~---~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~--~~~~~~~~~vyss~~~~W~~~~~ 192 (376)
.++++||.|++ |. .+ |+.+..+........+ + +++.+.. .......+++|+..+++|+.+..
T Consensus 79 ~~~~~d~~~~~~~~W~------~~--~~~p~~r~~~~~~~~~---~--~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 145 (301)
T 2vpj_A 79 SVECLDYTADEDGVWY------SV--APMNVRRGLAGATTLG---D--MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD 145 (301)
T ss_dssp CEEEEETTCCTTCCCE------EE--CCCSSCCBSCEEEEET---T--EEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCCCCeeE------EC--CCCCCCccceeEEEEC---C--EEEEEcccCCCcccceEEEEcCCCCeEEECCC
Confidence 68999999999 99 66 5554333222222222 2 2333222 11235689999999999999877
Q ss_pred CCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCC
Q 017140 193 GPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDA 271 (376)
Q Consensus 193 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~ 271 (376)
.+..+....++.++|++|.+++..... ....+.+||+.+.+|..+. +|.... ...++..+|+|+++........
T Consensus 146 ~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~i~v~GG~~~~~~ 220 (301)
T 2vpj_A 146 MQTAREGAGLVVASGVIYCLGGYDGLN-ILNSVEKYDPHTGHWTNVTPMATKRS----GAGVALLNDHIYVVGGFDGTAH 220 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEECCBCSSSB
T ss_pred CCCCcccceEEEECCEEEEECCCCCCc-ccceEEEEeCCCCcEEeCCCCCcccc----cceEEEECCEEEEEeCCCCCcc
Confidence 665555677788999999998754321 1147999999999999984 444332 4456778999999987432222
Q ss_pred eEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCC--CcEEEEEeCCCCcEEEEE
Q 017140 272 TMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSD--SVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 272 ~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~--~~~l~~ydl~t~~~~~v~ 346 (376)
.-++|+++ ...+.|+++. .+|.. ... ...+..+|.|+++.-.... ...+..||+++++|+.+.
T Consensus 221 ~~~v~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 221 LSSVEAYN-IRTDSWTTVT-SMTTP----RCY------VGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp CCCEEEEE-TTTTEEEEEC-CCSSC----CBS------CEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred cceEEEEe-CCCCcEEECC-CCCCc----ccc------eeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 34567664 3356899874 45532 111 1122247777777422111 257899999999999885
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.24 E-value=8.5e-10 Score=100.75 Aligned_cols=201 Identities=9% Similarity=0.030 Sum_probs=128.7
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-EeecCCCCCcEEEEEeCCCceEECcCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWAIPGRDPEYRIFELGTNSWRPLKGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~~~~~~~~~~vyss~~~~W~~~~~~~~~ 196 (376)
.+.++||.|++|. .+ |+.+..+....+..+ .+...|++ ... ......+++|+..+++|+.+..++..
T Consensus 78 ~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~---~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~ 145 (302)
T 2xn4_A 78 TVDSYDPVKDQWT------SV--ANMRDRRSTLGAAVL---NGLLYAVGGFDG-STGLSSVEAYNIKSNEWFHVAPMNTR 145 (302)
T ss_dssp CEEEEETTTTEEE------EE--CCCSSCCBSCEEEEE---TTEEEEEEEECS-SCEEEEEEEEETTTTEEEEECCCSSC
T ss_pred ceEEECCCCCcee------eC--CCCCccccceEEEEE---CCEEEEEcCCCC-CccCceEEEEeCCCCeEeecCCCCCc
Confidence 6899999999999 77 655443322222222 23333333 221 12245799999999999999877655
Q ss_pred cCCCcceEECceEEEEEecCCCCC-CccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCCeEE
Q 017140 197 YPQRESVCVDGFVYFRSWVSTHKN-GRTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDATMT 274 (376)
Q Consensus 197 ~~~~~~v~~~G~lyw~~~~~~~~~-~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~ 274 (376)
+....++.++|++|.+++...... ....+..||+.+.+|..+. +|.... ...++..+|+|+++.........-+
T Consensus 146 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~ 221 (302)
T 2xn4_A 146 RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS----GAGVGVLNNLLYAVGGHDGPLVRKS 221 (302)
T ss_dssp CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEECCBSSSSBCCC
T ss_pred ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc----cccEEEECCEEEEECCCCCCcccce
Confidence 556677889999999987543210 0136999999999999984 444332 4456788999999987432222335
Q ss_pred EEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEEeCCCCcEEEEE
Q 017140 275 IWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 275 IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~ydl~t~~~~~v~ 346 (376)
+|+++ ...+.|+++. .+|.. ... ..++..+|.|+++.-... ....+..||+++++|+.+.
T Consensus 222 ~~~yd-~~~~~W~~~~-~~~~~----r~~------~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 222 VEVYD-PTTNAWRQVA-DMNMC----RRN------AGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEEE-TTTTEEEEEC-CCSSC----CBS------CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EEEEe-CCCCCEeeCC-CCCCc----ccc------CeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 77775 3356899874 44432 111 112224777887742111 1346999999999999874
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.24 E-value=8.8e-10 Score=101.10 Aligned_cols=200 Identities=9% Similarity=0.004 Sum_probs=128.8
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-EeecCCCCCcEEEEEeCCCceEECcCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWAIPGRDPEYRIFELGTNSWRPLKGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~~~~~~~~~~vyss~~~~W~~~~~~~~~ 196 (376)
.+.++||.|++|. .+ |+++..+.......+ .+...|++ ... ......+++|+..+++|+.+...+..
T Consensus 91 ~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~---~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~ 158 (308)
T 1zgk_A 91 ALDCYNPMTNQWS------PC--APMSVPRNRIGVGVI---DGHIYAVGGSHG-CIHHNSVERYEPERDEWHLVAPMLTR 158 (308)
T ss_dssp CEEEEETTTTEEE------EC--CCCSSCCBTCEEEEE---TTEEEEECCEET-TEECCCEEEEETTTTEEEECCCCSSC
T ss_pred eEEEECCCCCeEe------EC--CCCCcCccccEEEEE---CCEEEEEcCCCC-CcccccEEEECCCCCeEeECCCCCcc
Confidence 6899999999999 66 544333222122222 22222332 221 12356799999999999999877665
Q ss_pred cCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCCeEEE
Q 017140 197 YPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDATMTI 275 (376)
Q Consensus 197 ~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~I 275 (376)
+....++.++|++|.+++...... ...+..||+.+.+|..++ +|.... ....+..+|+|+++.........-++
T Consensus 159 r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~v 233 (308)
T 1zgk_A 159 RIGVGVAVLNRLLYAVGGFDGTNR-LNSAECYYPERNEWRMITAMNTIRS----GAGVCVLHNCIYAAGGYDGQDQLNSV 233 (308)
T ss_dssp CBSCEEEEETTEEEEECCBCSSCB-CCCEEEEETTTTEEEECCCCSSCCB----SCEEEEETTEEEEECCBCSSSBCCCE
T ss_pred ccceEEEEECCEEEEEeCCCCCCc-CceEEEEeCCCCeEeeCCCCCCccc----cceEEEECCEEEEEeCCCCCCccceE
Confidence 556777888999999987653211 147999999999999884 443322 44567789999999864333334457
Q ss_pred EEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc--CCCcEEEEEeCCCCcEEEEE
Q 017140 276 WVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV--SDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 276 W~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~--~~~~~l~~ydl~t~~~~~v~ 346 (376)
|+++ ...+.|+++. .+|.. ... ..++..++.|+++.-.. .....+..||+++++|+++.
T Consensus 234 ~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 234 ERYD-VETETWTFVA-PMKHR----RSA------LGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp EEEE-TTTTEEEECC-CCSSC----CBS------CEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred EEEe-CCCCcEEECC-CCCCC----ccc------eEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 7775 3356899874 44432 111 11222467787774211 12357999999999999984
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.20 E-value=1.9e-09 Score=98.66 Aligned_cols=200 Identities=12% Similarity=0.090 Sum_probs=128.2
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-EeecCCCCCcEEEEEeCCCceEECcCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWAIPGRDPEYRIFELGTNSWRPLKGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~~~~~~~~~~vyss~~~~W~~~~~~~~~ 196 (376)
.+.++||.+++|. .+ ++.+..+........+ +...|++ .. ......+++|+..+++|+.+..++..
T Consensus 25 ~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~~---~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 25 SCRYFNPKDYSWT------DI--RCPFEKRRDAACVFWD---NVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp SEEEEETTTTEEE------EC--CCCSCCCBSCEEEEET---TEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred eEEEecCCCCCEe------cC--CCCCcccceeEEEEEC---CEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCcc
Confidence 7899999999999 66 5443332222222222 2222222 22 23467899999999999999877765
Q ss_pred cCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEE-ecChhhhccCCccceEEeCCeEEEEEccCCCCC----
Q 017140 197 YPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVI-EIPAKALARRSESELIVYSGRPAIADHLLLEDA---- 271 (376)
Q Consensus 197 ~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~---- 271 (376)
+....++.++|++|.+++..........+..||+.+.+|..+ ++|.... ....+..+|+|+++........
T Consensus 92 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 92 RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC----SHGMVEANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEECCEESCTTTCEE
T ss_pred ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc----eeEEEEECCEEEEECCCCCCCCcccc
Confidence 556777889999999987652211124799999999999998 4454332 4456778999999976432322
Q ss_pred eEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEEeCCCCcEEEEE
Q 017140 272 TMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 272 ~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~ydl~t~~~~~v~ 346 (376)
.-++|.++ ...+.|+++. .+|.. ... ..++..++.|+++.-... ....+..||+++++|+.+.
T Consensus 168 ~~~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 168 LNSCEVYD-PATETWTELC-PMIEA----RKN------HGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp CCCEEEEE-TTTTEEEEEC-CCSSC----CBS------CEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred cceEEEeC-CCCCeEEECC-Cccch----hhc------ceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 34577774 3356899874 45532 111 112223677777642111 1246899999999999874
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.19 E-value=5.2e-09 Score=95.39 Aligned_cols=201 Identities=12% Similarity=0.127 Sum_probs=128.1
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCc---eEECcCCC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNS---WRPLKGGP 194 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~---W~~~~~~~ 194 (376)
.++++||.|++|. .+ |+.+..+........+ +...|++-.........+++|+..+++ |+.+...+
T Consensus 32 ~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~~---~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p 100 (301)
T 2vpj_A 32 VVEKYDPKTQEWS------FL--PSITRKRRYVASVSLH---DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN 100 (301)
T ss_dssp CEEEEETTTTEEE------EC--CCCSSCCBSCEEEEET---TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS
T ss_pred EEEEEcCCCCeEE------eC--CCCChhhccccEEEEC---CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC
Confidence 6899999999999 66 5443322221222222 222222211112245689999999999 99997776
Q ss_pred CccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCCeE
Q 017140 195 NYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDATM 273 (376)
Q Consensus 195 ~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l 273 (376)
..+....++.++|++|.+++...... ...+..||+.+.+|..++ +|.... ....+..+|+|+++...+.....-
T Consensus 101 ~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~ 175 (301)
T 2vpj_A 101 VRRGLAGATTLGDMIYVSGGFDGSRR-HTSMERYDPNIDQWSMLGDMQTARE----GAGLVVASGVIYCLGGYDGLNILN 175 (301)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSCB-CCEEEEEETTTTEEEEEEECSSCCB----SCEEEEETTEEEEECCBCSSCBCC
T ss_pred CCccceeEEEECCEEEEEcccCCCcc-cceEEEEcCCCCeEEECCCCCCCcc----cceEEEECCEEEEECCCCCCcccc
Confidence 65556778889999999987653211 147999999999999884 454332 445667899999997743333334
Q ss_pred EEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEEeCCCCcEEEEE
Q 017140 274 TIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 274 ~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~ydl~t~~~~~v~ 346 (376)
++|+++ ...+.|+++. .+|.. ... ..++..++.|+++.-... ....+..||+++++|+.+.
T Consensus 176 ~~~~~d-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 176 SVEKYD-PHTGHWTNVT-PMATK----RSG------AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CEEEEE-TTTTEEEEEC-CCSSC----CBS------CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred eEEEEe-CCCCcEEeCC-CCCcc----ccc------ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 567774 3356899874 44532 111 112224677777742111 1357999999999999884
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.11 E-value=3.8e-09 Score=96.80 Aligned_cols=201 Identities=10% Similarity=0.044 Sum_probs=127.5
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-Ee---ecCCCCCcEEEEEeCCCceEECcCC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SW---AIPGRDPEYRIFELGTNSWRPLKGG 193 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~---~~~~~~~~~~vyss~~~~W~~~~~~ 193 (376)
.+.++||.|++|. .+ |+.+..+........ .+...|++ .. ........+++|+..+++|+.+..+
T Consensus 40 ~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 108 (308)
T 1zgk_A 40 YLEAYNPSNGTWL------RL--ADLQVPRSGLAGCVV---GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM 108 (308)
T ss_dssp CEEEEETTTTEEE------EC--CCCSSCCBSCEEEEE---TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCC
T ss_pred eEEEEcCCCCeEe------EC--CCCCcccccceEEEE---CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCC
Confidence 6899999999999 66 444333222111121 22333333 21 1112356799999999999999877
Q ss_pred CCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEE-ecChhhhccCCccceEEeCCeEEEEEccCCCCCe
Q 017140 194 PNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVI-EIPAKALARRSESELIVYSGRPAIADHLLLEDAT 272 (376)
Q Consensus 194 ~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~ 272 (376)
+..+.....+.++|++|.+++...... ...+..||+.+.+|..+ ++|.... ....+..+|+|+++.........
T Consensus 109 p~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~ 183 (308)
T 1zgk_A 109 SVPRNRIGVGVIDGHIYAVGGSHGCIH-HNSVERYEPERDEWHLVAPMLTRRI----GVGVAVLNRLLYAVGGFDGTNRL 183 (308)
T ss_dssp SSCCBTCEEEEETTEEEEECCEETTEE-CCCEEEEETTTTEEEECCCCSSCCB----SCEEEEETTEEEEECCBCSSCBC
T ss_pred CcCccccEEEEECCEEEEEcCCCCCcc-cccEEEECCCCCeEeECCCCCcccc----ceEEEEECCEEEEEeCCCCCCcC
Confidence 665556777889999999987543210 13699999999999988 4554332 44556779999999874333223
Q ss_pred EEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEEeCCCCcEEEEE
Q 017140 273 MTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 273 l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~ydl~t~~~~~v~ 346 (376)
-++|.++ ...+.|+++. .+|.. ... ..++..++.|+++.-... ....+..||+++++|+.+.
T Consensus 184 ~~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 184 NSAECYY-PERNEWRMIT-AMNTI----RSG------AGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp CCEEEEE-TTTTEEEECC-CCSSC----CBS------CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred ceEEEEe-CCCCeEeeCC-CCCCc----ccc------ceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 4567764 3356899874 44532 111 112224777777742111 1357999999999999875
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.10 E-value=1.3e-08 Score=92.71 Aligned_cols=199 Identities=11% Similarity=0.062 Sum_probs=127.1
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEee--cCCCCCcEEEEEeCCCceEECcCCCC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWA--IPGRDPEYRIFELGTNSWRPLKGGPN 195 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~--~~~~~~~~~vyss~~~~W~~~~~~~~ 195 (376)
.+.++||.+++|. .+ |+.+..+........ .+ +++.+.. .......+++|+..+++|+.+..++.
T Consensus 31 ~~~~~d~~~~~W~------~~--~~~p~~r~~~~~~~~---~~--~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 97 (302)
T 2xn4_A 31 SVECYDFKEERWH------QV--AELPSRRCRAGMVYM---AG--LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD 97 (302)
T ss_dssp CEEEEETTTTEEE------EE--CCCSSCCBSCEEEEE---TT--EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred cEEEEcCcCCcEe------Ec--ccCCcccccceEEEE---CC--EEEEEeCcCCCccccceEEECCCCCceeeCCCCCc
Confidence 6899999999999 66 544333222122222 12 2333222 11235679999999999999987776
Q ss_pred ccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEe-cChhhhccCCccceEEeCCeEEEEEccCCCCC--e
Q 017140 196 YYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE-IPAKALARRSESELIVYSGRPAIADHLLLEDA--T 272 (376)
Q Consensus 196 ~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~--~ 272 (376)
.+....++.++|.+|.+++..... ....+..||+.+.+|..++ +|.... ....+..+|+|+++........ .
T Consensus 98 ~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 98 RRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNTRRS----SVGVGVVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp CCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSSCCB----SCEEEEETTEEEEECCEETTTTEEC
T ss_pred cccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCCccc----CceEEEECCEEEEEeCCCCCCCccc
Confidence 555677888999999999765321 1137899999999999984 443322 4456778999999976432221 2
Q ss_pred EEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEEeCCCCcEEEEE
Q 017140 273 MTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 273 l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~ydl~t~~~~~v~ 346 (376)
-++|.++ ...+.|+++. .+|.. ... ..++..++.|+++.-... ....+..||+++++|+.+.
T Consensus 173 ~~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 173 STVECYN-ATTNEWTYIA-EMSTR----RSG------AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp CCEEEEE-TTTTEEEEEC-CCSSC----CBS------CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred cEEEEEe-CCCCcEEECC-CCccc----ccc------ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 3467774 3356899874 45532 111 112224777877742111 1346999999999999875
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.07 E-value=2.4e-08 Score=91.73 Aligned_cols=203 Identities=9% Similarity=0.022 Sum_probs=126.7
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-Eeec--C-C--CCCcEEEEEeCCCceEECc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWAI--P-G--RDPEYRIFELGTNSWRPLK 191 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~~--~-~--~~~~~~vyss~~~~W~~~~ 191 (376)
.+.++||.|++|.. | .+ |.+..+. . ++.. ...+...|++ .... . . ....+++|+..+++|+.+.
T Consensus 14 ~~~~yd~~~~~W~~-~---~~--~~p~~r~-~-~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 14 GAVAYDPAANECYC-A---SL--SSQVPKN-H-VSLV--TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEEETTTTEEEE-E---EC--CCCSCSS-E-EEEE--CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred ceEEECCCCCeEec-C---CC--CCCCCcc-c-eEEE--EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 78999999999982 1 33 4321111 1 2222 1234444554 3211 1 1 1234889999999999998
Q ss_pred CCCCccCCCcceEECceEEEEEecCC--CCCCccEEEEEEcCCcceEEE-ecChhhhccCCccceEEeCCeEEEEEccCC
Q 017140 192 GGPNYYPQRESVCVDGFVYFRSWVST--HKNGRTVLIAFDLHEESFRVI-EIPAKALARRSESELIVYSGRPAIADHLLL 268 (376)
Q Consensus 192 ~~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~ 268 (376)
.++..+.....+.++|.+|.+++... .......+..||+.+.+|+.+ ++|.... ....+..+|+|+++.....
T Consensus 84 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 84 PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY----GHTVLSHMDLVYVIGGKGS 159 (315)
T ss_dssp CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB----SCEEEEETTEEEEECCBCT
T ss_pred CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc----ceeEEEECCEEEEEeCCCC
Confidence 77755556778899999999998531 111114799999999999988 4554432 4456778999999987422
Q ss_pred C-CCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEEeCCCCcEEEE
Q 017140 269 E-DATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 269 ~-~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~ydl~t~~~~~v 345 (376)
. ...-++|+++ .....|+++. .+|.. ... ..++..++.|+++.-... ....+..||+++++|+.+
T Consensus 160 ~~~~~~~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 160 DRKCLNKMCVYD-PKKFEWKELA-PMQTA----RSL------FGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp TSCBCCCEEEEE-TTTTEEEECC-CCSSC----CBS------CEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred CCcccceEEEEe-CCCCeEEECC-CCCCc----hhc------eEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 2 2234577775 3356899874 45532 111 112224777777742111 134799999999999998
Q ss_pred E
Q 017140 346 E 346 (376)
Q Consensus 346 ~ 346 (376)
.
T Consensus 228 ~ 228 (315)
T 4asc_A 228 E 228 (315)
T ss_dssp C
T ss_pred C
Confidence 4
No 12
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.06 E-value=3.8e-11 Score=79.84 Aligned_cols=46 Identities=20% Similarity=0.309 Sum_probs=39.4
Q ss_pred CCCCCCCCCHHHHHHHhcCCCccccceeeeccccchhhccChhhHh
Q 017140 7 PPSSSKPIPSEIIYDILTKLPIKSLMRFRCLSKLCSSYITAPSFAE 52 (376)
Q Consensus 7 ~~~~~~~LP~Dll~~IL~rLP~~~l~r~r~VCK~W~~li~s~~F~~ 52 (376)
+...+..||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3456889999999999999999999999999999999999988754
No 13
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.00 E-value=9e-11 Score=105.68 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=46.2
Q ss_pred CCCCCCCHHHHHHHhcCCCccccc-eeeeccccchhhccChhhHhhhhhcc
Q 017140 9 SSSKPIPSEIIYDILTKLPIKSLM-RFRCLSKLCSSYITAPSFAELHALNF 58 (376)
Q Consensus 9 ~~~~~LP~Dll~~IL~rLP~~~l~-r~r~VCK~W~~li~s~~F~~~h~~~~ 58 (376)
..+..||+||+.+||++||+++|+ ||++|||+|+.+++++.|.+.|+++.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 467789999999999999999999 99999999999999999999987643
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.96 E-value=1.5e-07 Score=86.43 Aligned_cols=212 Identities=11% Similarity=0.103 Sum_probs=127.5
Q ss_pred eeEE-EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEE-Eeec--C---CCCCcEEEE
Q 017140 108 NGII-LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLN-SWAI--P---GRDPEYRIF 180 (376)
Q Consensus 108 ~Gll-~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~-~~~~--~---~~~~~~~vy 180 (376)
++.| +-... ...++||.|++|... .+ |... .+.. .+.. ...+...|++ .... . .....+++|
T Consensus 15 ~~~i~~~GG~-~~~~yd~~~~~W~~~----~~--~~~~-~r~~-~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 15 KDLILLVNDT-AAVAYDPMENECYLT----AL--AEQI-PRNH-SSIV--TQQNQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEECSS-EEEEEETTTTEEEEE----EE--CTTS-CSSE-EEEE--CSSSCEEEEESSCC-------CCCBEEEEE
T ss_pred cchhhhcccc-ceEEECCCCCceecc----cC--CccC-Cccc-eEEE--EECCEEEEECCcccCccccCCCccccEEEE
Confidence 4455 33333 689999999999931 12 2111 1111 1221 1233333443 2111 1 012238999
Q ss_pred EeCCCceEECcCCCCccCCCcceEECceEEEEEecCC-CCCCccEEEEEEcCCcceEEE-ecChhhhccCCccceEEeCC
Q 017140 181 ELGTNSWRPLKGGPNYYPQRESVCVDGFVYFRSWVST-HKNGRTVLIAFDLHEESFRVI-EIPAKALARRSESELIVYSG 258 (376)
Q Consensus 181 ss~~~~W~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~-~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~G 258 (376)
+..+++|+.++.++..+.....+.++|++|.+++... .......+..||+.+.+|+.+ ++|.... ....+..+|
T Consensus 84 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~ 159 (318)
T 2woz_A 84 DNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY----GHNVISHNG 159 (318)
T ss_dssp ETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE----SCEEEEETT
T ss_pred eCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc----ccEEEEECC
Confidence 9999999999877665556777889999999998652 111114799999999999998 4554433 344566899
Q ss_pred eEEEEEccCCC-CCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEE
Q 017140 259 RPAIADHLLLE-DATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHY 335 (376)
Q Consensus 259 ~L~l~~~~~~~-~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~y 335 (376)
+|+++...... ...-++|+++ ...+.|+++. .+|.. ... ..++..+|.|+++.-... ....+..|
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~~~~~~~iyv~GG~~~~~~~~~~~~y 227 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYN-PKKGDWKDLA-PMKTP----RSM------FGVAIHKGKIVIAGGVTEDGLSASVEAF 227 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEE-TTTTEEEEEC-CCSSC----CBS------CEEEEETTEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEcCCCCCCCccceEEEEc-CCCCEEEECC-CCCCC----ccc------ceEEEECCEEEEEcCcCCCCccceEEEE
Confidence 99999764222 2223577775 3356899874 44532 111 112224677777742111 12468899
Q ss_pred eCCCCcEEEEE
Q 017140 336 DVVNRSMRRAE 346 (376)
Q Consensus 336 dl~t~~~~~v~ 346 (376)
|+++++|+.+.
T Consensus 228 d~~~~~W~~~~ 238 (318)
T 2woz_A 228 DLKTNKWEVMT 238 (318)
T ss_dssp ETTTCCEEECC
T ss_pred ECCCCeEEECC
Confidence 99999999874
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.94 E-value=7.2e-08 Score=90.03 Aligned_cols=218 Identities=13% Similarity=0.037 Sum_probs=125.4
Q ss_pred ceeeEE--Ee-cCCeeEEEEcCC--CCceeeCCCceeecCCCCC-CccceeEEEeEeCCCCcEEEEE-Eee--c--CCCC
Q 017140 106 SVNGII--LM-DFGLYATLCNPS--TRQTFNTPFVCSLTSPSVN-STYFCVNSFGFDPVSKKYKVLN-SWA--I--PGRD 174 (376)
Q Consensus 106 s~~Gll--~~-~~~~~~~V~NP~--T~~~~~~p~~~~L~~P~~~-~~~~~~~~l~~d~~~~~ykvv~-~~~--~--~~~~ 174 (376)
..+|.| +. .....++++||. +++|. .+ |+.+ ..+....+..++ +...|++ ... . ....
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~------~~--~~~p~~~R~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~ 85 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWT------AL--AAFPGGPRDQATSAFID---GNLYVFGGIGKNSEGLTQVF 85 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEE------EC--CCCTTCCCBSCEEEEET---TEEEEECCEEECTTSCEEEC
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCee------EC--CCCCCCcCccceEEEEC---CEEEEEcCCCCCCCccceee
Confidence 336666 32 122379999998 59999 66 5443 222221222222 3333333 311 1 1135
Q ss_pred CcEEEEEeCCCceEECcCCC-CccCCCcceEECceEEEEEecCCCC---------------------------------C
Q 017140 175 PEYRIFELGTNSWRPLKGGP-NYYPQRESVCVDGFVYFRSWVSTHK---------------------------------N 220 (376)
Q Consensus 175 ~~~~vyss~~~~W~~~~~~~-~~~~~~~~v~~~G~lyw~~~~~~~~---------------------------------~ 220 (376)
..+++|+..+++|+.+..++ ..+....++.++|++|.+++..... .
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYF 165 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGC
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccC
Confidence 68999999999999998776 3333555677999999999753210 0
Q ss_pred CccEEEEEEcCCcceEEE-ecChhhhccCCccceEEeCCeEEEEEccCCC-CCeEEEEEec-cCCCCCeEEEEEEcCCCc
Q 017140 221 GRTVLIAFDLHEESFRVI-EIPAKALARRSESELIVYSGRPAIADHLLLE-DATMTIWVLD-ENDGDYWVQIKVFLPEDY 297 (376)
Q Consensus 221 ~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~-~~~l~IW~l~-~~~~~~W~~~~~~lp~~~ 297 (376)
....+..||+.+.+|+.+ ++|.... ....++..+|+|+++...... ...-++|.++ +.....|+++. .+|...
T Consensus 166 ~~~~v~~yd~~~~~W~~~~~~p~~~~---~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~-~~~~~~ 241 (357)
T 2uvk_A 166 FNKFLLSFDPSTQQWSYAGESPWYGT---AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA-PVSSPD 241 (357)
T ss_dssp CCCEEEEEETTTTEEEEEEECSSCCC---BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECC-CSSTTT
T ss_pred CcccEEEEeCCCCcEEECCCCCCCCc---ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC-CCCCCc
Confidence 013899999999999998 4554322 125567789999999763211 1233577765 23456899874 344221
Q ss_pred ccccccccccceeEEeecCCeEEEeecccCC-------------------CcEEEEEeCCCCcEEEEE
Q 017140 298 GEEILEEDIDYFVDCIGRNNELLLVPQTVSD-------------------SVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~-------------------~~~l~~ydl~t~~~~~v~ 346 (376)
. ..+ ..++..++.|+++.-.... ...+..||+++++|+++.
T Consensus 242 ~--~~~------~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 242 G--VAG------GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp C--CBS------CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred c--ccc------ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 1 111 1122247777777421000 135789999999999985
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.79 E-value=2.5e-07 Score=86.32 Aligned_cols=159 Identities=9% Similarity=0.046 Sum_probs=95.8
Q ss_pred CCcEEEEEeCCCceEECcCCCCccC-CCcceEECceEEEEEecCCCCCCccEEEEEEc--CCcceEEEe-cChhhhccCC
Q 017140 174 DPEYRIFELGTNSWRPLKGGPNYYP-QRESVCVDGFVYFRSWVSTHKNGRTVLIAFDL--HEESFRVIE-IPAKALARRS 249 (376)
Q Consensus 174 ~~~~~vyss~~~~W~~~~~~~~~~~-~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~--~~~~~~~i~-lP~~~~~~~~ 249 (376)
...+++|+..+++|+.+..++.... ....+.++|++|.+++..........+..||+ ++.+|+.+. +|.... ..
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~--~~ 244 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG--VA 244 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC--CB
T ss_pred cccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc--cc
Confidence 4689999999999999877664333 36778899999999865321100135777876 889999873 433221 11
Q ss_pred ccceEEeCCeEEEEEccCCC-----------------CCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEE
Q 017140 250 ESELIVYSGRPAIADHLLLE-----------------DATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDC 312 (376)
Q Consensus 250 ~~~l~~~~G~L~l~~~~~~~-----------------~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~ 312 (376)
...++..+|+|+++...... .....+|+++ .+...|+++. .+|.. ... ..+
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd-~~~~~W~~~~-~~p~~----r~~------~~~ 312 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL-WHNGKWDKSG-ELSQG----RAY------GVS 312 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEE-CC---CEEEE-ECSSC----CBS------SEE
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEe-cCCCceeeCC-CCCCC----ccc------cee
Confidence 33467889999999763211 1123566664 3356899974 56643 111 112
Q ss_pred eecCCeEEEeecccCC---CcEEEEEeCCCCcEEEEE
Q 017140 313 IGRNNELLLVPQTVSD---SVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 313 ~~~~g~ill~~~~~~~---~~~l~~ydl~t~~~~~v~ 346 (376)
+..+|.|+++.-.... ...++.+++++++|.+..
T Consensus 313 ~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 313 LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 2247778777521111 246888999999987663
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.69 E-value=7.3e-07 Score=90.94 Aligned_cols=204 Identities=13% Similarity=0.155 Sum_probs=121.4
Q ss_pred eEEEEcCCCCceeeCCCceeecCC-C-----CCCccceeEEEeEeCCCCcEEEEE-EeecCCCCCcEEEEEeCCCceEEC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSP-S-----VNSTYFCVNSFGFDPVSKKYKVLN-SWAIPGRDPEYRIFELGTNSWRPL 190 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P-~-----~~~~~~~~~~l~~d~~~~~ykvv~-~~~~~~~~~~~~vyss~~~~W~~~ 190 (376)
.++++||.|++|. .+ + + .+..+.. ++.......+...|++ ..........+++|+..+++|+.+
T Consensus 413 ~v~~yd~~~~~W~------~~--~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~ 483 (695)
T 2zwa_A 413 EILQLSIHYDKID------MK--NIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMI 483 (695)
T ss_dssp CEEEEEECSSCEE------EE--ECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEEC
T ss_pred cEEEEECCCCeEE------Ee--ccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEEC
Confidence 6899999999999 55 4 2 1111111 2222221022222332 221111356799999999999999
Q ss_pred cCCCCccCCCcceEE-CceEEEEEecCCCCCCccEEEEEEcCCcceEEEe----cChhhhccCCccceEEeC---CeEEE
Q 017140 191 KGGPNYYPQRESVCV-DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE----IPAKALARRSESELIVYS---GRPAI 262 (376)
Q Consensus 191 ~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~----lP~~~~~~~~~~~l~~~~---G~L~l 262 (376)
+.++..+..+.++.+ +|++|.+++..... .+..||+.+.+|..+. +|.... ....+.++ |+|++
T Consensus 484 ~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~----~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 484 KSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSL----VSAGLEFDPVSKQGII 555 (695)
T ss_dssp CCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCC----BSCEEEEETTTTEEEE
T ss_pred CCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCccc----ceeEEEEeCCCCEEEE
Confidence 877655556666775 99999998765422 6999999999999986 343332 22334444 89999
Q ss_pred EEccCCC--CCeEEEEEeccCCCCC------eEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc-----CCC
Q 017140 263 ADHLLLE--DATMTIWVLDENDGDY------WVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV-----SDS 329 (376)
Q Consensus 263 ~~~~~~~--~~~l~IW~l~~~~~~~------W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~-----~~~ 329 (376)
+...... ...-++|.++-. .+. |+++. .+|. ..+ .+ +. . ++..+|.|+++.-.. ...
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~-~~~w~~~~~W~~~~-~~p~-~~R--~~---~~-~-~~~~~~~iyv~GG~~~~~~~~~~ 625 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYD-AENATEPITVIKKL-QHPL-FQR--YG---SQ-I-KYITPRKLLIVGGTSPSGLFDRT 625 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEEC-TTCSSCCEEEEEEE-ECGG-GCC--BS---CE-E-EEEETTEEEEECCBCSSCCCCTT
T ss_pred ECCcCCCCCeeeCcEEEEEcc-CCccccceEEEEcC-CCCC-CCc--cc---ce-E-EEeCCCEEEEECCccCCCCCCCC
Confidence 9874222 122356666432 344 88764 3331 111 11 11 1 121348888875211 124
Q ss_pred cEEEEEeCCCCcEEEEEEe
Q 017140 330 VYVIHYDVVNRSMRRAEIF 348 (376)
Q Consensus 330 ~~l~~ydl~t~~~~~v~~~ 348 (376)
..+..||+++++|+.+.+.
T Consensus 626 ~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 626 NSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp TSEEEEETTTTEEEECCCC
T ss_pred CeEEEEECCCCeEEEeecc
Confidence 5699999999999966543
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.52 E-value=2.6e-05 Score=74.46 Aligned_cols=236 Identities=12% Similarity=0.068 Sum_probs=120.3
Q ss_pred CCCCCCCCHHHHHHHhcCCCccccceeeeccccchhhccChhhHhhhhhccCccCceEEEEeccCC----CCceE-EEe-
Q 017140 8 PSSSKPIPSEIIYDILTKLPIKSLMRFRCLSKLCSSYITAPSFAELHALNFPIKTVGLLVTCPARL----QTAQH-FFS- 81 (376)
Q Consensus 8 ~~~~~~LP~Dll~~IL~rLP~~~l~r~r~VCK~W~~li~s~~F~~~h~~~~~~~~p~ll~~~~~~~----~~~~~-~~~- 81 (376)
...+..||+|++.+||+.|++++|.|+++|||+|+.++.++.+-+..+.......|...-...... ...+. .|.
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~ 95 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 95 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhh
Confidence 345788999999999999999999999999999999999988777654322111111000000000 00000 000
Q ss_pred ---cCC---CCCC-CcccccCCCCCccccccceeeEE-E-ecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEE
Q 017140 82 ---VDF---DGGL-AVPLLTIPPRFSRYTTRSVNGII-L-MDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNS 152 (376)
Q Consensus 82 ---~~~---~~~~-~~~~l~~p~~~~~~~~~s~~Gll-~-~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~ 152 (376)
... .... ....+.-....-...+...+.++ . ..++ .+.|+|..+++... .+ +... ..+..
T Consensus 96 ~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg-~i~vwd~~~~~~~~-----~~--~~h~---~~v~~ 164 (445)
T 2ovr_B 96 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDN-TLKVWSAVTGKCLR-----TL--VGHT---GGVWS 164 (445)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTS-CEEEEETTTCCEEE-----EC--CCCS---SCEEE
T ss_pred hhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCC-cEEEEECCCCcEEE-----EE--cCCC---CCEEE
Confidence 000 0000 00111111111112233344555 3 3455 89999999988661 33 3211 22344
Q ss_pred EeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEE-CcCCCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcC
Q 017140 153 FGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRP-LKGGPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLH 231 (376)
Q Consensus 153 l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~-~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~ 231 (376)
+.+++ .+-+ .... ...+.+++..++.-.. ... +...-.++.++|.....+..+ ..|..+|+.
T Consensus 165 ~~~~~---~~l~-s~~~----dg~i~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~~ 227 (445)
T 2ovr_B 165 SQMRD---NIII-SGST----DRTLKVWNAETGECIHTLYG---HTSTVRCMHLHEKRVVSGSRD------ATLRVWDIE 227 (445)
T ss_dssp EEEET---TEEE-EEET----TSCEEEEETTTTEEEEEECC---CSSCEEEEEEETTEEEEEETT------SEEEEEESS
T ss_pred EEecC---CEEE-EEeC----CCeEEEEECCcCcEEEEECC---CCCcEEEEEecCCEEEEEeCC------CEEEEEECC
Confidence 55542 3322 2222 4578899888774221 111 111122344556554444443 289999998
Q ss_pred CcceE-EEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEecc
Q 017140 232 EESFR-VIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDE 280 (376)
Q Consensus 232 ~~~~~-~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~ 280 (376)
+.+.. .+..... ...-+..+|...++.. .+..+.+|.++.
T Consensus 228 ~~~~~~~~~~~~~------~v~~~~~~~~~l~~~~---~dg~i~iwd~~~ 268 (445)
T 2ovr_B 228 TGQCLHVLMGHVA------AVRCVQYDGRRVVSGA---YDFMVKVWDPET 268 (445)
T ss_dssp SCCEEEEEECCSS------CEEEEEECSSCEEEEE---TTSCEEEEEGGG
T ss_pred CCcEEEEEcCCcc------cEEEEEECCCEEEEEc---CCCEEEEEECCC
Confidence 76543 3332211 2222333666655555 567788887653
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.43 E-value=6.6e-05 Score=71.90 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHhcCCCccccceeeeccccchhhccC-hhhHh
Q 017140 11 SKPIPSEIIYDILTKLPIKSLMRFRCLSKLCSSYITA-PSFAE 52 (376)
Q Consensus 11 ~~~LP~Dll~~IL~rLP~~~l~r~r~VCK~W~~li~s-~~F~~ 52 (376)
+..||+|++.+||+.||+++|.|++.|||+|+.++.+ +..-+
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~ 57 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWK 57 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 4569999999999999999999999999999999998 55433
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.30 E-value=3.2e-05 Score=78.82 Aligned_cols=159 Identities=8% Similarity=0.014 Sum_probs=103.9
Q ss_pred CCCcEEEEEeCCCceEECc-C-----CCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEE-ecChh
Q 017140 173 RDPEYRIFELGTNSWRPLK-G-----GPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVI-EIPAK 243 (376)
Q Consensus 173 ~~~~~~vyss~~~~W~~~~-~-----~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~ 243 (376)
....+++|+..+++|+.+. . ++..+..+.++.+ +|.+|.+++..........+..||+.+.+|..+ ++|..
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~ 489 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT 489 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC
Confidence 4567999999999999987 4 2333446778888 999999998654321113699999999999998 45543
Q ss_pred hhccCCccceEE-eCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEE--cCCCcccccccccccceeEEee-cCCeE
Q 017140 244 ALARRSESELIV-YSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVF--LPEDYGEEILEEDIDYFVDCIG-RNNEL 319 (376)
Q Consensus 244 ~~~~~~~~~l~~-~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~--lp~~~~~~~~~~~~~~~~~~~~-~~g~i 319 (376)
.. ....+. .+|+|+++....... ++|+++ ...+.|+.+... +|.. ..+ +. ..+++ ..|.|
T Consensus 490 R~----~h~~~~~~~~~iyv~GG~~~~~---~v~~yd-~~t~~W~~~~~~g~~p~~----r~~---~~-a~v~~~~~~~i 553 (695)
T 2zwa_A 490 RF----RHSACSLPDGNVLILGGVTEGP---AMLLYN-VTEEIFKDVTPKDEFFQN----SLV---SA-GLEFDPVSKQG 553 (695)
T ss_dssp CB----SCEEEECTTSCEEEECCBCSSC---SEEEEE-TTTTEEEECCCSSGGGGS----CCB---SC-EEEEETTTTEE
T ss_pred cc----cceEEEEcCCEEEEECCCCCCC---CEEEEE-CCCCceEEccCCCCCCCc----ccc---ee-EEEEeCCCCEE
Confidence 32 334455 499999998743223 777775 335689987421 4422 111 11 22333 33778
Q ss_pred EEeeccc----CCCcEEEEEeCCCCc------EEEEEE
Q 017140 320 LLVPQTV----SDSVYVIHYDVVNRS------MRRAEI 347 (376)
Q Consensus 320 ll~~~~~----~~~~~l~~ydl~t~~------~~~v~~ 347 (376)
+++.-.. .....+..||+++++ |+.+.-
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 8875221 113579999999999 777753
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.24 E-value=2.8e-05 Score=78.69 Aligned_cols=203 Identities=8% Similarity=-0.000 Sum_probs=113.2
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCcccee-EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCV-NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~-~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~ 196 (376)
.+.++||.|++|. .+ +.+....... .+..+.. .+ +++.+.... ...+++|+..+++|..+..++..
T Consensus 220 ~~~~yd~~t~~w~------~~--~~~~~~~~~~~~~~~~~~-~g--~lyv~GG~~--~~~v~~yd~~t~~W~~~~~~~~~ 286 (656)
T 1k3i_A 220 LTSSWDPSTGIVS------DR--TVTVTKHDMFCPGISMDG-NG--QIVVTGGND--AKKTSLYDSSSDSWIPGPDMQVA 286 (656)
T ss_dssp EEEEECTTTCCBC------CC--EEEECSCCCSSCEEEECT-TS--CEEEECSSS--TTCEEEEEGGGTEEEECCCCSSC
T ss_pred EEEEEeCCCCcEE------eC--cccCCCCCCccccccCCC-CC--CEEEeCCCC--CCceEEecCcCCceeECCCCCcc
Confidence 5899999999999 44 3332211111 2222211 22 233333222 23799999999999999876655
Q ss_pred cCCCcceEE-CceEEEEEecCCCCCCccEEEEEEcCCcceEEEe----cChhhhccCCccceEEeCCeEEEEEccCC---
Q 017140 197 YPQRESVCV-DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE----IPAKALARRSESELIVYSGRPAIADHLLL--- 268 (376)
Q Consensus 197 ~~~~~~v~~-~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~----lP~~~~~~~~~~~l~~~~G~L~l~~~~~~--- 268 (376)
+....++.+ +|++|.+++..+.......+..||+.+.+|..++ .|.... ....+...+++++++...+.
T Consensus 287 R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~---~~~~~~~~~~~iyv~Gg~~g~~~ 363 (656)
T 1k3i_A 287 RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA---DKQGLYRSDNHAWLFGWKKGSVF 363 (656)
T ss_dssp CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC---CTTGGGTTTCSCCEEECGGGCEE
T ss_pred ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc---cccceeecCCceEEEECCCCcEE
Confidence 445566777 9999999984322111137899999999999984 121111 11233446777877765321
Q ss_pred ---CCCeEEEEEeccCCCCCeEEEEEEcCC----CcccccccccccceeEEe-e-cCCeEEEeeccc--------CCCcE
Q 017140 269 ---EDATMTIWVLDENDGDYWVQIKVFLPE----DYGEEILEEDIDYFVDCI-G-RNNELLLVPQTV--------SDSVY 331 (376)
Q Consensus 269 ---~~~~l~IW~l~~~~~~~W~~~~~~lp~----~~~~~~~~~~~~~~~~~~-~-~~g~ill~~~~~--------~~~~~ 331 (376)
....+..|-.+ .+.|....-..+. ...+ ..+ ..++ . .+|+|+++.-.. .....
T Consensus 364 ~~~~~~~v~~yd~~---~~~w~~~~~~~~~~~~~~~~~-~~~------~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 433 (656)
T 1k3i_A 364 QAGPSTAMNWYYTS---GSGDVKSAGKRQSNRGVAPDA-MCG------NAVMYDAVKGKILTFGGSPDYQDSDATTNAHI 433 (656)
T ss_dssp ECCSSSEEEEEECS---TTCEEEEEEECEETTEECCCC-BTC------EEEEEETTTTEEEEECCBSSSSSSBCCCCEEE
T ss_pred EecCccceeeeecC---CcceeecCCccccccccCCCC-CCC------ceEeccCCCCeEEEEeCCCCCCCCCcCCcceE
Confidence 12334444333 4567653212111 0000 111 1122 1 478888874210 00116
Q ss_pred EEEEeCCCCcEEEEE
Q 017140 332 VIHYDVVNRSMRRAE 346 (376)
Q Consensus 332 l~~ydl~t~~~~~v~ 346 (376)
+..||+++++|.++.
T Consensus 434 v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 434 ITLGEPGTSPNTVFA 448 (656)
T ss_dssp EECCSTTSCCEEEEC
T ss_pred EEcCCCCCCCeeEEc
Confidence 889999999998874
No 22
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.19 E-value=4.9e-05 Score=72.49 Aligned_cols=46 Identities=20% Similarity=0.113 Sum_probs=40.4
Q ss_pred CCCCCCHH----HHHHHhcCCCccccceeeeccccchhhccChhhHhhhh
Q 017140 10 SSKPIPSE----IIYDILTKLPIKSLMRFRCLSKLCSSYITAPSFAELHA 55 (376)
Q Consensus 10 ~~~~LP~D----ll~~IL~rLP~~~l~r~r~VCK~W~~li~s~~F~~~h~ 55 (376)
.+..||+| |+..||+.|++++|.|+++|||+|+.++.++.+-+..+
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~ 59 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLI 59 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHH
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 34569999 99999999999999999999999999999877666544
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.79 E-value=0.00015 Score=73.34 Aligned_cols=149 Identities=7% Similarity=-0.002 Sum_probs=90.7
Q ss_pred cEEEEEeCCCceEECcCCCCccC-CCc--ceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEe-cChhhhccCCcc
Q 017140 176 EYRIFELGTNSWRPLKGGPNYYP-QRE--SVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIE-IPAKALARRSES 251 (376)
Q Consensus 176 ~~~vyss~~~~W~~~~~~~~~~~-~~~--~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~~~ 251 (376)
.+++|+..+++|+.+..++.... ... ++..+|++|.+++... ..+..||+.+.+|..+. +|... ...
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~~~~R----~~~ 290 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVAR----GYQ 290 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCCSSCC----SSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCCCccc----ccc
Confidence 68999999999998866543322 222 2346899999998654 26999999999999873 44332 234
Q ss_pred ceEEe-CCeEEEEEccCCC---CCeEEEEEeccCCCCCeEEEE-E---EcCCCccccc--ccccccceeEEee-cCCeEE
Q 017140 252 ELIVY-SGRPAIADHLLLE---DATMTIWVLDENDGDYWVQIK-V---FLPEDYGEEI--LEEDIDYFVDCIG-RNNELL 320 (376)
Q Consensus 252 ~l~~~-~G~L~l~~~~~~~---~~~l~IW~l~~~~~~~W~~~~-~---~lp~~~~~~~--~~~~~~~~~~~~~-~~g~il 320 (376)
..+.+ +|+|+++...... ...+++|-. ..+.|+.+. . .++....... .+ .. +.+++ .+|.++
T Consensus 291 s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~---~t~~W~~~~~~~~~p~~~~~~~~~~~~~---~~-iyv~Gg~~g~~~ 363 (656)
T 1k3i_A 291 SSATMSDGRVFTIGGSWSGGVFEKNGEVYSP---SSKTWTSLPNAKVNPMLTADKQGLYRSD---NH-AWLFGWKKGSVF 363 (656)
T ss_dssp EEEECTTSCEEEECCCCCSSSCCCCEEEEET---TTTEEEEETTSCSGGGCCCCTTGGGTTT---CS-CCEEECGGGCEE
T ss_pred ceEEecCCeEEEEeCcccCCcccccceEeCC---CCCcceeCCCccccccccccccceeecC---Cc-eEEEECCCCcEE
Confidence 55677 9999999873211 233444433 256799862 1 1221100000 11 11 33444 566655
Q ss_pred EeecccCCCcEEEEEeCCCCcEEE
Q 017140 321 LVPQTVSDSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 321 l~~~~~~~~~~l~~ydl~t~~~~~ 344 (376)
.. .....+..||+++++|..
T Consensus 364 ~~----~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 364 QA----GPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp EC----CSSSEEEEEECSTTCEEE
T ss_pred Ee----cCccceeeeecCCcceee
Confidence 42 245689999999999754
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.78 E-value=2.5e-06 Score=75.99 Aligned_cols=49 Identities=16% Similarity=0.232 Sum_probs=44.2
Q ss_pred CCCCCCCHHHHHHHhcCCCccccceeeeccccchhhccChhhHhhhhhc
Q 017140 9 SSSKPIPSEIIYDILTKLPIKSLMRFRCLSKLCSSYITAPSFAELHALN 57 (376)
Q Consensus 9 ~~~~~LP~Dll~~IL~rLP~~~l~r~r~VCK~W~~li~s~~F~~~h~~~ 57 (376)
+.+..||+|++..||+.|++++|+|+.+|||.|+.+++++..-+.++.+
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~r 51 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLR 51 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHS
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhc
Confidence 4567899999999999999999999999999999999999888776543
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.52 E-value=2e-05 Score=72.55 Aligned_cols=45 Identities=20% Similarity=0.303 Sum_probs=39.4
Q ss_pred CCCCCCCCCHHHHHHHhcCCCccccceeeeccccchhhccChhhH
Q 017140 7 PPSSSKPIPSEIIYDILTKLPIKSLMRFRCLSKLCSSYITAPSFA 51 (376)
Q Consensus 7 ~~~~~~~LP~Dll~~IL~rLP~~~l~r~r~VCK~W~~li~s~~F~ 51 (376)
+...+..||+|++.+||.+|+.+++.+++.|||+|+.++.++...
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 346689999999999999999999999999999999999876643
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.51 E-value=0.00044 Score=68.61 Aligned_cols=35 Identities=11% Similarity=0.124 Sum_probs=29.5
Q ss_pred CCCCCCHHHHHHHhcCCC-ccccceeeeccccchhh
Q 017140 10 SSKPIPSEIIYDILTKLP-IKSLMRFRCLSKLCSSY 44 (376)
Q Consensus 10 ~~~~LP~Dll~~IL~rLP-~~~l~r~r~VCK~W~~l 44 (376)
.++.||+|++.+||.+|| .+++.|++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 477899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.29 E-value=0.00064 Score=67.45 Aligned_cols=34 Identities=9% Similarity=0.031 Sum_probs=31.9
Q ss_pred CCCCCHHHHHHHhcCC-Cccccceeeeccccchhh
Q 017140 11 SKPIPSEIIYDILTKL-PIKSLMRFRCLSKLCSSY 44 (376)
Q Consensus 11 ~~~LP~Dll~~IL~rL-P~~~l~r~r~VCK~W~~l 44 (376)
...||+|++.+||.+| |.+++.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 4579999999999999 899999999999999987
No 28
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.53 E-value=4.6 Score=37.31 Aligned_cols=147 Identities=11% Similarity=0.134 Sum_probs=78.9
Q ss_pred ceeeEE-EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCC
Q 017140 106 SVNGII-LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGT 184 (376)
Q Consensus 106 s~~Gll-~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~ 184 (376)
|.+++| ...+. .++|||..|++.. .+ -........+..+.+.+ ++.+-+++. ....+.+++..+
T Consensus 114 S~~n~lAvgld~-tV~lWd~~tg~~~------~~--~~~~~~~~~V~sv~fsp-dg~~lasgs-----~Dg~v~iWd~~~ 178 (420)
T 4gga_A 114 SSGNVLAVALDN-SVYLWSASSGDIL------QL--LQMEQPGEYISSVAWIK-EGNYLAVGT-----SSAEVQLWDVQQ 178 (420)
T ss_dssp CTTSEEEEEETT-EEEEEETTTCCEE------EE--EECCSTTCCEEEEEECT-TSSEEEEEE-----TTSCEEEEETTT
T ss_pred CCCCEEEEEeCC-EEEEEECCCCCEE------EE--EEecCCCCcEEEEEECC-CCCEEEEEE-----CCCeEEEEEcCC
Confidence 456788 66677 8999999999887 54 22222223346666766 455545442 145789999887
Q ss_pred CceEECcCCCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccce-EEeCCeEEEE
Q 017140 185 NSWRPLKGGPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESEL-IVYSGRPAIA 263 (376)
Q Consensus 185 ~~W~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l-~~~~G~L~l~ 263 (376)
+.-... ...+.....++..+|.+...+..+ ..+..+|..........+..... ....+ ..-+|...+.
T Consensus 179 ~~~~~~--~~~h~~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h~~---~~~~~~~~~~g~~l~s 247 (420)
T 4gga_A 179 QKRLRN--MTSHSARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQ---EVCGLRWAPDGRHLAS 247 (420)
T ss_dssp TEEEEE--ECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSS---CEEEEEECTTSSEEEE
T ss_pred CcEEEE--EeCCCCceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccccc---ceeeeeecCCCCeeee
Confidence 742111 111111223355566654444443 27778887665443322221111 01111 1224555444
Q ss_pred EccCCCCCeEEEEEeccC
Q 017140 264 DHLLLEDATMTIWVLDEN 281 (376)
Q Consensus 264 ~~~~~~~~~l~IW~l~~~ 281 (376)
.. .+..+.||.....
T Consensus 248 ~~---~D~~v~i~~~~~~ 262 (420)
T 4gga_A 248 GG---NDNLVNVWPSAPG 262 (420)
T ss_dssp EE---TTSCEEEEESSCC
T ss_pred ee---ccccceEEeeccc
Confidence 44 6678899988643
No 29
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.80 E-value=18 Score=36.46 Aligned_cols=189 Identities=12% Similarity=0.061 Sum_probs=90.2
Q ss_pred cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCC-CcEEEEEEeecCCCCCcEEEEEeCCCceEECcC
Q 017140 114 DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVS-KKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKG 192 (376)
Q Consensus 114 ~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~-~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 192 (376)
.++ .+.|+|..++... .+ -........+..+.+.+.. +.+-+.+. . ...+.+|+..++.|..+..
T Consensus 29 ~dg-~I~vwd~~~~~~~------~~--~~l~~h~~~V~~l~~s~~~~~~~l~s~s-~----Dg~I~vwd~~~~~~~~~~~ 94 (753)
T 3jro_A 29 SDK-TIKIFEVEGETHK------LI--DTLTGHEGPVWRVDWAHPKFGTILASCS-Y----DGKVLIWKEENGRWSQIAV 94 (753)
T ss_dssp TTT-EEEEEEEETTEEE------EE--EEECCCSSCEEEEEECCTTSCSEEEEEE-T----TSCEEEEEEETTEEEEEEE
T ss_pred CCC-cEEEEecCCCCCc------cc--eeccCCcCceEEEEecCCCCCCEEEEEe-C----CCeEEEEECCCCccccccc
Confidence 344 7788887644444 22 1111112233566666543 44433332 2 4579999999998766543
Q ss_pred CCCccCCCcceEEC----ceEEEEEecCCCCCCccEEEEEEcCCcce---EEEe-cChhhhccCCcc--------ceEEe
Q 017140 193 GPNYYPQRESVCVD----GFVYFRSWVSTHKNGRTVLIAFDLHEESF---RVIE-IPAKALARRSES--------ELIVY 256 (376)
Q Consensus 193 ~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~~~~il~fD~~~~~~---~~i~-lP~~~~~~~~~~--------~l~~~ 256 (376)
...+...-.++.+. |.....+..+ ..|..+|+.+..- ..+. .+.....-.... .....
T Consensus 95 ~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~ 168 (753)
T 3jro_A 95 HAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTK 168 (753)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CG
T ss_pred ccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCC
Confidence 33221111223222 4444444443 2788888876521 1111 111111000000 00011
Q ss_pred CCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cC---CeEEEeecccCCCcE
Q 017140 257 SGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RN---NELLLVPQTVSDSVY 331 (376)
Q Consensus 257 ~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~---g~ill~~~~~~~~~~ 331 (376)
+|.+.++.. .+..+.+|.+... ...+.... .+...- .. +..+. .+ |.+++.. +.+..
T Consensus 169 d~~~l~sgs---~dg~I~iwd~~~~-~~~~~~~~-~~~~h~---------~~-V~~l~~sp~~~~~~~l~s~---s~Dg~ 230 (753)
T 3jro_A 169 ESRKFVTGG---ADNLVKIWKYNSD-AQTYVLES-TLEGHS---------DW-VRDVAWSPTVLLRSYLASV---SQDRT 230 (753)
T ss_dssp GGCCEEEEE---TTSCEEEEEEETT-TTEEEEEE-EECCCS---------SC-EEEEEECCCCSSSEEEEEE---ESSSC
T ss_pred CCCEEEEEE---CCCeEEEEeccCC-cccceeee-eecCCC---------Cc-EEEEEeccCCCCCCEEEEE---ecCCE
Confidence 456666655 5678999999753 33455443 221110 11 22222 34 6666654 24567
Q ss_pred EEEEeCCCC
Q 017140 332 VIHYDVVNR 340 (376)
Q Consensus 332 l~~ydl~t~ 340 (376)
+..||+.++
T Consensus 231 I~iwd~~~~ 239 (753)
T 3jro_A 231 CIIWTQDNE 239 (753)
T ss_dssp EEEEEESSS
T ss_pred EEEecCCCC
Confidence 788888775
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.07 E-value=14 Score=33.31 Aligned_cols=141 Identities=13% Similarity=0.087 Sum_probs=72.8
Q ss_pred CcEEEEEeCCC--ceEECcCCCC------ccC-CCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEE-EecChhh
Q 017140 175 PEYRIFELGTN--SWRPLKGGPN------YYP-QRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRV-IEIPAKA 244 (376)
Q Consensus 175 ~~~~vyss~~~--~W~~~~~~~~------~~~-~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~ 244 (376)
..+..|+..++ .|+.-..... ... ....+..+|.+|...... .|.++|.++.+... .+++...
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g-------~l~a~d~~tG~~~W~~~~~~~~ 135 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKA-------QVYALNTSDGTVAWQTKVAGEA 135 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTS-------EEEEEETTTCCEEEEEECSSCC
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCC-------EEEEEECCCCCEEEEEeCCCce
Confidence 36777777766 5765322110 011 233466778888765432 89999998665432 3444322
Q ss_pred hccCCccceEEeCCeEEEEEccCCCCCeEEEEEecc-CCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEee
Q 017140 245 LARRSESELIVYSGRPAIADHLLLEDATMTIWVLDE-NDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVP 323 (376)
Q Consensus 245 ~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~-~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~ 323 (376)
.......+|.|++... .. .|+.++- .++..|.... ..+.. . ... . ..++..+|.+++-
T Consensus 136 -----~~~p~~~~~~v~v~~~----~g--~l~~~d~~tG~~~W~~~~-~~~~~-~--~~~----~-~~~~~~~~~v~~g- 194 (376)
T 3q7m_A 136 -----LSRPVVSDGLVLIHTS----NG--QLQALNEADGAVKWTVNL-DMPSL-S--LRG----E-SAPTTAFGAAVVG- 194 (376)
T ss_dssp -----CSCCEEETTEEEEECT----TS--EEEEEETTTCCEEEEEEC-CC--------CC----C-CCCEEETTEEEEC-
T ss_pred -----EcCCEEECCEEEEEcC----CC--eEEEEECCCCcEEEEEeC-CCCce-e--ecC----C-CCcEEECCEEEEE-
Confidence 1223445777776543 22 3455542 3344687642 11110 0 000 0 0111135655552
Q ss_pred cccCCCcEEEEEeCCCCcEEEEE
Q 017140 324 QTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 324 ~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
..+..++.+|+++++..+-.
T Consensus 195 ---~~~g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 195 ---GDNGRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp ---CTTTEEEEEETTTCCEEEEE
T ss_pred ---cCCCEEEEEECCCCcEEEEE
Confidence 34678999999999876653
No 31
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=85.87 E-value=29 Score=34.41 Aligned_cols=196 Identities=12% Similarity=0.019 Sum_probs=96.2
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCcc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYY 197 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 197 (376)
++++++.-|++.... .+ -..........+..+.+ ++.+.++...... ....+.+++..++.|+.+......
T Consensus 203 ~v~~~~l~t~~~~~~----lv--~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~- 273 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDT----VV--HERTGDPTTFLQSDLSR-DGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGA- 273 (695)
T ss_dssp EEEEEETTSCGGGCE----EE--ECCCCCTTCEEEEEECT-TSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSC-
T ss_pred EEEEEECCCCchhce----EE--EecCCCCEEEEEEEECC-CCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCc-
Confidence 488888888763200 22 11111101124455554 3456555533210 123444444445577765433211
Q ss_pred CCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcc---eEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEE
Q 017140 198 PQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEES---FRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMT 274 (376)
Q Consensus 198 ~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~---~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~ 274 (376)
....+..+|.+|.....+ ... ..|..+|+++.. |..+-.+.... ....+...+|.|.+... ......
T Consensus 274 -~~~~~~~~g~l~~~s~~~-~~~--~~l~~~d~~~~~~~~~~~l~~~~~~~---~l~~~~~~~~~lv~~~~---~dg~~~ 343 (695)
T 2bkl_A 274 -KYEVHAWKDRFYVLTDEG-APR--QRVFEVDPAKPARASWKEIVPEDSSA---SLLSVSIVGGHLSLEYL---KDATSE 343 (695)
T ss_dssp -CEEEEEETTEEEEEECTT-CTT--CEEEEEBTTBCSGGGCEEEECCCSSC---EEEEEEEETTEEEEEEE---ETTEEE
T ss_pred -eEEEEecCCcEEEEECCC-CCC--CEEEEEeCCCCCccCCeEEecCCCCC---eEEEEEEECCEEEEEEE---ECCEEE
Confidence 122344577765554422 111 489999997644 66653222111 01112334888877766 556788
Q ss_pred EEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cCC-eEEEeecccCCCcEEEEEeCCCCcEEEEE
Q 017140 275 IWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNN-ELLLVPQTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 275 IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g-~ill~~~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
||.++-.++ ....+.+|.. + . +..+. .+| .+++..........++.||+++++.+.+.
T Consensus 344 l~~~~~~g~---~~~~l~~~~~------~----~-v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 344 VRVATLKGK---PVRTVQLPGV------G----A-ASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEETTCC---EEEECCCSSS------S----E-ECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEEeCCCC---eeEEecCCCC------e----E-EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 888863222 1112233311 0 1 11122 345 45555433345668999999999877664
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=84.12 E-value=22 Score=31.40 Aligned_cols=187 Identities=12% Similarity=0.073 Sum_probs=89.1
Q ss_pred cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCC-CcEEEEEEeecCCCCCcEEEEEeCCCceEECcC
Q 017140 114 DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVS-KKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKG 192 (376)
Q Consensus 114 ~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~-~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 192 (376)
.++ .+.|+|..++... .+ -........+..+.+.+.. +.+-+.+ .. ...+.+|+..++.|..+..
T Consensus 31 ~dg-~i~iw~~~~~~~~------~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~-~~----dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 31 SDK-TIKIFEVEGETHK------LI--DTLTGHEGPVWRVDWAHPKFGTILASC-SY----DGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp TTS-CEEEEEEETTEEE------EE--EEECCCSSCEEEEEECCGGGCSEEEEE-ET----TSCEEEEEEETTEEEEEEE
T ss_pred CCC-cEEEEecCCCcce------ee--eEecCCCCcEEEEEeCCCCCCCEEEEe-cc----CCEEEEEEcCCCceeEeee
Confidence 344 6788887644333 22 1111111223556665432 3443333 22 4479999999998866543
Q ss_pred CCCccCCCcceEEC----ceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEEe-----------
Q 017140 193 GPNYYPQRESVCVD----GFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIVY----------- 256 (376)
Q Consensus 193 ~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~----------- 256 (376)
...+...-.++.+. |.+...+..+ ..|..+|+.+..- ..+.+..... ....+.-.
T Consensus 97 ~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 97 HAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCTT---CEEEEEECCCC--------
T ss_pred ecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCCC---ceEEEEEcCcccccccccc
Confidence 32221111222222 4444444443 2788888876522 2221111110 01111111
Q ss_pred ---CCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cC---CeEEEeecccCC
Q 017140 257 ---SGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RN---NELLLVPQTVSD 328 (376)
Q Consensus 257 ---~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~---g~ill~~~~~~~ 328 (376)
+|.+.++.. .+..+.||.+... ...|.... .+...- .. +..+. .+ |.+++... .
T Consensus 168 ~~~~~~~l~~~~---~dg~i~i~d~~~~-~~~~~~~~-~~~~h~---------~~-v~~~~~sp~~~~~~~l~s~~---~ 229 (379)
T 3jrp_A 168 GTKESRKFVTGG---ADNLVKIWKYNSD-AQTYVLES-TLEGHS---------DW-VRDVAWSPTVLLRSYLASVS---Q 229 (379)
T ss_dssp --CTTCEEEEEE---TTSCEEEEEEETT-TTEEEEEE-EECCCS---------SC-EEEEEECCCCSSSEEEEEEE---T
T ss_pred CCCCCCEEEEEe---CCCeEEEEEecCC-CcceeeEE-EEeccc---------Cc-EeEEEECCCCCCCCeEEEEe---C
Confidence 466666655 5678999999743 33455543 222110 11 22222 34 66666542 4
Q ss_pred CcEEEEEeCCCCc
Q 017140 329 SVYVIHYDVVNRS 341 (376)
Q Consensus 329 ~~~l~~ydl~t~~ 341 (376)
+..+..||+++++
T Consensus 230 dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 230 DRTCIIWTQDNEQ 242 (379)
T ss_dssp TSCEEEEEESSTT
T ss_pred CCEEEEEeCCCCC
Confidence 5667777777753
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=83.56 E-value=22 Score=32.73 Aligned_cols=138 Identities=11% Similarity=0.063 Sum_probs=70.1
Q ss_pred cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCC
Q 017140 114 DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGG 193 (376)
Q Consensus 114 ~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~ 193 (376)
.++ .+.|||..+++.. .+ -........+..+.+.|..+.+-+.+ .. ...+.+++.+++.-+.....
T Consensus 140 ~dg-~i~lWd~~~~~~~------~~--~~~~gH~~~V~~l~f~p~~~~~l~s~-s~----D~~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 140 KGG-DIMLWNFGIKDKP------TF--IKGIGAGGSITGLKFNPLNTNQFYAS-SM----EGTTRLQDFKGNILRVFASS 205 (435)
T ss_dssp TTS-CEEEECSSCCSCC------EE--ECCCSSSCCCCEEEECSSCTTEEEEE-CS----SSCEEEEETTSCEEEEEECC
T ss_pred CCC-EEEEEECCCCCce------eE--EEccCCCCCEEEEEEeCCCCCEEEEE-eC----CCEEEEeeccCCceeEEecc
Confidence 445 8999999888765 33 12211222346777777655554333 21 34688888887755443322
Q ss_pred CCccCCCcceE--ECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEEe--CCe-EEEEEccCC
Q 017140 194 PNYYPQRESVC--VDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIVY--SGR-PAIADHLLL 268 (376)
Q Consensus 194 ~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~--~G~-L~l~~~~~~ 268 (376)
........++. -+|.+...+..+ ..|..+|+.+.....+.... ..+.-+.. +|. +.+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~~~~~h~------~~v~~v~~~p~~~~~~~s~s--- 270 (435)
T 4e54_B 206 DTINIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGKELWNLRMHK------KKVTHVALNPCCDWFLATAS--- 270 (435)
T ss_dssp SSCSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSCBCCCSBCCS------SCEEEEEECTTCSSEEEEEE---
T ss_pred CCCCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcceeEEEeccc------ceEEeeeecCCCceEEEEec---
Confidence 21111111222 255555444433 26888888765433222111 11111221 333 444444
Q ss_pred CCCeEEEEEecc
Q 017140 269 EDATMTIWVLDE 280 (376)
Q Consensus 269 ~~~~l~IW~l~~ 280 (376)
.+..+.||-+..
T Consensus 271 ~d~~v~iwd~~~ 282 (435)
T 4e54_B 271 VDQTVKIWDLRQ 282 (435)
T ss_dssp TTSBCCEEETTT
T ss_pred CcceeeEEeccc
Confidence 567889998764
No 34
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=82.68 E-value=42 Score=33.61 Aligned_cols=168 Identities=13% Similarity=0.083 Sum_probs=89.6
Q ss_pred EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC--c-eEECcCCCCccCCCcceE-ECceEEEEEecCCCCCCccEEE
Q 017140 151 NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN--S-WRPLKGGPNYYPQRESVC-VDGFVYFRSWVSTHKNGRTVLI 226 (376)
Q Consensus 151 ~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~--~-W~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~~~~il 226 (376)
..+.+.+ ++.+.++...........+.+++..++ . |+.+...... ....+. -++.+|+...... .. ..|.
T Consensus 271 ~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~~~~~~~dg~~l~~~s~~~~-~~--~~l~ 344 (741)
T 1yr2_A 271 HGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA--QWDFVDGVGDQLWFVSGDGA-PL--KKIV 344 (741)
T ss_dssp EEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS--CEEEEEEETTEEEEEECTTC-TT--CEEE
T ss_pred EEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc--eEEEEeccCCEEEEEECCCC-CC--CEEE
Confidence 4444443 455655554322113567888888877 6 8776543211 111223 3456777765432 11 4899
Q ss_pred EEEcCC--cceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccc
Q 017140 227 AFDLHE--ESFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEE 304 (376)
Q Consensus 227 ~fD~~~--~~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~ 304 (376)
..|+++ +.|..+- |.... ....+...++.|.+... ......||+++-.+ + ....+.+|.. +
T Consensus 345 ~~d~~~~~~~~~~l~-~~~~~---~l~~~~~~~~~lv~~~~---~dg~~~l~~~~~~g-~--~~~~l~~~~~------~- 407 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVV-PESKD---NLESVGIAGNRLFASYI---HDAKSQVLAFDLDG-K--PAGAVSLPGI------G- 407 (741)
T ss_dssp EEECSSSSCEEEEEE-CCCSS---EEEEEEEEBTEEEEEEE---ETTEEEEEEEETTS-C--EEEECBCSSS------C-
T ss_pred EEeCCCCccccEEEe-cCCCC---eEEEEEEECCEEEEEEE---ECCEEEEEEEeCCC-C--ceeeccCCCC------e-
Confidence 999987 5676653 32211 01112334788877766 55677888886322 2 1112233321 1
Q ss_pred cccceeEEee--cCCe-EEEeecccCCCcEEEEEeCCCCcEEEE
Q 017140 305 DIDYFVDCIG--RNNE-LLLVPQTVSDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 305 ~~~~~~~~~~--~~g~-ill~~~~~~~~~~l~~ydl~t~~~~~v 345 (376)
. +..+. .+|+ +++..........++.||+.+++.+.+
T Consensus 408 ---~-v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 408 ---S-ASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp ---E-EEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred ---E-EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 1 22222 3454 666544344567899999999886554
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=82.58 E-value=26 Score=31.26 Aligned_cols=184 Identities=10% Similarity=0.057 Sum_probs=96.0
Q ss_pred cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCC
Q 017140 114 DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGG 193 (376)
Q Consensus 114 ~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~ 193 (376)
.++ .+.|+|..+++.. .. -........+..+.+.+..+.+-+.+ .. ...+.+++..+...+.....
T Consensus 94 ~dg-~i~iwd~~~~~~~------~~--~~~~~h~~~v~~~~~~~~~~~~l~s~-~~----d~~i~iwd~~~~~~~~~~~~ 159 (383)
T 3ei3_B 94 KGG-DIILWDYDVQNKT------SF--IQGMGPGDAITGMKFNQFNTNQLFVS-SI----RGATTLRDFSGSVIQVFAKT 159 (383)
T ss_dssp BTS-CEEEEETTSTTCE------EE--ECCCSTTCBEEEEEEETTEEEEEEEE-ET----TTEEEEEETTSCEEEEEECC
T ss_pred CCC-eEEEEeCCCcccc------ee--eecCCcCCceeEEEeCCCCCCEEEEE-eC----CCEEEEEECCCCceEEEecc
Confidence 455 7899999988877 44 22211222346666666433443333 22 45788888887665554332
Q ss_pred CCccC--CCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCCe-EEEEEccCCC
Q 017140 194 PNYYP--QRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSGR-PAIADHLLLE 269 (376)
Q Consensus 194 ~~~~~--~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G~-L~l~~~~~~~ 269 (376)
..... ..-...-+|.....+..+ ..|..+|+..+....+...... ...+. .-+|. +.+... .
T Consensus 160 ~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~~~-----v~~~~~~~~~~~~l~s~~---~ 225 (383)
T 3ei3_B 160 DSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHKAK-----VTHAEFNPRCDWLMATSS---V 225 (383)
T ss_dssp CCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSSSC-----EEEEEECSSCTTEEEEEE---T
T ss_pred CCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCCCc-----EEEEEECCCCCCEEEEEe---C
Confidence 21111 011112245544444433 3899999976655555432221 11122 22444 555555 6
Q ss_pred CCeEEEEEeccCCC-CCeEEEEEEcCCCcccccccccccceeEEee--c-CCeEEEeecccCCCcEEEEEeCCCCcE
Q 017140 270 DATMTIWVLDENDG-DYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--R-NNELLLVPQTVSDSVYVIHYDVVNRSM 342 (376)
Q Consensus 270 ~~~l~IW~l~~~~~-~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~-~g~ill~~~~~~~~~~l~~ydl~t~~~ 342 (376)
+..+.||.+..... +.-... +... .. +..+. . +|..++... .+..+..||+++.+.
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~---~~~~----------~~-v~~~~~s~~~~~~l~~~~---~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAE---MPHE----------KP-VNAAYFNPTDSTKLLTTD---QRNEIRVYSSYDWSK 285 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEE---EECS----------SC-EEEEEECTTTSCEEEEEE---SSSEEEEEETTBTTS
T ss_pred CCEEEEEeCCCCCcccceEEE---ecCC----------Cc-eEEEEEcCCCCCEEEEEc---CCCcEEEEECCCCcc
Confidence 78899999986422 122221 1111 11 22222 4 777777642 567899999987664
No 36
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=77.82 E-value=34 Score=29.59 Aligned_cols=187 Identities=12% Similarity=0.017 Sum_probs=93.7
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCcc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYY 197 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 197 (376)
+++.+||.+++.. .+ .... ...++.+++..+ + ++.. ...+.+|+..++.++.+.......
T Consensus 36 ~i~~~d~~~~~~~------~~--~~~~----~~~~i~~~~dG~-l-~v~~------~~~l~~~d~~~g~~~~~~~~~~~~ 95 (297)
T 3g4e_A 36 KVCRWDSFTKQVQ------RV--TMDA----PVSSVALRQSGG-Y-VATI------GTKFCALNWKEQSAVVLATVDNDK 95 (297)
T ss_dssp EEEEEETTTCCEE------EE--ECSS----CEEEEEEBTTSS-E-EEEE------TTEEEEEETTTTEEEEEEECCTTC
T ss_pred EEEEEECCCCcEE------EE--eCCC----ceEEEEECCCCC-E-EEEE------CCeEEEEECCCCcEEEEEecCCCC
Confidence 7899999998876 55 2211 125677776443 3 3222 236888898888877654332111
Q ss_pred C--CCcceEE--CceEEEEEecCCCC-----CCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCC-eEEEEEcc
Q 017140 198 P--QRESVCV--DGFVYFRSWVSTHK-----NGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSG-RPAIADHL 266 (376)
Q Consensus 198 ~--~~~~v~~--~G~lyw~~~~~~~~-----~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G-~L~l~~~~ 266 (376)
. ....+.+ +|.+|+........ .....|..+|.+.. ...+. .... ...-+. .-+| .|+++..
T Consensus 96 ~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~---~pngi~~spdg~~lyv~~~- 168 (297)
T 3g4e_A 96 KNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVD---ISNGLDWSLDHKIFYYIDS- 168 (297)
T ss_dssp SSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEES---BEEEEEECTTSCEEEEEEG-
T ss_pred CCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--eccc---cccceEEcCCCCEEEEecC-
Confidence 1 1122333 68866654332110 11147888888643 32221 0000 011112 2245 5777766
Q ss_pred CCCCCeEEEEEeccCCCCCeEEE--EEEcCCCcccccccccccceeEE--eecCCeEEEeecccCCCcEEEEEeCCCCcE
Q 017140 267 LLEDATMTIWVLDENDGDYWVQI--KVFLPEDYGEEILEEDIDYFVDC--IGRNNELLLVPQTVSDSVYVIHYDVVNRSM 342 (376)
Q Consensus 267 ~~~~~~l~IW~l~~~~~~~W~~~--~~~lp~~~~~~~~~~~~~~~~~~--~~~~g~ill~~~~~~~~~~l~~ydl~t~~~ 342 (376)
....+.+|.++. ..+..... ...++.. .+ . +.- +..+|.|++... ....|..||++++++
T Consensus 169 --~~~~i~~~~~d~-~~G~~~~~~~~~~~~~~-----~~----~-p~g~~~d~~G~lwva~~---~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 169 --LSYSVDAFDYDL-QTGQISNRRSVYKLEKE-----EQ----I-PDGMCIDAEGKLWVACY---NGGRVIRLDPVTGKR 232 (297)
T ss_dssp --GGTEEEEEEECT-TTCCEEEEEEEEECCGG-----GC----E-EEEEEEBTTSCEEEEEE---TTTEEEEECTTTCCE
T ss_pred --CCCcEEEEeccC-CCCcccCcEEEEECCCC-----CC----C-CCeeEECCCCCEEEEEc---CCCEEEEEcCCCceE
Confidence 445565665531 23333322 2233321 01 1 222 236788777542 356799999996664
Q ss_pred -EEEEE
Q 017140 343 -RRAEI 347 (376)
Q Consensus 343 -~~v~~ 347 (376)
+.+..
T Consensus 233 ~~~i~~ 238 (297)
T 3g4e_A 233 LQTVKL 238 (297)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 55544
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=76.83 E-value=43 Score=30.25 Aligned_cols=141 Identities=9% Similarity=0.070 Sum_probs=75.3
Q ss_pred eeEE-EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCc
Q 017140 108 NGII-LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNS 186 (376)
Q Consensus 108 ~Gll-~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~ 186 (376)
+.++ ...++ .+.|+|..+++.. .+ -... ....+..+.+.+ ++.+-+++. . ...+.+|+..++.
T Consensus 104 ~~l~~~~~d~-~v~lw~~~~~~~~------~~--~~~~-~~~~v~~v~~s~-~~~~l~~~~-~----dg~i~iwd~~~~~ 167 (401)
T 4aez_A 104 LNVVAVALER-NVYVWNADSGSVS------AL--AETD-ESTYVASVKWSH-DGSFLSVGL-G----NGLVDIYDVESQT 167 (401)
T ss_dssp TSEEEEEETT-EEEEEETTTCCEE------EE--EECC-TTCCEEEEEECT-TSSEEEEEE-T----TSCEEEEETTTCC
T ss_pred CCEEEEECCC-eEEEeeCCCCcEe------Ee--eecC-CCCCEEEEEECC-CCCEEEEEC-C----CCeEEEEECcCCe
Confidence 4455 55666 8999999999887 44 2221 112235666666 444544332 1 3478899888774
Q ss_pred eEECcCCCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcce--EEEecChhhhccCCccceEE-eCCeEEEE
Q 017140 187 WRPLKGGPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESF--RVIEIPAKALARRSESELIV-YSGRPAIA 263 (376)
Q Consensus 187 W~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~--~~i~lP~~~~~~~~~~~l~~-~~G~L~l~ 263 (376)
-...-. .+...-..+..+|.....+..+ ..|..+|+....- ..+...... ...+.- -+|.+.+.
T Consensus 168 ~~~~~~--~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 168 KLRTMA--GHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQGHSSE-----VCGLAWRSDGLQLAS 234 (401)
T ss_dssp EEEEEC--CCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSSC-----EEEEEECTTSSEEEE
T ss_pred EEEEec--CCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcCCCCC-----eeEEEEcCCCCEEEE
Confidence 322111 1111223345566655555544 3899999974332 222221111 111111 15665555
Q ss_pred EccCCCCCeEEEEEecc
Q 017140 264 DHLLLEDATMTIWVLDE 280 (376)
Q Consensus 264 ~~~~~~~~~l~IW~l~~ 280 (376)
.. .+..+.||-+..
T Consensus 235 ~~---~d~~v~iwd~~~ 248 (401)
T 4aez_A 235 GG---NDNVVQIWDARS 248 (401)
T ss_dssp EE---TTSCEEEEETTC
T ss_pred Ee---CCCeEEEccCCC
Confidence 55 567899998864
No 38
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=76.20 E-value=43 Score=29.93 Aligned_cols=115 Identities=11% Similarity=0.183 Sum_probs=64.0
Q ss_pred CcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEE-EecChhhh-----ccCCccceEEeCCeEEEEEccCCCCCeE
Q 017140 200 RESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRV-IEIPAKAL-----ARRSESELIVYSGRPAIADHLLLEDATM 273 (376)
Q Consensus 200 ~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~-----~~~~~~~l~~~~G~L~l~~~~~~~~~~l 273 (376)
..++..+|.+|...... .|.+||.++.+... .+++.... ...........+|.|++... . ..
T Consensus 47 ~~p~v~~~~v~~~~~~g-------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~-g~- 114 (376)
T 3q7m_A 47 LHPALADNVVYAADRAG-------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---K-AQ- 114 (376)
T ss_dssp CCCEEETTEEEEECTTS-------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---T-SE-
T ss_pred eccEEECCEEEEEcCCC-------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---C-CE-
Confidence 46788999999875432 89999997665432 34432210 00112334566888888754 2 33
Q ss_pred EEEEecc-CCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEEEE
Q 017140 274 TIWVLDE-NDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 274 ~IW~l~~-~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v 345 (376)
|..++. .++..|... ++.. ... .. .+ .+|.+++. ..+..++.+|+++++..+-
T Consensus 115 -l~a~d~~tG~~~W~~~---~~~~----~~~---~p---~~-~~~~v~v~----~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 115 -VYALNTSDGTVAWQTK---VAGE----ALS---RP---VV-SDGLVLIH----TSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp -EEEEETTTCCEEEEEE---CSSC----CCS---CC---EE-ETTEEEEE----CTTSEEEEEETTTCCEEEE
T ss_pred -EEEEECCCCCEEEEEe---CCCc----eEc---CC---EE-ECCEEEEE----cCCCeEEEEECCCCcEEEE
Confidence 444542 234468653 2221 111 11 22 35656653 2466899999998886654
No 39
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=73.29 E-value=43 Score=28.57 Aligned_cols=66 Identities=11% Similarity=0.161 Sum_probs=40.6
Q ss_pred ceeeEE-EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCC
Q 017140 106 SVNGII-LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGT 184 (376)
Q Consensus 106 s~~Gll-~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~ 184 (376)
|.+|+| ...+. .+.|||..|++.. .+ -........+..+.+.+. +.+-+.+. ....+.+++..+
T Consensus 34 S~~~~lAvg~D~-tV~iWd~~tg~~~------~~--~~~~~~~~~V~~v~~~~~-~~~l~sgs-----~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 34 SSGNVLAVALDN-SVYLWSASSGDIL------QL--LQMEQPGEYISSVAWIKE-GNYLAVGT-----SSAEVQLWDVQQ 98 (318)
T ss_dssp CTTSEEEEEETT-EEEEEETTTCCEE------EE--EECCSTTCCEEEEEECTT-SSEEEEEE-----TTSEEEEEETTT
T ss_pred CCCCEEEEEeCC-EEEEEECCCCCEE------EE--EEecCCCCeEEEEEECCC-CCEEEEEE-----CCCcEEEeecCC
Confidence 567788 66666 8999999999877 43 122122222356666663 34444332 144788888887
Q ss_pred Cc
Q 017140 185 NS 186 (376)
Q Consensus 185 ~~ 186 (376)
+.
T Consensus 99 ~~ 100 (318)
T 4ggc_A 99 QK 100 (318)
T ss_dssp TE
T ss_pred ce
Confidence 74
No 40
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=71.25 E-value=53 Score=28.74 Aligned_cols=120 Identities=12% Similarity=0.054 Sum_probs=61.6
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCCcceEEEec-ChhhhccCCccceE-EeCCe-EEEEEccCCCCCeEEEEEeccCC
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEI-PAKALARRSESELI-VYSGR-PAIADHLLLEDATMTIWVLDEND 282 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~l-P~~~~~~~~~~~l~-~~~G~-L~l~~~~~~~~~~l~IW~l~~~~ 282 (376)
+|.+|........ ..|..+|+.+.....+.. +.... ....+. .-+|+ |++... ....+.+|.++..+
T Consensus 50 dg~l~~~~~~~~~----~~v~~~~~~~g~~~~~~~~~~~~~---~p~~~a~spdg~~l~~~~~---~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 50 KDCLYSVDKEDDE----GGIAAWQIDGQTAHKLNTVVAPGT---PPAYVAVDEARQLVYSANY---HKGTAEVMKIAADG 119 (347)
T ss_dssp TCEEEEEEEETTE----EEEEEEEEETTEEEEEEEEEEESC---CCSEEEEETTTTEEEEEET---TTTEEEEEEECTTS
T ss_pred CCeEEEEEecCCC----ceEEEEEecCCcEEEeeeeecCCC---CCEEEEECCCCCEEEEEeC---CCCEEEEEEeCCCC
Confidence 7887777653110 379999998777766532 22111 112222 33565 666655 56789999997532
Q ss_pred CCCeEEEE-EEcCCC--cccccccccccceeEEee--cCCeEEEeecccCCCcEEEEEeCC-CCcEEEE
Q 017140 283 GDYWVQIK-VFLPED--YGEEILEEDIDYFVDCIG--RNNELLLVPQTVSDSVYVIHYDVV-NRSMRRA 345 (376)
Q Consensus 283 ~~~W~~~~-~~lp~~--~~~~~~~~~~~~~~~~~~--~~g~ill~~~~~~~~~~l~~ydl~-t~~~~~v 345 (376)
....+. +..... ..+ ... .. +..+. .+|++ ++.. .....+..||++ ++++..+
T Consensus 120 --~~~~~~~~~~~~~~p~~~-~~~---~~-~~~~~~spdg~l-~v~~--~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 120 --ALTLTDTVQHSGHGPRPE-QDG---SH-IHYTDLTPDNRL-AVID--LGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp --CEEEEEEEECCCCCSSTT-CSS---CC-EEEEEECTTSCE-EEEE--TTTTEEEEEEECTTSCEEEE
T ss_pred --CeeecceeecCCCCCCcc-ccC---CC-ceEEEECCCCcE-EEEe--CCCCEEEEEEECCCCcEEEe
Confidence 233332 221100 000 000 11 22222 67774 4432 245678889988 6666654
No 41
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=70.64 E-value=48 Score=27.98 Aligned_cols=187 Identities=7% Similarity=0.004 Sum_probs=92.9
Q ss_pred eeeEE-Eec-CCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCC
Q 017140 107 VNGII-LMD-FGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGT 184 (376)
Q Consensus 107 ~~Gll-~~~-~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~ 184 (376)
.+|.+ +.. ....++++|| +++.. .+..|.. .....++..|+.. . +..... ....+.+|+. +
T Consensus 108 ~~g~l~v~~~~~~~i~~~d~-~g~~~------~~~~~~~---~~~~~~i~~~~~g-~--l~v~~~---~~~~i~~~~~-~ 170 (299)
T 2z2n_A 108 PNGDIWFTEMNGNRIGRITD-DGKIR------EYELPNK---GSYPSFITLGSDN-A--LWFTEN---QNNAIGRITE-S 170 (299)
T ss_dssp TTSCEEEEETTTTEEEEECT-TCCEE------EEECSST---TCCEEEEEECTTS-C--EEEEET---TTTEEEEECT-T
T ss_pred CCCCEEEEecCCceEEEECC-CCCEE------EecCCCC---CCCCceEEEcCCC-C--EEEEeC---CCCEEEEEcC-C
Confidence 35555 332 2237899999 77766 4411221 1112566677543 2 222111 1345677777 6
Q ss_pred CceEECcCCCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE-eCCeEE
Q 017140 185 NSWRPLKGGPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV-YSGRPA 261 (376)
Q Consensus 185 ~~W~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~-~~G~L~ 261 (376)
+......... ......++.+ +|.+|+..... ..|..+|. +..+..+.+|.... ....+.. -+|.|+
T Consensus 171 g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~---~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 171 GDITEFKIPT-PASGPVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIPTPNA---RPHAITAGAGIDLW 239 (299)
T ss_dssp CCEEEEECSS-TTCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC---CEEEEEECSTTCEE
T ss_pred CcEEEeeCCC-CCCcceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECCCCCC---CceeEEECCCCCEE
Confidence 6665432111 1111223444 47876654333 38999999 77777776663222 1222333 368888
Q ss_pred EEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCc
Q 017140 262 IADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRS 341 (376)
Q Consensus 262 l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~ 341 (376)
+... ....+.++..+ +. ...+.++.... . ..-..+ .+|.+++.. ....+..||+++++
T Consensus 240 v~~~---~~~~i~~~d~~----g~--~~~~~~~~~~~----~----~~~i~~-~~g~l~v~~----~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 240 FTEW---GANKIGRLTSN----NI--IEEYPIQIKSA----E----PHGICF-DGETIWFAM----ECDKIGKLTLIKDN 297 (299)
T ss_dssp EEET---TTTEEEEEETT----TE--EEEEECSSSSC----C----EEEEEE-CSSCEEEEE----TTTEEEEEEEC---
T ss_pred Eecc---CCceEEEECCC----Cc--eEEEeCCCCCC----c----cceEEe-cCCCEEEEe----cCCcEEEEEcCccc
Confidence 8875 44555555441 21 12233442211 0 101122 688888853 35689999999887
Q ss_pred EE
Q 017140 342 MR 343 (376)
Q Consensus 342 ~~ 343 (376)
++
T Consensus 298 ~~ 299 (299)
T 2z2n_A 298 ME 299 (299)
T ss_dssp --
T ss_pred CC
Confidence 54
No 42
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=69.87 E-value=58 Score=28.68 Aligned_cols=109 Identities=14% Similarity=0.212 Sum_probs=54.6
Q ss_pred EEEEEEcCCcceEEEe-cChhhhccCCccceE-EeCCe-EEEEEccCCC-CCeEEEEEeccCCCCCeEEEEEEcCCCccc
Q 017140 224 VLIAFDLHEESFRVIE-IPAKALARRSESELI-VYSGR-PAIADHLLLE-DATMTIWVLDENDGDYWVQIKVFLPEDYGE 299 (376)
Q Consensus 224 ~il~fD~~~~~~~~i~-lP~~~~~~~~~~~l~-~~~G~-L~l~~~~~~~-~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~ 299 (376)
.|..+|+.+..+..+. ++...........+. .-+|+ |++... . ...+.||.++.. .+.+..+. .++.. .
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~---~~~~~i~v~~~~~~-~g~~~~~~-~~~~g--~ 306 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR---LKADGVAIFKVDET-NGTLTKVG-YQLTG--I 306 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC---SSSCEEEEEEECTT-TCCEEEEE-EEECS--S
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC---CCCCEEEEEEEcCC-CCcEEEee-EecCC--C
Confidence 7888998877665542 211111000111222 23565 444433 4 678999999632 34455542 22211 0
Q ss_pred ccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEEEEE
Q 017140 300 EILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 300 ~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
.. .. + .+..+|+.+++.......-.++.+|+++++++.+.
T Consensus 307 -~~----~~-~-~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 307 -HP----RN-F-IITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp -CC----CE-E-EECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred -CC----ce-E-EECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 00 01 1 12267876666532223334566888899887763
No 43
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=69.11 E-value=56 Score=28.19 Aligned_cols=184 Identities=11% Similarity=0.063 Sum_probs=91.0
Q ss_pred cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCce--EECc
Q 017140 114 DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSW--RPLK 191 (376)
Q Consensus 114 ~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W--~~~~ 191 (376)
.+. .+.++|+.|++.. ... +.. ... .++.+++.. .+.++.... ...+.+++..++.- +.+.
T Consensus 18 ~~~-~v~~~d~~~~~~~------~~~-~~~---~~~-~~~~~s~dg-~~l~~~~~~----~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 18 HLR-RISFFSTDTLEIL------NQI-TLG---YDF-VDTAITSDC-SNVVVTSDF----CQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp GGT-EEEEEETTTCCEE------EEE-ECC---CCE-EEEEECSSS-CEEEEEEST----TCEEEEEECSSSSCEEEEEE
T ss_pred CCC-eEEEEeCccccee------eeE-Ecc---CCc-ceEEEcCCC-CEEEEEeCC----CCeEEEEECCCCceeEEecc
Confidence 344 8999999999886 330 211 112 256666643 343333221 34788888888753 2221
Q ss_pred CCCCccCCC-cceEECce-EEEEEecCCCCCCccEEEEEEcCCcceE-EEecChhhhccCCccceEEeCCe-EEEEEccC
Q 017140 192 GGPNYYPQR-ESVCVDGF-VYFRSWVSTHKNGRTVLIAFDLHEESFR-VIEIPAKALARRSESELIVYSGR-PAIADHLL 267 (376)
Q Consensus 192 ~~~~~~~~~-~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~~~G~-L~l~~~~~ 267 (376)
... .+.. -.+.-+|. +| ........ ..|..+|+.+.+.. .++...... .+ ...-+|+ |++...
T Consensus 81 ~~~--~~~~~~~~s~dg~~l~-~~~~~~~~---~~i~v~d~~~~~~~~~~~~~~~~~----~~-~~spdg~~l~~~~~-- 147 (331)
T 3u4y_A 81 EGQ--SSMADVDITPDDQFAV-TVTGLNHP---FNMQSYSFLKNKFISTIPIPYDAV----GI-AISPNGNGLILIDR-- 147 (331)
T ss_dssp ECS--SCCCCEEECTTSSEEE-ECCCSSSS---CEEEEEETTTTEEEEEEECCTTEE----EE-EECTTSSCEEEEEE--
T ss_pred cCC--CCccceEECCCCCEEE-EecCCCCc---ccEEEEECCCCCeEEEEECCCCcc----ce-EECCCCCEEEEEec--
Confidence 111 0111 11223455 44 33322111 27999999876653 344332211 11 1223554 666655
Q ss_pred CCCCe-EEEEEeccCCCCCeEEE-EEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcE
Q 017140 268 LEDAT-MTIWVLDENDGDYWVQI-KVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSM 342 (376)
Q Consensus 268 ~~~~~-l~IW~l~~~~~~~W~~~-~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~ 342 (376)
.... +.+|.++..+ .-... ...++.. . .. ..+.. .+|+.+++.. .....+..||+++++.
T Consensus 148 -~~~~~i~~~~~~~~g--~~~~~~~~~~~~~-----~----~~-~~~~~spdg~~l~v~~--~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 148 -SSANTVRRFKIDADG--VLFDTGQEFISGG-----T----RP-FNITFTPDGNFAFVAN--LIGNSIGILETQNPEN 210 (331)
T ss_dssp -TTTTEEEEEEECTTC--CEEEEEEEEECSS-----S----SE-EEEEECTTSSEEEEEE--TTTTEEEEEECSSTTS
T ss_pred -CCCceEEEEEECCCC--cEeecCCccccCC-----C----Cc-cceEECCCCCEEEEEe--CCCCeEEEEECCCCcc
Confidence 4455 9999997532 22111 1122211 0 11 11222 6777444432 2467899999998874
No 44
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=68.22 E-value=91 Score=30.27 Aligned_cols=194 Identities=13% Similarity=0.099 Sum_probs=99.4
Q ss_pred eeEEEEcCCC------CceeeCCCceeecCC-CCCCccceeEEEeEeCCCCcEEEEEEeecCC---CCCcEEEEEeC-CC
Q 017140 117 LYATLCNPST------RQTFNTPFVCSLTSP-SVNSTYFCVNSFGFDPVSKKYKVLNSWAIPG---RDPEYRIFELG-TN 185 (376)
Q Consensus 117 ~~~~V~NP~T------~~~~~~p~~~~L~~P-~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~---~~~~~~vyss~-~~ 185 (376)
..++++|..+ ++.. .| . .... ....+.+.| ++++.++....... ....+.+++.. ++
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~------~l--~~~~~~---~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVR------EL--SDDAHR---FVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSE------ES--SCSCSS---EECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred eEEEEEECCCCccccCCcee------EE--EecCCC---cccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 3789999988 7777 66 4 2211 113334444 34454433322111 13478888988 57
Q ss_pred ---ceEECcCCCCccCCCcceE-ECceEEEEEecCCCCCCccEEEEEEcCCcceEEE-ecChhhhccCC---ccceEEe-
Q 017140 186 ---SWRPLKGGPNYYPQRESVC-VDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVI-EIPAKALARRS---ESELIVY- 256 (376)
Q Consensus 186 ---~W~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~---~~~l~~~- 256 (376)
..+.+...... ......+ -+|.+|+....+. ...|..+|+++.++..+ +.........+ ...+...
T Consensus 229 ~~~~~~~l~~~~~~-~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~ 303 (662)
T 3azo_A 229 RFADTRTLLGGPEE-AIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA 303 (662)
T ss_dssp CEEEEEEEEEETTB-CEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT
T ss_pred cccccEEeCCCCCc-eEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeC
Confidence 33333221110 0111122 2788887765432 14799999977776654 22111110000 1122333
Q ss_pred CCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEe-e-cCCeEEEeecccCCCcEEEE
Q 017140 257 SGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCI-G-RNNELLLVPQTVSDSVYVIH 334 (376)
Q Consensus 257 ~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~-~-~~g~ill~~~~~~~~~~l~~ 334 (376)
+|++.+... . ....||.++-.+ +... .+..... . +..+ . ..+.+++..........++.
T Consensus 304 ~~~~~~~~~---~-~~~~l~~~d~~~-~~~~----~l~~~~~---------~-~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 304 NGLIAVVHG---K-GAAVLGILDPES-GELV----DAAGPWT---------E-WAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp TSCEEEEEB---S-SSCEEEEEETTT-TEEE----ECCSSCC---------E-EEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEE---c-CccEEEEEECCC-CcEE----EecCCCC---------e-EEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 678776665 5 778899986432 2221 2222111 1 2222 3 34556666533334557899
Q ss_pred EeCCCCcEEEEE
Q 017140 335 YDVVNRSMRRAE 346 (376)
Q Consensus 335 ydl~t~~~~~v~ 346 (376)
+|+++++.+.+.
T Consensus 365 ~d~~~g~~~~l~ 376 (662)
T 3azo_A 365 LDTVTGRARTIG 376 (662)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCceEEee
Confidence 999999987764
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=65.97 E-value=70 Score=28.16 Aligned_cols=135 Identities=11% Similarity=0.015 Sum_probs=58.1
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCc-eEECcCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNS-WRPLKGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~-W~~~~~~~~~ 196 (376)
.+.|+|..++++. .+ -........+..+.+.+. +.+-+.+. . ...+.+|+..++. |........+
T Consensus 34 ~i~iw~~~~~~~~------~~--~~~~~h~~~v~~~~~s~~-~~~l~s~s-~----d~~v~vwd~~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 34 QVELYEQDGNGWK------HA--RTFSDHDKIVTCVDWAPK-SNRIVTCS-Q----DRNAYVYEKRPDGTWKQTLVLLRL 99 (377)
T ss_dssp CBCEEEEETTEEE------EC--CCBCCCSSCEEEEEECTT-TCCEEEEE-T----TSSEEEC------CCCCEEECCCC
T ss_pred EEEEEEccCCceE------EE--EEEecCCceEEEEEEeCC-CCEEEEEe-C----CCeEEEEEcCCCCceeeeeEeccc
Confidence 7888898888654 33 222222223456666664 33333332 1 4478888888876 5433222111
Q ss_pred cCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcc----eEEEecChhhhccCCccceEE-eCCeEEEEEccCCC
Q 017140 197 YPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEES----FRVIEIPAKALARRSESELIV-YSGRPAIADHLLLE 269 (376)
Q Consensus 197 ~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~----~~~i~lP~~~~~~~~~~~l~~-~~G~L~l~~~~~~~ 269 (376)
...-..+.+ +|.....+..+ ..|..+|+.+.. ...+..|... ....+.- -+|.+.+... .
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~~~~---~ 166 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRPLRS----TILSLDWHPNNVLLAAGC---A 166 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSSCCS----CEEEEEECTTSSEEEEEE---S
T ss_pred CCceEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecccCC----CeEEEEEcCCCCEEEEEe---C
Confidence 111111111 34433333332 267778887654 3444432111 0111221 2455555545 5
Q ss_pred CCeEEEEEec
Q 017140 270 DATMTIWVLD 279 (376)
Q Consensus 270 ~~~l~IW~l~ 279 (376)
+..+.+|.+.
T Consensus 167 d~~i~iwd~~ 176 (377)
T 3dwl_C 167 DRKAYVLSAY 176 (377)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 6789999985
No 46
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=65.11 E-value=72 Score=27.99 Aligned_cols=187 Identities=9% Similarity=0.024 Sum_probs=96.8
Q ss_pred eeEEEEcCCCCceeeCCCceeecCCCC--CCccce-eEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCce-EECcC
Q 017140 117 LYATLCNPSTRQTFNTPFVCSLTSPSV--NSTYFC-VNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSW-RPLKG 192 (376)
Q Consensus 117 ~~~~V~NP~T~~~~~~p~~~~L~~P~~--~~~~~~-~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~~~ 192 (376)
..+.++||.|++... .+ +.. ...... ..++.++. ....+.... ...+.+++..+++- +.+..
T Consensus 17 ~~l~~~d~~t~~~~~-----~i--~~~~n~~~lg~~~~~i~~~~---~~lyv~~~~----~~~v~viD~~t~~~~~~i~~ 82 (328)
T 3dsm_A 17 ATLSYYDPATCEVEN-----EV--FYRANGFKLGDVAQSMVIRD---GIGWIVVNN----SHVIFAIDINTFKEVGRITG 82 (328)
T ss_dssp BEEEEEETTTTEEEC-----SH--HHHHHSSCCBSCEEEEEEET---TEEEEEEGG----GTEEEEEETTTCCEEEEEEC
T ss_pred ceEEEEECCCCEEhh-----hh--HhhhcCcccCccceEEEEEC---CEEEEEEcC----CCEEEEEECcccEEEEEcCC
Confidence 379999999999871 11 100 000001 13444443 222222222 44788899888854 33322
Q ss_pred CCCccCCCcceE--ECceEEEEEecCCCCCCccEEEEEEcCCcceE-EEecChhhhccCCccceEEeCCeEEEEEccCCC
Q 017140 193 GPNYYPQRESVC--VDGFVYFRSWVSTHKNGRTVLIAFDLHEESFR-VIEIPAKALARRSESELIVYSGRPAIADHLLLE 269 (376)
Q Consensus 193 ~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~ 269 (376)
.. ...++. -+|.+|...... ..|.++|+.+.+.. .++.+...........+...+|+|++.... .
T Consensus 83 ~~----~p~~i~~~~~g~lyv~~~~~------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~--~ 150 (328)
T 3dsm_A 83 FT----SPRYIHFLSDEKAYVTQIWD------YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS--Y 150 (328)
T ss_dssp CS----SEEEEEEEETTEEEEEEBSC------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT--T
T ss_pred CC----CCcEEEEeCCCeEEEEECCC------CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC--C
Confidence 11 112232 578888877433 28999999987764 566654110000122233468899988651 2
Q ss_pred CCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCC-------CcEEEEEeCCCCcE
Q 017140 270 DATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSD-------SVYVIHYDVVNRSM 342 (376)
Q Consensus 270 ~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~-------~~~l~~ydl~t~~~ 342 (376)
...+.++-++ ++.... .+..... . .. + .+..+|++++....... ...++.+|++++++
T Consensus 151 ~~~v~viD~~---t~~~~~-~i~~g~~----p-----~~-i-~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v 215 (328)
T 3dsm_A 151 QNRILKIDTE---TDKVVD-ELTIGIQ----P-----TS-L-VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV 215 (328)
T ss_dssp CCEEEEEETT---TTEEEE-EEECSSC----B-----CC-C-EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred CCEEEEEECC---CCeEEE-EEEcCCC----c-----cc-e-EEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE
Confidence 4556555443 232222 2222211 0 01 1 12257887776532100 26899999999987
Q ss_pred EE
Q 017140 343 RR 344 (376)
Q Consensus 343 ~~ 344 (376)
..
T Consensus 216 ~~ 217 (328)
T 3dsm_A 216 EK 217 (328)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 47
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=64.91 E-value=66 Score=27.48 Aligned_cols=116 Identities=11% Similarity=0.180 Sum_probs=67.1
Q ss_pred cce-EECceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEe
Q 017140 201 ESV-CVDGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVL 278 (376)
Q Consensus 201 ~~v-~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l 278 (376)
.|+ +.+|.+|--++.... ..|..+|+++.+- ..+++|.... ..-+...+++|+++.. ....+ |+.
T Consensus 24 qGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~~~f----geGi~~~~~~ly~ltw---~~~~v--~v~ 90 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPPPYF----GAGIVAWRDRLIQLTW---RNHEG--FVY 90 (243)
T ss_dssp EEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCTTCC----EEEEEEETTEEEEEES---SSSEE--EEE
T ss_pred ccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCCCcc----eeEEEEeCCEEEEEEe---eCCEE--EEE
Confidence 444 445667776665321 3899999988765 6678887543 2234556899999987 44444 444
Q ss_pred ccCCCCCeEEE-EEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcE-EEEEEe
Q 017140 279 DENDGDYWVQI-KVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSM-RRAEIF 348 (376)
Q Consensus 279 ~~~~~~~W~~~-~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~-~~v~~~ 348 (376)
+- +.-.++ .+..+.. + . .+..+|..+++.. ....+..+|++|.+. +.|.+.
T Consensus 91 D~---~tl~~~~ti~~~~~------G------w-glt~dg~~L~vSd---gs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 91 DL---ATLTPRARFRYPGE------G------W-ALTSDDSHLYMSD---GTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp ET---TTTEEEEEEECSSC------C------C-EEEECSSCEEEEC---SSSEEEEECTTTCCEEEEEECE
T ss_pred EC---CcCcEEEEEeCCCC------c------e-EEeeCCCEEEEEC---CCCeEEEEeCCCCeEEEEEEEc
Confidence 31 223333 2333311 1 1 1223455444442 356799999999775 555554
No 48
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=63.88 E-value=1e+02 Score=30.41 Aligned_cols=125 Identities=15% Similarity=0.193 Sum_probs=65.9
Q ss_pred CcceEECceEEEEEecCCCCCCccEEEEEEcCCcc--eEEE-ecChhhhccC----CccceEEeCCeEEEEEccCCCCCe
Q 017140 200 RESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEES--FRVI-EIPAKALARR----SESELIVYSGRPAIADHLLLEDAT 272 (376)
Q Consensus 200 ~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~--~~~i-~lP~~~~~~~----~~~~l~~~~G~L~l~~~~~~~~~~ 272 (376)
..++..+|.+|...... .|.++|.++.+ |+.- ..+....... ....+...+|+|++.+. ...
T Consensus 60 ~~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~----dg~ 128 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS-------RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL----DGR 128 (668)
T ss_dssp CCCEEETTEEEEEEGGG-------EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT----TSE
T ss_pred cCCEEECCEEEEECCCC-------eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC----CCE
Confidence 45688999999987643 89999987644 5432 2222111000 01223456788877643 233
Q ss_pred EEEEEec-cCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc--CCCcEEEEEeCCCCcEEEEE
Q 017140 273 MTIWVLD-ENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV--SDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 273 l~IW~l~-~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~--~~~~~l~~ydl~t~~~~~v~ 346 (376)
|..++ +.++..|......-+..+. ... .+ .+ .+|.|++..... .....++.||.+|++..+-.
T Consensus 129 --l~alD~~tG~~~W~~~~~~~~~~~~--~~~---~P---~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 129 --LIALDAKTGKAIWSQQTTDPAKPYS--ITG---AP---RV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp --EEEEETTTCCEEEEEECSCTTSSCB--CCS---CC---EE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred --EEEEECCCCCEeeeeccCCCCCcce--ecC---CC---EE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 45554 2344578764211011110 111 11 22 356565532110 12468999999999987754
No 49
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=63.84 E-value=59 Score=27.71 Aligned_cols=58 Identities=10% Similarity=-0.029 Sum_probs=37.2
Q ss_pred Cce-EEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCCeEEEEEccCCCCCeEEEEEe
Q 017140 206 DGF-VYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSGRPAIADHLLLEDATMTIWVL 278 (376)
Q Consensus 206 ~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G~L~l~~~~~~~~~~l~IW~l 278 (376)
+|. +||...... .|..+|.++. +..+..|... ...+. .-+|+|++... ....+.+|..
T Consensus 38 ~g~~l~~~~~~~~------~i~~~~~~~~-~~~~~~~~~~-----~~~l~~~~dg~l~v~~~---~~~~i~~~d~ 97 (296)
T 3e5z_A 38 ARSAVIFSDVRQN------RTWAWSDDGQ-LSPEMHPSHH-----QNGHCLNKQGHLIACSH---GLRRLERQRE 97 (296)
T ss_dssp GGTEEEEEEGGGT------EEEEEETTSC-EEEEESSCSS-----EEEEEECTTCCEEEEET---TTTEEEEECS
T ss_pred CCCEEEEEeCCCC------EEEEEECCCC-eEEEECCCCC-----cceeeECCCCcEEEEec---CCCeEEEEcC
Confidence 565 999887653 8999999988 7777655432 11222 24788877665 4456666654
No 50
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=62.01 E-value=80 Score=27.48 Aligned_cols=193 Identities=6% Similarity=0.022 Sum_probs=90.7
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCcc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYY 197 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 197 (376)
.++.+|+.|++.. .+ ...... ....++.+++. +. ++..... .....+.+|+..++.++.+.......
T Consensus 19 ~v~~~d~~tg~~~------~~--~~~~~~-~~p~~~a~spd-g~--l~~~~~~-~~~~~v~~~~~~~g~~~~~~~~~~~~ 85 (347)
T 3hfq_A 19 YQGTLDTTAKTLT------ND--GLLAAT-QNPTYLALSAK-DC--LYSVDKE-DDEGGIAAWQIDGQTAHKLNTVVAPG 85 (347)
T ss_dssp EEEEEETTTTEEE------EE--EEEEEC-SCCCCEEECTT-CE--EEEEEEE-TTEEEEEEEEEETTEEEEEEEEEEES
T ss_pred EEEEEcCCCCeEE------Ee--eeeecc-CCcceEEEccC-Ce--EEEEEec-CCCceEEEEEecCCcEEEeeeeecCC
Confidence 4677888888876 43 110000 00144666663 33 3332211 01347889999888876654321111
Q ss_pred --CCCcceEECce-EEEEEecCCCCCCccEEEEEEcC-CcceEEE---ecChh-h--hccCCccc-e-EEeCCeEEEEEc
Q 017140 198 --PQRESVCVDGF-VYFRSWVSTHKNGRTVLIAFDLH-EESFRVI---EIPAK-A--LARRSESE-L-IVYSGRPAIADH 265 (376)
Q Consensus 198 --~~~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~-~~~~~~i---~lP~~-~--~~~~~~~~-l-~~~~G~L~l~~~ 265 (376)
+..-++.-+|. +|.....+ ..|..+|+. +.....+ ..... . ........ + ..-+|+|++...
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred CCCEEEEECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 11112233566 55444332 278888884 3344333 21110 0 00000111 2 233678666555
Q ss_pred cCCCCCeEEEEEeccCCCCCeEEEE-EEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCC--CCc
Q 017140 266 LLLEDATMTIWVLDENDGDYWVQIK-VFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVV--NRS 341 (376)
Q Consensus 266 ~~~~~~~l~IW~l~~~~~~~W~~~~-~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~--t~~ 341 (376)
....+.+|.++.. +...... ...+.. .+ . ..+.. .+|+.+++... ....+..||++ +++
T Consensus 160 ---~~~~v~~~~~~~~--g~~~~~~~~~~~~g-----~~----p-~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 160 ---GSDKVYVYNVSDA--GQLSEQSVLTMEAG-----FG----P-RHLVFSPDGQYAFLAGE--LSSQIASLKYDTQTGA 222 (347)
T ss_dssp ---TTTEEEEEEECTT--SCEEEEEEEECCTT-----CC----E-EEEEECTTSSEEEEEET--TTTEEEEEEEETTTTE
T ss_pred ---CCCEEEEEEECCC--CcEEEeeeEEcCCC-----CC----C-ceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCc
Confidence 5678999999732 3344432 233221 01 1 11222 67875555422 34455555554 577
Q ss_pred EEEEE
Q 017140 342 MRRAE 346 (376)
Q Consensus 342 ~~~v~ 346 (376)
++.+.
T Consensus 223 ~~~~~ 227 (347)
T 3hfq_A 223 FTQLG 227 (347)
T ss_dssp EEEEE
T ss_pred eEEee
Confidence 76554
No 51
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=60.98 E-value=99 Score=28.19 Aligned_cols=185 Identities=9% Similarity=0.000 Sum_probs=92.8
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCcc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYY 197 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 197 (376)
.++++|..|++.. .+ ..... ....+.+.|. +.+.++....+ ....+.+++..++..+.+......
T Consensus 204 ~i~~~d~~tg~~~------~l--~~~~~---~~~~~~~spd-g~~la~~~~~~--g~~~i~~~d~~~~~~~~l~~~~~~- 268 (415)
T 2hqs_A 204 ALVIQTLANGAVR------QV--ASFPR---HNGAPAFSPD-GSKLAFALSKT--GSLNLYVMDLASGQIRQVTDGRSN- 268 (415)
T ss_dssp EEEEEETTTCCEE------EE--ECCSS---CEEEEEECTT-SSEEEEEECTT--SSCEEEEEETTTCCEEECCCCSSC-
T ss_pred EEEEEECCCCcEE------Ee--ecCCC---cccCEEEcCC-CCEEEEEEecC--CCceEEEEECCCCCEEeCcCCCCc-
Confidence 7899999999888 66 32211 1245666663 34433232221 245688889888876655432211
Q ss_pred CCCcceEE--Cce-EEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCCe-EEEEEccCCCCCe
Q 017140 198 PQRESVCV--DGF-VYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSGR-PAIADHLLLEDAT 272 (376)
Q Consensus 198 ~~~~~v~~--~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G~-L~l~~~~~~~~~~ 272 (376)
...+.+ +|. +++....+. . ..|..+|+.+.....+...... ...+. .-+|+ |++... +.....
T Consensus 269 --~~~~~~spdg~~l~~~s~~~g-~---~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~spdG~~l~~~~~-~~g~~~ 336 (415)
T 2hqs_A 269 --NTEPTWFPDSQNLAFTSDQAG-R---PQVYKVNINGGAPQRITWEGSQ-----NQDADVSSDGKFMVMVSS-NGGQQH 336 (415)
T ss_dssp --EEEEEECTTSSEEEEEECTTS-S---CEEEEEETTSSCCEECCCSSSE-----EEEEEECTTSSEEEEEEE-CSSCEE
T ss_pred --ccceEECCCCCEEEEEECCCC-C---cEEEEEECCCCCEEEEecCCCc-----ccCeEECCCCCEEEEEEC-cCCceE
Confidence 111222 565 444443221 1 3788899988765544322111 11111 23554 444433 112345
Q ss_pred EEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcEEEEE
Q 017140 273 MTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 273 l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
+.+|.++ .+... .+... . . . ..+.. .+|..++..........++.+|++++..+.+.
T Consensus 337 i~~~d~~---~~~~~----~l~~~----~-~----~-~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 337 IAKQDLA---TGGVQ----VLSST----F-L----D-ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEEETT---TCCEE----ECCCS----S-S----C-EEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred EEEEECC---CCCEE----EecCC----C-C----c-CCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 6666554 22222 22211 0 0 0 11222 57775555432222347999999998887764
No 52
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=60.98 E-value=97 Score=28.10 Aligned_cols=129 Identities=9% Similarity=0.002 Sum_probs=68.4
Q ss_pred eeEE-EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCc
Q 017140 108 NGII-LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNS 186 (376)
Q Consensus 108 ~Gll-~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~ 186 (376)
.+.| +.... .+...++-+++.. .+. +... ...++.+|+..+.. ..... ....+..++...+.
T Consensus 87 ~~~l~~~~~~-~I~~i~~~~~~~~------~~~-~~~~----~~~gl~~d~~~~~l--y~~D~---~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 87 EPVLLFANRI-DIRQVLPHRSEYT------LLL-NNLE----NAIALDFHHRRELV--FWSDV---TLDRILRANLNGSN 149 (386)
T ss_dssp CCEEEEECBS-CEEEECTTSCCCE------EEE-CSCS----CEEEEEEETTTTEE--EEEET---TTTEEEEEETTSCC
T ss_pred cceeEeecCc-cceeeccCCCcEE------EEe-cCCC----ccEEEEEecCCCeE--EEEeC---CCCcEEEEecCCCC
Confidence 4555 55444 6777888776655 331 2211 12788888765533 22222 13466777766665
Q ss_pred eEECcCCCCccCCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE--eCCeEE
Q 017140 187 WRPLKGGPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV--YSGRPA 261 (376)
Q Consensus 187 W~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~--~~G~L~ 261 (376)
.+.+.... .....++.+ +|.|||..... ..|.++|++...-..+- ..... ...-+.. .+|.|+
T Consensus 150 ~~~~~~~~--~~~p~glavd~~~g~lY~~d~~~------~~I~~~~~dg~~~~~l~-~~~l~---~P~giavdp~~g~ly 217 (386)
T 3v65_B 150 VEEVVSTG--LESPGGLAVDWVHDKLYWTDSGT------SRIEVANLDGAHRKVLL-WQSLE---KPRAIALHPMEGTIY 217 (386)
T ss_dssp EEEEECSS--CSCCCCEEEETTTTEEEEEETTT------TEEEECBTTSCSCEEEE-CSSCS---CEEEEEEETTTTEEE
T ss_pred cEEEEeCC--CCCccEEEEEeCCCeEEEEcCCC------CeEEEEeCCCCceEEee-cCCCC---CCcEEEEEcCCCeEE
Confidence 54432211 112233444 68999987654 28999998865544332 11111 1112222 468888
Q ss_pred EEEc
Q 017140 262 IADH 265 (376)
Q Consensus 262 l~~~ 265 (376)
+...
T Consensus 218 ~td~ 221 (386)
T 3v65_B 218 WTDW 221 (386)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 8866
No 53
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=59.86 E-value=86 Score=27.11 Aligned_cols=114 Identities=10% Similarity=0.169 Sum_probs=65.8
Q ss_pred eEECceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccC
Q 017140 203 VCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDEN 281 (376)
Q Consensus 203 v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~ 281 (376)
.+.+|.+|--++.... ..|..+|+++.+- ..+++|.... ..-+...+++|+++.. ....+-++-.+.
T Consensus 49 ~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~~~F----geGit~~g~~ly~ltw---~~~~v~v~D~~t- 116 (262)
T 3nol_A 49 FYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGKRYF----GEGISDWKDKIVGLTW---KNGLGFVWNIRN- 116 (262)
T ss_dssp EEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCTTCC----EEEEEEETTEEEEEES---SSSEEEEEETTT-
T ss_pred EEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCCccc----eeEEEEeCCEEEEEEe---eCCEEEEEECcc-
Confidence 3447778877765421 3799999998765 6678876432 2224556889999987 445443443322
Q ss_pred CCCCeEEE-EEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcE-EEEEEe
Q 017140 282 DGDYWVQI-KVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSM-RRAEIF 348 (376)
Q Consensus 282 ~~~~W~~~-~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~-~~v~~~ 348 (376)
-.++ .+..+.. .. .+..+|+.+++.. ....+..+|++|.+. +.|.+.
T Consensus 117 ----~~~~~ti~~~~e----G~---------glt~dg~~L~~Sd---Gs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 117 ----LRQVRSFNYDGE----GW---------GLTHNDQYLIMSD---GTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp ----CCEEEEEECSSC----CC---------CEEECSSCEEECC---SSSEEEEECTTTCSEEEEEECE
T ss_pred ----CcEEEEEECCCC----ce---------EEecCCCEEEEEC---CCCeEEEEcCCCCeEEEEEEec
Confidence 2233 2333321 11 1223556555542 256799999998664 555553
No 54
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=59.57 E-value=84 Score=26.92 Aligned_cols=148 Identities=11% Similarity=0.016 Sum_probs=71.8
Q ss_pred CCcEEEEEeCCC--ceEECcCCCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCcc
Q 017140 174 DPEYRIFELGTN--SWRPLKGGPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSES 251 (376)
Q Consensus 174 ~~~~~vyss~~~--~W~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~ 251 (376)
...+.+++.++| .|+.-..... ......+.-+|.++. ... ..|.+||.+.+.-..+..|..... ..
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~-~~~~~~~~pdG~ilv-s~~-------~~V~~~d~~G~~~W~~~~~~~~~~---~~ 81 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGW-ECNSVAATKAGEILF-SYS-------KGAKMITRDGRELWNIAAPAGCEM---QT 81 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTC-CCCEEEECTTSCEEE-ECB-------SEEEEECTTSCEEEEEECCTTCEE---EE
T ss_pred CCEEEEEECCCCeEEEEeCCCccC-CCcCeEECCCCCEEE-eCC-------CCEEEECCCCCEEEEEcCCCCccc---cc
Confidence 557788888777 6876432210 011112333787776 322 279999995544445665532110 11
Q ss_pred ceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcE
Q 017140 252 ELIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVY 331 (376)
Q Consensus 252 ~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~ 331 (376)
.-..-+|.+.++.. .. .-.|+.++..++..|.... ......+.... .. +.+ ..+|++++.. ..+..
T Consensus 82 ~~~~~dG~~lv~~~---~~-~~~v~~vd~~Gk~l~~~~~---~~~~~~~~~~~--~~-v~~-~~~G~~lv~~---~~~~~ 147 (276)
T 3no2_A 82 ARILPDGNALVAWC---GH-PSTILEVNMKGEVLSKTEF---ETGIERPHAQF--RQ-INK-NKKGNYLVPL---FATSE 147 (276)
T ss_dssp EEECTTSCEEEEEE---ST-TEEEEEECTTSCEEEEEEE---CCSCSSGGGSC--SC-CEE-CTTSCEEEEE---TTTTE
T ss_pred cEECCCCCEEEEec---CC-CCEEEEEeCCCCEEEEEec---cCCCCcccccc--cC-ceE-CCCCCEEEEe---cCCCE
Confidence 11224677776655 21 2356666544333455321 11100000000 01 111 2577777653 24667
Q ss_pred EEEEeCCCCcEEEEEE
Q 017140 332 VIHYDVVNRSMRRAEI 347 (376)
Q Consensus 332 l~~ydl~t~~~~~v~~ 347 (376)
++.||++.+.+.++..
T Consensus 148 v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 148 VREIAPNGQLLNSVKL 163 (276)
T ss_dssp EEEECTTSCEEEEEEC
T ss_pred EEEECCCCCEEEEEEC
Confidence 8888888544444443
No 55
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=59.48 E-value=1e+02 Score=29.75 Aligned_cols=125 Identities=10% Similarity=0.095 Sum_probs=65.5
Q ss_pred CcceEECceEEEEEecCCCCCCccEEEEEEc-CCcc--eEEEecChh--hhc--c--CCccceEEeCCeEEEEEccCCCC
Q 017140 200 RESVCVDGFVYFRSWVSTHKNGRTVLIAFDL-HEES--FRVIEIPAK--ALA--R--RSESELIVYSGRPAIADHLLLED 270 (376)
Q Consensus 200 ~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~-~~~~--~~~i~lP~~--~~~--~--~~~~~l~~~~G~L~l~~~~~~~~ 270 (376)
..++..+|.+|...... ..|.++|. ++.+ |+. +++.. ... + .....+...+|+|++... .
T Consensus 56 ~~P~v~~g~vyv~~~~~------~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~----d 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP------NNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA----N 124 (571)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT----T
T ss_pred cccEEECCEEEEEeCCC------CEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC----C
Confidence 45688999999986522 26999998 6544 443 33321 110 0 001224556888877744 2
Q ss_pred CeEEEEEecc-CCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc--CCCcEEEEEeCCCCcEEEEE
Q 017140 271 ATMTIWVLDE-NDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV--SDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 271 ~~l~IW~l~~-~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~--~~~~~l~~ydl~t~~~~~v~ 346 (376)
. .+..++- .++..|....-..+..+. ... .+ .+ .+|.|++..... .....++.||.+|++..+-.
T Consensus 125 g--~l~alD~~tG~~~W~~~~~~~~~~~~--~~~---~P---~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 125 G--HLLALDAKTGKINWEVEVCDPKVGST--LTQ---AP---FV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp S--EEEEEETTTCCEEEEEECCCGGGTCB--CCS---CC---EE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred C--EEEEEECCCCCEEEEecCCCCCccce--ecc---CC---EE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 2 3555652 344478764211010100 111 11 22 356665543110 01568999999999977653
No 56
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=58.25 E-value=1.1e+02 Score=27.94 Aligned_cols=112 Identities=11% Similarity=0.095 Sum_probs=58.5
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCC
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGDY 285 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~ 285 (376)
+|.+||..... ..|..+|+++.....+...... . .+.+..-++.|++... .... .||.++..+ .
T Consensus 141 ~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~~---~-~ia~~~~g~~l~~~d~---~~~~-~I~~~d~~~--~ 204 (409)
T 3hrp_A 141 NNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFKG---G-KPAVTKDKQRVYSIGW---EGTH-TVYVYMKAS--G 204 (409)
T ss_dssp TTEEEEEETTT------TEEEEEETTTTEEEEEEETCCB---C-BCEECTTSSEEEEEBS---STTC-EEEEEEGGG--T
T ss_pred CCCEEEEecCC------CcEEEEECCCCEEEEeeccCCC---C-ceeEecCCCcEEEEec---CCCc-eEEEEEcCC--C
Confidence 68999987643 3899999998777666332111 1 2111222335555544 2221 567776432 2
Q ss_pred eEEEEE-EcCC-CcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcEEEE
Q 017140 286 WVQIKV-FLPE-DYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 286 W~~~~~-~lp~-~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v 345 (376)
|..... .++. ... . ..-..+. .+|.|++.. ....++.||+++++...+
T Consensus 205 ~~~~~~g~~~~~~~~----~----p~~iav~p~~g~lyv~d----~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSG----K----IGAVALDETEEWLYFVD----SNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TCEEEEEECCTTSCS----C----CCBCEECTTSSEEEEEC----TTCEEEEEETTTCCEEEE
T ss_pred ceeEEeeeccchhcC----C----cEEEEEeCCCCeEEEEE----CCCcEEEEECCCCCEEEE
Confidence 432211 2221 111 0 1011233 377777732 356899999998886655
No 57
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=57.69 E-value=81 Score=26.13 Aligned_cols=156 Identities=12% Similarity=0.098 Sum_probs=72.3
Q ss_pred EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEE
Q 017140 151 NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAF 228 (376)
Q Consensus 151 ~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~f 228 (376)
.++.+|+.. ..-|+. .. ....+.+|+.+++......... .....++.+ +|.+|+... . ..|..|
T Consensus 27 ~~i~~~~~g-~l~v~~-~~---~~~~i~~~~~~~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~-~------~~i~~~ 92 (270)
T 1rwi_B 27 SGVAVDSAG-NVYVTS-EG---MYGRVVKLATGSTGTTVLPFNG--LYQPQGLAVDGAGTVYVTDF-N------NRVVTL 92 (270)
T ss_dssp EEEEECTTC-CEEEEE-CS---SSCEEEEECC-----EECCCCS--CCSCCCEEECTTCCEEEEET-T------TEEEEE
T ss_pred cceEECCCC-CEEEEc-cC---CCCcEEEecCCCcccceEeeCC--cCCcceeEECCCCCEEEEcC-C------CEEEEE
Confidence 667777643 322212 11 1346677776665544332211 112234444 578777655 2 289999
Q ss_pred EcCCcceEEEecChhhhccCCccceEE-eCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCccccccccccc
Q 017140 229 DLHEESFRVIEIPAKALARRSESELIV-YSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDID 307 (376)
Q Consensus 229 D~~~~~~~~i~lP~~~~~~~~~~~l~~-~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~ 307 (376)
|..+.....+..+... ....+.. -+|.|++... ....+.+| + .+....... .... .. .
T Consensus 93 d~~~~~~~~~~~~~~~----~p~~i~~~~~g~l~v~~~---~~~~i~~~--~-~~~~~~~~~---~~~~-----~~---~ 151 (270)
T 1rwi_B 93 AAGSNNQTVLPFDGLN----YPEGLAVDTQGAVYVADR---GNNRVVKL--A-AGSKTQTVL---PFTG-----LN---D 151 (270)
T ss_dssp CTTCSCCEECCCCSCS----SEEEEEECTTCCEEEEEG---GGTEEEEE--C-TTCCSCEEC---CCCS-----CC---S
T ss_pred eCCCceEeeeecCCcC----CCcceEECCCCCEEEEEC---CCCEEEEE--E-CCCceeEee---cccc-----CC---C
Confidence 9988766555432211 1122232 3788888766 34455555 3 222222111 1111 00 0
Q ss_pred ceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEEE
Q 017140 308 YFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 308 ~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~ 344 (376)
..-..+..+|.+++... ....+..||++++....
T Consensus 152 p~~i~~~~~g~l~v~~~---~~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 152 PDGVAVDNSGNVYVTDT---DNNRVVKLEAESNNQVV 185 (270)
T ss_dssp CCCEEECTTCCEEEEEG---GGTEEEEECTTTCCEEE
T ss_pred ceeEEEeCCCCEEEEEC---CCCEEEEEecCCCceEe
Confidence 10112224677665431 34578888888776544
No 58
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=56.63 E-value=99 Score=26.82 Aligned_cols=52 Identities=21% Similarity=0.190 Sum_probs=34.8
Q ss_pred EEEEEEcCCcceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEec
Q 017140 224 VLIAFDLHEESFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLD 279 (376)
Q Consensus 224 ~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~ 279 (376)
.|..||.+.+....+..|..... .....+...+|.|++... ....+.+..++
T Consensus 261 ~v~~~d~~G~~~~~~~~~~g~~~-~~~~~~~~~~g~L~v~~~---~~~~i~~~~~~ 312 (322)
T 2fp8_A 261 KGIKFDEFGNILEVIPLPPPFAG-EHFEQIQEHDGLLYIGTL---FHGSVGILVYD 312 (322)
T ss_dssp EEEEECTTSCEEEEEECCTTTTT-SCCCEEEEETTEEEEECS---SCSEEEEEEC-
T ss_pred EEEEECCCCCEEEEEECCCCCcc-ccceEEEEeCCEEEEeec---CCCceEEEecc
Confidence 79999998887888888864321 112334456899998876 55666666655
No 59
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=56.62 E-value=1.2e+02 Score=28.99 Aligned_cols=184 Identities=13% Similarity=0.085 Sum_probs=89.8
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCcc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYY 197 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 197 (376)
...++|..|++.. .+ ..... ..+.++| ++.+.+....... ....+.+++..++.++.+.......
T Consensus 133 ~~~l~d~~~g~~~------~l--~~~~~-----~~~~~sp-DG~~la~~~~~~~-~~~~i~~~d~~~g~~~~l~~~~~~~ 197 (582)
T 3o4h_A 133 RVALYALDGGGLR------EL--ARLPG-----FGFVSDI-RGDLIAGLGFFGG-GRVSLFTSNLSSGGLRVFDSGEGSF 197 (582)
T ss_dssp CEEEEEEETTEEE------EE--EEESS-----CEEEEEE-ETTEEEEEEEEET-TEEEEEEEETTTCCCEEECCSSCEE
T ss_pred CceEEEccCCcEE------Ee--ecCCC-----ceEEECC-CCCEEEEEEEcCC-CCeEEEEEcCCCCCceEeecCCCcc
Confidence 4568999999887 66 32211 2333444 3444443322211 1245788888888887664332111
Q ss_pred CCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCC--ccc--eEEeCCeEEEEEccCCCCCeE
Q 017140 198 PQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRS--ESE--LIVYSGRPAIADHLLLEDATM 273 (376)
Q Consensus 198 ~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~--~~~--l~~~~G~L~l~~~~~~~~~~l 273 (376)
......-||+..+....+. ...|..+|+++.....+........... ... -..-+|.+++... ....+
T Consensus 198 -~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~---~~g~~ 269 (582)
T 3o4h_A 198 -SSASISPGMKVTAGLETAR----EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR---REGRS 269 (582)
T ss_dssp -EEEEECTTSCEEEEEECSS----CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE---ETTEE
T ss_pred -ccceECCCCCEEEEccCCC----eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEE---cCCcE
Confidence 1111122666444332221 1379999999887763222211110000 000 0233676666655 55688
Q ss_pred EEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEEEE
Q 017140 274 TIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 274 ~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v 345 (376)
.||.+ ++ .. ..+.. ... . +. . .+|.+++..........++.+|+++ +.+.+
T Consensus 270 ~l~~~---g~--~~----~~~~~----~v~----~-~~-~-sdg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 270 AVFID---GE--RV----EAPQG----NHG----R-VV-L-WRGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEET---TE--EE----CCCSS----EEE----E-EE-E-ETTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred EEEEE---CC--ee----ccCCC----ceE----E-EE-e-cCCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 99988 21 11 12211 111 1 11 2 2677766544333456788888765 44443
No 60
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=56.53 E-value=1.5e+02 Score=29.51 Aligned_cols=124 Identities=15% Similarity=0.139 Sum_probs=0.0
Q ss_pred CCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhc-------cCCccceEEeCCeEEEEEccCCCCC
Q 017140 199 QRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALA-------RRSESELIVYSGRPAIADHLLLEDA 271 (376)
Q Consensus 199 ~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~-------~~~~~~l~~~~G~L~l~~~~~~~~~ 271 (376)
...++..+|.+|...... .|.++|.++.+-..---+..... ......+...+|+|++... ..
T Consensus 63 ~~~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg- 131 (689)
T 1yiq_A 63 EATPIVVDGVMYTTGPFS-------VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DG- 131 (689)
T ss_dssp CCCCEEETTEEEEECGGG-------CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TS-
T ss_pred eecCEEECCEEEEEcCCC-------eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---CC-
Q ss_pred eEEEEEec-cCCCCCeEEEEE-EcCCCcccccccccccceeEEeecCCeEEEeecccC--CCcEEEEEeCCCCcEEE
Q 017140 272 TMTIWVLD-ENDGDYWVQIKV-FLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVS--DSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 272 ~l~IW~l~-~~~~~~W~~~~~-~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~--~~~~l~~ydl~t~~~~~ 344 (376)
.|..++ +.++..|..... .....+. .. ..++..+|.+++...... ....++.||.+|++..+
T Consensus 132 --~l~AlDa~TG~~~W~~~~~~~~~~~~~--------~~-~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 132 --RLEAIDAKTGQRAWSVDTRADHKRSYT--------IT-GAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp --EEEEEETTTCCEEEEEECCSCTTSCCB--------CC-SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred --EEEEEECCCCCEeeeecCcCCCCCCcc--------cc-CCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
No 61
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=55.33 E-value=1.1e+02 Score=26.97 Aligned_cols=178 Identities=12% Similarity=0.103 Sum_probs=88.4
Q ss_pred CCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCC
Q 017140 115 FGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGP 194 (376)
Q Consensus 115 ~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~ 194 (376)
+. .+.++|..+++... .+ +... ....+.+.+. +.+.++.... ...+.+++..++.-...-...
T Consensus 11 d~-~v~v~d~~~~~~~~-----~~--~~~~----~~~~~~~s~d-g~~l~~~~~~----d~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 11 SD-NISVIDVTSNKVTA-----TI--PVGS----NPMGAVISPD-GTKVYVANAH----SNDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp TT-EEEEEETTTTEEEE-----EE--ECSS----SEEEEEECTT-SSEEEEEEGG----GTEEEEEETTTTEEEEEEECS
T ss_pred CC-EEEEEECCCCeEEE-----Ee--ecCC----CcceEEECCC-CCEEEEECCC----CCeEEEEECCCCeEEEEEECC
Confidence 44 89999999988761 22 2211 1245666653 3333333222 347888998887543211111
Q ss_pred CccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEE-EecChhhhccCCccceE-EeCCe-EEEEEccCCC
Q 017140 195 NYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRV-IEIPAKALARRSESELI-VYSGR-PAIADHLLLE 269 (376)
Q Consensus 195 ~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~-~~~G~-L~l~~~~~~~ 269 (376)
. .-.++.+ +|...++....+ ..|..+|+.+.+... +...... ..+. .-+|+ |++... .
T Consensus 74 ~---~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~~~~------~~~~~s~dg~~l~~~~~---~ 136 (391)
T 1l0q_A 74 S---SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTGKSP------LGLALSPDGKKLYVTNN---G 136 (391)
T ss_dssp S---SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSSSE------EEEEECTTSSEEEEEET---T
T ss_pred C---CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCCCCc------ceEEECCCCCEEEEEeC---C
Confidence 0 1112222 455333333222 289999998766533 3332211 1122 22454 555554 5
Q ss_pred CCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEE-eecCCeEEEeecccCCCcEEEEEeCCCCcEEE
Q 017140 270 DATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDC-IGRNNELLLVPQTVSDSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 270 ~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~-~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~ 344 (376)
...+.+|.+.. +..... +..... . ..+ ...+|+.+++. ...+..+..||+++++...
T Consensus 137 ~~~v~~~d~~~---~~~~~~-~~~~~~-----------~-~~~~~~~dg~~l~~~--~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 137 DKTVSVINTVT---KAVINT-VSVGRS-----------P-KGIAVTPDGTKVYVA--NFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp TTEEEEEETTT---TEEEEE-EECCSS-----------E-EEEEECTTSSEEEEE--ETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCC---CcEEEE-EecCCC-----------c-ceEEECCCCCEEEEE--eCCCCEEEEEECCCCeEEE
Confidence 67899997752 222221 111110 1 111 22566655433 1356778999998887543
No 62
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=54.42 E-value=1e+02 Score=26.34 Aligned_cols=183 Identities=9% Similarity=0.027 Sum_probs=91.9
Q ss_pred eeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC--ceEECcCCC
Q 017140 117 LYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN--SWRPLKGGP 194 (376)
Q Consensus 117 ~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~--~W~~~~~~~ 194 (376)
..++++|+.|++..- .+ +..... ........+. +.+-+ .. ...+..|+. ++ .|+......
T Consensus 15 ~~v~~~d~~tG~~~w-----~~--~~~~~~--~~~~~~~~pd-G~ilv--s~-----~~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 15 NKIAIINKDTKEIVW-----EY--PLEKGW--ECNSVAATKA-GEILF--SY-----SKGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp SEEEEEETTTTEEEE-----EE--ECCTTC--CCCEEEECTT-SCEEE--EC-----BSEEEEECT-TSCEEEEEECCTT
T ss_pred CEEEEEECCCCeEEE-----Ee--CCCccC--CCcCeEECCC-CCEEE--eC-----CCCEEEECC-CCCEEEEEcCCCC
Confidence 388999998988761 33 322100 0123334442 33222 11 335777777 45 576543211
Q ss_pred CccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhc--cCCccceEEeCCeEEEEEccCCCCCe
Q 017140 195 NYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALA--RRSESELIVYSGRPAIADHLLLEDAT 272 (376)
Q Consensus 195 ~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~--~~~~~~l~~~~G~L~l~~~~~~~~~~ 272 (376)
.. .....+..+|.++....... ..|++||.+.+....+.+...... ..........+|.+.++.. ....
T Consensus 77 ~~-~~~~~~~~dG~~lv~~~~~~-----~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---~~~~ 147 (276)
T 3no2_A 77 CE-MQTARILPDGNALVAWCGHP-----STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---ATSE 147 (276)
T ss_dssp CE-EEEEEECTTSCEEEEEESTT-----EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET---TTTE
T ss_pred cc-ccccEECCCCCEEEEecCCC-----CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec---CCCE
Confidence 11 01123445777766654311 379999987665555554332110 0011112234677766655 4555
Q ss_pred EEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEEEE
Q 017140 273 MTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 273 l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v 345 (376)
+..|-.+ ++..|+... +.. ..+ . ....+|.+++... ...+++.+|++|+++.+-
T Consensus 148 v~~~d~~--G~~~w~~~~---~~~----~~~------~-~~~~~g~~~v~~~---~~~~v~~~d~~tG~~~w~ 201 (276)
T 3no2_A 148 VREIAPN--GQLLNSVKL---SGT----PFS------S-AFLDNGDCLVACG---DAHCFVQLNLESNRIVRR 201 (276)
T ss_dssp EEEECTT--SCEEEEEEC---SSC----CCE------E-EECTTSCEEEECB---TTSEEEEECTTTCCEEEE
T ss_pred EEEECCC--CCEEEEEEC---CCC----ccc------e-eEcCCCCEEEEeC---CCCeEEEEeCcCCcEEEE
Confidence 6555543 444676532 211 111 1 2225788777642 345799999997776443
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=52.46 E-value=1.2e+02 Score=26.39 Aligned_cols=138 Identities=14% Similarity=0.067 Sum_probs=66.7
Q ss_pred cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCC
Q 017140 114 DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGG 193 (376)
Q Consensus 114 ~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~ 193 (376)
.++ .+.|+|..++++..+- .+ +.. ...+..+.+.+ ++.+-+.+. . ...+.+|+..++.+......
T Consensus 28 ~d~-~v~i~~~~~~~~~~~~---~~--~~h---~~~v~~~~~~~-~~~~l~~~~-~----dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 28 NNH-EVHIYEKSGNKWVQVH---EL--KEH---NGQVTGVDWAP-DSNRIVTCG-T----DRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp SSS-EEEEEEEETTEEEEEE---EE--ECC---SSCEEEEEEET-TTTEEEEEE-T----TSCEEEEEEETTEEEEEEEC
T ss_pred CCC-EEEEEeCCCCcEEeee---ee--cCC---CCcccEEEEeC-CCCEEEEEc-C----CCeEEEEECCCCeeeeeEEe
Confidence 344 7899999888633000 33 221 12235666776 344434332 2 44799999988877543222
Q ss_pred CCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcc-eE---EEecChhhhccCCccceEE-eCCeEEEEEcc
Q 017140 194 PNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEES-FR---VIEIPAKALARRSESELIV-YSGRPAIADHL 266 (376)
Q Consensus 194 ~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~-~~---~i~lP~~~~~~~~~~~l~~-~~G~L~l~~~~ 266 (376)
......-..+.+ +|.....+..+. .|..+|+.+.. +. .+..+... ....+.- -+|.+.+...
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~~~~- 161 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRS----TVLSLDWHPNSVLLAAGS- 161 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCS----CEEEEEECTTSSEEEEEE-
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCC----CeeEEEEcCCCCEEEEEc-
Confidence 111111111222 354444444332 56666765543 22 22222111 1111221 2555555555
Q ss_pred CCCCCeEEEEEec
Q 017140 267 LLEDATMTIWVLD 279 (376)
Q Consensus 267 ~~~~~~l~IW~l~ 279 (376)
.+..+.+|.+.
T Consensus 162 --~dg~i~~~d~~ 172 (372)
T 1k8k_C 162 --CDFKCRIFSAY 172 (372)
T ss_dssp --TTSCEEEEECC
T ss_pred --CCCCEEEEEcc
Confidence 56789999865
No 64
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=52.09 E-value=1.1e+02 Score=26.16 Aligned_cols=116 Identities=8% Similarity=-0.012 Sum_probs=58.4
Q ss_pred Cce-EEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCC
Q 017140 206 DGF-VYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGD 284 (376)
Q Consensus 206 ~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~ 284 (376)
+|. +||...... .|..+|.+ .....+..|.... ......-+|+|++... ....+.+|.. . +
T Consensus 55 ~g~~l~~~d~~~~------~i~~~~~~-g~~~~~~~~~~~~----~gl~~d~dG~l~v~~~---~~~~v~~~~~--~--g 116 (305)
T 3dr2_A 55 AQRTLVWSDLVGR------RVLGWRED-GTVDVLLDATAFT----NGNAVDAQQRLVHCEH---GRRAITRSDA--D--G 116 (305)
T ss_dssp GGTEEEEEETTTT------EEEEEETT-SCEEEEEESCSCE----EEEEECTTSCEEEEET---TTTEEEEECT--T--S
T ss_pred CCCEEEEEECCCC------EEEEEeCC-CCEEEEeCCCCcc----ceeeECCCCCEEEEEC---CCCEEEEECC--C--C
Confidence 454 899875543 79999985 4556555443221 1112234788877765 3344444433 1 3
Q ss_pred CeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeec----c----------cCCCcEEEEEeCCCCcEEEEE
Q 017140 285 YWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQ----T----------VSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 285 ~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~----~----------~~~~~~l~~ydl~t~~~~~v~ 346 (376)
....+....... ... ...-..+..+|.+++.-. . ......|+.||+++++++.+.
T Consensus 117 ~~~~~~~~~~~~----~~~---~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 117 QAHLLVGRYAGK----RLN---SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CEEEEECEETTE----ECS---CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEEeccCCC----ccC---CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 333321111100 000 010112226888887310 0 001357999999988887764
No 65
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=50.40 E-value=1.3e+02 Score=26.48 Aligned_cols=134 Identities=8% Similarity=-0.011 Sum_probs=60.0
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCce-EECcCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSW-RPLKGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~~~~~~~ 196 (376)
.+.|+|..+++.. .. -...........+.+.+..+.+-+.+. ....+.+|+.++++= ..... +
T Consensus 193 ~v~iwd~~~~~~~------~~--~~~~~~~~~~~~~~~~p~~~~~l~sg~-----~dg~v~~wd~~~~~~~~~~~~---h 256 (344)
T 4gqb_B 193 RILLWDTRCPKPA------SQ--IGCSAPGYLPTSLAWHPQQSEVFVFGD-----ENGTVSLVDTKSTSCVLSSAV---H 256 (344)
T ss_dssp CEEEEETTSSSCE------EE--CC----CCCEEEEEECSSCTTEEEEEE-----TTSEEEEEESCC--CCEEEEC---C
T ss_pred cccccccccccee------ee--eecceeeccceeeeecCCCCcceEEec-----cCCcEEEEECCCCcEEEEEcC---C
Confidence 6777777776655 22 111111111245666665555544332 134688888776531 11111 1
Q ss_pred cCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEEe-CC-eEEEEEccCCCCCe
Q 017140 197 YPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIVY-SG-RPAIADHLLLEDAT 272 (376)
Q Consensus 197 ~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~-~G-~L~l~~~~~~~~~~ 272 (376)
...-.++.+ +|.-|.+....+ ..|-.+|+.+.+...+.. ... ....+.-. +| .|..... .+..
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D-----~~i~vwd~~~~~~~~~~~--H~~---~V~~v~~sp~~~~llas~s---~D~~ 323 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSED-----CSLAVLDSSLSELFRSQA--HRD---FVRDATWSPLNHSLLTTVG---WDHQ 323 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETT-----SCEEEECTTCCEEEEECC--CSS---CEEEEEECSSSTTEEEEEE---TTSC
T ss_pred CCCEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCcEEEEcC--CCC---CEEEEEEeCCCCeEEEEEc---CCCe
Confidence 001122333 343233333322 268888988776443321 111 11112211 34 4443444 5678
Q ss_pred EEEEEecc
Q 017140 273 MTIWVLDE 280 (376)
Q Consensus 273 l~IW~l~~ 280 (376)
+.+|.++.
T Consensus 324 v~~w~v~~ 331 (344)
T 4gqb_B 324 VVHHVVPT 331 (344)
T ss_dssp EEEEECCC
T ss_pred EEEEECCC
Confidence 99999864
No 66
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=49.94 E-value=1.3e+02 Score=26.12 Aligned_cols=114 Identities=6% Similarity=-0.051 Sum_probs=64.4
Q ss_pred cceE-ECceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEe
Q 017140 201 ESVC-VDGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVL 278 (376)
Q Consensus 201 ~~v~-~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l 278 (376)
.++. .+|.+|-.+.... .|..+|+++.+- ..+ +|.... .--+...+++|+++.. .... +|+.
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~F----geGit~~g~~Ly~ltw---~~~~--v~V~ 121 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNIF----AEGLASDGERLYQLTW---TEGL--LFTW 121 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTCC----EEEEEECSSCEEEEES---SSCE--EEEE
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCcc----eeEEEEeCCEEEEEEc---cCCE--EEEE
Confidence 3444 4566777666543 699999988665 556 776432 2224556889999977 4444 4555
Q ss_pred ccCCCCCeEEE-EEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcE-EEEEEec
Q 017140 279 DENDGDYWVQI-KVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSM-RRAEIFG 349 (376)
Q Consensus 279 ~~~~~~~W~~~-~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~-~~v~~~~ 349 (376)
+- ++-.++ .+..+.. ..+ +..+|+.+++.. ....+..+|++|.+. +.|.+..
T Consensus 122 D~---~Tl~~~~ti~~~~e----GwG---------Lt~Dg~~L~vSd---Gs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 122 SG---MPPQRERTTRYSGE----GWG---------LCYWNGKLVRSD---GGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp ET---TTTEEEEEEECSSC----CCC---------EEEETTEEEEEC---SSSEEEEECTTTCCEEEEEECEE
T ss_pred EC---CcCcEEEEEeCCCc----eeE---------EecCCCEEEEEC---CCCEEEEEcCCCCeEEEEEEeCC
Confidence 41 223333 2333211 111 123455555543 366899999999764 5555543
No 67
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=49.60 E-value=26 Score=26.03 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=29.4
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEe
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSW 168 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~ 168 (376)
.+++++|.|++|. |......-....+..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~----------p~~~~~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKWV----------PAGGSTGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEEE----------EGGGCCSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceE----------ECCCCCCceEEEEEEECCCCEEEEEEEE
Confidence 6899999999998 4332111112778889888899999854
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=48.93 E-value=1.3e+02 Score=25.88 Aligned_cols=117 Identities=13% Similarity=0.074 Sum_probs=58.4
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE-eCCeEEEEEccCCCCCeEEEEEeccCCCC
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV-YSGRPAIADHLLLEDATMTIWVLDENDGD 284 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~-~~G~L~l~~~~~~~~~~l~IW~l~~~~~~ 284 (376)
+|.+||..... ..|..+|+++.++..+..+... ....+.. -+|+|++..... ....-.|+.++.. .+
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~----~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~-~~ 122 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHKA----NPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATEN-GD 122 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSSS----SEEEEEECTTSCEEEEECTT-SSSCCEEEEECTT-SC
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCCC----CcceEEECCCCcEEEEeCCC-CCCCceEEEEeCC-CC
Confidence 68888876544 2799999998887765322111 1122232 367888876521 0111234444322 22
Q ss_pred CeEEEEEEcCCCcccccccccccceeE-Ee-ecCCeEEEeeccc---CCCcEEEEEeCCCCcEEEE
Q 017140 285 YWVQIKVFLPEDYGEEILEEDIDYFVD-CI-GRNNELLLVPQTV---SDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 285 ~W~~~~~~lp~~~~~~~~~~~~~~~~~-~~-~~~g~ill~~~~~---~~~~~l~~ydl~t~~~~~v 345 (376)
.-... ..-... + .. +. +. ..+|.+++..... .....++.+|+++++++.+
T Consensus 123 ~~~~~-~~~~~~------~---~~-~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 123 NLQDI-IEDLST------A---YC-IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCEEE-ECSSSS------C---CC-EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEEE-EccCcc------C---Cc-ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 22211 110111 0 01 22 22 2577777754210 0135789999988777665
No 69
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=48.57 E-value=1.5e+02 Score=26.52 Aligned_cols=111 Identities=10% Similarity=-0.000 Sum_probs=57.7
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE--EeCCeEEEEEccCCCCCeEEEEEeccCCC
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI--VYSGRPAIADHLLLEDATMTIWVLDENDG 283 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~--~~~G~L~l~~~~~~~~~~l~IW~l~~~~~ 283 (376)
+|.++.....+ ..|..+|+.+.+......+...........-+ .-+|.+++... ....+.+|.++.
T Consensus 133 ~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~---~d~~v~~~d~~~--- 200 (433)
T 3bws_A 133 NTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM---QANAVHVFDLKT--- 200 (433)
T ss_dssp SSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG---GGTEEEEEETTT---
T ss_pred CCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC---CCCEEEEEECCC---
Confidence 55665554433 26899999887765432222211111111112 23678777766 567899998863
Q ss_pred CCeEEEEEEcCCCcccccccccccceeEEee--cCCeEEEeecccCCCcEEEEEeCCCCcEE
Q 017140 284 DYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQTVSDSVYVIHYDVVNRSMR 343 (376)
Q Consensus 284 ~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~~~~~~~~l~~ydl~t~~~~ 343 (376)
+.-... +..... . +..+. .+|..+++.. ..+..+..||+++++..
T Consensus 201 ~~~~~~-~~~~~~-----------~-~~~~~~~~~~~~l~~~~--~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 201 LAYKAT-VDLTGK-----------W-SKILLYDPIRDLVYCSN--WISEDISVIDRKTKLEI 247 (433)
T ss_dssp CCEEEE-EECSSS-----------S-EEEEEEETTTTEEEEEE--TTTTEEEEEETTTTEEE
T ss_pred ceEEEE-EcCCCC-----------C-eeEEEEcCCCCEEEEEe--cCCCcEEEEECCCCcEE
Confidence 212211 111111 1 22222 5666555432 24668899999887653
No 70
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=48.40 E-value=1.1e+02 Score=27.04 Aligned_cols=135 Identities=5% Similarity=-0.077 Sum_probs=62.9
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCce-EECcCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSW-RPLKGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~~~~~~~ 196 (376)
.+.|+|..+++.. .. -........+..+.+.|..+.+-+.+. . ...+.+|+.+++.= +......
T Consensus 205 ~v~~wd~~~~~~~------~~--~~~~~~~~~v~~v~~sp~~~~~la~g~-~----d~~i~~wd~~~~~~~~~~~~~~-- 269 (357)
T 4g56_B 205 RILLWDTRKPKPA------TR--IDFCASDTIPTSVTWHPEKDDTFACGD-E----TGNVSLVNIKNPDSAQTSAVHS-- 269 (357)
T ss_dssp CEEECCTTSSSCB------CB--CCCTTCCSCEEEEEECTTSTTEEEEEE-S----SSCEEEEESSCGGGCEEECCCS--
T ss_pred ceEEEECCCCcee------ee--eeeccccccccchhhhhcccceEEEee-c----ccceeEEECCCCcEeEEEeccc--
Confidence 6777887776654 22 111111112255666665555543332 1 34688888776531 1111110
Q ss_pred cCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE--eCCeEEEEEccCCCCCe
Q 017140 197 YPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV--YSGRPAIADHLLLEDAT 272 (376)
Q Consensus 197 ~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~--~~G~L~l~~~~~~~~~~ 272 (376)
..-.++.+ +|.-+.+....+ ..|-.+|+.+.+..... .... ....+.- .+|.+.+... .+..
T Consensus 270 -~~v~~l~~sp~~~~~lasgs~D-----~~i~iwd~~~~~~~~~~--~H~~---~V~~vafsP~d~~~l~s~s---~Dg~ 335 (357)
T 4g56_B 270 -QNITGLAYSYHSSPFLASISED-----CTVAVLDADFSEVFRDL--SHRD---FVTGVAWSPLDHSKFTTVG---WDHK 335 (357)
T ss_dssp -SCEEEEEECSSSSCCEEEEETT-----SCEEEECTTSCEEEEEC--CCSS---CEEEEEECSSSTTEEEEEE---TTSC
T ss_pred -eeEEEEEEcCCCCCEEEEEeCC-----CEEEEEECCCCcEeEEC--CCCC---CEEEEEEeCCCCCEEEEEc---CCCe
Confidence 01112222 343333333322 26888888876543322 1110 1111221 3566655555 6788
Q ss_pred EEEEEeccC
Q 017140 273 MTIWVLDEN 281 (376)
Q Consensus 273 l~IW~l~~~ 281 (376)
+.||.+...
T Consensus 336 v~iW~~~~~ 344 (357)
T 4g56_B 336 VLHHHLPSE 344 (357)
T ss_dssp EEEEECC--
T ss_pred EEEEECCCC
Confidence 999998743
No 71
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=48.35 E-value=1.5e+02 Score=26.50 Aligned_cols=186 Identities=13% Similarity=0.100 Sum_probs=91.1
Q ss_pred CCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCC
Q 017140 115 FGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGP 194 (376)
Q Consensus 115 ~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~ 194 (376)
+. .+.++|+.+++... .+ +... .....+.+++.. .+.++.... ...+.+|+..++.....-...
T Consensus 190 d~-~v~~~d~~~~~~~~-----~~--~~~~---~~~~~~~~~~~~-~~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 190 AN-AVHVFDLKTLAYKA-----TV--DLTG---KWSKILLYDPIR-DLVYCSNWI----SEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp GT-EEEEEETTTCCEEE-----EE--ECSS---SSEEEEEEETTT-TEEEEEETT----TTEEEEEETTTTEEEEECCCC
T ss_pred CC-EEEEEECCCceEEE-----EE--cCCC---CCeeEEEEcCCC-CEEEEEecC----CCcEEEEECCCCcEEEEecCC
Confidence 44 89999998877651 33 3111 112566666643 333232211 347889998887543221111
Q ss_pred CccCCCcceEE--CceEEEEEecCCCCC--CccEEEEEEcCCcceEE-EecChhhhccCCccceEEeCC-eEEEEEccCC
Q 017140 195 NYYPQRESVCV--DGFVYFRSWVSTHKN--GRTVLIAFDLHEESFRV-IEIPAKALARRSESELIVYSG-RPAIADHLLL 268 (376)
Q Consensus 195 ~~~~~~~~v~~--~G~lyw~~~~~~~~~--~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~~G-~L~l~~~~~~ 268 (376)
. ...++.+ +|...+.+....... ....|..+|+.+.+... +..+.... ... ..-+| .|++...
T Consensus 254 ~---~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~----~~~-~~~~g~~l~~~~~--- 322 (433)
T 3bws_A 254 G---LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKR----HIV-SGNTENKIYVSDM--- 322 (433)
T ss_dssp S---EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEE----EEE-ECSSTTEEEEEET---
T ss_pred C---CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcc----eEE-ECCCCCEEEEEec---
Confidence 0 0112222 565444444211100 01378899998765433 22222111 111 12245 5666655
Q ss_pred CCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEe-e-cCCeEEEeecccCC------------CcEEEE
Q 017140 269 EDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCI-G-RNNELLLVPQTVSD------------SVYVIH 334 (376)
Q Consensus 269 ~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~-~-~~g~ill~~~~~~~------------~~~l~~ 334 (376)
....+.+|.++. ...+. .++.. .. +..+ . .+|..+++...... +..++.
T Consensus 323 ~~~~v~v~d~~~-----~~~~~-~~~~~----------~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~ 385 (433)
T 3bws_A 323 CCSKIEVYDLKE-----KKVQK-SIPVF----------DK-PNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYV 385 (433)
T ss_dssp TTTEEEEEETTT-----TEEEE-EEECS----------SS-EEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEE
T ss_pred CCCEEEEEECCC-----CcEEE-EecCC----------CC-CCeEEEcCCCCEEEEEecCCCccccccccccccceEEEE
Confidence 667899998862 12221 12211 01 1122 2 56765555432111 348999
Q ss_pred EeCCCCcEEE
Q 017140 335 YDVVNRSMRR 344 (376)
Q Consensus 335 ydl~t~~~~~ 344 (376)
||+++++...
T Consensus 386 ~d~~~~~~~~ 395 (433)
T 3bws_A 386 IDTTTDTVKE 395 (433)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCcEEE
Confidence 9999887644
No 72
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=46.92 E-value=2.5e+02 Score=28.53 Aligned_cols=158 Identities=12% Similarity=0.103 Sum_probs=80.2
Q ss_pred EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCccCCCcceEE---CceEEEEEecCCCCCCccEEEE
Q 017140 151 NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIA 227 (376)
Q Consensus 151 ~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~ 227 (376)
.++++|...+. |..... ....++++++....-+.+.... +....++.+ +|.|||...... ..|.+
T Consensus 474 ~GLAvD~~~~~--LY~tD~---~~~~I~v~~ldG~~~~~l~~~~--l~~P~gIaVDp~~g~LYwtD~g~~-----~~I~~ 541 (791)
T 3m0c_C 474 DGLAVDWIHSN--IYWTDS---VLGTVSVADTKGVKRKTLFREN--GSKPRAIVVDPVHGFMYWTDWGTP-----AKIKK 541 (791)
T ss_dssp CEEEEETTTTE--EEEEET---TTTEEEEEETTSSSEEEEEECT--TCCEEEEEEETTTTEEEEEECSSS-----CEEEE
T ss_pred ceeeeeecCCc--EEEEec---CCCeEEEEeCCCCeEEEEEeCC--CCCcceEEEecCCCCEEEecCCCC-----CeEEE
Confidence 57777765543 222221 1446777777655444432211 112235555 589999875432 27999
Q ss_pred EEcCCcceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCccccccccccc
Q 017140 228 FDLHEESFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDID 307 (376)
Q Consensus 228 fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~ 307 (376)
++++...-..+-- .... ....+.+-..+|+||++.. ... .|++.+-.+....+.+ ..... +. .
T Consensus 542 ~~~dG~~~~~lv~-~~l~-~P~GLavD~~~~~LYwaD~---~~~--~I~~~d~dG~~~~~v~--~~~~~-----l~---~ 604 (791)
T 3m0c_C 542 GGLNGVDIYSLVT-ENIQ-WPNGITLDLLSGRLYWVDS---KLH--SISSIDVNGGNRKTIL--EDEKR-----LA---H 604 (791)
T ss_dssp EETTSCCEEEEEC-SSCS-CEEEEEEETTTTEEEEEET---TTT--EEEEEETTSCSCEEEE--ECTTT-----TS---S
T ss_pred EecCCCceEEEEe-CCCC-CceEEEEecCCCeEEEEeC---CCC--cEEEEecCCCceEEEe--cCCCc-----cC---C
Confidence 9998755544421 1111 0012222224789999976 333 4666654333333332 21111 11 1
Q ss_pred ceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcE
Q 017140 308 YFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSM 342 (376)
Q Consensus 308 ~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~ 342 (376)
+ + .+. .++.|++.- .....|..+|..+++-
T Consensus 605 P-~-glav~~~~lYwtD---~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 605 P-F-SLAVFEDKVFWTD---IINEAIFSANRLTGSD 635 (791)
T ss_dssp E-E-EEEEETTEEEEEE---TTTTEEEEEETTTCCC
T ss_pred C-C-EEEEeCCEEEEEE---CCCCEEEEEeCCCCcc
Confidence 2 1 222 355566543 3567888899766653
No 73
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=46.83 E-value=1.2e+02 Score=24.97 Aligned_cols=184 Identities=11% Similarity=0.099 Sum_probs=89.8
Q ss_pred eeEE-Ee-cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC
Q 017140 108 NGII-LM-DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN 185 (376)
Q Consensus 108 ~Gll-~~-~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~ 185 (376)
+|-+ .. ... .++++|+.++... .+ +.... ....++.+|+.. . ++..... ...+.+|+.++.
T Consensus 77 ~g~l~v~~~~~-~i~~~d~~~~~~~------~~--~~~~~--~~p~~i~~~~~g-~--l~v~~~~---~~~i~~~~~~~~ 139 (270)
T 1rwi_B 77 AGTVYVTDFNN-RVVTLAAGSNNQT------VL--PFDGL--NYPEGLAVDTQG-A--VYVADRG---NNRVVKLAAGSK 139 (270)
T ss_dssp TCCEEEEETTT-EEEEECTTCSCCE------EC--CCCSC--SSEEEEEECTTC-C--EEEEEGG---GTEEEEECTTCC
T ss_pred CCCEEEEcCCC-EEEEEeCCCceEe------ee--ecCCc--CCCcceEECCCC-C--EEEEECC---CCEEEEEECCCc
Confidence 4544 33 244 7899999887766 45 32211 112677777633 2 2222211 235666654444
Q ss_pred ceEECcCCCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE-eCCeEEE
Q 017140 186 SWRPLKGGPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV-YSGRPAI 262 (376)
Q Consensus 186 ~W~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~-~~G~L~l 262 (376)
........ ......++.+ +|.+|+..... ..|..||..+........... . ....+.. -+|.|++
T Consensus 140 ~~~~~~~~--~~~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~-~---~p~~i~~d~~g~l~v 207 (270)
T 1rwi_B 140 TQTVLPFT--GLNDPDGVAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFTDI-T---APWGIAVDEAGTVYV 207 (270)
T ss_dssp SCEECCCC--SCCSCCCEEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCSSC-C---SEEEEEECTTCCEEE
T ss_pred eeEeeccc--cCCCceeEEEeCCCCEEEEECCC------CEEEEEecCCCceEeecccCC-C---CceEEEECCCCCEEE
Confidence 33322111 1112234444 58877766543 289999998766544322111 1 1122232 3578888
Q ss_pred EEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEE-eecCCeEEEeecccCCCcEEEEEeCCCCc
Q 017140 263 ADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDC-IGRNNELLLVPQTVSDSVYVIHYDVVNRS 341 (376)
Q Consensus 263 ~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~-~~~~g~ill~~~~~~~~~~l~~ydl~t~~ 341 (376)
... ....+.+|..+ +..... .+.. .+. .. ..+ +..+|.+++... ....|..|++..++
T Consensus 208 ~~~---~~~~v~~~~~~--~~~~~~-----~~~~----~~~---~p-~~i~~~~~g~l~v~~~---~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 208 TEH---NTNQVVKLLAG--STTSTV-----LPFT----GLN---TP-LAVAVDSDRTVYVADR---GNDRVVKLTSLEHH 266 (270)
T ss_dssp EET---TTSCEEEECTT--CSCCEE-----CCCC----SCS---CE-EEEEECTTCCEEEEEG---GGTEEEEECCCGGG
T ss_pred EEC---CCCcEEEEcCC--CCccee-----eccC----CCC---Cc-eeEEECCCCCEEEEEC---CCCEEEEEcCCCcc
Confidence 876 44555555443 111111 1211 111 11 112 225777666532 45678888887665
No 74
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=46.50 E-value=1.5e+02 Score=25.86 Aligned_cols=182 Identities=9% Similarity=0.019 Sum_probs=91.6
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceE-ECcCCC--
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWR-PLKGGP-- 194 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~-~~~~~~-- 194 (376)
.+.|+|+.|++... .+ |..... .++.+++. + ++..... ....+.+++..+++-. .+....
T Consensus 65 ~v~viD~~t~~~~~-----~i--~~~~~p----~~i~~~~~-g--~lyv~~~---~~~~v~~iD~~t~~~~~~i~~g~~~ 127 (328)
T 3dsm_A 65 VIFAIDINTFKEVG-----RI--TGFTSP----RYIHFLSD-E--KAYVTQI---WDYRIFIINPKTYEITGYIECPDMD 127 (328)
T ss_dssp EEEEEETTTCCEEE-----EE--ECCSSE----EEEEEEET-T--EEEEEEB---SCSEEEEEETTTTEEEEEEECTTCC
T ss_pred EEEEEECcccEEEE-----Ec--CCCCCC----cEEEEeCC-C--eEEEEEC---CCCeEEEEECCCCeEEEEEEcCCcc
Confidence 79999999998851 45 432111 45555443 2 3444321 1457888998887532 222111
Q ss_pred Cc--cCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEEeCCeEEEEEccCCCCC
Q 017140 195 NY--YPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIVYSGRPAIADHLLLEDA 271 (376)
Q Consensus 195 ~~--~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~ 271 (376)
.. .+. .-+..+|.+|......+ ..|.++|+++.+. ..++...... .+ ...-+|+++++........
T Consensus 128 ~~~~~p~-~i~~~~~~lyv~~~~~~-----~~v~viD~~t~~~~~~i~~g~~p~----~i-~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 128 MESGSTE-QMVQYGKYVYVNCWSYQ-----NRILKIDTETDKVVDELTIGIQPT----SL-VMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTTCBCC-CEEEETTEEEEEECTTC-----CEEEEEETTTTEEEEEEECSSCBC----CC-EECTTSEEEEEBCCBCTTC
T ss_pred ccCCCcc-eEEEECCEEEEEcCCCC-----CEEEEEECCCCeEEEEEEcCCCcc----ce-EEcCCCCEEEEECCCccCC
Confidence 00 111 22335777877754211 3899999998765 3455433221 11 2234689888865211110
Q ss_pred -----eEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEE
Q 017140 272 -----TMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMR 343 (376)
Q Consensus 272 -----~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~ 343 (376)
.-.|++++. .+..-.+ .+.+|.. . .+.-..+..+|+.+++.. . .++.+|++++++.
T Consensus 197 ~~~~~~~~v~~id~-~t~~v~~-~~~~~~g--~-------~p~~la~~~d~~~lyv~~----~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 197 PYGYEAPSLYRIDA-ETFTVEK-QFKFKLG--D-------WPSEVQLNGTRDTLYWIN----N-DIWRMPVEADRVP 257 (328)
T ss_dssp SSCBCCCEEEEEET-TTTEEEE-EEECCTT--C-------CCEEEEECTTSCEEEEES----S-SEEEEETTCSSCC
T ss_pred ccccCCceEEEEEC-CCCeEEE-EEecCCC--C-------CceeEEEecCCCEEEEEc----c-EEEEEECCCCcee
Confidence 123444432 1222222 3344421 0 010112224566666542 2 7899999988863
No 75
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=45.24 E-value=2.2e+02 Score=27.51 Aligned_cols=126 Identities=13% Similarity=0.150 Sum_probs=66.4
Q ss_pred CcceEECceEEEEEecCCCCCCccEEEEEEcCCc--ceEEE-ecChhhhc-cC-CccceEEeCCeEEEEEccCCCCCeEE
Q 017140 200 RESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEE--SFRVI-EIPAKALA-RR-SESELIVYSGRPAIADHLLLEDATMT 274 (376)
Q Consensus 200 ~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~--~~~~i-~lP~~~~~-~~-~~~~l~~~~G~L~l~~~~~~~~~~l~ 274 (376)
..++..+|.+|...... .|.++|.++. .|+.- ..|..... +. ....+...+|+|++.+. . . .
T Consensus 62 ~~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---d-g--~ 128 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---D-A--S 128 (582)
T ss_dssp CCCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---T-T--E
T ss_pred eccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---C-C--E
Confidence 45688999999987543 6999999764 45542 22221110 00 01223456888887754 2 2 3
Q ss_pred EEEecc-CCCCCeEEEEEEcCC-CcccccccccccceeEEee--cCCe-EEEeeccc---CCCcEEEEEeCCCCcEEEEE
Q 017140 275 IWVLDE-NDGDYWVQIKVFLPE-DYGEEILEEDIDYFVDCIG--RNNE-LLLVPQTV---SDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 275 IW~l~~-~~~~~W~~~~~~lp~-~~~~~~~~~~~~~~~~~~~--~~g~-ill~~~~~---~~~~~l~~ydl~t~~~~~v~ 346 (376)
|..++- .++..|.... .-+. .+. ... . ..+.+ .+|+ ++++.... .....++.||++|++..+..
T Consensus 129 l~AlD~~TG~~~W~~~~-~~~~~~~~--~~~----s-P~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 129 VVALNKNTGKVVWKKKF-ADHGAGYT--MTG----A-PTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEEESSSCCEEEEEEC-SCGGGTCB--CCS----C-CEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCCEEeeecC-CCCCcCcc--ccc----C-CEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 555653 3444787641 1110 111 111 1 22232 2443 44443210 12568999999999988753
No 76
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=44.85 E-value=1.8e+02 Score=26.37 Aligned_cols=186 Identities=11% Similarity=0.078 Sum_probs=91.4
Q ss_pred eeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCc
Q 017140 117 LYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNY 196 (376)
Q Consensus 117 ~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~ 196 (376)
..+.++|..++... .| .... ..+..+.+.|. +.+.+...... ....+.+++..++..+.+......
T Consensus 159 ~~i~i~d~~g~~~~------~l--~~~~---~~v~~~~~Spd-g~~la~~s~~~--~~~~i~~~d~~tg~~~~l~~~~~~ 224 (415)
T 2hqs_A 159 YELRVSDYDGYNQF------VV--HRSP---QPLMSPAWSPD-GSKLAYVTFES--GRSALVIQTLANGAVRQVASFPRH 224 (415)
T ss_dssp EEEEEEETTSCSCE------EE--EEES---SCEEEEEECTT-SSEEEEEECTT--SSCEEEEEETTTCCEEEEECCSSC
T ss_pred ceEEEEcCCCCCCE------EE--eCCC---CcceeeEEcCC-CCEEEEEEecC--CCcEEEEEECCCCcEEEeecCCCc
Confidence 48999999876666 55 2211 11255566663 34333332211 246889999998876654332211
Q ss_pred cCCCcceEE--Cce-EEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCCe-EEEEEccCCCCC
Q 017140 197 YPQRESVCV--DGF-VYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSGR-PAIADHLLLEDA 271 (376)
Q Consensus 197 ~~~~~~v~~--~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G~-L~l~~~~~~~~~ 271 (376)
..++.+ +|. +++....+. . ..|..+|+.+.+...+...... ...+. .-+|+ |++... ...
T Consensus 225 ---~~~~~~spdg~~la~~~~~~g-~---~~i~~~d~~~~~~~~l~~~~~~-----~~~~~~spdg~~l~~~s~---~~g 289 (415)
T 2hqs_A 225 ---NGAPAFSPDGSKLAFALSKTG-S---LNLYVMDLASGQIRQVTDGRSN-----NTEPTWFPDSQNLAFTSD---QAG 289 (415)
T ss_dssp ---EEEEEECTTSSEEEEEECTTS-S---CEEEEEETTTCCEEECCCCSSC-----EEEEEECTTSSEEEEEEC---TTS
T ss_pred ---ccCEEEcCCCCEEEEEEecCC-C---ceEEEEECCCCCEEeCcCCCCc-----ccceEECCCCCEEEEEEC---CCC
Confidence 111222 565 554443321 1 3799999988776544221111 11111 22565 444433 234
Q ss_pred eEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcEEEE
Q 017140 272 TMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 272 ~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v 345 (376)
...||.++-.+.+ -. .+... + .....+.. .+|+.++..........++.+|+++++.+.+
T Consensus 290 ~~~i~~~d~~~~~-~~----~l~~~------~---~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 290 RPQVYKVNINGGA-PQ----RITWE------G---SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp SCEEEEEETTSSC-CE----ECCCS------S---SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred CcEEEEEECCCCC-EE----EEecC------C---CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 4566666532221 11 11111 0 01012222 5777555443212246899999999887654
No 77
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=44.14 E-value=1.4e+02 Score=24.95 Aligned_cols=185 Identities=12% Similarity=0.134 Sum_probs=93.1
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCC---CccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCce-EECcCC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVN---STYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSW-RPLKGG 193 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~---~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~~~~ 193 (376)
.+.++|+..+... .+ +... .......++.+++..+..-|..... ...+.+|+ .++.. +.+...
T Consensus 52 ~i~~~d~~g~~~~------~~--~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d-~~g~~~~~~~~~ 118 (286)
T 1q7f_A 52 RIQIFDKEGRFKF------QF--GECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYN-QYGQFVRKFGAT 118 (286)
T ss_dssp EEEEECTTSCEEE------EE--CCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEEC-TTSCEEEEECTT
T ss_pred EEEEECCCCcEEE------Ee--cccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEEC-CCCcEEEEecCc
Confidence 7889998866555 44 3221 1111125666654344332221111 33677777 33432 222221
Q ss_pred CCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCCeEEEEEccCCCC
Q 017140 194 PNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSGRPAIADHLLLED 270 (376)
Q Consensus 194 ~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G~L~l~~~~~~~~ 270 (376)
. .....++.+ +|.+|...... ..|..+|.+......+..+.... ....+. .-+|.|++... ..
T Consensus 119 ~--~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~---~~ 184 (286)
T 1q7f_A 119 I--LQHPRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHLE---FPNGVVVNDKQEIFISDN---RA 184 (286)
T ss_dssp T--CSCEEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTTCS---SEEEEEECSSSEEEEEEG---GG
T ss_pred c--CCCceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCccC---CcEEEEECCCCCEEEEEC---CC
Confidence 1 111123443 57777654433 38999998876666665432211 112222 33688888766 45
Q ss_pred CeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cCCeEEEeecccCCCc-EEEEEeCCCCcEEEEEE
Q 017140 271 ATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQTVSDSV-YVIHYDVVNRSMRRAEI 347 (376)
Q Consensus 271 ~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~~~~~~~-~l~~ydl~t~~~~~v~~ 347 (376)
..+.+|..+ +.... .+..+.. +. . +..+. .+|.+++... ... .+..||.+.+.++.+..
T Consensus 185 ~~i~~~~~~----g~~~~-~~~~~g~-----~~----~-p~~i~~d~~G~l~v~~~---~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 185 HCVKVFNYE----GQYLR-QIGGEGI-----TN----Y-PIGVGINSNGEILIADN---HNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp TEEEEEETT----CCEEE-EESCTTT-----SC----S-EEEEEECTTCCEEEEEC---SSSCEEEEECTTSCEEEEEEE
T ss_pred CEEEEEcCC----CCEEE-EEccCCc-----cC----C-CcEEEECCCCCEEEEeC---CCCEEEEEECCCCCEEEEEcc
Confidence 677777542 22222 1111111 11 1 22222 6788877642 333 89999998877777754
No 78
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=43.90 E-value=48 Score=24.94 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=28.7
Q ss_pred eEEEEcCCCC-ceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEe
Q 017140 118 YATLCNPSTR-QTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSW 168 (376)
Q Consensus 118 ~~~V~NP~T~-~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~ 168 (376)
.+++.||.|+ +|. |..... ..+.+..|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~----------p~g~~~--~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWV----------PTSKHA--VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEE----------ESCSSC--EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceE----------eCCCCc--eEEEEEEcCCCCEEEEEEcc
Confidence 7899999996 999 433221 22667788888899999854
No 79
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=43.77 E-value=2.6e+02 Score=27.87 Aligned_cols=184 Identities=9% Similarity=0.023 Sum_probs=91.0
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCC-c
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPN-Y 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~-~ 196 (376)
-++.+||.|+++. .+ +........+..+..|.. +. +.. .. ...+..|+..++.|+....... .
T Consensus 428 Gl~~~~~~~~~~~------~~--~~~~~~~~~v~~i~~d~~-g~--lwi-gt----~~Gl~~~~~~~~~~~~~~~~~~~~ 491 (781)
T 3v9f_A 428 NISYYNTRLKKFQ------II--ELEKNELLDVRVFYEDKN-KK--IWI-GT----HAGVFVIDLASKKVIHHYDTSNSQ 491 (781)
T ss_dssp EEEEECSSSCEEE------EC--CSTTTCCCCEEEEEECTT-SE--EEE-EE----TTEEEEEESSSSSCCEEECTTTSS
T ss_pred CEEEEcCCCCcEE------Ee--ccCCCCCCeEEEEEECCC-CC--EEE-EE----CCceEEEeCCCCeEEecccCcccc
Confidence 5777788887777 55 321111112244444432 11 111 11 2357788888888765533221 1
Q ss_pred cC--CCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE-eCCeEEEEEccCCCCC
Q 017140 197 YP--QRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV-YSGRPAIADHLLLEDA 271 (376)
Q Consensus 197 ~~--~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~-~~G~L~l~~~~~~~~~ 271 (376)
.. .-.++.. +|. .|++.... .|..||..+.++..+..+..... .....+.+ .+|.|.+.+. .
T Consensus 492 ~~~~~i~~i~~d~~g~-lWigt~~~------Gl~~~~~~~~~~~~~~~~~~l~~-~~i~~i~~d~~g~lWi~T~-----~ 558 (781)
T 3v9f_A 492 LLENFVRSIAQDSEGR-FWIGTFGG------GVGIYTPDMQLVRKFNQYEGFCS-NTINQIYRSSKGQMWLATG-----E 558 (781)
T ss_dssp CSCSCEEEEEECTTCC-EEEEESSS------CEEEECTTCCEEEEECTTTTCSC-SCEEEEEECTTSCEEEEET-----T
T ss_pred cccceeEEEEEcCCCC-EEEEEcCC------CEEEEeCCCCeEEEccCCCCCCC-CeeEEEEECCCCCEEEEEC-----C
Confidence 11 1122333 344 46655432 68999999999888764332211 11222333 4677777654 1
Q ss_pred eEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEe-ecCCeEEEeecccCCCcEEEEEeCCCCcEEEEE
Q 017140 272 TMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCI-GRNNELLLVPQTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 272 ~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~-~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
-+ |..++. ..+.+.... ... .+.. ..+..++ ..+|.|.+. ....+..||+++++++...
T Consensus 559 Gl-v~~~d~-~~~~~~~~~--~~~-----gl~~--~~i~~i~~d~~g~lW~~-----t~~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 559 GL-VCFPSA-RNFDYQVFQ--RKE-----GLPN--THIRAISEDKNGNIWAS-----TNTGISCYITSKKCFYTYD 618 (781)
T ss_dssp EE-EEESCT-TTCCCEEEC--GGG-----TCSC--CCCCEEEECSSSCEEEE-----CSSCEEEEETTTTEEEEEC
T ss_pred Cc-eEEECC-CCCcEEEcc--ccC-----CCCC--ceEEEEEECCCCCEEEE-----cCCceEEEECCCCceEEec
Confidence 12 133322 233344331 111 1111 1111122 268888885 3456999999999887764
No 80
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=43.55 E-value=2.5e+02 Score=27.67 Aligned_cols=126 Identities=17% Similarity=0.164 Sum_probs=65.2
Q ss_pred CcceEECceEEEEEecCCCCCCccEEEEEEcCCcc--eEEE-ecChhhhc--c--CCccceEEeCCeEEEEEccCCCCCe
Q 017140 200 RESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEES--FRVI-EIPAKALA--R--RSESELIVYSGRPAIADHLLLEDAT 272 (376)
Q Consensus 200 ~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~--~~~i-~lP~~~~~--~--~~~~~l~~~~G~L~l~~~~~~~~~~ 272 (376)
..++..+|.+|...... .|.++|.++.+ |+.- ..+..... . .....+...+|+|++.+. ...
T Consensus 71 ~~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~----dg~ 139 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS-------VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW----DGR 139 (677)
T ss_dssp CCCEEETTEEEEECGGG-------CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT----TSE
T ss_pred eCCEEECCEEEEECCCC-------eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC----CCE
Confidence 45688999999887643 79999997654 4432 22211110 0 011234556788877644 233
Q ss_pred EEEEEecc-CCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeeccc--CCCcEEEEEeCCCCcEEEEE
Q 017140 273 MTIWVLDE-NDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTV--SDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 273 l~IW~l~~-~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~--~~~~~l~~ydl~t~~~~~v~ 346 (376)
+..++- .++..|... +...... .... . ..++..+|.|++..... .....|+.||.+|++..+-.
T Consensus 140 --l~alD~~tG~~~W~~~---~~~~~~~-~~~~--~--~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 140 --LIALDAATGKEVWHQN---TFEGQKG-SLTI--T--GAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp --EEEEETTTCCEEEEEE---TTTTCCS-SCBC--C--SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred --EEEEECCCCCEEeeec---CCcCcCc-Cccc--c--cCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 444542 344478763 2201000 0000 0 01121356565532110 12578999999999987654
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=43.14 E-value=1.6e+02 Score=25.39 Aligned_cols=50 Identities=8% Similarity=0.161 Sum_probs=27.9
Q ss_pred EEEEEEcCCcceEEE-ecChhhhccCCccceE-EeCCeEEEEEccCCCCCeEEEEEec
Q 017140 224 VLIAFDLHEESFRVI-EIPAKALARRSESELI-VYSGRPAIADHLLLEDATMTIWVLD 279 (376)
Q Consensus 224 ~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~-~~~G~L~l~~~~~~~~~~l~IW~l~ 279 (376)
.|..+|+.+..+..+ .++.... ....+. .-+|.+.+... .+..+.+|.++
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~---~dg~i~vwd~~ 82 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNG---QVTGVDWAPDSNRIVTCG---TDRNAYVWTLK 82 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSS---CEEEEEEETTTTEEEEEE---TTSCEEEEEEE
T ss_pred EEEEEeCCCCcEEeeeeecCCCC---cccEEEEeCCCCEEEEEc---CCCeEEEEECC
Confidence 788899988765433 2221111 111122 22566555555 56789999986
No 82
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=41.41 E-value=2.7e+02 Score=27.37 Aligned_cols=167 Identities=13% Similarity=0.113 Sum_probs=85.0
Q ss_pred EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC--ceEECcCCCCccCCCcce-EECceEEEEEecCCCCCCccEEEE
Q 017140 151 NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN--SWRPLKGGPNYYPQRESV-CVDGFVYFRSWVSTHKNGRTVLIA 227 (376)
Q Consensus 151 ~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~--~W~~~~~~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~~~~il~ 227 (376)
....+.+ ++.|.++..... .....+++++..++ .|+.+...... ....+ ..++.+|++...+.. . ..|+.
T Consensus 237 ~~~~~Sp-Dg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~--~~~~~~~~g~~l~~~t~~~~~-~--~~l~~ 309 (693)
T 3iuj_A 237 VGATVTE-DDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDA--DVSLVDNKGSTLYLLTNRDAP-N--RRLVT 309 (693)
T ss_dssp EEEEECT-TSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSS--CEEEEEEETTEEEEEECTTCT-T--CEEEE
T ss_pred EEEEEcC-CCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCc--eEEEEeccCCEEEEEECCCCC-C--CEEEE
Confidence 3444444 455655543221 12357777787665 67765433211 11113 335678887765321 1 48999
Q ss_pred EEcCCc---ceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccc
Q 017140 228 FDLHEE---SFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEE 304 (376)
Q Consensus 228 fD~~~~---~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~ 304 (376)
.|+++. .|+.+- |.... ...+...++.|.+... ....-.|++++-. +.+.+ .+.+|.. +
T Consensus 310 ~d~~~~~~~~~~~l~-~~~~~----~~~~s~~g~~lv~~~~---~~g~~~l~~~d~~--g~~~~-~l~~p~~------~- 371 (693)
T 3iuj_A 310 VDAANPGPAHWRDLI-PERQQ----VLTVHSGSGYLFAEYM---VDATARVEQFDYE--GKRVR-EVALPGL------G- 371 (693)
T ss_dssp EETTSCCGGGCEEEE-CCCSS----CEEEEEETTEEEEEEE---ETTEEEEEEECTT--SCEEE-EECCSSS------S-
T ss_pred EeCCCCCccccEEEe-cCCCC----EEEEEEECCEEEEEEE---ECCeeEEEEEECC--CCeeE-EeecCCC------c-
Confidence 999763 466542 22211 1233344566766655 3333345554322 22333 2344532 1
Q ss_pred cccceeEEee--cCC-eEEEeecccCCCcEEEEEeCCCCcEEEEE
Q 017140 305 DIDYFVDCIG--RNN-ELLLVPQTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 305 ~~~~~~~~~~--~~g-~ill~~~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
. ...+. .++ .+++..........++.||+++++.+.+.
T Consensus 372 ---~-~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 372 ---S-VSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp ---E-EEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred ---e-EEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 1 21222 244 46665433345678999999999877664
No 83
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=40.73 E-value=1.6e+02 Score=24.53 Aligned_cols=192 Identities=6% Similarity=-0.038 Sum_probs=94.7
Q ss_pred eeeEE-Eec-CCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCC
Q 017140 107 VNGII-LMD-FGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGT 184 (376)
Q Consensus 107 ~~Gll-~~~-~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~ 184 (376)
.+|-+ +.. ....++++||. ++.. .+..|... ....++.+|+. +..-|. .. ....+..|+..
T Consensus 71 ~~g~l~v~~~~~~~v~~~d~~-g~~~------~~~~~~~~---~~~~~i~~~~~-g~l~v~--~~---~~~~i~~~~~~- 133 (300)
T 2qc5_A 71 SLGDIWFTENGANKIGKLSKK-GGFT------EYPLPQPD---SGPYGITEGLN-GDIWFT--QL---NGDRIGKLTAD- 133 (300)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCEE------EEECSSTT---CCEEEEEECST-TCEEEE--ET---TTTEEEEECTT-
T ss_pred CCCCEEEEecCCCeEEEECCC-CCeE------EecCCCCC---CCCccceECCC-CCEEEE--cc---CCCeEEEECCC-
Confidence 44545 332 22378899988 6666 44113211 11256666753 332221 11 12356666655
Q ss_pred CceEECcCCCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE-eCCeEE
Q 017140 185 NSWRPLKGGPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV-YSGRPA 261 (376)
Q Consensus 185 ~~W~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~-~~G~L~ 261 (376)
+......... ......++.+ +|.+|+..... ..|..+|. +.++..+.+|.... ....+.. -+|.|+
T Consensus 134 g~~~~~~~~~-~~~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~---~~~~i~~d~~g~l~ 202 (300)
T 2qc5_A 134 GTIYEYDLPN-KGSYPAFITLGSDNALWFTENQN------NSIGRITN-TGKLEEYPLPTNAA---APVGITSGNDGALW 202 (300)
T ss_dssp SCEEEEECSS-TTCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC---CEEEEEECTTSSEE
T ss_pred CCEEEccCCC-CCCCceeEEECCCCCEEEEecCC------CeEEEECC-CCcEEEeeCCCCCC---CcceEEECCCCCEE
Confidence 5444322111 1111223333 57876655433 27999999 66776676654322 1222332 368888
Q ss_pred EEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEE-eecCCeEEEeecccCCCcEEEEEeCCCC
Q 017140 262 IADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDC-IGRNNELLLVPQTVSDSVYVIHYDVVNR 340 (376)
Q Consensus 262 l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~-~~~~g~ill~~~~~~~~~~l~~ydl~t~ 340 (376)
+... ....+.+ ++. .+..... .+|... . .. ..+ +..+|.|++.. .....+..||+ ++
T Consensus 203 v~~~---~~~~i~~--~~~--~g~~~~~--~~~~~~-----~---~~-~~i~~d~~g~l~v~~---~~~~~i~~~~~-~g 260 (300)
T 2qc5_A 203 FVEI---MGNKIGR--ITT--TGEISEY--DIPTPN-----A---RP-HAITAGKNSEIWFTE---WGANQIGRITN-DN 260 (300)
T ss_dssp EEET---TTTEEEE--ECT--TCCEEEE--ECSSTT-----C---CE-EEEEECSTTCEEEEE---TTTTEEEEECT-TS
T ss_pred EEcc---CCCEEEE--EcC--CCcEEEE--ECCCCC-----C---Cc-eEEEECCCCCEEEec---cCCCeEEEECC-CC
Confidence 8876 3444444 432 2334332 344221 1 11 112 22578877753 23568999999 56
Q ss_pred cEEEEEEe
Q 017140 341 SMRRAEIF 348 (376)
Q Consensus 341 ~~~~v~~~ 348 (376)
+++.+.+.
T Consensus 261 ~~~~~~~~ 268 (300)
T 2qc5_A 261 TIQEYQLQ 268 (300)
T ss_dssp CEEEEECC
T ss_pred cEEEEECC
Confidence 66665443
No 84
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=40.40 E-value=1.9e+02 Score=25.41 Aligned_cols=184 Identities=13% Similarity=0.068 Sum_probs=84.5
Q ss_pred EecCCeeEEEEcCCCCceeeCCCceeecCCCC--CCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceE-
Q 017140 112 LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSV--NSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWR- 188 (376)
Q Consensus 112 ~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~--~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~- 188 (376)
-..++ .+.|||..+++.. .. ... ......+..+.+.+ ++.+-+.+. . ...+.+++..++.=.
T Consensus 99 ~s~dg-~v~lWd~~~~~~~------~~--~~~~~~~H~~~V~~v~~sp-dg~~l~sgs-~----d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 99 ASDSG-AVELWELDENETL------IV--SKFCKYEHDDIVSTVSVLS-SGTQAVSGS-K----DICIKVWDLAQQVVLS 163 (344)
T ss_dssp EETTS-EEEEEEECTTSSC------EE--EEEEEECCSSCEEEEEECT-TSSEEEEEE-T----TSCEEEEETTTTEEEE
T ss_pred EECCC-EEEEEeccCCCce------eE--eeccccCCCCCEEEEEECC-CCCEEEEEe-C----CCeEEEEECCCCcEEE
Confidence 34455 8999999988765 22 111 01112235566665 334433332 1 446888888776321
Q ss_pred ECcCCCCccCCCcceEE--Cce-EEEEEecCCCCCCccEEEEEEcCCcceE-EEecChhhhccCCccceEE--eCCeEEE
Q 017140 189 PLKGGPNYYPQRESVCV--DGF-VYFRSWVSTHKNGRTVLIAFDLHEESFR-VIEIPAKALARRSESELIV--YSGRPAI 262 (376)
Q Consensus 189 ~~~~~~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~~--~~G~L~l 262 (376)
.... +...-.++.+ +|. +...+..+ ..|..+|+.+.+-. .+..+.... ....+.- .++.+.+
T Consensus 164 ~~~~---h~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 164 SYRA---HAAQVTCVAASPHKDSVFLSCSED------NRILLWDTRCPKPASQIGCSAPGY---LPTSLAWHPQQSEVFV 231 (344)
T ss_dssp EECC---CSSCEEEEEECSSCTTEEEEEETT------SCEEEEETTSSSCEEECC----CC---CEEEEEECSSCTTEEE
T ss_pred EEcC---cCCceEEEEecCCCCCceeeeccc------cccccccccccceeeeeecceeec---cceeeeecCCCCcceE
Confidence 1111 1001111222 232 22223322 26888898776543 332222111 1111221 2455555
Q ss_pred EEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cCC-eEEEeecccCCCcEEEEEeCCC
Q 017140 263 ADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNN-ELLLVPQTVSDSVYVIHYDVVN 339 (376)
Q Consensus 263 ~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g-~ill~~~~~~~~~~l~~ydl~t 339 (376)
... .+..+.||-++.. ....+ ..... .. +..+. .+| .++... ..+..+..||.++
T Consensus 232 sg~---~dg~v~~wd~~~~-~~~~~---~~~h~-----------~~-v~~v~fsp~g~~~lasg---s~D~~i~vwd~~~ 289 (344)
T 4gqb_B 232 FGD---ENGTVSLVDTKST-SCVLS---SAVHS-----------QC-VTGLVFSPHSVPFLASL---SEDCSLAVLDSSL 289 (344)
T ss_dssp EEE---TTSEEEEEESCC---CCEE---EECCS-----------SC-EEEEEECSSSSCCEEEE---ETTSCEEEECTTC
T ss_pred Eec---cCCcEEEEECCCC-cEEEE---EcCCC-----------CC-EEEEEEccCCCeEEEEE---eCCCeEEEEECCC
Confidence 555 6688999977532 11111 11111 11 22222 344 455443 2566788888888
Q ss_pred CcEEE
Q 017140 340 RSMRR 344 (376)
Q Consensus 340 ~~~~~ 344 (376)
+++.+
T Consensus 290 ~~~~~ 294 (344)
T 4gqb_B 290 SELFR 294 (344)
T ss_dssp CEEEE
T ss_pred CcEEE
Confidence 87654
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=39.79 E-value=1.8e+02 Score=25.03 Aligned_cols=191 Identities=12% Similarity=0.123 Sum_probs=90.5
Q ss_pred ecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCC-CcEEEEEEeecCCCCCcEEEEEeCCCce-EEC
Q 017140 113 MDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVS-KKYKVLNSWAIPGRDPEYRIFELGTNSW-RPL 190 (376)
Q Consensus 113 ~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~-~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~ 190 (376)
..++ .+.|+|..++++. .+ -........+..+.+.+.. +.+-+++. . ...+.+|+..++.- ...
T Consensus 76 ~~dg-~v~iwd~~~~~~~------~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~----d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 76 SYDG-KVLIWKEENGRWS------QI--AVHAVHSASVNSVQWAPHEYGPLLLVAS-S----DGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp ETTS-CEEEEEEETTEEE------EE--EEECCCSSCEEEEEECCGGGCSEEEEEE-T----TSEEEEEECCTTSCCCEE
T ss_pred ccCC-EEEEEEcCCCcee------Ee--eeecCCCcceEEEEeCCCCCCCEEEEec-C----CCcEEEEecCCCCceeeE
Confidence 4455 8999999998754 22 1111111223566666653 34433332 2 44788888876621 111
Q ss_pred --cCCCCccCCCcceEE---------------CceEEEEEecCCCCCCccEEEEEEcCCcc--eEEE-ecChhhhccCCc
Q 017140 191 --KGGPNYYPQRESVCV---------------DGFVYFRSWVSTHKNGRTVLIAFDLHEES--FRVI-EIPAKALARRSE 250 (376)
Q Consensus 191 --~~~~~~~~~~~~v~~---------------~G~lyw~~~~~~~~~~~~~il~fD~~~~~--~~~i-~lP~~~~~~~~~ 250 (376)
..... .-.++.+ +|.....+..+. .|..+|+.+.. +..+ .+..... ..
T Consensus 142 ~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~h~~---~v 209 (379)
T 3jrp_A 142 IIDAHAI---GVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSD---WV 209 (379)
T ss_dssp EEECCTT---CEEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSS---CE
T ss_pred EecCCCC---ceEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEecccC---cE
Confidence 01000 0001111 355544444432 67788876443 3332 2222111 11
Q ss_pred cceEE-eC---CeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cCCeEEEeec
Q 017140 251 SELIV-YS---GRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQ 324 (376)
Q Consensus 251 ~~l~~-~~---G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~ 324 (376)
..+.- -+ |.+.+... .+..+.||.+... ...+.... +... ... .. +..+. .+|..++...
T Consensus 210 ~~~~~sp~~~~~~~l~s~~---~dg~i~iwd~~~~-~~~~~~~~--~~~~----~~~---~~-v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVS---QDRTCIIWTQDNE-QGPWKKTL--LKEE----KFP---DV-LWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEEEECCCCSSSEEEEEEE---TTSCEEEEEESST-TSCCEEEE--SSSS----CCS---SC-EEEEEECSSSCCEEEEE
T ss_pred eEEEECCCCCCCCeEEEEe---CCCEEEEEeCCCC-Cccceeee--eccc----cCC---Cc-EEEEEEcCCCCEEEEec
Confidence 11221 23 56666655 6678999999753 22343321 1110 011 12 22222 5777666542
Q ss_pred ccCCCcEEEEEeCC-CCcEEEEE
Q 017140 325 TVSDSVYVIHYDVV-NRSMRRAE 346 (376)
Q Consensus 325 ~~~~~~~l~~ydl~-t~~~~~v~ 346 (376)
.+..+..||+. .++++.+.
T Consensus 276 ---~dg~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 276 ---GDNKVTLWKENLEGKWEPAG 295 (379)
T ss_dssp ---SSSSEEEEEEEETTEEEEEE
T ss_pred ---CCCcEEEEeCCCCCcccccc
Confidence 46678888887 44555554
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=39.25 E-value=2e+02 Score=25.23 Aligned_cols=178 Identities=8% Similarity=0.076 Sum_probs=88.4
Q ss_pred cCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCC
Q 017140 114 DFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGG 193 (376)
Q Consensus 114 ~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~ 193 (376)
.+. .+.++|+.+++... .+ +... ....+.+.+. +.+-++... ....+.+|+..++.-...-..
T Consensus 52 ~d~-~i~v~d~~~~~~~~-----~~--~~~~----~v~~~~~spd-g~~l~~~~~----~~~~v~v~d~~~~~~~~~~~~ 114 (391)
T 1l0q_A 52 HSN-DVSIIDTATNNVIA-----TV--PAGS----SPQGVAVSPD-GKQVYVTNM----ASSTLSVIDTTSNTVAGTVKT 114 (391)
T ss_dssp GGT-EEEEEETTTTEEEE-----EE--ECSS----SEEEEEECTT-SSEEEEEET----TTTEEEEEETTTTEEEEEEEC
T ss_pred CCC-eEEEEECCCCeEEE-----EE--ECCC----CccceEECCC-CCEEEEEEC----CCCEEEEEECCCCeEEEEEeC
Confidence 345 89999999988771 22 2211 2256666663 334333321 145789999888754321111
Q ss_pred CCccCCCcceEE--Cce-EEEEEecCCCCCCccEEEEEEcCCcceEE-EecChhhhccCCccceEEeCC-eEEEEEccCC
Q 017140 194 PNYYPQRESVCV--DGF-VYFRSWVSTHKNGRTVLIAFDLHEESFRV-IEIPAKALARRSESELIVYSG-RPAIADHLLL 268 (376)
Q Consensus 194 ~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~~~~G-~L~l~~~~~~ 268 (376)
.. ...++.+ +|. +|.....+ ..|..+|+.+.+... +....... ... ..-+| .|++...
T Consensus 115 ~~---~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~----~~~-~~~dg~~l~~~~~--- 177 (391)
T 1l0q_A 115 GK---SPLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVGRSPK----GIA-VTPDGTKVYVANF--- 177 (391)
T ss_dssp SS---SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECCSSEE----EEE-ECTTSSEEEEEET---
T ss_pred CC---CcceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecCCCcc----eEE-ECCCCCEEEEEeC---
Confidence 10 1112222 465 44444333 389999998766533 33322111 111 12244 4445544
Q ss_pred CCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEe-e-cCCeEEEeecccCCCcEEEEEeCCCCcE
Q 017140 269 EDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCI-G-RNNELLLVPQTVSDSVYVIHYDVVNRSM 342 (376)
Q Consensus 269 ~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~-~-~~g~ill~~~~~~~~~~l~~ydl~t~~~ 342 (376)
....+.+|-+.. + ..+. .++.. .. ...+ . .+|+.+++......+..+..||+++++.
T Consensus 178 ~~~~v~~~d~~~---~--~~~~-~~~~~----------~~-~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 178 DSMSISVIDTVT---N--SVID-TVKVE----------AA-PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp TTTEEEEEETTT---T--EEEE-EEECS----------SE-EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred CCCEEEEEECCC---C--eEEE-EEecC----------CC-ccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 567888997753 2 2221 11111 01 1112 2 5666555542111356788889887764
No 87
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=38.92 E-value=2.2e+02 Score=25.68 Aligned_cols=141 Identities=14% Similarity=0.187 Sum_probs=68.6
Q ss_pred CCcEEEEEeCCCceEE-CcCCCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCcc
Q 017140 174 DPEYRIFELGTNSWRP-LKGGPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSES 251 (376)
Q Consensus 174 ~~~~~vyss~~~~W~~-~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~ 251 (376)
...+.+|+..++.-.. ... +.....++..+|.....+..+ ..|..+|+.+.+. ..+..+.... ...
T Consensus 298 d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~---~~v 365 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLTG---HQSLTSGMELKDNILVSGNAD------STVKIWDIKTGQCLQTLQGPNKHQ---SAV 365 (445)
T ss_dssp TSCEEEEETTTCCEEEEECC---CCSCEEEEEEETTEEEEEETT------SCEEEEETTTCCEEEEECSTTSCS---SCE
T ss_pred CCeEEEEECCCCCEEEEEcC---CcccEEEEEEeCCEEEEEeCC------CeEEEEECCCCcEEEEEccCCCCC---CCE
Confidence 3456777766653211 111 111122345566655444443 2789999976543 4444433221 123
Q ss_pred ceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cCCeEEEeecccC-C
Q 017140 252 ELIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQTVS-D 328 (376)
Q Consensus 252 ~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~~~~-~ 328 (376)
.-+..+|.+.+... .+..+.||.++. +............ ... .. +..+. .+|.++......+ .
T Consensus 366 ~~~~~~~~~l~s~~---~dg~v~iwd~~~---~~~~~~~~~~~~~----~~~---~~-v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 366 TCLQFNKNFVITSS---DDGTVKLWDLKT---GEFIRNLVTLESG----GSG---GV-VWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EEEEECSSEEEEEE---TTSEEEEEETTT---CCEEEEEEECTTG----GGT---CE-EEEEEECSSEEEEEEECSSSSS
T ss_pred EEEEECCCEEEEEe---CCCeEEEEECCC---CceeeeeeccccC----CCC---ce-EEEEEecCCEEEEEEcccCCCC
Confidence 33344666655555 678999998863 2233221111111 111 12 22222 5666666643211 2
Q ss_pred CcEEEEEeCCCC
Q 017140 329 SVYVIHYDVVNR 340 (376)
Q Consensus 329 ~~~l~~ydl~t~ 340 (376)
...+..+|++..
T Consensus 432 ~~~l~v~df~~~ 443 (445)
T 2ovr_B 432 ETKLLVLDFDVD 443 (445)
T ss_dssp CCEEEEEECCCC
T ss_pred ccEEEEEECCCC
Confidence 446888888754
No 88
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=38.47 E-value=1.6e+02 Score=24.07 Aligned_cols=186 Identities=15% Similarity=0.101 Sum_probs=91.2
Q ss_pred eeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCC-CceEECcCCCC
Q 017140 117 LYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGT-NSWRPLKGGPN 195 (376)
Q Consensus 117 ~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~-~~W~~~~~~~~ 195 (376)
..++++|+.+++.. .+ ..... .+..+.+.+. +.+-++.. ...+.+++..+ +....+.....
T Consensus 22 ~~i~~~d~~~~~~~------~~--~~~~~---~v~~~~~spd-g~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~ 83 (297)
T 2ojh_A 22 SSIEIFNIRTRKMR------VV--WQTPE---LFEAPNWSPD-GKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFA 83 (297)
T ss_dssp EEEEEEETTTTEEE------EE--EEESS---CCEEEEECTT-SSEEEEEE------TTEEEEEESSSCCSCEECCCTTC
T ss_pred eeEEEEeCCCCcee------ee--ccCCc---ceEeeEECCC-CCEEEEEc------CCeEEEEeCCCCCCceEeccccc
Confidence 37999999999888 66 32211 1255666663 34433321 33788999888 76665543221
Q ss_pred -ccCCCcceEECceEEEEEe-cCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEEeCCe-EEEEEccCCCCCe
Q 017140 196 -YYPQRESVCVDGFVYFRSW-VSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIVYSGR-PAIADHLLLEDAT 272 (376)
Q Consensus 196 -~~~~~~~v~~~G~lyw~~~-~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~G~-L~l~~~~~~~~~~ 272 (376)
.........-+|....... ..+.. ..|..+|..+.....+....... ... ..-+|+ |++... ....
T Consensus 84 ~~~~~~~~~spdg~~l~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~----~~~-~spdg~~l~~~~~---~~~~ 152 (297)
T 2ojh_A 84 TICNNDHGISPDGALYAISDKVEFGK---SAIYLLPSTGGTPRLMTKNLPSY----WHG-WSPDGKSFTYCGI---RDQV 152 (297)
T ss_dssp CCBCSCCEECTTSSEEEEEECTTTSS---CEEEEEETTCCCCEECCSSSSEE----EEE-ECTTSSEEEEEEE---ETTE
T ss_pred cccccceEECCCCCEEEEEEeCCCCc---ceEEEEECCCCceEEeecCCCcc----ceE-ECCCCCEEEEEEC---CCCc
Confidence 1111112222565333333 22111 48888998877655543322211 111 122454 444444 4567
Q ss_pred EEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcEEEE
Q 017140 273 MTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSMRRA 345 (376)
Q Consensus 273 l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v 345 (376)
+.||.++..+ +.... +...-. ....+.. .+|+.++..........++.+++.+++.+.+
T Consensus 153 ~~l~~~~~~~-~~~~~----~~~~~~---------~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 153 FDIYSMDIDS-GVETR----LTHGEG---------RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEEEEETTT-CCEEE----CCCSSS---------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred eEEEEEECCC-CcceE----cccCCC---------ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 8999986432 22211 111100 1011222 4666444332112355677777777766554
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=38.00 E-value=2e+02 Score=24.97 Aligned_cols=197 Identities=10% Similarity=0.074 Sum_probs=92.4
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCC--CceEECcCCCC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGT--NSWRPLKGGPN 195 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~--~~W~~~~~~~~ 195 (376)
.++.+|+.|++.. .+ ... .......+.+++. +.+-++.. ........+.+|.... +..+.+.....
T Consensus 30 ~~~~~d~~~g~~~------~~--~~~--~~~~p~~l~~spd-g~~l~~~~-~~~~~~~~v~~~~~~~~~g~~~~~~~~~~ 97 (361)
T 3scy_A 30 YTFRFNEETGESL------PL--SDA--EVANPSYLIPSAD-GKFVYSVN-EFSKDQAAVSAFAFDKEKGTLHLLNTQKT 97 (361)
T ss_dssp EEEEEETTTCCEE------EE--EEE--ECSCCCSEEECTT-SSEEEEEE-CCSSTTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred EEEEEeCCCCCEE------Ee--ecc--cCCCCceEEECCC-CCEEEEEE-ccCCCCCcEEEEEEeCCCCcEEEeeEecc
Confidence 4566788888887 55 221 0011134555553 33333332 2111235677777654 66655433221
Q ss_pred ccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCc-ce----EEEecCh----hhhccCCccc-eE-EeCCe-EEEE
Q 017140 196 YYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEE-SF----RVIEIPA----KALARRSESE-LI-VYSGR-PAIA 263 (376)
Q Consensus 196 ~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~-~~----~~i~lP~----~~~~~~~~~~-l~-~~~G~-L~l~ 263 (376)
.......+.++|...+.....+ ..|..+|+.+. .. ..+.... .......... +. .-+|+ |++.
T Consensus 98 ~~~~p~~~~~dg~~l~~~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 98 MGADPCYLTTNGKNIVTANYSG-----GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp SSSCEEEEEECSSEEEEEETTT-----TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEECCCEEEEEECCC-----CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 1111122333776444444332 27888888642 22 1111111 0000000111 22 23565 6665
Q ss_pred EccCCCCCeEEEEEeccCCCC---C-eEEE----EEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEE
Q 017140 264 DHLLLEDATMTIWVLDENDGD---Y-WVQI----KVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIH 334 (376)
Q Consensus 264 ~~~~~~~~~l~IW~l~~~~~~---~-W~~~----~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ 334 (376)
.. ....+.+|.++..... . .... ...++.. .+ . ..+.. .+|+.+++.. .....+..
T Consensus 173 ~~---~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~----~-~~~~~spdg~~l~v~~--~~~~~v~v 237 (361)
T 3scy_A 173 DL---GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG-----SG----P-RHLIFNSDGKFAYLIN--EIGGTVIA 237 (361)
T ss_dssp ET---TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT-----CC----E-EEEEECTTSSEEEEEE--TTTCEEEE
T ss_pred eC---CCCEEEEEEEcCCCCcccccceeecccccceecCCC-----CC----C-eEEEEcCCCCEEEEEc--CCCCeEEE
Confidence 54 6678999999753220 1 2221 1223321 01 1 11222 6787665542 24567899
Q ss_pred EeCCCCcEEEEE
Q 017140 335 YDVVNRSMRRAE 346 (376)
Q Consensus 335 ydl~t~~~~~v~ 346 (376)
||+++++++.+.
T Consensus 238 ~~~~~g~~~~~~ 249 (361)
T 3scy_A 238 FRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTEEEEEE
T ss_pred EEecCCceEEeE
Confidence 999888887664
No 90
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=37.66 E-value=1.9e+02 Score=24.71 Aligned_cols=64 Identities=9% Similarity=0.024 Sum_probs=34.7
Q ss_pred EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCC-CcEEEEEEeecCCCCCcEEEEEeCCC-ceEE
Q 017140 112 LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVS-KKYKVLNSWAIPGRDPEYRIFELGTN-SWRP 189 (376)
Q Consensus 112 ~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~-~~ykvv~~~~~~~~~~~~~vyss~~~-~W~~ 189 (376)
...+. .+.|+|..++++..+- .+ .... ..+..+.+.|.. +.+-+.+ .. ...+.+++..++ .|..
T Consensus 77 ~s~D~-~v~iWd~~~~~~~~~~---~~--~~h~---~~V~~v~~~p~~~g~~lasg-s~----D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 77 CSYDR-KVIIWREENGTWEKSH---EH--AGHD---SSVNSVCWAPHDYGLILACG-SS----DGAISLLTYTGEGQWEV 142 (316)
T ss_dssp EETTS-CEEEECCSSSCCCEEE---EE--CCCS---SCCCEEEECCTTTCSCEEEE-CS----SSCEEEEEECSSSCEEE
T ss_pred EECCC-EEEEEECCCCcceEEE---Ec--cCCC---CceEEEEECCCCCCcEEEEE-cC----CCCEEEEecCCCCCcce
Confidence 44566 8999999887654000 22 2111 123456666643 3333322 22 447888888876 6754
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=36.60 E-value=2.3e+02 Score=25.15 Aligned_cols=198 Identities=9% Similarity=0.051 Sum_probs=96.9
Q ss_pred ecCCeeEEEEcCCCCceee---CCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEE
Q 017140 113 MDFGLYATLCNPSTRQTFN---TPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRP 189 (376)
Q Consensus 113 ~~~~~~~~V~NP~T~~~~~---~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~ 189 (376)
..++ .+.|+|..+++... -|.. .+ .. ....+..+.+.+....+-+.+ .. ...+.+|+..++....
T Consensus 101 s~dg-~v~vw~~~~~~~~~~~~~~~~-~~--~~---h~~~v~~~~~~p~~~~~l~s~-~~----dg~i~iwd~~~~~~~~ 168 (402)
T 2aq5_A 101 SEDC-TVMVWEIPDGGLVLPLREPVI-TL--EG---HTKRVGIVAWHPTAQNVLLSA-GC----DNVILVWDVGTGAAVL 168 (402)
T ss_dssp ETTS-EEEEEECCTTCCSSCBCSCSE-EE--EC---CSSCEEEEEECSSBTTEEEEE-ET----TSCEEEEETTTTEEEE
T ss_pred eCCC-eEEEEEccCCCCccccCCceE-Ee--cC---CCCeEEEEEECcCCCCEEEEE-cC----CCEEEEEECCCCCccE
Confidence 4455 89999988875430 0000 22 11 112235666666543443333 22 4478999988875432
Q ss_pred CcCCCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEE-E-ecChhhhccCCccce-EEeCCeEEEEE
Q 017140 190 LKGGPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRV-I-EIPAKALARRSESEL-IVYSGRPAIAD 264 (376)
Q Consensus 190 ~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~-i-~lP~~~~~~~~~~~l-~~~~G~L~l~~ 264 (376)
.-....+...-.++.+ +|.....+..+ ..|..+|+.+.+... + ....... ...+ ..-+|.+.++.
T Consensus 169 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 169 TLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRPHEGTR----PVHAVFVSEGKILTTG 238 (402)
T ss_dssp EECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECSSCSSS----CCEEEECSTTEEEEEE
T ss_pred EEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccCCCCCc----ceEEEEcCCCcEEEEe
Confidence 2100000001112222 45544444443 289999998765432 3 2221110 1112 22367766665
Q ss_pred ccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCc--
Q 017140 265 HLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRS-- 341 (376)
Q Consensus 265 ~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~-- 341 (376)
........+.||.+...... - .. ..++.. .....+.. .+|..+++. ...+..+..||+++++
T Consensus 239 ~~~~~d~~i~iwd~~~~~~~-~-~~-~~~~~~----------~~v~~~~~s~~~~~l~~~--g~~dg~i~i~d~~~~~~~ 303 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLEEP-L-SL-QELDTS----------SGVLLPFFDPDTNIVYLC--GKGDSSIRYFEITSEAPF 303 (402)
T ss_dssp ECTTCCEEEEEEETTBCSSC-S-EE-EECCCC----------SSCEEEEEETTTTEEEEE--ETTCSCEEEEEECSSTTC
T ss_pred ccCCCCceEEEEcCccccCC-c-eE-EeccCC----------CceeEEEEcCCCCEEEEE--EcCCCeEEEEEecCCCcc
Confidence 32226788999998753221 1 11 122211 01011222 567666543 2246789999999888
Q ss_pred EEEEEE
Q 017140 342 MRRAEI 347 (376)
Q Consensus 342 ~~~v~~ 347 (376)
++.+..
T Consensus 304 ~~~l~~ 309 (402)
T 2aq5_A 304 LHYLSM 309 (402)
T ss_dssp EEEEEE
T ss_pred eEeecc
Confidence 666643
No 92
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=34.91 E-value=2.4e+02 Score=24.94 Aligned_cols=129 Identities=9% Similarity=0.002 Sum_probs=67.6
Q ss_pred eeEE-EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCc
Q 017140 108 NGII-LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNS 186 (376)
Q Consensus 108 ~Gll-~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~ 186 (376)
.+.| +.... .+...++-+.... .+. +... ...++.+|+..+.. ..... ....+..++.....
T Consensus 44 ~~~ll~~~~~-~I~~i~~~g~~~~------~~~-~~~~----~~~~l~~d~~~~~l--y~~D~---~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 44 EPVLLFANRI-DIRQVLPHRSEYT------LLL-NNLE----NAIALDFHHRRELV--FWSDV---TLDRILRANLNGSN 106 (349)
T ss_dssp CCEEEEECBS-CEEEECTTSCCEE------EEE-CSCS----CEEEEEEETTTTEE--EEEET---TTTEEEEEETTSCS
T ss_pred CceeEeeccc-ceEEEeCCCCeeE------Eee-cCCC----ceEEEEEeccccEE--EEEec---cCCceEEEecCCCC
Confidence 4555 55544 6777777766655 330 2221 12788888765533 22222 13456666666554
Q ss_pred eEECcCCCCccCCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE--eCCeEE
Q 017140 187 WRPLKGGPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV--YSGRPA 261 (376)
Q Consensus 187 W~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~--~~G~L~ 261 (376)
-+.+.... .....++.+ +|.+||..... ..|.++|++...-..+- ..... ...-+.. .+|.|+
T Consensus 107 ~~~~~~~~--~~~p~glavd~~~g~ly~~d~~~------~~I~~~~~dG~~~~~l~-~~~l~---~P~~iavdp~~g~ly 174 (349)
T 3v64_C 107 VEEVVSTG--LESPGGLAVDWVHDKLYWTDSGT------SRIEVANLDGAHRKVLL-WQSLE---KPRAIALHPMEGTIY 174 (349)
T ss_dssp CEEEECSS--CSCCCEEEEETTTTEEEEEETTT------TEEEEEETTSCSCEEEE-CTTCS---CEEEEEEETTTTEEE
T ss_pred ceEEEeCC--CCCccEEEEecCCCeEEEEcCCC------CeEEEEcCCCCceEEEE-eCCCC---CcceEEEecCcCeEE
Confidence 33321111 112234444 68999987654 38999999876544432 11111 1112222 368888
Q ss_pred EEEc
Q 017140 262 IADH 265 (376)
Q Consensus 262 l~~~ 265 (376)
+...
T Consensus 175 ~td~ 178 (349)
T 3v64_C 175 WTDW 178 (349)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 8876
No 93
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=34.81 E-value=2.1e+02 Score=24.15 Aligned_cols=180 Identities=11% Similarity=0.090 Sum_probs=89.5
Q ss_pred ecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcC
Q 017140 113 MDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKG 192 (376)
Q Consensus 113 ~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 192 (376)
..++ .+.++|..+++..... .+ ... ...+..+.+.+ ++.+-+++. . ...+.+|+..++.-...-.
T Consensus 116 ~~d~-~i~~~d~~~~~~~~~~---~~--~~~---~~~i~~~~~~~-~~~~l~~~~-~----dg~v~~~d~~~~~~~~~~~ 180 (337)
T 1gxr_A 116 GEAS-TLSIWDLAAPTPRIKA---EL--TSS---APACYALAISP-DSKVCFSCC-S----DGNIAVWDLHNQTLVRQFQ 180 (337)
T ss_dssp ESSS-EEEEEECCCC--EEEE---EE--ECS---SSCEEEEEECT-TSSEEEEEE-T----TSCEEEEETTTTEEEEEEC
T ss_pred cCCC-cEEEEECCCCCcceee---ec--ccC---CCceEEEEECC-CCCEEEEEe-C----CCcEEEEeCCCCceeeeee
Confidence 3455 8999999888743000 22 111 11235566665 334433332 1 3468889888774322111
Q ss_pred CCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceE-EEecChhhhccCCccceE-EeCCeEEEEEccCC
Q 017140 193 GPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFR-VIEIPAKALARRSESELI-VYSGRPAIADHLLL 268 (376)
Q Consensus 193 ~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~-~~~G~L~l~~~~~~ 268 (376)
.. ...-.++.+ +|.....+..+ ..|..+|+.+.+-. .+..+.... .+. .-+|...++..
T Consensus 181 ~~--~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~v~------~~~~s~~~~~l~~~~--- 243 (337)
T 1gxr_A 181 GH--TDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFTSQIF------SLGYCPTGEWLAVGM--- 243 (337)
T ss_dssp CC--SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSSCEE------EEEECTTSSEEEEEE---
T ss_pred cc--cCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCCCceE------EEEECCCCCEEEEEc---
Confidence 11 001112222 55555554443 28999999876543 333322211 111 22455555555
Q ss_pred CCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cCCeEEEeecccCCCcEEEEEeCCCCcEEE
Q 017140 269 EDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQTVSDSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 269 ~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~~~~~~~~l~~ydl~t~~~~~ 344 (376)
....+.+|.+.... .. .+... . .. +..+. .+|.+++.. ..+..+..||+++++...
T Consensus 244 ~~~~i~~~~~~~~~-----~~--~~~~~------~---~~-v~~~~~~~~~~~l~~~---~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 244 ESSNVEVLHVNKPD-----KY--QLHLH------E---SC-VLSLKFAYCGKWFVST---GKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp TTSCEEEEETTSSC-----EE--EECCC------S---SC-EEEEEECTTSSEEEEE---ETTSEEEEEETTTCCEEE
T ss_pred CCCcEEEEECCCCC-----eE--EEcCC------c---cc-eeEEEECCCCCEEEEe---cCCCcEEEEECCCCeEEE
Confidence 56778999886431 11 11111 0 11 22222 577766654 256789999999888653
No 94
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=34.70 E-value=2.1e+02 Score=24.31 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=53.6
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecC--CCCCcEEEEEeCCCceEE---CcC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIP--GRDPEYRIFELGTNSWRP---LKG 192 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~--~~~~~~~vyss~~~~W~~---~~~ 192 (376)
.++.+||.+++.. .+ . . . ....++.+++..+ .-.+. .... .....+.+|+...+.... ...
T Consensus 170 ~v~~~d~~~g~~~------~~--~-~-~--~~p~gl~~spdg~-~lyv~-~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~ 235 (305)
T 3dr2_A 170 SVYRLPPDGSPLQ------RM--A-D-L--DHPNGLAFSPDEQ-TLYVS-QTPEQGHGSVEITAFAWRDGALHDRRHFAS 235 (305)
T ss_dssp EEEEECSSSCCCE------EE--E-E-E--SSEEEEEECTTSS-EEEEE-ECCC---CCCEEEEEEEETTEEEEEEEEEC
T ss_pred eEEEEcCCCCcEE------EE--e-c-C--CCCcceEEcCCCC-EEEEE-ecCCcCCCCCEEEEEEecCCCccCCeEEEE
Confidence 5777888777776 55 2 1 0 1115666666432 22222 1110 012468888877654211 111
Q ss_pred CCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChh
Q 017140 193 GPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAK 243 (376)
Q Consensus 193 ~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~ 243 (376)
.... ...++.+ +|.+ |++.. ..|..||++.+....+.+|..
T Consensus 236 ~~~~--~pdgi~~d~~G~l-wv~~~-------~gv~~~~~~g~~~~~~~~~~~ 278 (305)
T 3dr2_A 236 VPDG--LPDGFCVDRGGWL-WSSSG-------TGVCVFDSDGQLLGHIPTPGT 278 (305)
T ss_dssp CSSS--CCCSEEECTTSCE-EECCS-------SEEEEECTTSCEEEEEECSSC
T ss_pred CCCC--CCCeEEECCCCCE-EEecC-------CcEEEECCCCCEEEEEECCCc
Confidence 1111 1233444 5774 55442 279999999888888888863
No 95
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=34.70 E-value=2.2e+02 Score=24.36 Aligned_cols=189 Identities=11% Similarity=0.057 Sum_probs=90.9
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCC---cc-ceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceE-ECcC
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNS---TY-FCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWR-PLKG 192 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~---~~-~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~-~~~~ 192 (376)
.+.++|+.|++... .+..+.... .. ....++.+++..+ +-++.... ....+.+++..++.=. .+..
T Consensus 112 ~v~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~---~~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 112 AVTAIDAKTGEVKG-----RLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIG---KESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp EEEEEETTTCCEEE-----EEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEES---SSCEEEEEETTTTEEEEEECC
T ss_pred EEEEEeCCCCeeEE-----EEecCCCccccccCCCCCceEEECCCCC-EEEEEecC---CCceEEEEcCCCCceEEEecC
Confidence 89999999988751 230011110 00 1125677777443 33333211 1446888888777322 1110
Q ss_pred CCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceE-EEecChhhhccCCccceE-EeCC-eEEEEEccCCC
Q 017140 193 GPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFR-VIEIPAKALARRSESELI-VYSG-RPAIADHLLLE 269 (376)
Q Consensus 193 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~~l~-~~~G-~L~l~~~~~~~ 269 (376)
.. .....-.+.-+|...+....+ ..|..+|+.+.+.. .++.+..... .....+. .-+| .|++... .
T Consensus 183 ~~-~~~~~~~~s~dg~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~---~ 251 (353)
T 3vgz_A 183 TG-KMSTGLALDSEGKRLYTTNAD------GELITIDTADNKILSRKKLLDDGKE-HFFINISLDTARQRAFITDS---K 251 (353)
T ss_dssp CC-TTCCCCEEETTTTEEEEECTT------SEEEEEETTTTEEEEEEECCCSSSC-CCEEEEEEETTTTEEEEEES---S
T ss_pred CC-CccceEEECCCCCEEEEEcCC------CeEEEEECCCCeEEEEEEcCCCCCC-cccceEEECCCCCEEEEEeC---C
Confidence 10 111122233366644444332 27889999877653 4454322110 0111122 2244 5666554 5
Q ss_pred CCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEEE
Q 017140 270 DATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 270 ~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~ 344 (376)
...+.+|-++. +.-.. .+.++.. .. + ....+|+.+++.. ..+..+..||+++++...
T Consensus 252 ~~~v~~~d~~~---~~~~~-~~~~~~~----------~~-~-~~s~dg~~l~v~~--~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 252 AAEVLVVDTRN---GNILA-KVAAPES----------LA-V-LFNPARNEAYVTH--RQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp SSEEEEEETTT---CCEEE-EEECSSC----------CC-E-EEETTTTEEEEEE--TTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCC---CcEEE-EEEcCCC----------ce-E-EECCCCCEEEEEE--CCCCeEEEEECCCCeEEE
Confidence 57787886642 22222 2233321 01 1 1225666444432 246789999999887643
No 96
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=33.86 E-value=49 Score=24.67 Aligned_cols=41 Identities=12% Similarity=0.260 Sum_probs=29.3
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCC-ccceeEEEeEeCCCCcEEEEEEe
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNS-TYFCVNSFGFDPVSKKYKVLNSW 168 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~-~~~~~~~l~~d~~~~~ykvv~~~ 168 (376)
.+++++|.|++|. |.... ..-....+..|...+.|+|+..+
T Consensus 12 ~V~~~d~~~~~W~----------p~~~g~~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRWL----------PAGTGPQAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSCC----------BSSCSCCCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCcee----------ECCCCCCCccEEEEEEeCCCCEEEEEEEE
Confidence 6789999999998 43321 11112678889888999999855
No 97
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=33.11 E-value=3.5e+02 Score=26.28 Aligned_cols=119 Identities=15% Similarity=0.152 Sum_probs=0.0
Q ss_pred CcceEECceEEEEEe-cCCCCCCccEEEEEEc--CCcceEEEecChhhhcc------CCccceEE--eCCe----EEEEE
Q 017140 200 RESVCVDGFVYFRSW-VSTHKNGRTVLIAFDL--HEESFRVIEIPAKALAR------RSESELIV--YSGR----PAIAD 264 (376)
Q Consensus 200 ~~~v~~~G~lyw~~~-~~~~~~~~~~il~fD~--~~~~~~~i~lP~~~~~~------~~~~~l~~--~~G~----L~l~~ 264 (376)
..++..+|.+|.... .. .|.++|. +.+.--..+.+...... ....-+.. .+|+ |++..
T Consensus 56 ~tP~v~~g~vyv~~~~~~-------~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN-------NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp SCCEEETTEEEEECSTTT-------CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred eccEEECCEEEEEeCCCC-------EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc
Q ss_pred ccCCCCCeEEEEEec-cCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCC------CcEEEEEeC
Q 017140 265 HLLLEDATMTIWVLD-ENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSD------SVYVIHYDV 337 (376)
Q Consensus 265 ~~~~~~~~l~IW~l~-~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~------~~~l~~ydl 337 (376)
. .. .+..++ +.++..|....-.....+. ... .+ .+. +|.|++ ... ...|+.||.
T Consensus 129 ~---dg---~l~AlDa~TG~~~W~~~~~~~~~~~~--~~s---sP---~v~-~g~V~v----g~~g~e~g~~g~v~A~D~ 189 (599)
T 1w6s_A 129 L---DG---NVAALNAETGETVWKVENSDIKVGST--LTI---AP---YVV-KDKVII----GSSGAELGVRGYLTAYDV 189 (599)
T ss_dssp T---TS---EEEEEETTTCCEEEEEECCCGGGTCB--CCS---CC---EEE-TTEEEE----CCBCGGGTCCCEEEEEET
T ss_pred C---CC---EEEEEECCCCCEEEeecCCCCCccce--eec---CC---EEE-CCEEEE----EecccccCCCCeEEEEEC
Q ss_pred CCCcEEE
Q 017140 338 VNRSMRR 344 (376)
Q Consensus 338 ~t~~~~~ 344 (376)
+|++..+
T Consensus 190 ~TG~~~W 196 (599)
T 1w6s_A 190 KTGEQVW 196 (599)
T ss_dssp TTCCEEE
T ss_pred CCCcEEE
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=31.87 E-value=1.5e+02 Score=25.83 Aligned_cols=139 Identities=9% Similarity=0.067 Sum_probs=60.8
Q ss_pred CCcEEEEEeCCCceEECcCCCCccCCCcceEE--CceEEEEEecCCCCCCccEEEEEEcCCcc-eEEE-ecChhhhccCC
Q 017140 174 DPEYRIFELGTNSWRPLKGGPNYYPQRESVCV--DGFVYFRSWVSTHKNGRTVLIAFDLHEES-FRVI-EIPAKALARRS 249 (376)
Q Consensus 174 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~il~fD~~~~~-~~~i-~lP~~~~~~~~ 249 (376)
...+.+|+..++.|+.......+...-.++.+ +|.....+..+ ..|..+|+.+.. +... .+..... .
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~~~~~~~---~ 102 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGTWKQTLVLLRLNR---A 102 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------CCCCEEECCCCSS---C
T ss_pred CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCceeeeeEecccCC---c
Confidence 45788999998888776544322211112222 34433333332 267888887765 3222 1111111 0
Q ss_pred ccceE-EeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEE-EEcCCCcccccccccccceeEEee--cCCeEEEeecc
Q 017140 250 ESELI-VYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIK-VFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQT 325 (376)
Q Consensus 250 ~~~l~-~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~-~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~~ 325 (376)
...+. .-+|.+.+... .+..+.+|.++.. +.|.... +..+.. .. +..+. .+|.+++..
T Consensus 103 v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~--~~~~~~~~~~~~h~----------~~-v~~~~~~~~~~~l~~~-- 164 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGS---GARVISVCYFEQE--NDWWVSKHLKRPLR----------ST-ILSLDWHPNNVLLAAG-- 164 (377)
T ss_dssp EEEEECCTTSSCCEEEE---SSSCEEECCC-------CCCCEEECSSCC----------SC-EEEEEECTTSSEEEEE--
T ss_pred eEEEEECCCCCEEEEEe---cCCeEEEEEECCc--ccceeeeEeecccC----------CC-eEEEEEcCCCCEEEEE--
Confidence 11111 11455545544 5678999988642 2343332 221111 11 22232 566666654
Q ss_pred cCCCcEEEEEeCCCC
Q 017140 326 VSDSVYVIHYDVVNR 340 (376)
Q Consensus 326 ~~~~~~l~~ydl~t~ 340 (376)
..+..+..||++++
T Consensus 165 -~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 165 -CADRKAYVLSAYVR 178 (377)
T ss_dssp -ESSSCEEEEEECCS
T ss_pred -eCCCEEEEEEEEec
Confidence 24567888887643
No 99
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=31.34 E-value=2.4e+02 Score=23.84 Aligned_cols=152 Identities=10% Similarity=0.144 Sum_probs=71.8
Q ss_pred CCcEEEEEeCC-CceEECc--CCCC-ccCCCcceEE--Cce-EEEEEecCCCCCCccEEEEEEcC--CcceEE---Ee-c
Q 017140 174 DPEYRIFELGT-NSWRPLK--GGPN-YYPQRESVCV--DGF-VYFRSWVSTHKNGRTVLIAFDLH--EESFRV---IE-I 240 (376)
Q Consensus 174 ~~~~~vyss~~-~~W~~~~--~~~~-~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~~il~fD~~--~~~~~~---i~-l 240 (376)
...+.+|+..+ +...... .... .......+.+ +|. +|...... ..|..+|+. +..+.. +. +
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~------~~i~~~~~~~~~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN------SSVDVWELKDPHGNIECVQTLDMM 223 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT------TEEEEEESSCTTSCCEEEEEEECS
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC------CEEEEEEecCCCCcEEEEeecccc
Confidence 34688899887 6664322 1000 0001112223 565 44444332 278888884 344432 22 3
Q ss_pred ChhhhccCCccceE-EeCC-eEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEeecCCe
Q 017140 241 PAKALARRSESELI-VYSG-RPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNE 318 (376)
Q Consensus 241 P~~~~~~~~~~~l~-~~~G-~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ 318 (376)
|...........+. .-+| .|++... ....+.+|.++.. .+.+..+. .++... .. .. + ....+|+
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~~~---~~~~i~v~d~~~~-~~~~~~~~-~~~~~~---~~----~~-~-~~s~dg~ 289 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYACDR---TASLITVFSVSED-GSVLSKEG-FQPTET---QP----RG-F-NVDHSGK 289 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEEET---TTTEEEEEEECTT-SCCEEEEE-EEECSS---SC----CC-E-EECTTSS
T ss_pred CccccccCCccceEECCCCCEEEEEec---CCCEEEEEEEcCC-CCceEEee-eecCCC---cc----ce-E-EECCCCC
Confidence 43311000111122 2245 4554443 5678999999743 23455542 222110 00 11 1 1225777
Q ss_pred EEEeecccCCCcEEEEE--eCCCCcEEEEEE
Q 017140 319 LLLVPQTVSDSVYVIHY--DVVNRSMRRAEI 347 (376)
Q Consensus 319 ill~~~~~~~~~~l~~y--dl~t~~~~~v~~ 347 (376)
.+++... .+..+..| |+++++++.+..
T Consensus 290 ~l~~~~~--~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 290 YLIAAGQ--KSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp EEEEECT--TTCEEEEEEEETTTTEEEEEEE
T ss_pred EEEEecC--CCCeEEEEEEcCCCceeeEccc
Confidence 6665432 33455555 888988887753
No 100
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=31.02 E-value=2.3e+02 Score=23.47 Aligned_cols=108 Identities=11% Similarity=0.126 Sum_probs=58.9
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE-eCCeEEEEEccCCCCCeEEEEEeccCCCC
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV-YSGRPAIADHLLLEDATMTIWVLDENDGD 284 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~-~~G~L~l~~~~~~~~~~l~IW~l~~~~~~ 284 (376)
+|.+|...... ..|..+|.. ..+..+.+|.... ....+.. -+|.|++... ....+..|..+ +
T Consensus 25 ~g~l~v~~~~~------~~v~~~d~~-~~~~~~~~~~~~~---~~~~i~~~~~g~l~v~~~---~~~~i~~~~~~----g 87 (299)
T 2z2n_A 25 KGKVWITQHKA------NMISCINLD-GKITEYPLPTPDA---KVMCLTISSDGEVWFTEN---AANKIGRITKK----G 87 (299)
T ss_dssp TSCEEEEETTT------TEEEEECTT-CCEEEEECSSTTC---CEEEEEECTTSCEEEEET---TTTEEEEECTT----S
T ss_pred CCCEEEEecCC------CcEEEEcCC-CCeEEecCCcccC---ceeeEEECCCCCEEEeCC---CCCeEEEECCC----C
Confidence 57766654322 289999999 7888877663321 1222332 4688888765 34444444322 2
Q ss_pred CeEEEEEEcCCCcccccccccccceeEEee--cCCeEEEeecccCCCcEEEEEeCCCCcEEEEE
Q 017140 285 YWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 285 ~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
.... +.+|.... . +..+. .+|.+++... ....++.||+ +++...+.
T Consensus 88 ~~~~--~~~~~~~~---------~-~~~i~~~~~g~l~v~~~---~~~~i~~~d~-~g~~~~~~ 135 (299)
T 2z2n_A 88 IIKE--YTLPNPDS---------A-PYGITEGPNGDIWFTEM---NGNRIGRITD-DGKIREYE 135 (299)
T ss_dssp CEEE--EECSSTTC---------C-EEEEEECTTSCEEEEET---TTTEEEEECT-TCCEEEEE
T ss_pred cEEE--EeCCCcCC---------C-ceeeEECCCCCEEEEec---CCceEEEECC-CCCEEEec
Confidence 2322 23442110 1 22222 5677777532 3567899998 66666554
No 101
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=30.28 E-value=3.9e+02 Score=25.99 Aligned_cols=142 Identities=11% Similarity=0.045 Sum_probs=70.8
Q ss_pred eEEEEcCCC-CceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCC--
Q 017140 118 YATLCNPST-RQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGP-- 194 (376)
Q Consensus 118 ~~~V~NP~T-~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~-- 194 (376)
.++++|..+ ++.. .+ .........+..+.+ + ++.+.++...........+.+++..++..+.+-...
T Consensus 264 ~l~~~d~~~~~~~~------~~--~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 333 (741)
T 2ecf_A 264 KLGVISPAEQAQTQ------WI--DLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP 333 (741)
T ss_dssp EEEEECSSTTCCCE------EE--CCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred EEEEEECCCCCceE------Ee--cCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC
Confidence 688999999 8877 55 322111122344555 4 344544443222223456777888887665432111
Q ss_pred Ccc-C-CCcceEECceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccce--EEeCC-eEEEEEccCCC
Q 017140 195 NYY-P-QRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESEL--IVYSG-RPAIADHLLLE 269 (376)
Q Consensus 195 ~~~-~-~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l--~~~~G-~L~l~~~~~~~ 269 (376)
.+. . ......-+|.+++....+. ...|..+|.++. .. .+..... ....+ ..-+| .|++... ...
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~--~l~~~~~---~v~~~~~~s~dg~~l~~~~~-~~~ 402 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AA--ALTHGNW---SVDELLAVDEKAGLAYFRAG-IES 402 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EE--ESCCSSS---CEEEEEEEETTTTEEEEEEC-SSC
T ss_pred CcCCcCCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-ee--eeeecce---EEEeEeEEeCCCCEEEEEEe-CCC
Confidence 110 0 1112223788777665432 137888887665 33 3322211 11112 23355 4555544 212
Q ss_pred CCeEEEEEecc
Q 017140 270 DATMTIWVLDE 280 (376)
Q Consensus 270 ~~~l~IW~l~~ 280 (376)
...+.||.++.
T Consensus 403 ~~~~~l~~~~~ 413 (741)
T 2ecf_A 403 ARESQIYAVPL 413 (741)
T ss_dssp TTCBEEEEEET
T ss_pred CceEEEEEEEc
Confidence 34788999864
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=30.10 E-value=5e+02 Score=27.20 Aligned_cols=188 Identities=13% Similarity=0.110 Sum_probs=89.7
Q ss_pred ecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcC
Q 017140 113 MDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKG 192 (376)
Q Consensus 113 ~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 192 (376)
..++ .+.|+|..|++... .+ ... ...+..+.+.+. +.+-+.+. . ...+.|++..++.-...-.
T Consensus 634 ~~d~-~i~vw~~~~~~~~~-----~~--~~h---~~~v~~~~~s~~-~~~l~s~~-~----d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 634 GADK-TLQVFKAETGEKLL-----DI--KAH---EDEVLCCAFSSD-DSYIATCS-A----DKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp ETTS-CEEEEETTTCCEEE-----EE--CCC---SSCEEEEEECTT-SSEEEEEE-T----TSEEEEEETTTCCEEEEEE
T ss_pred eCCC-eEEEEECCCCCEEE-----Ee--ccC---CCCEEEEEEecC-CCEEEEEe-C----CCeEEEEECCCCceEEEEc
Confidence 3455 89999999988661 34 322 122356666663 34433332 2 4478999988874322110
Q ss_pred CCCccCCCcceEE----CceEEEEEecCCCCCCccEEEEEEcCCcceEE-EecChhhhccCCccceE-EeCCeEEEEEcc
Q 017140 193 GPNYYPQRESVCV----DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRV-IEIPAKALARRSESELI-VYSGRPAIADHL 266 (376)
Q Consensus 193 ~~~~~~~~~~v~~----~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~~l~-~~~G~L~l~~~~ 266 (376)
.. ...-.++.+ ++.+...+..+ ..|..+|+.+..... +...... ...+. .-+|...+...
T Consensus 697 ~~--~~~v~~~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~~h~~~-----v~~~~~sp~~~~l~s~s- 762 (1249)
T 3sfz_A 697 EH--SEQVNCCHFTNKSNHLLLATGSND------FFLKLWDLNQKECRNTMFGHTNS-----VNHCRFSPDDELLASCS- 762 (1249)
T ss_dssp CC--SSCEEEEEECSSSSCCEEEEEETT------SCEEEEETTSSSEEEEECCCSSC-----EEEEEECSSTTEEEEEE-
T ss_pred CC--CCcEEEEEEecCCCceEEEEEeCC------CeEEEEECCCcchhheecCCCCC-----EEEEEEecCCCEEEEEE-
Confidence 00 001111222 22222222222 268888988766433 2211111 11111 22565555555
Q ss_pred CCCCCeEEEEEeccCCCCCeEEEEEEcCCCccc-----ccccccccceeEEee--cCCeEEEeecccCCCcEEEEEeCCC
Q 017140 267 LLEDATMTIWVLDENDGDYWVQIKVFLPEDYGE-----EILEEDIDYFVDCIG--RNNELLLVPQTVSDSVYVIHYDVVN 339 (376)
Q Consensus 267 ~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~-----~~~~~~~~~~~~~~~--~~g~ill~~~~~~~~~~l~~ydl~t 339 (376)
.+..+.+|.+.... -.. .+..+..... .... .. +..+. .+|+.++.. ....+..||+.+
T Consensus 763 --~dg~v~vwd~~~~~---~~~-~~~~~~~~~~~~~~~~~~~---~~-v~~~~~s~dg~~l~~~----~~~~v~~~d~~~ 828 (1249)
T 3sfz_A 763 --ADGTLRLWDVRSAN---ERK-SINVKRFFLSSEDPPEDVE---VI-VKCCSWSADGDKIIVA----AKNKVLLFDIHT 828 (1249)
T ss_dssp --SSSEEEEEEGGGTE---EEE-EEECCCCC--------CCC---CC-BCCCCBCTTSSEEEEE----ETTEEEEEETTT
T ss_pred --CCCeEEEEeCCCCc---ccc-eecccccccccCCcccccc---ce-EEEEEECCCCCEEEEE----cCCcEEEEEecC
Confidence 66889999987431 111 1111110000 0000 01 11222 577777654 356788999988
Q ss_pred CcEEEE
Q 017140 340 RSMRRA 345 (376)
Q Consensus 340 ~~~~~v 345 (376)
+.....
T Consensus 829 ~~~~~~ 834 (1249)
T 3sfz_A 829 SGLLAE 834 (1249)
T ss_dssp CCEEEE
T ss_pred CCceeE
Confidence 876544
No 103
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=30.06 E-value=81 Score=25.24 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=28.4
Q ss_pred eEEEEcCCCC-ceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEe
Q 017140 118 YATLCNPSTR-QTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSW 168 (376)
Q Consensus 118 ~~~V~NP~T~-~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~ 168 (376)
.+++.||.|+ +|. |..... ..+.+.+|...+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~Wv----------P~g~~~--~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWV----------PTSKHA--VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSE----------ESCSSC--EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCcee----------ecCCCC--eEEEEEEcCCCCEEEEEEcc
Confidence 7899999997 898 433222 12566689888899999854
No 104
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=29.84 E-value=3.1e+02 Score=24.75 Aligned_cols=125 Identities=12% Similarity=0.062 Sum_probs=62.0
Q ss_pred EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC----ce
Q 017140 112 LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN----SW 187 (376)
Q Consensus 112 ~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~----~W 187 (376)
+.... .+...++-+++.. .+. +.. ....++.+|+..+. |..... ....+..++.... ..
T Consensus 88 ~~~~~-~I~~i~l~~~~~~------~~~-~~~----~~~~~l~~d~~~~~--lywsD~---~~~~I~~~~~~g~~~~~~~ 150 (400)
T 3p5b_L 88 FTNRH-EVRKMTLDRSEYT------SLI-PNL----RNVVALDTEVASNR--IYWSDL---SQRMICSTQLDRAHGVSSY 150 (400)
T ss_dssp EEETT-EEEEECTTSCSCE------EEE-CSC----SCEEEEEEETTTTE--EEEEET---TTTEEEEEEC------CCC
T ss_pred Eeccc-eeEEEccCCccee------Eec-ccc----CcceEEeeeeccCc--eEEEec---CCCeEEEEEcccCCCCCcc
Confidence 45555 6777777776665 330 222 12278888876553 222222 1334555555431 11
Q ss_pred EECcCCCCccCCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE--eCCeEEE
Q 017140 188 RPLKGGPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV--YSGRPAI 262 (376)
Q Consensus 188 ~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~--~~G~L~l 262 (376)
..+... ......++.+ +|.|||..... ..|.++|++......+-. .... ...-++. .+|.||.
T Consensus 151 ~~~~~~--~~~~p~glavD~~~~~lY~~d~~~------~~I~~~~~~g~~~~~l~~-~~~~---~P~~iavdp~~g~ly~ 218 (400)
T 3p5b_L 151 DTVISR--DIQAPDGLAVDWIHSNIYWTDSVL------GTVSVADTKGVKRKTLFR-ENGS---KPRAIVVDPVHGFMYW 218 (400)
T ss_dssp EEEECS--SCSCEEEEEEETTTTEEEEEETTT------TEEEEECTTTCSEEEEEE-CSSC---CEEEEEEETTTTEEEE
T ss_pred eEEEeC--CCCCcccEEEEecCCceEEEECCC------CeEEEEeCCCCceEEEEe-CCCC---CcceEEEecccCeEEE
Confidence 211110 1112234444 68999997654 289999998765544421 1110 1112222 4688888
Q ss_pred EEc
Q 017140 263 ADH 265 (376)
Q Consensus 263 ~~~ 265 (376)
...
T Consensus 219 td~ 221 (400)
T 3p5b_L 219 TDW 221 (400)
T ss_dssp EEC
T ss_pred EeC
Confidence 875
No 105
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=29.42 E-value=59 Score=24.97 Aligned_cols=30 Identities=10% Similarity=0.190 Sum_probs=22.7
Q ss_pred eEEEeecccCCCcEEEEEeCCCCcEEEEEEeccC
Q 017140 318 ELLLVPQTVSDSVYVIHYDVVNRSMRRAEIFGLP 351 (376)
Q Consensus 318 ~ill~~~~~~~~~~l~~ydl~t~~~~~v~~~~~~ 351 (376)
+|+... ....++.||..+++|++.+++|..
T Consensus 30 ~Il~~a----~~v~vY~f~~~~~~W~K~~iEG~L 59 (134)
T 2lyd_A 30 EIVDSS----SHVAFYTFNSSQNEWEKTDVEGAF 59 (134)
T ss_dssp EEEEEE----EEEEEEEEETTTTEEEEEEEEEEE
T ss_pred HHHhhC----CeEEEEEecCCcCceeEcCCcceE
Confidence 466643 345678889999999999999874
No 106
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=28.70 E-value=30 Score=21.04 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=13.0
Q ss_pred CCCCHHHHHHHhcCCCc
Q 017140 12 KPIPSEIIYDILTKLPI 28 (376)
Q Consensus 12 ~~LP~Dll~~IL~rLP~ 28 (376)
..||.|+.+|||+--..
T Consensus 22 ~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 22 KQLPADIQEEILSGKSR 38 (48)
T ss_dssp TTSCHHHHHHHTTCCCS
T ss_pred HHCcHHHHHHHHhcchH
Confidence 46899999999876543
No 107
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=28.39 E-value=4.5e+02 Score=26.10 Aligned_cols=121 Identities=9% Similarity=0.070 Sum_probs=62.9
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCC-cceEE-EecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEecc---
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHE-ESFRV-IEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDE--- 280 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~-~~~~~-i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~--- 280 (376)
++.+|++...+... ...|...|+++ +.|.. + +|..... ....+...++.|++... ......||+++-
T Consensus 330 g~~l~~~t~~~~a~--~~~L~~~d~~~~~~~~~~l-i~~~~~~--~l~~~~~~~~~lv~~~~---~~g~~~l~~~dl~~~ 401 (751)
T 2xe4_A 330 TSHLVILTNEGGAV--NHKLLIAPRGQPSDWSHVL-VDHSEDV--FMESIAVRSNYLVVAGR---RAGLTRIWTMMADSQ 401 (751)
T ss_dssp TTEEEEEECTTTCT--TCEEEEEETTSTTCCCCEE-ECCCSSE--EEEEEEECSSEEEEEEE---ETTEEEEEEEECCTT
T ss_pred CCEEEEEeCCCCCC--CcEEEEEcCCCcccceeeE-ECCCCCc--EEEEEEEECCEEEEEEE---eCCEEEEEEEecccc
Confidence 56788887654111 25899999986 57765 3 2221110 01112334667766655 445666777652
Q ss_pred ---CCCCC-eEEEEEEcCCCcccccccccccceeEEe-----e-cCCeEEEeecccCCCcEEEEEeCCCCcEEEEE
Q 017140 281 ---NDGDY-WVQIKVFLPEDYGEEILEEDIDYFVDCI-----G-RNNELLLVPQTVSDSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 281 ---~~~~~-W~~~~~~lp~~~~~~~~~~~~~~~~~~~-----~-~~g~ill~~~~~~~~~~l~~ydl~t~~~~~v~ 346 (376)
...+. -. .+.+|.. .. . ..+. . .++.+++..........++.||+.+++.+.+.
T Consensus 402 ~~~~~~g~~~~--~l~l~~~----~~-----~-~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 402 DGVFKAGTGLR--EVVMEEP----IF-----T-VHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp TSCCCTTTCCE--ECCCCCS----SC-----E-EEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred cccccCCccce--EECCCCc----ee-----E-EEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 01111 11 1234432 00 0 1121 2 23456666543445668999999998877665
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=28.35 E-value=4.4e+02 Score=26.02 Aligned_cols=94 Identities=19% Similarity=0.257 Sum_probs=50.2
Q ss_pred EEEEEEcCCcceEEE-ecChhhhccCCccceEE-eC--CeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCccc
Q 017140 224 VLIAFDLHEESFRVI-EIPAKALARRSESELIV-YS--GRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGE 299 (376)
Q Consensus 224 ~il~fD~~~~~~~~i-~lP~~~~~~~~~~~l~~-~~--G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~ 299 (376)
.|..+|+.++....+ .+..... ....+.- -+ |.+.+... .+..+.||.++. +.|..........
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~~~l~s~s---~Dg~I~vwd~~~---~~~~~~~~~~~h~--- 99 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEG---PVWRVDWAHPKFGTILASCS---YDGKVLIWKEEN---GRWSQIAVHAVHS--- 99 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSS---CEEEEEECCTTSCSEEEEEE---TTSCEEEEEEET---TEEEEEEEECCCS---
T ss_pred cEEEEecCCCCCccceeccCCcC---ceEEEEecCCCCCCEEEEEe---CCCeEEEEECCC---CcccccccccCCC---
Confidence 788888876655544 2222211 1111222 12 66655555 678899999873 4465543211111
Q ss_pred ccccccccceeEEee--cC--CeEEEeecccCCCcEEEEEeCCCC
Q 017140 300 EILEEDIDYFVDCIG--RN--NELLLVPQTVSDSVYVIHYDVVNR 340 (376)
Q Consensus 300 ~~~~~~~~~~~~~~~--~~--g~ill~~~~~~~~~~l~~ydl~t~ 340 (376)
.. +..+. .+ |.+++.. ..+..+..||++++
T Consensus 100 -------~~-V~~v~~sp~~~~~~l~sg---s~dg~I~vwdl~~~ 133 (753)
T 3jro_A 100 -------AS-VNSVQWAPHEYGPLLLVA---SSDGKVSVVEFKEN 133 (753)
T ss_dssp -------SC-EEEEEECCGGGCSEEEEE---ETTSEEEEEECCSS
T ss_pred -------CC-eEEEEECCCCCCCEEEEE---eCCCcEEEEEeecC
Confidence 11 22222 33 6666664 35678888888877
No 109
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=27.74 E-value=66 Score=24.41 Aligned_cols=41 Identities=10% Similarity=-0.032 Sum_probs=25.7
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCcccee-EEEeE---eCCCCcEEEEEEe
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCV-NSFGF---DPVSKKYKVLNSW 168 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~-~~l~~---d~~~~~ykvv~~~ 168 (376)
.++++||.+++|. |........+ +.+.. |...+.|+|+..+
T Consensus 21 ~Vm~~D~~~~~W~----------p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 21 VVMTRDDSSGGWF----------PQEGGGISRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEECTTSSSSE----------ECSCCSCEEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEeeEcCCCCCEe----------eCCCCCcccEEEEEecCCCCCCCCEEEEEEEE
Confidence 7899999999999 4332211112 22323 5566789998854
No 110
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=26.70 E-value=2.9e+02 Score=23.29 Aligned_cols=106 Identities=8% Similarity=0.204 Sum_probs=55.6
Q ss_pred EEEEEEcCC-cceEE-----EecChhhhccCCccceE-EeCCe-EEEEEccCCCCCeEEEEEeccCCCCCeEEE-EE-Ec
Q 017140 224 VLIAFDLHE-ESFRV-----IEIPAKALARRSESELI-VYSGR-PAIADHLLLEDATMTIWVLDENDGDYWVQI-KV-FL 293 (376)
Q Consensus 224 ~il~fD~~~-~~~~~-----i~lP~~~~~~~~~~~l~-~~~G~-L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~-~~-~l 293 (376)
.|..+|+.+ .+... +..+.... ...+. .-+|+ |++... ....+.+|.++.. .+.+... .+ .+
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pdg~~l~~~~~---~~~~i~~~~~~~~-~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAG----PRHMVFHPNEQYAYCVNE---LNSSVDVWELKDP-HGNIECVQTLDMM 223 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCC----EEEEEECTTSSEEEEEET---TTTEEEEEESSCT-TSCCEEEEEEECS
T ss_pred EEEEEEecCCCceeeecccccccCCCCC----cceEEECCCCCEEEEEeC---CCCEEEEEEecCC-CCcEEEEeecccc
Confidence 799999987 65543 33332211 11122 22454 656654 5678999999643 2345433 22 24
Q ss_pred CCCcccccccccccceeE-Eee-cCCeEEEeecccCCCcEEEEEeCC--CCcEEEEE
Q 017140 294 PEDYGEEILEEDIDYFVD-CIG-RNNELLLVPQTVSDSVYVIHYDVV--NRSMRRAE 346 (376)
Q Consensus 294 p~~~~~~~~~~~~~~~~~-~~~-~~g~ill~~~~~~~~~~l~~ydl~--t~~~~~v~ 346 (376)
|..+.. . .. .. +.. .+|+.+++.. ..+..+..||++ +++++.+.
T Consensus 224 ~~~~~~--~----~~-~~~i~~s~dg~~l~v~~--~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 224 PENFSD--T----RW-AADIHITPDGRHLYACD--RTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp CTTCCS--C----CC-EEEEEECTTSSEEEEEE--TTTTEEEEEEECTTSCCEEEEE
T ss_pred Cccccc--c----CC-ccceEECCCCCEEEEEe--cCCCEEEEEEEcCCCCceEEee
Confidence 432211 0 11 21 222 5776555432 246688899988 66666664
No 111
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=26.20 E-value=3.7e+02 Score=24.44 Aligned_cols=121 Identities=12% Similarity=0.127 Sum_probs=63.2
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCCcceEEE---e-cCh-hhh-cc-CCccc-eEE--eCCeEEEEEccCC----CCC
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVI---E-IPA-KAL-AR-RSESE-LIV--YSGRPAIADHLLL----EDA 271 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i---~-lP~-~~~-~~-~~~~~-l~~--~~G~L~l~~~~~~----~~~ 271 (376)
+|.++|..... .+.++|+.++.-..+ . +.. ... .+ ..... +.. -+++||+...... ...
T Consensus 237 dG~~~~vs~~g-------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 237 AGRLVWPTYTG-------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp TTEEEEEBTTS-------EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred CCcEEEEeCCC-------EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 78898976632 799999987754332 2 111 000 00 00111 222 3568888753111 123
Q ss_pred eEEEEEeccCCCCCeEEE-EEEcCCCcccccccccccceeEE-eecCCe-EEEeecccCCCcEEEEEeCCCCcE-EEEEE
Q 017140 272 TMTIWVLDENDGDYWVQI-KVFLPEDYGEEILEEDIDYFVDC-IGRNNE-LLLVPQTVSDSVYVIHYDVVNRSM-RRAEI 347 (376)
Q Consensus 272 ~l~IW~l~~~~~~~W~~~-~~~lp~~~~~~~~~~~~~~~~~~-~~~~g~-ill~~~~~~~~~~l~~ydl~t~~~-~~v~~ 347 (376)
.=+||+++ ...+..+ .+.++.. . ..+ +..+|+ .+|..+ ..+..|..||..+++. +.+..
T Consensus 310 ~~~V~viD---~~t~kv~~~i~vg~~-----------~-~~lavs~D~~~~ly~tn--~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 310 SRFVVVLD---AKTGERLAKFEMGHE-----------I-DSINVSQDEKPLLYALS--TGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EEEEEEEE---TTTCCEEEEEEEEEE-----------E-CEEEECSSSSCEEEEEE--TTTTEEEEEETTTCCEEEEECC
T ss_pred CCEEEEEE---CCCCeEEEEEECCCC-----------c-ceEEECCCCCeEEEEEc--CCCCeEEEEECCCCcEEEEecC
Confidence 46799997 3344444 3333311 1 112 225665 666642 3567899999999885 33444
Q ss_pred ecc
Q 017140 348 FGL 350 (376)
Q Consensus 348 ~~~ 350 (376)
.+.
T Consensus 373 ~~~ 375 (386)
T 3sjl_D 373 LGH 375 (386)
T ss_dssp CCS
T ss_pred CCC
Confidence 333
No 112
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=26.04 E-value=3.3e+02 Score=23.77 Aligned_cols=179 Identities=11% Similarity=-0.015 Sum_probs=82.1
Q ss_pred ecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcC
Q 017140 113 MDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKG 192 (376)
Q Consensus 113 ~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 192 (376)
..+. .+.|+|..+++... .+ ... ...+..+.+.+..+.+.+.+ .. ...+.+|+.+++.-.....
T Consensus 158 s~dg-~v~iwd~~~~~~~~-----~~--~~h---~~~v~~v~~s~~~~~~~~s~-~~----dg~v~~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 158 GKDF-SVKVWDLSQKAVLK-----SY--NAH---SSEVNCVAACPGKDTIFLSC-GE----DGRILLWDTRKPKPATRID 221 (357)
T ss_dssp ETTS-CEEEEETTTTEEEE-----EE--CCC---SSCEEEEEECTTCSSCEEEE-ET----TSCEEECCTTSSSCBCBCC
T ss_pred eCCC-eEEEEECCCCcEEE-----EE--cCC---CCCEEEEEEccCCCceeeee-cc----CCceEEEECCCCceeeeee
Confidence 3455 79999999988761 23 211 12234555555443333322 21 3467787776654221111
Q ss_pred CCCccCCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEE-eCC-eEEEEEcc
Q 017140 193 GPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIV-YSG-RPAIADHL 266 (376)
Q Consensus 193 ~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~-~~G-~L~l~~~~ 266 (376)
.........++.+ ++.+...+..+ ..|..+|+.+.+. ..+...... ...+.- -+| ++.+...
T Consensus 222 ~~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~~~~~-----v~~l~~sp~~~~~lasgs- 289 (357)
T 4g56_B 222 FCASDTIPTSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAVHSQN-----ITGLAYSYHSSPFLASIS- 289 (357)
T ss_dssp CTTCCSCEEEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECCCSSC-----EEEEEECSSSSCCEEEEE-
T ss_pred eccccccccchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEecccee-----EEEEEEcCCCCCEEEEEe-
Confidence 1000001122333 23343333333 2688888876543 333322211 111221 234 4433334
Q ss_pred CCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee---cCCeEEEeecccCCCcEEEEEeCCCCc
Q 017140 267 LLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG---RNNELLLVPQTVSDSVYVIHYDVVNRS 341 (376)
Q Consensus 267 ~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~---~~g~ill~~~~~~~~~~l~~ydl~t~~ 341 (376)
.+..+.||-++. + ..+. .+... .. +..+. .+|.+|+.+ +.+..|..+|+.++.
T Consensus 290 --~D~~i~iwd~~~---~--~~~~-~~~H~----------~~-V~~vafsP~d~~~l~s~---s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 290 --EDCTVAVLDADF---S--EVFR-DLSHR----------DF-VTGVAWSPLDHSKFTTV---GWDHKVLHHHLPSEG 345 (357)
T ss_dssp --TTSCEEEECTTS---C--EEEE-ECCCS----------SC-EEEEEECSSSTTEEEEE---ETTSCEEEEECC---
T ss_pred --CCCEEEEEECCC---C--cEeE-ECCCC----------CC-EEEEEEeCCCCCEEEEE---cCCCeEEEEECCCCC
Confidence 567899996642 2 1222 22110 11 33332 367777754 357789999986643
No 113
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=25.83 E-value=3.1e+02 Score=23.43 Aligned_cols=111 Identities=5% Similarity=0.035 Sum_probs=61.8
Q ss_pred ceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCC
Q 017140 207 GFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGDY 285 (376)
Q Consensus 207 G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~ 285 (376)
|.+|-....... ..|.++|+.+.+- ..+++|.... ..-+...+++|+++.. ....+ ++.+- ..
T Consensus 32 g~Lyvstg~~~~----s~v~~iD~~tg~v~~~i~l~~~~f----geGi~~~g~~lyv~t~---~~~~v--~viD~---~t 95 (266)
T 2iwa_A 32 DTLFESTGLYGR----SSVRQVALQTGKVENIHKMDDSYF----GEGLTLLNEKLYQVVW---LKNIG--FIYDR---RT 95 (266)
T ss_dssp TEEEEEECSTTT----CEEEEEETTTCCEEEEEECCTTCC----EEEEEEETTEEEEEET---TCSEE--EEEET---TT
T ss_pred CeEEEECCCCCC----CEEEEEECCCCCEEEEEecCCCcc----eEEEEEeCCEEEEEEe---cCCEE--EEEEC---CC
Confidence 677776653211 3899999987665 5567765432 2224445789999987 44554 44431 22
Q ss_pred eEEE-EEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcE-EEEEEe
Q 017140 286 WVQI-KVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSM-RRAEIF 348 (376)
Q Consensus 286 W~~~-~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~-~~v~~~ 348 (376)
-..+ .+..+ . . - . +. +..+|+.+++.. ....+...|++|.+. +.|.+.
T Consensus 96 ~~v~~~i~~g-~--~--~-----g-~g-lt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 96 LSNIKNFTHQ-M--K--D-----G-WG-LATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp TEEEEEEECC-S--S--S-----C-CE-EEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECE
T ss_pred CcEEEEEECC-C--C--C-----e-EE-EEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEEC
Confidence 3333 23332 0 1 1 1 11 223555444443 356899999999774 555543
No 114
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=25.79 E-value=2.9e+02 Score=23.07 Aligned_cols=196 Identities=8% Similarity=-0.004 Sum_probs=93.4
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEEC-cCCCCc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPL-KGGPNY 196 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~~~~~~ 196 (376)
.+.++||.+++.. .+..|..........++.+++..+..-| . .. ...+.+|+.. +..+.+ ......
T Consensus 47 ~i~~~d~~~g~~~------~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~-~~----~~~l~~~d~~-g~~~~~~~~~~~~ 113 (314)
T 1pjx_A 47 EILRIDLKTGKKT------VICKPEVNGYGGIPAGCQCDRDANQLFV-A-DM----RLGLLVVQTD-GTFEEIAKKDSEG 113 (314)
T ss_dssp EEEEECTTTCCEE------EEECCEETTEECCEEEEEECSSSSEEEE-E-ET----TTEEEEEETT-SCEEECCSBCTTS
T ss_pred EEEEEeCCCCcEE------EEEecccCCCCCCCceEEEecCCCcEEE-E-EC----CCCEEEEeCC-CCEEEEEeccCCC
Confidence 7889999999887 5511111101111266777764233222 2 11 2267788887 766654 322111
Q ss_pred --cCCCcceEE--CceEEEEEecCC---------CCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE----eCC-
Q 017140 197 --YPQRESVCV--DGFVYFRSWVST---------HKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV----YSG- 258 (376)
Q Consensus 197 --~~~~~~v~~--~G~lyw~~~~~~---------~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~----~~G- 258 (376)
......+.+ +|.+|+...... .......|..+|.+ .++..+.-... . .... ... -+|
T Consensus 114 ~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-~--~~~i-~~~~~~d~dg~ 188 (314)
T 1pjx_A 114 RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ-F--PNGI-AVRHMNDGRPY 188 (314)
T ss_dssp CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES-S--EEEE-EEEECTTSCEE
T ss_pred ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC-C--cceE-EEecccCCCCC
Confidence 112234444 577776654320 00001379999987 55544311000 0 0011 122 345
Q ss_pred eEEEEEccCCCCCeEEEEEeccCCCCCeEEE--EEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEe
Q 017140 259 RPAIADHLLLEDATMTIWVLDENDGDYWVQI--KVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYD 336 (376)
Q Consensus 259 ~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~--~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~yd 336 (376)
.|++... ....+.+|.++.. +..... ...++.. ..+ ...-..+..+|.+++... ....|..||
T Consensus 189 ~l~v~~~---~~~~i~~~~~~~~--g~~~~~~~~~~~~~~----~~~---~p~~i~~d~~G~l~v~~~---~~~~i~~~d 253 (314)
T 1pjx_A 189 QLIVAET---PTKKLWSYDIKGP--AKIENKKVWGHIPGT----HEG---GADGMDFDEDNNLLVANW---GSSHIEVFG 253 (314)
T ss_dssp EEEEEET---TTTEEEEEEEEET--TEEEEEEEEEECCCC----SSC---EEEEEEEBTTCCEEEEEE---TTTEEEEEC
T ss_pred EEEEEEC---CCCeEEEEECCCC--CccccceEEEECCCC----CCC---CCCceEECCCCCEEEEEc---CCCEEEEEc
Confidence 5666655 4567777776522 223322 1233321 001 010112226788877532 356899999
Q ss_pred CCCCc-EEEEE
Q 017140 337 VVNRS-MRRAE 346 (376)
Q Consensus 337 l~t~~-~~~v~ 346 (376)
+++++ .+.+.
T Consensus 254 ~~~g~~~~~~~ 264 (314)
T 1pjx_A 254 PDGGQPKMRIR 264 (314)
T ss_dssp TTCBSCSEEEE
T ss_pred CCCCcEeEEEe
Confidence 98554 34443
No 115
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=25.59 E-value=3.3e+02 Score=23.52 Aligned_cols=125 Identities=12% Similarity=0.084 Sum_probs=62.3
Q ss_pred EecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCC----Cce
Q 017140 112 LMDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGT----NSW 187 (376)
Q Consensus 112 ~~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~----~~W 187 (376)
++... .+.+.++.+++.. .+- |.... ..++.+|+..+. +..... ....+..++..+ ..-
T Consensus 6 ~~~~~-~I~~i~~~~~~~~------~~~-~~~~~----p~g~~~d~~~~~--ly~~D~---~~~~I~~~~~~g~~~~~~~ 68 (316)
T 1ijq_A 6 FTNRH-EVRKMTLDRSEYT------SLI-PNLRN----VVALDTEVASNR--IYWSDL---SQRMICSTQLDRAHGVSSY 68 (316)
T ss_dssp EECBS-SEEEEETTSCCCE------EEE-CSCSS----EEEEEEETTTTE--EEEEET---TTTEEEEEEC--------C
T ss_pred EECCC-eEEEEECCCcceE------ehh-cCCCc----eEEEEEEeCCCE--EEEEEC---CCCcEEEEECCCCCCCccc
Confidence 44444 6777788777665 330 33211 277888875543 222222 134666666654 111
Q ss_pred EECcCCCCccCCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEE--eCCeEEE
Q 017140 188 RPLKGGPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIV--YSGRPAI 262 (376)
Q Consensus 188 ~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~--~~G~L~l 262 (376)
+.+-. .......++.+ +|.+||..... ..|.++|++...-..+--. ... ....+.. .+|.|++
T Consensus 69 ~~~~~--~~~~~p~glavd~~~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~-~~~---~P~~iavdp~~g~ly~ 136 (316)
T 1ijq_A 69 DTVIS--RDIQAPDGLAVDWIHSNIYWTDSVL------GTVSVADTKGVKRKTLFRE-NGS---KPRAIVVDPVHGFMYW 136 (316)
T ss_dssp EEEEC--SSCSCCCEEEEETTTTEEEEEETTT------TEEEEEETTSSSEEEEEEC-TTC---CEEEEEEETTTTEEEE
T ss_pred EEEEe--CCCCCcCEEEEeecCCeEEEEECCC------CEEEEEeCCCCceEEEEEC-CCC---CcceEEeCCCCCEEEE
Confidence 21111 11112234443 68999987654 3899999987554433111 111 1122232 4788888
Q ss_pred EEc
Q 017140 263 ADH 265 (376)
Q Consensus 263 ~~~ 265 (376)
...
T Consensus 137 ~d~ 139 (316)
T 1ijq_A 137 TDW 139 (316)
T ss_dssp EEC
T ss_pred Ecc
Confidence 865
No 116
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=25.36 E-value=3.1e+02 Score=23.19 Aligned_cols=164 Identities=15% Similarity=0.083 Sum_probs=88.2
Q ss_pred EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCccCCCcc-eEECceEEEEEecCCCCCCccEEEEEE
Q 017140 151 NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYYPQRES-VCVDGFVYFRSWVSTHKNGRTVLIAFD 229 (376)
Q Consensus 151 ~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~-v~~~G~lyw~~~~~~~~~~~~~il~fD 229 (376)
.||.|+. .. +...... .....+.+++.++++=...-..+.. ....+ ...++.+|-+.+... .+.+||
T Consensus 24 qGL~~~~---~~-LyestG~-~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~------~v~v~D 91 (243)
T 3mbr_X 24 EGLFYLR---GH-LYESTGE-TGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNH------EGFVYD 91 (243)
T ss_dssp EEEEEET---TE-EEEEECC-TTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSS------EEEEEE
T ss_pred ccEEEEC---CE-EEEECCC-CCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCC------EEEEEE
Confidence 6888876 22 2222111 1256899999999854322111111 12222 455778999987653 899999
Q ss_pred cCCcc-eEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccc
Q 017140 230 LHEES-FRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDY 308 (376)
Q Consensus 230 ~~~~~-~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~ 308 (376)
.++.+ -..++.|.. ..-|..-+++|++... .. .|+.++-. +..=.. .+.+... +. .+. .
T Consensus 92 ~~tl~~~~ti~~~~~------Gwglt~dg~~L~vSdg----s~--~l~~iDp~-t~~~~~-~I~V~~~-g~-~~~----~ 151 (243)
T 3mbr_X 92 LATLTPRARFRYPGE------GWALTSDDSHLYMSDG----TA--VIRKLDPD-TLQQVG-SIKVTAG-GR-PLD----N 151 (243)
T ss_dssp TTTTEEEEEEECSSC------CCEEEECSSCEEEECS----SS--EEEEECTT-TCCEEE-EEECEET-TE-ECC----C
T ss_pred CCcCcEEEEEeCCCC------ceEEeeCCCEEEEECC----CC--eEEEEeCC-CCeEEE-EEEEccC-Cc-ccc----c
Confidence 98754 356776642 2234444667777643 22 36777522 222111 2322110 00 011 1
Q ss_pred eeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcE-EEEEEecc
Q 017140 309 FVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSM-RRAEIFGL 350 (376)
Q Consensus 309 ~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~-~~v~~~~~ 350 (376)
+.-+. .+|+|+.-. .....+...|+++++. .++...+.
T Consensus 152 -lNeLe~~~G~lyanv---w~s~~I~vIDp~tG~V~~~idl~~l 191 (243)
T 3mbr_X 152 -LNELEWVNGELLANV---WLTSRIARIDPASGKVVAWIDLQAL 191 (243)
T ss_dssp -EEEEEEETTEEEEEE---TTTTEEEEECTTTCBEEEEEECGGG
T ss_pred -ceeeEEeCCEEEEEE---CCCCeEEEEECCCCCEEEEEECCcC
Confidence 21122 478877543 3466899999999996 55665543
No 117
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=24.82 E-value=3.3e+02 Score=23.34 Aligned_cols=161 Identities=10% Similarity=0.065 Sum_probs=85.2
Q ss_pred EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCce-EECcCCCCccCCCcc-eEECceEEEEEecCCCCCCccEEEEE
Q 017140 151 NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSW-RPLKGGPNYYPQRES-VCVDGFVYFRSWVSTHKNGRTVLIAF 228 (376)
Q Consensus 151 ~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~~~~~~~~~~~~~-v~~~G~lyw~~~~~~~~~~~~~il~f 228 (376)
.||.++. + .-.+.-..++ ...+.+++.++++= +.+...+ . ....+ ...++.+|-+++... .+.+|
T Consensus 46 qGL~~~~--~-~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~-~-~FgeGit~~g~~ly~ltw~~~------~v~v~ 112 (262)
T 3nol_A 46 EGFFYRN--G-YFYESTGLNG--RSSIRKVDIESGKTLQQIELGK-R-YFGEGISDWKDKIVGLTWKNG------LGFVW 112 (262)
T ss_dssp EEEEEET--T-EEEEEEEETT--EEEEEEECTTTCCEEEEEECCT-T-CCEEEEEEETTEEEEEESSSS------EEEEE
T ss_pred ceEEEEC--C-EEEEECCCCC--CceEEEEECCCCcEEEEEecCC-c-cceeEEEEeCCEEEEEEeeCC------EEEEE
Confidence 6777762 2 2222222221 45788999998853 2222221 1 12233 445678988877653 89999
Q ss_pred EcCCcc-eEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCccccccccccc
Q 017140 229 DLHEES-FRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDID 307 (376)
Q Consensus 229 D~~~~~-~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~ 307 (376)
|.++.+ -..++.|.. ..-+..-++.|++... .. .||.++-. +..= ...+.+... ++ .+.
T Consensus 113 D~~t~~~~~ti~~~~e------G~glt~dg~~L~~SdG----s~--~i~~iDp~-T~~v-~~~I~V~~~-g~-~~~---- 172 (262)
T 3nol_A 113 NIRNLRQVRSFNYDGE------GWGLTHNDQYLIMSDG----TP--VLRFLDPE-SLTP-VRTITVTAH-GE-ELP---- 172 (262)
T ss_dssp ETTTCCEEEEEECSSC------CCCEEECSSCEEECCS----SS--EEEEECTT-TCSE-EEEEECEET-TE-ECC----
T ss_pred ECccCcEEEEEECCCC------ceEEecCCCEEEEECC----CC--eEEEEcCC-CCeE-EEEEEeccC-Cc-ccc----
Confidence 998754 466777642 2223444556666543 12 47777532 2211 112333210 10 111
Q ss_pred ceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcE-EEEEEe
Q 017140 308 YFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSM-RRAEIF 348 (376)
Q Consensus 308 ~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~-~~v~~~ 348 (376)
. ++-+. .+|+|+... .....+...|++|+++ ++|...
T Consensus 173 ~-lNELe~~~G~lyan~---w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 173 E-LNELEWVDGEIFANV---WQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp C-EEEEEEETTEEEEEE---TTSSEEEEECTTTCBEEEEEECT
T ss_pred c-cceeEEECCEEEEEE---ccCCeEEEEECCCCcEEEEEECC
Confidence 1 11121 478777543 3466899999999996 555654
No 118
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=24.69 E-value=3e+02 Score=22.74 Aligned_cols=183 Identities=8% Similarity=0.011 Sum_probs=86.6
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCcc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYY 197 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 197 (376)
++.++++-++... .+. +.. .....++.+|+..+...+ ... ....+.+++.....-+.+... ..
T Consensus 59 ~I~~~~~~g~~~~------~~~-~~~---~~~p~~ia~d~~~~~lyv--~d~---~~~~I~~~~~~g~~~~~~~~~--~~ 121 (267)
T 1npe_A 59 SIGRASLHGGEPT------TII-RQD---LGSPEGIALDHLGRTIFW--TDS---QLDRIEVAKMDGTQRRVLFDT--GL 121 (267)
T ss_dssp EEEEEESSSCCCE------EEE-CTT---CCCEEEEEEETTTTEEEE--EET---TTTEEEEEETTSCSCEEEECS--SC
T ss_pred EEEEEecCCCCcE------EEE-ECC---CCCccEEEEEecCCeEEE--EEC---CCCEEEEEEcCCCCEEEEEEC--CC
Confidence 6777777665443 220 211 011167778875443222 211 134677777654332222111 11
Q ss_pred CCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEE
Q 017140 198 PQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMT 274 (376)
Q Consensus 198 ~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~ 274 (376)
....++.+ +|.+||....... ..|..++++......+.-. ... ....+.+..-++.||++.. ....+.
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~----~~I~~~~~dg~~~~~~~~~-~~~-~P~gia~d~~~~~lyv~d~---~~~~I~ 192 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDN----PKIETSHMDGTNRRILAQD-NLG-LPNGLTFDAFSSQLCWVDA---GTHRAE 192 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSS----CEEEEEETTSCCCEEEECT-TCS-CEEEEEEETTTTEEEEEET---TTTEEE
T ss_pred CCccEEEEeeCCCEEEEEECCCCC----cEEEEEecCCCCcEEEEEC-CCC-CCcEEEEcCCCCEEEEEEC---CCCEEE
Confidence 12233444 5889998754211 3788999876554444211 111 0011222223578998877 444444
Q ss_pred EEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCCCcE-EEEE
Q 017140 275 IWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVNRSM-RRAE 346 (376)
Q Consensus 275 IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t~~~-~~v~ 346 (376)
+..++ +. .....++.. . .+ ..+. .++.+++.. .....+..+|+++++. +.+.
T Consensus 193 ~~~~~--g~----~~~~~~~~~------~---~P--~gi~~d~~~lyva~---~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 193 CLNPA--QP----GRRKVLEGL------Q---YP--FAVTSYGKNLYYTD---WKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEETT--EE----EEEEEEECC------C---SE--EEEEEETTEEEEEE---TTTTEEEEEETTTTEEEEEEC
T ss_pred EEecC--CC----ceEEEecCC------C---Cc--eEEEEeCCEEEEEE---CCCCeEEEEeCCCCCceEEEc
Confidence 43332 11 111111111 1 11 1222 456666643 2456899999998764 4444
No 119
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=24.28 E-value=4e+02 Score=24.06 Aligned_cols=100 Identities=14% Similarity=0.154 Sum_probs=52.4
Q ss_pred EEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCccCCCcceEE---CceEEEEEecCCCCCCccEEEE
Q 017140 151 NSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIA 227 (376)
Q Consensus 151 ~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~ 227 (376)
.++..|+..+.. .+.-.. ....++.++.....=+.+... .+....++.+ +|.|||.-... ..|.+
T Consensus 205 ~~iavdp~~g~l-y~td~~---~~~~I~~~~~dG~~~~~~~~~--~l~~P~glavd~~~~~lY~aD~~~------~~I~~ 272 (400)
T 3p5b_L 205 RAIVVDPVHGFM-YWTDWG---TPAKIKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKL------HSISS 272 (400)
T ss_dssp EEEEEETTTTEE-EEEECS---SSCCEEEEETTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEETTT------TEEEE
T ss_pred ceEEEecccCeE-EEEeCC---CCCEEEEEeCCCCccEEEEEC--CCCceEEEEEEeCCCEEEEEECCC------CEEEE
Confidence 567778754422 111111 123566665543322222111 1112234444 47899986543 38999
Q ss_pred EEcCCcceEEE-ecChhhhccCCccceEEeCCeEEEEEc
Q 017140 228 FDLHEESFRVI-EIPAKALARRSESELIVYSGRPAIADH 265 (376)
Q Consensus 228 fD~~~~~~~~i-~lP~~~~~~~~~~~l~~~~G~L~l~~~ 265 (376)
+|++...-..+ ..+.... ...-+...++.|+....
T Consensus 273 ~d~dG~~~~~~~~~~~~l~---~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 273 IDVNGGNRKTILEDEKRLA---HPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp EETTSCCCEEEEECSSTTS---SEEEEEEETTEEEEEES
T ss_pred EeCCCCccEEEEeCCCCCC---CCEEEEEeCCEEEEecC
Confidence 99987555444 3322221 23345667889999886
No 120
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=24.01 E-value=57 Score=24.41 Aligned_cols=40 Identities=8% Similarity=-0.068 Sum_probs=21.8
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeE-----eCCCCcEEEEEEe
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGF-----DPVSKKYKVLNSW 168 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~-----d~~~~~ykvv~~~ 168 (376)
.++.+||.|++|. |........ ..+.+ |...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~----------p~~~g~ls~-v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 12 VVMTRDDSSGGWL----------QLGGGGLSS-VTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEEECSSSSCEE----------EGGGCCCEE-EEEECC---------CCEEEEEE
T ss_pred EEeeEcCCCCCEe----------eCCCCCccc-EEEEEecCcCCCCCCEEEEEEEE
Confidence 6899999999999 333211111 22222 4556789998854
No 121
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=23.49 E-value=3.5e+02 Score=23.20 Aligned_cols=139 Identities=12% Similarity=0.136 Sum_probs=71.0
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC--ceEECcCC--
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN--SWRPLKGG-- 193 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~--~W~~~~~~-- 193 (376)
.++++|+.|++.. .. -... ......++.+|+... . +.... ....+.+|+.... .=..+...
T Consensus 70 ~i~~~d~~~g~~~------~~--~~~~-~~~~p~gia~d~~g~-l--~v~d~---~~~~v~~~~~~g~~~~~~~~~~~~~ 134 (329)
T 3fvz_A 70 TILVIDPNNAEIL------QS--SGKN-LFYLPHGLSIDTDGN-Y--WVTDV---ALHQVFKLDPHSKEGPLLILGRSMQ 134 (329)
T ss_dssp CEEEECTTTCCEE------EE--ECTT-TCSSEEEEEECTTSC-E--EEEET---TTTEEEEECTTCSSCCSEEESBTTB
T ss_pred cEEEEECCCCeEE------ec--cCCC-ccCCceEEEECCCCC-E--EEEEC---CCCEEEEEeCCCCeEEEEEecccCC
Confidence 6899999988876 33 1111 111126777786443 2 22221 1346777776543 11222111
Q ss_pred ----CCccCCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhh-----hccCCccceEE-eC-Ce
Q 017140 194 ----PNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKA-----LARRSESELIV-YS-GR 259 (376)
Q Consensus 194 ----~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~-----~~~~~~~~l~~-~~-G~ 259 (376)
...+....++.+ +|.+|+...... ..|..||.+......+..+... ........+.. -+ |.
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~-----~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~ 209 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN-----SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ 209 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCCEEEEECSSC-----CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTE
T ss_pred CCCCccccCCCcEEEEeCCCCeEEEEeCCCC-----CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE
Confidence 111112234555 578988874222 3899999766555555321110 00001122222 24 89
Q ss_pred EEEEEccCCCCCeEEEEEec
Q 017140 260 PAIADHLLLEDATMTIWVLD 279 (376)
Q Consensus 260 L~l~~~~~~~~~~l~IW~l~ 279 (376)
|+++.. ....+.+|..+
T Consensus 210 l~v~d~---~~~~I~~~~~~ 226 (329)
T 3fvz_A 210 LCVADR---ENGRIQCFKTD 226 (329)
T ss_dssp EEEEET---TTTEEEEEETT
T ss_pred EEEEEC---CCCEEEEEECC
Confidence 999877 66778888775
No 122
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=23.36 E-value=1.3e+02 Score=22.90 Aligned_cols=13 Identities=8% Similarity=-0.084 Sum_probs=12.2
Q ss_pred eEEEEcCCCCcee
Q 017140 118 YATLCNPSTRQTF 130 (376)
Q Consensus 118 ~~~V~NP~T~~~~ 130 (376)
.+.+.||.|++|.
T Consensus 19 ~Vm~~Dd~tk~Wl 31 (130)
T 3syx_A 19 VVMTRDDSSGGWL 31 (130)
T ss_dssp EEEEECSSSSCEE
T ss_pred EeeeEcCCCCceE
Confidence 6899999999999
No 123
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=23.27 E-value=2.8e+02 Score=26.82 Aligned_cols=79 Identities=10% Similarity=0.088 Sum_probs=45.9
Q ss_pred cEEEEEeCCC--ceEECcCCCCccCCCcceEECceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccc
Q 017140 176 EYRIFELGTN--SWRPLKGGPNYYPQRESVCVDGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESE 252 (376)
Q Consensus 176 ~~~vyss~~~--~W~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~ 252 (376)
.+..++..++ .|+.-...+.. ....+..+|.+|. ...+ ..+.+||.++.+- -.+++|..... ...
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~~~--~g~~~tagglvf~-g~~d------g~l~A~D~~tG~~lW~~~~~~g~~a---~P~ 534 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLPLW--AGVLATAGNLVFT-GTGD------GYFKAFDAKSGKELWKFQTGSGIVS---PPI 534 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSCCC--SCCEEETTTEEEE-ECTT------SEEEEEETTTCCEEEEEECSSCCCS---CCE
T ss_pred eEEEEECCCCCEEEEecCCCCCc--ccceEeCCCEEEE-ECCC------CcEEEEECCCCCEEEEecCCCCccc---Cce
Confidence 4556666677 58764332211 2223445677776 3332 2899999987653 34577765431 222
Q ss_pred eEEeCCeEEEEEcc
Q 017140 253 LIVYSGRPAIADHL 266 (376)
Q Consensus 253 l~~~~G~L~l~~~~ 266 (376)
.-+.+|++|++...
T Consensus 535 ~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 535 TWEQDGEQYLGVTV 548 (582)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EEEECCEEEEEEEc
Confidence 33579999998663
No 124
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=23.07 E-value=4.1e+02 Score=23.77 Aligned_cols=183 Identities=11% Similarity=0.046 Sum_probs=85.3
Q ss_pred eEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEECcCCCCcc
Q 017140 118 YATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPLKGGPNYY 197 (376)
Q Consensus 118 ~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 197 (376)
++..+++-++... .+ -.... ....++++|+..+...+. .. ....+++++.....-+.+... .+
T Consensus 139 ~I~r~~~~g~~~~------~~--~~~~~--~~p~glavd~~~g~lY~~--d~---~~~~I~~~~~dg~~~~~l~~~--~l 201 (386)
T 3v65_B 139 RILRANLNGSNVE------EV--VSTGL--ESPGGLAVDWVHDKLYWT--DS---GTSRIEVANLDGAHRKVLLWQ--SL 201 (386)
T ss_dssp EEEEEETTSCCEE------EE--ECSSC--SCCCCEEEETTTTEEEEE--ET---TTTEEEECBTTSCSCEEEECS--SC
T ss_pred cEEEEecCCCCcE------EE--EeCCC--CCccEEEEEeCCCeEEEE--cC---CCCeEEEEeCCCCceEEeecC--CC
Confidence 6777777766544 32 11100 001567777655432221 11 133556655543322222111 11
Q ss_pred CCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceEEeCCeEEEEEccCCCCCeEE
Q 017140 198 PQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELIVYSGRPAIADHLLLEDATMT 274 (376)
Q Consensus 198 ~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~~~~G~L~l~~~~~~~~~~l~ 274 (376)
....++.+ +|.|||...... ..|..+|++...-..+-- .... ....+.+-..+|+||++.. ... .
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~~~-~~~~-~PnGlavd~~~~~lY~aD~---~~~--~ 269 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNT-----PRIEASSMDGSGRRIIAD-THLF-WPNGLTIDYAGRRMYWVDA---KHH--V 269 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEEC-SSCS-CEEEEEEEGGGTEEEEEET---TTT--E
T ss_pred CCCcEEEEEcCCCeEEEeccCCC-----CEEEEEeCCCCCcEEEEE-CCCC-CeeeEEEeCCCCEEEEEEC---CCC--E
Confidence 12234444 589999875441 389999998755444321 1111 0001222224789999987 444 4
Q ss_pred EEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcEEEEEeCCC-CcEEEEE
Q 017140 275 IWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVYVIHYDVVN-RSMRRAE 346 (376)
Q Consensus 275 IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~l~~ydl~t-~~~~~v~ 346 (376)
|+..+-.+...-.. +... +. .+ ..+. .++.|++.. .....|..+|..+ +..+.+.
T Consensus 270 I~~~d~dG~~~~~~----~~~~-----~~---~P--~giav~~~~ly~td---~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 270 IERANLDGSHRKAV----ISQG-----LP---HP--FAITVFEDSLYWTD---WHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEEECTTSCSCEEE----ECSS-----CS---SE--EEEEEETTEEEEEE---TTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEeCCCCeeEEE----EECC-----CC---Cc--eEEEEECCEEEEee---CCCCeEEEEECCCCcceEEEc
Confidence 55554333222111 1111 11 11 1122 466666653 3567899999544 4445543
No 125
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=23.07 E-value=5.1e+02 Score=24.94 Aligned_cols=192 Identities=10% Similarity=0.036 Sum_probs=92.3
Q ss_pred eeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC-ceEECcCC--
Q 017140 117 LYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN-SWRPLKGG-- 193 (376)
Q Consensus 117 ~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~-~W~~~~~~-- 193 (376)
..++++|..+++.. .+ ............+.+.+ ++.+.++...........+.+++..++ ..+.+...
T Consensus 235 ~~l~~~d~~~~~~~------~~--~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 235 VTVGIYHLATGKTV------YL--QTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp EEEEEEETTTTEEE------EC--CCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred eEEEEEECCCCceE------ee--ccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 47999999999877 55 32211112224555555 334434332221222346777888887 66554321
Q ss_pred CCccCCCcceEE----CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccc-eE-EeCC-eEEEEEcc
Q 017140 194 PNYYPQRESVCV----DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESE-LI-VYSG-RPAIADHL 266 (376)
Q Consensus 194 ~~~~~~~~~v~~----~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~-l~-~~~G-~L~l~~~~ 266 (376)
........++.+ +|.+.+....+. ...|..+|.++.....+...... ... +. .-+| .|++....
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~~-----v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEWE-----VTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSSC-----EEEEEEECTTSSEEEEEESS
T ss_pred CCeECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCeE-----EEeeeEEcCCCCEEEEEecC
Confidence 111101122222 788666554332 14788888776665555321110 111 11 2244 56555542
Q ss_pred CCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEe-ecccCCCcEEEEEeCCCCcE
Q 017140 267 LLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLV-PQTVSDSVYVIHYDVVNRSM 342 (376)
Q Consensus 267 ~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~-~~~~~~~~~l~~ydl~t~~~ 342 (376)
.......||..+-. ++... .+... .....+.. .+|+.++. .........++.+|+++++.
T Consensus 377 -~~~~~~~l~~~d~~-~~~~~----~l~~~----------~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 377 -ASPLERHFYCIDIK-GGKTK----DLTPE----------SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp -SCTTCBEEEEEETT-CCCCE----ESCCS----------SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred -CCCceEEEEEEEcC-CCCce----eccCC----------CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 12235677877532 22222 22211 01011222 56664443 33223346789999988873
No 126
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=23.07 E-value=3e+02 Score=22.29 Aligned_cols=195 Identities=10% Similarity=0.011 Sum_probs=89.2
Q ss_pred EecCCeeEEEEcCCC-CceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCCceEEC
Q 017140 112 LMDFGLYATLCNPST-RQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTNSWRPL 190 (376)
Q Consensus 112 ~~~~~~~~~V~NP~T-~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~ 190 (376)
...+. .++++|..+ ++.. .+ ...... ..+..+.+.+. +.+-++.. ........+.+++..++.-+.+
T Consensus 58 ~~~~~-~i~~~d~~~~~~~~------~~--~~~~~~-~~~~~~~~spd-g~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 58 LNSEG-LLYRLSLAGDPSPE------KV--DTGFAT-ICNNDHGISPD-GALYAISD-KVEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp EEETT-EEEEEESSSCCSCE------EC--CCTTCC-CBCSCCEECTT-SSEEEEEE-CTTTSSCEEEEEETTCCCCEEC
T ss_pred EEcCC-eEEEEeCCCCCCce------Ee--cccccc-ccccceEECCC-CCEEEEEE-eCCCCcceEEEEECCCCceEEe
Confidence 44455 899999999 8777 55 322111 11133444443 33333332 1111245666666666654444
Q ss_pred cCCCCccCCCcceEECce-EEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCCe-EEEEEccC
Q 017140 191 KGGPNYYPQRESVCVDGF-VYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSGR-PAIADHLL 267 (376)
Q Consensus 191 ~~~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G~-L~l~~~~~ 267 (376)
....... .....-+|. +++....+. ...|..+|..+.....+...... ...+. .-+|+ |++...
T Consensus 126 ~~~~~~~--~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~-- 192 (297)
T 2ojh_A 126 TKNLPSY--WHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEGR-----NDGPDYSPDGRWIYFNSS-- 192 (297)
T ss_dssp CSSSSEE--EEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSSC-----EEEEEECTTSSEEEEEEC--
T ss_pred ecCCCcc--ceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCCc-----cccceECCCCCEEEEEec--
Confidence 3322110 001111454 443443321 13577777776655444221111 11111 22555 444433
Q ss_pred CCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccC--------CCcEEEEEeCC
Q 017140 268 LEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVS--------DSVYVIHYDVV 338 (376)
Q Consensus 268 ~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~--------~~~~l~~ydl~ 338 (376)
....+.||.++..+ +... .+... . . ....+.. .+|+.++...... ....++.+|++
T Consensus 193 -~~~~~~i~~~~~~~-~~~~----~~~~~----~-~----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 193 -RTGQMQIWRVRVDG-SSVE----RITDS----A-Y----GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp -TTSSCEEEEEETTS-SCEE----ECCCC----S-E----EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred -CCCCccEEEECCCC-CCcE----EEecC----C-c----ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 35678899987332 2221 22111 0 0 1011222 5776554432111 12579999999
Q ss_pred CCcEEEEE
Q 017140 339 NRSMRRAE 346 (376)
Q Consensus 339 t~~~~~v~ 346 (376)
+++.+.+.
T Consensus 258 ~~~~~~~~ 265 (297)
T 2ojh_A 258 GGNVETLF 265 (297)
T ss_dssp SCSCEEEE
T ss_pred CCCceeee
Confidence 99877664
No 127
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=23.01 E-value=87 Score=26.05 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=23.8
Q ss_pred eEEEeecccCCCcEEEEEeCCCCcEEEEEEeccC
Q 017140 318 ELLLVPQTVSDSVYVIHYDVVNRSMRRAEIFGLP 351 (376)
Q Consensus 318 ~ill~~~~~~~~~~l~~ydl~t~~~~~v~~~~~~ 351 (376)
+|++.. ....|+.||.++++|.+.+++|.-
T Consensus 36 qIL~~t----~hasvYkfd~~~~eW~K~~~eG~L 65 (231)
T 1q67_A 36 QLLFHT----PHASLYKWDFKKDEWNKLEYQGVL 65 (231)
T ss_dssp EEEEEE----EEEEEEEEETTTTEEEEEEEEEEE
T ss_pred HHHhcC----CeEEEEEecCCCCceEecCcEEEE
Confidence 466643 345789999999999999999874
No 128
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=22.36 E-value=3.8e+02 Score=23.19 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=57.2
Q ss_pred eeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecC-CCCCcEEEEEeCCCceEECcCCCC
Q 017140 117 LYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIP-GRDPEYRIFELGTNSWRPLKGGPN 195 (376)
Q Consensus 117 ~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~-~~~~~~~vyss~~~~W~~~~~~~~ 195 (376)
..++++|..|++.. .+ -.... ....+.+.|.++...++...... .....+.+++..++..+.+.....
T Consensus 168 ~~l~~~d~~~g~~~------~l--~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 236 (388)
T 3pe7_A 168 CRLMRVDLKTGEST------VI--LQENQ---WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE 236 (388)
T ss_dssp EEEEEEETTTCCEE------EE--EEESS---CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT
T ss_pred ceEEEEECCCCceE------Ee--ecCCc---cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC
Confidence 37899999998877 66 22111 12344555522333222222111 124467777777666655543321
Q ss_pred ccC-CCcceEECce-EEEEEecCCCCCCccEEEEEEcCCcceEEE-ecCh
Q 017140 196 YYP-QRESVCVDGF-VYFRSWVSTHKNGRTVLIAFDLHEESFRVI-EIPA 242 (376)
Q Consensus 196 ~~~-~~~~v~~~G~-lyw~~~~~~~~~~~~~il~fD~~~~~~~~i-~lP~ 242 (376)
... ......-+|. +++......... ..|..+|+++.+...+ .+|.
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~--~~l~~~d~~~g~~~~l~~~~~ 284 (388)
T 3pe7_A 237 GESCTHEFWVPDGSALVYVSYLKGSPD--RFIYSADPETLENRQLTSMPA 284 (388)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTCCC--EEEEEECTTTCCEEEEEEECC
T ss_pred CcccccceECCCCCEEEEEecCCCCCc--ceEEEEecCCCceEEEEcCCC
Confidence 100 1111112565 666665433211 2599999998876554 4443
No 129
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=21.84 E-value=76 Score=21.07 Aligned_cols=19 Identities=5% Similarity=0.226 Sum_probs=15.3
Q ss_pred CCcEEEEEeCCCCcEEEEE
Q 017140 328 DSVYVIHYDVVNRSMRRAE 346 (376)
Q Consensus 328 ~~~~l~~ydl~t~~~~~v~ 346 (376)
..-++|.||.++++++-+.
T Consensus 38 g~iKIykyde~tNeI~LkK 56 (72)
T 3kvp_A 38 GYIKIYEYNESRNEVKLKK 56 (72)
T ss_dssp TEEEEEEEETTTTEEEEEE
T ss_pred CEEEEEEeCCCCCeEEEEE
Confidence 3457899999999988763
No 130
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=21.15 E-value=4e+02 Score=22.94 Aligned_cols=141 Identities=13% Similarity=0.106 Sum_probs=76.2
Q ss_pred cEEEEEeCCCce-EECcCCCCccCCCcce-EECceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccc
Q 017140 176 EYRIFELGTNSW-RPLKGGPNYYPQRESV-CVDGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESE 252 (376)
Q Consensus 176 ~~~vyss~~~~W-~~~~~~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~ 252 (376)
.+.+++.++++= +.+ .+.. ....++ ..++.+|-+++... .+.+||.++.+- ..++.+.. ..-
T Consensus 76 ~v~~iD~~Tgkv~~~~--l~~~-~FgeGit~~g~~Ly~ltw~~~------~v~V~D~~Tl~~~~ti~~~~e------GwG 140 (268)
T 3nok_A 76 TLRQLSLESAQPVWME--RLGN-IFAEGLASDGERLYQLTWTEG------LLFTWSGMPPQRERTTRYSGE------GWG 140 (268)
T ss_dssp EEEECCSSCSSCSEEE--ECTT-CCEEEEEECSSCEEEEESSSC------EEEEEETTTTEEEEEEECSSC------CCC
T ss_pred EEEEEECCCCcEEeEE--CCCC-cceeEEEEeCCEEEEEEccCC------EEEEEECCcCcEEEEEeCCCc------eeE
Confidence 378888888742 122 1111 122333 44567888877653 899999987544 56776532 223
Q ss_pred eEEeCCeEEEEEccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee-cCCeEEEeecccCCCcE
Q 017140 253 LIVYSGRPAIADHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG-RNNELLLVPQTVSDSVY 331 (376)
Q Consensus 253 l~~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~-~~g~ill~~~~~~~~~~ 331 (376)
|..-+++|++... .. .|+.++-. +..=.. .+.+... .. .+. . +.-+. .+|+|+.-. .....
T Consensus 141 Lt~Dg~~L~vSdG----s~--~l~~iDp~-T~~v~~-~I~V~~~-g~-~v~----~-lNeLe~~dG~lyanv---w~s~~ 202 (268)
T 3nok_A 141 LCYWNGKLVRSDG----GT--MLTFHEPD-GFALVG-AVQVKLR-GQ-PVE----L-INELECANGVIYANI---WHSSD 202 (268)
T ss_dssp EEEETTEEEEECS----SS--EEEEECTT-TCCEEE-EEECEET-TE-ECC----C-EEEEEEETTEEEEEE---TTCSE
T ss_pred EecCCCEEEEECC----CC--EEEEEcCC-CCeEEE-EEEeCCC-Cc-ccc----c-ccccEEeCCEEEEEE---CCCCe
Confidence 4455667777643 12 57777522 221111 2333211 00 011 1 21122 478776543 34668
Q ss_pred EEEEeCCCCcE-EEEEEec
Q 017140 332 VIHYDVVNRSM-RRAEIFG 349 (376)
Q Consensus 332 l~~ydl~t~~~-~~v~~~~ 349 (376)
+...|++++++ ++|...+
T Consensus 203 I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp EEEECTTTCBEEEEEECHH
T ss_pred EEEEeCCCCcEEEEEECCC
Confidence 99999999986 5566553
No 131
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=20.60 E-value=3.9e+02 Score=22.65 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=56.7
Q ss_pred CceEEEEEecCCCCCCccEEEEEEcCCcceEEEecChhhhccCCccceE-EeCCeEEEEEccCCCCCeEEEEEeccCCCC
Q 017140 206 DGFVYFRSWVSTHKNGRTVLIAFDLHEESFRVIEIPAKALARRSESELI-VYSGRPAIADHLLLEDATMTIWVLDENDGD 284 (376)
Q Consensus 206 ~G~lyw~~~~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~~l~-~~~G~L~l~~~~~~~~~~l~IW~l~~~~~~ 284 (376)
+|.+||..... ..|..+|.++..-..+..+.... -+. .-+|+|+++.. ......|+.++.. .+
T Consensus 42 ~g~lyv~d~~~------~~I~~~d~~g~~~~~~~~~~~p~------gia~~~dG~l~vad~---~~~~~~v~~~d~~-~g 105 (306)
T 2p4o_A 42 DGTIFVTNHEV------GEIVSITPDGNQQIHATVEGKVS------GLAFTSNGDLVATGW---NADSIPVVSLVKS-DG 105 (306)
T ss_dssp TSCEEEEETTT------TEEEEECTTCCEEEEEECSSEEE------EEEECTTSCEEEEEE---CTTSCEEEEEECT-TS
T ss_pred CCCEEEEeCCC------CeEEEECCCCceEEEEeCCCCce------eEEEcCCCcEEEEec---cCCcceEEEEcCC-CC
Confidence 68899987543 38999999876544455543221 122 33688888775 3233456665422 33
Q ss_pred CeEEEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcE
Q 017140 285 YWVQIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSM 342 (376)
Q Consensus 285 ~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~ 342 (376)
..+.+ ..++.. . +.. . . ....++.+++.. .....++.+|+.+++.
T Consensus 106 ~~~~~-~~~~~~-~--~~~----g-~-~~~~~~~~~v~d---~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 106 TVETL-LTLPDA-I--FLN----G-I-TPLSDTQYLTAD---SYRGAIWLIDVVQPSG 150 (306)
T ss_dssp CEEEE-EECTTC-S--CEE----E-E-EESSSSEEEEEE---TTTTEEEEEETTTTEE
T ss_pred eEEEE-EeCCCc-c--ccC----c-c-cccCCCcEEEEE---CCCCeEEEEeCCCCcE
Confidence 44433 233321 0 111 1 1 111344444432 1356889999887643
No 132
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=20.52 E-value=4e+02 Score=22.75 Aligned_cols=52 Identities=12% Similarity=0.259 Sum_probs=24.6
Q ss_pred EEEEEEcCCcceEEE-ec-ChhhhccCCccceE--Ee-CCeEEEEEccCCCCCeEEEEEecc
Q 017140 224 VLIAFDLHEESFRVI-EI-PAKALARRSESELI--VY-SGRPAIADHLLLEDATMTIWVLDE 280 (376)
Q Consensus 224 ~il~fD~~~~~~~~i-~l-P~~~~~~~~~~~l~--~~-~G~L~l~~~~~~~~~~l~IW~l~~ 280 (376)
.|..+|..+..|..+ .. ..... .....+. .. +|.+.+... .+..+.||.++.
T Consensus 272 ~v~iw~~~~~~~~~~~~~~~~h~~--~~v~~v~~~~~~~~~~las~s---~Dg~v~~W~~~~ 328 (330)
T 2hes_X 272 VLAVYEEVDGEWKVFAKRALCHGV--YEINVVKWLELNGKTILATGG---DDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEEEETTEEEEEEEESCTTTT--SCEEEEEEC-----CCEEEEE---TTSEEEEEEC--
T ss_pred EEEEEEcCCCceEEEecccccccc--ceEEEEEEecCCCceEEEEec---CCCcEEEEEecc
Confidence 677888877766544 22 11110 0011111 11 355544444 678899998764
No 133
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=20.44 E-value=6.1e+02 Score=24.79 Aligned_cols=179 Identities=12% Similarity=0.120 Sum_probs=86.0
Q ss_pred ecCCeeEEEEcCCCCceeeCCCceeecCCCCCCccceeEEEeEeCCCCcEEEEEEeecCCCCCcEEEEEeCCC-ceEECc
Q 017140 113 MDFGLYATLCNPSTRQTFNTPFVCSLTSPSVNSTYFCVNSFGFDPVSKKYKVLNSWAIPGRDPEYRIFELGTN-SWRPLK 191 (376)
Q Consensus 113 ~~~~~~~~V~NP~T~~~~~~p~~~~L~~P~~~~~~~~~~~l~~d~~~~~ykvv~~~~~~~~~~~~~vyss~~~-~W~~~~ 191 (376)
..++ .+.|+|..+++... .+ .... ..+..+.+.+. +.+-+.+ .. ...+.+|+..++ .....-
T Consensus 74 ~~dg-~i~vw~~~~~~~~~-----~~--~~~~---~~v~~~~~s~~-~~~l~~~-~~----dg~i~vw~~~~~~~~~~~~ 136 (814)
T 3mkq_A 74 SDDF-RIRVFNYNTGEKVV-----DF--EAHP---DYIRSIAVHPT-KPYVLSG-SD----DLTVKLWNWENNWALEQTF 136 (814)
T ss_dssp ETTS-EEEEEETTTCCEEE-----EE--ECCS---SCEEEEEECSS-SSEEEEE-ET----TSEEEEEEGGGTSEEEEEE
T ss_pred eCCC-eEEEEECCCCcEEE-----EE--ecCC---CCEEEEEEeCC-CCEEEEE-cC----CCEEEEEECCCCceEEEEE
Confidence 3455 89999999988761 23 2111 22355556553 3332222 22 447888888765 222111
Q ss_pred CCCCccCCCcceEE---CceEEEEEecCCCCCCccEEEEEEcCCcce-EEEecChhhhccCCccceEEe----CCeEEEE
Q 017140 192 GGPNYYPQRESVCV---DGFVYFRSWVSTHKNGRTVLIAFDLHEESF-RVIEIPAKALARRSESELIVY----SGRPAIA 263 (376)
Q Consensus 192 ~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~~l~~~----~G~L~l~ 263 (376)
... ...-.++.+ +|.....+..+ ..|..+|+.+..- ..+..+... ....+.. +|.+.++
T Consensus 137 ~~~--~~~v~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~ 203 (814)
T 3mkq_A 137 EGH--EHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMIT 203 (814)
T ss_dssp ECC--SSCEEEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTTCCEEEE
T ss_pred cCC--CCcEEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCCCCEEEE
Confidence 110 001112222 34444444443 2788999865443 223322211 1112222 5666555
Q ss_pred EccCCCCCeEEEEEeccCCCCCeEEEEEEcCCCcccccccccccceeEEee--cCCeEEEeecccCCCcEEEEEeCCCCc
Q 017140 264 DHLLLEDATMTIWVLDENDGDYWVQIKVFLPEDYGEEILEEDIDYFVDCIG--RNNELLLVPQTVSDSVYVIHYDVVNRS 341 (376)
Q Consensus 264 ~~~~~~~~~l~IW~l~~~~~~~W~~~~~~lp~~~~~~~~~~~~~~~~~~~~--~~g~ill~~~~~~~~~~l~~ydl~t~~ 341 (376)
.. ....+.+|.+.. + ..+. .+.... .. +..+. .+|.+++.. ..+..+..||+.+++
T Consensus 204 ~~---~dg~i~~~d~~~---~--~~~~-~~~~~~---------~~-v~~~~~~~~~~~l~~~---~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 204 AS---DDLTIKIWDYQT---K--SCVA-TLEGHM---------SN-VSFAVFHPTLPIIISG---SEDGTLKIWNSSTYK 261 (814)
T ss_dssp EC---TTSEEEEEETTT---T--EEEE-EEECCS---------SC-EEEEEECSSSSEEEEE---ETTSCEEEEETTTCS
T ss_pred Ee---CCCEEEEEECCC---C--cEEE-EEcCCC---------CC-EEEEEEcCCCCEEEEE---eCCCeEEEEECCCCc
Confidence 55 567899998753 1 1221 111110 11 22222 566666553 245667888887766
Q ss_pred EE
Q 017140 342 MR 343 (376)
Q Consensus 342 ~~ 343 (376)
..
T Consensus 262 ~~ 263 (814)
T 3mkq_A 262 VE 263 (814)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 134
>3u6x_S ORF48; helix/beta, receptor binding complex, phage tail baseplate, protein; 2.60A {Lactococcus phage tp901-1}
Probab=20.03 E-value=2.3e+02 Score=19.64 Aligned_cols=44 Identities=14% Similarity=0.367 Sum_probs=28.1
Q ss_pred EEEEEcCCCcccccccccccceeEEeecCCeEEEeecccCCCcEEEEEeCCCCcEEE
Q 017140 288 QIKVFLPEDYGEEILEEDIDYFVDCIGRNNELLLVPQTVSDSVYVIHYDVVNRSMRR 344 (376)
Q Consensus 288 ~~~~~lp~~~~~~~~~~~~~~~~~~~~~~g~ill~~~~~~~~~~l~~ydl~t~~~~~ 344 (376)
++.+.+|..|. ..+ . +. +..++.++++ +..++++|+.+.-++.+
T Consensus 56 kv~vemp~~y~--lag----e-v~-~~~~~~ll~i-----n~tqvl~f~m~~a~itk 99 (105)
T 3u6x_S 56 KVYVEMPKSYT--LAG----D-II-LIDDGTLLVI-----KETQVLCFKMSDAKITK 99 (105)
T ss_dssp EEEEECCGGGC--CCS----E-EE-EETTTEEEEE-----ETTEEEEEEESSSCEEE
T ss_pred eEEEecchhee--ecc----e-EE-EecCCEEEEE-----cCCEEEEEEeeCCEEee
Confidence 44567776543 233 2 22 2257777776 57789999998888765
Done!