Query 017143
Match_columns 376
No_of_seqs 132 out of 1558
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 09:38:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h3v_A Oxidoreductase domain p 100.0 1.7E-62 5.8E-67 466.4 32.1 354 3-365 3-390 (390)
2 4gqa_A NAD binding oxidoreduct 100.0 8.3E-62 2.8E-66 464.3 34.0 353 3-365 23-411 (412)
3 4had_A Probable oxidoreductase 100.0 5.3E-62 1.8E-66 456.2 29.4 327 4-363 21-350 (350)
4 4fb5_A Probable oxidoreductase 100.0 3E-61 1E-65 458.3 33.4 353 1-363 20-392 (393)
5 3e18_A Oxidoreductase; dehydro 100.0 5.8E-58 2E-62 429.3 35.5 338 1-366 1-353 (359)
6 3db2_A Putative NADPH-dependen 100.0 8.1E-58 2.8E-62 428.2 35.7 340 4-368 3-354 (354)
7 3fhl_A Putative oxidoreductase 100.0 5.7E-58 1.9E-62 430.2 30.8 340 1-367 1-357 (362)
8 3ip3_A Oxidoreductase, putativ 100.0 6.9E-58 2.4E-62 425.7 29.5 325 6-366 2-332 (337)
9 3q2i_A Dehydrogenase; rossmann 100.0 2.5E-57 8.4E-62 424.9 33.0 340 2-364 9-351 (354)
10 1zh8_A Oxidoreductase; TM0312, 100.0 6.3E-57 2.1E-61 419.4 33.7 324 1-367 13-340 (340)
11 3oqb_A Oxidoreductase; structu 100.0 4.4E-57 1.5E-61 427.8 33.0 352 4-367 4-383 (383)
12 3dty_A Oxidoreductase, GFO/IDH 100.0 1.7E-56 5.9E-61 425.2 36.3 344 3-365 9-391 (398)
13 3evn_A Oxidoreductase, GFO/IDH 100.0 1.5E-56 5E-61 415.4 34.0 322 1-360 1-324 (329)
14 3e9m_A Oxidoreductase, GFO/IDH 100.0 2.8E-56 9.6E-61 413.5 35.7 323 1-363 1-327 (330)
15 3ec7_A Putative dehydrogenase; 100.0 6.9E-57 2.4E-61 421.7 31.5 327 2-364 19-348 (357)
16 3kux_A Putative oxidoreductase 100.0 3.5E-56 1.2E-60 416.7 36.0 334 4-365 5-350 (352)
17 3v5n_A Oxidoreductase; structu 100.0 1.6E-56 5.5E-61 427.3 34.2 340 4-363 35-417 (417)
18 3rc1_A Sugar 3-ketoreductase; 100.0 8.9E-57 3.1E-61 419.8 30.4 323 2-357 23-346 (350)
19 3mz0_A Inositol 2-dehydrogenas 100.0 2E-56 6.8E-61 417.2 30.8 324 6-364 2-328 (344)
20 3u3x_A Oxidoreductase; structu 100.0 5.6E-56 1.9E-60 416.0 33.8 323 3-360 23-359 (361)
21 3ezy_A Dehydrogenase; structur 100.0 1.3E-56 4.4E-61 418.5 28.2 335 6-369 2-337 (344)
22 3gdo_A Uncharacterized oxidore 100.0 4.6E-56 1.6E-60 416.5 31.9 337 1-366 1-351 (358)
23 3e82_A Putative oxidoreductase 100.0 8.2E-56 2.8E-60 415.5 33.6 336 1-364 1-346 (364)
24 3ohs_X Trans-1,2-dihydrobenzen 100.0 3.5E-55 1.2E-59 407.1 33.7 324 6-357 2-327 (334)
25 1h6d_A Precursor form of gluco 100.0 2.8E-55 9.6E-60 420.2 33.4 340 2-367 79-427 (433)
26 3euw_A MYO-inositol dehydrogen 100.0 4.7E-56 1.6E-60 414.8 27.2 336 5-370 3-339 (344)
27 4hkt_A Inositol 2-dehydrogenas 100.0 1.2E-55 4.2E-60 409.8 29.8 327 6-363 3-330 (331)
28 3i23_A Oxidoreductase, GFO/IDH 100.0 1.7E-55 5.8E-60 411.4 26.9 327 6-360 2-344 (349)
29 3m2t_A Probable dehydrogenase; 100.0 1E-55 3.4E-60 414.1 24.9 333 1-363 1-338 (359)
30 2nvw_A Galactose/lactose metab 100.0 8.2E-54 2.8E-58 413.9 34.0 358 1-367 34-478 (479)
31 3btv_A Galactose/lactose metab 100.0 7.6E-54 2.6E-58 411.1 31.8 353 5-367 19-434 (438)
32 3moi_A Probable dehydrogenase; 100.0 3.3E-54 1.1E-58 408.0 28.2 336 5-362 1-386 (387)
33 2glx_A 1,5-anhydro-D-fructose 100.0 1E-52 3.5E-57 390.6 36.0 323 7-365 1-330 (332)
34 2p2s_A Putative oxidoreductase 100.0 4.2E-53 1.4E-57 393.5 32.3 328 4-358 2-335 (336)
35 3cea_A MYO-inositol 2-dehydrog 100.0 4.5E-53 1.5E-57 395.2 30.9 336 1-364 3-345 (346)
36 3f4l_A Putative oxidoreductase 100.0 1.4E-53 4.8E-58 397.9 23.7 327 6-361 2-342 (345)
37 2ixa_A Alpha-N-acetylgalactosa 100.0 1.8E-52 6.2E-57 402.6 21.3 359 3-370 17-430 (444)
38 1ydw_A AX110P-like protein; st 100.0 9.5E-52 3.3E-56 388.2 25.1 339 3-364 3-360 (362)
39 2ho3_A Oxidoreductase, GFO/IDH 100.0 7.4E-49 2.5E-53 363.3 31.0 310 6-357 1-319 (325)
40 3uuw_A Putative oxidoreductase 100.0 2.8E-49 9.4E-54 363.4 27.2 305 3-356 3-308 (308)
41 3oa2_A WBPB; oxidoreductase, s 100.0 1.5E-49 5.2E-54 365.6 20.2 290 5-356 2-301 (318)
42 3c1a_A Putative oxidoreductase 100.0 2.4E-48 8.2E-53 358.2 24.8 307 3-351 7-314 (315)
43 4ew6_A D-galactose-1-dehydroge 100.0 4.4E-48 1.5E-52 357.8 25.3 278 2-328 21-300 (330)
44 1xea_A Oxidoreductase, GFO/IDH 100.0 6.4E-48 2.2E-52 356.6 24.4 306 6-358 2-309 (323)
45 1tlt_A Putative oxidoreductase 100.0 8.3E-47 2.8E-51 348.6 25.4 310 1-360 1-311 (319)
46 3o9z_A Lipopolysaccaride biosy 100.0 3.2E-47 1.1E-51 349.2 19.0 291 5-358 2-301 (312)
47 1lc0_A Biliverdin reductase A; 100.0 4.5E-41 1.5E-45 305.9 24.3 286 1-359 1-294 (294)
48 4gmf_A Yersiniabactin biosynth 100.0 4.1E-31 1.4E-35 246.2 26.1 151 1-165 1-159 (372)
49 3bio_A Oxidoreductase, GFO/IDH 100.0 7.2E-31 2.5E-35 239.4 -0.6 229 1-254 4-242 (304)
50 3mtj_A Homoserine dehydrogenas 99.9 5.5E-23 1.9E-27 194.0 10.0 149 2-161 6-163 (444)
51 3upl_A Oxidoreductase; rossman 99.8 1.2E-20 3.9E-25 177.4 11.8 139 4-152 21-181 (446)
52 3do5_A HOM, homoserine dehydro 99.8 7.8E-21 2.7E-25 173.4 8.4 150 6-162 2-169 (327)
53 1f06_A MESO-diaminopimelate D- 99.8 1.9E-20 6.6E-25 171.7 8.0 131 4-152 1-132 (320)
54 3c8m_A Homoserine dehydrogenas 99.8 5.8E-20 2E-24 168.6 9.0 150 4-161 4-174 (331)
55 1ebf_A Homoserine dehydrogenas 99.8 3E-19 1E-23 165.1 7.0 146 4-161 2-171 (358)
56 3a06_A 1-deoxy-D-xylulose 5-ph 99.8 5.5E-18 1.9E-22 152.8 12.4 206 6-249 3-247 (376)
57 2czc_A Glyceraldehyde-3-phosph 99.7 1.5E-19 5E-24 166.5 1.8 146 6-163 2-170 (334)
58 1r0k_A 1-deoxy-D-xylulose 5-ph 99.7 3.8E-17 1.3E-21 150.4 15.1 211 6-249 4-259 (388)
59 2ejw_A HDH, homoserine dehydro 99.7 1.6E-18 5.5E-23 158.2 5.8 189 5-215 2-218 (332)
60 3ing_A Homoserine dehydrogenas 99.7 2.3E-17 7.7E-22 150.3 11.3 153 4-161 2-170 (325)
61 1nvm_B Acetaldehyde dehydrogen 99.7 8.8E-17 3E-21 146.0 8.0 100 5-111 3-108 (312)
62 2dc1_A L-aspartate dehydrogena 99.7 3.2E-16 1.1E-20 137.5 10.4 112 7-139 1-113 (236)
63 1dih_A Dihydrodipicolinate red 99.5 3.5E-15 1.2E-19 132.9 6.2 151 1-163 1-158 (273)
64 2nu8_A Succinyl-COA ligase [AD 99.5 4.2E-13 1.4E-17 120.6 16.9 182 4-212 5-204 (288)
65 2dt5_A AT-rich DNA-binding pro 99.4 6.2E-14 2.1E-18 119.5 1.0 101 5-115 79-180 (211)
66 1ff9_A Saccharopine reductase; 99.3 2.1E-12 7.2E-17 123.4 8.2 189 6-213 3-201 (450)
67 3ijp_A DHPR, dihydrodipicolina 99.3 8.8E-12 3E-16 110.7 10.9 148 2-163 17-174 (288)
68 4f3y_A DHPR, dihydrodipicolina 99.3 6.1E-12 2.1E-16 111.5 9.6 146 4-163 5-159 (272)
69 3qy9_A DHPR, dihydrodipicolina 99.3 1E-11 3.5E-16 108.1 9.4 130 6-163 3-134 (243)
70 2vt3_A REX, redox-sensing tran 99.2 1.7E-12 6E-17 110.8 0.8 102 5-116 84-186 (215)
71 2ahr_A Putative pyrroline carb 99.2 1.6E-10 5.4E-15 102.6 13.1 101 5-120 2-102 (259)
72 2z2v_A Hypothetical protein PH 99.2 3E-11 1E-15 112.2 7.5 141 5-166 15-160 (365)
73 1p9l_A Dihydrodipicolinate red 99.1 1.8E-09 6.3E-14 94.0 17.0 128 7-163 1-131 (245)
74 1u8f_O GAPDH, glyceraldehyde-3 99.1 2.2E-10 7.5E-15 104.8 9.3 96 6-108 3-124 (335)
75 1cf2_P Protein (glyceraldehyde 99.1 3.5E-10 1.2E-14 103.7 9.7 95 6-109 1-111 (337)
76 4ina_A Saccharopine dehydrogen 99.1 3.9E-10 1.3E-14 106.4 10.2 148 7-164 2-168 (405)
77 3e5r_O PP38, glyceraldehyde-3- 99.0 4.6E-10 1.6E-14 102.5 7.9 100 6-109 3-127 (337)
78 1b7g_O Protein (glyceraldehyde 99.0 2.8E-09 9.7E-14 97.8 11.0 90 6-106 1-107 (340)
79 3abi_A Putative uncharacterize 98.9 1.6E-09 5.4E-14 101.0 8.9 133 5-152 15-149 (365)
80 2yv1_A Succinyl-COA ligase [AD 98.9 1.7E-08 5.8E-13 90.7 15.2 113 5-132 12-125 (294)
81 1oi7_A Succinyl-COA synthetase 98.9 5.4E-08 1.8E-12 87.1 16.5 114 4-132 5-119 (288)
82 2yyy_A Glyceraldehyde-3-phosph 98.8 1.2E-08 4.1E-13 93.5 9.5 96 6-110 2-116 (343)
83 2yv2_A Succinyl-COA synthetase 98.8 2.2E-07 7.7E-12 83.5 17.0 112 5-132 12-126 (297)
84 2axq_A Saccharopine dehydrogen 98.8 3.9E-08 1.3E-12 94.1 12.1 145 5-163 22-173 (467)
85 1y81_A Conserved hypothetical 98.8 8.8E-09 3E-13 81.7 6.4 104 5-132 13-120 (138)
86 1omo_A Alanine dehydrogenase; 98.7 1.5E-08 5.3E-13 92.4 7.5 100 5-116 124-226 (322)
87 4huj_A Uncharacterized protein 98.7 3E-08 1E-12 85.5 7.3 94 5-109 22-116 (220)
88 2fp4_A Succinyl-COA ligase [GD 98.7 6.6E-07 2.3E-11 80.6 16.1 115 6-136 13-130 (305)
89 1x7d_A Ornithine cyclodeaminas 98.7 2E-08 6.8E-13 92.5 6.2 102 5-115 128-234 (350)
90 3cky_A 2-hydroxymethyl glutara 98.7 1.8E-07 6.1E-12 84.6 11.9 111 5-132 3-120 (301)
91 3oj0_A Glutr, glutamyl-tRNA re 98.6 1.7E-08 5.7E-13 81.0 4.4 87 6-104 21-107 (144)
92 2duw_A Putative COA-binding pr 98.6 2.7E-08 9.3E-13 79.7 4.7 113 6-141 13-131 (145)
93 3pef_A 6-phosphogluconate dehy 98.6 2.6E-07 9E-12 83.0 11.7 109 7-132 2-117 (287)
94 3d1l_A Putative NADP oxidoredu 98.6 9E-08 3.1E-12 85.0 8.5 81 6-96 10-90 (266)
95 2ep5_A 350AA long hypothetical 98.6 3.7E-08 1.3E-12 90.9 6.0 91 4-105 2-106 (350)
96 2d59_A Hypothetical protein PH 98.6 7.3E-08 2.5E-12 77.1 7.0 103 6-132 22-128 (144)
97 4dll_A 2-hydroxy-3-oxopropiona 98.6 5.3E-07 1.8E-11 82.2 13.0 112 5-133 30-147 (320)
98 3qsg_A NAD-binding phosphogluc 98.6 6.5E-07 2.2E-11 81.4 13.5 110 4-125 22-133 (312)
99 1j5p_A Aspartate dehydrogenase 98.6 1.2E-07 4.3E-12 82.1 7.9 129 6-164 12-141 (253)
100 3tri_A Pyrroline-5-carboxylate 98.6 3.3E-07 1.1E-11 81.9 11.1 100 5-115 2-105 (280)
101 3ic5_A Putative saccharopine d 98.6 6.7E-07 2.3E-11 68.5 11.2 106 5-124 4-114 (118)
102 4e21_A 6-phosphogluconate dehy 98.6 8.2E-07 2.8E-11 82.0 13.5 114 5-132 21-137 (358)
103 1vpd_A Tartronate semialdehyde 98.5 8.6E-07 2.9E-11 80.0 12.9 110 6-132 5-121 (299)
104 1yb4_A Tartronic semialdehyde 98.5 3.4E-07 1.2E-11 82.5 10.0 109 6-132 3-118 (295)
105 3gt0_A Pyrroline-5-carboxylate 98.5 4.8E-07 1.7E-11 79.3 10.6 99 6-116 2-105 (247)
106 2gf2_A Hibadh, 3-hydroxyisobut 98.5 6.7E-07 2.3E-11 80.6 11.8 110 7-134 1-117 (296)
107 2h78_A Hibadh, 3-hydroxyisobut 98.5 8.2E-07 2.8E-11 80.3 11.9 110 6-132 3-119 (302)
108 2ozp_A N-acetyl-gamma-glutamyl 98.5 1.8E-07 6E-12 86.1 7.4 146 5-163 3-177 (345)
109 3doj_A AT3G25530, dehydrogenas 98.5 9.6E-07 3.3E-11 80.2 12.2 112 4-132 19-137 (310)
110 1bg6_A N-(1-D-carboxylethyl)-L 98.5 8.6E-07 2.9E-11 82.1 11.6 93 4-107 2-109 (359)
111 2d5c_A AROE, shikimate 5-dehyd 98.5 9.8E-08 3.3E-12 84.7 5.0 117 8-144 118-238 (263)
112 3keo_A Redox-sensing transcrip 98.5 1.1E-07 3.8E-12 80.4 4.6 103 5-113 83-186 (212)
113 3l6d_A Putative oxidoreductase 98.5 1.4E-06 4.7E-11 79.0 12.2 113 5-134 8-125 (306)
114 3b1f_A Putative prephenate deh 98.4 1.5E-06 5.1E-11 78.1 11.8 122 4-135 4-126 (290)
115 2iz1_A 6-phosphogluconate dehy 98.4 2.5E-06 8.6E-11 82.0 13.6 114 5-132 4-125 (474)
116 3g0o_A 3-hydroxyisobutyrate de 98.4 2E-06 6.7E-11 77.8 11.9 111 5-132 6-124 (303)
117 2i99_A MU-crystallin homolog; 98.4 4.2E-07 1.4E-11 82.6 7.4 114 5-134 134-248 (312)
118 3qha_A Putative oxidoreductase 98.4 1.7E-06 5.7E-11 78.1 11.2 111 6-132 15-127 (296)
119 3obb_A Probable 3-hydroxyisobu 98.4 5.2E-06 1.8E-10 74.8 13.9 113 6-135 3-122 (300)
120 2i76_A Hypothetical protein; N 98.4 1.4E-07 4.7E-12 84.3 3.1 77 6-94 2-78 (276)
121 1xyg_A Putative N-acetyl-gamma 98.3 6.7E-07 2.3E-11 82.6 7.4 144 4-163 14-191 (359)
122 4ezb_A Uncharacterized conserv 98.3 8.1E-06 2.8E-10 74.2 14.1 114 6-132 24-143 (317)
123 4gbj_A 6-phosphogluconate dehy 98.3 2.1E-06 7.2E-11 77.3 10.0 114 7-137 6-124 (297)
124 1ys4_A Aspartate-semialdehyde 98.3 4.3E-07 1.5E-11 83.9 5.3 147 6-163 8-183 (354)
125 1i36_A Conserved hypothetical 98.3 6.1E-06 2.1E-10 73.0 12.6 104 7-128 1-106 (264)
126 3pdu_A 3-hydroxyisobutyrate de 98.3 3.4E-06 1.2E-10 75.6 10.4 110 7-133 2-118 (287)
127 3nkl_A UDP-D-quinovosamine 4-d 98.3 1.8E-06 6.2E-11 68.6 7.2 93 4-105 2-97 (141)
128 2uyy_A N-PAC protein; long-cha 98.2 6.5E-06 2.2E-10 74.8 11.5 111 6-133 30-147 (316)
129 3ggo_A Prephenate dehydrogenas 98.2 1.1E-05 3.8E-10 73.2 12.2 106 6-123 33-142 (314)
130 2cvz_A Dehydrogenase, 3-hydrox 98.2 6.1E-06 2.1E-10 73.9 10.0 107 7-132 2-112 (289)
131 4gwg_A 6-phosphogluconate dehy 98.2 2.3E-05 7.8E-10 75.0 14.3 115 5-131 3-124 (484)
132 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.2 1.8E-05 6E-10 76.1 13.5 113 7-131 2-124 (478)
133 1yqg_A Pyrroline-5-carboxylate 98.2 4.5E-06 1.5E-10 73.8 8.5 99 7-123 1-100 (263)
134 2f1k_A Prephenate dehydrogenas 98.2 1.4E-05 4.9E-10 71.1 11.8 103 7-122 1-104 (279)
135 3hdj_A Probable ornithine cycl 98.1 2.5E-06 8.6E-11 77.2 6.3 92 5-106 120-212 (313)
136 2hk9_A Shikimate dehydrogenase 98.1 2.3E-06 7.9E-11 76.2 5.8 121 6-146 129-253 (275)
137 2zyd_A 6-phosphogluconate dehy 98.1 3E-05 1E-09 74.4 13.9 117 4-132 13-135 (480)
138 2pgd_A 6-phosphogluconate dehy 98.1 2.6E-05 9E-10 75.0 13.5 113 6-132 2-123 (482)
139 1np3_A Ketol-acid reductoisome 98.1 4.7E-06 1.6E-10 76.5 7.6 133 6-163 16-152 (338)
140 3gg2_A Sugar dehydrogenase, UD 98.1 1.9E-05 6.4E-10 75.3 11.6 71 7-86 3-90 (450)
141 3dtt_A NADP oxidoreductase; st 98.1 6.7E-06 2.3E-10 71.9 7.8 82 5-94 18-110 (245)
142 1iuk_A Hypothetical protein TT 98.0 1.2E-06 4.3E-11 69.4 2.0 115 6-142 13-132 (140)
143 2o3j_A UDP-glucose 6-dehydroge 98.0 4E-05 1.4E-09 73.7 12.4 76 4-87 7-99 (481)
144 3c24_A Putative oxidoreductase 98.0 2.5E-05 8.4E-10 69.9 9.7 76 6-94 11-87 (286)
145 4dpl_A Malonyl-COA/succinyl-CO 98.0 8.2E-06 2.8E-10 75.1 6.7 141 1-152 1-168 (359)
146 4dpk_A Malonyl-COA/succinyl-CO 98.0 8.2E-06 2.8E-10 75.1 6.7 141 1-152 1-168 (359)
147 2g5c_A Prephenate dehydrogenas 98.0 2.1E-05 7.1E-10 70.2 9.1 104 7-123 2-110 (281)
148 2q3e_A UDP-glucose 6-dehydroge 98.0 7.4E-05 2.5E-09 71.6 13.5 76 6-87 5-95 (467)
149 2rcy_A Pyrroline carboxylate r 98.0 1.5E-05 5.2E-10 70.3 7.5 74 5-95 3-79 (262)
150 2izz_A Pyrroline-5-carboxylate 97.9 5.5E-05 1.9E-09 68.9 11.3 80 5-94 21-104 (322)
151 2y1e_A 1-deoxy-D-xylulose 5-ph 97.9 0.00034 1.2E-08 63.3 15.6 210 6-248 21-268 (398)
152 4e12_A Diketoreductase; oxidor 97.9 0.0001 3.5E-09 65.7 11.9 105 5-115 3-128 (283)
153 2p4q_A 6-phosphogluconate dehy 97.9 0.00016 5.5E-09 69.6 14.0 114 6-131 10-130 (497)
154 2x5j_O E4PDH, D-erythrose-4-ph 97.9 2.2E-05 7.4E-10 71.6 7.4 98 6-109 2-126 (339)
155 3pid_A UDP-glucose 6-dehydroge 97.9 9.9E-05 3.4E-09 69.4 12.0 133 6-156 36-216 (432)
156 1mv8_A GMD, GDP-mannose 6-dehy 97.9 5.4E-05 1.9E-09 71.9 10.4 71 7-87 1-89 (436)
157 2dpo_A L-gulonate 3-dehydrogen 97.9 8.1E-05 2.8E-09 67.5 10.7 81 1-87 1-100 (319)
158 3cps_A Glyceraldehyde 3-phosph 97.8 2.8E-05 9.5E-10 71.0 6.9 102 4-109 15-139 (354)
159 1lss_A TRK system potassium up 97.8 0.00013 4.3E-09 57.3 10.0 82 6-94 4-89 (140)
160 1evy_A Glycerol-3-phosphate de 97.8 4.2E-05 1.4E-09 71.0 7.9 78 7-93 16-104 (366)
161 4a7p_A UDP-glucose dehydrogena 97.8 0.00017 5.8E-09 68.4 11.6 106 6-124 8-144 (446)
162 3b1j_A Glyceraldehyde 3-phosph 97.8 7.5E-05 2.6E-09 68.0 8.7 104 6-110 2-126 (339)
163 1q0q_A 1-deoxy-D-xylulose 5-ph 97.7 0.0012 3.9E-08 60.1 16.0 213 6-248 9-276 (406)
164 3cmc_O GAPDH, glyceraldehyde-3 97.7 5.1E-05 1.7E-09 69.0 7.2 98 6-110 1-123 (334)
165 1gad_O D-glyceraldehyde-3-phos 97.7 0.00015 5.2E-09 65.8 10.3 98 6-109 1-122 (330)
166 2vns_A Metalloreductase steap3 97.7 3.1E-05 1E-09 66.2 5.4 68 5-85 27-94 (215)
167 2y0c_A BCEC, UDP-glucose dehyd 97.7 0.00014 5E-09 69.7 10.6 71 6-85 8-95 (478)
168 3ktd_A Prephenate dehydrogenas 97.7 5.4E-05 1.9E-09 69.2 7.2 104 6-121 8-113 (341)
169 1z82_A Glycerol-3-phosphate de 97.7 6.9E-05 2.3E-09 68.6 7.6 94 5-110 13-115 (335)
170 3k96_A Glycerol-3-phosphate de 97.7 0.00011 3.8E-09 67.7 8.9 97 6-111 29-138 (356)
171 3au8_A 1-deoxy-D-xylulose 5-ph 97.6 0.0011 3.8E-08 61.2 14.5 217 4-248 75-352 (488)
172 1f0y_A HCDH, L-3-hydroxyacyl-C 97.6 0.0005 1.7E-08 61.8 12.3 76 6-87 15-113 (302)
173 1jay_A Coenzyme F420H2:NADP+ o 97.6 5.4E-05 1.8E-09 64.4 5.1 77 7-93 1-83 (212)
174 3ff4_A Uncharacterized protein 97.6 7.8E-05 2.7E-09 57.3 5.3 103 5-132 3-109 (122)
175 2d2i_A Glyceraldehyde 3-phosph 97.6 0.00016 5.6E-09 66.4 8.4 104 6-110 2-126 (380)
176 1gpj_A Glutamyl-tRNA reductase 97.6 0.00023 8E-09 66.8 9.4 75 6-88 167-241 (404)
177 3hsk_A Aspartate-semialdehyde 97.6 6.5E-05 2.2E-09 69.5 5.4 146 4-159 17-195 (381)
178 3dr3_A N-acetyl-gamma-glutamyl 97.6 8.4E-05 2.9E-09 67.7 5.9 141 6-156 4-176 (337)
179 1txg_A Glycerol-3-phosphate de 97.6 0.00031 1.1E-08 64.1 9.8 79 7-94 1-91 (335)
180 2ew2_A 2-dehydropantoate 2-red 97.5 0.00014 4.8E-09 65.7 7.1 81 6-94 3-94 (316)
181 1x0v_A GPD-C, GPDH-C, glycerol 97.5 0.00032 1.1E-08 64.6 9.5 85 4-94 6-110 (354)
182 3vtf_A UDP-glucose 6-dehydroge 97.5 0.00084 2.9E-08 63.2 12.1 123 5-137 20-174 (444)
183 3g79_A NDP-N-acetyl-D-galactos 97.5 0.00038 1.3E-08 66.5 9.9 75 5-86 17-113 (478)
184 2csu_A 457AA long hypothetical 97.5 8.4E-05 2.9E-09 70.9 5.3 109 5-132 7-125 (457)
185 2egg_A AROE, shikimate 5-dehyd 97.5 8.9E-05 3E-09 66.6 5.0 119 6-139 141-267 (297)
186 1hdg_O Holo-D-glyceraldehyde-3 97.5 0.00019 6.6E-09 65.1 7.0 102 7-110 1-124 (332)
187 3fr7_A Putative ketol-acid red 97.4 0.00014 4.9E-09 68.5 6.0 81 7-93 55-140 (525)
188 3c7a_A Octopine dehydrogenase; 97.4 0.00082 2.8E-08 63.1 11.3 99 6-112 2-120 (404)
189 3llv_A Exopolyphosphatase-rela 97.4 0.0003 1E-08 55.4 7.0 95 1-105 1-101 (141)
190 1rm4_O Glyceraldehyde 3-phosph 97.4 0.00062 2.1E-08 61.7 9.4 102 6-110 1-126 (337)
191 3d4o_A Dipicolinate synthase s 97.4 0.00046 1.6E-08 61.8 8.5 115 6-141 155-274 (293)
192 2rir_A Dipicolinate synthase, 97.4 0.00035 1.2E-08 62.8 7.7 88 6-106 157-244 (300)
193 3phh_A Shikimate dehydrogenase 97.3 0.001 3.6E-08 58.4 9.9 115 7-146 119-242 (269)
194 2qyt_A 2-dehydropantoate 2-red 97.3 0.00044 1.5E-08 62.5 7.8 81 6-94 8-103 (317)
195 2d0i_A Dehydrogenase; structur 97.3 0.00077 2.6E-08 61.4 9.3 67 5-85 145-211 (333)
196 3fwz_A Inner membrane protein 97.3 0.00056 1.9E-08 53.9 7.3 105 4-120 5-115 (140)
197 3mwd_B ATP-citrate synthase; A 97.3 0.0012 4.2E-08 59.7 10.2 123 5-137 9-139 (334)
198 3jtm_A Formate dehydrogenase, 97.3 0.00042 1.4E-08 63.5 7.3 68 6-85 164-231 (351)
199 2obn_A Hypothetical protein; s 97.3 0.00037 1.3E-08 63.3 6.5 118 4-134 5-133 (349)
200 3u62_A Shikimate dehydrogenase 97.3 0.00011 3.7E-09 64.3 2.9 69 8-86 110-178 (253)
201 2r00_A Aspartate-semialdehyde 97.3 0.00017 5.7E-09 65.9 4.2 139 5-160 2-154 (336)
202 2nqt_A N-acetyl-gamma-glutamyl 97.2 0.00049 1.7E-08 63.1 7.0 143 4-158 7-180 (352)
203 2g1u_A Hypothetical protein TM 97.2 0.00045 1.5E-08 55.5 5.7 84 6-96 19-106 (155)
204 3ojo_A CAP5O; rossmann fold, c 97.2 0.001 3.4E-08 62.7 8.9 103 7-123 12-143 (431)
205 2hjs_A USG-1 protein homolog; 97.2 0.00028 9.5E-09 64.5 5.0 141 6-160 6-156 (340)
206 2dbq_A Glyoxylate reductase; D 97.2 0.0013 4.3E-08 60.1 9.3 67 6-86 150-216 (334)
207 1u8x_X Maltose-6'-phosphate gl 97.2 0.0015 5E-08 62.3 9.9 80 5-86 27-114 (472)
208 1npy_A Hypothetical shikimate 97.2 0.0003 1E-08 62.1 4.8 121 7-146 120-247 (271)
209 1ldn_A L-lactate dehydrogenase 97.2 0.0012 4.1E-08 59.7 8.6 82 1-86 1-86 (316)
210 2nac_A NAD-dependent formate d 97.2 0.00072 2.5E-08 62.8 7.2 68 6-85 191-258 (393)
211 1gdh_A D-glycerate dehydrogena 97.1 0.00085 2.9E-08 60.8 7.5 68 6-86 146-214 (320)
212 2ekl_A D-3-phosphoglycerate de 97.1 0.0013 4.5E-08 59.4 8.6 67 6-86 142-208 (313)
213 2w2k_A D-mandelate dehydrogena 97.1 0.001 3.5E-08 61.0 7.9 69 6-86 163-232 (348)
214 1zej_A HBD-9, 3-hydroxyacyl-CO 97.1 0.00081 2.8E-08 60.0 7.0 100 6-116 12-115 (293)
215 1pzg_A LDH, lactate dehydrogen 97.1 0.0021 7.1E-08 58.5 9.6 72 6-82 9-86 (331)
216 1wwk_A Phosphoglycerate dehydr 97.1 0.0011 3.8E-08 59.7 7.7 67 6-86 142-208 (307)
217 2ph5_A Homospermidine synthase 97.1 0.00012 4.1E-09 69.1 1.4 89 6-105 13-112 (480)
218 3l4b_C TRKA K+ channel protien 97.1 0.0029 9.9E-08 53.8 10.1 102 7-119 1-108 (218)
219 2ep7_A GAPDH, glyceraldehyde-3 97.1 0.00057 2E-08 61.8 5.8 101 6-109 2-123 (342)
220 1yj8_A Glycerol-3-phosphate de 97.1 0.00062 2.1E-08 63.2 6.3 84 6-92 21-121 (375)
221 3gg9_A D-3-phosphoglycerate de 97.1 0.00086 3E-08 61.5 7.1 67 6-85 160-226 (352)
222 1mx3_A CTBP1, C-terminal bindi 97.1 0.0007 2.4E-08 62.0 6.5 67 6-85 168-234 (347)
223 4g2n_A D-isomer specific 2-hyd 97.1 0.00091 3.1E-08 61.1 7.2 65 7-85 174-238 (345)
224 3fef_A Putative glucosidase LP 97.1 0.0018 6E-08 61.2 9.2 81 1-86 1-87 (450)
225 1hyh_A L-hicdh, L-2-hydroxyiso 97.1 0.0019 6.4E-08 58.3 9.1 75 7-87 2-82 (309)
226 3d0o_A L-LDH 1, L-lactate dehy 97.1 0.0015 5.3E-08 59.0 8.5 81 1-85 1-85 (317)
227 2j6i_A Formate dehydrogenase; 97.1 0.00099 3.4E-08 61.5 7.1 69 6-86 164-233 (364)
228 3c85_A Putative glutathione-re 97.1 0.0053 1.8E-07 50.5 11.0 103 6-119 39-148 (183)
229 1t2d_A LDH-P, L-lactate dehydr 97.0 0.0021 7.1E-08 58.3 8.7 72 6-83 4-81 (322)
230 2g76_A 3-PGDH, D-3-phosphoglyc 97.0 0.0021 7.1E-08 58.5 8.5 67 6-86 165-231 (335)
231 1jw9_B Molybdopterin biosynthe 97.0 0.0023 7.8E-08 55.7 8.4 93 6-105 31-151 (249)
232 1dlj_A UDP-glucose dehydrogena 97.0 0.0021 7.1E-08 60.2 8.5 69 7-86 1-85 (402)
233 3i83_A 2-dehydropantoate 2-red 97.0 0.0017 5.8E-08 58.9 7.7 97 6-110 2-109 (320)
234 2gcg_A Glyoxylate reductase/hy 97.0 0.0013 4.6E-08 59.8 6.9 68 6-86 155-222 (330)
235 3hwr_A 2-dehydropantoate 2-red 96.9 0.0037 1.3E-07 56.6 9.7 76 5-92 18-104 (318)
236 4hy3_A Phosphoglycerate oxidor 96.9 0.0023 7.9E-08 58.8 8.2 66 7-86 177-242 (365)
237 2pv7_A T-protein [includes: ch 96.9 0.0072 2.5E-07 54.1 11.3 99 7-136 22-122 (298)
238 2hjr_A Malate dehydrogenase; m 96.9 0.0029 9.9E-08 57.5 8.7 73 5-83 13-91 (328)
239 3ghy_A Ketopantoate reductase 96.9 0.0013 4.4E-08 60.1 6.4 74 6-91 3-87 (335)
240 1obb_A Maltase, alpha-glucosid 96.9 0.0018 6.3E-08 61.6 7.5 79 6-87 3-90 (480)
241 1zcj_A Peroxisomal bifunctiona 96.9 0.008 2.7E-07 57.3 12.0 75 6-87 37-127 (463)
242 4e5n_A Thermostable phosphite 96.9 0.0012 4.2E-08 59.9 6.0 67 6-85 145-211 (330)
243 4dgs_A Dehydrogenase; structur 96.9 0.0019 6.5E-08 58.8 7.1 63 6-85 171-233 (340)
244 3ba1_A HPPR, hydroxyphenylpyru 96.9 0.0011 3.8E-08 60.3 5.5 64 6-86 164-227 (333)
245 2hmt_A YUAA protein; RCK, KTN, 96.9 0.0018 6.2E-08 50.7 6.1 88 1-96 1-94 (144)
246 3gvx_A Glycerate dehydrogenase 96.8 0.001 3.5E-08 59.2 4.9 63 6-85 122-184 (290)
247 2ewd_A Lactate dehydrogenase,; 96.8 0.0042 1.4E-07 56.2 9.0 71 6-83 4-81 (317)
248 1vm6_A DHPR, dihydrodipicolina 96.8 0.011 3.8E-07 49.9 10.9 109 6-150 12-121 (228)
249 2g0t_A Conserved hypothetical 96.8 0.0014 4.7E-08 59.7 5.6 114 5-134 21-150 (350)
250 3mog_A Probable 3-hydroxybutyr 96.8 0.0074 2.5E-07 57.8 10.9 101 5-115 4-127 (483)
251 1obf_O Glyceraldehyde 3-phosph 96.8 0.0031 1.1E-07 56.9 7.7 100 6-109 1-125 (335)
252 2g82_O GAPDH, glyceraldehyde-3 96.8 0.0034 1.2E-07 56.8 7.8 97 7-110 1-121 (331)
253 2pi1_A D-lactate dehydrogenase 96.7 0.0031 1E-07 57.4 7.5 103 6-128 141-248 (334)
254 4dvj_A Putative zinc-dependent 96.7 0.011 3.7E-07 54.5 11.4 98 6-112 172-276 (363)
255 4fgw_A Glycerol-3-phosphate de 96.7 0.004 1.4E-07 57.7 8.3 104 4-109 32-154 (391)
256 3gvi_A Malate dehydrogenase; N 96.7 0.0049 1.7E-07 55.8 8.7 74 4-84 5-85 (324)
257 1ez4_A Lactate dehydrogenase; 96.7 0.0042 1.4E-07 56.1 8.3 78 4-85 3-83 (318)
258 2b4r_O Glyceraldehyde-3-phosph 96.7 0.0044 1.5E-07 56.0 8.2 100 4-110 9-134 (345)
259 3hn2_A 2-dehydropantoate 2-red 96.7 0.0048 1.6E-07 55.7 8.5 75 7-94 3-89 (312)
260 1vkn_A N-acetyl-gamma-glutamyl 96.7 0.0031 1.1E-07 57.5 7.1 145 6-162 13-184 (351)
261 1j4a_A D-LDH, D-lactate dehydr 96.7 0.0046 1.6E-07 56.3 8.1 66 6-86 146-211 (333)
262 2yjz_A Metalloreductase steap4 95.7 0.00028 9.6E-09 59.5 0.0 67 5-85 18-84 (201)
263 3pqe_A L-LDH, L-lactate dehydr 96.6 0.0039 1.3E-07 56.5 7.3 75 5-84 4-83 (326)
264 1t4b_A Aspartate-semialdehyde 96.6 0.0081 2.8E-07 55.3 9.5 143 6-159 1-157 (367)
265 1s6y_A 6-phospho-beta-glucosid 96.6 0.0071 2.4E-07 57.3 9.3 80 6-87 7-96 (450)
266 1y6j_A L-lactate dehydrogenase 96.6 0.0021 7.3E-08 58.1 5.5 80 1-85 1-85 (318)
267 3jv7_A ADH-A; dehydrogenase, n 96.6 0.0085 2.9E-07 54.7 9.6 91 7-106 173-270 (345)
268 3hg7_A D-isomer specific 2-hyd 96.6 0.0024 8.2E-08 57.7 5.6 66 6-86 140-206 (324)
269 3kb6_A D-lactate dehydrogenase 96.6 0.0046 1.6E-07 56.2 7.5 65 6-85 141-205 (334)
270 1ur5_A Malate dehydrogenase; o 96.6 0.0065 2.2E-07 54.7 8.5 72 7-84 3-80 (309)
271 3uw3_A Aspartate-semialdehyde 96.6 0.0073 2.5E-07 55.7 8.9 147 5-162 3-163 (377)
272 3jyo_A Quinate/shikimate dehyd 96.6 0.004 1.4E-07 55.3 6.9 74 6-87 127-207 (283)
273 1leh_A Leucine dehydrogenase; 96.6 0.0067 2.3E-07 55.7 8.4 100 6-121 173-274 (364)
274 1ygy_A PGDH, D-3-phosphoglycer 96.6 0.0043 1.5E-07 60.2 7.5 100 6-123 142-246 (529)
275 2zqz_A L-LDH, L-lactate dehydr 96.5 0.0067 2.3E-07 55.0 8.1 80 3-86 6-88 (326)
276 3k6j_A Protein F01G10.3, confi 96.5 0.03 1E-06 53.0 12.7 103 6-115 54-173 (460)
277 1qp8_A Formate dehydrogenase; 96.5 0.0038 1.3E-07 56.0 6.3 63 6-86 124-186 (303)
278 2cuk_A Glycerate dehydrogenase 96.5 0.0036 1.2E-07 56.4 6.1 62 6-86 144-205 (311)
279 3pzr_A Aspartate-semialdehyde 96.5 0.0059 2E-07 56.1 7.5 142 7-160 1-157 (370)
280 2yq5_A D-isomer specific 2-hyd 96.5 0.0053 1.8E-07 55.9 7.1 64 6-85 148-211 (343)
281 3oet_A Erythronate-4-phosphate 96.5 0.0044 1.5E-07 57.1 6.5 63 6-85 119-181 (381)
282 2vhw_A Alanine dehydrogenase; 96.5 0.0059 2E-07 56.6 7.5 71 6-85 168-242 (377)
283 3h9e_O Glyceraldehyde-3-phosph 96.5 0.019 6.4E-07 51.8 10.4 102 3-110 4-129 (346)
284 3ego_A Probable 2-dehydropanto 96.4 0.0031 1.1E-07 56.7 5.4 75 6-91 2-84 (307)
285 1oju_A MDH, malate dehydrogena 96.4 0.0094 3.2E-07 53.1 8.4 73 7-84 1-79 (294)
286 3fbt_A Chorismate mutase and s 96.4 0.002 6.7E-08 57.1 3.8 119 6-146 122-248 (282)
287 1lld_A L-lactate dehydrogenase 96.4 0.015 5E-07 52.5 9.7 74 5-85 6-86 (319)
288 3pwk_A Aspartate-semialdehyde 96.4 0.0011 3.8E-08 60.9 2.1 143 6-163 2-154 (366)
289 3ce6_A Adenosylhomocysteinase; 96.4 0.012 4E-07 56.3 9.1 67 6-85 274-340 (494)
290 3evt_A Phosphoglycerate dehydr 96.4 0.0022 7.5E-08 58.0 3.9 66 6-86 137-203 (324)
291 3pwz_A Shikimate dehydrogenase 96.4 0.0045 1.5E-07 54.6 5.8 74 6-87 120-194 (272)
292 4eez_A Alcohol dehydrogenase 1 96.4 0.016 5.4E-07 52.9 9.7 92 7-106 165-263 (348)
293 2o4c_A Erythronate-4-phosphate 96.4 0.0065 2.2E-07 56.1 7.0 64 6-86 116-179 (380)
294 3q0i_A Methionyl-tRNA formyltr 96.3 0.011 3.9E-07 53.1 8.3 80 3-85 4-96 (318)
295 1guz_A Malate dehydrogenase; o 96.3 0.0091 3.1E-07 53.7 7.8 74 7-85 1-80 (310)
296 4a2c_A Galactitol-1-phosphate 96.3 0.021 7.2E-07 52.0 10.3 134 7-155 162-311 (346)
297 3eag_A UDP-N-acetylmuramate:L- 96.3 0.01 3.4E-07 53.9 8.1 93 5-106 3-96 (326)
298 3da8_A Probable 5'-phosphoribo 96.3 0.019 6.5E-07 48.4 9.1 88 4-96 10-111 (215)
299 3pp8_A Glyoxylate/hydroxypyruv 96.3 0.0022 7.5E-08 57.8 3.4 65 6-85 139-204 (315)
300 3auf_A Glycinamide ribonucleot 96.2 0.013 4.5E-07 50.0 7.9 89 5-96 21-123 (229)
301 1sc6_A PGDH, D-3-phosphoglycer 96.2 0.0055 1.9E-07 57.2 5.9 64 6-85 145-208 (404)
302 1wdk_A Fatty oxidation complex 96.2 0.019 6.4E-07 57.8 10.1 102 6-115 314-436 (715)
303 1id1_A Putative potassium chan 96.2 0.027 9.1E-07 44.7 9.2 92 6-105 3-103 (153)
304 1zud_1 Adenylyltransferase THI 96.2 0.016 5.4E-07 50.5 8.3 93 6-105 28-148 (251)
305 3k5p_A D-3-phosphoglycerate de 96.2 0.0055 1.9E-07 57.2 5.6 64 7-86 157-220 (416)
306 1a5z_A L-lactate dehydrogenase 96.2 0.016 5.6E-07 52.3 8.7 74 7-87 1-80 (319)
307 3two_A Mannitol dehydrogenase; 96.2 0.018 6E-07 52.7 9.1 132 7-158 178-314 (348)
308 1ks9_A KPA reductase;, 2-dehyd 96.2 0.0032 1.1E-07 55.9 3.9 78 7-94 1-83 (291)
309 3ado_A Lambda-crystallin; L-gu 96.2 0.0083 2.8E-07 54.0 6.6 114 1-123 1-135 (319)
310 4ej6_A Putative zinc-binding d 96.2 0.017 5.7E-07 53.4 8.9 130 7-155 184-328 (370)
311 3don_A Shikimate dehydrogenase 96.2 0.001 3.5E-08 58.8 0.5 121 6-146 117-244 (277)
312 3v1y_O PP38, glyceraldehyde-3- 96.1 0.023 7.8E-07 51.1 9.0 98 6-110 3-128 (337)
313 2wtb_A MFP2, fatty acid multif 96.1 0.034 1.2E-06 56.0 11.4 100 6-115 312-434 (725)
314 3p7m_A Malate dehydrogenase; p 96.1 0.02 6.7E-07 51.7 8.6 75 4-84 3-83 (321)
315 2raf_A Putative dinucleotide-b 96.1 0.0091 3.1E-07 50.4 6.0 58 6-93 19-76 (209)
316 1nyt_A Shikimate 5-dehydrogena 96.0 0.015 5.1E-07 51.2 7.6 73 6-87 119-193 (271)
317 3lk7_A UDP-N-acetylmuramoylala 96.0 0.012 4E-07 56.0 7.3 93 6-106 9-102 (451)
318 3s2e_A Zinc-containing alcohol 96.0 0.034 1.2E-06 50.6 9.8 136 7-158 168-309 (340)
319 1dxy_A D-2-hydroxyisocaproate 95.9 0.0076 2.6E-07 54.8 5.3 102 6-128 145-251 (333)
320 3pym_A GAPDH 3, glyceraldehyde 95.9 0.039 1.4E-06 49.4 9.7 98 6-110 1-124 (332)
321 3ulk_A Ketol-acid reductoisome 95.9 0.031 1.1E-06 51.9 9.2 89 6-105 37-130 (491)
322 4g65_A TRK system potassium up 95.9 0.016 5.5E-07 55.2 7.7 74 5-86 2-80 (461)
323 3lvf_P GAPDH 1, glyceraldehyde 95.9 0.12 4E-06 46.5 12.7 99 6-110 4-126 (338)
324 3t4e_A Quinate/shikimate dehyd 95.9 0.011 3.6E-07 53.2 6.1 77 6-87 148-233 (312)
325 3uog_A Alcohol dehydrogenase; 95.9 0.029 9.8E-07 51.6 9.1 132 7-158 191-334 (363)
326 3h9u_A Adenosylhomocysteinase; 95.9 0.028 9.4E-07 52.5 8.9 64 6-82 211-274 (436)
327 2i6t_A Ubiquitin-conjugating e 95.9 0.014 4.8E-07 52.3 6.7 72 6-83 14-86 (303)
328 1yqd_A Sinapyl alcohol dehydro 95.9 0.071 2.4E-06 49.0 11.8 133 7-156 189-326 (366)
329 3l9w_A Glutathione-regulated p 95.9 0.019 6.4E-07 53.9 7.9 104 6-121 4-113 (413)
330 1xdw_A NAD+-dependent (R)-2-hy 95.9 0.0087 3E-07 54.4 5.4 64 6-85 146-209 (331)
331 2cf5_A Atccad5, CAD, cinnamyl 95.9 0.053 1.8E-06 49.7 10.7 134 7-157 182-320 (357)
332 4dib_A GAPDH, glyceraldehyde 3 95.8 0.03 1E-06 50.4 8.4 101 5-110 3-126 (345)
333 3n58_A Adenosylhomocysteinase; 95.8 0.029 9.9E-07 52.4 8.4 64 7-83 248-311 (464)
334 3tnl_A Shikimate dehydrogenase 95.8 0.016 5.6E-07 52.0 6.6 126 7-147 155-298 (315)
335 3doc_A Glyceraldehyde 3-phosph 95.8 0.051 1.7E-06 48.8 9.7 102 6-110 2-126 (335)
336 3fpc_A NADP-dependent alcohol 95.8 0.0051 1.7E-07 56.4 3.4 89 7-105 168-265 (352)
337 3rui_A Ubiquitin-like modifier 95.8 0.046 1.6E-06 49.4 9.5 35 6-43 34-68 (340)
338 3o8q_A Shikimate 5-dehydrogena 95.7 0.0083 2.8E-07 53.1 4.5 74 6-88 126-201 (281)
339 1smk_A Malate dehydrogenase, g 95.7 0.015 5.3E-07 52.6 6.4 73 5-84 7-86 (326)
340 2v6b_A L-LDH, L-lactate dehydr 95.7 0.018 6.2E-07 51.6 6.8 76 7-87 1-80 (304)
341 2eez_A Alanine dehydrogenase; 95.7 0.018 6.1E-07 53.2 6.9 71 6-85 166-240 (369)
342 3krt_A Crotonyl COA reductase; 95.7 0.033 1.1E-06 53.0 8.9 89 7-105 230-343 (456)
343 3fi9_A Malate dehydrogenase; s 95.7 0.016 5.6E-07 52.7 6.3 76 4-83 6-85 (343)
344 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.043 1.5E-06 46.6 8.5 88 6-104 31-119 (223)
345 1piw_A Hypothetical zinc-type 95.7 0.027 9.3E-07 51.7 7.9 88 7-105 181-275 (360)
346 3ip1_A Alcohol dehydrogenase, 95.6 0.076 2.6E-06 49.6 11.0 130 7-155 215-361 (404)
347 3tz6_A Aspartate-semialdehyde 95.6 0.0032 1.1E-07 57.4 1.5 139 7-159 2-151 (344)
348 1fmt_A Methionyl-tRNA FMet for 95.6 0.032 1.1E-06 50.2 8.0 78 5-85 2-92 (314)
349 1p77_A Shikimate 5-dehydrogena 95.6 0.0071 2.4E-07 53.4 3.7 73 6-87 119-193 (272)
350 3nep_X Malate dehydrogenase; h 95.6 0.025 8.4E-07 50.9 7.3 74 7-85 1-80 (314)
351 2ywr_A Phosphoribosylglycinami 95.6 0.022 7.4E-07 48.3 6.5 77 7-86 2-92 (216)
352 3u95_A Glycoside hydrolase, fa 95.6 0.021 7E-07 54.5 7.1 74 7-83 1-85 (477)
353 1e3j_A NADP(H)-dependent ketos 95.6 0.12 4.3E-06 47.0 12.2 129 7-155 170-313 (352)
354 1rjw_A ADH-HT, alcohol dehydro 95.6 0.071 2.4E-06 48.4 10.4 133 7-158 166-307 (339)
355 1pl8_A Human sorbitol dehydrog 95.6 0.12 4.1E-06 47.3 12.0 129 7-155 173-315 (356)
356 3vku_A L-LDH, L-lactate dehydr 95.6 0.022 7.7E-07 51.4 6.7 77 4-84 7-86 (326)
357 3gvp_A Adenosylhomocysteinase 95.5 0.043 1.5E-06 51.1 8.7 63 7-82 221-283 (435)
358 3tl2_A Malate dehydrogenase; c 95.5 0.052 1.8E-06 48.8 9.0 72 5-83 7-87 (315)
359 3av3_A Phosphoribosylglycinami 95.5 0.036 1.2E-06 46.8 7.5 86 7-96 4-104 (212)
360 3hm2_A Precorrin-6Y C5,15-meth 95.5 0.13 4.3E-06 41.5 10.7 75 6-84 26-104 (178)
361 3h8v_A Ubiquitin-like modifier 95.5 0.039 1.3E-06 48.9 7.8 36 5-43 35-70 (292)
362 1f8f_A Benzyl alcohol dehydrog 95.4 0.049 1.7E-06 50.2 8.8 132 7-156 192-338 (371)
363 1v8b_A Adenosylhomocysteinase; 95.4 0.044 1.5E-06 52.0 8.4 64 6-82 257-320 (479)
364 2x0j_A Malate dehydrogenase; o 95.4 0.046 1.6E-06 48.6 8.1 72 7-83 1-78 (294)
365 4gsl_A Ubiquitin-like modifier 95.4 0.064 2.2E-06 52.2 9.5 93 6-105 326-461 (615)
366 3tqq_A Methionyl-tRNA formyltr 95.3 0.048 1.6E-06 48.9 8.1 77 6-85 2-91 (314)
367 3fbg_A Putative arginate lyase 95.3 0.066 2.3E-06 48.8 9.3 89 7-105 152-247 (346)
368 3tqh_A Quinone oxidoreductase; 95.3 0.04 1.4E-06 49.7 7.7 131 7-158 154-290 (321)
369 3d64_A Adenosylhomocysteinase; 95.3 0.048 1.6E-06 52.0 8.2 64 6-82 277-340 (494)
370 3rfo_A Methionyl-tRNA formyltr 95.2 0.032 1.1E-06 50.2 6.4 79 4-85 2-93 (317)
371 3gaz_A Alcohol dehydrogenase s 95.2 0.061 2.1E-06 49.0 8.4 132 7-157 152-299 (343)
372 3tqr_A Phosphoribosylglycinami 95.2 0.11 3.7E-06 43.8 9.2 88 5-96 4-105 (215)
373 1c1d_A L-phenylalanine dehydro 95.2 0.11 3.6E-06 47.4 9.8 106 6-132 175-282 (355)
374 3ldh_A Lactate dehydrogenase; 95.1 0.045 1.5E-06 49.4 7.1 74 6-84 21-99 (330)
375 3g17_A Similar to 2-dehydropan 95.1 0.0014 4.9E-08 58.6 -2.8 76 6-90 2-78 (294)
376 2h6e_A ADH-4, D-arabinose 1-de 95.0 0.12 4.1E-06 47.0 10.0 135 7-158 172-315 (344)
377 3kcq_A Phosphoribosylglycinami 95.0 0.039 1.3E-06 46.6 6.1 89 5-96 7-104 (215)
378 3mb5_A SAM-dependent methyltra 95.0 0.088 3E-06 45.4 8.7 98 6-108 94-195 (255)
379 3m6i_A L-arabinitol 4-dehydrog 95.0 0.042 1.4E-06 50.5 6.9 134 7-155 181-325 (363)
380 1b8p_A Protein (malate dehydro 95.0 0.042 1.4E-06 49.8 6.6 74 5-83 4-92 (329)
381 2d4a_B Malate dehydrogenase; a 94.9 0.058 2E-06 48.3 7.4 72 8-85 1-78 (308)
382 1mld_A Malate dehydrogenase; o 94.9 0.046 1.6E-06 49.2 6.7 72 7-84 1-78 (314)
383 1pjc_A Protein (L-alanine dehy 94.9 0.051 1.7E-06 49.9 7.1 73 6-85 167-241 (361)
384 1zsy_A Mitochondrial 2-enoyl t 94.9 0.12 4E-06 47.4 9.5 136 7-157 169-326 (357)
385 2aef_A Calcium-gated potassium 94.9 0.085 2.9E-06 45.0 8.1 91 6-106 9-104 (234)
386 4aj2_A L-lactate dehydrogenase 94.9 0.055 1.9E-06 48.9 7.1 75 4-83 17-96 (331)
387 3ids_C GAPDH, glyceraldehyde-3 94.8 0.1 3.5E-06 47.2 8.6 99 6-110 2-138 (359)
388 1up7_A 6-phospho-beta-glucosid 94.8 0.071 2.4E-06 49.9 7.9 78 6-86 2-85 (417)
389 3e05_A Precorrin-6Y C5,15-meth 94.8 0.092 3.2E-06 43.6 8.0 75 6-84 41-118 (204)
390 2xxj_A L-LDH, L-lactate dehydr 94.8 0.04 1.4E-06 49.5 5.8 74 7-85 1-78 (310)
391 4ea9_A Perosamine N-acetyltran 94.7 0.084 2.9E-06 44.7 7.6 79 5-96 11-93 (220)
392 2bw0_A 10-FTHFDH, 10-formyltet 94.7 0.043 1.5E-06 49.6 6.0 77 4-83 20-108 (329)
393 3pff_A ATP-citrate synthase; p 94.7 0.12 4.2E-06 52.2 9.8 122 5-137 495-625 (829)
394 4ds3_A Phosphoribosylglycinami 94.7 0.064 2.2E-06 45.0 6.4 90 4-96 5-108 (209)
395 3vh1_A Ubiquitin-like modifier 94.6 0.1 3.5E-06 50.7 8.7 34 6-42 327-360 (598)
396 3gms_A Putative NADPH:quinone 94.6 0.069 2.4E-06 48.5 7.2 89 7-106 146-243 (340)
397 4a0s_A Octenoyl-COA reductase/ 94.6 0.34 1.2E-05 45.7 12.3 89 7-106 222-336 (447)
398 4hv4_A UDP-N-acetylmuramate--L 94.6 0.093 3.2E-06 50.4 8.3 89 6-106 22-111 (494)
399 2bln_A Protein YFBG; transfera 94.5 0.097 3.3E-06 46.7 7.8 74 7-83 1-84 (305)
400 1kol_A Formaldehyde dehydrogen 94.5 0.14 4.7E-06 47.6 9.2 90 7-105 187-299 (398)
401 4eye_A Probable oxidoreductase 94.5 0.12 4.1E-06 47.0 8.5 89 7-106 161-257 (342)
402 1l7d_A Nicotinamide nucleotide 94.5 0.12 4.2E-06 47.8 8.6 40 6-49 172-211 (384)
403 3tum_A Shikimate dehydrogenase 94.4 0.03 1E-06 49.1 4.0 73 6-86 125-199 (269)
404 3jyn_A Quinone oxidoreductase; 94.4 0.11 3.7E-06 46.8 7.8 90 7-107 142-240 (325)
405 3qwb_A Probable quinone oxidor 94.3 0.21 7.3E-06 45.1 9.8 88 7-105 150-246 (334)
406 3pi7_A NADH oxidoreductase; gr 94.3 0.071 2.4E-06 48.6 6.5 87 9-106 167-263 (349)
407 1gr0_A Inositol-3-phosphate sy 94.3 0.51 1.7E-05 42.6 11.7 141 5-152 14-217 (367)
408 2d8a_A PH0655, probable L-thre 94.3 0.093 3.2E-06 47.8 7.3 131 7-155 169-312 (348)
409 3p9x_A Phosphoribosylglycinami 94.2 0.16 5.4E-06 42.6 7.9 87 6-96 2-103 (211)
410 1uuf_A YAHK, zinc-type alcohol 94.2 0.1 3.5E-06 48.0 7.5 136 7-158 196-335 (369)
411 3p2y_A Alanine dehydrogenase/p 94.2 0.12 4.1E-06 47.5 7.7 42 6-51 184-225 (381)
412 3dfu_A Uncharacterized protein 94.2 0.099 3.4E-06 44.6 6.7 33 5-41 5-37 (232)
413 1h2b_A Alcohol dehydrogenase; 94.2 0.12 4.1E-06 47.3 7.8 132 7-158 188-330 (359)
414 3nvt_A 3-deoxy-D-arabino-heptu 94.1 0.23 7.8E-06 45.8 9.4 87 44-134 193-283 (385)
415 2eih_A Alcohol dehydrogenase; 94.1 0.17 5.7E-06 46.0 8.5 132 7-158 168-312 (343)
416 3h5n_A MCCB protein; ubiquitin 94.1 0.19 6.4E-06 45.9 8.8 35 6-43 118-152 (353)
417 4h7p_A Malate dehydrogenase; s 94.0 0.21 7.3E-06 45.3 9.0 76 3-83 21-109 (345)
418 1jvb_A NAD(H)-dependent alcoho 94.0 0.12 4.2E-06 46.9 7.5 133 7-157 172-316 (347)
419 2vn8_A Reticulon-4-interacting 94.0 0.33 1.1E-05 44.6 10.5 140 7-158 185-344 (375)
420 1y8q_A Ubiquitin-like 1 activa 93.9 0.31 1.1E-05 44.3 9.9 35 6-43 36-70 (346)
421 1x13_A NAD(P) transhydrogenase 93.9 0.18 6.1E-06 47.0 8.5 40 6-49 172-211 (401)
422 4dio_A NAD(P) transhydrogenase 93.9 0.23 7.8E-06 46.0 9.0 42 6-51 190-231 (405)
423 3e8x_A Putative NAD-dependent 93.8 0.34 1.2E-05 41.1 9.6 71 5-85 20-95 (236)
424 3hn7_A UDP-N-acetylmuramate-L- 93.8 0.11 3.7E-06 50.3 7.0 92 6-106 19-110 (524)
425 2yvl_A TRMI protein, hypotheti 93.8 0.3 1E-05 41.7 9.2 95 6-108 92-191 (248)
426 3dhn_A NAD-dependent epimerase 93.7 0.044 1.5E-06 46.4 3.7 102 6-134 4-111 (227)
427 2yv3_A Aspartate-semialdehyde 93.7 0.037 1.3E-06 50.2 3.3 88 7-109 1-93 (331)
428 3r6d_A NAD-dependent epimerase 93.7 0.43 1.5E-05 40.0 9.9 69 8-84 7-83 (221)
429 3fs2_A 2-dehydro-3-deoxyphosph 93.7 0.29 9.9E-06 43.1 8.9 82 44-128 99-183 (298)
430 1zco_A 2-dehydro-3-deoxyphosph 93.7 0.92 3.1E-05 39.4 12.1 111 9-126 25-156 (262)
431 1qyd_A Pinoresinol-lariciresin 93.7 0.36 1.2E-05 42.8 9.9 72 6-84 4-86 (313)
432 1wly_A CAAR, 2-haloacrylate re 93.7 0.38 1.3E-05 43.3 10.1 134 7-158 147-301 (333)
433 2r6j_A Eugenol synthase 1; phe 93.6 0.23 7.8E-06 44.3 8.4 83 7-96 12-104 (318)
434 3i6i_A Putative leucoanthocyan 93.6 0.18 6.3E-06 45.6 7.8 88 4-96 8-108 (346)
435 3gqv_A Enoyl reductase; medium 93.6 0.64 2.2E-05 42.6 11.6 88 7-105 166-262 (371)
436 3slg_A PBGP3 protein; structur 93.5 0.072 2.5E-06 48.8 5.1 75 1-83 19-100 (372)
437 3gd5_A Otcase, ornithine carba 93.5 0.28 9.6E-06 43.9 8.6 77 5-86 156-237 (323)
438 3uko_A Alcohol dehydrogenase c 93.5 0.079 2.7E-06 48.9 5.3 132 7-156 195-343 (378)
439 1vli_A Spore coat polysacchari 93.5 0.56 1.9E-05 43.0 10.6 83 42-127 99-184 (385)
440 2dq4_A L-threonine 3-dehydroge 93.4 0.1 3.5E-06 47.4 5.8 131 7-155 166-307 (343)
441 2bh9_A G6PD, glucose-6-phospha 93.4 0.79 2.7E-05 43.2 11.7 339 5-358 4-449 (489)
442 4b7c_A Probable oxidoreductase 93.4 0.27 9.1E-06 44.4 8.5 143 7-161 151-309 (336)
443 3sz8_A 2-dehydro-3-deoxyphosph 93.3 0.35 1.2E-05 42.4 8.7 79 44-126 78-160 (285)
444 1o54_A SAM-dependent O-methylt 93.3 0.25 8.5E-06 43.2 8.0 97 7-108 114-214 (277)
445 2b5w_A Glucose dehydrogenase; 93.2 0.74 2.5E-05 41.9 11.4 132 7-153 174-319 (357)
446 1p0f_A NADP-dependent alcohol 93.2 0.17 5.8E-06 46.5 7.0 130 7-156 193-340 (373)
447 1yzh_A TRNA (guanine-N(7)-)-me 93.2 0.78 2.7E-05 38.2 10.6 75 6-84 42-121 (214)
448 4a27_A Synaptic vesicle membra 93.1 0.22 7.4E-06 45.3 7.6 89 7-107 144-239 (349)
449 1dpg_A G6PD, glucose 6-phospha 93.0 1.1 3.7E-05 42.3 12.0 120 5-124 4-165 (485)
450 2hcy_A Alcohol dehydrogenase 1 93.0 0.23 7.9E-06 45.1 7.5 134 7-158 171-316 (347)
451 3dmy_A Protein FDRA; predicted 93.0 0.12 4.1E-06 49.1 5.7 74 57-137 20-94 (480)
452 4ep1_A Otcase, ornithine carba 93.0 0.38 1.3E-05 43.3 8.6 76 5-85 178-258 (340)
453 3fpf_A Mtnas, putative unchara 92.9 0.49 1.7E-05 41.9 9.2 73 6-83 123-197 (298)
454 4dup_A Quinone oxidoreductase; 92.9 0.16 5.5E-06 46.3 6.3 138 7-158 169-323 (353)
455 1qor_A Quinone oxidoreductase; 92.9 0.4 1.4E-05 43.0 8.9 88 7-105 142-238 (327)
456 2jhf_A Alcohol dehydrogenase E 92.9 0.29 9.8E-06 45.0 8.0 130 7-156 193-341 (374)
457 3dxy_A TRNA (guanine-N(7)-)-me 92.8 0.46 1.6E-05 40.0 8.7 76 6-85 35-116 (218)
458 4e4t_A Phosphoribosylaminoimid 92.8 0.3 1E-05 45.7 8.2 83 5-96 34-117 (419)
459 2fzw_A Alcohol dehydrogenase c 92.8 0.31 1.1E-05 44.7 8.2 130 7-156 192-340 (373)
460 3dqp_A Oxidoreductase YLBE; al 92.8 0.13 4.6E-06 43.1 5.2 94 7-126 1-96 (219)
461 2fca_A TRNA (guanine-N(7)-)-me 92.7 1.6 5.4E-05 36.4 11.9 75 6-84 39-118 (213)
462 2dph_A Formaldehyde dismutase; 92.7 0.34 1.2E-05 45.0 8.4 90 7-105 187-298 (398)
463 1o6z_A MDH, malate dehydrogena 92.7 0.27 9.4E-06 43.8 7.4 73 7-84 1-80 (303)
464 3njr_A Precorrin-6Y methylase; 92.7 0.81 2.8E-05 37.9 10.0 71 6-82 56-130 (204)
465 1e3i_A Alcohol dehydrogenase, 92.7 0.28 9.4E-06 45.1 7.7 130 7-156 197-343 (376)
466 1v3u_A Leukotriene B4 12- hydr 92.6 0.37 1.3E-05 43.4 8.4 140 7-158 147-303 (333)
467 2c0c_A Zinc binding alcohol de 92.6 0.42 1.4E-05 43.7 8.8 89 7-106 165-261 (362)
468 1pjq_A CYSG, siroheme synthase 92.5 0.37 1.3E-05 45.7 8.4 87 6-103 12-100 (457)
469 1jkx_A GART;, phosphoribosylgl 92.5 0.52 1.8E-05 39.6 8.3 87 7-96 1-101 (212)
470 1tt5_A APPBP1, amyloid protein 92.4 0.55 1.9E-05 45.3 9.5 35 6-43 32-66 (531)
471 1vs1_A 3-deoxy-7-phosphoheptul 92.4 0.62 2.1E-05 40.8 9.0 80 43-126 88-171 (276)
472 1cdo_A Alcohol dehydrogenase; 92.3 0.33 1.1E-05 44.5 7.7 131 7-156 194-341 (374)
473 3ius_A Uncharacterized conserv 92.2 0.19 6.7E-06 43.9 5.7 69 5-85 4-74 (286)
474 3o1l_A Formyltetrahydrofolate 92.1 0.19 6.6E-06 44.6 5.6 75 5-85 104-192 (302)
475 2tmg_A Protein (glutamate dehy 92.1 1.8 6E-05 40.2 12.2 114 5-134 208-337 (415)
476 3goh_A Alcohol dehydrogenase, 92.1 0.14 4.7E-06 45.9 4.7 85 7-105 144-228 (315)
477 3aoe_E Glutamate dehydrogenase 92.1 1.5 5.1E-05 40.8 11.6 112 5-133 217-340 (419)
478 3n0v_A Formyltetrahydrofolate 92.1 0.33 1.1E-05 42.8 6.9 86 4-95 88-187 (286)
479 1y8q_B Anthracycline-, ubiquit 91.9 0.4 1.4E-05 47.1 7.9 35 6-43 17-51 (640)
480 3hhp_A Malate dehydrogenase; M 91.9 0.44 1.5E-05 42.6 7.7 74 7-84 1-79 (312)
481 2i6u_A Otcase, ornithine carba 91.8 0.62 2.1E-05 41.4 8.5 75 6-85 148-228 (307)
482 3hja_A GAPDH, glyceraldehyde-3 91.8 0.17 5.8E-06 45.7 4.8 99 5-109 20-146 (356)
483 3ew7_A LMO0794 protein; Q8Y8U8 91.7 0.88 3E-05 37.8 9.2 88 7-125 1-92 (221)
484 1lnq_A MTHK channels, potassiu 91.7 0.68 2.3E-05 41.7 8.9 89 7-106 116-210 (336)
485 1qyc_A Phenylcoumaran benzylic 91.7 0.71 2.4E-05 40.7 8.9 84 6-96 4-102 (308)
486 3aog_A Glutamate dehydrogenase 91.7 1.1 3.6E-05 42.0 10.2 113 5-134 234-362 (440)
487 1gu7_A Enoyl-[acyl-carrier-pro 91.6 0.87 3E-05 41.5 9.6 136 7-157 169-330 (364)
488 2py6_A Methyltransferase FKBM; 91.5 0.044 1.5E-06 51.2 0.7 78 6-96 52-131 (409)
489 3tpf_A Otcase, ornithine carba 91.4 0.76 2.6E-05 40.8 8.6 76 6-86 146-226 (307)
490 1vlv_A Otcase, ornithine carba 91.4 0.59 2E-05 41.9 7.9 75 6-85 167-247 (325)
491 1duv_G Octase-1, ornithine tra 91.4 0.67 2.3E-05 41.6 8.3 126 6-150 155-289 (333)
492 2w37_A Ornithine carbamoyltran 91.2 0.76 2.6E-05 41.7 8.5 128 6-151 176-311 (359)
493 1iz0_A Quinone oxidoreductase; 91.2 0.18 6E-06 44.9 4.4 130 7-157 127-271 (302)
494 1hye_A L-lactate/malate dehydr 91.2 0.31 1E-05 43.7 6.0 73 7-83 1-83 (313)
495 2zb4_A Prostaglandin reductase 91.2 1.1 3.9E-05 40.6 10.0 140 7-158 162-321 (357)
496 1nvt_A Shikimate 5'-dehydrogen 91.1 0.16 5.5E-06 44.9 3.9 70 7-87 129-206 (287)
497 3c1o_A Eugenol synthase; pheny 91.1 0.83 2.8E-05 40.6 8.8 90 6-104 4-110 (321)
498 2wqp_A Polysialic acid capsule 91.0 0.54 1.8E-05 42.5 7.3 78 47-127 94-174 (349)
499 1qv9_A F420-dependent methylen 91.0 1.9 6.3E-05 36.2 9.8 81 5-95 2-87 (283)
500 1meo_A Phosophoribosylglycinam 91.0 0.61 2.1E-05 39.0 7.2 86 8-96 2-101 (209)
No 1
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=100.00 E-value=1.7e-62 Score=466.40 Aligned_cols=354 Identities=22% Similarity=0.285 Sum_probs=281.5
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhcC-----CCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCE
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLRS-----QGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDV 77 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~-----~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~ 77 (376)
+|+++||||||+|.+|+.|+++++.++. .+.+|++|||++++ ++++++++||++ +.|+|+++||+++++|+
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~---~a~~~a~~~g~~-~~~~d~~~ll~~~~iDa 78 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAE---AVRAAAGKLGWS-TTETDWRTLLERDDVQL 78 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHH---HHHHHHHHHTCS-EEESCHHHHTTCTTCSE
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHH---HHHHHHHHcCCC-cccCCHHHHhcCCCCCE
Confidence 4678999999999999999999988720 13499999999998 788899999997 89999999999999999
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHH---HHhCCCeEEEEeeccccCHHHHHHHHHHHcCC
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDA---ARKRPDILVQVGLEYRYMPPVAKLIQIVKSGS 154 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~---a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~ 154 (376)
|+||||+..|++++++||+ +|||||||||++.|++|+++|.++ + +++|+.+++++++||+|.++.+|++|++|.
T Consensus 79 V~I~tP~~~H~~~~~~al~--aGkhVl~EKPla~t~~ea~~l~~~~~~~-~~~g~~~~v~~~~R~~p~~~~~k~~i~~g~ 155 (390)
T 4h3v_A 79 VDVCTPGDSHAEIAIAALE--AGKHVLCEKPLANTVAEAEAMAAAAAKA-AAGGIRSMVGFTYRRVPAIALARKLVADGK 155 (390)
T ss_dssp EEECSCGGGHHHHHHHHHH--TTCEEEEESSSCSSHHHHHHHHHHHHHH-HHTTCCEEEECGGGGSHHHHHHHHHHHTTS
T ss_pred EEEeCChHHHHHHHHHHHH--cCCCceeecCcccchhHHHHHHHHHHHH-HhcCCceEEEeeeccCchHHHHHHHHHcCC
Confidence 9999999999999999999 999999999999999999999665 6 346999999999999999999999999999
Q ss_pred CCceEEEEEeeccC--CcccccCccccccc-cCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccc-------
Q 017143 155 IGQVKMVAIREHRF--PFLVKVNDWNRFNE-NTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEM------- 224 (376)
Q Consensus 155 iG~i~~~~~~~~~~--~~~~~~~~w~~~~~-~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~------- 224 (376)
||+|+.+++.+... .....+.+|+.++. .|||+++|+|+|.+|+++||+|.+|++|+|...+........
T Consensus 156 iG~i~~v~~~~~~~~~~~~~~~~~wr~~~~~~GgG~l~d~g~H~iD~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~ 235 (390)
T 4h3v_A 156 IGTVRHVRAQYLQDWIADPEAPLSWRLDKDKAGSGALGDIGAHIVDLTQFITGDRIAEVSGRLETFVKERPKPEAHSGLS 235 (390)
T ss_dssp SCSEEEEEEEEECCTTCSTTSCCCGGGCHHHHSCSHHHHTHHHHHHHHHHHHSCCEEEEEEEEECSCCEEECTTCCCCC-
T ss_pred CCcceeeEEEEeeeccCCCCCCccccccccccCCcchhhhHHHHHHHHHHHhCCCceEEEEEEEeecccCCccccccccc
Confidence 99999999865432 22334567877655 578999999999999999999988999999876543221110
Q ss_pred ----cCCCCCcccccEEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce-eeeecccC--CccceEE
Q 017143 225 ----YNGKVPDIIDNAYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI-VRFATREA--GREDVQT 297 (376)
Q Consensus 225 ----~~~~~~~~~d~~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~-~~~~~~~~--~~~~~~~ 297 (376)
......+++|.+.++++|+||.++++..++...+.....+++|+|++|++.++..... +.+..... ...+...
T Consensus 236 ~~~~~~~~~~~vdd~~~~~~~~~~G~~~~~~~s~~~~~~~~~~~~~i~G~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
T 4h3v_A 236 GTASAERGPVTVDDAAVFLATFRGGALGVFEATRFATGRKNAIRIEINGSKGSLAFDFEDMNLLHFYDATEDPETAGFRR 315 (390)
T ss_dssp -CCGGGEEECCSCSEEEEEEEETTSCEEEEEEESCCTTCSSEEEEEEEESSEEEEEEGGGTTEEEEEETTSCTTTCCEEE
T ss_pred ccccccccccccccceeeEEecCCCcEEeeeeeccccCCCCcceeEEEcceEEEEEecCCCceEEEecCCCCcccccccc
Confidence 0011246889999999999999999999888777767778999999999998764332 22221111 1112222
Q ss_pred eeccCccccc-c--------CCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehh
Q 017143 298 LKAEDDRIEY-E--------GLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEE 365 (376)
Q Consensus 298 ~~~~~~~~~~-~--------~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~ 365 (376)
.....+.... . ....+.+..++++|+++|+ ++.++.++++|++++++|++|+++|+++|++|+|||
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ai~--~g~~~~~~~~dal~~~~i~~A~~~Sa~~g~~V~vpe 390 (390)
T 4h3v_A 316 ILATEPVHPYVAGWWPPGHLLGYEHGFTHQVVDLVTAIA--EGKDPEPSFADGLQVQRVLAAVETSSTSRQWQEIPE 390 (390)
T ss_dssp EESCSTTSTTGGGSCCTTCCCCTTHHHHHHHHHHHHHHH--HTCCCSSCHHHHHHHHHHHHHHHHHHHHTBCEECCC
T ss_pred ccccCccccccccccCCCcccchhHHHHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHHHHhCCCCeECcC
Confidence 2111111100 0 0112345578999999999 667788999999999999999999999999999986
No 2
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=100.00 E-value=8.3e-62 Score=464.34 Aligned_cols=353 Identities=20% Similarity=0.241 Sum_probs=280.4
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhc------CCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCC
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLR------SQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~------~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D 76 (376)
|++||||||||+|++|+.|++++++.. .++++|+||||++++ ++++++++||++ +.|+|+++||+++++|
T Consensus 23 Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~---~a~~~a~~~~~~-~~y~d~~~ll~~~~vD 98 (412)
T 4gqa_A 23 MSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQA---MAERHAAKLGAE-KAYGDWRELVNDPQVD 98 (412)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHH---HHHHHHHHHTCS-EEESSHHHHHHCTTCC
T ss_pred ccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHH---HHHHHHHHcCCC-eEECCHHHHhcCCCCC
Confidence 345899999999999999999998762 247899999999998 788899999986 8999999999999999
Q ss_pred EEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCC
Q 017143 77 VVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIG 156 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG 156 (376)
+|+||||+..|++++++||+ +|||||||||++.|++|+++|+++|+ ++|+.+++++++||.|.++++|++|++|.||
T Consensus 99 ~V~I~tp~~~H~~~~~~al~--aGkhVl~EKP~a~~~~ea~~l~~~a~-~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG 175 (412)
T 4gqa_A 99 VVDITSPNHLHYTMAMAAIA--AGKHVYCEKPLAVNEQQAQEMAQAAR-RAGVKTMVAFNNIKTPAALLAKQIIARGDIG 175 (412)
T ss_dssp EEEECSCGGGHHHHHHHHHH--TTCEEEEESCSCSSHHHHHHHHHHHH-HHTCCEEEECGGGTSHHHHHHHHHHHHTTTC
T ss_pred EEEECCCcHHHHHHHHHHHH--cCCCeEeecCCcCCHHHHHHHHHHHH-HhCCeeeeccceecCHHHHHHHHHHhcCCcC
Confidence 99999999999999999999 99999999999999999999999995 5599999999999999999999999999999
Q ss_pred ceEEEEEeeccC--CcccccCccccccc-cCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCcc----------
Q 017143 157 QVKMVAIREHRF--PFLVKVNDWNRFNE-NTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDE---------- 223 (376)
Q Consensus 157 ~i~~~~~~~~~~--~~~~~~~~w~~~~~-~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~---------- 223 (376)
+|+.++..+... .....+.+|+.++. .+||+++|+|+|.+|+++||+| +|.+|++...+.......
T Consensus 176 ~i~~~~~~~~~~~~~~~~~~~~wr~~~~~~GgG~l~d~g~H~iD~~~~l~G-~~~~V~a~~~~~~~~r~~~~~~~~~~~~ 254 (412)
T 4gqa_A 176 EPVRFRGTFDQGFYNDPNLPWSWRCSKTLGGSGALGDLGAHTLSVAQFLLG-GIREVTASAQTCLRQRPVPQRDAGYASR 254 (412)
T ss_dssp SEEEEEEEEECCSTTSTTSCCCGGGCTTTTCCSHHHHTHHHHHHHHHHHHC-CEEEEEEEEECCSCEEECC---------
T ss_pred CeEEEEEEeccccccCCCCCccceeccccCCCcchhhhhhhHHHHHHHHhC-CCeEEEEEEEeccccccccccccccccc
Confidence 999999865443 22334567877665 4679999999999999999999 799999987654322110
Q ss_pred ---ccCCCCCcccccEEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeeccc-ceeeeecccC--CccceEE
Q 017143 224 ---MYNGKVPDIIDNAYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPE-SIVRFATREA--GREDVQT 297 (376)
Q Consensus 224 ---~~~~~~~~~~d~~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~-~~~~~~~~~~--~~~~~~~ 297 (376)
.......+++|++.++++|+||.++++..++...+.....+++|+|++|++.++... ..+....... ...+...
T Consensus 255 ~~~~~~~~~~~~eD~~~~~l~f~~G~~~~~~~s~~~~~~~~~~~~~i~Gt~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 334 (412)
T 4gqa_A 255 VAADAEWREVENDDQVQCLVNFDSGAAGVIEASRIAAGRIFGVFWEVSGTEGTLYMDGERFNELQVYRFNDDKHDRGFKT 334 (412)
T ss_dssp ---CCCEEECCSCSEEEEEEEETTSCEEEEEEESCCTTCSSEEEEEEEETTEEEEEEGGGTTEEEEEETTSCGGGCCEEE
T ss_pred ccccccccccccceEEEEEEEeCCCcEEEEEEEeeecCCCCceEEEEEeCeEEEEEeccCCceEEEEecCCCccccceee
Confidence 000112467899999999999999999999887776677789999999999987533 2222221111 1112222
Q ss_pred eeccCcccccc--------CCC---CCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehh
Q 017143 298 LKAEDDRIEYE--------GLH---HGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEE 365 (376)
Q Consensus 298 ~~~~~~~~~~~--------~~~---~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~ 365 (376)
+........+. +.. .+.+..++++|+++|+ ++.++.++++|++++++|++|+++|+++|+||+|++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~ai~--~g~~~~~~~~dal~~~~v~~Ai~~Sa~~g~~V~v~~ 411 (412)
T 4gqa_A 335 LYAGSQIPAYAGFFGFDFGGGGLGYFDVKVIEVHDLVQGIC--GDDDCYPNFEFGLQNQRVLSAIEASMVSRRWVNVVK 411 (412)
T ss_dssp EECBTTSGGGGGTCCCSSCBCCCCHHHHHHHHHHHHHHHHS--SSSCCSSCHHHHHHHHHHHHHHHHHHHHCSCEECCC
T ss_pred eccCCcCCcccccccccCcccccchhhHHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCceECCC
Confidence 22111110000 000 1123467899999998 777888999999999999999999999999999974
No 3
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=100.00 E-value=5.3e-62 Score=456.24 Aligned_cols=327 Identities=22% Similarity=0.289 Sum_probs=257.1
Q ss_pred CCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 4 NDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
++||||||||+|.||+. |++.++.. ++++|+||||++++ ++++++++||++ +.|+|+++||+++++|+|+|||
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~--~~~~lvav~d~~~~---~a~~~a~~~g~~-~~y~d~~ell~~~~iDaV~I~t 94 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDA--ENCVVTAIASRDLT---RAREMADRFSVP-HAFGSYEEMLASDVIDAVYIPL 94 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHC--SSEEEEEEECSSHH---HHHHHHHHHTCS-EEESSHHHHHHCSSCSEEEECS
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhC--CCeEEEEEECCCHH---HHHHHHHHcCCC-eeeCCHHHHhcCCCCCEEEEeC
Confidence 45799999999999986 57888888 89999999999998 788999999997 8999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEE
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVA 162 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~ 162 (376)
|+..|++++++||+ +|||||||||++.|++|+++|+++| +++|+.+++++++||.|.++++|++|++|.||+|+.++
T Consensus 95 P~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a-~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~iG~i~~i~ 171 (350)
T 4had_A 95 PTSQHIEWSIKAAD--AGKHVVCEKPLALKAGDIDAVIAAR-DRNKVVVTEAYMITYSPVWQKVRSLIDEGAIGSLRHVQ 171 (350)
T ss_dssp CGGGHHHHHHHHHH--TTCEEEECSCCCSSGGGGHHHHHHH-HHHTCCEEECCGGGGSHHHHHHHHHHHTTTTSSEEEEE
T ss_pred CCchhHHHHHHHHh--cCCEEEEeCCcccchhhHHHHHHHH-HHcCCceeEeeeeecCHHHHHhhHhhhcCCCCcceeee
Confidence 99999999999999 9999999999999999999999999 45599999999999999999999999999999999998
Q ss_pred EeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEe
Q 017143 163 IREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEF 242 (376)
Q Consensus 163 ~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~ 242 (376)
+.+.... ..+.+|+.+...+||+++|+|+|.+|+++||+|.+|++|++...... ..+++|.+.++++|
T Consensus 172 ~~~~~~~--~~~~~~~~~~~~gGG~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~----------~~~~d~~~~~~l~~ 239 (350)
T 4had_A 172 GAFTYFN--RDASNMRNIPELGGGGLPDIGVYPVMSTRFSTGKEPLRIQANTERDP----------DFGTDIYSSVKADF 239 (350)
T ss_dssp EEEEEEC--CCC------------CCHHHHHHHHHHHHHHHCCCCSEEEEEEEECT----------TTCCEEEEEEEEEC
T ss_pred EEEeecc--cccccccCChhhcCCcccCCceehhHHHHHHcCCCceEEEEEEEEcC----------CCCceEEEEEEEEE
Confidence 8654322 23456767777899999999999999999999988999999865432 12578999999999
Q ss_pred cCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeec--cCccccccCCCCCCCHHHHH
Q 017143 243 ENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKA--EDDRIEYEGLHHGSSYLEHL 320 (376)
Q Consensus 243 ~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 320 (376)
+||.++.+...+. ....+++|+|++|+|+++.+...... ... ...+.. ............+.+..+++
T Consensus 240 ~~g~~~~~~~~~~----~~~~~~~i~G~~G~i~i~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (350)
T 4had_A 240 DDFELSFYVSTQM----ANRQIMVFHGTNGYIEVKSPFNANRW-----GPE-EIELADRSHNESRIFRFQDSRQYRREVE 309 (350)
T ss_dssp SSCEEEEEEESEE----EEEEEEEEEESSCEEEESSTTTGGGT-----SCC-EEEEECSSSSEEEEEECTTCCHHHHHHH
T ss_pred CCEEEEEEEecCC----CCCcccccccCceEEEEccccccccC-----Ccc-eEEEecCCCCceeEeecCCChHHHHHHH
Confidence 9998776543322 23457999999999998643211110 000 000000 00111111122345678899
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEe
Q 017143 321 NFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAI 363 (376)
Q Consensus 321 ~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~ 363 (376)
+|+++|+ ++.++.++++|++++++|++|+++|+++|+||.+
T Consensus 310 ~F~~~i~--~g~~~~~~~~dal~~~~iieai~~Sa~~g~wv~V 350 (350)
T 4had_A 310 AFARAVE--NGKEEVVTLENSKLNQKVIDAIYRASEKDGWEAV 350 (350)
T ss_dssp HHHHHHH--HSCSCCCCHHHHHHHHHHHHHHHHHTTSSSCEEC
T ss_pred HHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 9999999 5677889999999999999999999999999975
No 4
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=100.00 E-value=3e-61 Score=458.28 Aligned_cols=353 Identities=20% Similarity=0.264 Sum_probs=275.7
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhc-----CCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCC
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLR-----SQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLC 75 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~-----~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 75 (376)
|+.|+|+||||||+|++|+.|++++..+. .++++|+||||++++ ++++++++||++ +.|+|+++||+++++
T Consensus 20 ~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~---~a~~~a~~~g~~-~~y~d~~ell~~~~i 95 (393)
T 4fb5_A 20 FQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAG---LAEARAGEFGFE-KATADWRALIADPEV 95 (393)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--T---THHHHHHHHTCS-EEESCHHHHHHCTTC
T ss_pred ccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHH---HHHHHHHHhCCC-eecCCHHHHhcCCCC
Confidence 46788999999999999999999887652 267899999999998 678889999997 899999999999999
Q ss_pred CEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 76 DVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
|+|+||||+..|++++++||+ +|||||||||++.|++|+++|+++++ ++|+.+++++++||+|.++++|++|++|.|
T Consensus 96 DaV~IatP~~~H~~~a~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~-~~g~~l~vg~~~R~~p~~~~~k~~i~~G~i 172 (393)
T 4fb5_A 96 DVVSVTTPNQFHAEMAIAALE--AGKHVWCEKPMAPAYADAERMLATAE-RSGKVAALGYNYIQNPVMRHIRKLVGDGVI 172 (393)
T ss_dssp CEEEECSCGGGHHHHHHHHHH--TTCEEEECSCSCSSHHHHHHHHHHHH-HSSSCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred cEEEECCChHHHHHHHHHHHh--cCCeEEEccCCcccHHHHHHhhhhHH-hcCCccccccccccChHHHHHHHHHHcCCC
Confidence 999999999999999999999 99999999999999999999999994 559999999999999999999999999999
Q ss_pred CceEEEEEeeccCCc--ccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCcc-ccCCCCCcc
Q 017143 156 GQVKMVAIREHRFPF--LVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDE-MYNGKVPDI 232 (376)
Q Consensus 156 G~i~~~~~~~~~~~~--~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~-~~~~~~~~~ 232 (376)
|+|..+++.+..... ......|+.....+||+++|+|+|.+|+++||+| +|.+|++...+....... .......+.
T Consensus 173 G~i~~v~~~~~~~~~~~~~~~~~~~~~~~~ggG~l~d~g~H~iD~~~~l~G-~~~~v~a~~~~~~~~~~~~~~~~~~~~~ 251 (393)
T 4fb5_A 173 GRVNHVRVEMDEDFMADPDIFFYWKSELSAGYGALDDFAVHPLSLLWYLFG-HVEAVITDMVKPYPDRPLSEGGRRAVEN 251 (393)
T ss_dssp CSEEEEEEEEECCTTTCTTSCCCGGGCGGGCCBHHHHTTHHHHHHHHHHTC-CEEEEEEEEECCCSEEECTTSSEEECCS
T ss_pred ccccceeeeeccccCCCccccccccccccCCCceecceeeehHHHHHHhcC-CCeEEEEEeeecccCcccccCCcccccc
Confidence 999999986544322 2223455555667899999999999999999999 799998876553222111 011123467
Q ss_pred cccEEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce-eeeecc--cCCccceEEeeccCcccc---
Q 017143 233 IDNAYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI-VRFATR--EAGREDVQTLKAEDDRIE--- 306 (376)
Q Consensus 233 ~d~~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~--- 306 (376)
+|...+.++|++|..+++..++...+.....+++|+|++|++.++..... +..... .....+.......+....
T Consensus 252 ~~~~~~~~~~~~g~~~~~~~s~~~~~~~~~~~~~i~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (393)
T 4fb5_A 252 HDAANVLMRLDGGISAVLMANRAAWGRKGRIALQIYGSKGSILYDQERMNEFELYQAEGPGSEQGFRKILAAPAHRPYDR 331 (393)
T ss_dssp BSEEEEEEEEGGGCEEEEEEESCCTTCSSEEEEEEEESSEEEEEEGGGTTEEEEEESCSCGGGCCCEEEECCTTSTTHHH
T ss_pred cccceeeeecCCCeEEEEEEEeeeccCCCceEEEEEeeeeEEEeccCCcceEEEeccCCCcccccceeeccccccccccc
Confidence 78999999999999999998887777667778999999999988754322 111111 111112222211111100
Q ss_pred ---ccC---CCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEe
Q 017143 307 ---YEG---LHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAI 363 (376)
Q Consensus 307 ---~~~---~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~ 363 (376)
..+ ...+.+..++++|+++|+ ++.++.++++|++++++|++|+++|+++|++|+|
T Consensus 332 ~~~~~~~~~g~~~~~~~e~~~f~~~i~--~~~~~~~~~~d~l~~~~i~~A~~~Sa~~gr~V~l 392 (393)
T 4fb5_A 332 FIPAPGHGLGFNDLKIIECRELIRAIT--GEPSSIVTFKDGLRIEKSVHAMAQSFHERRWIEI 392 (393)
T ss_dssp HCSSTTSCCCTTHHHHHHHHHHHHHHH--CSCCCCCBHHHHHHHHHHHHHHHHHHHTTSCEEC
T ss_pred ccccCCcccchhHHHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEeC
Confidence 001 112334578999999998 7788889999999999999999999999999987
No 5
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=100.00 E-value=5.8e-58 Score=429.30 Aligned_cols=338 Identities=19% Similarity=0.200 Sum_probs=268.6
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
|+ |+++||||||+|.+|+.|++.+.+. ++++|++|||+++++ ++ .++++|++ .|+|++++++++++|+|+|
T Consensus 1 M~-m~~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~~~~~---~~-~a~~~g~~--~~~~~~~ll~~~~~D~V~i 71 (359)
T 3e18_A 1 MS-LKKYQLVIVGYGGMGSYHVTLASAA--DNLEVHGVFDILAEK---RE-AAAQKGLK--IYESYEAVLADEKVDAVLI 71 (359)
T ss_dssp ---CCCEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECSSHHH---HH-HHHTTTCC--BCSCHHHHHHCTTCCEEEE
T ss_pred CC-CCcCcEEEECcCHHHHHHHHHHHhC--CCcEEEEEEcCCHHH---HH-HHHhcCCc--eeCCHHHHhcCCCCCEEEE
Confidence 55 4579999999999999999999988 899999999999874 33 45678875 8999999999989999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKM 160 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 160 (376)
|||+..|++++++||+ +||||+||||++.+.+|+++|.++|+ ++|+.+++++++||.|.++.+|++|++|.||+|..
T Consensus 72 ~tp~~~h~~~~~~al~--aGkhVl~EKP~a~~~~ea~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 148 (359)
T 3e18_A 72 ATPNDSHKELAISALE--AGKHVVCEKPVTMTSEDLLAIMDVAK-RVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEMFH 148 (359)
T ss_dssp CSCGGGHHHHHHHHHH--TTCEEEEESSCCSSHHHHHHHHHHHH-HHTCCEEEECGGGGCHHHHHHHHHHHHTTTSSEEE
T ss_pred cCCcHHHHHHHHHHHH--CCCCEEeeCCCcCCHHHHHHHHHHHH-HhCCeEEEEeeeccCHHHHHHHHHHHcCCCCCeEE
Confidence 9999999999999999 99999999999999999999999995 45999999999999999999999999999999999
Q ss_pred EEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEE
Q 017143 161 VAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIV 240 (376)
Q Consensus 161 ~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l 240 (376)
++.++.... ..+.+|+.+...+||+++|+|+|.+|+++||+|.+|++|++...... ..+++|.+.+++
T Consensus 149 ~~~~~~~~~--~~~~~wr~~~~~gGG~l~d~g~H~iD~~~~l~G~~~~~v~a~~~~~~----------~~~~~d~~~~~l 216 (359)
T 3e18_A 149 LESRVHGAN--GIPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFAL----------GDEVDDGFVTFI 216 (359)
T ss_dssp EEEEEECSS--CSCSSGGGCGGGTCSHHHHTHHHHHHHHHHHCCSCEEEEEEEEECTT----------CCSSCSEEEEEE
T ss_pred EEEEEecCC--CCCCCcccCcCCCCcHHHHHhhHHHHHHHHHhCCCCeEEEEEEEecC----------CCCCCceEEEEE
Confidence 988654432 23467988888899999999999999999999988999999865421 125789999999
Q ss_pred EecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeeccccee--eeecccCCc---------cceEEe-e-ccCcc-c-
Q 017143 241 EFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIV--RFATREAGR---------EDVQTL-K-AEDDR-I- 305 (376)
Q Consensus 241 ~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~--~~~~~~~~~---------~~~~~~-~-~~~~~-~- 305 (376)
+|+||.+++++.++.... ...+++|+|++|++.++...... ......... .+.... . ..... .
T Consensus 217 ~~~~G~~~~i~~s~~~~~--~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 294 (359)
T 3e18_A 217 TFENGITAQIEVGTTNFI--KLPRWYVKGTEGTGIIHDWDLSGEIVKPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNT 294 (359)
T ss_dssp EETTSCEEEEEEESSCSS--CCCSEEEEETTEEEEECSTTCCEEEEEECTTTTTCCCCCEEETTEEESTTSCCCGGGEEE
T ss_pred EECCCCEEEEEEeeccCC--CCCeEEEEeeeEEEEEcCcCccchhhccccccccccCCccccccccccccCCcCCCcccc
Confidence 999999999998775432 23479999999999986532211 111000000 000000 0 00000 0
Q ss_pred cccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhh
Q 017143 306 EYEGLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEV 366 (376)
Q Consensus 306 ~~~~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~ 366 (376)
.......+.+..++++|+++|+ ++.++.++++|++++++|++|+++|+++|++|.|++-
T Consensus 295 ~~~~~~~~~~~~~~~~f~~ai~--~~~~~~~~~~dal~~~~ii~A~~~Sa~~g~~V~l~~~ 353 (359)
T 3e18_A 295 LSLPAPAKLAPSFYNNFVDVLN--NTSEPIVQNEEVYQVLKLIEAIFEAAETNRTVHSIEG 353 (359)
T ss_dssp ECCCCCCCCCSCHHHHHHHHHT--TSSCCSSCHHHHHHHHHHHHHHHHHHHHTSCEEC---
T ss_pred eecCCCCCCHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHHHhhCcEEEEecc
Confidence 0001112455678999999998 7778889999999999999999999999999999764
No 6
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=100.00 E-value=8.1e-58 Score=428.20 Aligned_cols=340 Identities=17% Similarity=0.203 Sum_probs=276.3
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
++++||||||+|.+|..|++.+.+. ++++|++|||++++ +++++++++|++ .|+|++++++++++|+|+||||
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~--~~~~lvav~d~~~~---~~~~~~~~~g~~--~~~~~~~~l~~~~~D~V~i~tp 75 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKS--EKLKLVTCYSRTED---KREKFGKRYNCA--GDATMEALLAREDVEMVIITVP 75 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEECSSHH---HHHHHHHHHTCC--CCSSHHHHHHCSSCCEEEECSC
T ss_pred CCcceEEEEccCHHHHHHHHHHHhC--CCcEEEEEECCCHH---HHHHHHHHcCCC--CcCCHHHHhcCCCCCEEEEeCC
Confidence 4579999999999999999999988 89999999999998 677888899987 6999999999888999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEE
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAI 163 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~ 163 (376)
+..|.+++++||+ +||||+||||++.+.+|+++|.++++ ++|+.+++++++||.|.++.+|++|++|.||+|..+++
T Consensus 76 ~~~h~~~~~~al~--~gk~vl~EKP~~~~~~~~~~l~~~a~-~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~v~~ 152 (354)
T 3db2_A 76 NDKHAEVIEQCAR--SGKHIYVEKPISVSLDHAQRIDQVIK-ETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEVSSIEA 152 (354)
T ss_dssp TTSHHHHHHHHHH--TTCEEEEESSSCSSHHHHHHHHHHHH-HHCCCEEEECGGGGSHHHHHHHHHHHTTTTCCEEEEEE
T ss_pred hHHHHHHHHHHHH--cCCEEEEccCCCCCHHHHHHHHHHHH-HcCCeEEEeechhcCHHHHHHHHHHhcCCCCCeEEEEE
Confidence 9999999999999 99999999999999999999999995 45999999999999999999999999999999999988
Q ss_pred eeccCCc-ccccCccccccc-cCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEE
Q 017143 164 REHRFPF-LVKVNDWNRFNE-NTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVE 241 (376)
Q Consensus 164 ~~~~~~~-~~~~~~w~~~~~-~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~ 241 (376)
.+..... .+.+.+|+.+.. .+||.++|+|+|.+|+++||+| +|.+|++........ .+++|.+.++++
T Consensus 153 ~~~~~~~~~~~~~~w~~~~~~~ggG~l~d~g~H~ld~~~~l~G-~~~~V~a~~~~~~~~---------~~~~d~~~~~l~ 222 (354)
T 3db2_A 153 VFSNERGLELKKGNWRGEPATAPGGPLTQLGVHQIDNLQFLLG-PVARVFNFGKPMYTE---------VENITVNQTLLE 222 (354)
T ss_dssp EEECSGGGTCCTTCGGGCTTTSTTTHHHHTHHHHHHHHHHHHC-CEEEEEEEEECCSCS---------SSSCCEEEEEEE
T ss_pred EEEeccCcccccCCCccccccCCCceeccchhHHHHHHHHHhC-CCeEEEEEeeccCCC---------CCCCceEEEEEE
Confidence 6533211 124567887655 5788999999999999999999 699999987654321 367899999999
Q ss_pred ecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccC---------ccccccCCCC
Q 017143 242 FENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAED---------DRIEYEGLHH 312 (376)
Q Consensus 242 ~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 312 (376)
|+||.++++..++..++ . .+++|+|++|++.++.....+.................+. +.........
T Consensus 223 ~~~G~~~~~~~s~~~~~--~-~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (354)
T 3db2_A 223 FEDGKQAYLGTNWACPG--V-FSINVYGTKANLFYQLDFSWWSNSDVTDEHSTLIKREFASMSDDPDNRILRDVKVDFES 299 (354)
T ss_dssp ETTSCEEEEEEESSSSC--E-EEEEEEESSEEEEEEECGGGTTSTTSGGGGEEEEEEEECC------CCCEEEEECCCCC
T ss_pred ECCCCEEEEEEEeccCC--c-eEEEEEeccEEEEEeCCCcEEEEccCCCccccccccccccccCCCccCCCcccceeccc
Confidence 99999999998887433 2 6899999999999876542222211111000000000000 0000001223
Q ss_pred CCCHH-HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhhh
Q 017143 313 GSSYL-EHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVME 368 (376)
Q Consensus 313 ~~~~~-~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~~ 368 (376)
+.+.. ++++|+++|+ ++.++.++++|+++++++++|+++|+++|++|.|+++++
T Consensus 300 ~~~~~~~~~~f~~ai~--~g~~~~~~~~d~~~~~~i~~a~~~Sa~~g~~V~l~ei~~ 354 (354)
T 3db2_A 300 VDHLRVEVEEVADVIR--NGGETEIGAEASLRNLAVVLAAVKSVHEKRPVEIAEIIG 354 (354)
T ss_dssp CCHHHHHHHHHHHHHH--HCCCCSSCHHHHHHHHHHHHHHHHHHHHTSCEEHHHHHC
T ss_pred ccccHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeHHHhcC
Confidence 55666 9999999999 667788999999999999999999999999999998763
No 7
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=100.00 E-value=5.7e-58 Score=430.22 Aligned_cols=340 Identities=17% Similarity=0.186 Sum_probs=257.4
Q ss_pred CCCCCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 1 MAANDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|+ |+++||||||+|.+|+. |++.+... ++++|++|||+++++ ++++++. ++.|+|+++||+++++|+|+
T Consensus 1 M~-~~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~------~~~~~~~-~~~~~~~~~ll~~~~vD~V~ 70 (362)
T 3fhl_A 1 MS-LEIIKTGLAAFGMSGQVFHAPFISTN--PHFELYKIVERSKEL------SKERYPQ-ASIVRSFKELTEDPEIDLIV 70 (362)
T ss_dssp ---CCCEEEEESCCSHHHHHTTHHHHHHC--TTEEEEEEECSSCCG------GGTTCTT-SEEESCSHHHHTCTTCCEEE
T ss_pred CC-CCceEEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcCCHHH------HHHhCCC-CceECCHHHHhcCCCCCEEE
Confidence 55 45799999999999996 99999888 899999999999873 3456743 36999999999999999999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
||||+..|++++++||+ +|||||||||++.+++|+++|+++|+ ++|+.+++++++||.|.++.+|++|++|.||+|+
T Consensus 71 i~tp~~~H~~~~~~al~--aGkhVl~EKP~a~~~~ea~~l~~~a~-~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~ 147 (362)
T 3fhl_A 71 VNTPDNTHYEYAGMALE--AGKNVVVEKPFTSTTKQGEELIALAK-KKGLMLSVYQNRRWDADFLTVRDILAKSLLGRLV 147 (362)
T ss_dssp ECSCGGGHHHHHHHHHH--TTCEEEEESSCCSSHHHHHHHHHHHH-HHTCCEEEECGGGGSHHHHHHHHHHHTTTTSSEE
T ss_pred EeCChHHHHHHHHHHHH--CCCeEEEecCCCCCHHHHHHHHHHHH-HcCCEEEEEecceeCHHHHHHHHHHHcCCCCCeE
Confidence 99999999999999999 99999999999999999999999995 4599999999999999999999999999999999
Q ss_pred EEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEE
Q 017143 160 MVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
.+++.+.++........|+.+...+||+++|+|+|.+|+++||+| +|++|++....... ..+++|.+.++
T Consensus 148 ~v~~~~~~~~~~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~~~~V~a~~~~~~~---------~~~~~d~~~~~ 217 (362)
T 3fhl_A 148 EYESTFARYRNFIKPNTWKETGESGGGLTYNLGSHLIDQAIQLFG-MPEAVFADLGILRE---------GGKVDDYFIIH 217 (362)
T ss_dssp EEEEEEECBCCC--------------CHHHHTHHHHHHHHHHHHC-CEEEEEEEEECCST---------TCCSCCEEEEE
T ss_pred EEEEEecccCCCCCccccccCCCCCCceeeeehhhHHHHHHHHhC-CCcEEEEEEEEeCC---------CCCcceEEEEE
Confidence 999876544333334459887778999999999999999999999 89999998654321 23678999999
Q ss_pred EEecC---CcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce---eeeeccc----CC---cc--ceEEeeccCc-
Q 017143 240 VEFEN---GSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI---VRFATRE----AG---RE--DVQTLKAEDD- 303 (376)
Q Consensus 240 l~~~~---G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~---~~~~~~~----~~---~~--~~~~~~~~~~- 303 (376)
|+|+| |..+++.+++..+. ...+++|+|++|++.++..+.. +...... .+ .. +.......+.
T Consensus 218 l~~~~~~~G~~~~~~~s~~~~~--~~~~~~i~G~~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 295 (362)
T 3fhl_A 218 LLHPSLAPNVKITLKASYLMRE--AEPRFALHGTLGSYVKYGVDKQEAALLAGEIPERPNWGEESEQEWGLLHTEINGKE 295 (362)
T ss_dssp EEEETTSTTSEEEEEEESBCSS--CCCSEEEEESSCEEEECCC---------------CCCSCCCGGGCEEEEEEETTEE
T ss_pred EEECCCCCCeEEEEEEEeccCC--CCCEEEEEECCcEEEEeCCCccHHHHhcCCCCCCCccCCCchhhCcEEEecCCCcc
Confidence 99999 99999998886543 2347999999999987532211 1100000 00 00 0000000000
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhh
Q 017143 304 RIEYEGLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVM 367 (376)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~ 367 (376)
.........+.+..++++|+++|+ ++.++.++++|++++++|++|+++|+++|++|.++.-.
T Consensus 296 ~~~~~~~~~~~~~~~~~~f~~ai~--~g~~~~~~~~dal~~~~ii~a~~~Sa~~g~~V~l~~~~ 357 (362)
T 3fhl_A 296 ICRKYPGIAGNYGGFYQNIYEHLC--LGQPLETHAQDILNVIRIIEAAYQSHRENKIVNLKEGH 357 (362)
T ss_dssp EEEEECCCCCCTTHHHHHHHHHHH--HCCCCSCBTHHHHHHHHHHHHHHHHHHHTSCEEC----
T ss_pred eeeecCCCCCCHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHhhhhcCCEEEecccc
Confidence 000111223567789999999999 66778899999999999999999999999999997643
No 8
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=100.00 E-value=6.9e-58 Score=425.70 Aligned_cols=325 Identities=21% Similarity=0.266 Sum_probs=267.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh-hhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL-QSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
|+||||||+|.++..|++.+ . ++++|++|||+++ ++.+++.+.+++||++++.|+|+++||+++++|+|+|+||+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l--~--~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~ 77 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL--D--EECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVF 77 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC--C--TTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSH
T ss_pred ceEEEEEccchhHHHHHHhc--C--CCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 59999999999999999888 4 8999999999998 56566777777888744799999999999889999999999
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeE--EEEeeccccCHHHHHHHHHHHcCCCCceEEEE
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDIL--VQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVA 162 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~--~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~ 162 (376)
..|++++++||+ +|||||||||++.+.+|+++|.+++++ +|+. +++++++||.|.++.+|++|++|.||+|+.++
T Consensus 78 ~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~~-~g~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~i~ 154 (337)
T 3ip3_A 78 SLNGKILLEALE--RKIHAFVEKPIATTFEDLEKIRSVYQK-VRNEVFFTAMFGIRYRPHFLTAKKLVSEGAVGEIRLVN 154 (337)
T ss_dssp HHHHHHHHHHHH--TTCEEEECSSSCSSHHHHHHHHHHHHH-HTTTCCEEECCGGGGSHHHHHHHHHHHHTTTSSEEEEE
T ss_pred chHHHHHHHHHH--CCCcEEEeCCCCCCHHHHHHHHHHHHH-hCCceEEEecccccCCHHHHHHHHHHhcCCccceEEEE
Confidence 999999999999 999999999999999999999999954 5888 99999999999999999999999999999998
Q ss_pred EeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEe
Q 017143 163 IREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEF 242 (376)
Q Consensus 163 ~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~ 242 (376)
+.+... +...+.|+.+...+||.++|+|+|.+|+++||+|.+|.+|++........ ...+++|.+.++++|
T Consensus 155 ~~~~~~--~~~~~~~~~~~~~~gG~l~d~g~H~iD~~~~l~G~~~~~V~a~~~~~~~~-------~~~~~~d~~~~~l~~ 225 (337)
T 3ip3_A 155 TQKSYK--LGQRPDFYKKRETYGGTIPWVGIHAIDWIHWITGKKFLSVYATHSRLHNS-------GHGELETTALCHFTL 225 (337)
T ss_dssp EEEEBC--CCSCCGGGGSHHHHCCHHHHTTHHHHHHHHHHHCCCEEEEEEEEECTTCT-------TCTTCCSEEEEEEEE
T ss_pred EEeccc--CCCCcchhhcccccCCchhhcchHHHHHHHHhcCCCceEEEEEecccccC-------CCCCcceEEEEEEEE
Confidence 864332 12235676666678999999999999999999997799999986553221 123678999999999
Q ss_pred cCCcEEEEEEEEeecCC---CCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHH
Q 017143 243 ENGSRGMLDLCMFAEGS---KNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEH 319 (376)
Q Consensus 243 ~~G~~~~l~~~~~~~~~---~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (376)
+||.++++..+|..+.. ....+++|+|++|++.+.... +..... .+..... ...+..++
T Consensus 226 ~~G~~~~~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~--~~~~~~----~~~~~~~------------~~~~~~~~ 287 (337)
T 3ip3_A 226 ENEVFASLSIDYLRPQGAPTHDDDRMRIVGTRGIVEVINER--VFLTDE----KGHREVP------------LVEKGQIF 287 (337)
T ss_dssp GGGEEEEEEEESCCCTTSSSSBCCEEEEEESSCEEEEETTE--EEEEET----TEEEEEC------------CCCCCCHH
T ss_pred CCCcEEEEEEEEEcCCCCCCCCCcEEEEEecceEEEEeCCE--EEEecC----CCceecc------------CCchHHHH
Confidence 99999999998865432 245589999999999975432 222111 1111111 12234589
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhh
Q 017143 320 LNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEV 366 (376)
Q Consensus 320 ~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~ 366 (376)
++|+++|+ ++.++.++++++++++++++|+++|+++|++|.++..
T Consensus 288 ~~f~~~i~--~~~~~~~~~~d~~~~~~i~~a~~~Sa~~g~~V~~~~~ 332 (337)
T 3ip3_A 288 EDFLREIR--GQGKCMVTPEDSILTTEIALKARLSADTGQIVLIEGH 332 (337)
T ss_dssp HHHHHHHT--TSSCCSSCHHHHHHHHHHHHHHHHHHHHTSCEEC---
T ss_pred HHHHHHhc--CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeecc
Confidence 99999998 7778889999999999999999999999999998654
No 9
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=100.00 E-value=2.5e-57 Score=424.93 Aligned_cols=340 Identities=19% Similarity=0.266 Sum_probs=272.4
Q ss_pred CCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 2 AANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 2 ~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
..++++||||||+|.+|..|++.+.+.. +++++++|||++++ +++++++++|++ .|+|++++++++++|+|+||
T Consensus 9 ~~~~~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~~~~---~~~~~~~~~~~~--~~~~~~~ll~~~~~D~V~i~ 82 (354)
T 3q2i_A 9 ITDRKIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDIDPA---ALKAAVERTGAR--GHASLTDMLAQTDADIVILT 82 (354)
T ss_dssp CCSSCEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECSSHH---HHHHHHHHHCCE--EESCHHHHHHHCCCSEEEEC
T ss_pred CCCCcceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcCCHH---HHHHHHHHcCCc--eeCCHHHHhcCCCCCEEEEC
Confidence 3346899999999999999999988762 58999999999998 677888889964 99999999998889999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEE
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMV 161 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~ 161 (376)
||+..|.+++++|++ +||||+||||++.+.+++++|.++++ +.|+.+++++++||.|.++++|++|++|.||+|..+
T Consensus 83 tp~~~h~~~~~~al~--~gk~v~~EKP~a~~~~~~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~v 159 (354)
T 3q2i_A 83 TPSGLHPTQSIECSE--AGFHVMTEKPMATRWEDGLEMVKAAD-KAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMV 159 (354)
T ss_dssp SCGGGHHHHHHHHHH--TTCEEEECSSSCSSHHHHHHHHHHHH-HHTCCEEECCGGGGSHHHHHHHHHHHTTTTCSEEEE
T ss_pred CCcHHHHHHHHHHHH--CCCCEEEeCCCcCCHHHHHHHHHHHH-HhCCeEEEEEcccCCHHHHHHHHHHhcCCCCceEEE
Confidence 999999999999999 89999999999999999999999995 459999999999999999999999999999999999
Q ss_pred EEeeccC--CcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEE
Q 017143 162 AIREHRF--PFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 162 ~~~~~~~--~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
++.+... ..++...+|+.....+||.++|+|+|.+|+++||+| +|++|++....... ..+++|.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G-~~~~v~a~~~~~~~---------~~~~~d~~~~~ 229 (354)
T 3q2i_A 160 NVNVFWTRPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIG-PVESVQAYTATLAR---------NIEVEDTGTVS 229 (354)
T ss_dssp EEEEECBCCHHHHHTSTTTTCTTTTCCCCCCCTHHHHHHHHHHHC-CEEEEEEEEECSSS---------SSSSCSEEEEE
T ss_pred EEEEEEecCchhccccCccccccCCCchhhhhhhHHHHHHHHhcC-CceEEEEEeeccCC---------CCCccceeEEE
Confidence 8764322 122334578877777899999999999999999999 89999998754321 23678999999
Q ss_pred EEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeeccc-ceeeeecccCCccceEEeeccCccccccCCCCCCCHHH
Q 017143 240 VEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPE-SIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLE 318 (376)
Q Consensus 240 l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (376)
++|+||.+++++.++...+.....+++|+|++|++.++... ..+..+............. .............+..+
T Consensus 230 l~~~~G~~~~~~~s~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 307 (354)
T 3q2i_A 230 VKWRSGALGSMNVTMLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIK--DASYATTSVYGFGHPLY 307 (354)
T ss_dssp EEETTSCEEEEEEESBCSSSCCEEEEEEEETTEEEEEETTTTCEEEEEEESSCCGGGGGHH--HHC-------CCSHHHH
T ss_pred EEECCCCEEEEEEEeeecCCCCCcEEEEEeccEEEEECCcccccceeeeecccCCcccccc--ccccCCcccCCccHHHH
Confidence 99999999999998876544456689999999999987421 1111111000000000000 00000000011123578
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEeh
Q 017143 319 HLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIE 364 (376)
Q Consensus 319 l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~ 364 (376)
+++|+++|+ ++.++.++++|+++++++++|+++|+++|++|.||
T Consensus 308 ~~~f~~~i~--~~~~~~~~~~d~~~~~~i~~a~~~Sa~~g~~V~l~ 351 (354)
T 3q2i_A 308 YDNVIKTMR--GEATPETDGREGLKSLELLIAMYLSARDGRRVSLP 351 (354)
T ss_dssp HHHHHHHHT--TSCCCSSBHHHHHHHHHHHHHHHHHHHHTSCEESC
T ss_pred HHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEeCC
Confidence 999999998 77788899999999999999999999999999985
No 10
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=6.3e-57 Score=419.43 Aligned_cols=324 Identities=24% Similarity=0.316 Sum_probs=267.3
Q ss_pred CCCCCceeEEEEeCC-hhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 1 MAANDTVKYGIIGMG-MMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 1 m~~~~~~~v~iiG~G-~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|.+++++||||||+| .+|+.|++.+.+.. ++++|++|||++++ ++++++++|+++ ..|+|+++||+++++|+|+
T Consensus 13 ~~~~~~irvgiIG~G~~~g~~~~~~l~~~~-~~~~lvav~d~~~~---~~~~~a~~~~~~-~~~~~~~~ll~~~~vD~V~ 87 (340)
T 1zh8_A 13 MKPLRKIRLGIVGCGIAARELHLPALKNLS-HLFEITAVTSRTRS---HAEEFAKMVGNP-AVFDSYEELLESGLVDAVD 87 (340)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTTT-TTEEEEEEECSSHH---HHHHHHHHHSSC-EEESCHHHHHHSSCCSEEE
T ss_pred cCCCCceeEEEEecCHHHHHHHHHHHHhCC-CceEEEEEEcCCHH---HHHHHHHHhCCC-cccCCHHHHhcCCCCCEEE
Confidence 556678999999999 79999999998752 58999999999998 677888999985 7899999999998999999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
|+||+..|++++++||+ +|||||||||++.+.+|+++|.++++ ++|+.+++++++||.|.++.+|++|++|.||+|.
T Consensus 88 i~tp~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~-~~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~ 164 (340)
T 1zh8_A 88 LTLPVELNLPFIEKALR--KGVHVICEKPISTDVETGKKVVELSE-KSEKTVYIAENFRHVPAFWKAKELVESGAIGDPV 164 (340)
T ss_dssp ECCCGGGHHHHHHHHHH--TTCEEEEESSSSSSHHHHHHHHHHHH-HCSSCEEEECGGGGCHHHHHHHHHHHTTTTSSEE
T ss_pred EeCCchHHHHHHHHHHH--CCCcEEEeCCCCCCHHHHHHHHHHHH-HcCCeEEEEecccCCHHHHHHHHHHhcCCCCCcE
Confidence 99999999999999999 99999999999999999999999994 5599999999999999999999999999999999
Q ss_pred EEEEeeccCC---cccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccE
Q 017143 160 MVAIREHRFP---FLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNA 236 (376)
Q Consensus 160 ~~~~~~~~~~---~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~ 236 (376)
.+++.+.... ..+...+|+.+...+||.++|+|+|.+|+++|++| +|.+|++....... ..+.+|.+
T Consensus 165 ~v~~~~~~~~~~~~~~~~~~w~~~~~~~GG~l~d~g~H~ld~~~~l~G-~~~~V~a~~~~~~~---------~~~~~D~~ 234 (340)
T 1zh8_A 165 FMNWQIWVGMDENNKYVHTDWRKKPKHVGGFLSDGGVHHAAAMRLILG-EIEWISAVAKDLSP---------LLGGMDFL 234 (340)
T ss_dssp EEEEEEEBCCCTTCSGGGCHHHHTTCSTTTHHHHHHHHHHHHHHHHHC-CEEEEEEEEECCCT---------TSSSCCEE
T ss_pred EEEEEEeccccccCCCCCcCceECCcCCCceeeeccHHHHHHHHHhhC-CCeEEEEEEEccCC---------CCCCcceE
Confidence 9988543221 12234578877777899999999999999999999 89999998654211 12578999
Q ss_pred EEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCH
Q 017143 237 YVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSY 316 (376)
Q Consensus 237 ~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (376)
.++++|+||..+++..++..+.. . +++|+|++|++.+....... . ...+. . ...+.+.
T Consensus 235 ~~~l~~~~G~~~~~~~s~~~~~~--~-~~~i~G~~G~i~~~~~~~~~---------~-~~~~~-------~--~~~~~~~ 292 (340)
T 1zh8_A 235 SSIFEFENGTVGNYTISYSLKGN--E-RFEITGTKGKISISWDKIVL---------N-EEEMK-------V--PQENSYQ 292 (340)
T ss_dssp EEEEEETTSCEEEEEEESSSBCC--C-EEEEEESSCEEEEETTEEEE---------T-TEEEE-------C--CCCCHHH
T ss_pred EEEEEeCCCCEEEEEEEeeecCC--C-EEEEEeCcEEEEEEeCCccc---------c-ceeec-------C--CCcccHH
Confidence 99999999999999988765443 2 89999999999873311000 0 00111 1 1124566
Q ss_pred HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhh
Q 017143 317 LEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVM 367 (376)
Q Consensus 317 ~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~ 367 (376)
.++++|+++|++ +...+.++++++++++++++|+++| +|++|.+++++
T Consensus 293 ~~~~~f~~~i~~-g~~~p~~~~~~~l~~~~i~~a~~~S--~g~~V~l~~~~ 340 (340)
T 1zh8_A 293 KEFEDFYQVVAE-GKPNDLGSPVQALKDLAFIEACVRS--AGNKVFVSSLL 340 (340)
T ss_dssp HHHHHHHHHHHS-CCCCSSSCHHHHHHHHHHHHHHHHH--TTSCEEGGGGC
T ss_pred HHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHHHHHHc--CCCEEeCcccC
Confidence 899999999983 2444668999999999999999999 99999998863
No 11
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=100.00 E-value=4.4e-57 Score=427.76 Aligned_cols=352 Identities=17% Similarity=0.230 Sum_probs=276.6
Q ss_pred CCceeEEEEe-CChhhHH-HH----HHhhhhcCCCcEEE---------EEeCCChhhHHHHHHHHHhcCCCCCccCCHHH
Q 017143 4 NDTVKYGIIG-MGMMGRE-HF----INLHHLRSQGVSVV---------CIADPHLQSRQQALKLANAFDWPLKVFPGHQE 68 (376)
Q Consensus 4 ~~~~~v~iiG-~G~~g~~-~~----~~~~~~~~~~~~~~---------~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (376)
++++|||||| +|.+|.. |+ .++.+. ++++++ +|||++++ ++++++++||++ +.|+|+++
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~--~~~~l~~~~~~~~~~av~~~~~~---~a~~~a~~~~~~-~~~~~~~~ 77 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ--GGVRLKNGDRIMPDPILVGRSAE---KVEALAKRFNIA-RWTTDLDA 77 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH--TSEECTTSCEEEEEEEEECSSSH---HHHHHHHHTTCC-CEESCHHH
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc--CceeecCCcccceeeEEEcCCHH---HHHHHHHHhCCC-cccCCHHH
Confidence 4689999999 9999998 99 888887 655544 79999998 788899999986 78999999
Q ss_pred HhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHH
Q 017143 69 LLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQ 148 (376)
Q Consensus 69 ~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~ 148 (376)
||+++++|+|+|+||+..|++++++||+ +||||+||||++.+.+|+++|.++|+ ++|+.+++++++||.|.++.+|+
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~al~--~Gk~V~~EKP~a~~~~~~~~l~~~a~-~~~~~~~v~~~~r~~p~~~~~~~ 154 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQAIN--AGKHVYCEKPIATNFEEALEVVKLAN-SKGVKHGTVQDKLFLPGLKKIAF 154 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHHHT--TTCEEEECSCSCSSHHHHHHHHHHHH-HTTCCEEECCGGGGSHHHHHHHH
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHHHH--CCCeEEEcCCCCCCHHHHHHHHHHHH-HcCCeEEEEeccccCHHHHHHHH
Confidence 9999999999999999999999999999 99999999999999999999999995 45999999999999999999999
Q ss_pred HHHcCCCCceEEEEEeeccCC-----cccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCcc
Q 017143 149 IVKSGSIGQVKMVAIREHRFP-----FLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDE 223 (376)
Q Consensus 149 ~i~~g~iG~i~~~~~~~~~~~-----~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~ 223 (376)
+|++|.||+|..+++.+..+. ....+.+|+.+...+||+++|+|+|.+|+++||+| +|.+|++...........
T Consensus 155 ~i~~g~iG~i~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~~~~v~a~~~~~~~~~~~ 233 (383)
T 3oqb_A 155 LRDSGFFGRILSVRGEFGYWVFEGGWQEAQRPSWNYRDEDGGGIILDMVCHWRYVLDNLFG-NVQSVVCIGNTDIPERFD 233 (383)
T ss_dssp HHHTTTTSSEEEEEEEEECCCCCSSSSCCSSCGGGGCTTTTCCHHHHHHHHHHHHHHHHTC-CEEEEEEEEECSCSEEEC
T ss_pred HHHcCCCCCcEEEEEEeccccccccccccCCCCcccccccCCceeeehhhHHHHHHHHHcC-CCeEEEEEEeeccccccc
Confidence 999999999999998643211 11234578877778999999999999999999999 899999987654321110
Q ss_pred ccC-CCCCcccccEEEEEEecCCcEEEEEEEEeecCCC-CceEEEEEecCCeeeeecccceeeeecccCCc--cc--eEE
Q 017143 224 MYN-GKVPDIIDNAYVIVEFENGSRGMLDLCMFAEGSK-NEQEIVVVGNTGKGEAFVPESIVRFATREAGR--ED--VQT 297 (376)
Q Consensus 224 ~~~-~~~~~~~d~~~~~l~~~~G~~~~l~~~~~~~~~~-~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~--~~--~~~ 297 (376)
..+ ....+++|.+.++++|+||.++++..++..+... ...+++|+|++|++.++............... .. ...
T Consensus 234 ~~g~~~~~~~~D~~~~~l~~~~G~~~~~~~s~~~~~~~~~~~~~~i~Gt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (383)
T 3oqb_A 234 EQGKKYKATADDSAYATFQLEGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVAGLSDCMIQARQATPRPVWNPDEKRL 313 (383)
T ss_dssp TTSCEEECCSCCEEEEEEEETTTEEEEEEEESSCCCCSSSSEEEEEEESSEEEEECSSCEEEEEGGGCCCCCCCC----C
T ss_pred CCCceeccccCCcEEEEEEeCCCCEEEEEEEeecccCCCCceEEEEEecccEEEEecccccccccCCCCccccCCCCCcc
Confidence 000 0123688999999999999999999988665433 34589999999999876543332221110000 00 000
Q ss_pred eeccCc--cccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhh
Q 017143 298 LKAEDD--RIEYEGLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVM 367 (376)
Q Consensus 298 ~~~~~~--~~~~~~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~ 367 (376)
...... .........+.+..++++|+++|+ ++.++.++++|+++++++++|+++|+++|++|.+++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~ai~--~g~~~~~~~~d~~~~~~i~~a~~~Sa~~g~~V~l~~~~ 383 (383)
T 3oqb_A 314 HDFYGDWQKLPDNVSYDNGFKEQWEMFIRHVY--EDAPYKFTLLEGAKGVQLAECALKSWKERRWIDVAPIK 383 (383)
T ss_dssp CCGGGGSEECCCCSCCCCHHHHHHHHHHHHHH--HCCCCCCSHHHHHHHHHHHHHHHHHHHHTBCEECCCC-
T ss_pred cccccccccCCCCCCccchHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHHhhCCeEeccCCC
Confidence 000000 000001223456689999999999 66778899999999999999999999999999998864
No 12
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.7e-56 Score=425.17 Aligned_cols=344 Identities=20% Similarity=0.263 Sum_probs=265.9
Q ss_pred CCCceeEEEEeCCh---hhHHHHHHhhhhcCCCcEEEE-EeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhC-----
Q 017143 3 ANDTVKYGIIGMGM---MGREHFINLHHLRSQGVSVVC-IADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDS----- 72 (376)
Q Consensus 3 ~~~~~~v~iiG~G~---~g~~~~~~~~~~~~~~~~~~~-v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~----- 72 (376)
.|+++||||||+|. +|..|++++... ++++|++ |||++++ +++++++++|++ .+.|+|+++||++
T Consensus 9 ~m~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~~~~---~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~ 83 (398)
T 3dty_A 9 IPQPIRWAMVGGGSQSQIGYIHRCAALRD--NTFVLVAGAFDIDPI---RGSAFGEQLGVDSERCYADYLSMFEQEARRA 83 (398)
T ss_dssp SCSCEEEEEEECCTTCSSHHHHHHHHHGG--GSEEEEEEECCSSHH---HHHHHHHHTTCCGGGBCSSHHHHHHHHTTCT
T ss_pred ccCcceEEEEcCCccchhHHHHHHHHhhC--CCeEEEEEEeCCCHH---HHHHHHHHhCCCcceeeCCHHHHHhcccccC
Confidence 35789999999999 999999999887 7899998 8999998 788899999985 3689999999997
Q ss_pred CCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHc
Q 017143 73 GLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKS 152 (376)
Q Consensus 73 ~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 152 (376)
+++|+|+|+||+..|++++++||+ +|||||||||++.+++|+++|+++++ ++|+.+++++++||.|.++++|++|++
T Consensus 84 ~~vD~V~i~tp~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~k~~i~~ 160 (398)
T 3dty_A 84 DGIQAVSIATPNGTHYSITKAALE--AGLHVVCEKPLCFTVEQAENLRELSH-KHNRIVGVTYGYAGHQLIEQAREMIAA 160 (398)
T ss_dssp TCCSEEEEESCGGGHHHHHHHHHH--TTCEEEECSCSCSCHHHHHHHHHHHH-HTTCCEEECCGGGGSHHHHHHHHHHHT
T ss_pred CCCCEEEECCCcHHHHHHHHHHHH--CCCeEEEeCCCcCCHHHHHHHHHHHH-HcCCeEEEEecccCCHHHHHHHHHHhc
Confidence 679999999999999999999999 99999999999999999999999995 459999999999999999999999999
Q ss_pred CCCCceEEEEEeeccC--Ccc----cccCccccccccCC--cccccccccHHHHHHHH-hCCCCeEEEEecccccccCcc
Q 017143 153 GSIGQVKMVAIREHRF--PFL----VKVNDWNRFNENTG--GTLVEKCCHFFDLMRLF-VGSNPMRVMASGAVDVNHKDE 223 (376)
Q Consensus 153 g~iG~i~~~~~~~~~~--~~~----~~~~~w~~~~~~~g--G~l~d~g~H~ld~~~~l-~G~~~~~V~a~~~~~~~~~~~ 223 (376)
|.||+|+.+++.+... ... .....|+.+...+| |+++|+|+|.+|+++|| +|.+|++|++.........
T Consensus 161 G~iG~i~~v~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~idl~~~l~~G~~~~~V~a~~~~~~~~~-- 238 (398)
T 3dty_A 161 GELGDVRMVHMQFAHGFHSAPVEAQSQATQWRVDPRQAGPSYVLGDVGTHPLYLSEVMLPDLKIKRLMCSRQSFVASR-- 238 (398)
T ss_dssp TTTCSEEEEEEEEECCTTCC------------------CCCSHHHHTTHHHHHHHHHHCTTCCEEEEEEEEECSSGGG--
T ss_pred CCCCCeEEEEEEEecccccCccccccCCCCcccCHHHcCCccHHHHHHHHHHHHHHHHhcCCCcEEEEEEeEeecCCC--
Confidence 9999999999875321 111 23467887766554 89999999999999999 9988999999876543211
Q ss_pred ccCCCCCcccccEEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccc-eeeeecccCCccceEEeeccC
Q 017143 224 MYNGKVPDIIDNAYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPES-IVRFATREAGREDVQTLKAED 302 (376)
Q Consensus 224 ~~~~~~~~~~d~~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 302 (376)
.+++|.+.++++|+||+++++..++..++.....+++|+|++|++.++.... .+.+... .+. ...+....
T Consensus 239 ------~~~~D~~~~~l~~~~G~~~~~~~s~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~l~~~~~-~~~--~~~~~~~~ 309 (398)
T 3dty_A 239 ------APLEDNAYTLMEYEGGAMGMVWSSAVNAGSMHGQKIRVIGSRASLEWWDERPNQLSFEVQ-GQP--AQILERGM 309 (398)
T ss_dssp ------TTSCSEEEEEEEETTSCEEEEEEESCCTTCSCCEEEEEEESSEEEEEETTSTTEEEEEET-TSC--EEEEETTC
T ss_pred ------CCcceEEEEEEEECCCCEEEEEEeccccCCCCCcEEEEEecceEEEEecCCCCEEEEEEC-CCC--cEEEEcCC
Confidence 1478999999999999999999998876666667999999999999875332 2222211 111 11111110
Q ss_pred cc--------ccccCCCC----CCCHHHHHHHHHHHHh--cCCC-----CCCCCHHHHHHHHHHHHHHHHHHHcCCEEEe
Q 017143 303 DR--------IEYEGLHH----GSSYLEHLNFLSAIRA--KGAK-----VPAVDLQDGLISVAIGVAAQLSIEKGRFIAI 363 (376)
Q Consensus 303 ~~--------~~~~~~~~----~~~~~~l~~f~~~i~~--~~~~-----~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~ 363 (376)
.. ......+. +.+..++++|+++|+. .+.. .+.++++|+++++++++|+++|+++|++|.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~~~g~~~~p~~~~~~~~~dg~~~~~i~eA~~~S~~~g~~v~~ 389 (398)
T 3dty_A 310 GYLHPNALIDDRIGGGHPEGLFEAWANLYYRFALAMDATDRSDTQALSAVRYPGIDAGVEGVRWVERCVLSADNDSIWVA 389 (398)
T ss_dssp TTSCGGGTTTCCSCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CCCChhhhhhcccCCCCcCcHHHHHHHHHHHHHHHHHhhhCCCCCccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 00 01111111 1234788999999982 1332 1478999999999999999999999998886
Q ss_pred hh
Q 017143 364 EE 365 (376)
Q Consensus 364 ~~ 365 (376)
++
T Consensus 390 ~~ 391 (398)
T 3dty_A 390 YE 391 (398)
T ss_dssp SS
T ss_pred ec
Confidence 53
No 13
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=100.00 E-value=1.5e-56 Score=415.42 Aligned_cols=322 Identities=18% Similarity=0.205 Sum_probs=262.3
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
|+ |+++||||||+|.+|..|++.+... +++++++|||++++ +++++++++|++ +.|+|++++++++++|+|+|
T Consensus 1 M~-m~~~rigiiG~G~ig~~~~~~l~~~--~~~~~~av~d~~~~---~~~~~a~~~~~~-~~~~~~~~ll~~~~~D~V~i 73 (329)
T 3evn_A 1 MS-LSKVRYGVVSTAKVAPRFIEGVRLA--GNGEVVAVSSRTLE---SAQAFANKYHLP-KAYDKLEDMLADESIDVIYV 73 (329)
T ss_dssp -----CEEEEEEBCCTTHHHHHHHHHHH--CSEEEEEEECSCSS---TTCC---CCCCS-CEESCHHHHHTCTTCCEEEE
T ss_pred CC-CCceEEEEEechHHHHHHHHHHHhC--CCcEEEEEEcCCHH---HHHHHHHHcCCC-cccCCHHHHhcCCCCCEEEE
Confidence 54 4579999999999999999999988 89999999999998 577888899986 78999999999888999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKM 160 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 160 (376)
+||+..|++++++||+ +||||+||||++.+.+|+++|.+++++ +|+.+++++++||.|.++.+|++|++|.||+|..
T Consensus 74 ~tp~~~h~~~~~~al~--aGk~Vl~EKP~a~~~~e~~~l~~~a~~-~~~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~ 150 (329)
T 3evn_A 74 ATINQDHYKVAKAALL--AGKHVLVEKPFTLTYDQANELFALAES-CNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVIS 150 (329)
T ss_dssp CSCGGGHHHHHHHHHH--TTCEEEEESSCCSSHHHHHHHHHHHHH-TTCCEEEECSSCSSHHHHHHHHHHHTTTTCSEEE
T ss_pred CCCcHHHHHHHHHHHH--CCCeEEEccCCcCCHHHHHHHHHHHHH-cCCEEEEEEcccCCHHHHHHHHHHhCCCCCCeEE
Confidence 9999999999999999 999999999999999999999999955 5999999999999999999999999999999999
Q ss_pred EEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEE
Q 017143 161 VAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIV 240 (376)
Q Consensus 161 ~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l 240 (376)
+++.+.. +. .....|+.+...+||+++|+|+|.+|+++||+|.++.+|.+..... ..+++|.+.+++
T Consensus 151 v~~~~~~-~~-~~~~~w~~~~~~gGG~l~d~g~H~id~~~~l~G~~~~~v~~~~~~~-----------~~~~~d~~~~~l 217 (329)
T 3evn_A 151 ISSTTAY-PN-IDHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTATFP-----------KGQSDSQSKLLL 217 (329)
T ss_dssp EEEEEEC-TT-GGGSTTTTCGGGTCSHHHHHHHHHHHHHHHHTTCCEEEEEEEEECC-----------TTSCCSEEEEEE
T ss_pred EEEEecc-CC-CCCcccccCcccCCcHHHHHHHHHHHHHHHHhCCCceEEEEEEEeC-----------CCCcceEEEEEE
Confidence 9986543 22 3456888877889999999999999999999997788888876321 126789999999
Q ss_pred EecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce--eeeecccCCccceEEeeccCccccccCCCCCCCHHH
Q 017143 241 EFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI--VRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLE 318 (376)
Q Consensus 241 ~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (376)
+|+||.++++.+++.. ....+++|+|++|++.++..... ..... ..+. ...+ .....+.+..+
T Consensus 218 ~~~~G~~~~~~~s~~~---~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~-~~g~--~~~~---------~~~~~~~~~~e 282 (329)
T 3evn_A 218 QLSNGVLVDIFLTTRL---NLPHEMIIYGTEGRLIIPHFWKTTHAKLVR-NDTS--ARTI---------QVDMVSDFEKE 282 (329)
T ss_dssp EETTSCEEEEEEESSS---CCCCEEEEEETTEEEEEETTTSCSEEEEEE-SSSC--EEEE---------ECCCSCTTHHH
T ss_pred EECCCCEEEEEEEccC---CCCCEEEEEeCceEEEECCCCCCCeEEEEE-CCCe--eEEE---------EcCCCCCCHHH
Confidence 9999999999887643 23458999999999998742211 11111 1111 1111 11123567889
Q ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCE
Q 017143 319 HLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRF 360 (376)
Q Consensus 319 l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~ 360 (376)
+++|+++|+++..+.+.++++++++++++++++++|++++++
T Consensus 283 ~~~f~~~i~~g~~~~~~~~~~~~l~~~~ii~ai~~s~~~~~~ 324 (329)
T 3evn_A 283 AYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGKEGH 324 (329)
T ss_dssp HHHHHHHHHTTCSSCSSSCHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccc
Confidence 999999998422236789999999999999999999998764
No 14
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=100.00 E-value=2.8e-56 Score=413.51 Aligned_cols=323 Identities=16% Similarity=0.210 Sum_probs=266.8
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
|+ |+++||||||+|.+|..|++.+.+. +++++++|||++++ +++++++++|++ +.|+|++++++++++|+|+|
T Consensus 1 M~-m~~~~igiiG~G~~g~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~~~~~~~~-~~~~~~~~ll~~~~~D~V~i 73 (330)
T 3e9m_A 1 MS-LDKIRYGIMSTAQIVPRFVAGLRES--AQAEVRGIASRRLE---NAQKMAKELAIP-VAYGSYEELCKDETIDIIYI 73 (330)
T ss_dssp ---CCCEEEEECSCCTTHHHHHHHHHHS--SSEEEEEEBCSSSH---HHHHHHHHTTCC-CCBSSHHHHHHCTTCSEEEE
T ss_pred CC-CCeEEEEEECchHHHHHHHHHHHhC--CCcEEEEEEeCCHH---HHHHHHHHcCCC-ceeCCHHHHhcCCCCCEEEE
Confidence 55 3579999999999999999999998 89999999999988 678888999986 79999999999888999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKM 160 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 160 (376)
|||+..|.+++++||+ +||||+||||++.+.+|+++|.++++ ++|+.+++++++||.|.++.+|++|++|.||+|+.
T Consensus 74 ~tp~~~h~~~~~~al~--~gk~vl~EKP~~~~~~e~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 150 (330)
T 3e9m_A 74 PTYNQGHYSAAKLALS--QGKPVLLEKPFTLNAAEAEELFAIAQ-EQGVFLMEAQKSVFLPITQKVKATIQEGGLGEILW 150 (330)
T ss_dssp CCCGGGHHHHHHHHHH--TTCCEEECSSCCSSHHHHHHHHHHHH-HTTCCEEECCSGGGCHHHHHHHHHHHTTTTCSEEE
T ss_pred cCCCHHHHHHHHHHHH--CCCeEEEeCCCCCCHHHHHHHHHHHH-HcCCeEEEEEhhhhCHHHHHHHHHHhCCCCCCeEE
Confidence 9999999999999999 89999999999999999999999995 45999999999999999999999999999999999
Q ss_pred EEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEE
Q 017143 161 VAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIV 240 (376)
Q Consensus 161 ~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l 240 (376)
+++.+.... ..+.+|+.+...+||.++|+|+|.+|+++||+|.+|.+|++..... ..+++|.+.+++
T Consensus 151 i~~~~~~~~--~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G~~~~~v~a~~~~~-----------~~~~~d~~~~~l 217 (330)
T 3e9m_A 151 VQSVTAYPN--VDHIPWFYSREAGGGALHGSGSYPLQYLQYVLGKEIQEVTGTATYQ-----------QGATDSQCNLAL 217 (330)
T ss_dssp EEEEEEESC--CTTCGGGGCTTTTCSHHHHHSHHHHHHHHHHHTCCEEEEEEEEEEC-----------SSSCEEEEEEEE
T ss_pred EEEEecccC--CCCcCcccCcccCCCHHHHhhHHHHHHHHHHhCCCceEEEEEEEeC-----------CCCcceEEEEEE
Confidence 998654321 3457888887789999999999999999999998899999986321 126789999999
Q ss_pred EecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccc--eeeeecccCCccceEEeeccCccccccCCCCCCCHHH
Q 017143 241 EFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPES--IVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLE 318 (376)
Q Consensus 241 ~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (376)
+|+||.++++.+++..+ ...+++|+|++|++.++.... .+..... .+.. ...... ....+..+
T Consensus 218 ~~~~G~~~~~~~s~~~~---~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~-~g~~--~~~~~~---------~~~~~~~e 282 (330)
T 3e9m_A 218 KFAEGTLGNIFINVGLK---IPSEMTICGTKGQIVIPNFWKTDCAYYTDA-QGNT--VKWSEQ---------FTSEFTYE 282 (330)
T ss_dssp EETTTEEEEEEEEESCC---CCCEEEEEETTEEEEEETTTTCSEEEEECS-SSCE--EEEECC---------CSCHHHHH
T ss_pred EECCCCEEEEEEEeccC---CCCEEEEEeCceEEEECCCCCCCEEEEEEC-CCce--EEEEEc---------CCcccHHH
Confidence 99999999999887543 345899999999999854211 1222111 1110 011111 11226789
Q ss_pred HHHHHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCEEEe
Q 017143 319 HLNFLSAIRAKGAK--VPAVDLQDGLISVAIGVAAQLSIEKGRFIAI 363 (376)
Q Consensus 319 l~~f~~~i~~~~~~--~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~ 363 (376)
+++|+++|+ ++. .+.++++++++++++++++++|+.+++|...
T Consensus 283 ~~~f~~~i~--~g~~~~~~~~~~d~l~~~~i~~ai~~s~~~~~~~~~ 327 (330)
T 3e9m_A 283 INHVNQCLQ--DKKLTSPVMTKELTIATVKIVESFYQEWFDNEGHHH 327 (330)
T ss_dssp HHHHHHHHH--TTCSSCSSSCHHHHHHHHHHHHHHHHHHTCCC----
T ss_pred HHHHHHHHH--cCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 999999998 444 6779999999999999999999999988653
No 15
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=100.00 E-value=6.9e-57 Score=421.70 Aligned_cols=327 Identities=23% Similarity=0.318 Sum_probs=265.4
Q ss_pred CCCCceeEEEEeCChhhHHHHHHhh-hhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 2 AANDTVKYGIIGMGMMGREHFINLH-HLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 2 ~~~~~~~v~iiG~G~~g~~~~~~~~-~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
+.|+++||||||+|.+|..|++.+. .. ++++|++|||++++ +++++++++|+.+..|+|++++++++++|+|+|
T Consensus 19 ~~m~~~rvgiIG~G~~g~~~~~~l~~~~--~~~~lvav~d~~~~---~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i 93 (357)
T 3ec7_A 19 FQGMTLKAGIVGIGMIGSDHLRRLANTV--SGVEVVAVCDIVAG---RAQAALDKYAIEAKDYNDYHDLINDKDVEVVII 93 (357)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHTC--TTEEEEEEECSSTT---HHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEE
T ss_pred cCCCeeeEEEECCcHHHHHHHHHHHhhC--CCcEEEEEEeCCHH---HHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEE
Confidence 3466899999999999999999998 66 89999999999998 677888899954468999999999988999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEE-EEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILV-QVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~-~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
|||+..|.+++++||+ +|||||||||++.+.+|+++|.+++++ +|+.+ ++++++||.|.++.+|++|++|.||+|.
T Consensus 94 ~tp~~~h~~~~~~al~--aGk~Vl~EKPla~~~~e~~~l~~~a~~-~g~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~ 170 (357)
T 3ec7_A 94 TASNEAHADVAVAALN--ANKYVFCEKPLAVTAADCQRVIEAEQK-NGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQPL 170 (357)
T ss_dssp CSCGGGHHHHHHHHHH--TTCEEEEESSSCSSHHHHHHHHHHHHH-HTSCCEEEECGGGGSHHHHHHHHHHHHTTTCSEE
T ss_pred cCCcHHHHHHHHHHHH--CCCCEEeecCccCCHHHHHHHHHHHHH-hCCeEEEEeecccCCHHHHHHHHHHhcCCCCCeE
Confidence 9999999999999999 999999999999999999999999955 48776 9999999999999999999999999999
Q ss_pred EEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEE
Q 017143 160 MVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
.++..+ +.+.. +.+|+ +||.++|+|+|.+|+++||+|.+|++|++....... ...+++|.+.++
T Consensus 171 ~v~~~~-~~~~~--p~~w~-----ggg~l~d~g~H~iDl~~~l~G~~~~~V~a~~~~~~~--------~~~~~~D~~~~~ 234 (357)
T 3ec7_A 171 MVHGRH-YNAST--VPEYK-----TPQAIYETLIHEIDVMHWLLNEDYKTVKVYFPRQSS--------LVTTLRDPQLVV 234 (357)
T ss_dssp EEEEEE-ECSCC--CTTCC-----TTHHHHTTHHHHHHHHHHHHTCCEEEEEEECCSCCT--------TCCSSCCSEEEE
T ss_pred EEEEEE-eCCCC--Ccccc-----CCchhhhcccHHHHHHHHHcCCCceEEEEEEecccc--------cCCCcceeEEEE
Confidence 998743 22221 23453 788999999999999999999779999988654321 123678999999
Q ss_pred EEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHH
Q 017143 240 VEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEH 319 (376)
Q Consensus 240 l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (376)
++|+||.++++..++.... ....+++|+|++|++.++.... +..... .+... .... .+.....+.+..++
T Consensus 235 l~~~~G~~~~~~~s~~~~~-~~~~~~~i~G~~G~i~~~~~~~-~~~~~~----~~~~~-~~~~---~~~~~~~~~~~~~~ 304 (357)
T 3ec7_A 235 METTSGINIVVEVFVNCQY-GYDIHCDVTGEKGMAELPTVAS-AAVRKA----AKYST-DILV---DWKQRFIDAYDIEF 304 (357)
T ss_dssp EEETTCCEEEEEEETTCSS-CCEEEEEEEESSEEEECCCCCC-CEEEET----TEEEE-ECCC---CGGGTSHHHHHHHH
T ss_pred EEECCCCEEEEEEEeccCC-CCCcEEEEEECCcEEEecCCCc-EEEEcC----CCccc-ccCC---cchhhhhHHHHHHH
Confidence 9999999999998765432 2345899999999999874332 222111 01100 0000 00111124566889
Q ss_pred HHHHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEeh
Q 017143 320 LNFLSAIRAKGA-KVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIE 364 (376)
Q Consensus 320 ~~f~~~i~~~~~-~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~ 364 (376)
++|+++|+ ++ .++.++++|+++++++++|+++|+++|++|.|+
T Consensus 305 ~~F~~~i~--~g~~~~~~~~~d~~~~~~i~~a~~~Sa~~G~~V~l~ 348 (357)
T 3ec7_A 305 QDFFDRLN--AGLPPAGPTSWDGYLAAVTADACVKSQETGNTEIVE 348 (357)
T ss_dssp HHHHHHHH--TTCCCCSSCHHHHHHHHHHHHHHHHHHHHSSCEECC
T ss_pred HHHHHHHH--cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 99999998 66 778899999999999999999999999999996
No 16
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=100.00 E-value=3.5e-56 Score=416.68 Aligned_cols=334 Identities=18% Similarity=0.254 Sum_probs=263.7
Q ss_pred CCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 4 NDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
++++||||||+|.+|+. |++.+... ++++|++|||+++++ ++ ++++. ++.|+|+++||+++++|+|+|||
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~~~~~--~~~~l~av~d~~~~~---~~---~~~~~-~~~~~~~~~ll~~~~vD~V~i~t 75 (352)
T 3kux_A 5 ADKIKVGLLGYGYASKTFHAPLIMGT--PGLELAGVSSSDASK---VH---ADWPA-IPVVSDPQMLFNDPSIDLIVIPT 75 (352)
T ss_dssp TCCEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECSCHHH---HH---TTCSS-CCEESCHHHHHHCSSCCEEEECS
T ss_pred cCCceEEEECCCHHHHHHHHHHHhhC--CCcEEEEEECCCHHH---HH---hhCCC-CceECCHHHHhcCCCCCEEEEeC
Confidence 35799999999999996 99999888 899999999999873 33 34433 36899999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEE
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVA 162 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~ 162 (376)
|+..|++++++||+ +||||+||||++.+.+|+++|.++|+ ++|+.+++++++||.|.++.+|++|++|.||+|..++
T Consensus 76 p~~~H~~~~~~al~--aGkhV~~EKPla~~~~e~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~ 152 (352)
T 3kux_A 76 PNDTHFPLAQSALA--AGKHVVVDKPFTVTLSQANALKEHAD-DAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYFE 152 (352)
T ss_dssp CTTTHHHHHHHHHH--TTCEEEECSSCCSCHHHHHHHHHHHH-HTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEEEEE
T ss_pred ChHHHHHHHHHHHH--CCCcEEEECCCcCCHHHHHHHHHHHH-HcCCeEEEEeecccCHHHHHHHHHHhcCCCCceEEEE
Confidence 99999999999999 99999999999999999999999995 4599999999999999999999999999999999999
Q ss_pred EeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEe
Q 017143 163 IREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEF 242 (376)
Q Consensus 163 ~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~ 242 (376)
+.+.++.. ..+..|+.+...+||.++|+|+|.+|+++||+| +|++|++....... ..+++|++.++|+|
T Consensus 153 ~~~~~~~~-~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~p~~v~a~~~~~~~---------~~~~~d~~~~~l~~ 221 (352)
T 3kux_A 153 SHFDRYRP-EIRQRWREQAGAGGGIWYDLGPHLLDQALQLFG-LPETLNVDLGMLRP---------GSQSVDYFHAVLSY 221 (352)
T ss_dssp EEEECBCC-SSCSSCSCC---CBCHHHHHHHHHHHHHHHHHC-CCSEEEEEEECCST---------TCCSBCEEEEEEEE
T ss_pred EEEeccCC-CCCcccccCCCCCCceeehhhhHHHHHHHHHhC-CCeEEEEEEEEecC---------CCCcccEEEEEEEE
Confidence 87544322 225678877778999999999999999999999 79999998753211 13678999999999
Q ss_pred cCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce---eeeecc----cCC---ccceEEeeccCcc-ccccCCC
Q 017143 243 ENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI---VRFATR----EAG---REDVQTLKAEDDR-IEYEGLH 311 (376)
Q Consensus 243 ~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~---~~~~~~----~~~---~~~~~~~~~~~~~-~~~~~~~ 311 (376)
+|..+++..++..++. ..+++|+|++|++.++..+.. +..... ... ..+.......... .......
T Consensus 222 -~g~~~~~~~s~~~~~~--~~~~~i~G~~G~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
T 3kux_A 222 -PGQRVVLHSTVLAAAE--TARYIVHGTQGSYIKFGVDPQEDRLKAGERLPQADWGYDMRDGIVTLSHDNVLTEKPLLTL 298 (352)
T ss_dssp -TTEEEEEEEESBCCSC--CCSEEEEESSEEEEECSCCSHHHHHHTTCCSCCTTTTCCCCCEEEEEESSSCEEEEEECCC
T ss_pred -CCEEEEEEEEeecCCC--CCEEEEEeCCcEEEEeCCChhHHHHhcCCCCCCcccCcCCCCCeeEeccCCcceeeeccCC
Confidence 8899999988765432 347999999999986432211 000000 000 0011111111000 0111122
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehh
Q 017143 312 HGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEE 365 (376)
Q Consensus 312 ~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~ 365 (376)
.+.+..++++|+++|+ ++.++.+++++++++++|++|+++|+++|++|+|++
T Consensus 299 ~~~~~~~~~~f~~ai~--~~~~~~~~~~d~~~~~~i~~a~~~Sa~~g~~V~l~~ 350 (352)
T 3kux_A 299 PGNYPAYYAGIRDAIW--GTAPNPVPATEAIKVMELIELGIASDQQKKALPIIA 350 (352)
T ss_dssp CCCTHHHHHHHHHHHT--TSSCCSSBHHHHHHHHHHHHHHHHHHHHTSCEECCC
T ss_pred CCCHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCEEEeec
Confidence 3567789999999998 777788999999999999999999999999999964
No 17
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.6e-56 Score=427.25 Aligned_cols=340 Identities=22% Similarity=0.275 Sum_probs=262.4
Q ss_pred CCceeEEEEeCCh---hhHHHHHHhhhhcCCCcEEEE-EeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhC-----C
Q 017143 4 NDTVKYGIIGMGM---MGREHFINLHHLRSQGVSVVC-IADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDS-----G 73 (376)
Q Consensus 4 ~~~~~v~iiG~G~---~g~~~~~~~~~~~~~~~~~~~-v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~-----~ 73 (376)
|+++||||||+|. +|..|++++... ++++|++ |||++++ +++++++++|++ .+.|+|+++||++ +
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~~~~---~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~ 109 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLD--DHYELVAGALSSTPE---KAEASGRELGLDPSRVYSDFKEMAIREAKLKN 109 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHT--SCEEEEEEECCSSHH---HHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTT
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhC--CCcEEEEEEeCCCHH---HHHHHHHHcCCCcccccCCHHHHHhcccccCC
Confidence 5689999999998 999999998887 7899997 9999998 688889999985 3689999999998 7
Q ss_pred CCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcC
Q 017143 74 LCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSG 153 (376)
Q Consensus 74 ~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g 153 (376)
++|+|+|+||+..|++++++||+ +|||||||||++.+++|+++|.++++ ++|+.+++++++||.|.++++|++|++|
T Consensus 110 ~vD~V~I~tp~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~-~~g~~~~v~~~~R~~p~~~~~k~~i~~G 186 (417)
T 3v5n_A 110 GIEAVAIVTPNHVHYAAAKEFLK--RGIHVICDKPLTSTLADAKKLKKAAD-ESDALFVLTHNYTGYPMVRQAREMIENG 186 (417)
T ss_dssp CCSEEEECSCTTSHHHHHHHHHT--TTCEEEEESSSCSSHHHHHHHHHHHH-HCSSCEEEECGGGGSHHHHHHHHHHHTT
T ss_pred CCcEEEECCCcHHHHHHHHHHHh--CCCeEEEECCCcCCHHHHHHHHHHHH-HcCCEEEEEecccCCHHHHHHHHHHhcC
Confidence 89999999999999999999999 99999999999999999999999995 5599999999999999999999999999
Q ss_pred CCCceEEEEEeeccC--Ccc-----cccCccccccccC--CcccccccccHHHHHHHHhCCCCeEEEEecccccccCccc
Q 017143 154 SIGQVKMVAIREHRF--PFL-----VKVNDWNRFNENT--GGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEM 224 (376)
Q Consensus 154 ~iG~i~~~~~~~~~~--~~~-----~~~~~w~~~~~~~--gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~ 224 (376)
.||+|+.+++.+... ... ..+..|+.+...+ ||+++|+|+|.+|+++||+|.+|++|++........
T Consensus 187 ~iG~i~~v~~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~G~gG~l~d~g~H~lDl~~~l~G~~~~~V~a~~~~~~~~---- 262 (417)
T 3v5n_A 187 DIGAVRLVQMEYPQDWLTENIEQSGQKQAAWRTDPARSGAGGSTGDIGTHAYNLGCFVSGLELEELAADLDSFVGG---- 262 (417)
T ss_dssp TTCSEEEEEEEEECCTTSCC--------------------CCHHHHTHHHHHHHHHHHHCCCEEEEEEEEECCSTT----
T ss_pred CCCCeEEEEEEEecccccCccccccCCCcCcccCHHHcCCccHHHHHHHHHHHHHHHhcCCCceEEEEEEEecCCC----
Confidence 999999999875321 111 2346788776655 499999999999999999998899999987654321
Q ss_pred cCCCCCcccccEEEEEEecC----CcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccc-eeeeecccCCccceEEee
Q 017143 225 YNGKVPDIIDNAYVIVEFEN----GSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPES-IVRFATREAGREDVQTLK 299 (376)
Q Consensus 225 ~~~~~~~~~d~~~~~l~~~~----G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~-~~~~~~~~~~~~~~~~~~ 299 (376)
.+++|.+.++++|+| |+++++..++..++.....+++|+|++|+++++.... .+.+...... ...+.
T Consensus 263 -----~~~~D~~~~~l~~~~~~~~G~~~~~~~s~~~~~~~~~~~~~i~Gt~G~l~~~~~~~~~l~~~~~~~~---~~~~~ 334 (417)
T 3v5n_A 263 -----RQLDDNAHVLMRFREKDGTRAKGMLWCSQVAPGHENGLMVRVYGTKGGLEWTQKDPNYLWYTPFGEP---KRLLT 334 (417)
T ss_dssp -----CCSCCEEEEEEEECCBTTBCCEEEEEEESCCTTCSSCCEEEEEESSEEEEEETTSTTEEEEEETTSC---EEEEE
T ss_pred -----CCCceEEEEEEEECCCCCCCeEEEEEEEecccCCCCCeEEEEEecceEEEEccCCCCeEEEEeCCCC---cEEEe
Confidence 247899999999999 9999999998776665667999999999999876432 2332211111 11111
Q ss_pred ccCcc--------ccccCCCCC----CCHHHHHHHHHHHHhcC-CCCC-----CCCHHHHHHHHHHHHHHHHHHHc-CCE
Q 017143 300 AEDDR--------IEYEGLHHG----SSYLEHLNFLSAIRAKG-AKVP-----AVDLQDGLISVAIGVAAQLSIEK-GRF 360 (376)
Q Consensus 300 ~~~~~--------~~~~~~~~~----~~~~~l~~f~~~i~~~~-~~~~-----~~~~~d~~~~~~ii~a~~~S~~~-g~~ 360 (376)
..... ......+.. .|..++++|+++|++.. +.+| .++++|+++++++++|+++|+++ |+|
T Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~~f~~~~~~f~~ai~~~~~G~~p~~~~~~~~~~dg~~~~~i~~A~~~S~~~~g~~ 414 (417)
T 3v5n_A 335 RAGAGASPAAARVSRIPSGHPEGYLEGFANIYSEAARAIYAKRNGGKADPSVIYPTIDDGMRGMTFVDACVRSSERNGAW 414 (417)
T ss_dssp TTSTTCCHHHHTTCCSCTTSCCCHHHHHHHHHHHHHHHHHTTC----CCTTCCCCCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCCccCchhhhhccCCCCCCccHHHHHHHHHHHHHHHHHhhccCCCCcccCCCCCHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 11100 011111112 23467899999998421 2222 58999999999999999999999 899
Q ss_pred EEe
Q 017143 361 IAI 363 (376)
Q Consensus 361 v~~ 363 (376)
|+|
T Consensus 415 V~v 417 (417)
T 3v5n_A 415 IKV 417 (417)
T ss_dssp BC-
T ss_pred eeC
Confidence 865
No 18
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=100.00 E-value=8.9e-57 Score=419.82 Aligned_cols=323 Identities=19% Similarity=0.208 Sum_probs=263.0
Q ss_pred CCCCceeEEEEeCChhhH-HHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 2 AANDTVKYGIIGMGMMGR-EHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 2 ~~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
++|+++||||||+|.+|. .|++.+.+. ++++|++|||++++ +++++++++|++ .|+|++++++++++|+|+|
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~a~~~g~~--~~~~~~~ll~~~~~D~V~i 95 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAE--PLTEVTAIASRRWD---RAKRFTERFGGE--PVEGYPALLERDDVDAVYV 95 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHC--TTEEEEEEEESSHH---HHHHHHHHHCSE--EEESHHHHHTCTTCSEEEE
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhC--CCeEEEEEEcCCHH---HHHHHHHHcCCC--CcCCHHHHhcCCCCCEEEE
Confidence 456789999999999998 799999988 89999999999988 678889999976 7799999999989999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKM 160 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~ 160 (376)
|||+..|++++++||+ +||||+||||++.+++|+++|.+++++ +|+.+++++++||.|.++.+|++|++|.||+|+.
T Consensus 96 ~tp~~~h~~~~~~al~--aGk~Vl~EKP~a~~~~ea~~l~~~a~~-~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~ 172 (350)
T 3rc1_A 96 PLPAVLHAEWIDRALR--AGKHVLAEKPLTTDRPQAERLFAVARE-RGLLLMENFMFLHHPQHRQVADMLDEGVIGEIRS 172 (350)
T ss_dssp CCCGGGHHHHHHHHHH--TTCEEEEESSSCSSHHHHHHHHHHHHH-TTCCEEEECGGGGCTHHHHHHHHHHTTTTCSEEE
T ss_pred CCCcHHHHHHHHHHHH--CCCcEEEeCCCCCCHHHHHHHHHHHHH-hCCEEEEEecccCCHHHHHHHHHHhcCCCCCeEE
Confidence 9999999999999999 999999999999999999999999955 5999999999999999999999999999999999
Q ss_pred EEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEE
Q 017143 161 VAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIV 240 (376)
Q Consensus 161 ~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l 240 (376)
+++.+.... ..+.+|+.+...+||+++|+|+|.+|+++||+|.+|++|++...... ..+++|.+.++|
T Consensus 173 v~~~~~~~~--~~~~~wr~~~~~gGG~l~d~g~H~ld~~~~l~G~~~~~v~a~~~~~~----------~~~~d~~~~~~l 240 (350)
T 3rc1_A 173 FAASFTIPP--KPQGDIRYQADVGGGALLDIGVYPIRAAGLFLGADLEFVGAVLRHER----------DRDVVVGGNALL 240 (350)
T ss_dssp EEEEEECCC--CCTTCGGGCTTTTCHHHHHTTHHHHHHHHHHHCTTCEEEEEEEEEET----------TTTEEEEEEEEE
T ss_pred EEEEEecCC--CCccccccCcccCccHHHHHHHHHHHHHHHHcCCCcEEEEEEEEeCC----------CCCccceEEEEE
Confidence 998755422 34578887777899999999999999999999988999998754321 126789999999
Q ss_pred EecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHHH
Q 017143 241 EFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHL 320 (376)
Q Consensus 241 ~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (376)
+|+||.++++.+++. .....+++|+|++|++.++...... ........+..............+.+..+++
T Consensus 241 ~~~~G~~~~~~~s~~---~~~~~~~~i~G~~G~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 311 (350)
T 3rc1_A 241 TTRQGVTAQLTFGME---HAYTNNYEFRGSTGRLWMNRVFTPP------ATYQPVVHIERQDHAEQFVLPAHDQFAKSIR 311 (350)
T ss_dssp ECTTCCEEEEEEESS---SCCEEEEEEEESSCEEEEESCSCCC------TTCCCEEEEEETTEEEEEECCCCCHHHHHHH
T ss_pred EECCCCEEEEEEecC---CCCCCEEEEEeCCEEEEECcccCCC------CCCceEEEEecCCceEEEEcCCccHHHHHHH
Confidence 999999999988764 2344589999999999987521100 0000000000001000111112245678999
Q ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHc
Q 017143 321 NFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEK 357 (376)
Q Consensus 321 ~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~ 357 (376)
+|+++|+ ++.++.+++++++++++|++|+++|+++
T Consensus 312 ~f~~~i~--~g~~~~~~~~dal~~~~ii~ai~~Sa~~ 346 (350)
T 3rc1_A 312 AFAQAVL--SGEHPREWSEDSLRQASLVDAVRTGARD 346 (350)
T ss_dssp HHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 9999998 5566779999999999999999999865
No 19
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=100.00 E-value=2e-56 Score=417.17 Aligned_cols=324 Identities=22% Similarity=0.341 Sum_probs=264.5
Q ss_pred ceeEEEEeCChhhHHHHHHhh-hhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLH-HLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~-~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
++||||||+|.+|..|++.+. .. ++++|++|||++++ +++++++++|+++..|+|++++++++++|+|+||||+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~--~~~~l~av~d~~~~---~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKL--SGAEIVAVTDVNQE---AAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWG 76 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTC--SSEEEEEEECSSHH---HHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEECccHHHHHHHHHHHhhC--CCcEEEEEEcCCHH---HHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCc
Confidence 589999999999999999998 66 89999999999988 6788888999644689999999999899999999999
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEE-EEeeccccCHHHHHHHHHHHcCCCCceEEEEE
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILV-QVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAI 163 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~-~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~ 163 (376)
..|.+++++||+ +||||+||||++.+.+|+++|.+++++ +|+.+ ++++++||.|.++.+|++|++|.||+|..++.
T Consensus 77 ~~h~~~~~~al~--~Gk~vl~EKP~a~~~~e~~~l~~~a~~-~g~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~v~~ 153 (344)
T 3mz0_A 77 PAHESSVLKAIK--AQKYVFCEKPLATTAEGCMRIVEEEIK-VGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIHC 153 (344)
T ss_dssp GGHHHHHHHHHH--TTCEEEECSCSCSSHHHHHHHHHHHHH-HSSCCEEECCGGGGSHHHHHHHHHHHTTTTSSEEEEEE
T ss_pred hhHHHHHHHHHH--CCCcEEEcCCCCCCHHHHHHHHHHHHH-HCCEEEEEecccccCHHHHHHHHHHHcCCCCCcEEEEE
Confidence 999999999999 999999999999999999999999955 58877 99999999999999999999999999999988
Q ss_pred eeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEec
Q 017143 164 REHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFE 243 (376)
Q Consensus 164 ~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 243 (376)
.+ +.+.. +.+|+ +||.++|+|+|.+|+++||+|.+|++|++........ ...+.+|.+.++++|+
T Consensus 154 ~~-~~~~~--~~~w~-----ggg~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~~-------~~~~~~D~~~~~l~~~ 218 (344)
T 3mz0_A 154 AH-RNPTV--GDNYT-----TDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKN-------ALPHLKDPQIVVIETK 218 (344)
T ss_dssp EE-ECSCC--CTTCC-----TTHHHHTTTHHHHHHHHHHHTCCEEEEEEECCSCCTT-------SCTTCCCSEEEEEEET
T ss_pred Ee-cCCCC--Ccccc-----CCchhhhhhhHHHHHHHHhcCCCcEEEEEEEeccccc-------cCCCCCceEEEEEEEC
Confidence 53 22222 23453 7889999999999999999997799999886543221 1236789999999999
Q ss_pred CCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHHHH
Q 017143 244 NGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLNFL 323 (376)
Q Consensus 244 ~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 323 (376)
||.+++++.++.... ....+++|+|++|++.++.... +.+... .+... .... .+.....+.+..++++|+
T Consensus 219 ~G~~~~~~~s~~~~~-~~~~~~~i~G~~G~i~~~~~~~-~~~~~~----~~~~~-~~~~---~~~~~~~~~~~~~~~~f~ 288 (344)
T 3mz0_A 219 GGIVINAEIYVNCKY-GYDIQCEIVGEDGIIKLPEPSS-ISLRKE----GRFST-DILM---DWQRRFVAAYDVEIQDFI 288 (344)
T ss_dssp TCCEEEEEEETTCSS-CCEEEEEEEESSCEEECCCCCC-CEEEET----TEEEE-CCCS---CHHHHSHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeccCC-CCcceEEEEeCCCEEEEcCCCc-EEEEeC----CCccc-cccC---chhhhhhHHHHHHHHHHH
Confidence 999999998875432 2345899999999999874332 222110 01100 0000 000111245667899999
Q ss_pred HHH-HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEeh
Q 017143 324 SAI-RAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIE 364 (376)
Q Consensus 324 ~~i-~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~ 364 (376)
++| + ++.++.++++|+++++++++|+++|+++|++|+++
T Consensus 289 ~~i~~--~g~~~~~~~~d~~~~~~i~~a~~~Sa~~g~~V~l~ 328 (344)
T 3mz0_A 289 DSIQK--KGEVSGPTAWDGYIAAVTTDACVKAQESGQKEKVE 328 (344)
T ss_dssp HHHHH--HSSCCSSCHHHHHHHHHHHHHHHHHHHHCSCEECC
T ss_pred HHHHh--CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcEEEe
Confidence 999 8 56677899999999999999999999999999996
No 20
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.6e-56 Score=415.96 Aligned_cols=323 Identities=16% Similarity=0.216 Sum_probs=257.8
Q ss_pred CCCceeEEEEeCChhhH-HHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 3 ANDTVKYGIIGMGMMGR-EHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
||+++||||||+|.++. .|++.+. . ++++|++|||++++ ++++++++|+.. +.|+|+++||+++++|+|+|+
T Consensus 23 Mm~~irvgiiG~G~~~~~~~~~~~~-~--~~~~lvav~d~~~~---~a~~~a~~~~~~-~~~~~~~~ll~~~~vD~V~I~ 95 (361)
T 3u3x_A 23 MMDELRFAAVGLNHNHIYGQVNCLL-R--AGARLAGFHEKDDA---LAAEFSAVYADA-RRIATAEEILEDENIGLIVSA 95 (361)
T ss_dssp ---CCEEEEECCCSTTHHHHHHHHH-H--TTCEEEEEECSCHH---HHHHHHHHSSSC-CEESCHHHHHTCTTCCEEEEC
T ss_pred hccCcEEEEECcCHHHHHHHHHHhh-c--CCcEEEEEEcCCHH---HHHHHHHHcCCC-cccCCHHHHhcCCCCCEEEEe
Confidence 45679999999999986 4666665 4 79999999999998 788889999864 799999999999999999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeecccc-CHHHHHHHHHHHcCCCCceEE
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRY-MPPVAKLIQIVKSGSIGQVKM 160 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~-~p~~~~~k~~i~~g~iG~i~~ 160 (376)
||+..|++++++||+ +|||||||||++.+++|+++|+++| +++|+.+++++++|| .|.++.+|++|++|.||+|..
T Consensus 96 tp~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a-~~~g~~l~v~~~~R~~~p~~~~~k~~i~~g~iG~i~~ 172 (361)
T 3u3x_A 96 AVSSERAELAIRAMQ--HGKDVLVDKPGMTSFDQLAKLRRVQ-AETGRIFSILYSEHFESPATVKAGELVAAGAIGEVVH 172 (361)
T ss_dssp CCHHHHHHHHHHHHH--TTCEEEEESCSCSSHHHHHHHHHHH-HTTCCCEEEECHHHHTCHHHHHHHHHHHTTTTSSEEE
T ss_pred CChHHHHHHHHHHHH--CCCeEEEeCCCCCCHHHHHHHHHHH-HHcCCEEEEechHhhCCHHHHHHHHHHHcCCCCCeEE
Confidence 999999999999999 9999999999999999999999999 566999999999999 599999999999999999999
Q ss_pred EEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCe-EEEEecccccccCccccCCCCCcccccEEEE
Q 017143 161 VAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPM-RVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 161 ~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~-~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
++..+........+..|+.+...+||+++|+|+|.+|+++||+|.++. .|++........ ...+++|.+.++
T Consensus 173 ~~~~~~~~~~~~~~~~w~~~~~~~GG~l~d~g~H~iD~~~~l~G~~~~~~v~a~~~~~~~~-------~~~~~~d~~~~~ 245 (361)
T 3u3x_A 173 IVGLGPHRLRRETRPDWFFRRADYGGILTDIASHQCEQFLFFTGVNDATVLSASVGNQSVP-------DAPELQDTGSIH 245 (361)
T ss_dssp EEEEEECCCCGGGSCGGGTCHHHHCCHHHHHSHHHHHHHHHHHCCSCCEEEEEEEECCSCT-------TSTTSCCEEEEE
T ss_pred EEEecccccCCCCCCCcccCcCccCchHHhhhhHHHHHHHHHhCCCCeEEEEEEeecccCC-------CCCCCCceEEEE
Confidence 988543322233457888777788999999999999999999997554 478775543211 123688999999
Q ss_pred EEecCCcEEEEEEEEeecCCCC---ceEEEEEecCCeeeeeccc--------ceeeeecccCCccceEEeeccCcccccc
Q 017143 240 VEFENGSRGMLDLCMFAEGSKN---EQEIVVVGNTGKGEAFVPE--------SIVRFATREAGREDVQTLKAEDDRIEYE 308 (376)
Q Consensus 240 l~~~~G~~~~l~~~~~~~~~~~---~~~~~i~Gt~G~i~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (376)
|+|+||. +++..+|..+.... ..+++|+|++|++.++... ..+.... ..+......
T Consensus 246 l~~~~G~-~~~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~l~~~~----~~g~~~~~~-------- 312 (361)
T 3u3x_A 246 LSTGRTT-GMIHVNWLTPEGMPTWGDGRLFIVGTSGTIEVRKTVDLAGREGGNHLFLAD----RNGVEHIDC-------- 312 (361)
T ss_dssp EECSSCE-EEEEEESCCCTTCSSSCCCEEEEEESSCEEEEECSCCTTSSSSSCEEEEEC----SSCEEEEEC--------
T ss_pred EEECCce-EEEEEEeecCCCCCCCCCceEEEEeCCeEEEEeccccccccCCCceEEEEC----CCCceecCc--------
Confidence 9999999 99999887654332 4589999999999986321 1111111 011111111
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCE
Q 017143 309 GLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRF 360 (376)
Q Consensus 309 ~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~ 360 (376)
...+..++++|+++|+ ++.++.++.+|+++++++++|+++|+++.++
T Consensus 313 ---~~~~~~~~~~F~~ai~--~~~~~~~~~~d~l~~l~i~~a~~~Sa~~~~~ 359 (361)
T 3u3x_A 313 ---SRVDLPFGRQFLADIR--DRTETAMPQERCFKAMELALQAQAIAEQNGD 359 (361)
T ss_dssp ---TTSCCTHHHHHHHHHH--HSCCSSSCHHHHHHHHHHHHHHHHHHC----
T ss_pred ---cccCChHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1223357899999999 5667889999999999999999999998664
No 21
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=100.00 E-value=1.3e-56 Score=418.47 Aligned_cols=335 Identities=25% Similarity=0.395 Sum_probs=268.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||||||+|.+|..|++.+.+. +++++++|||++++ ++++++++++++ +.|+|++++++++++|+|+||||+.
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~~~~~~~~-~~~~~~~~ll~~~~~D~V~i~tp~~ 75 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI--DDAILYAISDVRED---RLREMKEKLGVE-KAYKDPHELIEDPNVDAVLVCSSTN 75 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS--TTEEEEEEECSCHH---HHHHHHHHHTCS-EEESSHHHHHHCTTCCEEEECSCGG
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC--CCcEEEEEECCCHH---HHHHHHHHhCCC-ceeCCHHHHhcCCCCCEEEEcCCCc
Confidence 58999999999999999999987 89999999999998 677888899985 7899999999988899999999999
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEee
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIRE 165 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~~ 165 (376)
.|.+++++|++ +||||+||||++.+.+++++|.+++++ +|+.+++++++||.|.++.+|++|++|.||+|..+++.+
T Consensus 76 ~h~~~~~~al~--~gk~v~~EKP~~~~~~e~~~l~~~a~~-~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~~~~~~~ 152 (344)
T 3ezy_A 76 THSELVIACAK--AKKHVFCEKPLSLNLADVDRMIEETKK-ADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITS 152 (344)
T ss_dssp GHHHHHHHHHH--TTCEEEEESCSCSCHHHHHHHHHHHHH-HTCCEEEECGGGGCHHHHHHHHHHHTTTTSSEEEEEEEE
T ss_pred chHHHHHHHHh--cCCeEEEECCCCCCHHHHHHHHHHHHH-hCCcEEEeecccCCHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence 99999999999 999999999999999999999999954 599999999999999999999999999999999999853
Q ss_pred ccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecCC
Q 017143 166 HRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENG 245 (376)
Q Consensus 166 ~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G 245 (376)
. .+. +++|. +...+||.++|+|+|.+|+++||+|.+|++|++........... ..+.+|.+.++++|+||
T Consensus 153 ~-~~~---~~~~~-~~~~~GG~l~d~g~H~lDl~~~l~G~~~~~V~a~~~~~~~~~~~-----~~~~~D~~~~~l~~~~G 222 (344)
T 3ezy_A 153 R-DPA---PPPLD-YIRVSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIG-----KAGDVDTAVVVLRFKSG 222 (344)
T ss_dssp E-CSS---CCCHH-HHHTTTCHHHHTHHHHHHHHHHHHSSCEEEEEEEEECCSCHHHH-----HTTCCSEEEEEEEETTS
T ss_pred e-CCC---CCCcc-cccCCCceEecccchHHHHHHHHcCCCCeEEEEEeccccccccc-----cCCCCceEEEEEEECCC
Confidence 2 221 23343 33478999999999999999999998899999987654321110 01235889999999999
Q ss_pred cEEEEEEEEeecCCCCceEEEEEecCCeeeeecccc-eeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHHHHH
Q 017143 246 SRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPES-IVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLNFLS 324 (376)
Q Consensus 246 ~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~ 324 (376)
.++++..++.... ....+++|+|++|++.++.... .+..... .+.... .....+.....+.+..++++|++
T Consensus 223 ~~~~~~~s~~~~~-~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~----~g~~~~---~~~~~~~~~~~~~~~~~~~~f~~ 294 (344)
T 3ezy_A 223 ALGVIDNSRRAVY-GYDQRIEVFGSKGRIFADNVRETTVVLTDE----QGDRGS---RYLYFFLERYRDSYLEELKTFIK 294 (344)
T ss_dssp CEEEEEEESCCTT-SCEEEEEEEETTEEEEECCCBSCSEEEEET----TEEEEC---CBCCSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecccCC-CCceEEEEEECcEEEEEccCCCceEEEEcC----CCcccC---CCccchhhhhhHHHHHHHHHHHH
Confidence 9999998875432 2346899999999999875322 1222111 111100 00000000012345678999999
Q ss_pred HHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhhhh
Q 017143 325 AIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVMEE 369 (376)
Q Consensus 325 ~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~~~ 369 (376)
+|+ ++.++.++++++++++++++|+++|+++|++|+|+....+
T Consensus 295 ~i~--~~~~~~~~~~~~~~~~~i~~a~~~S~~~g~~V~~~~~~~~ 337 (344)
T 3ezy_A 295 NVK--SGEPPAVSGEDGKMALLLGYAAKKSLEEKRSVKLEEVIGE 337 (344)
T ss_dssp HHH--HTCCCSSCHHHHHHHHHHHHHHHHHHHHTBCEEGGGTC--
T ss_pred HHh--cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccccCC
Confidence 999 6667889999999999999999999999999999876543
No 22
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=100.00 E-value=4.6e-56 Score=416.47 Aligned_cols=337 Identities=21% Similarity=0.264 Sum_probs=258.6
Q ss_pred CCCCCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 1 MAANDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|++ +++||||||+|.+|.. |++.+... ++++|++|||+++++ ++++++. ++.|+|+++||+++++|+|+
T Consensus 1 M~m-~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~------~~~~~~~-~~~~~~~~~ll~~~~vD~V~ 70 (358)
T 3gdo_A 1 MSL-DTIKVGILGYGLSGSVFHGPLLDVL--DEYQISKIMTSRTEE------VKRDFPD-AEVVHELEEITNDPAIELVI 70 (358)
T ss_dssp -CT-TCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECSCHHH------HHHHCTT-SEEESSTHHHHTCTTCCEEE
T ss_pred CCC-CcceEEEEccCHHHHHHHHHHHhhC--CCeEEEEEEcCCHHH------HHhhCCC-CceECCHHHHhcCCCCCEEE
Confidence 543 5799999999999996 99999888 899999999999862 3456643 36999999999998999999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
||||+..|++++++||+ +||||+||||++.+++|+++|.++|+ ++|+.+++++++||.|.++.+|++|++|.||+|.
T Consensus 71 i~tp~~~H~~~~~~al~--aGkhVl~EKPla~~~~e~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 147 (358)
T 3gdo_A 71 VTTPSGLHYEHTMACIQ--AGKHVVMEKPMTATAEEGETLKRAAD-EKGVLLSVYHNRRWDNDFLTIKKLISEGSLEDIN 147 (358)
T ss_dssp ECSCTTTHHHHHHHHHH--TTCEEEEESSCCSSHHHHHHHHHHHH-HHTCCEEEECGGGGSHHHHHHHHHHHTTSSCSCC
T ss_pred EcCCcHHHHHHHHHHHH--cCCeEEEecCCcCCHHHHHHHHHHHH-HcCCeEEEeeecccCHHHHHHHHHHhcCCCCceE
Confidence 99999999999999999 99999999999999999999999995 4599999999999999999999999999999999
Q ss_pred EEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEE
Q 017143 160 MVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
.+++.+.+.. ......|+.+...+||+++|+|+|.+|+++||+| +|++|++....... ..+++|.+.++
T Consensus 148 ~~~~~~~~~~-~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~~~~V~a~~~~~~~---------~~~~~d~~~~~ 216 (358)
T 3gdo_A 148 TYQVSYNRYR-PEVQARWREKEGTATGTLYDLGSHIIDQTLHLFG-MPKAVTANVMAQRE---------NAETVDYFHLT 216 (358)
T ss_dssp EEEEECCCBC-CCC----------CCSHHHHTHHHHHHHHHHHHC-CCSEEEEEEECCST---------TCCSCCEEEEE
T ss_pred EEEEEEeccC-CCCCcccccCCCCCCceeeeehhHHHHHHHHHcC-CCeEEEEEEEeecC---------CCCcCceEEEE
Confidence 9998654432 2234568877778999999999999999999999 89999998654211 13678999999
Q ss_pred EEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeeccccee-ee--eccc----CC---cc--ceEEeeccCc-ccc
Q 017143 240 VEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIV-RF--ATRE----AG---RE--DVQTLKAEDD-RIE 306 (376)
Q Consensus 240 l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~-~~--~~~~----~~---~~--~~~~~~~~~~-~~~ 306 (376)
|+|+| ..+++..++..+. ...+++|+|++|++.++..+... .+ .... .. .. +......... ...
T Consensus 217 l~~~~-~~~~~~~s~~~~~--~~~~~~i~G~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 293 (358)
T 3gdo_A 217 LDYGK-LQAILYGGSIVPA--NGPRYQIHGKDSSFIKYGIDGQEDALRAGRKPEDDSWGADVPEFYGKLTTIRGSDKKTE 293 (358)
T ss_dssp EEETT-EEEEEEECSBCSS--CCCSEEEECSSEEEEECCCCSHHHHHHTTCCCCSTTTTCCCGGGCEEEEEEETTEEEEE
T ss_pred EEECC-EEEEEEEEeccCC--CCCEEEEEeCceEEEEeCCChHHHHHhcCCCCCccccCcCcccccceEEecCCCceeee
Confidence 99999 8888887776543 23479999999999875432210 00 0000 00 00 0011000000 001
Q ss_pred ccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhh
Q 017143 307 YEGLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEV 366 (376)
Q Consensus 307 ~~~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~ 366 (376)
......+.+..++++|+++|+ ++.++.++++|++++++|++|+++|+++|++|.++..
T Consensus 294 ~~~~~~~~~~~~~~~f~~ai~--~g~~~~~~~~da~~~~~i~~a~~~Sa~~g~~V~~~~~ 351 (358)
T 3gdo_A 294 TIPSVNGSYLTYYRKIAESIR--EGAALPVTAEEGINVIRIIEAAMESSKEKRTIMLEHE 351 (358)
T ss_dssp EECCCCCCTHHHHHHHHHHHH--HCCCCSSCHHHHHHHHHHHHHHHHHHHHTBCEECC--
T ss_pred eecCCCCcHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCEEEeeec
Confidence 111234567889999999999 6677889999999999999999999999999998654
No 23
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=8.2e-56 Score=415.49 Aligned_cols=336 Identities=20% Similarity=0.284 Sum_probs=256.1
Q ss_pred CCC-CCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEE
Q 017143 1 MAA-NDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVV 78 (376)
Q Consensus 1 m~~-~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V 78 (376)
|++ ++++||||||+|.+|+. |++.+... ++++|++|||+++++ ++ ++++. ++.|+|+++||+++++|+|
T Consensus 1 M~~~~~~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~---~~---~~~~~-~~~~~~~~~ll~~~~~D~V 71 (364)
T 3e82_A 1 MSLSNNTINIALIGYGFVGKTFHAPLIRSV--PGLNLAFVASRDEEK---VK---RDLPD-VTVIASPEAAVQHPDVDLV 71 (364)
T ss_dssp ------CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECSCHHH---HH---HHCTT-SEEESCHHHHHTCTTCSEE
T ss_pred CCCCCCcceEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcCCHHH---HH---hhCCC-CcEECCHHHHhcCCCCCEE
Confidence 544 45799999999999996 99999888 899999999999873 32 34443 3689999999999899999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCce
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQV 158 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 158 (376)
+||||+..|++++++||+ +||||+||||++.+.+|+++|.++++ ++|+.+++++++||.|.++.+|++|++|.||+|
T Consensus 72 ~i~tp~~~H~~~~~~al~--aGk~Vl~EKPla~~~~e~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i 148 (364)
T 3e82_A 72 VIASPNATHAPLARLALN--AGKHVVVDKPFTLDMQEARELIALAE-EKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAV 148 (364)
T ss_dssp EECSCGGGHHHHHHHHHH--TTCEEEECSCSCSSHHHHHHHHHHHH-HTTCCEEECCCCTTCHHHHHHHHHHHHTTTCSE
T ss_pred EEeCChHHHHHHHHHHHH--CCCcEEEeCCCcCCHHHHHHHHHHHH-HhCCeEEEEeecccCHHHHHHHHHHHcCCCcce
Confidence 999999999999999999 99999999999999999999999995 459999999999999999999999999999999
Q ss_pred EEEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEE
Q 017143 159 KMVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYV 238 (376)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~ 238 (376)
..+++.+.++. ......|+.+...+||+++|+|+|.+|+++||+| +|++|++....... ..+++|.+.+
T Consensus 149 ~~~~~~~~~~~-~~~~~~w~~~~~~ggG~l~d~g~H~id~~~~l~G-~p~~V~a~~~~~~~---------~~~~~d~~~~ 217 (364)
T 3e82_A 149 KHFESHFDRFR-PEVRVRWREQNVPGSGLWFDLGPHLIDQALQLFG-LPQSVQGNIATLRD---------GAEINDWAHV 217 (364)
T ss_dssp EEEEEEEECBC-CCC-----------CCHHHHHHHHHHHHHHHHHC-CCSEEEEEEECCST---------TCCSCCEEEE
T ss_pred EEEEEEeeccC-CCCCcccccCCCCCCChHHhhhhHHHHHHHHHhC-CCeEEEEEEEeecC---------CCCcccEEEE
Confidence 99998654432 2224578887778999999999999999999999 79999998653211 1368899999
Q ss_pred EEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceee-e--ecccC----Ccc-ceEEeeccCccccccCC
Q 017143 239 IVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVR-F--ATREA----GRE-DVQTLKAEDDRIEYEGL 310 (376)
Q Consensus 239 ~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~-~--~~~~~----~~~-~~~~~~~~~~~~~~~~~ 310 (376)
+|+|+| ..+++..++..++. ..+++|+|++|++.++..+.... + ..... ... ....+...+........
T Consensus 218 ~l~~~~-~~~~~~~s~~~~~~--~~~~~i~G~~G~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (364)
T 3e82_A 218 VLNYPA-HKVILHCSMLVAGG--SSRFTVHGDKGSVIKARADQQESQLLAGVVPGSADWGQDDDPLVIYDASLQAHAQAT 294 (364)
T ss_dssp EEECSS-CEEEEEEESBCCSC--CCSEEEEESSEEEEECSCCCHHHHHHHTCCTTSTTTTCCCSCEEEEETTSCEEEECC
T ss_pred EEEECC-EEEEEEEecccCCC--CCEEEEEeCCEEEEEecCChhHHHHhcCCCCCccccccCCCCceeecCCccceecCC
Confidence 999999 88888887765443 34799999999998754322110 0 00000 000 00001101100011112
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEeh
Q 017143 311 HHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIE 364 (376)
Q Consensus 311 ~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~ 364 (376)
..+.+..++++|+++|+ ++.++.++++|++++++|++|+++|+++|++|.|+
T Consensus 295 ~~~~~~~~~~~f~~ai~--~g~~~~~~~~dal~~~~i~~A~~~Sa~~g~~V~l~ 346 (364)
T 3e82_A 295 PQGDQRQYYMLIRDALK--GQIANPVPPVEALAVMAVLEAAVRSAESGMVQTLD 346 (364)
T ss_dssp CCCCTHHHHHHHHHHHT--TSSCCSSCHHHHHHHHHHHHHHHHHHHHSBCBCCC
T ss_pred CCCCHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 23567789999999998 77788899999999999999999999999999996
No 24
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=100.00 E-value=3.5e-55 Score=407.09 Aligned_cols=324 Identities=17% Similarity=0.245 Sum_probs=260.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||||||+|.+|+.|++.+......+++|++|||++++ +++++++++|++ +.|+|+++|++++++|+|+|+||+.
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~---~a~~~a~~~~~~-~~~~~~~~ll~~~~vD~V~i~tp~~ 77 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLS---RAKEFAQKHDIP-KAYGSYEELAKDPNVEVAYVGTQHP 77 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHH---HHHHHHHHHTCS-CEESSHHHHHHCTTCCEEEECCCGG
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHH---HHHHHHHHcCCC-cccCCHHHHhcCCCCCEEEECCCcH
Confidence 599999999999999999998873236899999999988 788899999986 7899999999998999999999999
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEee
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIRE 165 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~~ 165 (376)
.|++++++||+ +|||||||||++.+.+|+++|.+++++ +|+.+++++++||.|.++.+|++|++|.||+|..+++.+
T Consensus 78 ~H~~~~~~al~--~GkhVl~EKP~a~~~~e~~~l~~~a~~-~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~v~~~~ 154 (334)
T 3ohs_X 78 QHKAAVMLCLA--AGKAVLCEKPMGVNAAEVREMVTEARS-RGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEF 154 (334)
T ss_dssp GHHHHHHHHHH--TTCEEEEESSSSSSHHHHHHHHHHHHH-TTCCEEEECGGGGSHHHHHHHHHHHHTTTCSEEEEEEEE
T ss_pred HHHHHHHHHHh--cCCEEEEECCCCCCHHHHHHHHHHHHH-hCCEEEEEEhHhcCHHHHHHHHHHhcCCCCCeEEEEEEc
Confidence 99999999999 999999999999999999999999954 599999999999999999999999999999999999865
Q ss_pred ccCCcccccCccccccccCCcccccccccHHHHHHHHhC-CCCeEEEEecccccccCccccCCCCCcccccEEEEEEecC
Q 017143 166 HRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVG-SNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFEN 244 (376)
Q Consensus 166 ~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G-~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~ 244 (376)
.... ...+|..+...+||+++|+|+|.+|+++||+| .+|++|++..... ..+++|.+.++++|+|
T Consensus 155 ~~~~---~~~~~~~~~~~gGG~l~d~g~H~id~~~~l~G~~~p~~v~a~~~~~-----------~~~~~d~~~~~l~~~~ 220 (334)
T 3ohs_X 155 GKNL---THVPRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRH-----------ETGVDDTVTVLLQYPG 220 (334)
T ss_dssp ECCC---TTCHHHHCTTTTCSHHHHTHHHHHHHHHHHTTTCCCSEEEEEEEEC-----------TTSSEEEEEEEEEETT
T ss_pred cCCC---CCcCcCCCcccCCCCHHHhhhHHHHHHHHHhCCCCCeEEEEEEEEC-----------CCCcceEEEEEEEeCC
Confidence 4321 12234445667899999999999999999999 6899999876532 1267899999999999
Q ss_pred CcEEEEEEEEeecCCCCceEEEEEecCCeeee-ecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHHHH
Q 017143 245 GSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEA-FVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLNFL 323 (376)
Q Consensus 245 G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 323 (376)
|.++++.+++... ...+++|+|++|++.+ +.......+.. .+. ...+..+.....+.-...+.+..|+++|+
T Consensus 221 G~~~~~~~s~~~~---~~~~~~i~G~~G~i~~~~~~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~e~~~f~ 293 (334)
T 3ohs_X 221 EVHGSFTCSITAQ---LSNTASVSGTKGMAQLLNPCWCPTELVV--KGE--HKEFLLPPVPKNCNFDNGAGMSYEAKHVR 293 (334)
T ss_dssp TEEEEEEEESSSC---CCCCEEEEETTEEEEECSSTTSCCEEEE--TTE--EEECCCCSCCCSCSSTTGGGHHHHHHHHH
T ss_pred CCEEEEEEEeccC---CCCeEEEEeeeEEEEECCCCCCCeEEEE--CCe--EEEEeCCCcccccccCCCCccHHHHHHHH
Confidence 9999999887543 2347999999999998 32111111111 111 11111111111111112346778999999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHc
Q 017143 324 SAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEK 357 (376)
Q Consensus 324 ~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~ 357 (376)
++|+++..+.+.++++++++++++++++++|+..
T Consensus 294 ~~i~~g~~~~~~~~~~~~l~~~~i~~~i~~~~g~ 327 (334)
T 3ohs_X 294 ECLRKGLKESPVIPLVESELLADILEEVRRAIGV 327 (334)
T ss_dssp HHHHTTCSSCSSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 9998422246779999999999999999998653
No 25
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=100.00 E-value=2.8e-55 Score=420.16 Aligned_cols=340 Identities=16% Similarity=0.228 Sum_probs=272.1
Q ss_pred CCCCceeEEEEeCChhhH-HHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC---CCccCCHHHHhhCCCCCE
Q 017143 2 AANDTVKYGIIGMGMMGR-EHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP---LKVFPGHQELLDSGLCDV 77 (376)
Q Consensus 2 ~~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~D~ 77 (376)
++|+++||||||+|.+|+ .|++.+.+. ++++|++|||++++ +++++++++|++ +..|+|++++++++++|+
T Consensus 79 ~~~~~irigiIG~G~~g~~~~~~~l~~~--~~~~lvav~d~~~~---~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~ 153 (433)
T 1h6d_A 79 PEDRRFGYAIVGLGKYALNQILPGFAGC--QHSRIEALVSGNAE---KAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDA 153 (433)
T ss_dssp CCCCCEEEEEECCSHHHHHTHHHHTTTC--SSEEEEEEECSCHH---HHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCE
T ss_pred CCCCceEEEEECCcHHHHHHHHHHHhhC--CCcEEEEEEcCCHH---HHHHHHHHhCCCcccccccCCHHHHhcCCCCCE
Confidence 356789999999999997 899999887 79999999999988 677888899976 127999999999888999
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCc
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQ 157 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 157 (376)
|+|+||+..|.+++++||+ +||||+||||++.+.+|+++|.+++++ .|+.+++++++||.|.++.+|++|++|.||+
T Consensus 154 V~iatp~~~h~~~~~~al~--aGk~Vl~EKPla~~~~e~~~l~~~a~~-~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~ 230 (433)
T 1h6d_A 154 VYIILPNSLHAEFAIRAFK--AGKHVMCEKPMATSVADCQRMIDAAKA-ANKKLMIGYRCHYDPMNRAAVKLIRENQLGK 230 (433)
T ss_dssp EEECSCGGGHHHHHHHHHH--TTCEEEECSSCCSSHHHHHHHHHHHHH-HTCCEEECCGGGGCHHHHHHHHHHHTTSSCS
T ss_pred EEEcCCchhHHHHHHHHHH--CCCcEEEcCCCCCCHHHHHHHHHHHHH-hCCeEEEEechhcCHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999 999999999999999999999999954 5999999999999999999999999999999
Q ss_pred eEEEEEeeccCCcccccCc-ccccccc-CCcccccccccHHHHHHHHhCCCCeEEEEe-cccccccCccccCCCCCcccc
Q 017143 158 VKMVAIREHRFPFLVKVND-WNRFNEN-TGGTLVEKCCHFFDLMRLFVGSNPMRVMAS-GAVDVNHKDEMYNGKVPDIID 234 (376)
Q Consensus 158 i~~~~~~~~~~~~~~~~~~-w~~~~~~-~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~-~~~~~~~~~~~~~~~~~~~~d 234 (376)
|..+++.+........+.. |+.+... +||.++|+|+|.+|+++||+|.+|.+|++. ...... . ...+++|
T Consensus 231 i~~v~~~~~~~~~~~~~~~~wr~~~~~~gGG~l~d~g~H~lD~~~~l~G~~p~~V~a~~~~~~~~---~----~~~~veD 303 (433)
T 1h6d_A 231 LGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPND---E----RFVEVED 303 (433)
T ss_dssp EEEEEEEEECCCCTTSHHHHGGGCHHHHSSSHHHHTHHHHHHHHHHHHTSCEEEEEEEEECCTTC---G----GGSSSCS
T ss_pred cEEEEEEEecccccCCCCcccccccccCCCCceecccchHHHHHHHHcCCCCEEEEEEecccCCC---c----cccccCc
Confidence 9999986544322223345 8877666 899999999999999999999779999987 322110 0 0125789
Q ss_pred cEEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce--eeeecccCCccceEEeeccCccccccCCCC
Q 017143 235 NAYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI--VRFATREAGREDVQTLKAEDDRIEYEGLHH 312 (376)
Q Consensus 235 ~~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (376)
.+.++++|+||.++++.+++.. ....+++|+|++|++.++..... ......... . .. . ...........
T Consensus 304 ~~~~~l~f~~G~~~~l~~s~~~---~~~~~~~I~Gt~G~i~~~~~~~~~~~~~~~~~~~-~--~~-~--~~~~~~~~~~~ 374 (433)
T 1h6d_A 304 RIIWQMRFRSGALSHGASSYST---TTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPG-H--AN-Q--SMMPQFIMPAN 374 (433)
T ss_dssp EEEEEEEETTSCEEEEEEESSS---CCEEEEEEEESSCEEEESSSSCSSCCCEEEEETT-E--EE-E--ECCCSSCCSSC
T ss_pred eEEEEEEECCCCEEEEEEEecc---CCCcEEEEEecCeEEEEECCccccccEEEEeccc-c--cc-C--CceeeccCCCc
Confidence 9999999999999999987632 34568999999999998643211 111000000 0 00 0 00001111123
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhh
Q 017143 313 GSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVM 367 (376)
Q Consensus 313 ~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~ 367 (376)
+.+..++++|+++|+ ++.++.++++++++++++++++++|+++|++|.+++..
T Consensus 375 ~~~~~~~~~F~~~I~--~g~~~~~~~~d~l~~~~ii~a~~~Sa~~g~~V~l~~~~ 427 (433)
T 1h6d_A 375 NQFSAQLDHLAEAVI--NNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGY 427 (433)
T ss_dssp CHHHHHHHHHHHHHH--TTCCCSSBHHHHHHHHHHHHHHHHHHHHSSCEECCSCC
T ss_pred cHHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEcCCcC
Confidence 456689999999998 66777899999999999999999999999999997653
No 26
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.7e-56 Score=414.79 Aligned_cols=336 Identities=21% Similarity=0.262 Sum_probs=268.4
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||||||+|.+|..|++.+.+. +++++++|||++++ +++++++++|. ..|+|++++++++++|+|+||||+
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~a~~~g~--~~~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAAN--PDLELVVIADPFIE---GAQRLAEANGA--EAVASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECSSHH---HHHHHHHTTTC--EEESSHHHHTTCSCCCEEEECSCG
T ss_pred CceEEEEECCcHHHHHHHHHHHhC--CCcEEEEEECCCHH---HHHHHHHHcCC--ceeCCHHHHhcCCCCCEEEEeCCc
Confidence 469999999999999999999988 89999999999998 67788889994 599999999998889999999999
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEe
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIR 164 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~ 164 (376)
..|.+++++|++ +||||+||||++.+.+++++|.+++ ++.|+.+++++++||.|.++.+|++|++|.||+|..+++.
T Consensus 76 ~~h~~~~~~al~--~gk~v~~EKP~~~~~~~~~~l~~~a-~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~v~~~ 152 (344)
T 3euw_A 76 STHVDLITRAVE--RGIPALCEKPIDLDIEMVRACKEKI-GDGASKVMLGFNRRFDPSFAAINARVANQEIGNLEQLVII 152 (344)
T ss_dssp GGHHHHHHHHHH--TTCCEEECSCSCSCHHHHHHHHHHH-GGGGGGEEECCGGGGCHHHHHHHHHHHTTTTSSEEEEEEE
T ss_pred hhhHHHHHHHHH--cCCcEEEECCCCCCHHHHHHHHHHH-HhcCCeEEecchhhcCHHHHHHHHHHhcCCCCceEEEEEE
Confidence 999999999999 8999999999999999999999999 5569999999999999999999999999999999999885
Q ss_pred eccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecC
Q 017143 165 EHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFEN 244 (376)
Q Consensus 165 ~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~ 244 (376)
+.. +.. .+..| ...+||.++|+|+|.+|+++||+| +|++|++........... ..+.+|.+.++++|+|
T Consensus 153 ~~~-~~~-~~~~~---~~~~gG~l~d~g~H~ld~~~~l~G-~~~~v~a~~~~~~~~~~~-----~~~~~D~~~~~l~~~~ 221 (344)
T 3euw_A 153 SRD-PAP-APKDY---IAGSGGIFRDMTIHDLDMARFFVP-NIVEVTATGANVFSQEIA-----EFNDYDQVIVTLRGSK 221 (344)
T ss_dssp EEC-SSC-CCHHH---HHHSCHHHHHTHHHHHHHHHHHCS-CEEEEEEEEECSSCHHHH-----HTTCCSEEEEEEEETT
T ss_pred ecC-CCC-CCccc---ccCCCceeecchhhHHHHHHHhcC-CcEEEEEEeccccccccc-----ccCCCceEEEEEEECC
Confidence 432 211 11223 457899999999999999999999 999999987654221100 0135688999999999
Q ss_pred CcEEEEEEEEeecCCCCceEEEEEecCCeeeeeccc-ceeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHHHH
Q 017143 245 GSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPE-SIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLNFL 323 (376)
Q Consensus 245 G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 323 (376)
|.++++..++..+. ....+++|+|++|++.++... ..+...... +.... ......+.....+.+..++++|+
T Consensus 222 G~~~~~~~s~~~~~-~~~~~~~i~G~~G~i~~~~~~~~~l~~~~~~----g~~~~--~~~~~~~~~~~~~~~~~~~~~f~ 294 (344)
T 3euw_A 222 GELINIVNSRHCSY-GYDQRLEAFGSKGMLAADNIRPTTVRKHNAE----STEQA--DPIFNFFLERYDAAYKAELATFA 294 (344)
T ss_dssp SCEEEEEEESCCTT-SCEEEEEEEETTEEEEECCCCSSCEEEESSS----CBSEE--CCCCCSHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEEEeccCC-CCceEEEEEECcEEEEEcCCCCceEEEEcCC----Ccccc--CCccccchhhhhHHHHHHHHHHH
Confidence 99999998886533 235689999999999987532 222222111 11000 00000000111234567899999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhhhhh
Q 017143 324 SAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVMEEL 370 (376)
Q Consensus 324 ~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~~~~ 370 (376)
++|+ ++.++.++++++++++++++|+++|+++|++|+|+..+++-
T Consensus 295 ~~i~--~~~~~~~~~~d~~~~~~i~~a~~~Sa~~g~~V~~~~~~~~~ 339 (344)
T 3euw_A 295 QGIR--DGQGFSPNFEDGVIALELANACLESAQTGRTVTLNPANEGH 339 (344)
T ss_dssp HHHH--HCSCCSSBHHHHHHHHHHHHHHHHHHHHTBCEESSCC----
T ss_pred HHHh--cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCCCcc
Confidence 9998 56678899999999999999999999999999998887653
No 27
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.2e-55 Score=409.76 Aligned_cols=327 Identities=23% Similarity=0.317 Sum_probs=264.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||||||+|.+|..|++.+.+. +++++++|||++++ +++++++++|+ . |+|++++++++++|+|+||||+.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~~~~~~~--~-~~~~~~~l~~~~~D~V~i~tp~~ 74 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGN--ADARLVAVADAFPA---AAEAIAGAYGC--E-VRTIDAIEAAADIDAVVICTPTD 74 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECSSHH---HHHHHHHHTTC--E-ECCHHHHHHCTTCCEEEECSCGG
T ss_pred ceEEEEECCCHHHHHHHHHHhhC--CCcEEEEEECCCHH---HHHHHHHHhCC--C-cCCHHHHhcCCCCCEEEEeCCch
Confidence 69999999999999999999988 89999999999998 67888889986 3 99999999988899999999999
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEee
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIRE 165 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~~ 165 (376)
.|.+++++|++ +||||+||||++.+.+|+++|.++++ +.|+.+++++++||.|.++.+|++|++|.||+|..+++.+
T Consensus 75 ~h~~~~~~al~--~gk~v~~EKP~~~~~~~~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~~~ 151 (331)
T 4hkt_A 75 THADLIERFAR--AGKAIFCEKPIDLDAERVRACLKVVS-DTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEVEMVTITS 151 (331)
T ss_dssp GHHHHHHHHHH--TTCEEEECSCSCSSHHHHHHHHHHHH-HTTCCEEECCGGGGCHHHHHHHHHHHTTTTCSEEEEEEEE
T ss_pred hHHHHHHHHHH--cCCcEEEecCCCCCHHHHHHHHHHHH-HcCCeEEEcccccCCHHHHHHHHHHHcCCCCceEEEEEEe
Confidence 99999999999 89999999999999999999999995 4599999999999999999999999999999999998754
Q ss_pred ccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecCC
Q 017143 166 HRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENG 245 (376)
Q Consensus 166 ~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G 245 (376)
.. +. ..|..+...+||+++|+|+|.+|+++||+|.+|.+|++........... ..+.+|.+.++++|+||
T Consensus 152 ~~-~~----~~~~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~v~a~~~~~~~~~~~-----~~~~~d~~~~~l~~~~G 221 (331)
T 4hkt_A 152 RD-PS----APPVDYIKRSGGIFRDMTIHDFDMARFLLGEEPVSVTATAAVLIDKAIG-----DAGDYDSVSVILQTASG 221 (331)
T ss_dssp EC-SS----CCCHHHHHTTTCHHHHTHHHHHHHHHHHHCSCEEEEEEEEECCSCHHHH-----HTTCCSEEEEEEEETTC
T ss_pred cC-CC----CCchhhhhcCCCeeehheehHHHHHHHHhCCCccEEEEEeccccccccc-----cCCCcceEEEEEEECCC
Confidence 32 21 1122234578999999999999999999998899999987653221100 11356899999999999
Q ss_pred cEEEEEEEEeecCCCCceEEEEEecCCeeeeeccc-ceeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHHHHH
Q 017143 246 SRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPE-SIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLNFLS 324 (376)
Q Consensus 246 ~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~ 324 (376)
.++++..++.... ....+++|+|++|++.++... ..+..... .+.... ..... +.....+.+..++++|++
T Consensus 222 ~~~~~~~s~~~~~-~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~----~~~~~~--~~~~~-~~~~~~~~~~~~~~~f~~ 293 (331)
T 4hkt_A 222 KQAIISNSRRATY-GYDQRIEVHGSKGAVAAENQRPVSIEIATG----DGYTRP--PLHDF-FMTRYTEAYANEIESFIA 293 (331)
T ss_dssp CEEEEEEESCCTT-CCEEEEEEEESSCEEEECCCCSCCEEEEET----TEEEEC--CCCSS-HHHHTHHHHHHHHHHHHH
T ss_pred CEEEEEEecccCC-CCccEEEEEeCceEEEeccCCCccEEEEcC----CCcccC--CCCcc-chhhhhHHHHHHHHHHHH
Confidence 9999998875433 235689999999999986532 22222111 111110 00000 000112345678999999
Q ss_pred HHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEe
Q 017143 325 AIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAI 363 (376)
Q Consensus 325 ~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~ 363 (376)
+|+ ++.++.++++++++++++++|+++|+++|++|.|
T Consensus 294 ~i~--~~~~~~~~~~d~~~~~~i~~a~~~S~~~g~~V~l 330 (331)
T 4hkt_A 294 AIE--KGAEIAPSGNDGLAALALADAAVRSVAEKRQISI 330 (331)
T ss_dssp HHH--TTCCCSSCHHHHHHHHHHHHHHHHHHHHTBCEEC
T ss_pred HHh--CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEec
Confidence 999 6777889999999999999999999999999987
No 28
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=100.00 E-value=1.7e-55 Score=411.39 Aligned_cols=327 Identities=17% Similarity=0.179 Sum_probs=259.2
Q ss_pred ceeEEEEeCChhhH-HHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGR-EHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~-~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
|+||||||+|.+|+ .|++.+... ++++|++|||++ . +++++++++++ +..|+|+++||+++++|+|+||||
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~-~----~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 74 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIR--ETLEVKTIFDLH-V----NEKAAAPFKEKGVNFTADLNELLTDPEIELITICTP 74 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECTT-C----CHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSC
T ss_pred eeEEEEEccCHHHHHHHHHHHhhC--CCeEEEEEECCC-H----HHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCC
Confidence 59999999999998 699999887 899999999998 2 44566664333 458999999999999999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEE
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAI 163 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~ 163 (376)
+..|++++++||+ +||||+||||++.+.+|+++|.++|+ ++|+.+++++++||.|.++.+|++|++|.||+|..+++
T Consensus 75 ~~~h~~~~~~al~--aGk~Vl~EKP~a~~~~e~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~ 151 (349)
T 3i23_A 75 AHTHYDLAKQAIL--AGKSVIVEKPFCDTLEHAEELFALGQ-EKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEINEVET 151 (349)
T ss_dssp GGGHHHHHHHHHH--TTCEEEECSCSCSSHHHHHHHHHHHH-HTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEEEEEE
T ss_pred cHHHHHHHHHHHH--cCCEEEEECCCcCCHHHHHHHHHHHH-HcCCeEEEEecccCCHHHHHHHHHHhcCCCCCEEEEEE
Confidence 9999999999999 99999999999999999999999995 45999999999999999999999999999999999998
Q ss_pred eeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEec
Q 017143 164 REHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFE 243 (376)
Q Consensus 164 ~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 243 (376)
.+.++.. ...|+.+. .+||+++|+|+|.+|+++||+| +|.+|++....... ..+++|.+.++|+|+
T Consensus 152 ~~~~~~~---~~~w~~~~-~ggG~l~d~g~H~id~~~~l~G-~p~~V~a~~~~~~~---------~~~~~d~~~~~l~~~ 217 (349)
T 3i23_A 152 HIDYYRP---GSITEQGP-KENGSFYGLGIHLMDRMIALFG-RPDQVTYDIRNNEV---------SEAVDNYFDVDLHYG 217 (349)
T ss_dssp ECCCBCT---TSCCSCCC-GGGSHHHHTHHHHHHHHHHHHC-CCSEEEECEECSSS---------TTSCCCEEEEEEEET
T ss_pred EecccCC---chhhcccC-CCCCeehhhhhHHHHHHHHHhC-CCeEEEEEEEeeCC---------CCCcceEEEEEEEeC
Confidence 6543221 16787666 7899999999999999999999 89999997654221 136789999999999
Q ss_pred CCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccc---eeeeecccC---------CccceEEeeccCc-cccc-cC
Q 017143 244 NGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPES---IVRFATREA---------GREDVQTLKAEDD-RIEY-EG 309 (376)
Q Consensus 244 ~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~---~~~~~~~~~---------~~~~~~~~~~~~~-~~~~-~~ 309 (376)
||..+++.+++..+.. ..+++|+|++|++.+...+. .+....... ...+......... .... ..
T Consensus 218 ~G~~~~~~~s~~~~~~--~~~~~i~G~~G~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~ 295 (349)
T 3i23_A 218 SKLKVKVKTNHSVASP--YPRFIVHGSNGSFIKYGEDQQENDLKAGIMPDAPGFGEDSPMYYGEVTYRNGNGDWIKKQIK 295 (349)
T ss_dssp TTEEEEEEECSBCSSC--CCSEEEEESSEEEEECSCCCHHHHHTTTCCTTSTTTTCCCGGGCEEEEEECTTSCEEEEEEC
T ss_pred CCcEEEEEEecccCCC--CCEEEEEecceEEEEcCCCchHHHHhcCCCCCCCCCCCCchhhceEEEeccCCCceeeeecC
Confidence 9999999988765433 34799999999998643211 011000000 0001111111111 0000 11
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCE
Q 017143 310 LHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRF 360 (376)
Q Consensus 310 ~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~ 360 (376)
...+.+..++++|+++|+ ++.++++++++++++++|++|+++|+++|+.
T Consensus 296 ~~~~~~~~~~~~f~~ai~--~g~~~~~~~~da~~~~~ii~a~~~Sa~~Gr~ 344 (349)
T 3i23_A 296 TPVGDYGRYYDAVYETLK--NGAPQLVTKEQALTNIEILEAGFLNPSPSVY 344 (349)
T ss_dssp CCCCCTTHHHHHHHHHHH--HCCCCSSCHHHHHHHHHHHHHTTTSCSSEEE
T ss_pred CCCCCHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHhHHHHHh
Confidence 123567789999999999 6677889999999999999999999998765
No 29
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=100.00 E-value=1e-55 Score=414.11 Aligned_cols=333 Identities=19% Similarity=0.216 Sum_probs=264.9
Q ss_pred CCCCCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 1 MAANDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|+ |+++||||||+|.+|.. |++.+.+. ++++|++|||++++ ++++++++++.. +.|+|+++||+++++|+|+
T Consensus 1 M~-M~~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~a~~~~~~-~~~~~~~~ll~~~~vD~V~ 73 (359)
T 3m2t_A 1 MS-LSLIKVGLVGIGAQMQENLLPSLLQM--QDIRIVAACDSDLE---RARRVHRFISDI-PVLDNVPAMLNQVPLDAVV 73 (359)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTC--TTEEEEEEECSSHH---HHGGGGGTSCSC-CEESSHHHHHHHSCCSEEE
T ss_pred CC-CCcceEEEECCCHHHHHHHHHHHHhC--CCcEEEEEEcCCHH---HHHHHHHhcCCC-cccCCHHHHhcCCCCCEEE
Confidence 44 45799999999999985 89999888 89999999999998 677888888654 7899999999998899999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
||||+..|++++++||+ +|||||||||++.+++|+++|.+++++ +|+.+++++++||.|.++.+|++|++|.||+|.
T Consensus 74 i~tp~~~H~~~~~~al~--aGkhVl~EKPla~~~~e~~~l~~~a~~-~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~ 150 (359)
T 3m2t_A 74 MAGPPQLHFEMGLLAMS--KGVNVFVEKPPCATLEELETLIDAARR-SDVVSGVGMNFKFARPVRQLREMTQVDEFGETL 150 (359)
T ss_dssp ECSCHHHHHHHHHHHHH--TTCEEEECSCSCSSHHHHHHHHHHHHH-HTCCEEECCHHHHCHHHHHHHHHHTSGGGCCEE
T ss_pred EcCCcHHHHHHHHHHHH--CCCeEEEECCCcCCHHHHHHHHHHHHH-cCCEEEEEecccCcHHHHHHHHHHHCCCCCCeE
Confidence 99999999999999999 999999999999999999999999954 599999999999999999999999999999999
Q ss_pred EEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEE
Q 017143 160 MVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
.+++.+... .+....|+.... +||.++|+|+|.+|+++||+|.+|.+|++..... +.+|.+.++
T Consensus 151 ~~~~~~~~~--~~~~~~w~~~~~-~gg~l~d~~~H~iD~~~~l~G~~~~~V~a~~~~~-------------~~~d~~~~~ 214 (359)
T 3m2t_A 151 HIQLNHYAN--KPRAPLWGLDST-LRSFLLAQAIHTIDLAITFGDGELRRVQSSVQRH-------------DDALIVRAD 214 (359)
T ss_dssp EEEEEEECC--CCSSCCTTCSCH-HHHHHHHTHHHHHHHHHHHHCSCEEEEEEEEEEE-------------TTEEEEEEE
T ss_pred EEEEEEecC--CCCCCCcccCCC-ccchhhhcccHHHHHHHHHhCCCceEEEEEeecc-------------CCCeEEEEE
Confidence 999865432 223456765544 7899999999999999999998899999986542 246889999
Q ss_pred EEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEE----eeccCccccccCCCCCCC
Q 017143 240 VEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQT----LKAEDDRIEYEGLHHGSS 315 (376)
Q Consensus 240 l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 315 (376)
|+|+||.++++..++..+. ...+++|+|++|.+....+...+.............. ...+.+...........|
T Consensus 215 l~~~~G~~~~~~~s~~~~~--~~~~~~i~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (359)
T 3m2t_A 215 MAFSSGATASLLAGTSFPY--FEFDMKLVSSSSTLVELDNLWNITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGY 292 (359)
T ss_dssp EEETTSCEEEEEEESCSSS--CEEEEEEEETTSCEEEEETTTEEEEECTTCCBTTTBSCTTCCEEECCCTTCCBSTTTSH
T ss_pred EEECCCCEEEEEEecccCC--CceeEEEEeCCceEEEecCceEEEecCCCcceeeccCCCccccccCCCccccCcCchhH
Confidence 9999999999998886533 4568999999997543322222222111110000000 000000000011123467
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEe
Q 017143 316 YLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAI 363 (376)
Q Consensus 316 ~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~ 363 (376)
..++++|+++|+ ++.++.+++++++.++++++|+++|+++|++|..
T Consensus 293 ~~ei~~F~~ai~--~g~~~~~~~~d~l~~~~l~eai~~Sa~~~~~~~~ 338 (359)
T 3m2t_A 293 HGELHQFFQAIR--EHRRFEADFASLLPTYRVIEEICSADAVAQGLQN 338 (359)
T ss_dssp HHHHHHHHHHHH--TTCCCTTSTGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHhhhcCCCCCC
Confidence 789999999998 6777889999999999999999999999987764
No 30
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=100.00 E-value=8.2e-54 Score=413.85 Aligned_cols=358 Identities=15% Similarity=0.191 Sum_probs=272.4
Q ss_pred CCCCCceeEEEEeC----ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhCCCC
Q 017143 1 MAANDTVKYGIIGM----GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDSGLC 75 (376)
Q Consensus 1 m~~~~~~~v~iiG~----G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ 75 (376)
|++|+++||||||+ |.+|..|++.+.... ++++|++|||++++ +++++++++|++ ++.|+|+++||+++++
T Consensus 34 ~~~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~-~~~~lvav~d~~~~---~a~~~a~~~g~~~~~~~~d~~ell~~~~v 109 (479)
T 2nvw_A 34 VPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLS-SQFQIVALYNPTLK---SSLQTIEQLQLKHATGFDSLESFAQYKDI 109 (479)
T ss_dssp SGGGCCEEEEEECCCSTTSHHHHTHHHHHHHTT-TTEEEEEEECSCHH---HHHHHHHHTTCTTCEEESCHHHHHHCTTC
T ss_pred CCCCCcCEEEEEcccCCCCHHHHHHHHHHHhcC-CCeEEEEEEeCCHH---HHHHHHHHcCCCcceeeCCHHHHhcCCCC
Confidence 34567899999999 899999999998752 58999999999988 677888899975 3589999999999899
Q ss_pred CEEEEeCCCCccHHHHHHHHcCCCC------CeEEEecCCCCCHHHHHHHHHHHHhCCC-eEEEEeeccccCHHHHHHHH
Q 017143 76 DVVVVSTPNMTHYQILMDIINHPKP------HHVLVEKPLCTTVADCKKVVDAARKRPD-ILVQVGLEYRYMPPVAKLIQ 148 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~al~~~~g------~~Vl~EKP~a~~~~e~~~l~~~a~~~~~-~~~~v~~~~r~~p~~~~~k~ 148 (376)
|+|+||||+..|++++++||+ +| ||||||||++.+++|+++|.+++ +++| +.+++++++||.|.++.+|+
T Consensus 110 D~V~I~tp~~~H~~~~~~al~--aG~~~~~~khVl~EKPla~~~~ea~~l~~~a-~~~g~~~~~v~~~~R~~p~~~~~k~ 186 (479)
T 2nvw_A 110 DMIVVSVKVPEHYEVVKNILE--HSSQNLNLRYLYVEWALAASVQQAEELYSIS-QQRANLQTIICLQGRKSPYIVRAKE 186 (479)
T ss_dssp SEEEECSCHHHHHHHHHHHHH--HSSSCSSCCEEEEESSSSSSHHHHHHHHHHH-HTCTTCEEEEECGGGGCHHHHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHH--CCCCcCCceeEEEeCCCcCCHHHHHHHHHHH-HHcCCeEEEEEeccccCHHHHHHHH
Confidence 999999999999999999999 99 99999999999999999999999 5568 99999999999999999999
Q ss_pred HHHcCCCCceEEEEEeeccCCc----ccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccC---
Q 017143 149 IVKSGSIGQVKMVAIREHRFPF----LVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHK--- 221 (376)
Q Consensus 149 ~i~~g~iG~i~~~~~~~~~~~~----~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~--- 221 (376)
+|++|.||+|..+++.+..... +..+..|+.+...+||+++|+|+|.+|+++||+|.+|++|++.........
T Consensus 187 ~i~~G~iG~i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~gGG~l~d~g~H~lDl~~~l~G~~p~~V~a~~~~~~~~~~~~ 266 (479)
T 2nvw_A 187 LISEGCIGDINSIEISGNGGWYGYERPMRSPEYLYDIESGVNLISNSFGHTIDVLQYITGSYFQKINAMISNNIPTQFLL 266 (479)
T ss_dssp HHHTTTTCSEEEEEEEEECSBSSSEEETTCCGGGGCGGGSCSTTTTHHHHHHHHHHHHHTCCEEEEEEEEECCCSEEEEE
T ss_pred HHHcCCCCCeEEEEEEecCCccCCcccccccccccCcccCccHHHHHHHHHHHHHHHHHCCCCCEEEEEEEeccCccccc
Confidence 9999999999999986432111 123457887777889999999999999999999988999999876532110
Q ss_pred --cc-ccCC-CCCcccccEEEEEEecCC-cEEEEEEEEeecCC--CCceEEEEEecCCeeeeeccc-----ceeee--ec
Q 017143 222 --DE-MYNG-KVPDIIDNAYVIVEFENG-SRGMLDLCMFAEGS--KNEQEIVVVGNTGKGEAFVPE-----SIVRF--AT 287 (376)
Q Consensus 222 --~~-~~~~-~~~~~~d~~~~~l~~~~G-~~~~l~~~~~~~~~--~~~~~~~i~Gt~G~i~~~~~~-----~~~~~--~~ 287 (376)
.. .... ...+++|.+.++++|+|| +++++..++..+.. ....+++|+|++|++.++... ..+.+ ..
T Consensus 267 ~~~g~~~g~~~~~~~~D~~~~~l~f~~G~~~~~~~~s~~~~~~~~~~~~~~~I~Gt~G~i~~~~~~~~~~~~~~~~~~~~ 346 (479)
T 2nvw_A 267 DENGKRTKETISKTCPDHLLFQGILENGKVPVSCSFKGGTPVKKLTKNLVIDIHGTKGDLKIEGDAGFVEISNLVLYFYG 346 (479)
T ss_dssp C--CCCCSCEEECCSCCEEEEEEEESGGGCEEEEEEECBSSCCSSSCSEEEEEEESSCEEEEEEC------CCEEEEEEE
T ss_pred ccccccccccccCCcCeEEEEEEEECCCCEEEEEEEEeccCCCcCCCceEEEEEeCCeEEEEecCCcccccCccEEEEec
Confidence 00 0000 013578999999999999 99999877644321 445689999999999987652 11111 11
Q ss_pred ccCCc--------cce------EEe---eccCcccc-----ccCCCC-------CCCHHHHHHHHHHHHhcCCC-C----
Q 017143 288 REAGR--------EDV------QTL---KAEDDRIE-----YEGLHH-------GSSYLEHLNFLSAIRAKGAK-V---- 333 (376)
Q Consensus 288 ~~~~~--------~~~------~~~---~~~~~~~~-----~~~~~~-------~~~~~~l~~f~~~i~~~~~~-~---- 333 (376)
..... .+. ..+ ..+...+. ....+. +.+..++++|+++|+ ++. +
T Consensus 347 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~f~~~i~--~g~~~~~~~ 424 (479)
T 2nvw_A 347 IKNGNGSSNGTDNNGAAAIKDKEKVTKSPSPSTGTSEEEQTMEVFHLRNYNSVVGNILRIYESIADYHF--LGKPESKSS 424 (479)
T ss_dssp ESCC---------------------------------CCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH--C--------
T ss_pred cCCcccccccccccccccccccccccccCCCchhhhccccccCCccccccchHHHHHHHHHHHHHHHHh--cCCCccccc
Confidence 00000 000 001 00000000 000000 234568999999998 444 4
Q ss_pred --------------------CCCCHHHHHHHHHHHHHHHHHHHcCCEEEehhhh
Q 017143 334 --------------------PAVDLQDGLISVAIGVAAQLSIEKGRFIAIEEVM 367 (376)
Q Consensus 334 --------------------~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~~~ 367 (376)
+.++++|+++++++++|+++|+++|++|.+++++
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~da~~~~~i~~a~~~S~~~g~~v~v~~~~ 478 (479)
T 2nvw_A 425 RGPDDLFASTKFDKQGFRFEGFPTFKDAIILHRLIDAVFRSDKEEKTLDVSKIM 478 (479)
T ss_dssp ----------CCCCCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHTBCEECTTTT
T ss_pred ccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHhcCCeeechhcc
Confidence 7799999999999999999999999999998753
No 31
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=100.00 E-value=7.6e-54 Score=411.08 Aligned_cols=353 Identities=14% Similarity=0.143 Sum_probs=269.2
Q ss_pred CceeEEEEeC----ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIGM----GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~----G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~ 79 (376)
+++||||||+ |.+|..|++.+.+.. ++++|++|||++++ +++++++++|++ ++.|+|+++||+++++|+|+
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~-~~~~lvav~d~~~~---~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~ 94 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLS-SQFQITALYSPKIE---TSIATIQRLKLSNATAFPTLESFASSSTIDMIV 94 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTT-TTEEEEEEECSSHH---HHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcC-CCeEEEEEEeCCHH---HHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEE
Confidence 5799999999 889999999998752 58999999999988 677888899874 35899999999988899999
Q ss_pred EeCCCCccHHHHHHHHcCCCC------CeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcC
Q 017143 80 VSTPNMTHYQILMDIINHPKP------HHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSG 153 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g------~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g 153 (376)
||||+..|++++++||+ +| |||+||||++.+.+|+++|.+++ +++|+.+++++++||.|.++.+|++|++|
T Consensus 95 i~tp~~~H~~~~~~al~--aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a-~~~g~~~~v~~~~R~~p~~~~~k~~i~~G 171 (438)
T 3btv_A 95 IAIQVASHYEVVMPLLE--FSKNNPNLKYLFVEWALACSLDQAESIYKAA-AERGVQTIISLQGRKSPYILRAKELISQG 171 (438)
T ss_dssp ECSCHHHHHHHHHHHHH--HGGGCTTCCEEEEESSCCSSHHHHHHHHHHH-HTTTCEEEEECGGGGCHHHHHHHHHHHTT
T ss_pred EeCCcHHHHHHHHHHHH--CCCCcccceeEEecCcccCCHHHHHHHHHHH-HHcCCeEEEecccccCHHHHHHHHHHHcC
Confidence 99999999999999999 99 99999999999999999999999 56699999999999999999999999999
Q ss_pred CCCceEEEEEeeccCC----cccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCc-cc-c--
Q 017143 154 SIGQVKMVAIREHRFP----FLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKD-EM-Y-- 225 (376)
Q Consensus 154 ~iG~i~~~~~~~~~~~----~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~-~~-~-- 225 (376)
.||+|..+++.+.... .+.....|+.+...+||+++|+|+|.+|+++|++|.+|++|++.......... .. .
T Consensus 172 ~iG~i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~gGG~l~d~g~H~lDl~~~l~G~~~~~V~a~~~~~~~~~~~~d~~~~ 251 (438)
T 3btv_A 172 YIGDINSIEIAGNGGWYGYERPVKSPKYIYEIGNGVDLVTTTFGHTIDILQYMTSSYFSRINAMVFNNIPEQELIDERGN 251 (438)
T ss_dssp TTCSEEEEEEEEECSSSSSEEETTSCGGGGSTTSSCSTTTTHHHHHHHHHHHHHTCCEEEEEEEEECCCSEEEEECTTSC
T ss_pred CCCCcEEEEEEEccCcccccccCCccccccccccCCCeeeeeeeeHHHHHHHHhCCCceEEEEEeeccCCcccccccccc
Confidence 9999999988643211 11234578877778899999999999999999999889999998754321100 00 0
Q ss_pred -CC--CCCcccccEEEEEEecCC-cEEEEEEEEeecCC--CCceEEEEEecCCeeeeeccc-----ceeeeeccc-CC-c
Q 017143 226 -NG--KVPDIIDNAYVIVEFENG-SRGMLDLCMFAEGS--KNEQEIVVVGNTGKGEAFVPE-----SIVRFATRE-AG-R 292 (376)
Q Consensus 226 -~~--~~~~~~d~~~~~l~~~~G-~~~~l~~~~~~~~~--~~~~~~~i~Gt~G~i~~~~~~-----~~~~~~~~~-~~-~ 292 (376)
.+ ...+++|.+.++++|+|| +++++..++..... ....+++|+|++|++.++... ..+.+.... .+ .
T Consensus 252 ~~g~~~~~~~~D~~~~~l~~~~G~~~~~~~~s~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~l~~~~~~~~~~~ 331 (438)
T 3btv_A 252 RLGQRVPKTVPDHLLFQGTLLNGNVPVSCSFKGGKPTKKFTKNLVIDIHGTKRDLKLEGDAGFAEISNLVLYYSGTRAND 331 (438)
T ss_dssp EEEEEEECCSCSEEEEEEEETTTTEEEEEEEESSCCC---CCSEEEEEEESSCEEEEECC-----CCEEEEEEEC-----
T ss_pred ccccccCCCCCceEEEEEEECCCcEEEEEEEEccCCCCCCCCCeEEEEEecCcEEEEecCccccccCceEEEeccCcccc
Confidence 00 012578999999999999 99998877543321 345689999999999987541 122211010 00 0
Q ss_pred cce---EEeeccCccc------cc---cCC--CCCCCHHHHHHHHHHHHhcCCCC-----------------CCCCHHHH
Q 017143 293 EDV---QTLKAEDDRI------EY---EGL--HHGSSYLEHLNFLSAIRAKGAKV-----------------PAVDLQDG 341 (376)
Q Consensus 293 ~~~---~~~~~~~~~~------~~---~~~--~~~~~~~~l~~f~~~i~~~~~~~-----------------~~~~~~d~ 341 (376)
... ..+....... .. .+. ..+.+..++++|++ |+ ++.+ +.++++|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~-i~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 408 (438)
T 3btv_A 332 FPLANGQQAPLDPGYDAGKEIMEVYHLRNYNAIVGNIHRLYQSISD-FH--FNTKKIPELPSQFVMQGFDFEGFPTLMDA 408 (438)
T ss_dssp -----------------CCEEEEEECCSSCCHHHHHHHHHHHHHHH-HH--TTTTCCTTCCSCCSCCTTCSSSCCCHHHH
T ss_pred ccccccceeecCcccccccccCCCcccccCChHHHHHHHHHHHHHH-Hh--CCCCccccccccccccccccCCCCCHHHH
Confidence 000 0111110000 00 000 01233468999999 98 5555 78999999
Q ss_pred HHHHHHHHHHHHHHHcCCEEEehhhh
Q 017143 342 LISVAIGVAAQLSIEKGRFIAIEEVM 367 (376)
Q Consensus 342 ~~~~~ii~a~~~S~~~g~~v~~~~~~ 367 (376)
++++++++|+++|+++|++|.+++..
T Consensus 409 ~~~~~i~~a~~~Sa~~g~~V~~~~~~ 434 (438)
T 3btv_A 409 LILHRLIESVYKSNMMGSTLNVSNIS 434 (438)
T ss_dssp HHHHHHHHHHHHHHHHTBCEECTTTT
T ss_pred HHHHHHHHHHHHHHhcCCeEEecccc
Confidence 99999999999999999999998654
No 32
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=100.00 E-value=3.3e-54 Score=407.99 Aligned_cols=336 Identities=18% Similarity=0.223 Sum_probs=259.7
Q ss_pred CceeEEEEeCC-hhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 5 DTVKYGIIGMG-MMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 5 ~~~~v~iiG~G-~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
+++||||||+| .+|..|++.+... ++++|++|||++++ +++++++++|++ .|+|+++|++++++|+|+|+||
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~a~~~g~~--~~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHH--PDAQIVAACDPNED---VRERFGKEYGIP--VFATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHC--TTEEEEEEECSCHH---HHHHHHHHHTCC--EESSHHHHHHHSCCSEEEECSC
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhC--CCeEEEEEEeCCHH---HHHHHHHHcCCC--eECCHHHHHcCCCCCEEEEcCC
Confidence 36999999999 8889999999988 89999999999988 677888899976 8999999999989999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEE
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAI 163 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~ 163 (376)
+..|++++++||+ +||||+||||++.+++|+++|.+++++ +|+.+++++++||.|.++.+|++|++|.||+|..++.
T Consensus 74 ~~~H~~~~~~al~--aGk~Vl~EKP~a~~~~e~~~l~~~a~~-~g~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i~~~~~ 150 (387)
T 3moi_A 74 HQFHCEHVVQASE--QGLHIIVEKPLTLSRDEADRMIEAVER-AGVHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSMLNC 150 (387)
T ss_dssp GGGHHHHHHHHHH--TTCEEEECSCCCSCHHHHHHHHHHHHH-HTCCEEECCCGGGSHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred cHHHHHHHHHHHH--CCCceeeeCCccCCHHHHHHHHHHHHH-hCCeEEEEeccccCHHHHHHHHHHhcCCCCCeEEEEE
Confidence 9999999999999 999999999999999999999999954 5999999999999999999999999999999999987
Q ss_pred eeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEec
Q 017143 164 REHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFE 243 (376)
Q Consensus 164 ~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 243 (376)
.+...........|......+||+++|+|+|.+|+++||+|.+|++|++....... ..+++|.+.++|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~ggG~l~d~g~H~id~~~~l~g~~~~~V~a~~~~~~~---------~~~~~d~~~~~l~f~ 221 (387)
T 3moi_A 151 FNYTDFLYRPRRPEELDTSKGGGIIYNQLPHQIDSIKTITGQRITAVRAMTGRLDP---------KRPTEGNCAAMLTLE 221 (387)
T ss_dssp EEECCGGGSCCCGGGGCGGGTCSHHHHTHHHHHHHHHHHHCCCEEEEEEEEECCCT---------TSCSCCEEEEEEEET
T ss_pred EeccccccCCCChhhcccccCCcchhhhHHHHHHHHHHHhCCCceEEEEEEeecCC---------CCCcceEEEEEEEEC
Confidence 43222111112223334557899999999999999999999889999998754321 125789999999999
Q ss_pred CCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce--------------------------------------eee
Q 017143 244 NGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI--------------------------------------VRF 285 (376)
Q Consensus 244 ~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~--------------------------------------~~~ 285 (376)
||.++++..++..+.. ......+.|++|.++...-... ..+
T Consensus 222 ~G~~~~~~~s~~~~~~-~~~~~~~~g~~g~~~~p~~g~~~~~~~~~g~d~qe~~l~~~~~~g~~~~~d~~~~~~~~~~~f 300 (387)
T 3moi_A 222 DGACAVMVYSGYDHFD-SDEMHFWLAEGGRAKQPNHGGARKVLRQLEGDEAELRRSRYGFGGPISKSMESGNTDRKQPHF 300 (387)
T ss_dssp TSCEEEEEEECSSSSC-GGGGTTTBCTTSSBCCCCSSHHHHHHHHCCSCHHHHHHHHHSTTSTTCCC------CCCCCCC
T ss_pred CCCEEEEEEecccCCC-CCeEEEEEEcCCeecCccccccccceeccCCcchhhhccccccCCcccccccccccccccccc
Confidence 9999999988865432 3335666677776654220000 000
Q ss_pred ecc---------cCCccceEEeeccCc-ccccc-CCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 017143 286 ATR---------EAGREDVQTLKAEDD-RIEYE-GLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLS 354 (376)
Q Consensus 286 ~~~---------~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S 354 (376)
+.. .....+...+..... ..+.. +...+.+..++++|+++|+ ++.++++++++++++++|++|+++|
T Consensus 301 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~--~g~~~~~~~e~a~~~l~v~eA~~~S 378 (387)
T 3moi_A 301 GVMLVTCEHADLRASPEGVLVYGDEGVREVPAITGRGPFSQGDTIDELRDAIA--GVAPALRDARWGKDTLEVCLAVLES 378 (387)
T ss_dssp SEEEEEESSEEEEECSSEEEEEETTEEEEEECCCCSSSTHHHHHHHHHHHHHT--TSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred CccccchhccCCCCCCCceEEecCCCceeeccCCCCCCcchHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 000 000000011111100 01111 1111225688999999998 7778899999999999999999999
Q ss_pred HHcCCEEE
Q 017143 355 IEKGRFIA 362 (376)
Q Consensus 355 ~~~g~~v~ 362 (376)
+++|++|+
T Consensus 379 a~~g~~V~ 386 (387)
T 3moi_A 379 SATGRQVE 386 (387)
T ss_dssp HHHSSCEE
T ss_pred hhcCCcCc
Confidence 99999985
No 33
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=100.00 E-value=1e-52 Score=390.57 Aligned_cols=323 Identities=22% Similarity=0.279 Sum_probs=265.3
Q ss_pred eeEEEEeCChhhHHH-HHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 7 VKYGIIGMGMMGREH-FINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~-~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
+||||||+|.+|..| ++.+.+ +++++++|||++++ +++++++++|++ ..|+|++++++++++|+|+|+||+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~---~~~~~vav~d~~~~---~~~~~~~~~g~~-~~~~~~~~~l~~~~~D~V~i~tp~~ 73 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA---TGGEVVSMMSTSAE---RGAAYATENGIG-KSVTSVEELVGDPDVDAVYVSTTNE 73 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH---TTCEEEEEECSCHH---HHHHHHHHTTCS-CCBSCHHHHHTCTTCCEEEECSCGG
T ss_pred CeEEEEcccHHHHHhhhHHhhc---CCCeEEEEECCCHH---HHHHHHHHcCCC-cccCCHHHHhcCCCCCEEEEeCChh
Confidence 589999999999987 788876 58999999999988 677888889975 6899999999988899999999999
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEee
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIRE 165 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~~ 165 (376)
.|.+++++||+ +||||+||||++.+.+++++|.+++++ +|+.+++++++||.|.++.+|+++++|.||+|..+++.+
T Consensus 74 ~h~~~~~~al~--~Gk~v~~ekP~~~~~~~~~~l~~~a~~-~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i~~v~~~~ 150 (332)
T 2glx_A 74 LHREQTLAAIR--AGKHVLCEKPLAMTLEDAREMVVAARE-AGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRPIAARVFH 150 (332)
T ss_dssp GHHHHHHHHHH--TTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECCCGGGSHHHHHHHHHHHTTTTSSEEEEEEEE
T ss_pred HhHHHHHHHHH--CCCeEEEeCCCcCCHHHHHHHHHHHHH-cCCEEEEeehhhcCHHHHHHHHHHHcCCCCCeEEEEEEE
Confidence 99999999999 899999999999999999999999954 599999999999999999999999999999999999865
Q ss_pred ccCCcccccCccccc-cccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecC
Q 017143 166 HRFPFLVKVNDWNRF-NENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFEN 244 (376)
Q Consensus 166 ~~~~~~~~~~~w~~~-~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~ 244 (376)
.... ...+.+|+.+ ...+||.++|+|+|.+|+++||+|.+|.+|++....... ...+++|.+.++++|+|
T Consensus 151 ~~~~-~~~~~~w~~~~~~~ggG~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~~~--------~~~~~~d~~~~~l~~~~ 221 (332)
T 2glx_A 151 AVYL-PPHLQGWRLERPEAGGGVILDITVHDADTLRFVLNDDPAEAVAISHSAGM--------GKEGVEDGVMGVLRFQS 221 (332)
T ss_dssp ECBC-CGGGTTGGGSCTTTTCSHHHHTHHHHHHHHHHHHTSCEEEEEEEEECCSS--------SCTTCCSEEEEEEEETT
T ss_pred cccC-CCCCCCcccccCCCCCchHhhhhHHHHHHHHHHcCCCCcEEEEEEecCCC--------CCCCccceEEEEEEECC
Confidence 4432 2345678776 557899999999999999999999789999998643211 01257899999999999
Q ss_pred CcEEEEEEEEeecCCCCceEEEEEecCCeeeeecc-cc----eeeeecccCCccceEEeeccCccccccCCCCCCCHHHH
Q 017143 245 GSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVP-ES----IVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEH 319 (376)
Q Consensus 245 G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (376)
|.++++.+++... ....+++|+|++|++.+... .. .+.+... .+...+. . ...+.+..++
T Consensus 222 G~~~~~~~s~~~~--~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~----~~~~~~~-------~--~~~~~~~~~~ 286 (332)
T 2glx_A 222 GVIAQFHDAFTTK--FAETGFEVHGTEGSLIGRNVMTQKPVGTVTLRNA----EGESQLP-------L--DPANLYETAL 286 (332)
T ss_dssp SCEEEEEEESBCS--SCCCEEEEEESSCEEEEESCSSSSSCCEEEEEET----TEEEECC-------C--CCCCHHHHHH
T ss_pred CcEEEEEEEeecC--CCCceEEEEECceEEEeecccCCCCCceEEEEcC----CCceEEe-------c--CCcchHHHHH
Confidence 9999999887543 34458999999999965321 11 1111110 0111111 1 1123556789
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEehh
Q 017143 320 LNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIEE 365 (376)
Q Consensus 320 ~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~~ 365 (376)
++|+++|+ ++.++.++++++++++++++|+++|+++|++|.++.
T Consensus 287 ~~f~~~i~--~~~~~~~~~~~~~~~~~i~~a~~~S~~~g~~v~~~~ 330 (332)
T 2glx_A 287 AAFHSAIE--GHGQPSATGEDGVWSLATGLAVVKAAATGQAAEIET 330 (332)
T ss_dssp HHHHHHHT--TSSCCSSBHHHHHHHHHHHHHHHHHHHHSSCEECCC
T ss_pred HHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHhhcCceEecCC
Confidence 99999998 667788999999999999999999999999999864
No 34
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=100.00 E-value=4.2e-53 Score=393.54 Aligned_cols=328 Identities=15% Similarity=0.159 Sum_probs=254.4
Q ss_pred CCceeEEEEeCChhhH-HHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 4 NDTVKYGIIGMGMMGR-EHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
|+++||||||+|.+|. .+++.+. . ++++|++|||++++ ++++++++|+.. +.|+|+++||+++++|+|+|+|
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~--~~~~lvav~d~~~~---~~~~~a~~~~~~-~~~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-D--AGAELAGVFESDSD---NRAKFTSLFPSV-PFAASAEQLITDASIDLIACAV 74 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-H--TTCEEEEEECSCTT---SCHHHHHHSTTC-CBCSCHHHHHTCTTCCEEEECS
T ss_pred CCccEEEEECCChHHHHHhhhhhc-C--CCcEEEEEeCCCHH---HHHHHHHhcCCC-cccCCHHHHhhCCCCCEEEEeC
Confidence 4679999999999986 6777775 3 68999999999998 567888888543 6899999999998999999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHH-HHHHHHHHHcCCCCceEEE
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPP-VAKLIQIVKSGSIGQVKMV 161 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~-~~~~k~~i~~g~iG~i~~~ 161 (376)
|+..|++++++||+ +||||+||||++.+.+|+++|.++++ ++|+.+++++++||.|. ++.+|++|++|.||+|..+
T Consensus 75 p~~~h~~~~~~al~--aGkhVl~EKP~a~~~~e~~~l~~~a~-~~g~~~~v~~~~R~~p~~~~~~~~~i~~g~iG~i~~v 151 (336)
T 2p2s_A 75 IPCDRAELALRTLD--AGKDFFTAKPPLTTLEQLDAVQRRVA-ETGRKFAVYFNERINVDSALFAGELVQRGEIGRVIQT 151 (336)
T ss_dssp CGGGHHHHHHHHHH--TTCEEEECSSCCSCHHHHHHHHHHHH-HHCCCEEECCTTTTTCHHHHHHHHHHHTTTTSSEEEE
T ss_pred ChhhHHHHHHHHHH--CCCcEEEeCCCCCCHHHHHHHHHHHH-HcCCEEEEeeccccCcHHHHHHHHHHhCCCCCceEEE
Confidence 99999999999999 99999999999999999999999995 45999999999999998 9999999999999999999
Q ss_pred EEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCC-CeEEEEecccccccCccccCCCCCcccccEEEEE
Q 017143 162 AIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSN-PMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIV 240 (376)
Q Consensus 162 ~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~-~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l 240 (376)
++.+..... ..+.+|+.+...+||.++|+|+|.+|+++||+|.+ +.+|++........ ...+++|.+.+++
T Consensus 152 ~~~~~~~~~-~~~~~w~~~~~~~gG~l~d~g~H~id~~~~l~G~~~~~~v~a~~~~~~~~-------~~~~~~d~~~~~l 223 (336)
T 2p2s_A 152 MGVGPHRER-GARPDWFYQKRQYGGILCDIGIHQIEQFLYFTGNTNARVVTSQTANYHHP-------HHPEFEDFGDAML 223 (336)
T ss_dssp EEEEECBCC-SCCCGGGGCHHHHCCHHHHTHHHHHHHHHHHHTCSCEEEEEEEEECSSCT-------TSTTCCSEEEEEE
T ss_pred EEEccccCC-CCCCCceecccccCCeeehhhhhHHHHHHHHhCCCCceEEEEeEEeecCC-------CCCCccchheEEE
Confidence 875322111 13467887777789999999999999999999975 68888876432111 1235789999999
Q ss_pred EecCCcEEEEEEEEeecCCC---CceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHH
Q 017143 241 EFENGSRGMLDLCMFAEGSK---NEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYL 317 (376)
Q Consensus 241 ~~~~G~~~~l~~~~~~~~~~---~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (376)
+|+||.++++..++..+... ...+++|+|++|++.++..... . ........+............ ....+.
T Consensus 224 ~~~~G~~~~~~~s~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 296 (336)
T 2p2s_A 224 LGDNGATGYFRCDWFTPDGLSVWGDGRLTILGTEGYIEIRKYVDL---T---RGESNVVYLVNGKGEQRFTPA-GSVERA 296 (336)
T ss_dssp EETTSCEEEEEEESBCCTTSSSSCCCEEEEEESSCEEEEECSCBT---T---TTBCSEEEEESSSCEEEECCT-TSSCCC
T ss_pred EECCCcEEEEEEEecCCCCccccCCceEEEEecceEEEEeccccc---c---cCCCceEEeecCCCcceeccC-CCccHH
Confidence 99999999999888665432 2458999999999998632110 0 000000111000000000000 001123
Q ss_pred HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 017143 318 EHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKG 358 (376)
Q Consensus 318 ~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g 358 (376)
.+.+|+++++ ++.++.++++++++++++++|+++|++++
T Consensus 297 ~~~~f~~~i~--~~~~~~~~~~d~l~~~~i~~a~~~Sa~~~ 335 (336)
T 2p2s_A 297 FFPDFLRDCR--ERTENAMSQSHIFKATELSILAQQAANKI 335 (336)
T ss_dssp HHHHHHHHHH--HCCCCSSCHHHHHHHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 4679999998 55667799999999999999999999875
No 35
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=100.00 E-value=4.5e-53 Score=395.18 Aligned_cols=336 Identities=20% Similarity=0.271 Sum_probs=265.4
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhh-hhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLH-HLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~-~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
.++++++||||||+|.+|..|++.+. +. +++++++|||++++ +++++++++|++ ..|+|++++++++++|+|+
T Consensus 3 ~~~~~~~~v~iiG~G~ig~~~~~~l~~~~--~~~~~vav~d~~~~---~~~~~a~~~g~~-~~~~~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 3 VTTRKPLRAAIIGLGRLGERHARHLVNKI--QGVKLVAACALDSN---QLEWAKNELGVE-TTYTNYKDMIDTENIDAIF 76 (346)
T ss_dssp --CCCCEEEEEECCSTTHHHHHHHHHHTC--SSEEEEEEECSCHH---HHHHHHHTTCCS-EEESCHHHHHTTSCCSEEE
T ss_pred CCCCCcceEEEEcCCHHHHHHHHHHHhcC--CCcEEEEEecCCHH---HHHHHHHHhCCC-cccCCHHHHhcCCCCCEEE
Confidence 03456899999999999999999998 66 79999999999988 677788889975 6899999999987899999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCC-CeEEEEeeccccCHHHHHHHHHHHcCCCCce
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRP-DILVQVGLEYRYMPPVAKLIQIVKSGSIGQV 158 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~-~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 158 (376)
|+||+..|.+++++||+ +||||+||||++.+.+++++|.+++ +++ ++.++++++.||.|.++.+|+++++|.||+|
T Consensus 77 i~tp~~~h~~~~~~al~--~G~~v~~eKp~~~~~~~~~~l~~~a-~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i 153 (346)
T 3cea_A 77 IVAPTPFHPEMTIYAMN--AGLNVFCEKPLGLDFNEVDEMAKVI-KSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKI 153 (346)
T ss_dssp ECSCGGGHHHHHHHHHH--TTCEEEECSCCCSCHHHHHHHHHHH-HTCTTSCEECCCGGGTCHHHHHHHHHHHTTTTCSE
T ss_pred EeCChHhHHHHHHHHHH--CCCEEEEcCCCCCCHHHHHHHHHHH-HhCCCCeEEEecccccCHHHHHHHHHHHcCCCCCe
Confidence 99999999999999999 8999999999999999999999999 667 9999999999999999999999999999999
Q ss_pred EEEEEeeccCCcccccCcccccc-c--cCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCccccc
Q 017143 159 KMVAIREHRFPFLVKVNDWNRFN-E--NTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDN 235 (376)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~w~~~~-~--~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~ 235 (376)
..+++.+.. +. .+..|+... . .+||+++|+|+|.+|+++||+|.+|.+|++........... ..+.+|.
T Consensus 154 ~~v~~~~~~-~~--~~~~~~~~~~~~~~~gG~l~d~g~H~lD~~~~l~G~~~~~V~a~~~~~~~~~~~-----~~~~~D~ 225 (346)
T 3cea_A 154 IYMRGYGID-PI--SGMESFTKFATEADSGGIFVDMNIHDIDLIRWFTGQDPVQAYGLTSNIAAPQLA-----DIGEFET 225 (346)
T ss_dssp EEEEEEEEE-EG--GGHHHHHHHHHHSCCCCHHHHTTHHHHHHHHHHHSCCEEEEEEEEECSSCGGGG-----GGTCCSE
T ss_pred EEEEEEecC-CC--CCChhHhhhcccCCCCchHHHhhccHHHHHHHHcCCCCeEEEEEEeeccCcccc-----ccCCcee
Confidence 999885322 11 123343332 2 28999999999999999999997799999986543211100 0123588
Q ss_pred EEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeeccc--ceeeeecccCCccceEEeeccCccccccCCCCC
Q 017143 236 AYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPE--SIVRFATREAGREDVQTLKAEDDRIEYEGLHHG 313 (376)
Q Consensus 236 ~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (376)
+.++++|+||.++++..++..+.. ...+++|+|++|++.++... ..+..... .+... .. .. .+.....+
T Consensus 226 ~~~~l~~~~G~~~~~~~s~~~~~~-~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~----~~~~~-~~-~~--~~~~~~~~ 296 (346)
T 3cea_A 226 GVAQLKMSDGVIATLIGGRHAAHG-NQVELEVMGSNGWVRIGEHPDLNRVTVFND----QGVVR-PS-LQ--SFGERFDT 296 (346)
T ss_dssp EEEEEEETTSCEEEEEEEEEESSS-CEEEEEEEESSCEEEECSSCBCSSEEEEET----TEEEE-CB-CC--CHHHHSHH
T ss_pred EEEEEEECCCcEEEEEEEEecCCC-CceEEEEEECCCEEEEcCCCCCccEEEEeC----CCccc-CC-Cc--chhhHhhH
Confidence 999999999999999998865432 34589999999999986543 12222111 01100 00 00 00001123
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEEEeh
Q 017143 314 SSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFIAIE 364 (376)
Q Consensus 314 ~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v~~~ 364 (376)
.+..++++|+++|+ ++.++.++++++++++++++|+++|+++|++|.|+
T Consensus 297 ~~~~~~~~f~~~i~--~~~~~~~~~~~~~~~~~i~~a~~~S~~~g~~v~~~ 345 (346)
T 3cea_A 297 AFTDEVQDFVNNVI--VGKQPEVTVDDGIKALKIAKACQQSANIGKLVDIQ 345 (346)
T ss_dssp HHHHHHHHHHHHHH--HTCCCSSCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred HHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCeEecC
Confidence 45578999999998 55667799999999999999999999999999984
No 36
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=100.00 E-value=1.4e-53 Score=397.92 Aligned_cols=327 Identities=15% Similarity=0.120 Sum_probs=252.3
Q ss_pred ceeEEEEeCChhhHH-HHH-HhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGRE-HFI-NLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~-~~~-~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
++||||||+|.+|+. |++ .+... ++++|++|||+++++ ++..++..++ ..|+|+++|++++++|+|+||||
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~--~~~~l~av~d~~~~~---~~~~~~~~~~--~~~~~~~~ll~~~~~D~V~i~tp 74 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRK--DSWHVAHIFRRHAKP---EEQAPIYSHI--HFTSDLDEVLNDPDVKLVVVCTH 74 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCT--TTEEEEEEECSSCCG---GGGSGGGTTC--EEESCTHHHHTCTTEEEEEECSC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcC--CCeEEEEEEcCCHhH---HHHHHhcCCC--ceECCHHHHhcCCCCCEEEEcCC
Confidence 599999999999985 888 66766 899999999999874 3333333354 58999999999999999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEE
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAI 163 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~ 163 (376)
+..|++++++|++ +||||+||||++.+++|+++|.+++++ +|+.+++++++||.|.++.+|++|++|.||+|..+++
T Consensus 75 ~~~h~~~~~~al~--aGk~Vl~EKP~a~~~~e~~~l~~~a~~-~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~~~~ 151 (345)
T 3f4l_A 75 ADSHFEYAKRALE--AGKNVLVEKPFTPTLAQAKELFALAKS-KGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVES 151 (345)
T ss_dssp GGGHHHHHHHHHH--TTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECCGGGGCHHHHHHHHHHHHSTTCSEEEEEE
T ss_pred hHHHHHHHHHHHH--cCCcEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEEechhcCHHHHHHHHHHhcCCCCCeEEEEE
Confidence 9999999999999 999999999999999999999999954 5999999999999999999999999999999999998
Q ss_pred eeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEec
Q 017143 164 REHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFE 243 (376)
Q Consensus 164 ~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 243 (376)
++.++. +..|......+||+++|+|+|.+|+++||+| +|.+|++....... ..+++|.+.++|+|+
T Consensus 152 ~~~~~~----~~~~~~~~~~~gG~l~d~g~H~id~~~~l~G-~~~~v~a~~~~~~~---------~~~~~d~~~~~l~~~ 217 (345)
T 3f4l_A 152 HFDYYR----PVAETKPGLPQDGAFYGLGVHTMDQIISLFG-RPDHVAYDIRSLRN---------KANPDDTFEAQLFYG 217 (345)
T ss_dssp ECCCBC----CCCCCCCCCGGGSHHHHTHHHHHHHHHHHHC-SCSEEEEEEECCSC---------TTSSCCEEEEEEEET
T ss_pred EeeccC----CccccCCCCCCCchhheehHHHHHHHHHHhC-CCeEEEEEEEEecC---------CCCcceEEEEEEEEC
Confidence 653321 2334444557899999999999999999999 79999997654321 136789999999999
Q ss_pred CCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce---eeeeccc-------CCccceEEeeccCcc-c-cccCCC
Q 017143 244 NGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI---VRFATRE-------AGREDVQTLKAEDDR-I-EYEGLH 311 (376)
Q Consensus 244 ~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~-~-~~~~~~ 311 (376)
||. +++..++.... ...+++|+|++|++.++..+.. +...... ....+...+...... . ......
T Consensus 218 ~~~-~~~~~s~~~~~--~~~~~~i~G~~G~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 294 (345)
T 3f4l_A 218 DLK-AIVKTSHLVKI--DYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREEMKPE 294 (345)
T ss_dssp TEE-EEEEECSBCSS--CCCSEEEEESSEEEEECSCCSHHHHHHTTCCTTSTTTTCCCCCEEEEEECTTSCEEEEEECCC
T ss_pred CEE-EEEEEEecccC--CCCEEEEEecceEEEEeCCChhHHHHhcCCCCCCCCCCcCCCcceEEEecCCCcccceecCCC
Confidence 965 56665554432 3347999999999986432211 0000000 000111111111110 0 011122
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCEE
Q 017143 312 HGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRFI 361 (376)
Q Consensus 312 ~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~v 361 (376)
.+.+..++++|+++|+ ++.+++++.+|++++++|++|+++|+++|++.
T Consensus 295 ~~~~~~~~~~f~~ai~--~g~~~~~~~~da~~~~~iiea~~~Sa~~g~~~ 342 (345)
T 3f4l_A 295 MGDYGRVYDALYQTIT--HGAPNYVKESEVLTNLEILERGFEQASPSTVT 342 (345)
T ss_dssp CCCTTHHHHHHHHHHH--HCCCCSSCHHHHHHHHHHHHHTTSSSSSEEEE
T ss_pred CCCHHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHhhhcCccc
Confidence 4567789999999999 66778899999999999999999999998753
No 37
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=100.00 E-value=1.8e-52 Score=402.65 Aligned_cols=359 Identities=15% Similarity=0.103 Sum_probs=263.5
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccC----CHHHHhhCCCCCE
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFP----GHQELLDSGLCDV 77 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~l~~~~~D~ 77 (376)
+|+++||||||+|.+|..|++.+... ++++|++|||+++++.+.+.+...++|++ ++.|+ |+++||+++++|+
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~--~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~ 94 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARR--DDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDA 94 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCE
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhC--CCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCE
Confidence 45689999999999999999999988 89999999999998544333322356764 36788 9999999989999
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCc
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQ 157 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 157 (376)
|+||||+..|.+++++||+ +||||+||||++.+++|+++|.++|+ ++|+.++++++.||.|.++.+|++|++|.||+
T Consensus 95 V~i~tp~~~h~~~~~~al~--aGkhV~~EKP~a~~~~ea~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~~~~i~~G~iG~ 171 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAMK--AGKIVGMEVSGAITLEECWDYVKVSE-QTGVPLMALENVCYRRDVMAILNMVRKGMFGE 171 (444)
T ss_dssp EEECCCGGGHHHHHHHHHH--TTCEEEECCCCCSSHHHHHHHHHHHH-HHCCCEEECCGGGGCHHHHHHHHHHHTTTTCS
T ss_pred EEEcCCcHHHHHHHHHHHH--CCCeEEEeCCCcCCHHHHHHHHHHHH-HhCCeEEEEeccccCHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999 99999999999999999999999995 45999999999999999999999999999999
Q ss_pred eEEEEEeeccCC-------cc--------------cccCcccccccc----------CCc-ccccccccHHHHHHHHhCC
Q 017143 158 VKMVAIREHRFP-------FL--------------VKVNDWNRFNEN----------TGG-TLVEKCCHFFDLMRLFVGS 205 (376)
Q Consensus 158 i~~~~~~~~~~~-------~~--------------~~~~~w~~~~~~----------~gG-~l~d~g~H~ld~~~~l~G~ 205 (376)
|..+++.+.... .. +....|+..... +|| ++.|+++|.+|+++||+|.
T Consensus 172 i~~v~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~g~~~~~~ggG~vl~d~giH~~D~~~~l~g~ 251 (444)
T 2ixa_A 172 LVHGTGGYQHDLRPVLFNSGINGKNGDGVEFGEKAFSEAKWRTNHYKNRNGELYPTHGVGPLHTMMDINRGNRLLRLSSF 251 (444)
T ss_dssp EEEEEECCBCCCHHHHCBCSCTTCCSSCCBCSTTSCGGGGTHHHHHHHCCSCCCCHHHHHHHHHHHTBTTTBCEEEEEEE
T ss_pred eEEEEEEEeccchhhhcccccccccccccccccccccCCCcccchhhccCCCcccccccCHHHHhhcccccchhheeecc
Confidence 999998654211 00 022467655332 235 4999999999999999993
Q ss_pred --CCeEEEEecccccccCccccCCCCCcccccEEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeeccc--c
Q 017143 206 --NPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPE--S 281 (376)
Q Consensus 206 --~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~--~ 281 (376)
++..|.+........... ......+.+|.+.++++|+||.+++++.++..+. ....+++|+||+|++.++... .
T Consensus 252 ~~~~~~v~a~~~~~~~~~~~-~~~~~~~~~D~~~~~l~~~~G~~~~~~~s~~~~~-~~~~~~~v~Gt~G~i~~~~~~~~~ 329 (444)
T 2ixa_A 252 ASKARGLHKYIVDKGGESHP-NAKVEWKQGDIVTTQIQCHNGETIVLTHDTSLQR-PYNLGFKVQGTEGLWEDFGWGEAA 329 (444)
T ss_dssp ECCCCHHHHHHHHHHCTTSG-GGGCCCCSCSCEEEEEEETTSCEEEEEEBCSSCC-CCCCCCEEEESSCEEEECSSSCTT
T ss_pred cccccchhhhHHHhcCCCCc-ccccccccCceeEEEEEECCCCEEEEEEEeccCC-CCCceEEEEEeeeEEEecccccCC
Confidence 344444432221100000 0001124679999999999999999998876543 234589999999999985431 1
Q ss_pred e--eeeecccCCccceEEeeccCcccc-----------ccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Q 017143 282 I--VRFATREAGREDVQTLKAEDDRIE-----------YEGLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIG 348 (376)
Q Consensus 282 ~--~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii 348 (376)
. +.+.................+.+. ....+.++.+.++.+|+++|+ ++.++.+++++++++++|+
T Consensus 330 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gh~g~~~~~~~~fi~~i~--~g~~~~~~~~da~~~~~i~ 407 (444)
T 2ixa_A 330 QGFIYFEKIMNHSHRWDSSEKWIKEYDHPMWKKHEQKAVGAGHGGMDYFLDNTFVECIK--RNEAFPLDVYDLATWYSIT 407 (444)
T ss_dssp SEEEECTTTTTTCCSCEESHHHHHHTCCHHHHHHHHHHSTTSCCTHHHHHHHHHHHHHH--HTCCCSSCHHHHHHHHHHH
T ss_pred CceEEecCCCCCccccccchhhHHhcCChhhhhhhhhcccCCCCCccHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHH
Confidence 1 222111110011111000000000 002223344456789999999 6677889999999999999
Q ss_pred HHHHHHHHcC-CEEEehhhhhhh
Q 017143 349 VAAQLSIEKG-RFIAIEEVMEEL 370 (376)
Q Consensus 349 ~a~~~S~~~g-~~v~~~~~~~~~ 370 (376)
+|+++|+++| ++|.||+++.+.
T Consensus 408 ~aa~~Sa~~gg~~V~ip~~~~g~ 430 (444)
T 2ixa_A 408 PLSEKSIAENGAVQEIPDFTNGK 430 (444)
T ss_dssp HHHHHHHHTTTCCEECCCTTTTT
T ss_pred HHHHHHHHcCCceeecccccccc
Confidence 9999999998 999999986543
No 38
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=100.00 E-value=9.5e-52 Score=388.18 Aligned_cols=339 Identities=19% Similarity=0.170 Sum_probs=256.3
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--CCccCCHHHHhhCCCCCEEEE
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--LKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~D~V~i 80 (376)
+++++||||||+|.+|..|++.+... +++++++|||++++ +++++++++|++ +..|+|++++++++++|+|+|
T Consensus 3 ~~~~~~vgiiG~G~ig~~~~~~l~~~--~~~~lv~v~d~~~~---~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 3 TETQIRIGVMGCADIARKVSRAIHLA--PNATISGVASRSLE---KAKAFATANNYPESTKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp ---CEEEEEESCCTTHHHHHHHHHHC--TTEEEEEEECSSHH---HHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEE
T ss_pred CCCceEEEEECchHHHHHHHHHHhhC--CCcEEEEEEcCCHH---HHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEE
Confidence 45689999999999999999999887 89999999999988 677888899862 368999999999888999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcC-CCCceE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSG-SIGQVK 159 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g-~iG~i~ 159 (376)
+||+..|.+++++||+ +||||+||||++.+.+|+++|.++| +++|+.+++++++||+|.++.+|++|++| .||+|.
T Consensus 78 ~tp~~~h~~~~~~al~--aGk~V~~EKP~a~~~~e~~~l~~~a-~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~~iG~i~ 154 (362)
T 1ydw_A 78 PLPTSLHVEWAIKAAE--KGKHILLEKPVAMNVTEFDKIVDAC-EANGVQIMDGTMWVHNPRTALLKEFLSDSERFGQLK 154 (362)
T ss_dssp CCCGGGHHHHHHHHHT--TTCEEEECSSCSSSHHHHHHHHHHH-HTTTCCEEECCCGGGSGGGTTTTTGGGCTTTTCSEE
T ss_pred cCChHHHHHHHHHHHH--CCCeEEEecCCcCCHHHHHHHHHHH-HHcCCEEEEEEeeccCHHHHHHHHHHHhcCCccceE
Confidence 9999999999999999 9999999999999999999999999 56699999999999999999999999987 699999
Q ss_pred EEEEeeccCCcc-cccCcccccccc-CCcccccccccHHHHHHHHhCC-CCeEEEEecccccccCccccCCCCCcccccE
Q 017143 160 MVAIREHRFPFL-VKVNDWNRFNEN-TGGTLVEKCCHFFDLMRLFVGS-NPMRVMASGAVDVNHKDEMYNGKVPDIIDNA 236 (376)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~w~~~~~~-~gG~l~d~g~H~ld~~~~l~G~-~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~ 236 (376)
.+++.+...... +.+.+|+..... +||+++|+|+|.+|+++|++|. .|.+|++....... ..+++|.+
T Consensus 155 ~v~~~~~~~~~~~~~~~~wr~~~~~~ggG~l~d~g~H~id~~~~l~g~~~p~~V~a~~~~~~~---------~~~~~d~~ 225 (362)
T 1ydw_A 155 TVQSCFSFAGDEDFLKNDIRVKPGLDGLGALGDAGWYAIRATLLANNFELPKTVTAFPGAVLN---------EAGVILSC 225 (362)
T ss_dssp EEEEEEEEECCHHHHHHCGGGCTTSSTTHHHHHTHHHHHHHHHHHTTTCCCSEEEECSCCEEC---------TTSCEEEE
T ss_pred EEEEEEEecCCcccccCCcccCcccCCCceeecccHHHHHHHHHhcCCCCCeEEEEecccccc---------CCCCceEE
Confidence 998865432211 113467665554 5799999999999999999995 59999998643221 12478999
Q ss_pred EEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccce-----eeeecccCCccceEE-eeccCccccc--c
Q 017143 237 YVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESI-----VRFATREAGREDVQT-LKAEDDRIEY--E 308 (376)
Q Consensus 237 ~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~--~ 308 (376)
.++|+|+||.++++.+++... ...+++|+|++|++.++..... ..+.....+ .... ...+...... .
T Consensus 226 ~~~l~~~~G~~~~~~~s~~~~---~~~~~~i~G~~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 300 (362)
T 1ydw_A 226 GASLSWEDGRTATIYCSFLAN---LTMEITAIGTKGTLRVHDFIIPYKETEASFTTSTKA--WFNDLVTAWVSPPSEHTV 300 (362)
T ss_dssp EEEEECSSSCEEEEEEESEEE---EEEEEEEEESSEEEEESSCSSCSBTTEEEEEEEESC--CBCTTSSSBSSCCEEEEE
T ss_pred EEEEEECCCCEEEEEEEcccC---CCceEEEEeccEEEEECceeecccCCcceEEEecCc--cccccccccccCcceecc
Confidence 999999999999999887652 3468999999999998642211 000000000 0000 0000000000 0
Q ss_pred CCCCCCCHHHHHHHHHHH----HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CEEEeh
Q 017143 309 GLHHGSSYLEHLNFLSAI----RAKGAKVPAVDLQDGLISVAIGVAAQLSIEKG-RFIAIE 364 (376)
Q Consensus 309 ~~~~~~~~~~l~~f~~~i----~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g-~~v~~~ 364 (376)
.........++++|+++| ++ +..+.+.+.++++++++|++|+++|+++| ++|+++
T Consensus 301 ~~~~~~~~~~~~~f~~~i~~i~~~-g~~~~~~~~~~~l~~~~ii~a~~~S~~~g~~~V~l~ 360 (362)
T 1ydw_A 301 KTELPQEACMVREFARLVGEIKNN-GAKPDGYWPSISRKTQLVVDAVKESVDKNYQQISLS 360 (362)
T ss_dssp ECSSCHHHHHHHHHTTCC-------------CHHHHHHHHHHHHHHHHHHHHTTTCCEECC
T ss_pred CCCchHHHHHHHHHHHHHhhhhhc-CCCCCCcCHHHHHHHHHHHHHHHHHHHcCCeEEEec
Confidence 000111235789999998 42 22333466899999999999999999998 799985
No 39
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=100.00 E-value=7.4e-49 Score=363.28 Aligned_cols=310 Identities=14% Similarity=0.107 Sum_probs=239.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
|+||||||+|.+|..|++.+.+. +++++++|+|++++ +++++++++|++ ..|+|+++++ ++++|+|+|+||+.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~~~~v~d~~~~---~~~~~~~~~~~~-~~~~~~~~~l-~~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS--GEYQLVAIYSRKLE---TAATFASRYQNI-QLFDQLEVFF-KSSFDLVYIASPNS 73 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TSEEEEEEECSSHH---HHHHHGGGSSSC-EEESCHHHHH-TSSCSEEEECSCGG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC--CCeEEEEEEeCCHH---HHHHHHHHcCCC-eEeCCHHHHh-CCCCCEEEEeCChH
Confidence 48999999999999999999887 79999999999988 677888899874 6899999999 77799999999999
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEee
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIRE 165 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~~ 165 (376)
.|.+++++||+ +||||+||||++.+.+++++|.++++ ++|+.+++++++||.|.++.+|++|++ |+|..+++.+
T Consensus 74 ~h~~~~~~al~--~gk~V~~EKP~~~~~~~~~~l~~~a~-~~g~~~~~~~~~r~~p~~~~~~~~i~~---G~i~~v~~~~ 147 (325)
T 2ho3_A 74 LHFAQAKAALS--AGKHVILEKPAVSQPQEWFDLIQTAE-KNNCFIFEAARNYHEKAFTTIKNFLAD---XQVLGADFNY 147 (325)
T ss_dssp GHHHHHHHHHH--TTCEEEEESSCCSSHHHHHHHHHHHH-HTTCCEEEECTTTTCHHHHHHHHHHTT---SCEEEEEEEE
T ss_pred HHHHHHHHHHH--cCCcEEEecCCcCCHHHHHHHHHHHH-HcCCEEEEEEhhhcChHHHHHHHHhhh---cCccEEEEEe
Confidence 99999999999 99999999999999999999999995 459999999999999999999999986 7787777654
Q ss_pred ccCCc----c-cccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEE
Q 017143 166 HRFPF----L-VKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIV 240 (376)
Q Consensus 166 ~~~~~----~-~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l 240 (376)
..+.. + ....+|..+...+||.++|+|+|.+|+++||+| +|.+|++...... .+++|.+.+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~gG~l~d~g~H~ld~~~~l~G-~~~~v~a~~~~~~-----------~~~~d~~~~~l 215 (325)
T 2ho3_A 148 AKYSSKMPDLLAGQTPNVFSDRFAGGALMDLGIYPLYAAVRLFG-KANDATYHAQQLD-----------NSIDLNGDGIL 215 (325)
T ss_dssp ECCCCC------------------CCHHHHTTHHHHHHHHHHHC-SCSEEEEEEEECT-----------TSCEEEEEEEE
T ss_pred ccccccccccccCcccccCCcCCCCcchhhhHHHHHHHHHHHcC-CCcEEEEEEeecC-----------CCccceEEEEE
Confidence 32211 1 112245444557899999999999999999999 6999999765321 25788999999
Q ss_pred EecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccc--eeeeecccCCccceEEeeccCccccccCCCCCCCHHH
Q 017143 241 EFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPES--IVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLE 318 (376)
Q Consensus 241 ~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (376)
+|+||. +++..++.... ..+++|+|++|++.++.... .+..... .+. ...+. .....+.+..+
T Consensus 216 ~~~~g~-~~~~~~~~~~~---~~~~~i~G~~G~i~~~~~~~~~~~~~~~~-~g~--~~~~~--------~~~~~~~~~~e 280 (325)
T 2ho3_A 216 FYPDYQ-VHIKAGKNITS---NLPCEIYTTDGTLTLNTIEHIRSAIFTDH-QGN--QVQLP--------IQQAPHTMTEE 280 (325)
T ss_dssp ECSSCE-EEEEEESSSCC---CCCEEEEETTEEEEESCSSSCCCEEEEET-TSC--EEECC--------CCCCSSTTHHH
T ss_pred EeCCcE-EEEEEEEecCC---CCeEEEEeCCeEEEECCcCCCceEEEEeC-CCC--EEEEe--------cCCcCcchHHH
Confidence 999984 56665554322 23699999999999865432 1221111 110 11111 01123567789
Q ss_pred HHHHHHHHHhcCCCC--CCCCHHHHHHHHHHHHHHHHHHHc
Q 017143 319 HLNFLSAIRAKGAKV--PAVDLQDGLISVAIGVAAQLSIEK 357 (376)
Q Consensus 319 l~~f~~~i~~~~~~~--~~~~~~d~~~~~~ii~a~~~S~~~ 357 (376)
+++|+++|+ ++.+ +.+++++++.++++++++++|+..
T Consensus 281 ~~~f~~~i~--~g~~~~~~~~~~~~~~~~~i~~a~~~s~~~ 319 (325)
T 2ho3_A 281 VAAFAHMIQ--QPDLNLYQTWLYDAGSVHELLYTMRQTAGI 319 (325)
T ss_dssp HHHHHHHHH--SCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHH--cCCccCCCccHHHHHHHHHHHHHHHHHCCC
Confidence 999999998 5544 357899999999999999999854
No 40
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=100.00 E-value=2.8e-49 Score=363.44 Aligned_cols=305 Identities=15% Similarity=0.207 Sum_probs=240.8
Q ss_pred CCCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 3 ANDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+|+++||||||+|.+|.. |++.+.+. +++++++|||++++ +++++++++|++ .|+|++++++ ++|+|+||
T Consensus 3 ~M~~~~igiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~---~~~~~a~~~~~~--~~~~~~~ll~--~~D~V~i~ 73 (308)
T 3uuw_A 3 AMKNIKMGMIGLGSIAQKAYLPILTKS--ERFEFVGAFTPNKV---KREKICSDYRIM--PFDSIESLAK--KCDCIFLH 73 (308)
T ss_dssp --CCCEEEEECCSHHHHHHTHHHHTSC--SSSEEEEEECSCHH---HHHHHHHHHTCC--BCSCHHHHHT--TCSEEEEC
T ss_pred ccccCcEEEEecCHHHHHHHHHHHHhC--CCeEEEEEECCCHH---HHHHHHHHcCCC--CcCCHHHHHh--cCCEEEEe
Confidence 456899999999999996 89999888 89999999999998 678888899987 5999999999 59999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEE
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMV 161 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~ 161 (376)
||+..|.+++++|++ +||||+||||++.+.+++++|.+++++ +|+.+++++++||.|.++++|++ ||++..+
T Consensus 74 tp~~~h~~~~~~al~--~gk~vl~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~~~~r~~p~~~~~~~~-----ig~~~~~ 145 (308)
T 3uuw_A 74 SSTETHYEIIKILLN--LGVHVYVDKPLASTVSQGEELIELSTK-KNLNLMVGFNRRFCPMYKEIKNN-----ATEIVSI 145 (308)
T ss_dssp CCGGGHHHHHHHHHH--TTCEEEECSSSSSSHHHHHHHHHHHHH-HTCCEEECCGGGGCHHHHHHHHH-----CCSEEEE
T ss_pred CCcHhHHHHHHHHHH--CCCcEEEcCCCCCCHHHHHHHHHHHHH-cCCEEEEeeccccCHHHHHHHHH-----cCCCcEE
Confidence 999999999999999 999999999999999999999999954 59999999999999999999996 5666666
Q ss_pred EEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEE
Q 017143 162 AIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVE 241 (376)
Q Consensus 162 ~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~ 241 (376)
.+.+++. ..+..|+ ++|.++|+|+|.+|+++||+| +|.+|.+...... ..+.+|.+.++++
T Consensus 146 ~~~~~r~---~~~~~~~-----~~g~l~d~g~H~id~~~~l~G-~~~~v~~~~~~~~----------~~~~~d~~~~~l~ 206 (308)
T 3uuw_A 146 NICKHGL---NSLRNVR-----FDSTLIDDYIHVIDTALWLAN-EDVEISGEDLFLT----------DNKNLIFVSHKLK 206 (308)
T ss_dssp EEEEECS---SCCCSSC-----HHHHHHHTHHHHHHHHHHHHC-SCCEEEEEEEEEC----------TTSCEEEEEEEEE
T ss_pred EEEeccC---CCCCccc-----cCceeeecchHHHHHHHHHcC-CCceEEEeeeeec----------CCCceeEEEEEEE
Confidence 6654432 2234564 257999999999999999999 7888877644321 1256899999999
Q ss_pred ecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHH
Q 017143 242 FENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLN 321 (376)
Q Consensus 242 ~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 321 (376)
|++| ++++..++.. .....+++|+|++|+++++.... +.... .+.........+... .....+..++++
T Consensus 207 ~~~g-~~~~~~s~~~--~~~~~~~~i~G~~G~i~~~~~~~-~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~e~~~ 275 (308)
T 3uuw_A 207 GKNF-SINTSMHRDS--GTKLEQVEILSKGKIQRVKNLNV-LEIEE--GGNLTLKQSGAWVNI-----LKQKGFEDISNH 275 (308)
T ss_dssp CSSC-EEEEEEETTC--SSCEEEEEEEETTEEEEEETTTE-EEEEE--TTEEEEEECCTTCCH-----HHHHTHHHHHHH
T ss_pred eCCE-EEEEEEEcCC--CCCeEEEEEEECCcEEEEecCce-EEEEc--CCcceecccCCccch-----hhccchHHHHHH
Confidence 9997 5777766543 22345899999999999976543 22211 111111111111100 011346689999
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017143 322 FLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIE 356 (376)
Q Consensus 322 f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~ 356 (376)
|+++|+ +++++.++++|+++++++++++++|++
T Consensus 276 F~~~i~--~g~~~~~~~~d~~~~~~i~~ai~~S~k 308 (308)
T 3uuw_A 276 FIDCIE--NNIKPAINGEECIKAQRLLEKIINSVK 308 (308)
T ss_dssp HHHHHH--TTCCCSSCGGGGTHHHHHHHHHHHTCC
T ss_pred HHHHHh--CCCCCCcCHHHHHHHHHHHHHHHHhcC
Confidence 999999 667888999999999999999999964
No 41
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.5e-49 Score=365.56 Aligned_cols=290 Identities=16% Similarity=0.142 Sum_probs=234.2
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHh---------hCCC
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELL---------DSGL 74 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~ 74 (376)
+|+||||||+ |++|..|++++... +.++++|||+++++ ..++++++. ++.|+|+++|+ ++++
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~~~----~~~~~~~~~-~~~~~~~~~ll~~~~~l~~~~~~~ 73 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT---GNCLVSAYDINDSV----GIIDSISPQ-SEFFTEFEFFLDHASNLKRDSATA 73 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT---TCEEEEEECSSCCC----GGGGGTCTT-CEEESSHHHHHHHHHHHTTSTTTS
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC---CCEEEEEEcCCHHH----HHHHhhCCC-CcEECCHHHHHHhhhhhhhccCCC
Confidence 4799999999 78999999999886 68999999999873 234556644 37899999999 3788
Q ss_pred CCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCC
Q 017143 75 CDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGS 154 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~ 154 (376)
+|+|+|+||+..|++++++||+ +|||||||||++.|++|+++|.+++++ +|+.+++++++||.|.++.+|++|++|.
T Consensus 74 vD~V~I~tP~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~~-~g~~~~v~~~~R~~p~~~~~k~~i~~g~ 150 (318)
T 3oa2_A 74 LDYVSICSPNYLHYPHIAAGLR--LGCDVICEKPLVPTPEMLDQLAVIERE-TDKRLYNILQLRHHQAIIALKDKVAREK 150 (318)
T ss_dssp CCEEEECSCGGGHHHHHHHHHH--TTCEEEECSSCCSCHHHHHHHHHHHHH-HTCCEEECCGGGGCHHHHHHHHHHHHS-
T ss_pred CcEEEECCCcHHHHHHHHHHHH--CCCeEEEECCCcCCHHHHHHHHHHHHH-hCCEEEEEEhhhcCHHHHHHHHHHhcCC
Confidence 9999999999999999999999 999999999999999999999999955 5999999999999999999999999999
Q ss_pred CCceEEEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccc
Q 017143 155 IGQVKMVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIID 234 (376)
Q Consensus 155 iG~i~~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d 234 (376)
||+|..+++.+........+.+|+.+...+||+++|+|+|.+|+++|++| +|.+|.+.. +.+|
T Consensus 151 iG~i~~v~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~id~~~~l~G-~~~~v~~~~----------------~~~d 213 (318)
T 3oa2_A 151 SPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFG-KLQRNVVHF----------------TSEY 213 (318)
T ss_dssp CSSCEEEEEEEEECCCHHHHHSGGGCHHHHCCHHHHHHHHHHHHHHHHHC-SEEEEEEEE----------------ECSS
T ss_pred CCceEEEEEEEEecCCCCCCcccccCCCcCCCccccCCcHHHHHHHHHhC-CCceEEEEe----------------cCCc
Confidence 99999999876543322234678888778899999999999999999999 688887752 3568
Q ss_pred cEEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCC
Q 017143 235 NAYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGS 314 (376)
Q Consensus 235 ~~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (376)
.+.++|+|+||.+..+ .++.. . ... + +|+|++|++.....+.. +.. ..+.
T Consensus 214 ~~~~~l~~~~g~~~~~-~s~~~-~-~~~-~-~i~G~~G~~~~~~~d~q--------------e~~-----------~~~g 263 (318)
T 3oa2_A 214 KTAGYLEYEQARVRWF-LSVDA-N-DLP-E-SVKGKKPTYRSITVNGE--------------EME-----------FSEG 263 (318)
T ss_dssp EEEEEEEETTEEEEEE-EECCG-G-GSC-T-TTTTTCSEEEEEEETTE--------------ECC-----------C---
T ss_pred EEEEEEEeCCCeEEEE-EEecC-C-CCC-e-EEEecCcEEEEEeECcc--------------HHH-----------HhcC
Confidence 8999999999987765 34322 2 222 3 99999999875432111 000 0134
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017143 315 SYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIE 356 (376)
Q Consensus 315 ~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~ 356 (376)
+..+..+|+++|+ +++++ +++|++.+++++++++.|..
T Consensus 264 ~~~~~~~~~~~i~--~g~~~--~~~da~~~~~i~~~i~~~~~ 301 (318)
T 3oa2_A 264 FTDLHTTSYEEIL--AGRGY--GIDDARHCVETVNTIRSAVI 301 (318)
T ss_dssp --CHHHHHHHHHH--TTCCC--CHHHHHHHHHHHHHHHHCCC
T ss_pred CchhhHHHHHHHH--cCCCC--CHHHHHHHHHHHHHHhcCCc
Confidence 4457899999998 44444 89999999999999998766
No 42
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=100.00 E-value=2.4e-48 Score=358.21 Aligned_cols=307 Identities=19% Similarity=0.202 Sum_probs=243.7
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
+++++||||||+|.+|..|++.+.+. +++++++|+|++++ ++++++++ + ..|+|++++++++++|+|+|+|
T Consensus 7 ~~~~~~igiIG~G~~g~~~~~~l~~~--~~~~~v~v~d~~~~---~~~~~~~~--~--~~~~~~~~~l~~~~~D~V~i~t 77 (315)
T 3c1a_A 7 NNSPVRLALIGAGRWGKNYIRTIAGL--PGAALVRLASSNPD---NLALVPPG--C--VIESDWRSVVSAPEVEAVIIAT 77 (315)
T ss_dssp --CCEEEEEEECTTTTTTHHHHHHHC--TTEEEEEEEESCHH---HHTTCCTT--C--EEESSTHHHHTCTTCCEEEEES
T ss_pred CCCcceEEEECCcHHHHHHHHHHHhC--CCcEEEEEEeCCHH---HHHHHHhh--C--cccCCHHHHhhCCCCCEEEEeC
Confidence 34579999999999999999999987 79999999999987 45555544 4 4799999999987899999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEE
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVA 162 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~ 162 (376)
|+..|.+++++|++ +||||+||||++.+.+++++|.++++ ++|+.+++++++||.|.++.+|++|+ .||+|..++
T Consensus 78 p~~~h~~~~~~al~--~Gk~v~~eKP~~~~~~~~~~l~~~a~-~~g~~~~~~~~~r~~p~~~~~~~~i~--~lG~i~~v~ 152 (315)
T 3c1a_A 78 PPATHAEITLAAIA--SGKAVLVEKPLTLDLAEAEAVAAAAK-ATGVMVWVEHTQLFNPAWEALKADLT--SIGPILAVR 152 (315)
T ss_dssp CGGGHHHHHHHHHH--TTCEEEEESSSCSCHHHHHHHHHHHH-HHCCCEEEECGGGGCHHHHHHHHTHH--HHCSEEEEE
T ss_pred ChHHHHHHHHHHHH--CCCcEEEcCCCcCCHHHHHHHHHHHH-HcCCEEEEeechhcCHHHHHHHHHHH--HcCCeEEEE
Confidence 99999999999999 89999999999999999999999995 45999999999999999999999999 899999998
Q ss_pred EeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEe
Q 017143 163 IREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEF 242 (376)
Q Consensus 163 ~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~ 242 (376)
+++++ ..+| ...+||.++|+|+|.+|+++||+|.+|.+|++........ ..+++|.+.++++|
T Consensus 153 ~~~~~------~~~~---~~~ggG~l~d~g~H~id~~~~l~G~~~~~v~a~~~~~~~~--------~~~~~d~~~~~l~~ 215 (315)
T 3c1a_A 153 SEAGN------HGPY---RPGGVPMLWDWGAHDVSMVLDLMGRDPDSTSASWAARGEK--------DGGEAGDVTLTLAF 215 (315)
T ss_dssp EEEEE------ECCC---CTTCCCHHHHHHHHHHHHHHHHHSSCCSEEEEEEEEEEEE--------TTEEEEEEEEEEEE
T ss_pred EEEec------CCCc---cccCCcchhhhhchHHHHHHHHhCCCCcEEEEEeEeecCC--------CCCCCceEEEEEEE
Confidence 86411 2345 3347899999999999999999996699999986553211 12678999999999
Q ss_pred cCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccc-eeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHH
Q 017143 243 ENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPES-IVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLN 321 (376)
Q Consensus 243 ~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 321 (376)
||.++++..+ ..+ ....+++|+|++|++.++.... .+.... +.. ...+. .+....+.....+.+..++++
T Consensus 216 -~g~~~~~~~s-~~~--~~~~~~~i~G~~G~i~~~~~~~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 286 (315)
T 3c1a_A 216 -STVEAHIRLC-NTM--DKCRRLAVFGEAGTLVMDDRATDKLTLHP---PQP-DGNWP-VGQGHALTVTDEMPLTRAVRL 286 (315)
T ss_dssp -TTEEEEEEEE-SEE--EEEEEEEEEESSCEEEEETTSSSSSEEEC---CCS-SCCCC-CSCCEECCCCCCCHHHHHHHH
T ss_pred -CCEEEEEEEe-cCC--CCCceEEEEecccEEEEccCCCceEEEEc---CCc-ccccC-CCcccccCCCccchHHHHHHH
Confidence 9999999987 332 2345899999999999876443 222211 100 00000 000000111123456689999
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 017143 322 FLSAIRAKGAKVPAVDLQDGLISVAIGVAA 351 (376)
Q Consensus 322 f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~ 351 (376)
|+++|+ ++.++.++++++++++++++|+
T Consensus 287 f~~~i~--~~~~~~~~~~~~~~~~~i~~a~ 314 (315)
T 3c1a_A 287 FAGAVR--QPEPGPSPLELGLRVVRVLGAC 314 (315)
T ss_dssp HHHHTT--SCCCCSSBHHHHHHHHHHHHHH
T ss_pred HHHHHh--cCCCCCCCHHHHHHHHHHHHhh
Confidence 999998 6677889999999999999997
No 43
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=100.00 E-value=4.4e-48 Score=357.84 Aligned_cols=278 Identities=17% Similarity=0.176 Sum_probs=226.6
Q ss_pred CCCCceeEEEEeCChhhH-HHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhC-CCCCEEE
Q 017143 2 AANDTVKYGIIGMGMMGR-EHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDS-GLCDVVV 79 (376)
Q Consensus 2 ~~~~~~~v~iiG~G~~g~-~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~D~V~ 79 (376)
.+|+++||||||+|.+|. .|++.+... ++++|++|||++++ ++|++ .|+|+++||++ +++|+|+
T Consensus 21 ~~M~~~rvgiiG~G~ig~~~~~~~l~~~--~~~~lvav~d~~~~----------~~g~~--~~~~~~~ll~~~~~vD~V~ 86 (330)
T 4ew6_A 21 QSMSPINLAIVGVGKIVRDQHLPSIAKN--ANFKLVATASRHGT----------VEGVN--SYTTIEAMLDAEPSIDAVS 86 (330)
T ss_dssp CCCCCEEEEEECCSHHHHHTHHHHHHHC--TTEEEEEEECSSCC----------CTTSE--EESSHHHHHHHCTTCCEEE
T ss_pred ccCCCceEEEEecCHHHHHHHHHHHHhC--CCeEEEEEEeCChh----------hcCCC--ccCCHHHHHhCCCCCCEEE
Confidence 456789999999999998 799999998 89999999999875 35765 89999999998 8999999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
|+||+..|++++++||+ +||||+||||++.+++|+++|.++|++ +|+.+++++++||.|.++.+|++|++|.||+|.
T Consensus 87 i~tp~~~H~~~~~~al~--aGkhVl~EKP~a~~~~e~~~l~~~a~~-~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~v~ 163 (330)
T 4ew6_A 87 LCMPPQYRYEAAYKALV--AGKHVFLEKPPGATLSEVADLEALANK-QGASLFASWHSRYAPAVEAAKAFLASTTIKSVH 163 (330)
T ss_dssp ECSCHHHHHHHHHHHHH--TTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECCGGGGSTTHHHHHHHHHSSCEEEEE
T ss_pred EeCCcHHHHHHHHHHHH--cCCcEEEeCCCCCCHHHHHHHHHHHHh-cCCeEEEEehhhccHHHHHHHHHHhcCCceEEE
Confidence 99999999999999999 999999999999999999999999954 599999999999999999999999999999987
Q ss_pred EEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEE
Q 017143 160 MVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
.+.....+ .+.....|+. ..+||.++|+|+|.+|+++|++| +|.+|.+....... ..+.+|.+.+.
T Consensus 164 ~~~~~~~~--~~~~~~~w~~--~~ggG~l~d~g~H~ld~~~~l~g-~~~~v~~~~~~~~~---------~~~~~~~a~l~ 229 (330)
T 4ew6_A 164 VIWKEDVR--HWHPNQDWIW--QAGGLGVFDPGINALSIVTHILP-RPVFITGAVLEFPE---------NRDAPIAADIH 229 (330)
T ss_dssp EEEECBHH--HHSTTCSGGG--STTSCTTHHHHHHHHHHHHHHSS-SCCEEEEEEEEEEE---------SCSSCSEEEEE
T ss_pred EEEccCcc--ccCCCCCceE--cCCCcEEEEchhHHHHHHHHHcC-CCeEEEEEEEecCC---------CCcccEEEEEE
Confidence 65432211 1222345654 35889999999999999999999 78888887544322 12567889999
Q ss_pred EEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHH
Q 017143 240 VEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEH 319 (376)
Q Consensus 240 l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (376)
+++++|..+++..+|..+.. ..++++|+|++|++.++.....+... +. . ......+.|..++
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~-~~~~~~i~Gt~G~i~~~~~~~~l~~~----g~-----------~--~~~~~~~~y~~~~ 291 (330)
T 4ew6_A 230 FRDADGLPVHAEFDWRQTGK-QSWDIVAETAAGQMVLSEGGAKLSID----GR-----------L--TFAEPEQEYPSLY 291 (330)
T ss_dssp EECTTCCEEEEEEESBCCSS-CEEEEEEEESSCCEEEETTTTEEEET----TC-----------C--C--CCCCHHHHHH
T ss_pred EEcCCceEEEEEEEeccCCC-CceEEEEEeCCEEEEEECCccEEEEC----CE-----------E--EecCCCcchHHHH
Confidence 99999999999888765433 55689999999999988655444321 10 0 0111234567899
Q ss_pred HHHHHHHHh
Q 017143 320 LNFLSAIRA 328 (376)
Q Consensus 320 ~~f~~~i~~ 328 (376)
++|+++|++
T Consensus 292 ~~F~~~v~~ 300 (330)
T 4ew6_A 292 RRFAEIIKA 300 (330)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999999995
No 44
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=6.4e-48 Score=356.58 Aligned_cols=306 Identities=14% Similarity=0.141 Sum_probs=239.0
Q ss_pred ceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
++||||||+|.+|.. |++.+.+. ++++++ |||++++ +++++++++|++ ..|.++.++| ++++|+|+|+||+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~--~~~~l~-v~d~~~~---~~~~~a~~~g~~-~~~~~~~~~l-~~~~D~V~i~tp~ 73 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW--PDIELV-LCTRNPK---VLGTLATRYRVS-ATCTDYRDVL-QYGVDAVMIHAAT 73 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS--TTEEEE-EECSCHH---HHHHHHHHTTCC-CCCSSTTGGG-GGCCSEEEECSCG
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC--CCceEE-EEeCCHH---HHHHHHHHcCCC-ccccCHHHHh-hcCCCEEEEECCc
Confidence 589999999999985 99999887 789999 9999988 677888899986 4366666777 5679999999999
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEe
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIR 164 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~ 164 (376)
..|.+++++||+ +||||+||||++.+.+++++|.++++ ++|+.+++++++||.|.++.+|++|++|.||+|..++..
T Consensus 74 ~~h~~~~~~al~--~Gk~V~~EKP~~~~~~~~~~l~~~a~-~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~~v~~~ 150 (323)
T 1xea_A 74 DVHSTLAAFFLH--LGIPTFVDKPLAASAQECENLYELAE-KHHQPLYVGFNRRHIPLYNQHLSELAQQECGALRSLRWE 150 (323)
T ss_dssp GGHHHHHHHHHH--TTCCEEEESCSCSSHHHHHHHHHHHH-HTTCCEEEECGGGCCHHHHHHCHHHHHTSCTTCSEEEEE
T ss_pred hhHHHHHHHHHH--CCCeEEEeCCCcCCHHHHHHHHHHHH-hcCCeEEEeeccccCHHHHHHHHHHhcCCcCCceEEEEE
Confidence 999999999999 89999999999999999999999994 459999999999999999999999999999999998875
Q ss_pred eccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecC
Q 017143 165 EHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFEN 244 (376)
Q Consensus 165 ~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~ 244 (376)
+.+... +..| +|.++|+|+|.+|+++||+|.+|.+|++..... .+|...++++|++
T Consensus 151 ~~~~~~---p~~~-------~g~l~d~g~H~id~~~~l~G~~~~~V~a~~~~~--------------~~d~~~~~~~~~~ 206 (323)
T 1xea_A 151 KHRHAL---PGDI-------RTFVFDDFIHPLDSVNLSRQCNLDDLHLTYHMS--------------EGLLARLDVQWQT 206 (323)
T ss_dssp EECBSC---CBCH-------HHHHHTTTHHHHHHHCTTCCCSCTTEEEEEEEE--------------TTEEEEEEEEEEE
T ss_pred ecCCCC---cccc-------hhhhhhcceeHHHHHHHHhCCCceEEEEEEeec--------------CCceEEEEEEEcC
Confidence 433211 1222 578999999999999999997679999876432 1355677778877
Q ss_pred Cc-EEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHHHHHH
Q 017143 245 GS-RGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEHLNFL 323 (376)
Q Consensus 245 G~-~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 323 (376)
|. .+++.+++ .......+++|+|++|++.++.......+.... ........+.. ......+..++++|+
T Consensus 207 g~~~~~~~~~~--~~~~~~~~~~i~G~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~f~ 276 (323)
T 1xea_A 207 GDTLLHASMNR--QFGITTEHVTASYDNVAYLFDSFTQGKMWRDNQ---ESRVALKDWTP-----MLASKGFDAMVQDWL 276 (323)
T ss_dssp TTEEEEEEEET--TBSSCEEEEEEEETTEEEEESSSSEEEEEETTE---EEEEECCTTCC-----HHHHTTHHHHHHHHH
T ss_pred CCEEEEEEEEe--cCCCceEEEEEEECCcEEEEecCcccceEeecc---CCccccCCcCc-----hhhhccHHHHHHHHH
Confidence 74 66655443 223345589999999999987544321111100 00000011110 011245668999999
Q ss_pred HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 017143 324 SAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKG 358 (376)
Q Consensus 324 ~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g 358 (376)
++|+ ++.++.++++++++++++++|+++|+++|
T Consensus 277 ~~i~--~g~~~~~~~~d~l~~~~i~~a~~~s~~~g 309 (323)
T 1xea_A 277 QVAA--AGKLPTHIIERNLASHQLAEAICQQITQQ 309 (323)
T ss_dssp HHHH--HTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--cCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 9998 55567789999999999999999999988
No 45
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=100.00 E-value=8.3e-47 Score=348.62 Aligned_cols=310 Identities=16% Similarity=0.243 Sum_probs=231.9
Q ss_pred CCCCCceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 1 MAANDTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|+ |+++||||||+|.+|.. |++.+.+. +++++++|||++++ +++++++++|++ .|++++++ ++++|+|+
T Consensus 1 m~-m~~~~vgiiG~G~~g~~~~~~~l~~~--~~~~lvav~d~~~~---~~~~~~~~~g~~--~~~~~~~l--~~~~D~V~ 70 (319)
T 1tlt_A 1 MS-LKKLRIGVVGLGGIAQKAWLPVLAAA--SDWTLQGAWSPTRA---KALPICESWRIP--YADSLSSL--AASCDAVF 70 (319)
T ss_dssp -----CEEEEEECCSTHHHHTHHHHHHSC--SSEEEEEEECSSCT---THHHHHHHHTCC--BCSSHHHH--HTTCSEEE
T ss_pred CC-CCcceEEEECCCHHHHHHHHHHHHhC--CCeEEEEEECCCHH---HHHHHHHHcCCC--ccCcHHHh--hcCCCEEE
Confidence 54 45799999999999996 89988887 89999999999998 566788888976 88999887 35699999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
|+||+..|.+++++||+ +||||+||||++.+.+++++|.+++++ .|+.+++++++||.|.++.+|++| |++.
T Consensus 71 i~tp~~~h~~~~~~al~--~G~~v~~eKP~~~~~~~~~~l~~~a~~-~g~~~~~~~~~r~~p~~~~~k~~i-----~~~~ 142 (319)
T 1tlt_A 71 VHSSTASHFDVVSTLLN--AGVHVCVDKPLAENLRDAERLVELAAR-KKLTLMVGFNRRFAPLYGELKTQL-----ATAA 142 (319)
T ss_dssp ECSCTTHHHHHHHHHHH--TTCEEEEESSSCSSHHHHHHHHHHHHH-TTCCEEEECGGGGCHHHHHHTTTG-----GGCC
T ss_pred EeCCchhHHHHHHHHHH--cCCeEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEeeecccCHHHHHHHHHh-----CCCc
Confidence 99999999999999999 999999999999999999999999954 599999999999999999999986 4454
Q ss_pred EEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEE
Q 017143 160 MVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 239 (376)
.++....+.. .|. ....+|.++|+|+|.+|+++||+|. +.+|++...... +.+|...++
T Consensus 143 ~i~~~~~~~~------~~~--p~~~~g~l~d~g~H~id~~~~l~G~-~~~V~a~~~~~~------------~~~d~~~~~ 201 (319)
T 1tlt_A 143 SLRMDKHRSN------SVG--PHDLYFTLLDDYLHVVDTALWLSGG-KASLDGGTLLTN------------DAGEMLFAE 201 (319)
T ss_dssp EEEEEECCSS------CCC--SSCHHHHHHHTHHHHHHHHHHHTTT-CCCEEEEEEEEC------------TTCCEEEEE
T ss_pred EEEEEecCCC------ccC--CCCCCceeecccccHHHHHHHHcCC-CeEEEEEEEecC------------CCCcEEEEE
Confidence 5544322211 110 1123578999999999999999994 599998754320 234667888
Q ss_pred EEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCHHHH
Q 017143 240 VEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSYLEH 319 (376)
Q Consensus 240 l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (376)
++|++|. +++..++.........+++|+|++|++.++.... +.... .+ ... ...... .. .......+..++
T Consensus 202 ~~~~~g~-~~~~~~~~~~~~~~~~~~~i~G~~G~i~~~~~~~-~~~~~--~~--~~~-~~~~~~-~~-~~~~~~~~~~~~ 272 (319)
T 1tlt_A 202 HHFSAGP-LQITTCMHRRAGSQRETVQAVTDGALIDITDMRE-WREER--GQ--GVV-HKPIPG-WQ-STLEQRGFVGCA 272 (319)
T ss_dssp EEEEETT-EEEEEEEESSSSCCCEEEEEEETTEEEEEETTTE-EEEES--SS--CEE-ECCCCT-TC-CHHHHTTHHHHH
T ss_pred EEEcCCC-EEEEEEEeccCCCCcEEEEEEECCCEEEEecCce-EEEec--CC--cee-cccCCC-Cc-cccccccHHHHH
Confidence 8888886 5555555444333456899999999999875443 22211 11 110 000000 00 000124566789
Q ss_pred HHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCE
Q 017143 320 LNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKGRF 360 (376)
Q Consensus 320 ~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g~~ 360 (376)
++|+++|+ ++.++.++++++++++++++|+++|+++|++
T Consensus 273 ~~F~~~i~--~g~~~~~~~~~~~~~~~i~~a~~~Sa~~g~~ 311 (319)
T 1tlt_A 273 RHFIECVQ--NQTVPQTAGEQAVLAQRIVDKIWRDAMSEEG 311 (319)
T ss_dssp HHHHHHHH--HTCCCTTSGGGGSHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999998 5566789999999999999999999999875
No 46
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=100.00 E-value=3.2e-47 Score=349.17 Aligned_cols=291 Identities=14% Similarity=0.173 Sum_probs=233.6
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHh--------hCCCC
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELL--------DSGLC 75 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ 75 (376)
+|+||||||+ |++|..|+++++.. +.++++|||+++++ + .++++++. ++.|+|+++++ +++++
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~~~~---~-~~~~~~~~-~~~~~~~~~ll~~~~~l~~~~~~v 73 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV---GGVLVASLDPATNV---G-LVDSFFPE-AEFFTEPEAFEAYLEDLRDRGEGV 73 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT---TCEEEEEECSSCCC---G-GGGGTCTT-CEEESCHHHHHHHHHHHHHTTCCC
T ss_pred CceEEEEECCChHHHHHHHHHHHhC---CCEEEEEEcCCHHH---H-HHHhhCCC-CceeCCHHHHHHHhhhhcccCCCC
Confidence 4799999999 68999999999886 68999999999874 2 34555544 37999999999 78899
Q ss_pred CEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 76 DVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
|+|+||||+..|++++++||+ +||||+||||++.+.+|+++|++++++ +|+.+++++++||.|.++++|++|++|
T Consensus 74 D~V~I~tP~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~~-~g~~~~v~~~~R~~p~~~~~k~~i~~g-- 148 (312)
T 3o9z_A 74 DYLSIASPNHLHYPQIRMALR--LGANALSEKPLVLWPEEIARLKELEAR-TGRRVYTVLQLRVHPSLLALKERLGQE-- 148 (312)
T ss_dssp SEEEECSCGGGHHHHHHHHHH--TTCEEEECSSSCSCHHHHHHHHHHHHH-HCCCEEECCGGGGCHHHHHHHHHHHTC--
T ss_pred cEEEECCCchhhHHHHHHHHH--CCCeEEEECCCCCCHHHHHHHHHHHHH-cCCEEEEEeehhcCHHHHHHHHHHHcC--
Confidence 999999999999999999999 999999999999999999999999955 599999999999999999999999999
Q ss_pred CceEEEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCccccc
Q 017143 156 GQVKMVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDN 235 (376)
Q Consensus 156 G~i~~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~ 235 (376)
|+|..+++.+..........+|+.+...+||+++|+|+|.+|+++||+| +|.+|++.. +.+|.
T Consensus 149 G~i~~v~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~id~~~~l~G-~~~~v~~~~----------------~~~d~ 211 (312)
T 3o9z_A 149 KGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIGIHFFDLLAWLFG-RALHVEVHA----------------RTPTV 211 (312)
T ss_dssp CSCEEEEEEEEECCCTTGGGSGGGCHHHHCCHHHHTTHHHHHHHHHHHC-CEEEEEEEE----------------ECSSE
T ss_pred CCEEEEEEEEEccCCCccccccccCcccCCCeeeecccCHHHHHHHHhC-CCeEEEEEe----------------cCCce
Confidence 9999999876443222234678888778899999999999999999999 799998752 35688
Q ss_pred EEEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCC
Q 017143 236 AYVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSS 315 (376)
Q Consensus 236 ~~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (376)
+.++|+|+||.+..+ .+.. .....+++|+|++|++.....+. ++..+. ..+
T Consensus 212 ~~~~l~~~~g~v~~~-~s~~---~~~~~~~~v~G~~G~~~~~~~d~--------------qe~~l~-----------~g~ 262 (312)
T 3o9z_A 212 NAGYLELEGARVRWF-LSID---PSFVPEPLRRQGKRTYRSIAVDG--------------EEVEFS-----------EGF 262 (312)
T ss_dssp EEEEEEETTEEEEEE-EESC---GGGSCHHHHTTTCCEEEEEEETT--------------EEEECC-----------TTT
T ss_pred EEEEEEECCCcEEEE-EEec---CCCCCeEEEEecCcEEEEEeecc--------------cHHHHh-----------cCC
Confidence 999999999987654 3322 22333689999999997542211 111111 111
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 017143 316 YLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKG 358 (376)
Q Consensus 316 ~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g 358 (376)
......++..++ .+. ..+++++..+++++++++.|..++
T Consensus 263 ~~~h~~~~~~i~--~g~--~~g~~~~~~~~~~~~~ir~~~~~~ 301 (312)
T 3o9z_A 263 TDLHTEVYRKTL--AGE--GFGLDEAAEAIRVAALLRTLPLSQ 301 (312)
T ss_dssp TSCHHHHHHHHH--TTC--CEEHHHHHHHHHHHHHHTTCCCCC
T ss_pred hhhhHHHHHHHH--cCC--CCChHHhHHHHHHHHHHhcCCCcC
Confidence 123458888887 433 349999999999999999775544
No 47
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=100.00 E-value=4.5e-41 Score=305.93 Aligned_cols=286 Identities=14% Similarity=0.108 Sum_probs=216.0
Q ss_pred CC-CCCceeEEEEeCChhhHHHHHHhhhhc-CCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEE
Q 017143 1 MA-ANDTVKYGIIGMGMMGREHFINLHHLR-SQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVV 78 (376)
Q Consensus 1 m~-~~~~~~v~iiG~G~~g~~~~~~~~~~~-~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V 78 (376)
|+ +++++||||||+|.+|..|+..+.... .+++++++|+|++.. ++++|++ |.|+++|++++++|+|
T Consensus 1 M~~~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~--------a~~~g~~---~~~~~ell~~~~vD~V 69 (294)
T 1lc0_A 1 MITNSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL--------GSLDEVR---QISLEDALRSQEIDVA 69 (294)
T ss_dssp CCCCCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC--------CEETTEE---BCCHHHHHHCSSEEEE
T ss_pred CCCCCCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH--------HHHcCCC---CCCHHHHhcCCCCCEE
Confidence 63 556899999999999999999987621 178999999998642 3456754 5899999999889999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC--C
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI--G 156 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i--G 156 (376)
+|+||+..|++++++||+ +||||+||||++.+.+|+++|.+++++ +|+.+++++++||.|.++.+|+++.+|.| |
T Consensus 70 ~i~tp~~~H~~~~~~al~--aGkhVl~EKPla~~~~ea~~l~~~a~~-~g~~~~~~~~~r~~p~~~~~~~~i~~g~i~~g 146 (294)
T 1lc0_A 70 YICSESSSHEDYIRQFLQ--AGKHVLVEYPMTLSFAAAQELWELAAQ-KGRVLHEEHVELLMEEFEFLRREVLGKELLKG 146 (294)
T ss_dssp EECSCGGGHHHHHHHHHH--TTCEEEEESCSCSCHHHHHHHHHHHHH-TTCCEEEECGGGGSHHHHHHHHHHTTCCEEEE
T ss_pred EEeCCcHhHHHHHHHHHH--CCCcEEEeCCCCCCHHHHHHHHHHHHH-hCCEEEEEEhHhccHHHHHHHHHHhcCCeeEE
Confidence 999999999999999999 999999999999999999999999955 59999999999999999999999998877 4
Q ss_pred ceEEEEEeeccCCcccccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccE
Q 017143 157 QVKMVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNA 236 (376)
Q Consensus 157 ~i~~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~ 236 (376)
++... .... .+.|+.+. ...|+|.++++++||| +|..|.+...... ....|..
T Consensus 147 ~~~~~-----~~~~---~~~~~~~~-------~~~Gi~~l~~~~~l~G-~~~~v~a~~~~~~-----------~~~~~~~ 199 (294)
T 1lc0_A 147 SLRFT-----ASPL---EEERFGFP-------AFSGISRLTWLVSLFG-ELSLISATLEERK-----------EDQYMKM 199 (294)
T ss_dssp EEEEE-----ESCC---CHHHHCCH-------HHHTHHHHHHHHHHHC-SCEEEEEEEEEEG-----------GGTEEEE
T ss_pred EEEEe-----cCCC---ChhhccCh-------hhcCccHHHHHHHhcC-CceEEEEEEeecC-----------ccccccE
Confidence 33221 1111 12222111 1247999999999999 6888888654211 1345788
Q ss_pred EEEEEecCCcEEEEEEEEeecCCCCceEEEEEecCCeeeeecccceeeeecccCCccceEEeeccCccccccCCCCCCCH
Q 017143 237 YVIVEFENGSRGMLDLCMFAEGSKNEQEIVVVGNTGKGEAFVPESIVRFATREAGREDVQTLKAEDDRIEYEGLHHGSSY 316 (376)
Q Consensus 237 ~~~l~~~~G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (376)
.+.+++.+|..+++..+.. .......++++.+++|.+.... . .+ ..+.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~------~----------------------~~-~~~~~~ 249 (294)
T 1lc0_A 200 TVQLETQNKGLLSWIEEKG-PGLKRNRYVNFQFTSGSLEEVP------S----------------------VG-VNKNIF 249 (294)
T ss_dssp EEEEECTTSCEEEEEEEEC-TTCCCEEEEEEEESSCEECCCC------C----------------------CS-CCTTHH
T ss_pred EEEEECCCCceEEEEeccc-cccCCCcEEEEEecCCeeEEcC------C----------------------CC-CcCcee
Confidence 9999999999887653322 2233455899999998764210 0 01 123444
Q ss_pred HH-HHHHHHHHHhcCCCCCC-CCHHH--HHHHHHHHHHHHHHHHcCC
Q 017143 317 LE-HLNFLSAIRAKGAKVPA-VDLQD--GLISVAIGVAAQLSIEKGR 359 (376)
Q Consensus 317 ~~-l~~f~~~i~~~~~~~~~-~~~~d--~~~~~~ii~a~~~S~~~g~ 359 (376)
.+ +++|+++|+ ++++++ ++.++ +++++++++|+++|+++++
T Consensus 250 ~~~~~~F~~~i~--~~~~~~~~~~~~~~~~~~l~~~~ai~~s~~~~~ 294 (294)
T 1lc0_A 250 LKDQDIFVQKLL--DQVSAEDLAAEKKRIMHCLGLASDIQKLCHQKK 294 (294)
T ss_dssp HHHHHHHHHHHT--TCSCHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred hHhHHHHHHHHc--cCCCchhcChHHhhhhHHHHHHHHHHHHhhcCC
Confidence 45 799999998 555433 57777 9999999999999998753
No 48
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=100.00 E-value=4.1e-31 Score=246.24 Aligned_cols=151 Identities=15% Similarity=0.204 Sum_probs=127.1
Q ss_pred CCC-CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 1 MAA-NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 1 m~~-~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|++ .+++||||||+| +|+.|++++.++. ++++|+||||++++ ++++++++||++ .|+|+++|+++ +|+|+
T Consensus 1 M~~~~~~~rv~VvG~G-~g~~h~~a~~~~~-~~~elvav~~~~~~---~a~~~a~~~gv~--~~~~~~~l~~~--~D~v~ 71 (372)
T 4gmf_A 1 MPSASPKQRVLIVGAK-FGEMYLNAFMQPP-EGLELVGLLAQGSA---RSRELAHAFGIP--LYTSPEQITGM--PDIAC 71 (372)
T ss_dssp ------CEEEEEECST-TTHHHHHTTSSCC-TTEEEEEEECCSSH---HHHHHHHHTTCC--EESSGGGCCSC--CSEEE
T ss_pred CCCCCCCCEEEEEehH-HHHHHHHHHHhCC-CCeEEEEEECCCHH---HHHHHHHHhCCC--EECCHHHHhcC--CCEEE
Confidence 644 468999999999 6999999998872 47999999999998 788999999987 89999999975 99999
Q ss_pred EeCCCCcc----HHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHH---HHc
Q 017143 80 VSTPNMTH----YQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQI---VKS 152 (376)
Q Consensus 80 i~t~~~~h----~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~---i~~ 152 (376)
|+||+..| ++++++||+ +|||||||||+ +.+|+++|+++|+ ++|+.++||+++||.|.++++.+. +..
T Consensus 72 i~~p~~~h~~~~~~~a~~al~--aGkhVl~EKPl--~~~ea~~l~~~A~-~~g~~~~v~~~yr~~p~vr~~i~~~~~l~~ 146 (372)
T 4gmf_A 72 IVVRSTVAGGAGTQLARHFLA--RGVHVIQEHPL--HPDDISSLQTLAQ-EQGCCYWINTFYPHTRAGRTWLRDAQQLRR 146 (372)
T ss_dssp ECCC--CTTSHHHHHHHHHHH--TTCEEEEESCC--CHHHHHHHHHHHH-HHTCCEEEECSGGGSHHHHHHHHHHHHHHH
T ss_pred EECCCcccchhHHHHHHHHHH--cCCcEEEecCC--CHHHHHHHHHHHH-HcCCEEEEcCcccCCHHHHHHHHHHHHHHh
Confidence 99999998 999999999 99999999997 7899999999995 559999999999999998776443 445
Q ss_pred CCCCceEEEEEee
Q 017143 153 GSIGQVKMVAIRE 165 (376)
Q Consensus 153 g~iG~i~~~~~~~ 165 (376)
+..+++.++++.+
T Consensus 147 ~~~~~~~~i~~~~ 159 (372)
T 4gmf_A 147 CLAKTPPVVHATT 159 (372)
T ss_dssp HHTSCCSEEEEEE
T ss_pred hccCCceEEEEEe
Confidence 5567888887743
No 49
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=99.96 E-value=7.2e-31 Score=239.37 Aligned_cols=229 Identities=14% Similarity=0.070 Sum_probs=155.8
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
|+.|+++||||||+|.+|+.|++.+.+. ++++|++|||+++++ +++ +|++ |.+++++++.+++|+|+|
T Consensus 4 M~~M~~irv~IIG~G~iG~~~~~~l~~~--~~~elvav~d~~~~~---~~~----~g~~---~~~~~~l~~~~~~DvVii 71 (304)
T 3bio_A 4 MTDDKKIRAAIVGYGNIGRYALQALREA--PDFEIAGIVRRNPAE---VPF----ELQP---FRVVSDIEQLESVDVALV 71 (304)
T ss_dssp ----CCEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC--------------CCTT---SCEESSGGGSSSCCEEEE
T ss_pred CccCCCCEEEEECChHHHHHHHHHHhcC--CCCEEEEEEcCCHHH---HHH----cCCC---cCCHHHHHhCCCCCEEEE
Confidence 6666789999999999999999999887 899999999999873 332 6754 455666666567999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCC-CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPL-CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVK 159 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~-a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~ 159 (376)
|||+..|.+++.+|++ +||||+||||+ +.+.+++++|.+++++ .|+.+++++ ||.|.+..++++|++|.+|++.
T Consensus 72 atp~~~h~~~~~~al~--aG~~Vi~ekP~~a~~~~~~~~l~~~a~~-~g~~~~v~~--~~~p~~~~~~~~i~~g~lG~~~ 146 (304)
T 3bio_A 72 CSPSREVERTALEILK--KGICTADSFDIHDGILALRRSLGDAAGK-SGAAAVIAS--GWDPGSDSVVRTLMQAIVPKGI 146 (304)
T ss_dssp CSCHHHHHHHHHHHHT--TTCEEEECCCCGGGHHHHHHHHHHHHHH-HTCEEECSC--BBTTBHHHHHHHHHHHHSCEEE
T ss_pred CCCchhhHHHHHHHHH--cCCeEEECCCCCCCCHHHHHHHHHHHHh-CCCEEEEeC--CCCHHHHHHHHHHHCCCCCCcE
Confidence 9999999999999999 89999999997 8999999999999954 588999997 9999999999999999999998
Q ss_pred EEEEeeccCCcccccCccccccccCCcccc------cccccHHHHHHHHh---CCCCeEEEEecccccccCccccCCCCC
Q 017143 160 MVAIREHRFPFLVKVNDWNRFNENTGGTLV------EKCCHFFDLMRLFV---GSNPMRVMASGAVDVNHKDEMYNGKVP 230 (376)
Q Consensus 160 ~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~------d~g~H~ld~~~~l~---G~~~~~V~a~~~~~~~~~~~~~~~~~~ 230 (376)
.+.. +......+....|+... +.+.+. +.++|..+ +++. |.++.+|++.....+ .... ......
T Consensus 147 ~~~~-~~~~~~~~~~~~~r~~~--g~~~~~~~~~p~~~~~h~~~--~~~~~~~~~~~~~v~~~i~~~p-~~~~-~~~~~~ 219 (304)
T 3bio_A 147 TYTN-FGPGMSMGHTVAVKAID--GVKAALSMTIPLGTGVHRRM--VYVELLPGHNLEEVSAAIKADE-YFVH-DETHVI 219 (304)
T ss_dssp EEEE-ECSEECHHHHHHHHTST--TEEEEEEEEEECSTTCEEEE--EEEEECTTCCHHHHHHHHHHST-TTTT-SEEEEE
T ss_pred EEEE-eCCCcchhhHHHHHhCc--CchheEEecCCCCCCcceee--EEEEEcCCCCHHHHHHHHhcCC-ccCC-ceeEEE
Confidence 6653 22222222223454321 111122 23336522 2222 112333433332111 0000 001123
Q ss_pred cccccEEEEEEecCCcEEEEEEEE
Q 017143 231 DIIDNAYVIVEFENGSRGMLDLCM 254 (376)
Q Consensus 231 ~~~d~~~~~l~~~~G~~~~l~~~~ 254 (376)
++||... .++|++|..+++..+.
T Consensus 220 ~~ed~~~-~~~~~~G~~~~~~~s~ 242 (304)
T 3bio_A 220 QVDEVDA-LIDMGHGVRMVRKGVS 242 (304)
T ss_dssp ECSCGGG-GCCCEEEEEEEEEEEE
T ss_pred EEeeeee-eeccCCceEEEEEecc
Confidence 5678888 9999999998877654
No 50
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=99.88 E-value=5.5e-23 Score=193.96 Aligned_cols=149 Identities=18% Similarity=0.228 Sum_probs=128.5
Q ss_pred CCCCceeEEEEeCChhhHHHHHHhhhh-------cCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCC
Q 017143 2 AANDTVKYGIIGMGMMGREHFINLHHL-------RSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGL 74 (376)
Q Consensus 2 ~~~~~~~v~iiG~G~~g~~~~~~~~~~-------~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 74 (376)
+||+++||||||+|.+|+.++..+.++ ..++++|++|+|+++++ ++.+.. + ...|+|+++++++++
T Consensus 6 ~MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~---~~~~~~--~--~~~~~d~~ell~d~d 78 (444)
T 3mtj_A 6 QGMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDK---AEALAG--G--LPLTTNPFDVVDDPE 78 (444)
T ss_dssp CSCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHH---HHHHHT--T--CCEESCTHHHHTCTT
T ss_pred hhhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHH---hhhhcc--c--CcccCCHHHHhcCCC
Confidence 356789999999999999888766532 13789999999999873 444432 3 258999999999999
Q ss_pred CCEEEEeCCC-CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEE-EEeeccccCHHHHHHHHHHHc
Q 017143 75 CDVVVVSTPN-MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILV-QVGLEYRYMPPVAKLIQIVKS 152 (376)
Q Consensus 75 ~D~V~i~t~~-~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~-~v~~~~r~~p~~~~~k~~i~~ 152 (376)
+|+|+++||+ ..|++++++||+ +||||+|||| +.+.+++++|.++|++ +|+.+ +.+...++.|.++.+|+++.+
T Consensus 79 iDvVve~tp~~~~h~~~~~~AL~--aGKhVvtenk-al~a~~~~eL~~~A~~-~gv~l~~Ea~V~~giPii~~LrelL~~ 154 (444)
T 3mtj_A 79 IDIVVELIGGLEPARELVMQAIA--NGKHVVTANK-HLVAKYGNEIFAAAQA-KGVMVTFEAAVAGGIPIIKALREGLTA 154 (444)
T ss_dssp CCEEEECCCSSTTHHHHHHHHHH--TTCEEEECCH-HHHHHHHHHHHHHHHH-HTCCEECGGGSSTTSCHHHHHHTTTTT
T ss_pred CCEEEEcCCCchHHHHHHHHHHH--cCCEEEECCc-ccCHHHHHHHHHHHHH-hCCeEEEEEeeeCChHHHHHHHHHHhC
Confidence 9999999996 899999999999 9999999999 7899999999999955 48877 568889999999999999999
Q ss_pred CCCCceEEE
Q 017143 153 GSIGQVKMV 161 (376)
Q Consensus 153 g~iG~i~~~ 161 (376)
|+||+|..+
T Consensus 155 ~~Ig~I~GI 163 (444)
T 3mtj_A 155 NRIEWLAGI 163 (444)
T ss_dssp SCEEEEEEE
T ss_pred CCCceEEEE
Confidence 999999887
No 51
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=99.83 E-value=1.2e-20 Score=177.37 Aligned_cols=139 Identities=19% Similarity=0.264 Sum_probs=113.5
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc-CC--------------------CCCc
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF-DW--------------------PLKV 62 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~-~~--------------------~~~~ 62 (376)
++++||||||+|.+|+.|+..+.+. ++++|++|||++++ +++++++++ |. .+..
T Consensus 21 ~k~IRVGIIGaG~iG~~~~~~l~~~--~~veLvAV~D~~~e---ra~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v 95 (446)
T 3upl_A 21 GKPIRIGLIGAGEMGTDIVTQVARM--QGIEVGALSARRLP---NTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAV 95 (446)
T ss_dssp TCCEEEEEECCSHHHHHHHHHHTTS--SSEEEEEEECSSTH---HHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEE
T ss_pred CCceEEEEECChHHHHHHHHHHhhC--CCcEEEEEEeCCHH---HHHHHHHHhcCCccccccccchhhhhhhhccCCceE
Confidence 4689999999999999999999887 89999999999998 455555553 40 1257
Q ss_pred cCCHHHHhhCCCCCEEEEeCCC-CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCH
Q 017143 63 FPGHQELLDSGLCDVVVVSTPN-MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMP 141 (376)
Q Consensus 63 ~~~~~~~l~~~~~D~V~i~t~~-~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p 141 (376)
|+|++++|+++++|+|+++||+ ..|++++++||+ +||||+|+++ ..+..++.+|.++|++ +|+.++++..-+...
T Consensus 96 ~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~--AGKHVv~~nk-~l~~~eg~eL~~~A~e-~Gvvl~~~~gdqp~~ 171 (446)
T 3upl_A 96 TDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIR--NGKHLVMMNV-EADVTIGPYLKAQADK-QGVIYSLGAGDEPSS 171 (446)
T ss_dssp ESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHH--TTCEEEECCH-HHHHHHHHHHHHHHHH-HTCCEEECTTSHHHH
T ss_pred ECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHH--cCCcEEecCc-ccCHHHHHHHHHHHHH-hCCeeeecCCcchHH
Confidence 8999999999999999999987 479999999999 9999999665 4688999999999954 599999988666444
Q ss_pred HHHHHHHHHHc
Q 017143 142 PVAKLIQIVKS 152 (376)
Q Consensus 142 ~~~~~k~~i~~ 152 (376)
...+-++.+.
T Consensus 172 -~~eLv~~a~~ 181 (446)
T 3upl_A 172 -CMELIEFVSA 181 (446)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHh
Confidence 3344444443
No 52
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=99.83 E-value=7.8e-21 Score=173.41 Aligned_cols=150 Identities=18% Similarity=0.179 Sum_probs=120.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhc------CCCcEEEEEeCCChhhHH---HHHHHHHhcCCCCCccC--CHHHHhhCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLR------SQGVSVVCIADPHLQSRQ---QALKLANAFDWPLKVFP--GHQELLDSGL 74 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~------~~~~~~~~v~d~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~l~~~~ 74 (376)
|+||||||+|.+|+.|+..+.+.. .++++|++|||+++.... ..+.++.+++.. ..|+ |+++++++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~-~~~~~~d~~~ll~~~~ 80 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETG-MLRDDAKAIEVVRSAD 80 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHS-SCSBCCCHHHHHHHSC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCc-cccCCCCHHHHhcCCC
Confidence 699999999999999999887652 168999999999865321 122233333222 4666 9999999999
Q ss_pred CCEEEEeCCCCcc----HHHHHHHHcCCCCCeEEEe--cCCCCCHHHHHHHHHHHHhCCCeEE-EEeeccccCHHHHHHH
Q 017143 75 CDVVVVSTPNMTH----YQILMDIINHPKPHHVLVE--KPLCTTVADCKKVVDAARKRPDILV-QVGLEYRYMPPVAKLI 147 (376)
Q Consensus 75 ~D~V~i~t~~~~h----~~~~~~al~~~~g~~Vl~E--KP~a~~~~e~~~l~~~a~~~~~~~~-~v~~~~r~~p~~~~~k 147 (376)
+|+|++|||+..| ++++++||+ +||||+|| ||++ .+.++|.++|++ +|+.+ +.+...++.|.++.+|
T Consensus 81 iDvVv~~tp~~~h~~~a~~~~~~aL~--aGkhVv~~NKkpla---~~~~eL~~~A~~-~g~~~~~ea~v~~g~Pii~~l~ 154 (327)
T 3do5_A 81 YDVLIEASVTRVDGGEGVNYIREALK--RGKHVVTSNKGPLV---AEFHGLMSLAER-NGVRLMYEATVGGAMPVVKLAK 154 (327)
T ss_dssp CSEEEECCCCC----CHHHHHHHHHT--TTCEEEECCSHHHH---HHHHHHHHHHHH-TTCCEECGGGSSTTSCCHHHHH
T ss_pred CCEEEECCCCcccchhHHHHHHHHHH--CCCeEEecCchhhH---HHHHHHHHHHHh-hCCcEEEEEEeeecCHHHHHHH
Confidence 9999999999999 999999999 99999999 9997 478899999955 47754 5688889999999999
Q ss_pred HHHHcCCCCceEEEE
Q 017143 148 QIVKSGSIGQVKMVA 162 (376)
Q Consensus 148 ~~i~~g~iG~i~~~~ 162 (376)
+++..++||+|..+-
T Consensus 155 ~~l~~~~I~~I~GIl 169 (327)
T 3do5_A 155 RYLALCEIESVKGIF 169 (327)
T ss_dssp TTTTTSCEEEEEEEC
T ss_pred HHhhCCCccEEEEEE
Confidence 999888888887764
No 53
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=99.81 E-value=1.9e-20 Score=171.67 Aligned_cols=131 Identities=11% Similarity=0.044 Sum_probs=114.1
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
|+++||+|||+|.+|+.|+..+.+. +++++++++|+++++ +++ +|+ ..|+|+++++ .++|+|+++||
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~--~~~elvav~d~~~~~-----~~~--~gv--~~~~d~~~ll--~~~DvViiatp 67 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQ--PDMDLVGIFSRRATL-----DTK--TPV--FDVADVDKHA--DDVDVLFLCMG 67 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEEESSSCC-----SSS--SCE--EEGGGGGGTT--TTCSEEEECSC
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcC--CCCEEEEEEcCCHHH-----hhc--CCC--ceeCCHHHHh--cCCCEEEEcCC
Confidence 3579999999999999999999887 799999999998763 222 564 4789999988 45999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHH-HHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHc
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADC-KKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKS 152 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~-~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 152 (376)
+..|.+.+.++++ +|+||+||||++.+.+++ ++|.++++ +++ .+.+.++ ||.|.+..+++++.+
T Consensus 68 ~~~h~~~~~~al~--aG~~Vv~ekp~~~~~~~~~~~l~~~a~-~~~-~v~v~~~-~~~p~~~~l~~~l~~ 132 (320)
T 1f06_A 68 SATDIPEQAPKFA--QFACTVDTYDNHRDIPRHRQVMNEAAT-AAG-NVALVST-GWDPGMFSINRVYAA 132 (320)
T ss_dssp TTTHHHHHHHHHT--TTSEEECCCCCGGGHHHHHHHHHHHHH-HHT-CEEECSC-SBTTBHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH--CCCEEEECCCCcCCHHHHHHHHHHHHH-hCC-CEEEEec-CChHHHHHHHHHHhh
Confidence 9999999999999 899999999999999999 99999994 434 5666777 999999999999986
No 54
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=99.80 E-value=5.8e-20 Score=168.62 Aligned_cols=150 Identities=16% Similarity=0.152 Sum_probs=117.9
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhc-----CCCcEEEEEeCCChhhHHH---HHHHHHh---cCCCCCccC---CHHHH
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLR-----SQGVSVVCIADPHLQSRQQ---ALKLANA---FDWPLKVFP---GHQEL 69 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~-----~~~~~~~~v~d~~~~~~~~---~~~~~~~---~~~~~~~~~---~~~~~ 69 (376)
|+++||||||+|.+|+.|+..+.+.+ +.+++|++|+|+++++... ..++++. .+++ ..|+ |++++
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l 82 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLD-SLEYESISASEA 82 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGG-GCCSEECCHHHH
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcc-cccCCCCCHHHH
Confidence 56799999999999999999987762 1169999999998764322 1122222 2332 3566 99999
Q ss_pred hhCCCCCEEEEeCCCC----ccHHHHHHHHcCCCCCeEEE--ecCCCCCHHHHHHHHHHHHhCCCeEE-EEeeccccCHH
Q 017143 70 LDSGLCDVVVVSTPNM----THYQILMDIINHPKPHHVLV--EKPLCTTVADCKKVVDAARKRPDILV-QVGLEYRYMPP 142 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~----~h~~~~~~al~~~~g~~Vl~--EKP~a~~~~e~~~l~~~a~~~~~~~~-~v~~~~r~~p~ 142 (376)
+ ++++|+|++|||+. .|++++++||+ +||||+| +||+ ..++++|.++|+++ |+.+ +.+....+.|.
T Consensus 83 l-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~--aGkhVvtanK~pl---a~~~~eL~~~A~~~-gv~~~~ea~vg~giPi 155 (331)
T 3c8m_A 83 L-ARDFDIVVDATPASADGKKELAFYKETFE--NGKDVVTANKSGL---ANFWPEIMEYARSN-NRRIRYEATVAGGVPL 155 (331)
T ss_dssp H-HSSCSEEEECSCCCSSSHHHHHHHHHHHH--TTCEEEECCCHHH---HHHHHHHHHHHHHH-TCCEECGGGSSTTSCC
T ss_pred h-CCCCCEEEECCCCCCccchHHHHHHHHHH--CCCeEEecCchhh---HHHHHHHHHHHHHc-CCEEEEEeecccccHH
Confidence 9 88999999999997 89999999999 9999999 4576 57899999999554 7544 44445666799
Q ss_pred HHHHHHHHHcCCCCceEEE
Q 017143 143 VAKLIQIVKSGSIGQVKMV 161 (376)
Q Consensus 143 ~~~~k~~i~~g~iG~i~~~ 161 (376)
++.+|+++..++|++|..+
T Consensus 156 i~~l~~~l~g~~I~~I~GI 174 (331)
T 3c8m_A 156 FSFIDYSVLPSRIKKFRGI 174 (331)
T ss_dssp HHHHHHHSTTCCCCEEEEE
T ss_pred HHHHHHHhhcCcccEEEEE
Confidence 9999999998889888775
No 55
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=99.77 E-value=3e-19 Score=165.11 Aligned_cols=146 Identities=14% Similarity=0.221 Sum_probs=117.5
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhc-CCCcEEEEEeCCChhhHHHHHHHHHhc-CCCCCccCCHHHHhhCC-----CC-
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLR-SQGVSVVCIADPHLQSRQQALKLANAF-DWPLKVFPGHQELLDSG-----LC- 75 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~-~~~~~~~~v~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~-----~~- 75 (376)
.+++||||||+|.+|+.|+..+.+.+ ..+++|++|+|++.. .++++| |++ .|++++++++++ ++
T Consensus 2 ~k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~------~~~~~~~gi~--~~~~~~e~l~~~~~~~~did 73 (358)
T 1ebf_A 2 TKVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERS------LISKDFSPLN--VGSDWKAALAASTTKTLPLD 73 (358)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBE------EECSSCSCCS--CTTCHHHHHHTCCCBCCCHH
T ss_pred CceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChh------hhccccCCCC--ccccHHHHHhcccCCCCCHH
Confidence 46799999999999999999998862 227999999996543 234456 765 678999999875 45
Q ss_pred ------------CEEEEeCCCCccHHHHHHHHcCCCCCeEEE--ecCCCCCHHHHHHHHHHHHhCCCeEEE-EeeccccC
Q 017143 76 ------------DVVVVSTPNMTHYQILMDIINHPKPHHVLV--EKPLCTTVADCKKVVDAARKRPDILVQ-VGLEYRYM 140 (376)
Q Consensus 76 ------------D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~--EKP~a~~~~e~~~l~~~a~~~~~~~~~-v~~~~r~~ 140 (376)
|+|++|||+..|.....+||+ +||||+| |||++.+.+++++|. +| +++|+.+. .+....+.
T Consensus 74 ~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~--aGkhVVtaNkkpla~~~~~~~eL~-~A-~~~gv~~~~Ea~vg~gi 149 (358)
T 1ebf_A 74 DLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVE--NGISIATPNKKAFSSDLATWKALF-SN-KPTNGFVYHEATVGAGL 149 (358)
T ss_dssp HHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHH--TTCEEECCCCGGGSSCHHHHHHHT-CC-CTTCCCEECGGGTTTTS
T ss_pred HHHHHhhhccCCcEEEEcCCChHHHHHHHHHHH--CCCeEEecCcccccCCHHHHHHHH-HH-HHcCCEEEEccccccCC
Confidence 799999999999999999999 9999999 999999999999999 99 55676653 33345556
Q ss_pred HHHHHHHHHHHc-CCCCceEEE
Q 017143 141 PPVAKLIQIVKS-GSIGQVKMV 161 (376)
Q Consensus 141 p~~~~~k~~i~~-g~iG~i~~~ 161 (376)
|.++.+|+++++ ++|++|..+
T Consensus 150 Pii~~l~~~l~~G~~I~~I~GI 171 (358)
T 1ebf_A 150 PIISFLREIIQTGDEVEKIEGI 171 (358)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEE
T ss_pred cHHHHHHHHHHcCCCeEEEEEE
Confidence 999999999965 455655554
No 56
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=99.75 E-value=5.5e-18 Score=152.80 Aligned_cols=206 Identities=15% Similarity=0.138 Sum_probs=164.6
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEE-eCCChhhHHHHHHHHHhcCCCCCcc-----CCH------------
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCI-ADPHLQSRQQALKLANAFDWPLKVF-----PGH------------ 66 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v-~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~------------ 66 (376)
+.||+|+| +|.||..|+..++++ +.++|+++ ++++.+ ++.+.+++|+.+ .+ +++
T Consensus 3 ~k~i~ILGsTGSIG~~tldVi~~~--~~~~vvaL~a~~n~~---~l~~q~~~f~p~--~v~v~~~~~~~~~l~~~~~G~~ 75 (376)
T 3a06_A 3 ERTLVILGATGSIGTQTLDVLKKV--KGIRLIGISFHSNLE---LAFKIVKEFNVK--NVAITGDVEFEDSSINVWKGSH 75 (376)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHS--CSEEEEEEEESSCHH---HHHHHHHHHTCC--EEEECSSCCCCCSSSEEEESTT
T ss_pred cceEEEECCCCHHHHHHHHHHHhC--CCeEEEEEEccCCHH---HHHHHHHHcCCC--EEEEccHHHHHHHHHHHccCHH
Confidence 37999999 699999999999987 78999999 777777 677778888854 33 344
Q ss_pred --HHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEE-ecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHH
Q 017143 67 --QELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLV-EKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPV 143 (376)
Q Consensus 67 --~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~-EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~ 143 (376)
.+++..+++|+|+++++...|...+++|++ +||+|++ +| ...+.....+.+++ +++|+.+....+ ++++.+
T Consensus 76 ~l~el~~~~~~D~Vv~AivG~aGL~ptlaAi~--aGK~vaLANK--EsLV~aG~li~~~a-~~~g~~llPVDS-EHsAif 149 (376)
T 3a06_A 76 SIEEMLEALKPDITMVAVSGFSGLRAVLASLE--HSKRVCLANK--ESLVCGGFLVKKKL-KEKGTELIPVDS-EHSAIF 149 (376)
T ss_dssp HHHHHHHHHCCSEEEECCCSTTHHHHHHHHHH--HCSEEEECCS--HHHHHHHHHHHHHH-HHHCCEEEECSH-HHHHHH
T ss_pred HHHHHhcCCCCCEEEEEeeCHHHHHHHHHHHH--CCCEEEEeCh--HHHHhhHHHHHHHH-HHcCCEEEEEcc-ccCHHH
Confidence 588887789999999999999999999999 8999999 99 66788888889999 445889988887 999999
Q ss_pred HHHHHHHHcCCCCceEEEEEeeccCCccc------------c---cCcccccccc--CCcccccccccHHHHHHHHhCCC
Q 017143 144 AKLIQIVKSGSIGQVKMVAIREHRFPFLV------------K---VNDWNRFNEN--TGGTLVEKCCHFFDLMRLFVGSN 206 (376)
Q Consensus 144 ~~~k~~i~~g~iG~i~~~~~~~~~~~~~~------------~---~~~w~~~~~~--~gG~l~d~g~H~ld~~~~l~G~~ 206 (376)
+.++ +.+++|...-+ .+|+.. + -++|..-.+- -+..|++.|.|.++ +.||||-+
T Consensus 150 Q~L~-----~~v~kiiLTAS---GGpFr~~~~~~l~~vt~~~Al~HPnW~MG~KITiDSATmmNKGlEvIE-A~wLF~~~ 220 (376)
T 3a06_A 150 QVME-----PEVEKVVLTAS---GGALRDWKISKIDRARPEDVLKHPVWNMGARITVDSATMVNKAFEVLE-AMELFELP 220 (376)
T ss_dssp HHCC-----SSCSEEEEEEC---CCTTSSSCHHHHTTCCGGGTCCCSSCCCCHHHHHHHHHTHHHHHHHHH-HHHHHTCC
T ss_pred HHHH-----hhhceEEEecc---CCcccCCCHHHHhhCCHHHhccCCCCCCCCeEEecHHHHHHHHHHHHH-HHHHcCCC
Confidence 9887 45777765443 333221 1 1467654332 36678999999999 99999988
Q ss_pred CeEEEEecccccccCccccCCCCCcccccEEEEEEecCCcEEE
Q 017143 207 PMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENGSRGM 249 (376)
Q Consensus 207 ~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~ 249 (376)
+.+|.+..+. .+..+.+++|.||.+..
T Consensus 221 ~~~I~vvvHp----------------qSiIHsmVef~DGsv~A 247 (376)
T 3a06_A 221 FEKIEVKIHR----------------EGLVHGAVVLPDGNVKM 247 (376)
T ss_dssp GGGEEEEECT----------------TCCEEEEEECTTSCEEE
T ss_pred hheEEEEECC----------------CCeEEEEEEEcCCcEEE
Confidence 8888887431 36799999999998765
No 57
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=99.75 E-value=1.5e-19 Score=166.50 Aligned_cols=146 Identities=15% Similarity=0.142 Sum_probs=109.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC----------------CCccCCHHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP----------------LKVFPGHQEL 69 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 69 (376)
++||||||+|.+|+.|++.+... ++++|++|+|++++ .+..+++++|++ +..+++++++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~--~~~elvav~d~~~~---~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l 76 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQ--DDMELIGITKTKPD---FEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDL 76 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEEESSCS---HHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHH
T ss_pred CcEEEEEeEhHHHHHHHHHHhcC--CCCEEEEEEcCCHH---HHHHHHHhcCccccccccccceeccCCceEEcCcHHHh
Confidence 58999999999999999999888 89999999999876 455666666543 1467899999
Q ss_pred hhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCH------HHHHHHHHHHHhCCCeEEEEeeccc-cCHH
Q 017143 70 LDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTV------ADCKKVVDAARKRPDILVQVGLEYR-YMPP 142 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~------~e~~~l~~~a~~~~~~~~~v~~~~r-~~p~ 142 (376)
+. ++|+|++|||+..|++.+.++++ +||||+||||...+. .+.. .+.. +..++....++... +.|.
T Consensus 77 ~~--~vDvV~~aTp~~~h~~~a~~~l~--aGk~Vi~sap~~~d~~~~~~v~~vn--~~~~-~~~~ii~~~~C~t~~l~P~ 149 (334)
T 2czc_A 77 LE--KVDIIVDATPGGIGAKNKPLYEK--AGVKAIFQGGEKADVAEVSFVAQAN--YEAA-LGKNYVRVVSCNTTGLVRT 149 (334)
T ss_dssp HT--TCSEEEECCSTTHHHHHHHHHHH--HTCEEEECTTSCGGGSSEEECHHHH--GGGG-TTCSEEEECCHHHHHHHHH
T ss_pred cc--CCCEEEECCCccccHHHHHHHHH--cCCceEeecccccccccceEEeccC--HHHH-hhCCcEEecCcHHHHHHHH
Confidence 96 59999999999999999999999 899999999984211 0111 0112 12245555555444 4588
Q ss_pred HHHHHHHHHcCCCCceEEEEE
Q 017143 143 VAKLIQIVKSGSIGQVKMVAI 163 (376)
Q Consensus 143 ~~~~k~~i~~g~iG~i~~~~~ 163 (376)
++.+++.|++|.+|++..+..
T Consensus 150 ~~~l~~~I~~g~i~ti~a~s~ 170 (334)
T 2czc_A 150 LSAIREYADYVYAVMIRRAAD 170 (334)
T ss_dssp HHHHGGGEEEEEEEEEEESSC
T ss_pred HHHHHHHhccccEEEEEEecC
Confidence 888887777766666655443
No 58
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=99.73 E-value=3.8e-17 Score=150.42 Aligned_cols=211 Identities=14% Similarity=0.126 Sum_probs=160.0
Q ss_pred ceeEEEEeC-ChhhHHHHHHhhhhcCCC-cEEEEE-eCCChhhHHHHHHHHHhcCCCC-Cc-----c-------------
Q 017143 6 TVKYGIIGM-GMMGREHFINLHHLRSQG-VSVVCI-ADPHLQSRQQALKLANAFDWPL-KV-----F------------- 63 (376)
Q Consensus 6 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~-~~~~~v-~d~~~~~~~~~~~~~~~~~~~~-~~-----~------------- 63 (376)
|+||+|+|+ |.+|..++..+.++ ++ ++++++ ++++.+ ++.+.+++|+.+. .+ +
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~--p~~~~v~al~ag~ni~---~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~ 78 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERN--LDRYQVIALTANRNVK---DLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVE 78 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT--GGGEEEEEEEESSCHH---HHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSE
T ss_pred ceEEEEECCCeEeHHHHHHHHHhC--cCcEEEEEEEcCCCHH---HHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcE
Confidence 489999999 99999999999888 65 999999 888776 6667777777651 11 1
Q ss_pred -----CCHHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEe-cCCCCCHHHHHHHHHHHHhCCCeEEEEeecc
Q 017143 64 -----PGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVE-KPLCTTVADCKKVVDAARKRPDILVQVGLEY 137 (376)
Q Consensus 64 -----~~~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~E-KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~ 137 (376)
++++++++++ +|+|+.+++...|...+++|++ +||||.++ |+ ..+....+|.++|++ +|+.+...
T Consensus 79 v~~g~~~~~el~~~~-iDvVV~ai~G~aGl~ptlaAi~--aGK~VvlANKE--~lv~~G~~l~~~A~~-~gv~liPV--- 149 (388)
T 1r0k_A 79 AAAGADALVEAAMMG-ADWTMAAIIGCAGLKATLAAIR--KGKTVALANKE--SLVSAGGLMIDAVRE-HGTTLLPV--- 149 (388)
T ss_dssp EEESHHHHHHHHTSC-CSEEEECCCSGGGHHHHHHHHH--TTSEEEECCSH--HHHTTHHHHHHHHHH-HTCEEEEC---
T ss_pred EEeCccHHHHHHcCC-CCEEEEeCCCHHHHHHHHHHHH--CCCEEEEeCcH--HHHhhHHHHHHHHHH-cCCEEEEe---
Confidence 1123577777 9999999998899999999999 99999996 96 577888889999954 58887654
Q ss_pred ccCHHHHHHHHHHHcCCCCceEEEEEeeccCCccccc---------------Cccccccc--cCCcccccccccHHHHHH
Q 017143 138 RYMPPVAKLIQIVKSGSIGQVKMVAIREHRFPFLVKV---------------NDWNRFNE--NTGGTLVEKCCHFFDLMR 200 (376)
Q Consensus 138 r~~p~~~~~k~~i~~g~iG~i~~~~~~~~~~~~~~~~---------------~~w~~~~~--~~gG~l~d~g~H~ld~~~ 200 (376)
++....+++.+..+.+++|..+......+++.... ++|..-.+ .-+..+++.|.|.++ +.
T Consensus 150 --Dseh~Ai~q~L~g~~i~~v~~IilTaSGGpfr~~~~~~l~~vt~~~Al~hp~W~mG~KitiDSAtm~NkglevIE-a~ 226 (388)
T 1r0k_A 150 --DSEHNAIFQCFPHHNRDYVRRIIITASGGPFRTTSLAEMATVTPERAVQHPNWSMGAKISIDSATMMNKGLELIE-AF 226 (388)
T ss_dssp --SHHHHHHHHHCCTTCGGGEEEEEEEECCCTTTTCCHHHHTTCCHHHHHC------CHHHHHHHHHTHHHHHHHHH-HH
T ss_pred --chhHHHHHHHhhCCCccceeEEEEEeecccccCCCHHHHhcCCHHHhccCCCCCCcchhhhHHHHHHcCcCcccc-cc
Confidence 77788999999888888998877655454333211 35665433 225678999999999 99
Q ss_pred HHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecCCcEEE
Q 017143 201 LFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENGSRGM 249 (376)
Q Consensus 201 ~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~~ 249 (376)
||||.++.+|.+..+. .+..+.+++|.||.+..
T Consensus 227 ~Lf~~~~~~I~vvvhp----------------qsiihsmV~f~dGsv~a 259 (388)
T 1r0k_A 227 HLFQIPLEKFEILVHP----------------QSVIHSMVEYLDGSILA 259 (388)
T ss_dssp HHHCCCGGGEEEEECT----------------TCCEEEEEEETTSCEEE
T ss_pred ccCCCCHHHeeeeech----------------hHeeEEEEEEcCCcEEE
Confidence 9999878888776431 24679999999998765
No 59
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=99.73 E-value=1.6e-18 Score=158.16 Aligned_cols=189 Identities=11% Similarity=0.118 Sum_probs=135.3
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCC--------CcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQ--------GVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~--------~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D 76 (376)
+++||||||+|.+|+.|+..+.+. + +++|++|+|++.++ ++ .++. ...|+|+++++ ++|
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~--~~~l~~~g~~~~lvaV~d~~~~~---~~----~~~~-~~~~~d~~~ll---~iD 68 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLER--AEELSAFGVVPRFLGVLVRDPRK---PR----AIPQ-ELLRAEPFDLL---EAD 68 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--GGGGGGGTEEEEEEEEECSCTTS---CC----SSCG-GGEESSCCCCT---TCS
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhC--hhhHhhcCCCEEEEEEEECCHHH---hh----ccCc-ccccCCHHHHh---CCC
Confidence 579999999999999999998876 4 78999999998763 21 2222 25788999999 599
Q ss_pred EEEEeCCCCc-cHHHHHHHHcCCCCCeEEE--ecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcC
Q 017143 77 VVVVSTPNMT-HYQILMDIINHPKPHHVLV--EKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSG 153 (376)
Q Consensus 77 ~V~i~t~~~~-h~~~~~~al~~~~g~~Vl~--EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g 153 (376)
+|++|||+.. |++++++||+ +||||+| +||++ +++++|.++| +++ ...+.+....+.|.++.+| .+.++
T Consensus 69 vVve~t~~~~~a~~~~~~AL~--aGKhVVtaNkkpla---~~~~eL~~~A-~~~-~~~~Ea~vg~giPii~~l~-~l~~~ 140 (332)
T 2ejw_A 69 LVVEAMGGVEAPLRLVLPALE--AGIPLITANKALLA---EAWESLRPFA-EEG-LIYHEASVMAGTPALSFLE-TLRGS 140 (332)
T ss_dssp EEEECCCCSHHHHHHHHHHHH--TTCCEEECCHHHHH---HSHHHHHHHH-HTT-CEECGGGTTTTSSSHHHHH-HHTTS
T ss_pred EEEECCCCcHHHHHHHHHHHH--cCCeEEECCchhHH---HHHHHHHHHH-HhC-CeEEEEEcccCCHHHHHHH-HhcCC
Confidence 9999999884 5789999999 9999999 78987 7899999999 553 4555566666679999999 99988
Q ss_pred CCCceEEEEEeeccCCcccccCcccccc------cc----CCcccccccccH----HHHHHHH-hCC--CCeEEEEecc
Q 017143 154 SIGQVKMVAIREHRFPFLVKVNDWNRFN------EN----TGGTLVEKCCHF----FDLMRLF-VGS--NPMRVMASGA 215 (376)
Q Consensus 154 ~iG~i~~~~~~~~~~~~~~~~~~w~~~~------~~----~gG~l~d~g~H~----ld~~~~l-~G~--~~~~V~a~~~ 215 (376)
+||+|..+-.-...+ -+.....|..+. +. ..++..|+.-++ +.++.++ ||. ++.+|...+-
T Consensus 141 ~I~~I~gI~nGT~ny-il~~m~~g~~f~~~l~eAq~~GyaE~dP~~Dv~G~d~a~Kl~iLa~~~~G~~~~~~~v~~egi 218 (332)
T 2ejw_A 141 ELLELHGILNGTTLY-ILQEMEKGRTYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGI 218 (332)
T ss_dssp EEEEEEEECCHHHHH-HHHHHHTTCCHHHHHHHHHHTTSSCSSCHHHHTTHHHHHHHHHHHHHHTCTTCCGGGCEECCS
T ss_pred CcceEEEEEeccccc-ccCccccCCCHHHHHHHHHHCCCCCCCCccccCchhHHHHHHHHHHHHhCCCCCHHHeEecCc
Confidence 888887763210000 000111222211 11 135666665444 7788887 896 3466766543
No 60
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=99.72 E-value=2.3e-17 Score=150.28 Aligned_cols=153 Identities=12% Similarity=0.137 Sum_probs=116.4
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhc----CCCcEEEEEeCCChhh------HHHHHHHHHhcC-CCCCccCCHHHHhhC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLR----SQGVSVVCIADPHLQS------RQQALKLANAFD-WPLKVFPGHQELLDS 72 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~----~~~~~~~~v~d~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 72 (376)
|+++||+|||+|.+|+.++..+.+.. .++++|++|+|++... .++..+..++++ ++...| ++++++.+
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~ 80 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMG 80 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTT
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcC
Confidence 56899999999999999999887631 2689999999998642 223333444455 431134 78999999
Q ss_pred CCCCEEEEeCCCCcc----HHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeE-EEEeeccccCHHHHHHH
Q 017143 73 GLCDVVVVSTPNMTH----YQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDIL-VQVGLEYRYMPPVAKLI 147 (376)
Q Consensus 73 ~~~D~V~i~t~~~~h----~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~-~~v~~~~r~~p~~~~~k 147 (376)
+++|+|++|||+..| ++++++||+ +||||.++++. ...++.++|.++|+++ |+. ++.+....+.|.++.+|
T Consensus 81 ~~iDvVVe~T~~~~~~~pa~~~~~~aL~--aGkhVVtaNK~-~la~~~~eL~~lA~~~-g~~~~~Ea~vg~giPii~~l~ 156 (325)
T 3ing_A 81 EAADLLVDCTPASRDGVREYSLYRMAFE--SGMNVVTANKS-GLANKWHDIMDSANQN-SKYIRYEATVAGGVPLFSVLD 156 (325)
T ss_dssp SCCSEEEECCCCCSSSHHHHHHHHHHHH--TTCEEEECCCH-HHHHHHHHHHHHHHHH-TCCEECGGGSSTTSCCHHHHH
T ss_pred CCCCEEEECCCCccccchHHHHHHHHHH--CCCeEEEcCch-hHHHHHHHHHHHHHHc-CCeEEEEeeecccCHHHHHHH
Confidence 999999999999877 589999999 99999997553 2348999999999554 664 44556667899999999
Q ss_pred HHHHcCCCCceEEE
Q 017143 148 QIVKSGSIGQVKMV 161 (376)
Q Consensus 148 ~~i~~g~iG~i~~~ 161 (376)
+++..++|++|..+
T Consensus 157 ~~l~g~~I~~i~Gi 170 (325)
T 3ing_A 157 YSILPSKVKRFRGI 170 (325)
T ss_dssp HTCTTCCEEEEEEE
T ss_pred HHhhCCCeeEEEEE
Confidence 99976566665544
No 61
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=99.66 E-value=8.8e-17 Score=146.04 Aligned_cols=100 Identities=18% Similarity=0.210 Sum_probs=88.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhh-hcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhC---CCCCEEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHH-LRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDS---GLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~-~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~D~V~i 80 (376)
+++||||||+|.+|..|+..+.+ . +++++++++|+++++ .++++++++|++ ..++++++++++ +++|+|++
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~--~~~elvav~d~~~~~--~~~~~a~~~g~~-~~~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNA--KYLEMGAMVGIDAAS--DGLARAQRMGVT-TTYAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHC--SSEEEEEEECSCTTC--HHHHHHHHTTCC-EESSHHHHHHHSGGGGGEEEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhC--cCeEEEEEEeCChhh--hHHHHHHHcCCC-cccCCHHHHHhccCCCCCcEEEE
Confidence 57999999999999999999866 6 899999999999873 256777888875 446789999987 67999999
Q ss_pred eCCCCccHHHHHHHHcCCC--CCeEEEecCCCC
Q 017143 81 STPNMTHYQILMDIINHPK--PHHVLVEKPLCT 111 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~--g~~Vl~EKP~a~ 111 (376)
+||+..|.+++.+|++ + ||||+||||.+.
T Consensus 78 atp~~~h~~~a~~al~--a~~Gk~Vi~ekp~~~ 108 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQ--AKPGIRLIDLTPAAI 108 (312)
T ss_dssp CSCHHHHHHHHHHHHH--HCTTCEEEECSTTCS
T ss_pred CCChHHHHHHHHHHHH--hCCCCEEEEcCcccc
Confidence 9999999999999999 8 999999999864
No 62
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.65 E-value=3.2e-16 Score=137.55 Aligned_cols=112 Identities=21% Similarity=0.194 Sum_probs=95.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
+||||||+|.||+.|+..+. . +++++++++|+++. ++ ..|+|++++++ +++|+|++|+|++.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~--~g~~lv~v~d~~~~----~~----------~~~~~~~~l~~-~~~DvVv~~~~~~~ 62 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-R--NGFEIAAILDVRGE----HE----------KMVRGIDEFLQ-REMDVAVEAASQQA 62 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-H--TTCEEEEEECSSCC----CT----------TEESSHHHHTT-SCCSEEEECSCHHH
T ss_pred CEEEEECCCHHHHHHHHHHh-c--CCCEEEEEEecCcc----hh----------hhcCCHHHHhc-CCCCEEEECCCHHH
Confidence 58999999999999999887 4 78999999998853 11 16889999996 56999999999999
Q ss_pred cHHHHHHHHcCCCCCeEEEecCCCCCHHHH-HHHHHHHHhCCCeEEEEeecccc
Q 017143 87 HYQILMDIINHPKPHHVLVEKPLCTTVADC-KKVVDAARKRPDILVQVGLEYRY 139 (376)
Q Consensus 87 h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~-~~l~~~a~~~~~~~~~v~~~~r~ 139 (376)
|.+++..+++ +|+||+||||++.+..++ ++|.+++++ +|+.+++..+..-
T Consensus 63 ~~~~~~~~l~--~G~~vv~~~~~~~~~~~~~~~l~~~a~~-~g~~~~i~~~~~g 113 (236)
T 2dc1_A 63 VKDYAEKILK--AGIDLIVLSTGAFADRDFLSRVREVCRK-TGRRVYIASGAIG 113 (236)
T ss_dssp HHHHHHHHHH--TTCEEEESCGGGGGSHHHHHHHHHHHHH-HCCCEEECCTTCS
T ss_pred HHHHHHHHHH--CCCcEEEECcccCChHHHHHHHHHHHHh-cCCeEEecCcccc
Confidence 9999999999 999999999999998888 899999954 4777766555433
No 63
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=99.55 E-value=3.5e-15 Score=132.90 Aligned_cols=151 Identities=17% Similarity=0.139 Sum_probs=111.7
Q ss_pred CCCCCceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC---CCccCCHHHHhhCCCCC
Q 017143 1 MAANDTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP---LKVFPGHQELLDSGLCD 76 (376)
Q Consensus 1 m~~~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~D 76 (376)
|+ |+++||+|+|+ |.||+.++..+... ++++|++++|+++++.. .+.+.+..++. +..+++++++++ ++|
T Consensus 1 ~~-~~~mkV~V~Ga~G~mG~~~~~~~~~~--~~~elva~~d~~~~~~~-g~d~~~~~g~~~~~v~~~~dl~~~l~--~~D 74 (273)
T 1dih_A 1 MH-DANIRVAIAGAGGRMGRQLIQAALAL--EGVQLGAALEREGSSLL-GSDAGELAGAGKTGVTVQSSLDAVKD--DFD 74 (273)
T ss_dssp -C-CCBEEEEETTTTSHHHHHHHHHHHHS--TTEECCCEECCTTCTTC-SCCTTCSSSSSCCSCCEESCSTTTTT--SCS
T ss_pred CC-CCCcEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCchhhh-hhhHHHHcCCCcCCceecCCHHHHhc--CCC
Confidence 55 45799999998 99999999988877 89999999998764210 11111112211 236889999986 489
Q ss_pred EEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCC
Q 017143 77 VVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIG 156 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG 156 (376)
+|+.+|+|..|.+++..|++ +|+||+|+|| +.+.++..+|.+++ ++.++.+..++....+...+.++++.+ .++
T Consensus 75 vVIDft~p~~~~~~~~~a~~--~G~~vVigTt-G~~~e~~~~L~~~a-~~~~vv~a~N~siGvn~~~~l~~~aa~--~~~ 148 (273)
T 1dih_A 75 VFIDFTRPEGTLNHLAFCRQ--HGKGMVIGTT-GFDEAGKQAIRDAA-ADIAIVFAANFSVGVNVMLKLLEKAAK--VMG 148 (273)
T ss_dssp EEEECSCHHHHHHHHHHHHH--TTCEEEECCC-CCCHHHHHHHHHHT-TTSCEEECSCCCHHHHHHHHHHHHHHH--HHT
T ss_pred EEEEcCChHHHHHHHHHHHh--CCCCEEEECC-CCCHHHHHHHHHhc-CCCCEEEEecCcHHHHHHHHHHHHHHH--hcC
Confidence 99999999999999999999 9999999999 68899999999998 555666655555555555555555544 243
Q ss_pred ---ceEEEEE
Q 017143 157 ---QVKMVAI 163 (376)
Q Consensus 157 ---~i~~~~~ 163 (376)
+|..++.
T Consensus 149 ~~~dieiiE~ 158 (273)
T 1dih_A 149 DYTDIEIIEA 158 (273)
T ss_dssp TTSEEEEEEE
T ss_pred CCCCEEEEEe
Confidence 6666665
No 64
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=99.51 E-value=4.2e-13 Score=120.60 Aligned_cols=182 Identities=15% Similarity=0.148 Sum_probs=127.0
Q ss_pred CCceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 4 NDTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 4 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
.+++||+|+|+ |.+|+.|+..+.+. ++++++.+++.... .+.+|++ +|+|++++++++++|+|+|++
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~---g~~~V~~V~p~~~g-------~~~~G~~--vy~sl~el~~~~~~D~viI~t 72 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAY---GTKMVGGVTPGKGG-------TTHLGLP--VFNTVREAVAATGATASVIYV 72 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCTT-------CEETTEE--EESSHHHHHHHHCCCEEEECC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC---CCeEEEEeCCCccc-------ceeCCee--ccCCHHHHhhcCCCCEEEEec
Confidence 45799999998 99999999998876 57888888875310 1146766 899999999854599999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeecc--------c---cCHHHHHHHHHHH
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEY--------R---YMPPVAKLIQIVK 151 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~--------r---~~p~~~~~k~~i~ 151 (376)
|+..|.+.+.+|++ +|++++++.+...+.++.++|.+++++ .++.+ +|.|+ + +.|.. ..+
T Consensus 73 P~~~~~~~~~ea~~--~Gi~~iVi~t~G~~~~~~~~l~~~A~~-~gv~l-iGPNc~Gi~~p~~~~~~~~~~~-----~~~ 143 (288)
T 2nu8_A 73 PAPFCKDSILEAID--AGIKLIITITEGIPTLDMLTVKVKLDE-AGVRM-IGPNTPGVITPGECKIGIQPGH-----IHK 143 (288)
T ss_dssp CGGGHHHHHHHHHH--TTCSEEEECCCCCCHHHHHHHHHHHHH-HTCEE-ECSSCCEEEETTTEEEESSCTT-----SCC
T ss_pred CHHHHHHHHHHHHH--CCCCEEEEECCCCCHHHHHHHHHHHHH-cCCEE-EecCCcceecCCcceeEecccC-----CCC
Confidence 99999999999999 999999999988999999999999955 58765 56555 2 33321 112
Q ss_pred cCCCCceEEEEEeeccCCccc------ccCccccccccCCcccccccccHHHHHHHHhCCCCeEEEE
Q 017143 152 SGSIGQVKMVAIREHRFPFLV------KVNDWNRFNENTGGTLVEKCCHFFDLMRLFVGSNPMRVMA 212 (376)
Q Consensus 152 ~g~iG~i~~~~~~~~~~~~~~------~~~~w~~~~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a 212 (376)
-|+|-.+.- +..... ....|....-.+-|.-.+.++|..|++.||.+++-+++-.
T Consensus 144 ---~G~i~~vsq---SG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~ 204 (288)
T 2nu8_A 144 ---PGKVGIVSR---SGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIV 204 (288)
T ss_dssp ---EEEEEEEES---CHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEE
T ss_pred ---CCCEEEEEC---cHHHHHHHHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEE
Confidence 244443332 111111 1122221112233334455899999999999965444433
No 65
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=99.37 E-value=6.2e-14 Score=119.53 Aligned_cols=101 Identities=10% Similarity=0.050 Sum_probs=83.4
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+..|++|||+|.+|..|+..+... . +++++|++|.++++ ..+... |+++..++++++++++ ++|+|+||+|+
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~-~-g~~iVg~~D~dp~k---~g~~i~--gv~V~~~~dl~ell~~-~ID~ViIA~Ps 150 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFG-E-SFELRGFFDVDPEK---VGRPVR--GGVIEHVDLLPQRVPG-RIEIALLTVPR 150 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCC-S-SEEEEEEEESCTTT---TTCEET--TEEEEEGGGHHHHSTT-TCCEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHhHhhc-C-CcEEEEEEeCCHHH---Hhhhhc--CCeeecHHhHHHHHHc-CCCEEEEeCCc
Confidence 468999999999999998864443 3 89999999999883 322222 4444457899999998 89999999999
Q ss_pred CccHHHHHHHHcCCCCCe-EEEecCCCCCHHH
Q 017143 85 MTHYQILMDIINHPKPHH-VLVEKPLCTTVAD 115 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~-Vl~EKP~a~~~~e 115 (376)
..|.+++..+++ +|++ |++|||+++++.+
T Consensus 151 ~~~~ei~~~l~~--aGi~~Ilnf~P~~l~vp~ 180 (211)
T 2dt5_A 151 EAAQKAADLLVA--AGIKGILNFAPVVLEVPK 180 (211)
T ss_dssp HHHHHHHHHHHH--HTCCEEEECSSSCCCCCT
T ss_pred hhHHHHHHHHHH--cCCCEEEECCcccccCCC
Confidence 999999999999 7877 8999999998875
No 66
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=99.32 E-value=2.1e-12 Score=123.41 Aligned_cols=189 Identities=16% Similarity=0.154 Sum_probs=129.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC-C-----CCCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD-W-----PLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~l~~~~~D~V~ 79 (376)
+.+|+|+|+|.+|+.++..|.+. +.+ +.+++++++ ++++++++++ + ++.-.++++++++ ++|+|+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~---G~~-V~v~~R~~~---~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVI 73 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS---GIK-VTVACRTLE---SAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVI 73 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT---TCE-EEEEESSHH---HHHHTTTTCTTEEEEECCTTCHHHHHHHHT--TSSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---cCE-EEEEECCHH---HHHHHHHhcCCceEEEeecCCHHHHHHHHc--CCcEEE
Confidence 46899999999999999998864 577 557899877 5666665543 1 1111124556676 499999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcC-CC-Cc
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSG-SI-GQ 157 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g-~i-G~ 157 (376)
.++|...|..++..+++ +|+||+++ +....+..+|.++|++ .|+.++.++..+..+....++++++++ .+ |+
T Consensus 74 n~a~~~~~~~i~~a~l~--~g~~vvd~---~~~~~~~~~l~~aA~~-aGv~~i~g~g~~pg~~~~~a~~li~q~~~~gg~ 147 (450)
T 1ff9_A 74 SLIPYTFHATVIKSAIR--QKKHVVTT---SYVSPAMMELDQAAKD-AGITVMNEIGLDPGIDHLYAIKTIEEVHAAGGK 147 (450)
T ss_dssp ECCC--CHHHHHHHHHH--HTCEEEES---SCCCHHHHHTHHHHHH-TTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCE
T ss_pred ECCccccchHHHHHHHh--CCCeEEEe---ecccHHHHHHHHHHHH-CCCeEEeCCCCcCchHHHHHHHHHHHhcccCCe
Confidence 99999999998999999 88999998 4455678899999955 599999999999999999999999875 33 56
Q ss_pred eEEEEEeeccCCccc-ccCccccc-cccCCcccccccccHHHHHHHHhCCCCeEEEEe
Q 017143 158 VKMVAIREHRFPFLV-KVNDWNRF-NENTGGTLVEKCCHFFDLMRLFVGSNPMRVMAS 213 (376)
Q Consensus 158 i~~~~~~~~~~~~~~-~~~~w~~~-~~~~gG~l~d~g~H~ld~~~~l~G~~~~~V~a~ 213 (376)
+..+.......+... ....|.+. .....|.+. |..+.+.++.+.+..+|.+.
T Consensus 148 i~~~~~~~G~~p~~~~~~~~l~~~~~~s~~g~l~----~~~~~~~~~~~G~~~~v~~~ 201 (450)
T 1ff9_A 148 IKTFLSYCGGLPAPESSDNPLGYKFSWSSRGVLL----ALRNAASFYKDGKVTNVAGP 201 (450)
T ss_dssp EEEEEEEEEEEECGGGCCSTTSCCCSSCHHHHHH----HTTSCEEEEETTEEEEECTH
T ss_pred eeEEEEEEcccCccccCCccccceeccChHHHHH----HhhChhheEeCCeEEEEeCc
Confidence 666554322221111 11222221 111123333 66778888885467777665
No 67
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=99.31 E-value=8.8e-12 Score=110.73 Aligned_cols=148 Identities=12% Similarity=0.118 Sum_probs=109.7
Q ss_pred CCCCceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH--HHHHHH--HhcCCCCCccCCHHHHhhCCCCC
Q 017143 2 AANDTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ--QALKLA--NAFDWPLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 2 ~~~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~l~~~~~D 76 (376)
.+++++||+|+| +|.||+.++..+.+. ++++|++++|+++.... .+.+++ ...|++ +++|+++++.. +|
T Consensus 17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~--v~~dl~~ll~~--aD 90 (288)
T 3ijp_A 17 QGPGSMRLTVVGANGRMGRELITAIQRR--KDVELCAVLVRKGSSFVDKDASILIGSDFLGVR--ITDDPESAFSN--TE 90 (288)
T ss_dssp ----CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCB--CBSCHHHHTTS--CS
T ss_pred hccCCeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCCccccccchHHhhccCcCCce--eeCCHHHHhcC--CC
Confidence 445689999999 899999999998887 89999999999753110 011111 124544 89999999974 89
Q ss_pred EEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH--cCC
Q 017143 77 VVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK--SGS 154 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~--~g~ 154 (376)
+|+.+|+|..+.+.+..|++ +|++|.+-... .+.++..+|.++| ++ +. +-+...|+..+..+.++++ +..
T Consensus 91 VvIDFT~p~a~~~~~~~~l~--~Gv~vViGTTG-~~~e~~~~L~~aa-~~--~~--~~~a~N~SiGv~ll~~l~~~aa~~ 162 (288)
T 3ijp_A 91 GILDFSQPQASVLYANYAAQ--KSLIHIIGTTG-FSKTEEAQIADFA-KY--TT--IVKSGNMSLGVNLLANLVKRAAKA 162 (288)
T ss_dssp EEEECSCHHHHHHHHHHHHH--HTCEEEECCCC-CCHHHHHHHHHHH-TT--SE--EEECSCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHH--cCCCEEEECCC-CCHHHHHHHHHHh-Cc--CC--EEEECCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 89999997764 5788888999999 54 33 3556677887777777663 234
Q ss_pred CC---ceEEEEE
Q 017143 155 IG---QVKMVAI 163 (376)
Q Consensus 155 iG---~i~~~~~ 163 (376)
++ +|.-++.
T Consensus 163 l~~~~dieIiE~ 174 (288)
T 3ijp_A 163 LDDDFDIEIYEM 174 (288)
T ss_dssp SCTTSEEEEEEE
T ss_pred cCCCCCEEEEEc
Confidence 55 5555555
No 68
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=99.30 E-value=6.1e-12 Score=111.45 Aligned_cols=146 Identities=11% Similarity=0.096 Sum_probs=109.2
Q ss_pred CCceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH--HHHHHHH-hcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 4 NDTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ--QALKLAN-AFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 4 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|+|+||+|+| +|.+|+.++..+.+. ++++|++++|++..... .+.+++. ..++ ..++|+++++++ +|+|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv--~v~~dl~~ll~~--~DVVI 78 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAA--PDATLVGALDRTGSPQLGQDAGAFLGKQTGV--ALTDDIERVCAE--ADYLI 78 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHC--TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSC--BCBCCHHHHHHH--CSEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEEecCcccccccHHHHhCCCCCc--eecCCHHHHhcC--CCEEE
Confidence 4579999999 899999999999887 89999999998754210 0111110 1144 478999999985 89999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH--cCCCC-
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK--SGSIG- 156 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~--~g~iG- 156 (376)
.+|+|..+.+++..|++ +|++|.+-... .+.++..+|.++| ++ .. +-+...|+..+..+.++++ +..++
T Consensus 79 DfT~p~a~~~~~~~al~--~G~~vVigTTG-~s~~~~~~L~~aa-~~--~~--vv~a~N~s~Gv~l~~~~~~~aa~~l~~ 150 (272)
T 4f3y_A 79 DFTLPEGTLVHLDAALR--HDVKLVIGTTG-FSEPQKAQLRAAG-EK--IA--LVFSANMSVGVNVTMKLLEFAAKQFAQ 150 (272)
T ss_dssp ECSCHHHHHHHHHHHHH--HTCEEEECCCC-CCHHHHHHHHHHT-TT--SE--EEECSCCCHHHHHHHHHHHHHHHHTSS
T ss_pred EcCCHHHHHHHHHHHHH--cCCCEEEECCC-CCHHHHHHHHHHh-cc--CC--EEEECCCCHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999 99999997764 6888888999998 54 23 3556677777777776663 23455
Q ss_pred --ceEEEEE
Q 017143 157 --QVKMVAI 163 (376)
Q Consensus 157 --~i~~~~~ 163 (376)
+|.-++.
T Consensus 151 ~~diei~E~ 159 (272)
T 4f3y_A 151 GYDIEIIEA 159 (272)
T ss_dssp SCEEEEEEE
T ss_pred CCCEEEEEe
Confidence 4544554
No 69
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=99.28 E-value=1e-11 Score=108.15 Aligned_cols=130 Identities=12% Similarity=0.073 Sum_probs=99.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
|+||+|+|+|.||+.++..+.+. ++ +|++++|++... .+|++ .|+|+++++ ++|+|+.+|+|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~-eLva~~d~~~~~---------~~gv~--v~~dl~~l~---~~DVvIDft~p~ 65 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GH-EIVGVIENTPKA---------TTPYQ--QYQHIADVK---GADVAIDFSNPN 65 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TC-EEEEEECSSCC-----------CCSC--BCSCTTTCT---TCSEEEECSCHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CC-EEEEEEecCccc---------cCCCc--eeCCHHHHh---CCCEEEEeCChH
Confidence 68999999999999999999887 78 999999998761 35765 899999988 489999888877
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH--cCCCCceEEEEE
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK--SGSIGQVKMVAI 163 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~--~g~iG~i~~~~~ 163 (376)
...+.+. ++ +|+++.+..+. .+.++.++|.++| ++ ..+ -+...|+-.+..+.++++ +..+++ +.+++
T Consensus 66 a~~~~~~--l~--~g~~vVigTTG-~s~e~~~~l~~aa-~~--~~v--~~a~N~S~Gv~l~~~~~~~aa~~l~~-~dieI 134 (243)
T 3qy9_A 66 LLFPLLD--ED--FHLPLVVATTG-EKEKLLNKLDELS-QN--MPV--FFSANMSYGVHALTKILAAAVPLLDD-FDIEL 134 (243)
T ss_dssp HHHHHHT--SC--CCCCEEECCCS-SHHHHHHHHHHHT-TT--SEE--EECSSCCHHHHHHHHHHHHHHHHTTT-SEEEE
T ss_pred HHHHHHH--Hh--cCCceEeCCCC-CCHHHHHHHHHHH-hc--CCE--EEECCccHHHHHHHHHHHHHHHhcCC-CCEEE
Confidence 7667765 88 89999999884 7888899999999 54 343 445567777776666663 234553 34443
No 70
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=99.21 E-value=1.7e-12 Score=110.79 Aligned_cols=102 Identities=12% Similarity=0.163 Sum_probs=77.6
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
++.|++|||+|.+|..++..+.. ...+++++|++|.++++ ..+... |+++..++++++++++. |+|+||+|.
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~-~~~g~~iVg~~D~dp~k---~g~~i~--gv~V~~~~dl~eli~~~--D~ViIAvPs 155 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFT-KNNNTKISMAFDINESK---IGTEVG--GVPVYNLDDLEQHVKDE--SVAILTVPA 155 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC-------CCEEEEEESCTTT---TTCEET--TEEEEEGGGHHHHCSSC--CEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHhc-ccCCcEEEEEEeCCHHH---HHhHhc--CCeeechhhHHHHHHhC--CEEEEecCc
Confidence 35799999999999998884222 12689999999999983 322222 44444578899999874 999999999
Q ss_pred CccHHHHHHHHcCCCCCe-EEEecCCCCCHHHH
Q 017143 85 MTHYQILMDIINHPKPHH-VLVEKPLCTTVADC 116 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~-Vl~EKP~a~~~~e~ 116 (376)
..|.+++..+++ +|++ |++|||+.+++.++
T Consensus 156 ~~~~ei~~~l~~--aGi~~Ilnf~P~~l~vp~~ 186 (215)
T 2vt3_A 156 VAAQSITDRLVA--LGIKGILNFTPARLNVPEH 186 (215)
T ss_dssp HHHHHHHHHHHH--TTCCEEEECSSCCCCCCTT
T ss_pred hhHHHHHHHHHH--cCCCEEEEcCceeccCCCc
Confidence 999999999999 8888 99999999988653
No 71
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.20 E-value=1.6e-10 Score=102.60 Aligned_cols=101 Identities=20% Similarity=0.330 Sum_probs=79.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||+|||+|.+|..++..+.+. +.+ +.++|++++ +++++++++|+. .++++++++++ .|+|++++|+
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~---g~~-v~~~~~~~~---~~~~~~~~~g~~--~~~~~~~~~~~--~D~Vi~~v~~ 70 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQT---PHE-LIISGSSLE---RSKEIAEQLALP--YAMSHQDLIDQ--VDLVILGIKP 70 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTS---SCE-EEEECSSHH---HHHHHHHHHTCC--BCSSHHHHHHT--CSEEEECSCG
T ss_pred CccEEEEECCCHHHHHHHHHHHhC---CCe-EEEECCCHH---HHHHHHHHcCCE--eeCCHHHHHhc--CCEEEEEeCc
Confidence 357999999999999999888775 444 578999987 566677777865 78899999985 8999999998
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHH
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVV 120 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~ 120 (376)
..|.+++. .++ .|+ ++|++|.+.+.++..++.
T Consensus 71 ~~~~~v~~-~l~--~~~-~vv~~~~~~~~~~l~~~~ 102 (259)
T 2ahr_A 71 QLFETVLK-PLH--FKQ-PIISMAAGISLQRLATFV 102 (259)
T ss_dssp GGHHHHHT-TSC--CCS-CEEECCTTCCHHHHHHHH
T ss_pred HhHHHHHH-Hhc--cCC-EEEEeCCCCCHHHHHHhc
Confidence 77766554 456 566 999999999987655543
No 72
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=99.17 E-value=3e-11 Score=112.20 Aligned_cols=141 Identities=16% Similarity=0.214 Sum_probs=105.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC---CCCCccCCHHHHhhCCCCCEEEEe
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD---WPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
...||+|||+|.+|+.++..|.+. .+ +.|+|++++ ++++++++++ +++..++++++++++ +|+|+.|
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~----~~-V~V~~R~~~---~a~~la~~~~~~~~d~~~~~~l~~ll~~--~DvVIn~ 84 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE----FD-VYIGDVNNE---NLEKVKEFATPLKVDASNFDKLVEVMKE--FELVIGA 84 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT----SE-EEEEESCHH---HHHHHTTTSEEEECCTTCHHHHHHHHTT--CSCEEEC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC----Ce-EEEEECCHH---HHHHHHhhCCeEEEecCCHHHHHHHHhC--CCEEEEC
Confidence 357999999999999998888763 45 568999988 6777776654 111224567788875 8999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHH--HHHHHHcCCCCceE
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAK--LIQIVKSGSIGQVK 159 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~--~k~~i~~g~iG~i~ 159 (376)
+|+..|.+++..|++ +|+|++. ++.+.++.++|.+.|++ .|+.++.+. .|+|.... ++.+++ .++ +.
T Consensus 85 ~P~~~~~~v~~a~l~--~G~~~vD---~s~~~~~~~~l~~~Ak~-aG~~~l~g~--G~dPG~~~~~a~~~~~--~~~-v~ 153 (365)
T 2z2v_A 85 LPGFLGFKSIKAAIK--SKVDMVD---VSFMPENPLELRDEAEK-AQVTIVFDA--GFAPGLSNILMGRIFQ--ELD-LK 153 (365)
T ss_dssp CCHHHHHHHHHHHHH--TTCCEEE---CCCCSSCGGGGHHHHHH-TTCEEECSC--BTTTBHHHHHHHHHHH--HSC-EE
T ss_pred CChhhhHHHHHHHHH--hCCeEEE---ccCCcHHHHHHHHHHHH-cCCEEEECC--CCcchHHHHHHHHHHH--hcC-CC
Confidence 999999999999999 8999987 55556777889999955 488887665 57777654 444444 478 88
Q ss_pred EEEEeec
Q 017143 160 MVAIREH 166 (376)
Q Consensus 160 ~~~~~~~ 166 (376)
.+.+.+.
T Consensus 154 ~i~~~~G 160 (365)
T 2z2v_A 154 EGYIYVG 160 (365)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8877543
No 73
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=99.15 E-value=1.8e-09 Score=94.03 Aligned_cols=128 Identities=15% Similarity=0.165 Sum_probs=99.6
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
+||+|+|+ |.||+.++..+... ++++|++++|++ +++++++.. ++|+|+-+|+|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~--~~~elva~~d~~---------------------~dl~~~~~~-~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA--DDLTLSAELDAG---------------------DPLSLLTDG-NTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC--TTCEEEEEECTT---------------------CCTHHHHHT-TCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEccC---------------------CCHHHHhcc-CCcEEEEccChH
Confidence 58999996 99999999888776 799999999863 346677763 489999999999
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH--cCCCCceEEEEE
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK--SGSIGQVKMVAI 163 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~--~g~iG~i~~~~~ 163 (376)
.+.+++..|++ +|+|+.+.++. .+.++..+|.++|++.+++.++... .|+..+..+.++++ ...+.+|.-++.
T Consensus 57 a~~~~~~~a~~--~g~~~VigTTG-~~~e~~~~l~~aa~~~~~~~vv~a~--N~siGv~ll~~l~~~aa~~~~dieIiE~ 131 (245)
T 1p9l_A 57 VVMGNLEFLID--NGIHAVVGTTG-FTAERFQQVESWLVAKPNTSVLIAP--NFAIGAVLSMHFAKQAARFFDSAEVIEL 131 (245)
T ss_dssp THHHHHHHHHH--TTCEEEECCCC-CCHHHHHHHHHHHHTSTTCEEEECS--CCCHHHHHHHHHHHHHGGGCSEEEEEEE
T ss_pred HHHHHHHHHHH--cCCCEEEcCCC-CCHHHHHHHHHHHHhCCCCCEEEEC--CccHHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 99999999999 99999999994 7888899999999433366665554 45665655666663 334556655655
No 74
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=99.09 E-value=2.2e-10 Score=104.80 Aligned_cols=96 Identities=22% Similarity=0.324 Sum_probs=73.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHHHHHHHHH---hcC-CC----------------CCcc
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQQALKLAN---AFD-WP----------------LKVF 63 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~---~~~-~~----------------~~~~ 63 (376)
++||||+|+|.+|+.+++.+..+ ++++|++|.|+ +++ ....+.+ -+| ++ +.++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~--~~vevvaI~d~~~~~~---~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~ 77 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNS--GKVDIVAINDPFIDLN---YMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIF 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--CSSEEEEEECSSSCHH---HHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEE
T ss_pred ceEEEEEccCHHHHHHHHHHHcC--CCcEEEEecCCCCCHH---HHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEE
Confidence 58999999999999999999888 89999999995 555 3333332 111 00 0112
Q ss_pred --CCHHHH-hhCCCCCEEEEeCCCCccHHHHHHHHcCCCC-CeEEEecC
Q 017143 64 --PGHQEL-LDSGLCDVVVVSTPNMTHYQILMDIINHPKP-HHVLVEKP 108 (376)
Q Consensus 64 --~~~~~~-l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g-~~Vl~EKP 108 (376)
.+.+++ ..+.++|+|+.|||...|.+.+.++++ +| |.|++++|
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~--aGak~V~iSap 124 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQ--GGAKRVIISAP 124 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGG--GTCSEEEESSC
T ss_pred ecCCHHHCccccCCCCEEEECCCchhhHHHHHHHHh--CCCeEEEeccC
Confidence 256666 333469999999999999999999999 77 99999999
No 75
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=99.08 E-value=3.5e-10 Score=103.70 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=75.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC----------------CCccCCHHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP----------------LKVFPGHQEL 69 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 69 (376)
|+||||+|+|.+|+.+++.+.++ +++++++++|+++.. ....+.+.+.. ..+..+.+++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~--~~~elvav~d~~~~~---~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ--DDMKVIGVSKTRPDF---EARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS--SSEEEEEEEESSCSH---HHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC--CCcEEEEEEcCChhH---HHHhcCCcchhhccccccceeeecCCceEEcCCHHHH
Confidence 48999999999999999999888 899999999988653 22333222111 1122467777
Q ss_pred hhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCC
Q 017143 70 LDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPL 109 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~ 109 (376)
+.. +|+|+.|||+..|.+.+.++++ +|++|++++|-
T Consensus 76 ~~~--vDvV~~atp~~~~~~~a~~~l~--aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDE--ADIVIDCTPEGIGAKNLKMYKE--KGIKAIFQGGE 111 (337)
T ss_dssp HHT--CSEEEECCSTTHHHHHHHHHHH--HTCCEEECTTS
T ss_pred hcC--CCEEEECCCchhhHHHHHHHHH--cCCEEEEecCC
Confidence 764 9999999999999999999999 88999999997
No 76
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=99.07 E-value=3.9e-10 Score=106.44 Aligned_cols=148 Identities=14% Similarity=0.139 Sum_probs=107.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcC------CC-----CCccCCHHHHhhCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFD------WP-----LKVFPGHQELLDSGL 74 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~~l~~~~ 74 (376)
.||+|+|+|.+|+.++..+.+. +++ ..+.+++++.+ ++++++++++ +. +.-.+++++++++.+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~---~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~ 76 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLS---KCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVK 76 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHH---HHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHH---HHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhC
Confidence 5899999999999999999887 555 45668899988 4555554432 21 112345778887756
Q ss_pred CCEEEEeCCCCccHHHHHHHHcCCCCCeEE----EecCCC--CCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHH
Q 017143 75 CDVVVVSTPNMTHYQILMDIINHPKPHHVL----VEKPLC--TTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQ 148 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl----~EKP~a--~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~ 148 (376)
+|+|+.++++..|.+++..|++ +|+|++ +++|.. .......++.+.+++ .|+.++.+.. +.|....+..
T Consensus 77 ~DvVin~ag~~~~~~v~~a~l~--~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~-aG~~~i~g~G--~~PG~~~l~a 151 (405)
T 4ina_A 77 PQIVLNIALPYQDLTIMEACLR--TGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKE-KGVMALLGSG--FDPGVTNVFC 151 (405)
T ss_dssp CSEEEECSCGGGHHHHHHHHHH--HTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHH-HTCEEEECCB--TTTBHHHHHH
T ss_pred CCEEEECCCcccChHHHHHHHH--hCCCEEEecCCCCcccchhhhHHHHHHHHHHHH-hCCEEEEcCC--CCccHHHHHH
Confidence 8999999999999999999999 899999 666632 124556788888844 5888888876 6776665544
Q ss_pred HHHcC-CCCceEEEEEe
Q 017143 149 IVKSG-SIGQVKMVAIR 164 (376)
Q Consensus 149 ~i~~g-~iG~i~~~~~~ 164 (376)
....+ .++++..+.+.
T Consensus 152 ~~~~~~~~~~i~~i~i~ 168 (405)
T 4ina_A 152 AYAQKHYFDEIHEIDIL 168 (405)
T ss_dssp HHHHHHTCSEEEEEEEE
T ss_pred HHHHHhccCcccEEEEE
Confidence 43333 58888888763
No 77
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=99.02 E-value=4.6e-10 Score=102.55 Aligned_cols=100 Identities=22% Similarity=0.244 Sum_probs=72.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHHHHHHHHHhcCCC-------------------CCccC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQQALKLANAFDWP-------------------LKVFP 64 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~~~~~~-------------------~~~~~ 64 (376)
++||||+|+|.+|+.+++.+... ++++|++|.|+ +.+......+....+|.- +.++.
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~--p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred ceEEEEECcCHHHHHHHHHHhCC--CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 58999999999999999999887 89999999995 444222222113333310 01132
Q ss_pred --CHHHHh-hCCCCCEEEEeCCCCccHHHHHHHHcCCCCC-eEEEecCC
Q 017143 65 --GHQELL-DSGLCDVVVVSTPNMTHYQILMDIINHPKPH-HVLVEKPL 109 (376)
Q Consensus 65 --~~~~~l-~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~-~Vl~EKP~ 109 (376)
+.+++. .+.++|+|+.|||...|.+.+.++++ +|. +|++++|.
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~--aGak~VVIs~pa 127 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLK--GGAKKVVISAPS 127 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHH--TTCSEEEESSCC
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHH--cCCCEEEEecCC
Confidence 555552 22359999999999999999999999 665 69999996
No 78
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=98.96 E-value=2.8e-09 Score=97.78 Aligned_cols=90 Identities=17% Similarity=0.211 Sum_probs=71.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC-----------------CHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP-----------------GHQE 68 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~ 68 (376)
|+||||+|+|.+|+.|++.+.++ ++++|++++|++++ .....+.+++++ .|. +.++
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~--p~~elvav~d~~~~---~~~~~a~~~g~~--~~~~~~~~~~~~~~~v~v~~~~e~ 73 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ--PDMKLVGVAKTSPN---YEAFIAHRRGIR--IYVPQQSIKKFEESGIPVAGTVED 73 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECSSCS---HHHHHHHHTTCC--EECCGGGHHHHHTTTCCCCCCHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC--CCCEEEEEEcCChH---HHHHHHHhcCcc--eecCcCHHHHhcccccccccCHhH
Confidence 48999999999999999999888 89999999999876 344555566665 443 3334
Q ss_pred HhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 69 LLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 69 ~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
+++ ++|+|+.|||+..+.+.+..+++ +|..++.-
T Consensus 74 l~~--~vDvV~~aTp~~~s~~~a~~~~~--aG~kvV~~ 107 (340)
T 1b7g_O 74 LIK--TSDIVVDTTPNGVGAQYKPIYLQ--LQRNAIFQ 107 (340)
T ss_dssp HHH--HCSEEEECCSTTHHHHHHHHHHH--TTCEEEEC
T ss_pred hhc--CCCEEEECCCCchhHHHHHHHHH--cCCeEEEe
Confidence 443 48999999999999999999999 77766553
No 79
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.95 E-value=1.6e-09 Score=101.02 Aligned_cols=133 Identities=16% Similarity=0.248 Sum_probs=93.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||+|+|+|.+|+..+..|.+. .+++ ++|++.++++++++.+....+++.-.+++++++++ .|+|+.++|+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~----~~v~-~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~--~DvVi~~~p~ 87 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE----FDVY-IGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKE--FELVIGALPG 87 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT----SEEE-EEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTT--CSEEEECCCG
T ss_pred CccEEEEECCCHHHHHHHHHHhcC----CCeE-EEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhC--CCEEEEecCC
Confidence 468999999999999888777553 4543 67888886555444333333332223455666665 8999999999
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHH--HHHHHHHc
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVA--KLIQIVKS 152 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~--~~k~~i~~ 152 (376)
..|..++..|++ +|+|++- ++...++.++|.+.|++ +|+.++.+. =++|... .++.+++.
T Consensus 88 ~~~~~v~~~~~~--~g~~yvD---~s~~~~~~~~l~~~a~~-~g~~~i~~~--G~~PG~~~~~a~~~~~~ 149 (365)
T 3abi_A 88 FLGFKSIKAAIK--SKVDMVD---VSFMPENPLELRDEAEK-AQVTIVFDA--GFAPGLSNILMGRIFQE 149 (365)
T ss_dssp GGHHHHHHHHHH--HTCEEEE---CCCCSSCGGGGHHHHHH-TTCEEECCC--BTTTBHHHHHHHHHHHH
T ss_pred cccchHHHHHHh--cCcceEe---eeccchhhhhhhhhhcc-CCceeeecC--CCCCchHHHHHHHHHHh
Confidence 999999999999 8999875 44555667778888844 587777654 4666443 45555554
No 80
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=98.95 E-value=1.7e-08 Score=90.70 Aligned_cols=113 Identities=19% Similarity=0.211 Sum_probs=89.6
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
++.+++|+|+ |.+|+.|+..+.+. ++++++.+++... .+ +-+|++ +|+|++++.++.++|+++|++|
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~---g~~~V~~VnP~~~----g~---~i~G~~--vy~sl~el~~~~~~Dv~ii~vp 79 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLEC---GTKIVGGVTPGKG----GQ---NVHGVP--VFDTVKEAVKETDANASVIFVP 79 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHT---TCCEEEEECTTCT----TC---EETTEE--EESSHHHHHHHHCCCEEEECCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC---CCeEEEEeCCCCC----Cc---eECCEe--eeCCHHHHhhcCCCCEEEEccC
Confidence 4688999998 99999999988775 6777766665431 01 125765 9999999998434999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
+..|.+.+.+|++ +|++.++..+-..+.++.++|.++|++ .++.+.
T Consensus 80 ~~~~~~~v~ea~~--~Gi~~vVi~t~G~~~~~~~~l~~~A~~-~gi~vi 125 (294)
T 2yv1_A 80 APFAKDAVFEAID--AGIELIVVITEHIPVHDTMEFVNYAED-VGVKII 125 (294)
T ss_dssp HHHHHHHHHHHHH--TTCSEEEECCSCCCHHHHHHHHHHHHH-HTCEEE
T ss_pred HHHHHHHHHHHHH--CCCCEEEEECCCCCHHHHHHHHHHHHH-cCCEEE
Confidence 9999999999999 899976667767788899999999955 477543
No 81
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.90 E-value=5.4e-08 Score=87.12 Aligned_cols=114 Identities=14% Similarity=0.182 Sum_probs=89.9
Q ss_pred CCceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 4 NDTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 4 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
.+..||+|+|+ |.+|+.|+..+.+. ++++++.+++.... + +.+|++ +|+|++++.+..++|+++|++
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~---g~~~v~~VnP~~~g----~---~i~G~~--vy~sl~el~~~~~~Dv~Ii~v 72 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTY---GTKIVAGVTPGKGG----M---EVLGVP--VYDTVKEAVAHHEVDASIIFV 72 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCTT----C---EETTEE--EESSHHHHHHHSCCSEEEECC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHc---CCeEEEEECCCCCC----c---eECCEE--eeCCHHHHhhcCCCCEEEEec
Confidence 35689999998 99999999988776 68887777765410 0 135765 999999999844599999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
|+..+.+.+.+|++ +|.+.++.-.-..+.++.++|.+.+++ .++.+.
T Consensus 73 p~~~~~~~~~ea~~--~Gi~~vVi~t~G~~~~~~~~l~~~a~~-~gi~vi 119 (288)
T 1oi7_A 73 PAPAAADAALEAAH--AGIPLIVLITEGIPTLDMVRAVEEIKA-LGSRLI 119 (288)
T ss_dssp CHHHHHHHHHHHHH--TTCSEEEECCSCCCHHHHHHHHHHHHH-HTCEEE
T ss_pred CHHHHHHHHHHHHH--CCCCEEEEECCCCCHHHHHHHHHHHHH-cCCEEE
Confidence 99999999999999 889855555556678888999999955 477433
No 82
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=98.81 E-value=1.2e-08 Score=93.49 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=72.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC------------------CCccCCHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP------------------LKVFPGHQ 67 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ 67 (376)
|+||||+|+|.+|+.+++.+... ++++|++|+|.+++. ...+.+..|.. ..+-.+.+
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~--~~~evvaV~d~~~~~---~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~ 76 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQ--DDMEVIGVTKTKPDF---EARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTIL 76 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEEESSCSH---HHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecCCHHH---HHHHHHhcCCccccccCCCceeecccCCeEEECCchH
Confidence 48999999999999999999877 889999999987653 33333222211 01122344
Q ss_pred HHhhCCCCCEEEEeCCCCccHHHHH-HHHcCCCCCeEEEecCCC
Q 017143 68 ELLDSGLCDVVVVSTPNMTHYQILM-DIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 68 ~~l~~~~~D~V~i~t~~~~h~~~~~-~al~~~~g~~Vl~EKP~a 110 (376)
+++. ++|+|+.|||...|.+.+. .+++ +|++|++.+|..
T Consensus 77 ~~~~--~vDiV~eatg~~~s~~~a~~~~l~--aG~~VI~sap~~ 116 (343)
T 2yyy_A 77 DIIE--DADIVVDGAPKKIGKQNLENIYKP--HKVKAILQGGEK 116 (343)
T ss_dssp GTGG--GCSEEEECCCTTHHHHHHHHTTTT--TTCEEEECTTSC
T ss_pred Hhcc--CCCEEEECCCccccHHHHHHHHHH--CCCEEEECCCcc
Confidence 4444 4999999999999999996 8999 889999999963
No 83
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=98.79 E-value=2.2e-07 Score=83.47 Aligned_cols=112 Identities=19% Similarity=0.213 Sum_probs=85.7
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCC-CCCEEEEeC
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSG-LCDVVVVST 82 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~D~V~i~t 82 (376)
++.+++|+|+ |.+|+.|+..+.+. ++++++.+++... .+ +-+|++ +|+|++++.+.. ++|+++|++
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~---g~~~v~~VnP~~~----g~---~i~G~~--vy~sl~el~~~~~~~DvaIi~v 79 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEY---GTKVVAGVTPGKG----GS---EVHGVP--VYDSVKEALAEHPEINTSIVFV 79 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCT----TC---EETTEE--EESSHHHHHHHCTTCCEEEECC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhC---CCcEEEEeCCCCC----Cc---eECCEe--eeCCHHHHhhcCCCCCEEEEec
Confidence 4688999997 89999999988876 6777766665431 00 125765 999999999743 399999999
Q ss_pred CCCccHHHHHHHHcCCCCCe-EEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 83 PNMTHYQILMDIINHPKPHH-VLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~-Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
|+..+.+.+.+|++ +|++ ++| -.-..+.++.++|.+++++ .++.+.
T Consensus 80 p~~~~~~~v~ea~~--~Gi~~vVi-~t~G~~~~~~~~l~~~A~~-~gi~vi 126 (297)
T 2yv2_A 80 PAPFAPDAVYEAVD--AGIRLVVV-ITEGIPVHDTMRFVNYARQ-KGATII 126 (297)
T ss_dssp CGGGHHHHHHHHHH--TTCSEEEE-CCCCCCHHHHHHHHHHHHH-HTCEEE
T ss_pred CHHHHHHHHHHHHH--CCCCEEEE-ECCCCCHHHHHHHHHHHHH-cCCEEE
Confidence 99999999999999 8888 444 2324467888999999955 477543
No 84
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.78 E-value=3.9e-08 Score=94.09 Aligned_cols=145 Identities=15% Similarity=0.116 Sum_probs=102.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--CccC---CHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVFP---GHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~l~~~~~D~V~ 79 (376)
++.||.|+|+|.+|+.++..|.+. ++++ +.|++|+++ ++++++++.++.. --+. ++++++.. +|+|+
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~--~g~~-V~v~~R~~~---ka~~la~~~~~~~~~~D~~d~~~l~~~l~~--~DvVI 93 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAAN--DDIN-VTVACRTLA---NAQALAKPSGSKAISLDVTDDSALDKVLAD--NDVVI 93 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTS--TTEE-EEEEESSHH---HHHHHHGGGTCEEEECCTTCHHHHHHHHHT--SSEEE
T ss_pred CCCEEEEECChHHHHHHHHHHHhC--CCCe-EEEEECCHH---HHHHHHHhcCCcEEEEecCCHHHHHHHHcC--CCEEE
Confidence 356899999999999999999886 5777 557899887 5666665544321 0122 45566664 89999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcC-CC-Cc
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSG-SI-GQ 157 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g-~i-G~ 157 (376)
.++|...|..++..|++ +|+|++.. +....+..+|.+.|++ .|+.++.++...-......++++++.+ .+ |+
T Consensus 94 n~tp~~~~~~v~~a~l~--~g~~vvd~---~~~~p~~~~Ll~~Ak~-aGv~~i~g~G~~PG~~~~~a~~li~q~~~~g~~ 167 (467)
T 2axq_A 94 SLIPYTFHPNVVKSAIR--TKTDVVTS---SYISPALRELEPEIVK-AGITVMNEIGLDPGIDHLYAVKTIDEVHRAGGK 167 (467)
T ss_dssp ECSCGGGHHHHHHHHHH--HTCEEEEC---SCCCHHHHHHHHHHHH-HTCEEECSCBBTTBHHHHHHHHHHHHHHHTTCE
T ss_pred ECCchhhhHHHHHHHHh--cCCEEEEe---ecCCHHHHHHHHHHHH-cCCEEEecCCcCccchHHHHHHHHHHHHhccCc
Confidence 99999999889999999 88999973 3334456888888855 488888887664444455566666543 23 56
Q ss_pred eEEEEE
Q 017143 158 VKMVAI 163 (376)
Q Consensus 158 i~~~~~ 163 (376)
+..+..
T Consensus 168 ~~s~~~ 173 (467)
T 2axq_A 168 LKSFLS 173 (467)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 666554
No 85
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.78 E-value=8.8e-09 Score=81.74 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=80.4
Q ss_pred CceeEEEEeC----ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 5 DTVKYGIIGM----GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~----G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
++.+|+|||+ |.+|..++..+.+. +++++ .++++.+ + -.|.+ .|.|++++.+. +|+|+|
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~---G~~V~-~vnp~~~------~---i~G~~--~~~s~~el~~~--vDlvii 75 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK---GFEVL-PVNPNYD------E---IEGLK--CYRSVRELPKD--VDVIVF 75 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT---TCEEE-EECTTCS------E---ETTEE--CBSSGGGSCTT--CCEEEE
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC---CCEEE-EeCCCCC------e---ECCee--ecCCHHHhCCC--CCEEEE
Confidence 4689999999 99999999988775 77744 3444432 1 14755 99999999875 999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
++|+..+.+++.++++ +|...++..+.+. .++|.+.+++. |+.+.
T Consensus 76 ~vp~~~v~~v~~~~~~--~g~~~i~~~~~~~----~~~l~~~a~~~-Gi~~i 120 (138)
T 1y81_A 76 VVPPKVGLQVAKEAVE--AGFKKLWFQPGAE----SEEIRRFLEKA-GVEYS 120 (138)
T ss_dssp CSCHHHHHHHHHHHHH--TTCCEEEECTTSC----CHHHHHHHHHH-TCEEE
T ss_pred EeCHHHHHHHHHHHHH--cCCCEEEEcCccH----HHHHHHHHHHC-CCEEE
Confidence 9999999999999999 7777788777553 67888888554 77654
No 86
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.73 E-value=1.5e-08 Score=92.41 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=78.4
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC---CCCCccCCHHHHhhCCCCCEEEEe
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD---WPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+..+++|||+|.+|+.|+.++... .+++.+.|++++++ ++++++++++ +++. ++++++++ + .|+|++|
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~--~~~~~V~v~~r~~~---~a~~la~~~~~~~~~~~-~~~~~e~v-~--aDvVi~a 194 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRV--FDIGEVKAYDVREK---AAKKFVSYCEDRGISAS-VQPAEEAS-R--CDVLVTT 194 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH--SCCCEEEEECSSHH---HHHHHHHHHHHTTCCEE-ECCHHHHT-S--SSEEEEC
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHh--CCccEEEEECCCHH---HHHHHHHHHHhcCceEE-ECCHHHHh-C--CCEEEEe
Confidence 357999999999999999999887 46788889999998 5666666543 4445 89999999 5 8999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHH
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADC 116 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~ 116 (376)
||...+. +-...++ .|+||+++++......|+
T Consensus 195 Tp~~~pv-~~~~~l~--~G~~V~~ig~~~p~~~el 226 (322)
T 1omo_A 195 TPSRKPV-VKAEWVE--EGTHINAIGADGPGKQEL 226 (322)
T ss_dssp CCCSSCC-BCGGGCC--TTCEEEECSCCSTTCCCB
T ss_pred eCCCCce-ecHHHcC--CCeEEEECCCCCCCcccc
Confidence 9976432 1135788 899999998877765554
No 87
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.68 E-value=3e-08 Score=85.49 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=68.2
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||+|||+|.+|..++..+.+. +.+++.+++++++ +++++++++|+. .+.+..+.+++ .|+|++++|+
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~---g~~V~~v~~r~~~---~~~~l~~~~g~~--~~~~~~~~~~~--aDvVilavp~ 91 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAA---QIPAIIANSRGPA---SLSSVTDRFGAS--VKAVELKDALQ--ADVVILAVPY 91 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHT---TCCEEEECTTCGG---GGHHHHHHHTTT--EEECCHHHHTT--SSEEEEESCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC---CCEEEEEECCCHH---HHHHHHHHhCCC--cccChHHHHhc--CCEEEEeCCh
Confidence 468999999999999999988875 6788877999998 566677777865 44444455654 8999999999
Q ss_pred CccHHHHHHHHcCCCCCe-EEEecCC
Q 017143 85 MTHYQILMDIINHPKPHH-VLVEKPL 109 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~-Vl~EKP~ 109 (376)
..+.+++.+... ..++. |-+-+|+
T Consensus 92 ~~~~~v~~~l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 92 DSIADIVTQVSD-WGGQIVVDASNAI 116 (220)
T ss_dssp GGHHHHHTTCSC-CTTCEEEECCCCB
T ss_pred HHHHHHHHHhhc-cCCCEEEEcCCCC
Confidence 888877765422 12332 3345555
No 88
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.67 E-value=6.6e-07 Score=80.64 Aligned_cols=115 Identities=17% Similarity=0.150 Sum_probs=91.0
Q ss_pred ceeEEEE-eC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGII-GM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~ii-G~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
+-+++|| |+ |..|+.|+..+.+. ++++++.+++.... .+-+|++ +|.+++++.+...+|+++|++|
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~---G~~~v~~VnP~~~g-------~~i~G~~--vy~sl~el~~~~~vD~avI~vP 80 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEY---GTNLVGGTTPGKGG-------KTHLGLP--VFNTVKEAKEQTGATASVIYVP 80 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECTTCTT-------CEETTEE--EESSHHHHHHHHCCCEEEECCC
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHC---CCcEEEEeCCCcCc-------ceECCee--eechHHHhhhcCCCCEEEEecC
Confidence 4568888 98 99999999988876 68877666665310 0135765 9999999998434999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCC-CeEEEEeec
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRP-DILVQVGLE 136 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~-~~~~~v~~~ 136 (376)
+..+.+.+.+|++ +|.+.++......+.++.+++.+.+ +++ |+.+ +|.+
T Consensus 81 ~~~~~~~~~e~i~--~Gi~~iv~~t~G~~~~~~~~l~~~a-~~~~gi~l-iGPn 130 (305)
T 2fp4_A 81 PPFAAAAINEAID--AEVPLVVCITEGIPQQDMVRVKHRL-LRQGKTRL-IGPN 130 (305)
T ss_dssp HHHHHHHHHHHHH--TTCSEEEECCCCCCHHHHHHHHHHH-TTCSSCEE-ECSS
T ss_pred HHHHHHHHHHHHH--CCCCEEEEECCCCChHHHHHHHHHH-HhcCCcEE-EeCC
Confidence 9999999999999 8888877777778888889999999 666 7664 5433
No 89
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.67 E-value=2e-08 Score=92.50 Aligned_cols=102 Identities=16% Similarity=0.245 Sum_probs=79.2
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc----CCCCCccCCHHHHhhCCCCCEEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF----DWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
+..+++|||+|.+|+.|+.++... .+++-+.|++++++ +++++++++ |+++..++++++++.+ .|+|++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~--~~~~~V~V~~r~~~---~a~~la~~~~~~~g~~~~~~~~~~eav~~--aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKH--LGIEEIVAYDTDPL---ATAKLIANLKEYSGLTIRRASSVAEAVKG--VDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHH--SCCCEEEEECSSHH---HHHHHHHHHTTCTTCEEEECSSHHHHHTT--CSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHh--CCCcEEEEEcCCHH---HHHHHHHHHHhccCceEEEeCCHHHHHhc--CCEEEE
Confidence 346899999999999999988776 46777889999998 566676665 5433568899999976 899999
Q ss_pred eCCCCccHHHH-HHHHcCCCCCeEEEecCCCCCHHH
Q 017143 81 STPNMTHYQIL-MDIINHPKPHHVLVEKPLCTTVAD 115 (376)
Q Consensus 81 ~t~~~~h~~~~-~~al~~~~g~~Vl~EKP~a~~~~e 115 (376)
|||...|.+++ ...++ .|+||.+.........|
T Consensus 201 aTps~~~~pvl~~~~l~--~G~~V~~vgs~~p~~~E 234 (350)
T 1x7d_A 201 VTADKAYATIITPDMLE--PGMHLNAVGGDCPGKTE 234 (350)
T ss_dssp CCCCSSEEEEECGGGCC--TTCEEEECSCCBTTBEE
T ss_pred eccCCCCCceecHHHcC--CCCEEEECCCCCCCcee
Confidence 99987554433 35788 89999999776555333
No 90
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.65 E-value=1.8e-07 Score=84.64 Aligned_cols=111 Identities=21% Similarity=0.305 Sum_probs=79.7
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||+|||+|.+|..+...+... +.+|+ ++|++++ +++++.++ |+ ..++++++++.+ .|+|++++|.
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~---g~~V~-~~~~~~~---~~~~~~~~-g~--~~~~~~~~~~~~--~D~vi~~vp~ 70 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKE---GVTVY-AFDLMEA---NVAAVVAQ-GA--QACENNQKVAAA--SDIIFTSLPN 70 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHT---TCEEE-EECSSHH---HHHHHHTT-TC--EECSSHHHHHHH--CSEEEECCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHC---CCeEE-EEeCCHH---HHHHHHHC-CC--eecCCHHHHHhC--CCEEEEECCC
Confidence 368999999999999999888775 67765 7899987 44455443 64 477899999886 8999999998
Q ss_pred CccHHHHHH-------HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 85 MTHYQILMD-------IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 85 ~~h~~~~~~-------al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
..|.+.+.. .++ .|+.|+ ..- +......++|.+...+. ++.++
T Consensus 71 ~~~~~~v~~~~~~l~~~l~--~~~~vv-~~~-~~~~~~~~~l~~~~~~~-g~~~~ 120 (301)
T 3cky_A 71 AGIVETVMNGPGGVLSACK--AGTVIV-DMS-SVSPSSTLKMAKVAAEK-GIDYV 120 (301)
T ss_dssp HHHHHHHHHSTTCHHHHSC--TTCEEE-ECC-CCCHHHHHHHHHHHHHT-TCEEE
T ss_pred HHHHHHHHcCcchHhhcCC--CCCEEE-ECC-CCCHHHHHHHHHHHHHc-CCeEE
Confidence 887766552 455 566554 432 33456677788877443 65554
No 91
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.65 E-value=1.7e-08 Score=80.97 Aligned_cols=87 Identities=15% Similarity=0.209 Sum_probs=67.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|+|||+|.+|..++..+... +++ +.+++++++ ++++++++++.....++++++++.. .|+|+.+||..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~---g~~-v~v~~r~~~---~~~~~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP---QYK-VTVAGRNID---HVRAFAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT---TCE-EEEEESCHH---HHHHHHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCE-EEEEcCCHH---HHHHHHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 36899999999999998887764 788 779999988 6777888888654467899999986 89999999976
Q ss_pred ccHHHHHHHHcCCCCCeEE
Q 017143 86 THYQILMDIINHPKPHHVL 104 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl 104 (376)
. ..+....++ .|++|+
T Consensus 92 ~-~~~~~~~l~--~g~~vi 107 (144)
T 3oj0_A 92 T-PIVEERSLM--PGKLFI 107 (144)
T ss_dssp S-CSBCGGGCC--TTCEEE
T ss_pred C-cEeeHHHcC--CCCEEE
Confidence 3 233346677 666654
No 92
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.61 E-value=2.7e-08 Score=79.69 Aligned_cols=113 Identities=12% Similarity=0.107 Sum_probs=81.3
Q ss_pred ceeEEEEeC----ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIGM----GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~----G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+.+|+|||+ |.+|..++..+.+. +++++ .++++.. .++ -.|++ .|.|++++.+. +|+|+|+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~---G~~v~-~vnp~~~----g~~---i~G~~--~~~sl~el~~~--~Dlvii~ 77 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQ---GYHVI-PVSPKVA----GKT---LLGQQ--GYATLADVPEK--VDMVDVF 77 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHH---TCCEE-EECSSST----TSE---ETTEE--CCSSTTTCSSC--CSEEECC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHC---CCEEE-EeCCccc----ccc---cCCee--ccCCHHHcCCC--CCEEEEE
Confidence 578999999 78999998888776 67733 3455431 011 14754 99999998764 8999999
Q ss_pred CCCCccHHHHHHHHcCCCC-CeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE-EeeccccCH
Q 017143 82 TPNMTHYQILMDIINHPKP-HHVLVEKPLCTTVADCKKVVDAARKRPDILVQ-VGLEYRYMP 141 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g-~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~-v~~~~r~~p 141 (376)
+|+..+.+++.++++ .| +.|+++. .+. .++|.+.+ ++.|+.+. .++.....|
T Consensus 78 vp~~~v~~v~~~~~~--~g~~~i~i~~-~~~----~~~l~~~a-~~~Gi~~igpnc~g~~~~ 131 (145)
T 2duw_A 78 RNSEAAWGVAQEAIA--IGAKTLWLQL-GVI----NEQAAVLA-REAGLSVVMDRCPAIELP 131 (145)
T ss_dssp SCSTHHHHHHHHHHH--HTCCEEECCT-TCC----CHHHHHHH-HTTTCEEECSCCHHHHST
T ss_pred eCHHHHHHHHHHHHH--cCCCEEEEcC-ChH----HHHHHHHH-HHcCCEEEcCCeeeEEcc
Confidence 999999999999988 45 7788883 222 67889999 45577665 444444444
No 93
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.61 E-value=2.6e-07 Score=82.95 Aligned_cols=109 Identities=22% Similarity=0.242 Sum_probs=81.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
+||+|||+|.||..+...+.+. +.+|+ ++|+++++ ++++.+ .|+ ..++++++++++ .|+|++|+|+..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~---G~~V~-~~dr~~~~---~~~~~~-~g~--~~~~~~~~~~~~--aDvvi~~vp~~~ 69 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA---GCSVT-IWNRSPEK---AEELAA-LGA--ERAATPCEVVES--CPVTFAMLADPA 69 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSGGG---GHHHHH-TTC--EECSSHHHHHHH--CSEEEECCSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC---CCeEE-EEcCCHHH---HHHHHH-CCC--eecCCHHHHHhc--CCEEEEEcCCHH
Confidence 6899999999999999888875 67866 78999984 444433 364 478999999987 799999999766
Q ss_pred cHHHHH-------HHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 87 HYQILM-------DIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 87 h~~~~~-------~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
+.+.+. ..++ .|+.| +.. -+.++...+++.+...+. ++.+.
T Consensus 70 ~~~~v~~~~~~l~~~l~--~~~~v-i~~-st~~~~~~~~~~~~~~~~-g~~~~ 117 (287)
T 3pef_A 70 AAEEVCFGKHGVLEGIG--EGRGY-VDM-STVDPATSQRIGVAVVAK-GGRFL 117 (287)
T ss_dssp HHHHHHHSTTCHHHHCC--TTCEE-EEC-SCCCHHHHHHHHHHHHHT-TCEEE
T ss_pred HHHHHHcCcchHhhcCC--CCCEE-EeC-CCCCHHHHHHHHHHHHHh-CCEEE
Confidence 555444 4566 66555 444 466888999999888554 65543
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.61 E-value=9e-08 Score=85.01 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=66.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.+|..+...+... +.+++.++|++++ +++++.+++|+. .++++++++++ .|+|++++|+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~---g~~~v~~~~~~~~---~~~~~~~~~g~~--~~~~~~~~~~~--~Dvvi~av~~~ 79 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK---GFRIVQVYSRTEE---SARELAQKVEAE--YTTDLAEVNPY--AKLYIVSLKDS 79 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSHH---HHHHHHHHTTCE--EESCGGGSCSC--CSEEEECCCHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC---CCeEEEEEeCCHH---HHHHHHHHcCCc--eeCCHHHHhcC--CCEEEEecCHH
Confidence 57999999999999999888876 5777889999988 566677777864 78889888865 89999999999
Q ss_pred ccHHHHHHHHc
Q 017143 86 THYQILMDIIN 96 (376)
Q Consensus 86 ~h~~~~~~al~ 96 (376)
.|.+++.+..+
T Consensus 80 ~~~~v~~~l~~ 90 (266)
T 3d1l_A 80 AFAELLQGIVE 90 (266)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 88777665543
No 95
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=98.61 E-value=3.7e-08 Score=90.88 Aligned_cols=91 Identities=20% Similarity=0.314 Sum_probs=66.3
Q ss_pred CCceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC-----------CCCccC--CHHHH
Q 017143 4 NDTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW-----------PLKVFP--GHQEL 69 (376)
Q Consensus 4 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~-----------~~~~~~--~~~~~ 69 (376)
++++||||+| +|.+|+.+++.|..+ ++++|+++++.+.. ..+.+.+.|+. + ..+. +.++
T Consensus 2 ~~~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~s~~~---~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~- 74 (350)
T 2ep5_A 2 ADKIKVSLLGSTGMVGQKMVKMLAKH--PYLELVKVSASPSK---IGKKYKDAVKWIEQGDIPEEVQD-LPIVSTNYED- 74 (350)
T ss_dssp CCCEEEEEESCSSHHHHHHHHHHTTC--SSEEEEEEECCGGG---TTSBHHHHCCCCSSSSCCHHHHT-CBEECSSGGG-
T ss_pred CCCcEEEEECcCCHHHHHHHHHHHhC--CCcEEEEEecChhh---cCCCHHHhcCcccccccccCCce-eEEeeCCHHH-
Confidence 3469999999 899999999999888 89999999843222 12223333321 1 1122 2333
Q ss_pred hhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEE
Q 017143 70 LDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~ 105 (376)
+. ++|+|+.|+|+..|.+++.++++ +|++|+.
T Consensus 75 ~~--~vDvVf~atp~~~s~~~a~~~~~--aG~~VId 106 (350)
T 2ep5_A 75 HK--DVDVVLSALPNELAESIELELVK--NGKIVVS 106 (350)
T ss_dssp GT--TCSEEEECCCHHHHHHHHHHHHH--TTCEEEE
T ss_pred hc--CCCEEEECCChHHHHHHHHHHHH--CCCEEEE
Confidence 33 59999999999999999999999 8899776
No 96
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.61 E-value=7.3e-08 Score=77.09 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=78.1
Q ss_pred ceeEEEEeC----ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIGM----GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~----G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+.+|+|||+ |.+|..++..+.+. +++++. .++.. + +-.|++ +|.|++++.+. +|+|+|+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~---G~~v~~---Vnp~~----~---~i~G~~--~y~sl~~l~~~--vDlvvi~ 84 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEH---GYDVYP---VNPKY----E---EVLGRK--CYPSVLDIPDK--IEVVDLF 84 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT---TCEEEE---ECTTC----S---EETTEE--CBSSGGGCSSC--CSEEEEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHC---CCEEEE---ECCCC----C---eECCee--ccCCHHHcCCC--CCEEEEE
Confidence 578999999 68899998888775 777444 34431 1 124755 99999998764 9999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
+|+..+.+++.+|++ +|...++-.+... .+++.+.+++ +|+.+.
T Consensus 85 vp~~~~~~vv~~~~~--~gi~~i~~~~g~~----~~~l~~~a~~-~Gi~vv 128 (144)
T 2d59_A 85 VKPKLTMEYVEQAIK--KGAKVVWFQYNTY----NREASKKADE-AGLIIV 128 (144)
T ss_dssp SCHHHHHHHHHHHHH--HTCSEEEECTTCC----CHHHHHHHHH-TTCEEE
T ss_pred eCHHHHHHHHHHHHH--cCCCEEEECCCch----HHHHHHHHHH-cCCEEE
Confidence 999999999999999 6777777666553 5788888955 477743
No 97
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.58 E-value=5.3e-07 Score=82.25 Aligned_cols=112 Identities=15% Similarity=0.108 Sum_probs=82.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||+|||+|.+|......+.+. +.+|+ ++|++++ +++++.+. |+ ..++++++++++ .|+|++++|+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~---G~~V~-~~dr~~~---~~~~l~~~-g~--~~~~~~~e~~~~--aDvVi~~vp~ 97 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA---GYALQ-VWNRTPA---RAASLAAL-GA--TIHEQARAAARD--ADIVVSMLEN 97 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT---TCEEE-EECSCHH---HHHHHHTT-TC--EEESSHHHHHTT--CSEEEECCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhC---CCeEE-EEcCCHH---HHHHHHHC-CC--EeeCCHHHHHhc--CCEEEEECCC
Confidence 457999999999999998888875 77865 6899988 45555544 64 478999999987 8999999998
Q ss_pred CccHHHHHH------HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 017143 85 MTHYQILMD------IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQV 133 (376)
Q Consensus 85 ~~h~~~~~~------al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v 133 (376)
..+.+.+.. .+. .|+ +++..- +.++...+++.+...+. ++.+.-
T Consensus 98 ~~~~~~v~~~~~~~~~l~--~~~-~vi~~s-t~~~~~~~~~~~~~~~~-g~~~~~ 147 (320)
T 4dll_A 98 GAVVQDVLFAQGVAAAMK--PGS-LFLDMA-SITPREARDHAARLGAL-GIAHLD 147 (320)
T ss_dssp HHHHHHHHTTTCHHHHCC--TTC-EEEECS-CCCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHcchhHHhhCC--CCC-EEEecC-CCCHHHHHHHHHHHHHc-CCEEEe
Confidence 766655542 345 554 445443 45788888888888554 655443
No 98
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.58 E-value=6.5e-07 Score=81.38 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=78.5
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh--hhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL--QSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+.++||+|||+|.||......|.+. +.+-+.++|+++ + +.+. ..+.|+ ..+++.++++++ .|+|+++
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~---G~~~V~~~dr~~~~~---~~~~-~~~~g~--~~~~~~~e~~~~--aDvVi~~ 90 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQA---GAIDMAAYDAASAES---WRPR-AEELGV--SCKASVAEVAGE--CDVIFSL 90 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHH---SCCEEEEECSSCHHH---HHHH-HHHTTC--EECSCHHHHHHH--CSEEEEC
T ss_pred CCCCEEEEECccHHHHHHHHHHHHC---CCCeEEEEcCCCCHH---HHHH-HHHCCC--EEeCCHHHHHhc--CCEEEEe
Confidence 3468999999999999999988886 562344789973 4 2333 335575 478899999987 8999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARK 125 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~ 125 (376)
+|+..+.+.+...+..-....+++..- +..+...+++.+...+
T Consensus 91 vp~~~~~~~~~~l~~~l~~~~ivvd~s-t~~~~~~~~~~~~~~~ 133 (312)
T 3qsg_A 91 VTAQAALEVAQQAGPHLCEGALYADFT-SCSPAVKRAIGDVISR 133 (312)
T ss_dssp SCTTTHHHHHHHHGGGCCTTCEEEECC-CCCHHHHHHHHHHHHH
T ss_pred cCchhHHHHHHhhHhhcCCCCEEEEcC-CCCHHHHHHHHHHHHh
Confidence 999998887766544211235777665 5677888888877743
No 99
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=98.57 E-value=1.2e-07 Score=82.11 Aligned_cols=129 Identities=16% Similarity=0.075 Sum_probs=97.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
.+||+++|+|.+|+..+.. . +++++++++ + ++. ++|+ ..++|++++++ ++|+|+-|.++.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~-----~-~leLv~v~~---~---k~g----elgv--~a~~d~d~lla--~pD~VVe~A~~~ 71 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL-----G-NFEKIYAYD---R---ISK----DIPG--VVRLDEFQVPS--DVSTVVECASPE 71 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH-----S-CCSEEEEEC---S---SCC----CCSS--SEECSSCCCCT--TCCEEEECSCHH
T ss_pred cceEEEECcCHHHHHHHhc-----C-CcEEEEEEe---c---ccc----ccCc--eeeCCHHHHhh--CCCEEEECCCHH
Confidence 5899999999999987665 2 899999998 3 222 2254 47899999995 599999999887
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCC-CHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEEEEe
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCT-TVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMVAIR 164 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~-~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~~~~ 164 (376)
.=.+++.++|+ +|++|++=-+.++ +.+-.++|.++| +++|..+++..---.. ...+ .... |.|..+.+.
T Consensus 72 av~e~~~~iL~--aG~dvv~~S~gaLad~~l~~~L~~aA-~~gg~~l~vpSGAi~G--lD~l-~aa~----g~l~~V~~~ 141 (253)
T 1j5p_A 72 AVKEYSLQILK--NPVNYIIISTSAFADEVFRERFFSEL-KNSPARVFFPSGAIGG--LDVL-SSIK----DFVKNVRIE 141 (253)
T ss_dssp HHHHHHHHHTT--SSSEEEECCGGGGGSHHHHHHHHHHH-HTCSCEEECCCTTCCC--HHHH-HHHG----GGEEEEEEE
T ss_pred HHHHHHHHHHH--CCCCEEEcChhhhcCHHHHHHHHHHH-HHCCCeEEecCCcccc--hhHH-HHhc----CCccEEEEE
Confidence 77778999999 9999999888665 555568888888 6778888765444333 4443 2222 778777775
No 100
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.57 E-value=3.3e-07 Score=81.91 Aligned_cols=100 Identities=15% Similarity=0.188 Sum_probs=71.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCc---EEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGV---SVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~---~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+++||+|||+|.||..++..+.+. ++ + +.++|++++ +++++.+++|+. .+++..+++++ .|+|+++
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~---g~~~~~-V~v~dr~~~---~~~~l~~~~gi~--~~~~~~~~~~~--aDvVila 70 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIAN---GYDPNR-ICVTNRSLD---KLDFFKEKCGVH--TTQDNRQGALN--ADVVVLA 70 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHT---TCCGGG-EEEECSSSH---HHHHHHHTTCCE--EESCHHHHHSS--CSEEEEC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC---CCCCCe-EEEEeCCHH---HHHHHHHHcCCE--EeCChHHHHhc--CCeEEEE
Confidence 357999999999999999888875 33 4 458999998 566777778864 78899999876 8999999
Q ss_pred CCCCccHHHHHHHHcC-CCCCeEEEecCCCCCHHH
Q 017143 82 TPNMTHYQILMDIINH-PKPHHVLVEKPLCTTVAD 115 (376)
Q Consensus 82 t~~~~h~~~~~~al~~-~~g~~Vl~EKP~a~~~~e 115 (376)
+|++...+++.+.... -.++++++--=-+.+.+.
T Consensus 71 v~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~ 105 (280)
T 3tri_A 71 VKPHQIKMVCEELKDILSETKILVISLAVGVTTPL 105 (280)
T ss_dssp SCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHH
T ss_pred eCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHHH
Confidence 9987766665544221 023445553223344444
No 101
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.56 E-value=6.7e-07 Score=68.48 Aligned_cols=106 Identities=20% Similarity=0.145 Sum_probs=78.6
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--Ccc---CCHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVF---PGHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~l~~~~~D~V~ 79 (376)
++.+|+|+|+|.+|...+..+... ...+++ ++++++++ .+.+. ..++.. .-. +++++++. ++|+|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~-~~~r~~~~---~~~~~-~~~~~~~~~d~~~~~~~~~~~~--~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS--SNYSVT-VADHDLAA---LAVLN-RMGVATKQVDAKDEAGLAKALG--GFDAVI 74 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC--SSEEEE-EEESCHHH---HHHHH-TTTCEEEECCTTCHHHHHHHTT--TCSEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC--CCceEE-EEeCCHHH---HHHHH-hCCCcEEEecCCCHHHHHHHHc--CCCEEE
Confidence 357999999999999998888876 337755 67888874 33433 334321 112 23445554 499999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAAR 124 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~ 124 (376)
.++|...+..++..+++ .|++++. ++.+.+..+++.++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~--~g~~~~~---~~~~~~~~~~~~~~~~ 114 (118)
T 3ic5_A 75 SAAPFFLTPIIAKAAKA--AGAHYFD---LTEDVAATNAVRALVE 114 (118)
T ss_dssp ECSCGGGHHHHHHHHHH--TTCEEEC---CCSCHHHHHHHHHHHH
T ss_pred ECCCchhhHHHHHHHHH--hCCCEEE---ecCcHHHHHHHHHHHH
Confidence 99999999999999999 8888874 7788899999988883
No 102
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.55 E-value=8.2e-07 Score=82.00 Aligned_cols=114 Identities=17% Similarity=0.192 Sum_probs=81.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhC-CCCCEEEEeCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDS-GLCDVVVVSTP 83 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~D~V~i~t~ 83 (376)
+++||+|||+|.||..+...|.+. +.+|+ ++|++++ +++++.+ .|+ ..+++++++++. ..+|+|++++|
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~---G~~V~-v~dr~~~---~~~~l~~-~g~--~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKG---GHECV-VYDLNVN---AVQALER-EGI--AGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHH---HHHHHHT-TTC--BCCSSHHHHHHHSCSSCEEEECSC
T ss_pred cCCEEEEECchHHHHHHHHHHHhC---CCEEE-EEeCCHH---HHHHHHH-CCC--EEeCCHHHHHhcCCCCCEEEEeCC
Confidence 458999999999999999988885 67765 7899988 4555543 364 478899999886 34699999999
Q ss_pred CCccHHHHHHHHc-CC-CCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 84 NMTHYQILMDIIN-HP-KPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 84 ~~~h~~~~~~al~-~~-~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
+. +.+-+...+. .- .| .+++.. -+......+++.+.+.++ ++.+.
T Consensus 91 ~~-~v~~vl~~l~~~l~~g-~iiId~-st~~~~~~~~~~~~l~~~-g~~~v 137 (358)
T 4e21_A 91 AA-VVDSMLQRMTPLLAAN-DIVIDG-GNSHYQDDIRRADQMRAQ-GITYV 137 (358)
T ss_dssp GG-GHHHHHHHHGGGCCTT-CEEEEC-SSCCHHHHHHHHHHHHTT-TCEEE
T ss_pred HH-HHHHHHHHHHhhCCCC-CEEEeC-CCCChHHHHHHHHHHHHC-CCEEE
Confidence 99 6555444432 10 23 466654 355778888888888444 66543
No 103
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.53 E-value=8.6e-07 Score=80.01 Aligned_cols=110 Identities=22% Similarity=0.383 Sum_probs=79.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.+|..+...+... +.+| .++|+++++ ++++.++ |+ ..++++++++++ .|+|++++|+.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~---g~~V-~~~~~~~~~---~~~~~~~-g~--~~~~~~~~~~~~--~D~vi~~v~~~ 72 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA---GYSL-VVSDRNPEA---IADVIAA-GA--ETASTAKAIAEQ--CDVIITMLPNS 72 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT---TCEE-EEECSCHHH---HHHHHHT-TC--EECSSHHHHHHH--CSEEEECCSSH
T ss_pred cceEEEECchHHHHHHHHHHHhC---CCEE-EEEeCCHHH---HHHHHHC-CC--eecCCHHHHHhC--CCEEEEECCCH
Confidence 36999999999999999888775 6775 578999874 4444433 65 477899999876 89999999988
Q ss_pred ccHHHHH-------HHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 86 THYQILM-------DIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 86 ~h~~~~~-------~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
.|.+.+. ..++ .|+ +++..- +......++|.+...+ .++.+.
T Consensus 73 ~~~~~~~~~~~~l~~~l~--~~~-~vv~~s-~~~~~~~~~l~~~~~~-~g~~~~ 121 (299)
T 1vpd_A 73 PHVKEVALGENGIIEGAK--PGT-VLIDMS-SIAPLASREISDALKA-KGVEML 121 (299)
T ss_dssp HHHHHHHHSTTCHHHHCC--TTC-EEEECS-CCCHHHHHHHHHHHHT-TTCEEE
T ss_pred HHHHHHHhCcchHhhcCC--CCC-EEEECC-CCCHHHHHHHHHHHHH-cCCeEE
Confidence 7766555 3455 565 456653 4455667788887744 365443
No 104
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.53 E-value=3.4e-07 Score=82.50 Aligned_cols=109 Identities=16% Similarity=0.219 Sum_probs=78.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.+|..+...+... +.+|+ ++| ++++ ++++.++ |+ ..++++++++++ .|+|++++|..
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~---g~~V~-~~~-~~~~---~~~~~~~-g~--~~~~~~~~~~~~--~D~vi~~vp~~ 69 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA---GHQLH-VTT-IGPV---ADELLSL-GA--VNVETARQVTEF--ADIIFIMVPDT 69 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT---TCEEE-ECC-SSCC---CHHHHTT-TC--BCCSSHHHHHHT--CSEEEECCSSH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC---CCEEE-EEc-CHHH---HHHHHHc-CC--cccCCHHHHHhc--CCEEEEECCCH
Confidence 47999999999999998888775 67875 778 7774 4444433 64 477899999876 89999999999
Q ss_pred ccHHHHHH-------HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 86 THYQILMD-------IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 86 ~h~~~~~~-------al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
.|.+.+.. .++ .|+. ++... +......++|.+.+.+ .++.++
T Consensus 70 ~~~~~v~~~~~~l~~~l~--~~~~-vv~~s-~~~~~~~~~l~~~~~~-~g~~~~ 118 (295)
T 1yb4_A 70 PQVEDVLFGEHGCAKTSL--QGKT-IVDMS-SISPIETKRFAQRVNE-MGADYL 118 (295)
T ss_dssp HHHHHHHHSTTSSTTSCC--TTEE-EEECS-CCCHHHHHHHHHHHHT-TTEEEE
T ss_pred HHHHHHHhCchhHhhcCC--CCCE-EEECC-CCCHHHHHHHHHHHHH-cCCeEE
Confidence 88776664 244 4554 45543 3466778888888844 466554
No 105
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.52 E-value=4.8e-07 Score=79.34 Aligned_cols=99 Identities=13% Similarity=0.210 Sum_probs=69.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCc----EEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGV----SVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~----~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
++||+|||+|.+|..+...+.+. +. +| .++|++++ +++++++++|+. .+++.++++++ .|+|+++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~---g~~~~~~V-~~~~r~~~---~~~~~~~~~g~~--~~~~~~e~~~~--aDvVila 70 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK---NIVSSNQI-ICSDLNTA---NLKNASEKYGLT--TTTDNNEVAKN--ADILILS 70 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT---TSSCGGGE-EEECSCHH---HHHHHHHHHCCE--ECSCHHHHHHH--CSEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHhC---CCCCCCeE-EEEeCCHH---HHHHHHHHhCCE--EeCChHHHHHh--CCEEEEE
Confidence 36899999999999999888775 43 54 47899988 566777777864 78899999987 8999999
Q ss_pred CCCCccHHHHHHHHcCC-CCCeEEEecCCCCCHHHH
Q 017143 82 TPNMTHYQILMDIINHP-KPHHVLVEKPLCTTVADC 116 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~-~g~~Vl~EKP~a~~~~e~ 116 (376)
+|++...+++.+....- .|+ +++---.+.+.+..
T Consensus 71 v~~~~~~~v~~~l~~~l~~~~-~vvs~~~gi~~~~l 105 (247)
T 3gt0_A 71 IKPDLYASIINEIKEIIKNDA-IIVTIAAGKSIEST 105 (247)
T ss_dssp SCTTTHHHHC---CCSSCTTC-EEEECSCCSCHHHH
T ss_pred eCHHHHHHHHHHHHhhcCCCC-EEEEecCCCCHHHH
Confidence 98877666665443210 344 44433334555543
No 106
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.52 E-value=6.7e-07 Score=80.62 Aligned_cols=110 Identities=17% Similarity=0.243 Sum_probs=81.7
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
+||+|||+|.+|..+...+.+. +.+|+ ++|++++ +++++.+ .|+ ..+++.++++.+ .|+|++++|...
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~---g~~V~-~~~~~~~---~~~~~~~-~g~--~~~~~~~~~~~~--~Dvvi~~vp~~~ 68 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH---GYPLI-IYDVFPD---ACKEFQD-AGE--QVVSSPADVAEK--ADRIITMLPTSI 68 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT---TCCEE-EECSSTH---HHHHHHT-TTC--EECSSHHHHHHH--CSEEEECCSSHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC---CCEEE-EEeCCHH---HHHHHHH-cCC--eecCCHHHHHhc--CCEEEEeCCCHH
Confidence 3799999999999998888775 56755 7899987 4444443 364 477899999876 899999999888
Q ss_pred cHHHHHHH-------HcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 017143 87 HYQILMDI-------INHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVG 134 (376)
Q Consensus 87 h~~~~~~a-------l~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~ 134 (376)
|.+.+... ++ .|+ +++. .-+.+....+++.+...+. ++. +++
T Consensus 69 ~~~~v~~~~~~~~~~l~--~~~-~vv~-~s~~~~~~~~~~~~~~~~~-g~~-~~~ 117 (296)
T 2gf2_A 69 NAIEAYSGANGILKKVK--KGS-LLID-SSTIDPAVSKELAKEVEKM-GAV-FMD 117 (296)
T ss_dssp HHHHHHHSTTSGGGTCC--TTC-EEEE-CSCCCHHHHHHHHHHHHHT-TCE-EEE
T ss_pred HHHHHHhCchhHHhcCC--CCC-EEEE-CCCCCHHHHHHHHHHHHHc-CCE-EEE
Confidence 77766653 24 454 7777 7788999999988877444 543 344
No 107
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.50 E-value=8.2e-07 Score=80.32 Aligned_cols=110 Identities=22% Similarity=0.246 Sum_probs=80.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.+|..+...+.+. +.+|+ ++|++++ +++++.++ |+ ..+++.++++++ .|+|++|+|..
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~---G~~V~-~~d~~~~---~~~~~~~~-g~--~~~~~~~~~~~~--aDvvi~~vp~~ 70 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA---GYLLN-VFDLVQS---AVDGLVAA-GA--SAARSARDAVQG--ADVVISMLPAS 70 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT---TCEEE-EECSSHH---HHHHHHHT-TC--EECSSHHHHHTT--CSEEEECCSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC---CCeEE-EEcCCHH---HHHHHHHC-CC--eEcCCHHHHHhC--CCeEEEECCCH
Confidence 57999999999999999888875 67765 6799988 44454443 64 478899999986 89999999988
Q ss_pred ccHHHHHH-------HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 86 THYQILMD-------IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 86 ~h~~~~~~-------al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
.+.+.+.. .++ .|+ +++..- +......+++.+...+. ++.+.
T Consensus 71 ~~~~~v~~~~~~~~~~l~--~~~-~vi~~s-t~~~~~~~~l~~~~~~~-g~~~~ 119 (302)
T 2h78_A 71 QHVEGLYLDDDGLLAHIA--PGT-LVLECS-TIAPTSARKIHAAARER-GLAML 119 (302)
T ss_dssp HHHHHHHHSSSCGGGSSC--SSC-EEEECS-CCCHHHHHHHHHHHHHT-TCCEE
T ss_pred HHHHHHHcCchhHHhcCC--CCc-EEEECC-CCCHHHHHHHHHHHHHc-CCEEE
Confidence 77666664 234 444 444442 45677778888887444 55543
No 108
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=98.50 E-value=1.8e-07 Score=86.07 Aligned_cols=146 Identities=12% Similarity=0.080 Sum_probs=92.4
Q ss_pred CceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC----CCCCccCCHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD----WPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
+++||+|+| +|.+|+.+++.|.+. +++++++++++... .+++.+.++ .....+.+.++ + .++|+|+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~--p~~elv~v~s~~~~----g~~~~~~~~~~~g~~~~~~~~~~~-~--~~vDvV~ 73 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSH--PYLEVKQVTSRRFA----GEPVHFVHPNLRGRTNLKFVPPEK-L--EPADILV 73 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTC--TTEEEEEEBCSTTT----TSBGGGTCGGGTTTCCCBCBCGGG-C--CCCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEECchhh----CchhHHhCchhcCcccccccchhH-h--cCCCEEE
Confidence 468999999 799999999999887 89999999985432 122222221 11012334443 3 3599999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecC-CCCC-HH--------------------HHHHHHHHHHhCCCeEEEEeecc
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKP-LCTT-VA--------------------DCKKVVDAARKRPDILVQVGLEY 137 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP-~a~~-~~--------------------e~~~l~~~a~~~~~~~~~v~~~~ 137 (376)
.|+|+..|.+.+.++++ +|++|+.=-. +-.+ .+ -.-|+-+..-+.. .+..+-++
T Consensus 74 ~a~g~~~s~~~a~~~~~--aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~~i~~~--~iIanp~C 149 (345)
T 2ozp_A 74 LALPHGVFAREFDRYSA--LAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYREALKGA--DWIAGAGC 149 (345)
T ss_dssp ECCCTTHHHHTHHHHHT--TCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHHHHHTC--SEEECCCH
T ss_pred EcCCcHHHHHHHHHHHH--CCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHHHhhcC--CEEeCCCc
Confidence 99999999999999999 8888765332 2211 11 0112221111222 34455555
Q ss_pred ccCHHHHHHHHHHHcCCCC--ceEEEEE
Q 017143 138 RYMPPVAKLIQIVKSGSIG--QVKMVAI 163 (376)
Q Consensus 138 r~~p~~~~~k~~i~~g~iG--~i~~~~~ 163 (376)
.-......++-+.+.+.|. ++.....
T Consensus 150 ~tt~~~~~l~pL~~~~~i~~~~i~v~t~ 177 (345)
T 2ozp_A 150 NATATLLGLYPLLKAGVLKPTPIFVTLL 177 (345)
T ss_dssp HHHHHHHHHHHHHHTTCBCSSCEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 5566677788888888777 6654444
No 109
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.50 E-value=9.6e-07 Score=80.19 Aligned_cols=112 Identities=15% Similarity=0.239 Sum_probs=82.0
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
..++||+|||+|.||......|.+. +.+|+ ++|+++++ ++++. +.|+ ..+++.++++++ .|+|++++|
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~---G~~V~-~~dr~~~~---~~~l~-~~g~--~~~~~~~~~~~~--aDvvi~~vp 86 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKN---GFKVT-VWNRTLSK---CDELV-EHGA--SVCESPAEVIKK--CKYTIAMLS 86 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSGGG---GHHHH-HTTC--EECSSHHHHHHH--CSEEEECCS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHC---CCeEE-EEeCCHHH---HHHHH-HCCC--eEcCCHHHHHHh--CCEEEEEcC
Confidence 3468999999999999999888875 67766 68999984 44443 3465 478899999987 799999999
Q ss_pred CCccHHHHH---H----HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 84 NMTHYQILM---D----IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 84 ~~~h~~~~~---~----al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
...+.+.+. + .++ .| .+++..- +.++...+++.+...+. |+.+.
T Consensus 87 ~~~~~~~v~~~~~~l~~~l~--~g-~~vv~~s-t~~~~~~~~~~~~~~~~-g~~~v 137 (310)
T 3doj_A 87 DPCAALSVVFDKGGVLEQIC--EG-KGYIDMS-TVDAETSLKINEAITGK-GGRFV 137 (310)
T ss_dssp SHHHHHHHHHSTTCGGGGCC--TT-CEEEECS-CCCHHHHHHHHHHHHHT-TCEEE
T ss_pred CHHHHHHHHhCchhhhhccC--CC-CEEEECC-CCCHHHHHHHHHHHHHc-CCEEE
Confidence 876655544 2 234 44 4556653 56788888898888554 65543
No 110
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.48 E-value=8.6e-07 Score=82.14 Aligned_cols=93 Identities=18% Similarity=0.257 Sum_probs=68.1
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-----------C-CccCCHHHHhh
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-----------L-KVFPGHQELLD 71 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~l~ 71 (376)
|+++||+|||+|.+|..+...+.+. +.+|+ ++++++++ ++++.++.++. + ..++++++++.
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~---g~~V~-~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALK---GQSVL-AWDIDAQR---IKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK 74 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHH---HHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhC---CCEEE-EEeCCHHH---HHHHHhcCCeEEeccccccccccceecCCHHHHHh
Confidence 3457999999999999988888774 67755 78998874 44554443321 1 25678888886
Q ss_pred CCCCCEEEEeCCCCccHHHHHHH---HcCCCCCeEEEec
Q 017143 72 SGLCDVVVVSTPNMTHYQILMDI---INHPKPHHVLVEK 107 (376)
Q Consensus 72 ~~~~D~V~i~t~~~~h~~~~~~a---l~~~~g~~Vl~EK 107 (376)
. .|+|++++|+..|.+++... ++ .|..|++.+
T Consensus 75 ~--~D~vi~~v~~~~~~~~~~~l~~~l~--~~~~vv~~~ 109 (359)
T 1bg6_A 75 D--ADVILIVVPAIHHASIAANIASYIS--EGQLIILNP 109 (359)
T ss_dssp T--CSEEEECSCGGGHHHHHHHHGGGCC--TTCEEEESS
T ss_pred c--CCEEEEeCCchHHHHHHHHHHHhCC--CCCEEEEcC
Confidence 5 89999999999998887665 45 577788883
No 111
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.48 E-value=9.8e-08 Score=84.65 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=82.6
Q ss_pred eEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCcc
Q 017143 8 KYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMTH 87 (376)
Q Consensus 8 ~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~h 87 (376)
+++|||+|.+|+.++..+... +.+ +.+++++++ ++++++++++.. +++++++ .+ .|+|+++||...|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~---g~~-v~v~~r~~~---~~~~l~~~~~~~---~~~~~~~-~~--~Divi~~tp~~~~ 184 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA---GLE-VWVWNRTPQ---RALALAEEFGLR---AVPLEKA-RE--ARLLVNATRVGLE 184 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT---TCC-EEEECSSHH---HHHHHHHHHTCE---ECCGGGG-GG--CSEEEECSSTTTT
T ss_pred eEEEECCcHHHHHHHHHHHHC---CCE-EEEEECCHH---HHHHHHHHhccc---hhhHhhc-cC--CCEEEEccCCCCC
Confidence 899999999999999988876 455 568999887 567777777752 6788887 54 8999999999877
Q ss_pred HH----HHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHH
Q 017143 88 YQ----ILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVA 144 (376)
Q Consensus 88 ~~----~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~ 144 (376)
.. +....++ .|++|+ + ++.+..+. +|.+.++++ |+.++.|..........
T Consensus 185 ~~~~~~l~~~~l~--~g~~vi-D--~~~~p~~t-~l~~~a~~~-g~~~v~g~~mlv~q~~~ 238 (263)
T 2d5c_A 185 DPSASPLPAELFP--EEGAAV-D--LVYRPLWT-RFLREAKAK-GLKVQTGLPMLAWQGAL 238 (263)
T ss_dssp CTTCCSSCGGGSC--SSSEEE-E--SCCSSSSC-HHHHHHHHT-TCEEECSHHHHHHHHHH
T ss_pred CCCCCCCCHHHcC--CCCEEE-E--eecCCccc-HHHHHHHHC-cCEEECcHHHHHHHHHH
Confidence 42 2245677 677554 6 44444444 477778454 88877775444433333
No 112
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=98.46 E-value=1.1e-07 Score=80.43 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=77.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChh-hHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQ-SRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
++.+++|||+|..|...+..+.. ...+++++|++|.+++ +..+ +.-.|+++...+++++++++.++|.++||+|
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~-~~~g~~iVg~~D~dp~~kiG~----~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvP 157 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFH-DRNKMQISMAFDLDSNDLVGK----TTEDGIPVYGISTINDHLIDSDIETAILTVP 157 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCC-TTSSEEEEEEEECTTSTTTTC----BCTTCCBEEEGGGHHHHC-CCSCCEEEECSC
T ss_pred CCCEEEEECcCHHHHHHHHhhhc-ccCCeEEEEEEeCCchhccCc----eeECCeEEeCHHHHHHHHHHcCCCEEEEecC
Confidence 46899999999999987665422 2369999999999987 4221 0123777444678999999888999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCH
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTV 113 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~ 113 (376)
...+.+++..++++| -+.|+.=-|..+++
T Consensus 158 s~~aq~v~d~lv~~G-Ik~I~nFap~~l~v 186 (212)
T 3keo_A 158 STEAQEVADILVKAG-IKGILSFSPVHLTL 186 (212)
T ss_dssp GGGHHHHHHHHHHHT-CCEEEECSSSCCCC
T ss_pred chhHHHHHHHHHHcC-CCEEEEcCCcccCC
Confidence 999999999999944 45577777777654
No 113
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.46 E-value=1.4e-06 Score=78.98 Aligned_cols=113 Identities=13% Similarity=0.079 Sum_probs=79.4
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||+|||+|.||..+...|.+. +++|+ ++|+++++ ++++.+. |+ ..+++.++++++ .|+|++++|+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~---G~~V~-~~dr~~~~---~~~~~~~-g~--~~~~~~~e~~~~--aDvVi~~vp~ 75 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ---GKRVA-IWNRSPGK---AAALVAA-GA--HLCESVKAALSA--SPATIFVLLD 75 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT---TCCEE-EECSSHHH---HHHHHHH-TC--EECSSHHHHHHH--SSEEEECCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCEEE-EEeCCHHH---HHHHHHC-CC--eecCCHHHHHhc--CCEEEEEeCC
Confidence 357999999999999999888875 67765 68999984 4444443 64 477899999987 8999999998
Q ss_pred CccHHHHHH-----HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 017143 85 MTHYQILMD-----IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVG 134 (376)
Q Consensus 85 ~~h~~~~~~-----al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~ 134 (376)
..+.+.+.. .+. .|+ +++..- +.++...+++.+..++. ++.+.-+
T Consensus 76 ~~~~~~v~~~~~l~~~~--~g~-ivid~s-t~~~~~~~~l~~~~~~~-g~~~vda 125 (306)
T 3l6d_A 76 NHATHEVLGMPGVARAL--AHR-TIVDYT-TNAQDEGLALQGLVNQA-GGHYVKG 125 (306)
T ss_dssp HHHHHHHHTSTTHHHHT--TTC-EEEECC-CCCTTHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHhcccchhhcc--CCC-EEEECC-CCCHHHHHHHHHHHHHc-CCeEEec
Confidence 876554432 234 444 444442 45666777777777444 6555443
No 114
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.44 E-value=1.5e-06 Score=78.06 Aligned_cols=122 Identities=10% Similarity=0.040 Sum_probs=77.5
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
|+++||+|||+|.||..+...+.... .+.+|+ ++|+++++ .+++. ++|+....++++++++.+ .|+|++++|
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~-~~d~~~~~---~~~~~-~~g~~~~~~~~~~~~~~~--aDvVilavp 75 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDH-PHYKIV-GYNRSDRS---RDIAL-ERGIVDEATADFKVFAAL--ADVIILAVP 75 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHC-TTSEEE-EECSSHHH---HHHHH-HTTSCSEEESCTTTTGGG--CSEEEECSC
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCC-CCcEEE-EEcCCHHH---HHHHH-HcCCcccccCCHHHhhcC--CCEEEEcCC
Confidence 45689999999999999988887751 256754 68998874 33333 345421356788888765 899999999
Q ss_pred CCccHHHHHHHHcC-CCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEee
Q 017143 84 NMTHYQILMDIINH-PKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGL 135 (376)
Q Consensus 84 ~~~h~~~~~~al~~-~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~ 135 (376)
+..+.+++.+.... -....+++.. ........+.|.+.. ...++.++.++
T Consensus 76 ~~~~~~v~~~l~~~~l~~~~ivi~~-~~~~~~~~~~l~~~l-~~~~~~~v~~~ 126 (290)
T 3b1f_A 76 IKKTIDFIKILADLDLKEDVIITDA-GSTKYEIVRAAEYYL-KDKPVQFVGSH 126 (290)
T ss_dssp HHHHHHHHHHHHTSCCCTTCEEECC-CSCHHHHHHHHHHHH-TTSSCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEC-CCCchHHHHHHHHhc-cccCCEEEEeC
Confidence 99887777665441 0123455532 122333445566655 32255555543
No 115
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.42 E-value=2.5e-06 Score=81.98 Aligned_cols=114 Identities=13% Similarity=0.196 Sum_probs=81.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc---CCCCCccCCHHHHhhC-CCCCEEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF---DWPLKVFPGHQELLDS-GLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~-~~~D~V~i 80 (376)
+++||+|||+|.||..+...+.+. +++| .++|++++ +++++.+++ |+ ..+.|++++++. .++|+|++
T Consensus 4 ~~~~IgvIG~G~mG~~lA~~L~~~---G~~V-~v~dr~~~---~~~~l~~~~~~~gi--~~~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 4 AQANFGVVGMAVMGKNLALNVESR---GYTV-AIYNRTTS---KTEEVFKEHQDKNL--VFTKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp TTBSEEEECCSHHHHHHHHHHHHT---TCCE-EEECSSHH---HHHHHHHHTTTSCE--EECSSHHHHHHTBCSSCEEEE
T ss_pred CCCcEEEEeeHHHHHHHHHHHHhC---CCEE-EEEcCCHH---HHHHHHHhCcCCCe--EEeCCHHHHHhhccCCCEEEE
Confidence 358999999999999999888875 6675 58899988 455666554 54 477899999875 35899999
Q ss_pred eCCCCccHHHHHHH----HcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 81 STPNMTHYQILMDI----INHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 81 ~t~~~~h~~~~~~a----l~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
++|+..+.+.+.+. ++ .|+ ++++- ......+..++.+.+ +..++.+.
T Consensus 75 avp~~~~v~~vl~~l~~~l~--~g~-iiId~-s~~~~~~~~~l~~~l-~~~g~~~v 125 (474)
T 2iz1_A 75 MVQAGAATDATIKSLLPLLD--IGD-ILIDG-GNTHFPDTMRRNAEL-ADSGINFI 125 (474)
T ss_dssp CCCTTHHHHHHHHHHGGGCC--TTC-EEEEC-SCCCHHHHHHHHHHT-TTSSCEEE
T ss_pred EccCchHHHHHHHHHHhhCC--CCC-EEEEC-CCCCHHHHHHHHHHH-HHCCCeEE
Confidence 99998776655543 44 455 55553 234556777888777 44465543
No 116
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.41 E-value=2e-06 Score=77.84 Aligned_cols=111 Identities=17% Similarity=0.197 Sum_probs=79.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-cCCHHHHhhCCCCCEEEEeCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-FPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~t~ 83 (376)
+++||+|||+|.||......|.+. +.+|+ ++|++++ +++++.+ .|.. . ++++++++++ .|+|++++|
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~---G~~V~-~~dr~~~---~~~~~~~-~g~~--~~~~~~~e~~~~--aDvvi~~vp 73 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA---GLSTW-GADLNPQ---ACANLLA-EGAC--GAAASAREFAGV--VDALVILVV 73 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHH---HHHHHHH-TTCS--EEESSSTTTTTT--CSEEEECCS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCeEE-EEECCHH---HHHHHHH-cCCc--cccCCHHHHHhc--CCEEEEECC
Confidence 357999999999999999888875 77766 6899988 4444443 3643 4 7888888876 899999999
Q ss_pred CCccHHHHH-------HHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 84 NMTHYQILM-------DIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 84 ~~~h~~~~~-------~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
+..+.+.+. ..++ .|+ +++..- +..+...+++.+...+ .++.+.
T Consensus 74 ~~~~~~~v~~~~~~l~~~l~--~g~-ivv~~s-t~~~~~~~~~~~~~~~-~g~~~~ 124 (303)
T 3g0o_A 74 NAAQVRQVLFGEDGVAHLMK--PGS-AVMVSS-TISSADAQEIAAALTA-LNLNML 124 (303)
T ss_dssp SHHHHHHHHC--CCCGGGSC--TTC-EEEECS-CCCHHHHHHHHHHHHT-TTCEEE
T ss_pred CHHHHHHHHhChhhHHhhCC--CCC-EEEecC-CCCHHHHHHHHHHHHH-cCCeEE
Confidence 976666554 2344 444 455543 4577888888888844 465543
No 117
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.41 E-value=4.2e-07 Score=82.56 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=81.3
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
...+|+|||+|.+|..++..+... .+++-+.++|++++ ++++++++++..+..++++++++++ .|+|+++||.
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~--~g~~~V~v~dr~~~---~~~~l~~~~~~~~~~~~~~~e~v~~--aDiVi~atp~ 206 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQ--FSFKEVRIWNRTKE---NAEKFADTVQGEVRVCSSVQEAVAG--ADVIITVTLA 206 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH--CCCSEEEEECSSHH---HHHHHHHHSSSCCEECSSHHHHHTT--CSEEEECCCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHh--CCCcEEEEEcCCHH---HHHHHHHHhhCCeEEeCCHHHHHhc--CCEEEEEeCC
Confidence 357999999999999999998876 46756779999988 6777887776112367899999976 8999999995
Q ss_pred CccHHHHH-HHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 017143 85 MTHYQILM-DIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVG 134 (376)
Q Consensus 85 ~~h~~~~~-~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~ 134 (376)
. + +++. ..++ .|+||++-...... .+++.+.+.++ ++ .++.
T Consensus 207 ~-~-~v~~~~~l~--~g~~vi~~g~~~p~---~~el~~~~~~~-g~-~~vD 248 (312)
T 2i99_A 207 T-E-PILFGEWVK--PGAHINAVGASRPD---WRELDDELMKE-AV-LYVD 248 (312)
T ss_dssp S-S-CCBCGGGSC--TTCEEEECCCCSTT---CCSBCHHHHHH-SE-EEES
T ss_pred C-C-cccCHHHcC--CCcEEEeCCCCCCC---ceeccHHHHhc-CE-EEEC
Confidence 3 2 2222 5678 88999986544332 35555555344 54 3443
No 118
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.40 E-value=1.7e-06 Score=78.06 Aligned_cols=111 Identities=15% Similarity=0.236 Sum_probs=78.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.+|..+...+.+. +.+|+ ++|+++++. +++.+ .|+ ..+++++++++ .|+|++++|+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~---G~~V~-~~dr~~~~~---~~~~~-~g~--~~~~~~~~~~~---aDvvi~~vp~~ 81 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW---PGGVT-VYDIRIEAM---TPLAE-AGA--TLADSVADVAA---ADLIHITVLDD 81 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS---TTCEE-EECSSTTTS---HHHHH-TTC--EECSSHHHHTT---SSEEEECCSSH
T ss_pred CCeEEEECcCHHHHHHHHHHHHC---CCeEE-EEeCCHHHH---HHHHH-CCC--EEcCCHHHHHh---CCEEEEECCCh
Confidence 57999999999999998888875 67765 679999843 34433 364 47889999986 79999999987
Q ss_pred ccHHHHHHHH-cCC-CCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 86 THYQILMDII-NHP-KPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 86 ~h~~~~~~al-~~~-~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
.+.+.+.+.+ ..- .| .+++..- +..+...+++.+...++ ++.+.
T Consensus 82 ~~~~~v~~~l~~~l~~g-~ivv~~s-t~~~~~~~~~~~~~~~~-g~~~~ 127 (296)
T 3qha_A 82 AQVREVVGELAGHAKPG-TVIAIHS-TISDTTAVELARDLKAR-DIHIV 127 (296)
T ss_dssp HHHHHHHHHHHTTCCTT-CEEEECS-CCCHHHHHHHHHHHGGG-TCEEE
T ss_pred HHHHHHHHHHHHhcCCC-CEEEEeC-CCCHHHHHHHHHHHHHc-CCEEE
Confidence 6655433332 210 34 4566654 56788888898888443 65544
No 119
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=98.38 E-value=5.2e-06 Score=74.77 Aligned_cols=113 Identities=20% Similarity=0.204 Sum_probs=86.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
|-|||+||+|.||......|.+. +++|+ |||++++ +++.+.+. |. ...+|..|+.+. .|+|++|.|+.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~---G~~v~-v~dr~~~---~~~~l~~~-Ga--~~a~s~~e~~~~--~dvv~~~l~~~ 70 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA---GYLLN-VFDLVQS---AVDGLVAA-GA--SAARSARDAVQG--ADVVISMLPAS 70 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT---TCEEE-EECSSHH---HHHHHHHT-TC--EECSSHHHHHTT--CSEEEECCSCH
T ss_pred cCEEEEeeehHHHHHHHHHHHhC---CCeEE-EEcCCHH---HHHHHHHc-CC--EEcCCHHHHHhc--CCceeecCCch
Confidence 34899999999999999888874 78866 7999998 56666543 64 478999999987 89999999998
Q ss_pred ccHHHHHHH-------HcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEee
Q 017143 86 THYQILMDI-------INHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGL 135 (376)
Q Consensus 86 ~h~~~~~~a-------l~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~ 135 (376)
.+.+-+... ++ .| .++++-- +.+++.++++.+.+++ .|+.+.-+.
T Consensus 71 ~~v~~V~~~~~g~~~~~~--~g-~iiId~s-T~~p~~~~~~a~~~~~-~G~~~lDaP 122 (300)
T 3obb_A 71 QHVEGLYLDDDGLLAHIA--PG-TLVLECS-TIAPTSARKIHAAARE-RGLAMLDAP 122 (300)
T ss_dssp HHHHHHHHSSSSSTTSCC--C--CEEEECS-CCCHHHHHHHHHHHHT-TTCEEEECC
T ss_pred HHHHHHHhchhhhhhcCC--CC-CEEEECC-CCCHHHHHHHHHHHHH-cCCEEEecC
Confidence 877766542 23 23 4777755 6799999999999954 477665443
No 120
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.37 E-value=1.4e-07 Score=84.33 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=54.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.||..+...+.+ . ++++.++|++++ ++++++++++. .++++++++++ .|+|++++|++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~---~-~~v~~v~~~~~~---~~~~~~~~~g~---~~~~~~~~~~~--~DvVilav~~~ 69 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKD---R-YEIGYILSRSID---RARNLAEVYGG---KAATLEKHPEL--NGVVFVIVPDR 69 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC--------CCCEECSSHH---HHHHHHHHTCC---CCCSSCCCCC-----CEEECSCTT
T ss_pred CceEEEEeCCHHHHHHHHHHHH---c-CcEEEEEeCCHH---HHHHHHHHcCC---ccCCHHHHHhc--CCEEEEeCChH
Confidence 4689999999999998877754 3 677678999987 56666667674 56777777765 89999999999
Q ss_pred ccHHHHHHH
Q 017143 86 THYQILMDI 94 (376)
Q Consensus 86 ~h~~~~~~a 94 (376)
.+.+++.+.
T Consensus 70 ~~~~v~~~l 78 (276)
T 2i76_A 70 YIKTVANHL 78 (276)
T ss_dssp THHHHHTTT
T ss_pred HHHHHHHHh
Confidence 987766543
No 121
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=98.35 E-value=6.7e-07 Score=82.60 Aligned_cols=144 Identities=15% Similarity=0.175 Sum_probs=90.6
Q ss_pred CCceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC-------CCCCccCCHHHHhhCCCC
Q 017143 4 NDTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD-------WPLKVFPGHQELLDSGLC 75 (376)
Q Consensus 4 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~ 75 (376)
|+++||+|+| +|.+|+.+++.|.+. ++++++++.++... .+++...++ .++ .+.+ ++.+. ++
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~~~~~----g~~~~~~~~~~~~~v~~dl-~~~~-~~~~~--~v 83 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANH--PHFQVTLMTADRKA----GQSMESVFPHLRAQKLPTL-VSVK-DADFS--TV 83 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTC--SSEEEEEEBCSTTT----TSCHHHHCGGGTTSCCCCC-BCGG-GCCGG--GC
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcC--CCcEEEEEeCchhc----CCCHHHhCchhcCcccccc-eecc-hhHhc--CC
Confidence 3468999999 899999999999887 89999999987533 222332222 011 1222 44443 49
Q ss_pred CEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCC--C-HHH---------------------HHHHHHHHHhCCCeEE
Q 017143 76 DVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCT--T-VAD---------------------CKKVVDAARKRPDILV 131 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~--~-~~e---------------------~~~l~~~a~~~~~~~~ 131 (376)
|+|+.|+|...|.+.+.++ + +|..|+- -+.+. + .+. .-|+-+..-+.. .+
T Consensus 84 DvVf~atp~~~s~~~a~~~-~--aG~~VId-~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~~~i~~~--~i 157 (359)
T 1xyg_A 84 DAVFCCLPHGTTQEIIKEL-P--TALKIVD-LSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILREDIKKA--RL 157 (359)
T ss_dssp SEEEECCCTTTHHHHHHTS-C--TTCEEEE-CSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHHHHHHTC--SE
T ss_pred CEEEEcCCchhHHHHHHHH-h--CCCEEEE-CCccccCCchhhhhhhhcCCcCChhhcCCceEECCccCHHHhccC--CE
Confidence 9999999999999999999 8 7886544 33322 1 110 111222111222 34
Q ss_pred EEeeccccCHHHHHHHHHHHcCCCC--ceEEEEE
Q 017143 132 QVGLEYRYMPPVAKLIQIVKSGSIG--QVKMVAI 163 (376)
Q Consensus 132 ~v~~~~r~~p~~~~~k~~i~~g~iG--~i~~~~~ 163 (376)
..+-++.-......++-+.+.+.|. ++..-..
T Consensus 158 IanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~ 191 (359)
T 1xyg_A 158 VANPGCYPTTIQLPLVPLLKANLIKHENIIIDAK 191 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEE
T ss_pred EECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEE
Confidence 4555555566677788888888777 6654443
No 122
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=98.33 E-value=8.1e-06 Score=74.23 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=80.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCC-cEEEEEeCCChh---hHH-HHHHHHHhcCCCCCccC-CHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQG-VSVVCIADPHLQ---SRQ-QALKLANAFDWPLKVFP-GHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~-~~~~~v~d~~~~---~~~-~~~~~~~~~~~~~~~~~-~~~~~l~~~~~D~V~ 79 (376)
++||+|||+|.||......|.+. + .+|+ ++|++++ +.+ ..+++ .+.|+ ++ +.++++++ .|+|+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~---G~~~V~-~~dr~~~~~~~~~~~~~~~-~~~g~----~~~s~~e~~~~--aDvVi 92 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR---NAARLA-AYDLRFNDPAASGALRARA-AELGV----EPLDDVAGIAC--ADVVL 92 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT---TCSEEE-EECGGGGCTTTHHHHHHHH-HHTTC----EEESSGGGGGG--CSEEE
T ss_pred CCeEEEECccHHHHHHHHHHHHc---CCCeEE-EEeCCCccccchHHHHHHH-HHCCC----CCCCHHHHHhc--CCEEE
Confidence 47999999999999998888875 6 7766 7899872 111 22222 23453 56 78888876 89999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
+++|+....+.+...+..-....+++..- +..+...+++.+...+ .++.+.
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~-~g~~~~ 143 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIAT-GKGSFV 143 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHT-SSCEEE
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHH-cCCeEE
Confidence 99999988887765543111235677765 6788888999888844 465543
No 123
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.33 E-value=2.1e-06 Score=77.32 Aligned_cols=114 Identities=13% Similarity=0.132 Sum_probs=80.5
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
-|||+||+|.||......|.+. +++|+ +||++++ +++++.+ .|. ...+|..++.+. .|+|+++.|+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~---G~~V~-v~dr~~~---~~~~l~~-~G~--~~~~s~~e~~~~--~dvvi~~l~~~~ 73 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA---GYELV-VWNRTAS---KAEPLTK-LGA--TVVENAIDAITP--GGIVFSVLADDA 73 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEE-EC----------CTTTT-TTC--EECSSGGGGCCT--TCEEEECCSSHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC---CCeEE-EEeCCHH---HHHHHHH-cCC--eEeCCHHHHHhc--CCceeeeccchh
Confidence 4899999999999999888885 88876 7999988 4545443 464 478899999986 899999999977
Q ss_pred cHHH-----HHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeecc
Q 017143 87 HYQI-----LMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEY 137 (376)
Q Consensus 87 h~~~-----~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~ 137 (376)
+.+- +...+. .| .|+++-- +.+++..+++.+.+.++ |+.+.-+...
T Consensus 74 ~~~~v~~~~~~~~~~--~~-~iiid~s-T~~p~~~~~~~~~~~~~-g~~~ldapVs 124 (297)
T 4gbj_A 74 AVEELFSMELVEKLG--KD-GVHVSMS-TISPETSRQLAQVHEWY-GAHYVGAPIF 124 (297)
T ss_dssp HHHHHSCHHHHHHHC--TT-CEEEECS-CCCHHHHHHHHHHHHHT-TCEEEECCEE
T ss_pred hHHHHHHHHHHhhcC--CC-eEEEECC-CCChHHHHHHHHHHHhc-CCceecCCcC
Confidence 6543 233455 44 4777765 67899999999999555 7666655444
No 124
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=98.32 E-value=4.3e-07 Score=83.93 Aligned_cols=147 Identities=15% Similarity=0.228 Sum_probs=90.7
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeC-CChhhHHHHHHHHHhcCC-----------CCCcc-CCHHHHhh
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIAD-PHLQSRQQALKLANAFDW-----------PLKVF-PGHQELLD 71 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d-~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~l~ 71 (376)
++||+|+| +|.+|+.+++.|..+ ++++|+++++ +... .+.+.+.++. +.... .+.+++++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~--p~~ev~~i~~s~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADH--PMFELTALAASERSA----GKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF 81 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTT----TSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG
T ss_pred cceEEEECcCCHHHHHHHHHHhcC--CCCEEEEEEcccccc----cccHHHhcccccccccccCceeeEEEeCCHHHHhc
Confidence 48999999 899999999999887 8999999984 3221 1112222221 11111 14555544
Q ss_pred CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC--------CCHHHH----HHHHHHHHh-CC-CeEEEEeecc
Q 017143 72 SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC--------TTVADC----KKVVDAARK-RP-DILVQVGLEY 137 (376)
Q Consensus 72 ~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a--------~~~~e~----~~l~~~a~~-~~-~~~~~v~~~~ 137 (376)
.++|+|+.|+|+..|.+.+.++++ +|+.|+.- |.. .-+.|. ..+.+..++ .+ +..+..+-++
T Consensus 82 -~~~DvV~~atp~~~~~~~a~~~~~--aG~~VId~-s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~~iIanpgC 157 (354)
T 1ys4_A 82 -EDVDIVFSALPSDLAKKFEPEFAK--EGKLIFSN-ASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDGAIITNPNC 157 (354)
T ss_dssp -TTCCEEEECCCHHHHHHHHHHHHH--TTCEEEEC-CSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCCSSEEEECCCH
T ss_pred -CCCCEEEECCCchHHHHHHHHHHH--CCCEEEEC-CchhcCCCCCCccCcccCHHHhcChhhhhhhcccCCeEEECCCH
Confidence 259999999999999999999999 88886653 222 111111 122222221 11 2245566666
Q ss_pred ccCHHHHHHHHHHHc-CCCCceEEEEE
Q 017143 138 RYMPPVAKLIQIVKS-GSIGQVKMVAI 163 (376)
Q Consensus 138 r~~p~~~~~k~~i~~-g~iG~i~~~~~ 163 (376)
-.......++-+.+. | |.++.....
T Consensus 158 ~tt~~~l~l~pL~~~~g-i~~~~v~t~ 183 (354)
T 1ys4_A 158 STICAVITLKPIMDKFG-LEAVFIATM 183 (354)
T ss_dssp HHHHHHHHHHHHHHHHC-CSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcC-CcEEEEEEE
Confidence 666677777777774 6 666654444
No 125
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.31 E-value=6.1e-06 Score=72.96 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=77.1
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+||+|||+|.||..+...|.+. +.+|+. +|+ +++ ..+++.+ .|+ . ++.++++.+ .|+|++++|+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~---g~~V~~-~~~~~~~~---~~~~~~~-~g~--~--~~~~~~~~~--aDvvi~~v~~ 66 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR---GVEVVT-SLEGRSPS---TIERART-VGV--T--ETSEEDVYS--CPVVISAVTP 66 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT---TCEEEE-CCTTCCHH---HHHHHHH-HTC--E--ECCHHHHHT--SSEEEECSCG
T ss_pred CeEEEEechHHHHHHHHHHHHC---CCeEEE-eCCccCHH---HHHHHHH-CCC--c--CCHHHHHhc--CCEEEEECCC
Confidence 4899999999999998888775 678765 787 544 3344433 364 2 678888876 8999999999
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCC
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPD 128 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~ 128 (376)
+.+.+.+...+. ..++++++. -+.+....++|.+.. ...+
T Consensus 67 ~~~~~~~~~~~~--~~~~~vi~~-s~~~~~~~~~l~~~~-~~~g 106 (264)
T 1i36_A 67 GVALGAARRAGR--HVRGIYVDI-NNISPETVRMASSLI-EKGG 106 (264)
T ss_dssp GGHHHHHHHHHT--TCCSEEEEC-SCCCHHHHHHHHHHC-SSSE
T ss_pred HHHHHHHHHHHH--hcCcEEEEc-cCCCHHHHHHHHHHH-hhCC
Confidence 988888766665 333388988 467778888888887 4434
No 126
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.29 E-value=3.4e-06 Score=75.64 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=79.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
+||+|||+|.||......+.+. +.+|+ ++|+++++.+ ++.+ .|+ ..+++.++++++ .|+|++++|+..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~---G~~V~-~~dr~~~~~~---~~~~-~g~--~~~~~~~~~~~~--advvi~~v~~~~ 69 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA---GFDVT-VWNRNPAKCA---PLVA-LGA--RQASSPAEVCAA--CDITIAMLADPA 69 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH---TCCEE-EECSSGGGGH---HHHH-HTC--EECSCHHHHHHH--CSEEEECCSSHH
T ss_pred CeEEEEccCHHHHHHHHHHHHC---CCeEE-EEcCCHHHHH---HHHH-CCC--eecCCHHHHHHc--CCEEEEEcCCHH
Confidence 5899999999999999888876 66755 6899998543 4333 264 477899999987 799999999876
Q ss_pred cHHHHH---H----HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 017143 87 HYQILM---D----IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQV 133 (376)
Q Consensus 87 h~~~~~---~----al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v 133 (376)
+.+.+. + .++ .| .+++..- +.++...+++.+...+. ++.+..
T Consensus 70 ~~~~v~~~~~~l~~~l~--~g-~~vv~~s-t~~~~~~~~~~~~~~~~-g~~~~~ 118 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIG--GG-RGYIDMS-TVDDETSTAIGAAVTAR-GGRFLE 118 (287)
T ss_dssp HHHHHHHSTTCGGGTCC--TT-CEEEECS-CCCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHcCchhhhhccc--CC-CEEEECC-CCCHHHHHHHHHHHHHc-CCEEEE
Confidence 655544 2 234 44 4556554 45788888888888554 655443
No 127
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=98.26 E-value=1.8e-06 Score=68.61 Aligned_cols=93 Identities=15% Similarity=0.126 Sum_probs=68.7
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
+++.++.|||+|..|..++..+.+. ++++++|++|.++.... . .-.|+++...+++.+++....+|.|+|+.|
T Consensus 2 ~~~~~vlIiGaG~~g~~l~~~l~~~--~g~~vvg~~d~~~~~~g--~---~i~g~pV~g~~~l~~~~~~~~id~viia~~ 74 (141)
T 3nkl_A 2 NAKKKVLIYGAGSAGLQLANMLRQG--KEFHPIAFIDDDRKKHK--T---TMQGITIYRPKYLERLIKKHCISTVLLAVP 74 (141)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEECSCGGGTT--C---EETTEEEECGGGHHHHHHHHTCCEEEECCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCcEEEEEEECCcccCC--C---EecCeEEECHHHHHHHHHHCCCCEEEEeCC
Confidence 4568999999999999998888876 69999999998875211 0 113555212456777777667999999999
Q ss_pred CCcc---HHHHHHHHcCCCCCeEEE
Q 017143 84 NMTH---YQILMDIINHPKPHHVLV 105 (376)
Q Consensus 84 ~~~h---~~~~~~al~~~~g~~Vl~ 105 (376)
...+ .+++..+.+ .|..|.+
T Consensus 75 ~~~~~~~~~i~~~l~~--~gv~v~~ 97 (141)
T 3nkl_A 75 SASQVQKKVIIESLAK--LHVEVLT 97 (141)
T ss_dssp TSCHHHHHHHHHHHHT--TTCEEEE
T ss_pred CCCHHHHHHHHHHHHH--cCCeEEE
Confidence 7666 566777778 7888764
No 128
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.25 E-value=6.5e-06 Score=74.84 Aligned_cols=111 Identities=14% Similarity=0.190 Sum_probs=76.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.+|..+...+... +.+| .++|+++++.+ ++.+ .|+ ..+++.++++++ .|+|++++|+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~---g~~V-~~~~~~~~~~~---~~~~-~g~--~~~~~~~~~~~~--~DvVi~av~~~ 97 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM---GHTV-TVWNRTAEKCD---LFIQ-EGA--RLGRTPAEVVST--CDITFACVSDP 97 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT---TCCE-EEECSSGGGGH---HHHH-TTC--EECSCHHHHHHH--CSEEEECCSSH
T ss_pred CCeEEEEcccHHHHHHHHHHHhC---CCEE-EEEeCCHHHHH---HHHH-cCC--EEcCCHHHHHhc--CCEEEEeCCCH
Confidence 47999999999999998888775 5675 57899988543 3333 464 367889898876 89999999976
Q ss_pred ccHHHHHH-------HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 017143 86 THYQILMD-------IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQV 133 (376)
Q Consensus 86 ~h~~~~~~-------al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v 133 (376)
.+.+.+.. .+. .|+.|+ ..- ..+....++|.+...+. ++.+..
T Consensus 98 ~~~~~v~~~~~~~~~~l~--~~~~vv-~~s-~~~~~~~~~l~~~~~~~-~~~~v~ 147 (316)
T 2uyy_A 98 KAAKDLVLGPSGVLQGIR--PGKCYV-DMS-TVDADTVTELAQVIVSR-GGRFLE 147 (316)
T ss_dssp HHHHHHHHSTTCGGGGCC--TTCEEE-ECS-CCCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHcCchhHhhcCC--CCCEEE-ECC-CCCHHHHHHHHHHHHHc-CCEEEE
Confidence 66655543 244 555554 322 34566777788777443 555443
No 129
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.22 E-value=1.1e-05 Score=73.19 Aligned_cols=106 Identities=16% Similarity=0.073 Sum_probs=69.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCc--EEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHH-HhhCCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGV--SVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQE-LLDSGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~--~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~D~V~i~t 82 (376)
.+||+|||+|.||......+.+. +. +|+ ++|+++++.+.+ .+.|+....++++++ ++++ .|+|++|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~---G~~~~V~-~~dr~~~~~~~a----~~~G~~~~~~~~~~~~~~~~--aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS---GFKGKIY-GYDINPESISKA----VDLGIIDEGTTSIAKVEDFS--PDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT---TCCSEEE-EECSCHHHHHHH----HHTTSCSEEESCTTGGGGGC--CSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CCCCEEE-EEECCHHHHHHH----HHCCCcchhcCCHHHHhhcc--CCEEEEeC
Confidence 47999999999999999888875 55 655 689998744332 345642135678888 7766 89999999
Q ss_pred CCCccHHHHHHHHcCC-CCCeEEEecCCCCCHHHHHHHHHHH
Q 017143 83 PNMTHYQILMDIINHP-KPHHVLVEKPLCTTVADCKKVVDAA 123 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~-~g~~Vl~EKP~a~~~~e~~~l~~~a 123 (376)
|+..-.+++.+....- .| .+++.-- +......+.+.+..
T Consensus 103 p~~~~~~vl~~l~~~l~~~-~iv~d~~-Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 103 PVRTFREIAKKLSYILSED-ATVTDQG-SVKGKLVYDLENIL 142 (314)
T ss_dssp CGGGHHHHHHHHHHHSCTT-CEEEECC-SCCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhccCCC-cEEEECC-CCcHHHHHHHHHhc
Confidence 9987666655443210 33 4666642 22333344555444
No 130
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.19 E-value=6.1e-06 Score=73.90 Aligned_cols=107 Identities=11% Similarity=0.118 Sum_probs=73.2
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
+||+|||+|.+|..+...+.. +.+| .++|+++++ ++++.+. |+. .++ +++++.+ .|+|++|+|+..
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~----g~~V-~~~~~~~~~---~~~~~~~-g~~--~~~-~~~~~~~--~D~vi~~v~~~~ 67 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR----RFPT-LVWNRTFEK---ALRHQEE-FGS--EAV-PLERVAE--ARVIFTCLPTTR 67 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT----TSCE-EEECSSTHH---HHHHHHH-HCC--EEC-CGGGGGG--CSEEEECCSSHH
T ss_pred CeEEEEcccHHHHHHHHHHhC----CCeE-EEEeCCHHH---HHHHHHC-CCc--ccC-HHHHHhC--CCEEEEeCCChH
Confidence 589999999999998887765 3454 478999884 4444433 543 445 7777765 899999999887
Q ss_pred cHHHHHHH----HcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 87 HYQILMDI----INHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 87 h~~~~~~a----l~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
|.+.+.+. ++ .|+.|+..- .......++|.+.+ ...++.+.
T Consensus 68 ~~~~v~~~l~~~l~--~~~~vv~~s--~~~~~~~~~l~~~~-~~~g~~~~ 112 (289)
T 2cvz_A 68 EVYEVAEALYPYLR--EGTYWVDAT--SGEPEASRRLAERL-REKGVTYL 112 (289)
T ss_dssp HHHHHHHHHTTTCC--TTEEEEECS--CCCHHHHHHHHHHH-HTTTEEEE
T ss_pred HHHHHHHHHHhhCC--CCCEEEECC--CCCHHHHHHHHHHH-HHcCCEEE
Confidence 76655433 34 466665542 34667778888888 44465544
No 131
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=98.19 E-value=2.3e-05 Score=74.98 Aligned_cols=115 Identities=10% Similarity=0.184 Sum_probs=78.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc--CCCCCccCCHHHHhhC-CCCCEEEEe
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF--DWPLKVFPGHQELLDS-GLCDVVVVS 81 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~D~V~i~ 81 (376)
.+++|||||+|.||......+.+. +++|+ ++|++++ +++++.++. +..+..+.+++++++. .++|+|+++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~---G~~V~-v~dr~~~---~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~ 75 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH---GFVVC-AFNRTVS---KVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILL 75 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT---TCCEE-EECSSTH---HHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEEC
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC---CCEEE-EEeCCHH---HHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEe
Confidence 468999999999999999888875 67765 7899998 455555442 3222346899999874 348999999
Q ss_pred CCCCccHHHHHHH----HcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEE
Q 017143 82 TPNMTHYQILMDI----INHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILV 131 (376)
Q Consensus 82 t~~~~h~~~~~~a----l~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 131 (376)
+|+..+.+-+.+. ++ .| .+++..- .....+..++.+...++ |+.+
T Consensus 76 Vp~~~~v~~vl~~l~~~L~--~g-~iIId~s-t~~~~~t~~~~~~l~~~-Gi~f 124 (484)
T 4gwg_A 76 VKAGQAVDDFIEKLVPLLD--TG-DIIIDGG-NSEYRDTTRRCRDLKAK-GILF 124 (484)
T ss_dssp SCSSHHHHHHHHHHGGGCC--TT-CEEEECS-CCCHHHHHHHHHHHHHT-TCEE
T ss_pred cCChHHHHHHHHHHHHhcC--CC-CEEEEcC-CCCchHHHHHHHHHHhh-cccc
Confidence 9997655444333 33 34 4666643 34566777777777454 6543
No 132
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.19 E-value=1.8e-05 Score=76.10 Aligned_cols=113 Identities=15% Similarity=0.235 Sum_probs=77.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC----C-CCccCCHHHHhhC-CCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW----P-LKVFPGHQELLDS-GLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~l~~-~~~D~V~i 80 (376)
+||+|||+|.||..+...+.+. +.+| .++|++++ +++++.+++|. . +..+.+++++++. .++|+|++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~---G~~V-~v~dr~~~---~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVil 74 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK---GFKV-AVFNRTYS---KSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALI 74 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT---TCCE-EEECSSHH---HHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEE
T ss_pred CEEEEEChHHHHHHHHHHHHHC---CCEE-EEEeCCHH---HHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEE
Confidence 5899999999999999888875 6675 58899988 45566655551 0 2367899998874 24899999
Q ss_pred eCCCCccHHHHHH----HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEE
Q 017143 81 STPNMTHYQILMD----IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILV 131 (376)
Q Consensus 81 ~t~~~~h~~~~~~----al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 131 (376)
++|+..+.+.+.+ .++ .|+ +++.. ......+..++.+...+ .++.+
T Consensus 75 aVp~~~~v~~vl~~l~~~l~--~g~-iIId~-sng~~~~~~~l~~~l~~-~g~~~ 124 (478)
T 1pgj_A 75 LVQAGAATDSTIEQLKKVFE--KGD-ILVDT-GNAHFKDQGRRAQQLEA-AGLRF 124 (478)
T ss_dssp CCCCSHHHHHHHHHHHHHCC--TTC-EEEEC-CCCCHHHHHHHHHHHHT-TTCEE
T ss_pred ecCChHHHHHHHHHHHhhCC--CCC-EEEEC-CCCChHHHHHHHHHHHH-CCCeE
Confidence 9999866554443 345 454 55553 23345567777777733 36543
No 133
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.17 E-value=4.5e-06 Score=73.77 Aligned_cols=99 Identities=15% Similarity=0.125 Sum_probs=67.5
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCC-cEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQG-VSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~-~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
+||+|||+|.||..+...+.+. + .++ .++|++++ +++++.+++|+. .+++.++++ + .|+|++++| .
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~---g~~~v-~~~~r~~~---~~~~~~~~~g~~--~~~~~~~~~-~--~D~vi~~v~-~ 67 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ---GGYRI-YIANRGAE---KRERLEKELGVE--TSATLPELH-S--DDVLILAVK-P 67 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---CSCEE-EEECSSHH---HHHHHHHHTCCE--EESSCCCCC-T--TSEEEECSC-H
T ss_pred CEEEEECchHHHHHHHHHHHHC---CCCeE-EEECCCHH---HHHHHHHhcCCE--EeCCHHHHh-c--CCEEEEEeC-c
Confidence 4899999999999999888875 4 554 57899987 566666677864 677777777 4 899999999 4
Q ss_pred ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHH
Q 017143 86 THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAA 123 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a 123 (376)
.+..-+.+.+.. . ..+++.---+.+. ..|.+..
T Consensus 68 ~~~~~v~~~l~~-~-~~ivv~~~~g~~~---~~l~~~~ 100 (263)
T 1yqg_A 68 QDMEAACKNIRT-N-GALVLSVAAGLSV---GTLSRYL 100 (263)
T ss_dssp HHHHHHHTTCCC-T-TCEEEECCTTCCH---HHHHHHT
T ss_pred hhHHHHHHHhcc-C-CCEEEEecCCCCH---HHHHHHc
Confidence 444444444441 2 3466665344454 3344444
No 134
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.17 E-value=1.4e-05 Score=71.12 Aligned_cols=103 Identities=15% Similarity=0.185 Sum_probs=70.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
+||+|||+|.||..+...+.+. +.+|+ ++|+++++ ++.+. ++|+....+++++++ . +.|+|++++|++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~---g~~V~-~~~~~~~~---~~~~~-~~g~~~~~~~~~~~~-~--~~D~vi~av~~~~ 69 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR---GHYLI-GVSRQQST---CEKAV-ERQLVDEAGQDLSLL-Q--TAKIIFLCTPIQL 69 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHH---HHHHH-HTTSCSEEESCGGGG-T--TCSEEEECSCHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC---CCEEE-EEECCHHH---HHHHH-hCCCCccccCCHHHh-C--CCCEEEEECCHHH
Confidence 4899999999999998888775 56755 57999874 44443 456532356788887 4 4899999999987
Q ss_pred cHHHHHHHHcCC-CCCeEEEecCCCCCHHHHHHHHHH
Q 017143 87 HYQILMDIINHP-KPHHVLVEKPLCTTVADCKKVVDA 122 (376)
Q Consensus 87 h~~~~~~al~~~-~g~~Vl~EKP~a~~~~e~~~l~~~ 122 (376)
+.+++.+....- .+. +++.- .+.+....+.+.+.
T Consensus 70 ~~~~~~~l~~~~~~~~-~vv~~-~~~~~~~~~~~~~~ 104 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTA-IVTDV-ASVKTAIAEPASQL 104 (279)
T ss_dssp HHHHHHHHGGGSCTTC-EEEEC-CSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCC-EEEEC-CCCcHHHHHHHHHH
Confidence 777776553310 344 45553 44566555555443
No 135
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.14 E-value=2.5e-06 Score=77.21 Aligned_cols=92 Identities=18% Similarity=0.282 Sum_probs=69.6
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
..-+++|||+|.+|..|+..+... ..++-+.|++++ ...+.++++.+++|+++..+ ++++++.+ .|+|+.|||.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~--~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav~~--aDIVi~aT~s 193 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR--FALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIAAQ--ADIVVTATRS 193 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH--SCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHHHH--CSEEEECCCC
T ss_pred CCcEEEEECccHHHHHHHHHHHHh--CCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHHhh--CCEEEEccCC
Confidence 346899999999999999999876 357777799999 43334455666678764456 99999987 8999999997
Q ss_pred CccHHHH-HHHHcCCCCCeEEEe
Q 017143 85 MTHYQIL-MDIINHPKPHHVLVE 106 (376)
Q Consensus 85 ~~h~~~~-~~al~~~~g~~Vl~E 106 (376)
.. +++ ...++ .|.||.+=
T Consensus 194 ~~--pvl~~~~l~--~G~~V~~v 212 (313)
T 3hdj_A 194 TT--PLFAGQALR--AGAFVGAI 212 (313)
T ss_dssp SS--CSSCGGGCC--TTCEEEEC
T ss_pred CC--cccCHHHcC--CCcEEEEC
Confidence 53 222 24578 88999875
No 136
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.14 E-value=2.3e-06 Score=76.23 Aligned_cols=121 Identities=23% Similarity=0.318 Sum_probs=82.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+++|||+|.+|+.++..+... +++ +.+++++++ +++++++++++. .++++++++++ .|+|+++||..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~---g~~-V~v~~r~~~---~~~~l~~~~g~~--~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKE---GAK-VFLWNRTKE---KAIKLAQKFPLE--VVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHH---TCE-EEEECSSHH---HHHHHTTTSCEE--ECSCGGGTGGG--CSEEEECSSTT
T ss_pred CCEEEEECchHHHHHHHHHHHHc---CCE-EEEEECCHH---HHHHHHHHcCCe--eehhHHhhhcC--CCEEEEeCCCC
Confidence 46899999999999999998887 455 558999987 677888887754 66688888875 89999999998
Q ss_pred ccHH---HH-HHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHH
Q 017143 86 THYQ---IL-MDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKL 146 (376)
Q Consensus 86 ~h~~---~~-~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~ 146 (376)
.+.. .+ ...++ .|..| ++ ++. ...++.+.++++ |+.++.|............
T Consensus 198 ~~~~~~~~i~~~~l~--~g~~v-iD--v~~---~~t~ll~~a~~~-g~~~v~g~~mlv~q~~~a~ 253 (275)
T 2hk9_A 198 LKDEDPEIFNYDLIK--KDHVV-VD--IIY---KETKLLKKAKEK-GAKLLDGLPMLLWQGIEAF 253 (275)
T ss_dssp SSTTCCCSSCGGGCC--TTSEE-EE--SSS---SCCHHHHHHHHT-TCEEECSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHcC--CCCEE-EE--cCC---ChHHHHHHHHHC-cCEEECCHHHHHHHHHHHH
Confidence 7642 12 24466 56554 44 222 334466677454 7787777544443333333
No 137
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.13 E-value=3e-05 Score=74.44 Aligned_cols=117 Identities=14% Similarity=0.162 Sum_probs=77.7
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc---CCCCCccCCHHHHhhC-CCCCEEE
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF---DWPLKVFPGHQELLDS-GLCDVVV 79 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~-~~~D~V~ 79 (376)
|++.+|+|||+|.||......+.+. +++|+ +++++++ +++++.+++ |+ ..++|++++++. .++|+|+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~---G~~V~-v~~r~~~---~~~~l~~~~~~~gi--~~~~s~~e~v~~l~~aDvVi 83 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR---GYTVS-IFNRSRE---KTEEVIAENPGKKL--VPYYTVKEFVESLETPRRIL 83 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT---TCCEE-EECSSHH---HHHHHHHHSTTSCE--EECSSHHHHHHTBCSSCEEE
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC---CCeEE-EEeCCHH---HHHHHHhhCCCCCe--EEeCCHHHHHhCCCCCCEEE
Confidence 4578999999999999998888875 67754 7899988 455666554 54 467899998875 3489999
Q ss_pred EeCCCCccHHHHHHHH-cCC-CCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 80 VSTPNMTHYQILMDII-NHP-KPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 80 i~t~~~~h~~~~~~al-~~~-~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
+++|+....+-+++.+ ..- .|. +++.- ......+..++.+...++ ++.+.
T Consensus 84 l~Vp~~~~v~~vl~~l~~~l~~g~-iIId~-s~g~~~~t~~l~~~l~~~-g~~~v 135 (480)
T 2zyd_A 84 LMVKAGAGTDAAIDSLKPYLDKGD-IIIDG-GNTFFQDTIRRNRELSAE-GFNFI 135 (480)
T ss_dssp ECSCSSSHHHHHHHHHGGGCCTTC-EEEEC-SCCCHHHHHHHHHHHHHT-TCEEE
T ss_pred EECCCHHHHHHHHHHHHhhcCCCC-EEEEC-CCCCHHHHHHHHHHHHHC-CCCee
Confidence 9999975544444332 210 343 55542 233455666777766444 55443
No 138
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.13 E-value=2.6e-05 Score=75.03 Aligned_cols=113 Identities=11% Similarity=0.221 Sum_probs=77.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHH-h---cCCCCCccCCHHHHhhC-CCCCEEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLAN-A---FDWPLKVFPGHQELLDS-GLCDVVVV 80 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~l~~-~~~D~V~i 80 (376)
++||+|||+|.||..+...+.+. +++| .++|++++ +++++.+ + .|+ ..+.+++++++. .++|+|++
T Consensus 2 ~m~IgvIG~G~mG~~lA~~La~~---G~~V-~v~dr~~~---~~~~l~~~~~~g~gi--~~~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 2 QADIALIGLAVMGQNLILNMNDH---GFVV-CAFNRTVS---KVDDFLANEAKGTKV--LGAHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT---TCCE-EEECSSTH---HHHHHHHTTTTTSSC--EECSSHHHHHHHBCSSCEEEE
T ss_pred CCeEEEEChHHHHHHHHHHHHHC---CCeE-EEEeCCHH---HHHHHHhccccCCCe--EEeCCHHHHHhhccCCCEEEE
Confidence 36899999999999999888875 6775 57899988 4555554 2 354 467899999862 24899999
Q ss_pred eCCCCccHHHHHH----HHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 81 STPNMTHYQILMD----IINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 81 ~t~~~~h~~~~~~----al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
++|+..+.+.+.+ .++ .|+ +++.. ......+..++.+...+. ++.+.
T Consensus 73 aVp~~~~v~~vl~~l~~~l~--~g~-iII~~-s~~~~~~~~~l~~~l~~~-g~~~v 123 (482)
T 2pgd_A 73 LVKAGQAVDNFIEKLVPLLD--IGD-IIIDG-GNSEYRDTMRRCRDLKDK-GILFV 123 (482)
T ss_dssp CSCTTHHHHHHHHHHHHHCC--TTC-EEEEC-SCCCHHHHHHHHHHHHHT-TCEEE
T ss_pred eCCChHHHHHHHHHHHhhcC--CCC-EEEEC-CCCCHHHHHHHHHHHHHc-CCeEe
Confidence 9999866555443 345 455 55552 233455666777766443 65443
No 139
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.12 E-value=4.7e-06 Score=76.51 Aligned_cols=133 Identities=23% Similarity=0.242 Sum_probs=84.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
.++|+|||+|.+|..+...+... +++++ +++++++ +..+.+.++|+. .+ +.++++.+ .|+|++++|+.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~---G~~V~-~~~~~~~---~~~~~a~~~G~~--~~-~~~e~~~~--aDvVilavp~~ 83 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS---GVDVT-VGLRSGS---ATVAKAEAHGLK--VA-DVKTAVAA--ADVVMILTPDE 83 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT---TCCEE-EECCTTC---HHHHHHHHTTCE--EE-CHHHHHHT--CSEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC---cCEEE-EEECChH---HHHHHHHHCCCE--Ec-cHHHHHhc--CCEEEEeCCcH
Confidence 46899999999999999988875 56765 6888776 334455667864 55 88888876 89999999999
Q ss_pred ccHHHHH-HH---HcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCceEEE
Q 017143 86 THYQILM-DI---INHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQVKMV 161 (376)
Q Consensus 86 ~h~~~~~-~a---l~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i~~~ 161 (376)
.+.+++. +. ++ .|..|..-+. ..- .........++.+...+. ..| ....+++.+.| .|....+
T Consensus 84 ~~~~v~~~~i~~~l~--~~~ivi~~~g----v~~---~~~~~~~~~~~~vv~~~P--~gp-~~a~~~l~~~G-~g~~~ii 150 (338)
T 1np3_A 84 FQGRLYKEEIEPNLK--KGATLAFAHG----FSI---HYNQVVPRADLDVIMIAP--KAP-GHTVRSEFVKG-GGIPDLI 150 (338)
T ss_dssp HHHHHHHHHTGGGCC--TTCEEEESCC----HHH---HTTSSCCCTTCEEEEEEE--SSC-SHHHHHHHHTT-CCCCEEE
T ss_pred HHHHHHHHHHHhhCC--CCCEEEEcCC----chh---HHHhhcCCCCcEEEeccC--CCC-chhHHHHHhcc-CCCeEEE
Confidence 8877776 43 44 5665654432 221 112221123555555555 223 23345555544 3665554
Q ss_pred EE
Q 017143 162 AI 163 (376)
Q Consensus 162 ~~ 163 (376)
..
T Consensus 151 ~~ 152 (338)
T 1np3_A 151 AI 152 (338)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 140
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.10 E-value=1.9e-05 Score=75.26 Aligned_cols=71 Identities=14% Similarity=0.250 Sum_probs=53.2
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc-----------------CCCCCccCCHHHH
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF-----------------DWPLKVFPGHQEL 69 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~ 69 (376)
+||+|||+|.+|......+++. +.+|+ ++|+++++.+ ++.+.. .-.+..++|++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~---G~~V~-~~D~~~~~v~---~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea 75 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL---GANVR-CIDTDRNKIE---QLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQA 75 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHHHH---HHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc---CCEEE-EEECCHHHHH---HHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHH
Confidence 6999999999999988888875 78877 6899998544 433310 0002356788888
Q ss_pred hhCCCCCEEEEeCCCCc
Q 017143 70 LDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~ 86 (376)
+++ .|+|++|+|+..
T Consensus 76 ~~~--aDvViiaVptp~ 90 (450)
T 3gg2_A 76 VPE--ADIIFIAVGTPA 90 (450)
T ss_dssp GGG--CSEEEECCCCCB
T ss_pred Hhc--CCEEEEEcCCCc
Confidence 876 899999999874
No 141
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.10 E-value=6.7e-06 Score=71.91 Aligned_cols=82 Identities=17% Similarity=0.234 Sum_probs=61.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH-HH----------HHHHHHhcCCCCCccCCHHHHhhCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR-QQ----------ALKLANAFDWPLKVFPGHQELLDSG 73 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~l~~~ 73 (376)
...||+|||+|.||......|.+. +.+|+ ++|+++++. .+ ..+++++++. ..+.+.++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~---G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~- 90 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL---GHEVT-IGTRDPKATLARAEPDAMGAPPFSQWLPEHPH--VHLAAFADVAAG- 90 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESCHHHHHTCC-------CCHHHHGGGSTT--CEEEEHHHHHHH-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC---CCEEE-EEeCChhhhhhhhhhhhhcchhhhHHHhhcCc--eeccCHHHHHhc-
Confidence 468999999999999998888875 67765 689988730 00 4555656553 367889999887
Q ss_pred CCCEEEEeCCCCccHHHHHHH
Q 017143 74 LCDVVVVSTPNMTHYQILMDI 94 (376)
Q Consensus 74 ~~D~V~i~t~~~~h~~~~~~a 94 (376)
.|+|++++|++...+.+.+.
T Consensus 91 -aDvVilavp~~~~~~~~~~i 110 (245)
T 3dtt_A 91 -AELVVNATEGASSIAALTAA 110 (245)
T ss_dssp -CSEEEECSCGGGHHHHHHHH
T ss_pred -CCEEEEccCcHHHHHHHHHh
Confidence 89999999999877776543
No 142
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.05 E-value=1.2e-06 Score=69.45 Aligned_cols=115 Identities=11% Similarity=0.061 Sum_probs=80.0
Q ss_pred ceeEEEEeC----ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIGM----GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~----G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+-+|+|||+ |.+|..++..+.+. +++ |++.++.+. .++ -.|++ +|.|++++-+. +|+++|+
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~---G~~---v~~vnp~~~--~~~---i~G~~--~~~sl~el~~~--vDlavi~ 77 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQ---GYR---VLPVNPRFQ--GEE---LFGEE--AVASLLDLKEP--VDILDVF 77 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHT---TCE---EEEECGGGT--TSE---ETTEE--CBSSGGGCCSC--CSEEEEC
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHC---CCE---EEEeCCCcc--cCc---CCCEE--ecCCHHHCCCC--CCEEEEE
Confidence 568999999 68899888888775 777 444555410 111 14654 99999998764 9999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEE-eeccccCHH
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQV-GLEYRYMPP 142 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v-~~~~r~~p~ 142 (376)
+|+....+++.+|++.|. +.|++-.+.. .+++.+.+++ +|+.+.- ++.....|.
T Consensus 78 vp~~~~~~v~~~~~~~gi-~~i~~~~g~~-----~~~~~~~a~~-~Gir~vgpnc~g~~~~~ 132 (140)
T 1iuk_A 78 RPPSALMDHLPEVLALRP-GLVWLQSGIR-----HPEFEKALKE-AGIPVVADRCLMVEHKR 132 (140)
T ss_dssp SCHHHHTTTHHHHHHHCC-SCEEECTTCC-----CHHHHHHHHH-TTCCEEESCCHHHHHHH
T ss_pred eCHHHHHHHHHHHHHcCC-CEEEEcCCcC-----HHHHHHHHHH-cCCEEEcCCccceEChh
Confidence 999888888888888442 4577765543 3778888855 4766543 455444443
No 143
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.02 E-value=4e-05 Score=73.68 Aligned_cols=76 Identities=16% Similarity=0.239 Sum_probs=53.1
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-----------------CCccCCH
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-----------------LKVFPGH 66 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~ 66 (376)
++++||+|||+|.+|..+...|++. .++.+|+ ++|+++++ .+++.+. +.+ +..++++
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~-g~g~~V~-~~D~~~~~---v~~l~~g-~~~i~e~gl~~~~~~~~~~~l~~t~~~ 80 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHK-CPHITVT-VVDMNTAK---IAEWNSD-KLPIYEPGLDEIVFAARGRNLFFSSDI 80 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHH-CTTSEEE-EECSCHHH---HHHHTSS-SCSSCCTTHHHHHHHHBTTTEEEESCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhc-CCCCEEE-EEECCHHH---HHHHHCC-CCCcCCCCHHHHHHHhhcCCEEEECCH
Confidence 3457999999999999988888775 1368877 47999884 4444321 111 2345677
Q ss_pred HHHhhCCCCCEEEEeCCCCcc
Q 017143 67 QELLDSGLCDVVVVSTPNMTH 87 (376)
Q Consensus 67 ~~~l~~~~~D~V~i~t~~~~h 87 (376)
++.+++ .|+|+||+|+..+
T Consensus 81 ~~~~~~--aDvvii~Vptp~~ 99 (481)
T 2o3j_A 81 PKAIAE--ADLIFISVNTPTK 99 (481)
T ss_dssp HHHHHH--CSEEEECCCCCBC
T ss_pred HHHhhc--CCEEEEecCCccc
Confidence 777765 8999999887553
No 144
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.99 E-value=2.5e-05 Score=69.92 Aligned_cols=76 Identities=21% Similarity=0.317 Sum_probs=56.8
Q ss_pred ceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
++||+|||+ |.+|......+.+. +.+|+ ++|+++++ ++++.+ +|+. . .+.++++++ .|+|++++|+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~---g~~V~-~~~r~~~~---~~~~~~-~g~~--~-~~~~~~~~~--aDvVi~av~~ 77 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS---AHHLA-AIEIAPEG---RDRLQG-MGIP--L-TDGDGWIDE--ADVVVLALPD 77 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS---SSEEE-EECCSHHH---HHHHHH-TTCC--C-CCSSGGGGT--CSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC---CCEEE-EEECCHHH---HHHHHh-cCCC--c-CCHHHHhcC--CCEEEEcCCc
Confidence 469999999 99999998888775 67876 78999874 444433 5754 3 366677765 8999999999
Q ss_pred CccHHHHHHH
Q 017143 85 MTHYQILMDI 94 (376)
Q Consensus 85 ~~h~~~~~~a 94 (376)
....+++.+.
T Consensus 78 ~~~~~v~~~l 87 (286)
T 3c24_A 78 NIIEKVAEDI 87 (286)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 8766655544
No 145
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.99 E-value=8.2e-06 Score=75.11 Aligned_cols=141 Identities=14% Similarity=0.143 Sum_probs=83.0
Q ss_pred CCCC-CceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC-----------CCCcc-CCH
Q 017143 1 MAAN-DTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW-----------PLKVF-PGH 66 (376)
Q Consensus 1 m~~~-~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~ 66 (376)
|.+| +++|||||| +|..|...+..|.++ |.++|+.+.+++.. .+.+...|.. +..+. .+.
T Consensus 1 ~~~M~~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~sa----Gk~~~~~~p~~~~~~~~~~~~~~~v~~~~~ 74 (359)
T 4dpl_A 1 MILMRRTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSV----GKPYGEVVRWQTVGQVPKEIADMEIKPTDP 74 (359)
T ss_dssp -----CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTT----TSBHHHHCCCCSSSCCCHHHHTCBCEECCG
T ss_pred CCcCCCCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhc----CCChhHhcccccccccccccccceEEeCCH
Confidence 5544 579999999 699999999988888 99999999876542 2222222210 10111 122
Q ss_pred HHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEE-e--------cCCC---CCHHHHHHHHHHHHhC-CCeEEEE
Q 017143 67 QELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLV-E--------KPLC---TTVADCKKVVDAARKR-PDILVQV 133 (376)
Q Consensus 67 ~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~-E--------KP~a---~~~~e~~~l~~~a~~~-~~~~~~v 133 (376)
++ + .++|+|+.|+|+....+++.++++ +|..|+- - -|.. .+.++.+.+...-+++ .+-.+..
T Consensus 75 ~~-~--~~vDvvf~a~p~~~s~~~a~~~~~--~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIa 149 (359)
T 4dpl_A 75 KL-M--DDVDIIFSPLPQGAAGPVEEQFAK--EGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVT 149 (359)
T ss_dssp GG-C--TTCCEEEECCCTTTHHHHHHHHHH--TTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEE
T ss_pred HH-h--cCCCEEEECCChHHHHHHHHHHHH--CCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEE
Confidence 22 3 359999999999999999999999 7776654 1 2322 2333332222211011 0123444
Q ss_pred eeccccCHHHHHHHHHHHc
Q 017143 134 GLEYRYMPPVAKLIQIVKS 152 (376)
Q Consensus 134 ~~~~r~~p~~~~~k~~i~~ 152 (376)
+-++.-......++-+.+.
T Consensus 150 nPgC~tt~~~l~L~PL~~~ 168 (359)
T 4dpl_A 150 TPLCTAQGAAIPLGAIFKD 168 (359)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHh
Confidence 5555445556666777765
No 146
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.99 E-value=8.2e-06 Score=75.11 Aligned_cols=141 Identities=14% Similarity=0.143 Sum_probs=83.0
Q ss_pred CCCC-CceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC-----------CCCcc-CCH
Q 017143 1 MAAN-DTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW-----------PLKVF-PGH 66 (376)
Q Consensus 1 m~~~-~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~ 66 (376)
|.+| +++|||||| +|..|...+..|.++ |.++|+.+.+++.. .+.+...|.. +..+. .+.
T Consensus 1 ~~~M~~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~sa----Gk~~~~~~p~~~~~~~~~~~~~~~v~~~~~ 74 (359)
T 4dpk_A 1 MILMRRTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSV----GKPYGEVVRWQTVGQVPKEIADMEIKPTDP 74 (359)
T ss_dssp -----CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTT----TSBHHHHCCCCSSSCCCHHHHTCBCEECCG
T ss_pred CCcCCCCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhc----CCChhHhcccccccccccccccceEEeCCH
Confidence 5544 579999999 699999999988888 99999999876542 2222222210 10111 122
Q ss_pred HHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEE-e--------cCCC---CCHHHHHHHHHHHHhC-CCeEEEE
Q 017143 67 QELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLV-E--------KPLC---TTVADCKKVVDAARKR-PDILVQV 133 (376)
Q Consensus 67 ~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~-E--------KP~a---~~~~e~~~l~~~a~~~-~~~~~~v 133 (376)
++ + .++|+|+.|+|+....+++.++++ +|..|+- - -|.. .+.++.+.+...-+++ .+-.+..
T Consensus 75 ~~-~--~~vDvvf~a~p~~~s~~~a~~~~~--~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIa 149 (359)
T 4dpk_A 75 KL-M--DDVDIIFSPLPQGAAGPVEEQFAK--EGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVT 149 (359)
T ss_dssp GG-C--TTCCEEEECCCTTTHHHHHHHHHH--TTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEE
T ss_pred HH-h--cCCCEEEECCChHHHHHHHHHHHH--CCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEE
Confidence 22 3 359999999999999999999999 7776654 1 2322 2333332222211011 0123444
Q ss_pred eeccccCHHHHHHHHHHHc
Q 017143 134 GLEYRYMPPVAKLIQIVKS 152 (376)
Q Consensus 134 ~~~~r~~p~~~~~k~~i~~ 152 (376)
+-++.-......++-+.+.
T Consensus 150 nPgC~tt~~~l~L~PL~~~ 168 (359)
T 4dpk_A 150 TPLCTAQGAAIPLGAIFKD 168 (359)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHh
Confidence 5555445556666777765
No 147
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.99 E-value=2.1e-05 Score=70.18 Aligned_cols=104 Identities=17% Similarity=0.143 Sum_probs=68.5
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc--EEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV--SVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~--~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
.||+|||+|.||..+...+... +. +|+ ++|+++++.+ . +.++|+....++++++++.+ +.|+|++|+|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~---g~~~~V~-~~d~~~~~~~---~-~~~~g~~~~~~~~~~~~~~~-~aDvVilavp~ 72 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS---GFKGKIY-GYDINPESIS---K-AVDLGIIDEGTTSIAKVEDF-SPDFVMLSSPV 72 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT---TCCSEEE-EECSCHHHHH---H-HHHTTSCSEEESCGGGGGGT-CCSEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhc---CCCcEEE-EEeCCHHHHH---H-HHHCCCcccccCCHHHHhcC-CCCEEEEcCCH
Confidence 5899999999999998888775 44 655 6899987433 3 23556531246788888872 38999999999
Q ss_pred CccHHHHHHH---HcCCCCCeEEEecCCCCCHHHHHHHHHHH
Q 017143 85 MTHYQILMDI---INHPKPHHVLVEKPLCTTVADCKKVVDAA 123 (376)
Q Consensus 85 ~~h~~~~~~a---l~~~~g~~Vl~EKP~a~~~~e~~~l~~~a 123 (376)
..+.+++.+. ++ .+. +++.-- .......+.|.+..
T Consensus 73 ~~~~~v~~~l~~~l~--~~~-iv~~~~-~~~~~~~~~l~~~l 110 (281)
T 2g5c_A 73 RTFREIAKKLSYILS--EDA-TVTDQG-SVKGKLVYDLENIL 110 (281)
T ss_dssp HHHHHHHHHHHHHSC--TTC-EEEECC-SCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCC--CCc-EEEECC-CCcHHHHHHHHHhc
Confidence 9877776554 34 443 555432 22233344455544
No 148
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=97.99 E-value=7.4e-05 Score=71.62 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=53.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHH------------HHHh---cCCCCCccCCHHHHh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALK------------LANA---FDWPLKVFPGHQELL 70 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~------------~~~~---~~~~~~~~~~~~~~l 70 (376)
++||+|||+|.+|..+...+++.. ++.+|+ ++|+++++.+...+ +.++ .+ +..++++++++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g-~G~~V~-~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~--~~~t~~~~e~~ 80 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMC-PEIRVT-VVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKN--LFFSTNIDDAI 80 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHC-TTSEEE-EECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTT--EEEESCHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcC-CCCEEE-EEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCC--EEEECCHHHHH
Confidence 579999999999999888887751 367866 57999885443210 1111 12 23567888888
Q ss_pred hCCCCCEEEEeCCCCcc
Q 017143 71 DSGLCDVVVVSTPNMTH 87 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~~h 87 (376)
++ .|+|++|+|+..+
T Consensus 81 ~~--aDvViiaVptp~~ 95 (467)
T 2q3e_A 81 KE--ADLVFISVNTPTK 95 (467)
T ss_dssp HH--CSEEEECCCCCBC
T ss_pred hc--CCEEEEEcCCchh
Confidence 76 8999999887654
No 149
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.96 E-value=1.5e-05 Score=70.28 Aligned_cols=74 Identities=19% Similarity=0.346 Sum_probs=57.2
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCC---cEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQG---VSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~---~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+++||+|||+|.||..+...+.+. .. .+| .++|+++++ +|+ ..+++.++++++ .|+|+++
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v-~~~~~~~~~----------~g~--~~~~~~~~~~~~--~D~vi~~ 65 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANA--NIIKKENL-FYYGPSKKN----------TTL--NYMSSNEELARH--CDIIVCA 65 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHH--TSSCGGGE-EEECSSCCS----------SSS--EECSCHHHHHHH--CSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCCCCCeE-EEEeCCccc----------Cce--EEeCCHHHHHhc--CCEEEEE
Confidence 357999999999999988888775 21 454 578998873 465 467889888876 8999999
Q ss_pred CCCCccHHHHHHHH
Q 017143 82 TPNMTHYQILMDII 95 (376)
Q Consensus 82 t~~~~h~~~~~~al 95 (376)
+|+....+++.+..
T Consensus 66 v~~~~~~~v~~~l~ 79 (262)
T 2rcy_A 66 VKPDIAGSVLNNIK 79 (262)
T ss_dssp SCTTTHHHHHHHSG
T ss_pred eCHHHHHHHHHHHH
Confidence 99887777766544
No 150
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.95 E-value=5.5e-05 Score=68.86 Aligned_cols=80 Identities=18% Similarity=0.274 Sum_probs=57.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCC----cEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQG----VSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~----~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
+++||+|||+|.||......|.+. + .+|+ +++++++. ++++++. ++|+. ..++..+++.. .|+|++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~---G~~~~~~V~-v~~r~~~~-~~~~~l~-~~G~~--~~~~~~e~~~~--aDvVil 90 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA---GVLAAHKIM-ASSPDMDL-ATVSALR-KMGVK--LTPHNKETVQH--SDVLFL 90 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT---TSSCGGGEE-EECSCTTS-HHHHHHH-HHTCE--EESCHHHHHHH--CSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCCCcceEE-EECCCccH-HHHHHHH-HcCCE--EeCChHHHhcc--CCEEEE
Confidence 457999999999999988888775 4 5654 78998751 0233333 45754 67788888876 899999
Q ss_pred eCCCCccHHHHHHH
Q 017143 81 STPNMTHYQILMDI 94 (376)
Q Consensus 81 ~t~~~~h~~~~~~a 94 (376)
|+|++.-.+++.+.
T Consensus 91 av~~~~~~~vl~~l 104 (322)
T 2izz_A 91 AVKPHIIPFILDEI 104 (322)
T ss_dssp CSCGGGHHHHHHHH
T ss_pred EeCHHHHHHHHHHH
Confidence 99976555555443
No 151
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=97.93 E-value=0.00034 Score=63.28 Aligned_cols=210 Identities=17% Similarity=0.189 Sum_probs=132.3
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeC-C-ChhhHHHHHHHHHhcCCCC--------------Ccc---CC
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIAD-P-HLQSRQQALKLANAFDWPL--------------KVF---PG 65 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d-~-~~~~~~~~~~~~~~~~~~~--------------~~~---~~ 65 (376)
|.||.|+| +|.||..-+.-+++++ ..|+|++++. . +-+ ...+.+++|+-.. +++ +.
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aLaa~g~nv~---~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~G~~~ 96 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNP-DRFEVVGLAAGGAHLD---TLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDA 96 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEECSSCHH---HHHHHHHHHCCCCEEESCHHHHHHHCCCSEESTTH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCC-CceEEEEEEecCCCHH---HHHHHHHHcCCCEEEEcCHHHhhhcCCEEEecHHH
Confidence 46899999 5999999998888872 4599999987 3 333 4555555655331 111 22
Q ss_pred HHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHH-HHHHHhCCCeEEEEeeccccCHHHH
Q 017143 66 HQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKV-VDAARKRPDILVQVGLEYRYMPPVA 144 (376)
Q Consensus 66 ~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l-~~~a~~~~~~~~~v~~~~r~~p~~~ 144 (376)
+.++...+++|.|+.+..-..=....++|++ +||.|.+.-- .++--+-+| .+++ ++++ .+ --+....
T Consensus 97 l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~--aGK~iaLANK--EsLV~aG~lv~~~a-~~~~-il------PVDSEHs 164 (398)
T 2y1e_A 97 ATRLVEQTEADVVLNALVGALGLRPTLAALK--TGARLALANK--ESLVAGGSLVLRAA-RPGQ-IV------PVDSEHS 164 (398)
T ss_dssp HHHHHHHSCCSEEEECCCSGGGHHHHHHHHH--HTCEEEECCH--HHHHHHTHHHHHHC-CTTC-EE------ECSHHHH
T ss_pred HHHHhcCCCCCEEEEeCcCHHHHHHHHHHHH--CCCceEEccc--chheecHHHHHHHH-HHcC-ce------EecchHh
Confidence 4556656779999999999888999999999 8999987432 123333334 4445 5545 22 2245556
Q ss_pred HHHHHHHcCCCCceEEEEEeeccCCcccc---------------cCccccccccC--CcccccccccHHHHHHHHhCCCC
Q 017143 145 KLIQIVKSGSIGQVKMVAIREHRFPFLVK---------------VNDWNRFNENT--GGTLVEKCCHFFDLMRLFVGSNP 207 (376)
Q Consensus 145 ~~k~~i~~g~iG~i~~~~~~~~~~~~~~~---------------~~~w~~~~~~~--gG~l~d~g~H~ld~~~~l~G~~~ 207 (376)
.+-|.+..+...+|..+...-..+++... -++|..-++-+ +-.|++-|--.|. +.||||-++
T Consensus 165 AIfQ~L~g~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmNKGLEvIE-A~~LF~~~~ 243 (398)
T 2y1e_A 165 ALAQCLRGGTPDEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIE-THLLFGIPY 243 (398)
T ss_dssp HHHHHGGGSCGGGEEEEEEEECCCTTTTCCHHHHTTCCTTTC-------CCHHHHHHHHHSHHHHHHHHH-HHHHHCCCG
T ss_pred HHHHHhCCCCcccccEEEEECCccccCCCCHHHHhCCCHHHHhhCCCcccCceeeehhHhHhhhhHHHHH-HHHHcCCCH
Confidence 66666665555678888877666665431 24554332211 1233443333232 689999877
Q ss_pred eEEEEecccccccCccccCCCCCcccccEEEEEEecCCcEE
Q 017143 208 MRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENGSRG 248 (376)
Q Consensus 208 ~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~ 248 (376)
.++....+. ....+.+++|.||.+.
T Consensus 244 d~I~VvVHP----------------QSiIHSmVef~DGSv~ 268 (398)
T 2y1e_A 244 DRIDVVVHP----------------QSIIHSMVTFIDGSTI 268 (398)
T ss_dssp GGEEEEECT----------------TCCEEEEEEETTSCEE
T ss_pred HHeEEEECC----------------CCceeEEEEEeCCcEE
Confidence 777776543 2458899999999764
No 152
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.90 E-value=0.0001 Score=65.74 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=66.3
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHH--------hc-CCC----------CCccCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLAN--------AF-DWP----------LKVFPG 65 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~--------~~-~~~----------~~~~~~ 65 (376)
+..||+|||+|.||......++.. +++|+ ++|+++++++++.+..+ +. ++. +...++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~---G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~ 78 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFH---GFAVT-AYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDD 78 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCC
Confidence 356899999999999988888775 78866 68999986655443210 00 110 135688
Q ss_pred HHHHhhCCCCCEEEEeCCCC--ccHHHHHHHHcCCCCCeEEEecCCCCCHHH
Q 017143 66 HQELLDSGLCDVVVVSTPNM--THYQILMDIINHPKPHHVLVEKPLCTTVAD 115 (376)
Q Consensus 66 ~~~~l~~~~~D~V~i~t~~~--~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e 115 (376)
+++++++ .|+|++++|.. ....+..+..+......|++.---+.+..+
T Consensus 79 ~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~ 128 (283)
T 4e12_A 79 LAQAVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSD 128 (283)
T ss_dssp HHHHTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH
T ss_pred HHHHhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHH
Confidence 8888876 89999999987 434443333221012345654444445443
No 153
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.00016 Score=69.65 Aligned_cols=114 Identities=14% Similarity=0.234 Sum_probs=78.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHH-h---cCCCCCccCCHHHHhhC-CCCCEEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLAN-A---FDWPLKVFPGHQELLDS-GLCDVVVV 80 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~l~~-~~~D~V~i 80 (376)
..+|||||+|.||......|.+. +++|+ ++|++++ +++++.+ + .|+ ..+.|++++++. .++|+|++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~---G~~V~-v~dr~~~---~~~~l~~~~~~~~gi--~~~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH---GFTVC-AYNRTQS---KVDHFLANEAKGKSI--IGATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT---TCCEE-EECSSSH---HHHHHHHTTTTTSSE--ECCSSHHHHHHTSCSSCEEEE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC---CCEEE-EEeCCHH---HHHHHHcccccCCCe--EEeCCHHHHHhcCCCCCEEEE
Confidence 46899999999999999888875 67764 7999998 4555554 3 354 467899998875 34899999
Q ss_pred eCCCCccHHHHHHHHc-CC-CCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEE
Q 017143 81 STPNMTHYQILMDIIN-HP-KPHHVLVEKPLCTTVADCKKVVDAARKRPDILV 131 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~-~~-~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~ 131 (376)
++|+....+-+.+.+. .- .| .+++.-- .....+..++.+...++ ++.+
T Consensus 81 ~Vp~~~~v~~vl~~l~~~l~~g-~iIId~s-~~~~~~~~~l~~~l~~~-g~~~ 130 (497)
T 2p4q_A 81 LVKAGAPVDALINQIVPLLEKG-DIIIDGG-NSHFPDSNRRYEELKKK-GILF 130 (497)
T ss_dssp CCCSSHHHHHHHHHHGGGCCTT-CEEEECS-CCCHHHHHHHHHHHHHT-TCEE
T ss_pred EcCChHHHHHHHHHHHHhCCCC-CEEEECC-CCChhHHHHHHHHHHHc-CCce
Confidence 9999765554444332 10 34 4566532 44666777777777444 6544
No 154
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=97.89 E-value=2.2e-05 Score=71.63 Aligned_cols=98 Identities=23% Similarity=0.214 Sum_probs=67.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhh---hcCCCcEEEEEeCC-ChhhHHHHHHHHH---hcCC-----------------CCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHH---LRSQGVSVVCIADP-HLQSRQQALKLAN---AFDW-----------------PLK 61 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~---~~~~~~~~~~v~d~-~~~~~~~~~~~~~---~~~~-----------------~~~ 61 (376)
++||||+|.|.+|+..++.+.. . +++++++|.++ +++ ....+.+ -+|- ++.
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~--~~~eivai~~~~~~~---~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~ 76 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRR--AEITVVAINELADAA---GMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIR 76 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGG--GTEEEEEEECSSCHH---HHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCC--CCEEEEEEeCCCCHH---HHHHHhcccccCCCCCceEEEcCCeeEECCEEEE
Confidence 4899999999999999999887 6 89999999997 333 2222221 1110 011
Q ss_pred cc--CCHHHHh-hCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCC
Q 017143 62 VF--PGHQELL-DSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPL 109 (376)
Q Consensus 62 ~~--~~~~~~l-~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~ 109 (376)
++ .+.+++. .+.++|+|+-|||.....+.+.+.+++| -|-|++.-|.
T Consensus 77 v~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~G-akkVVId~~a 126 (339)
T 2x5j_O 77 VLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAG-AKKVLFSHPG 126 (339)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTT-CSEEEESSCC
T ss_pred EEecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcC-CCEEEEeccc
Confidence 22 2334432 1125899999999999999999999943 2458888776
No 155
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.88 E-value=9.9e-05 Score=69.44 Aligned_cols=133 Identities=15% Similarity=0.237 Sum_probs=82.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHH------------HHHh--cCCCCCccCCHHHHhh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALK------------LANA--FDWPLKVFPGHQELLD 71 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~l~ 71 (376)
++||+|||+|.+|......+++ +.+|+ ++|+++++.+...+ +..+ .+ +...+|++++++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~----G~~V~-~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~--l~~ttd~~ea~~ 108 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ----NHEVV-ALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLN--FRATTDKHDAYR 108 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT----TSEEE-EECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCC--EEEESCHHHHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHc----CCeEE-EEecCHHHhhHHhccCCccccccHHHHHhhccCC--eEEEcCHHHHHh
Confidence 5799999999999987766653 57876 58999985443322 0001 12 246678888887
Q ss_pred CCCCCEEEEeCCCCcc----------HHH----HHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCe--------
Q 017143 72 SGLCDVVVVSTPNMTH----------YQI----LMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDI-------- 129 (376)
Q Consensus 72 ~~~~D~V~i~t~~~~h----------~~~----~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~-------- 129 (376)
+ .|+|++|+|+... ..- +.. ++ .|.-| +.|- +..+.-++++.+.. ...++
T Consensus 109 ~--aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~--~g~iV-V~~S-Tv~pgtt~~l~~~l-~~~~v~~sPe~~~ 180 (432)
T 3pid_A 109 N--ADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-IN--PNAVM-IIKS-TIPVGFTRDIKERL-GIDNVIFSPEFLR 180 (432)
T ss_dssp T--CSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HC--TTSEE-EECS-CCCTTHHHHHHHHH-TCCCEEECCCCCC
T ss_pred C--CCEEEEeCCCccccccccccHHHHHHHHHHHHh-cC--CCcEE-EEeC-CCChHHHHHHHHHH-hhccEeecCccCC
Confidence 6 8999999998742 221 223 56 56544 5543 34555566666666 33232
Q ss_pred ------------EEEEeeccccCHHHHHHHHHHHcCCCC
Q 017143 130 ------------LVQVGLEYRYMPPVAKLIQIVKSGSIG 156 (376)
Q Consensus 130 ------------~~~v~~~~r~~p~~~~~k~~i~~g~iG 156 (376)
.+++|-. .+....++.++..+.++
T Consensus 181 ~G~A~~~~l~p~rIvvG~~---~~~~~~~~~ll~~~~~~ 216 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGER---SARAERFADLLKEGAIK 216 (432)
T ss_dssp TTSHHHHHHSCSCEEESSC---SHHHHHHHHHHHHHCSS
T ss_pred cchhhhcccCCceEEecCC---HHHHHHHHHHHHhhhcc
Confidence 3444433 34567777777765443
No 156
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.88 E-value=5.4e-05 Score=71.95 Aligned_cols=71 Identities=15% Similarity=0.134 Sum_probs=53.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHh------------------cCCCCCccCCHHH
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANA------------------FDWPLKVFPGHQE 68 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ 68 (376)
+||+|||+|.+|..+...+++. +.+|+ ++|+++++. +++.+. .|- +..++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~---G~~V~-~~d~~~~~~---~~l~~~~~~i~e~~l~~~~~~~~~~g~-l~~t~~~~~ 72 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR---GHEVI-GVDVSSTKI---DLINQGKSPIVEPGLEALLQQGRQTGR-LSGTTDFKK 72 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEE-EECSCHHHH---HHHHTTCCSSCCTTHHHHHHHHHHTTC-EEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEE-EEECCHHHH---HHHhCCCCCcCCCCHHHHHHhhcccCc-eEEeCCHHH
Confidence 4899999999999988888875 67865 579998854 344331 121 235678888
Q ss_pred HhhCCCCCEEEEeCCCCcc
Q 017143 69 LLDSGLCDVVVVSTPNMTH 87 (376)
Q Consensus 69 ~l~~~~~D~V~i~t~~~~h 87 (376)
++++ .|+|+||+|+..+
T Consensus 73 ~~~~--aDvviiaVptp~~ 89 (436)
T 1mv8_A 73 AVLD--SDVSFICVGTPSK 89 (436)
T ss_dssp HHHT--CSEEEECCCCCBC
T ss_pred Hhcc--CCEEEEEcCCCcc
Confidence 8876 8999999998775
No 157
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.86 E-value=8.1e-05 Score=67.50 Aligned_cols=81 Identities=17% Similarity=0.155 Sum_probs=55.5
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHH-------HhcCCC------------CC
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLA-------NAFDWP------------LK 61 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~-------~~~~~~------------~~ 61 (376)
|+.+...||+|||+|.||......+++. +++|+ ++|++++..+++.+.. .+.|+- +.
T Consensus 1 m~~~~~~kI~vIGaG~MG~~iA~~la~~---G~~V~-l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~ 76 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASG---GFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLIS 76 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHT---TCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEE
T ss_pred CCCCCCceEEEEeeCHHHHHHHHHHHHC---CCEEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceE
Confidence 7667678999999999999988888775 78866 6899998665553211 112311 13
Q ss_pred ccCCHHHHhhCCCCCEEEEeCCCCcc
Q 017143 62 VFPGHQELLDSGLCDVVVVSTPNMTH 87 (376)
Q Consensus 62 ~~~~~~~~l~~~~~D~V~i~t~~~~h 87 (376)
..+|+++++++ .|+|+.|+|....
T Consensus 77 ~~~~~~eav~~--aDlVieavpe~~~ 100 (319)
T 2dpo_A 77 SCTNLAEAVEG--VVHIQECVPENLD 100 (319)
T ss_dssp EECCHHHHTTT--EEEEEECCCSCHH
T ss_pred EeCCHHHHHhc--CCEEEEeccCCHH
Confidence 56889998876 8999999998754
No 158
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.82 E-value=2.8e-05 Score=71.05 Aligned_cols=102 Identities=22% Similarity=0.185 Sum_probs=66.5
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeC-CC-hhhHHHHHHHHHhcCC-----------------CCCccC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIAD-PH-LQSRQQALKLANAFDW-----------------PLKVFP 64 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d-~~-~~~~~~~~~~~~~~~~-----------------~~~~~~ 64 (376)
++++||||+|.|.+|+..++.+... ++++|++|.| .. .+......+..+-+|. ++..+.
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~--p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~ 92 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMER--NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQ 92 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTC--SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEEC
T ss_pred CcceEEEEECCCHHHHHHHHHHHcC--CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEe
Confidence 3578999999999999999998887 8999999999 32 2211111111111210 011222
Q ss_pred --CHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCC-CeEEEecCC
Q 017143 65 --GHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKP-HHVLVEKPL 109 (376)
Q Consensus 65 --~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g-~~Vl~EKP~ 109 (376)
+.+++.. +.++|+|+-|||.....+.+.+.++ +| |-|++.-|.
T Consensus 93 ~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~--~GakkvVId~pa 139 (354)
T 3cps_A 93 AKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLK--GGAKKVIISAPP 139 (354)
T ss_dssp CSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGT--TTCSEEEESSCC
T ss_pred cCChHHCCcccCCCCEEEECCCchhhHHHHHHHHH--cCCcEEEEeCCC
Confidence 3444321 1258999999999999999999999 55 348887775
No 159
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.82 E-value=0.00013 Score=57.34 Aligned_cols=82 Identities=17% Similarity=0.093 Sum_probs=53.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--CccCCHHHHhh--CCCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVFPGHQELLD--SGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~--~~~~D~V~i~ 81 (376)
.++|+|+|+|.+|...+..|.+. +.+++ ++|++++ .++++.+++++.. .-..+.+.+.+ -.+.|+|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~---g~~v~-~~d~~~~---~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK---GHDIV-LIDIDKD---ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESCHH---HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCeEE-EEECCHH---HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 47999999999999998888775 67766 5688877 4555555556531 11234444332 2358999999
Q ss_pred CCCCccHHHHHHH
Q 017143 82 TPNMTHYQILMDI 94 (376)
Q Consensus 82 t~~~~h~~~~~~a 94 (376)
+|+...-..+..+
T Consensus 77 ~~~~~~~~~~~~~ 89 (140)
T 1lss_A 77 TGKEEVNLMSSLL 89 (140)
T ss_dssp CSCHHHHHHHHHH
T ss_pred eCCchHHHHHHHH
Confidence 9986444433333
No 160
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.80 E-value=4.2e-05 Score=70.99 Aligned_cols=78 Identities=9% Similarity=0.099 Sum_probs=54.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc-------C--C--CCCccCCHHHHhhCCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF-------D--W--PLKVFPGHQELLDSGLC 75 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~-------~--~--~~~~~~~~~~~l~~~~~ 75 (376)
+||+|||+|.||......|.+. +.+|+ ++++++++ ++.+.+.. + + .+...++.++++.+ .
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~---G~~V~-~~~r~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a 86 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK---CREVC-VWHMNEEE---VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNG--A 86 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT---EEEEE-EECSCHHH---HHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTT--C
T ss_pred CeEEEECCCHHHHHHHHHHHhC---CCEEE-EEECCHHH---HHHHHHcCcccccccccccccceeeeCCHHHHHcC--C
Confidence 3999999999999988888764 66755 68998874 44444331 1 1 12345788888765 8
Q ss_pred CEEEEeCCCCccHHHHHH
Q 017143 76 DVVVVSTPNMTHYQILMD 93 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~ 93 (376)
|+|++++|+....+++..
T Consensus 87 DvVilav~~~~~~~v~~~ 104 (366)
T 1evy_A 87 EIILFVIPTQFLRGFFEK 104 (366)
T ss_dssp SSEEECCCHHHHHHHHHH
T ss_pred CEEEECCChHHHHHHHHH
Confidence 999999998655555433
No 161
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.77 E-value=0.00017 Score=68.38 Aligned_cols=106 Identities=20% Similarity=0.194 Sum_probs=69.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC-----------------CCCCccCCHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD-----------------WPLKVFPGHQE 68 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~ 68 (376)
.+||+|||+|.||......|++. +.+|+ ++|+++++. +++.+... -.++..+|+++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~---G~~V~-~~D~~~~kv---~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~e 80 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF---GHEVV-CVDKDARKI---ELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAE 80 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCSTTH---HHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHH
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC---CCEEE-EEeCCHHHH---HHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHH
Confidence 58999999999999988888875 78877 589999854 44433210 00235678888
Q ss_pred HhhCCCCCEEEEeCCCCc----------cHHHHHH----HHcCCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 017143 69 LLDSGLCDVVVVSTPNMT----------HYQILMD----IINHPKPHHVLVEKPLCTTVADCKKVVDAAR 124 (376)
Q Consensus 69 ~l~~~~~D~V~i~t~~~~----------h~~~~~~----al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~ 124 (376)
.+++ .|+|+||.|+.. +..-+.+ .++ .|. +++.|- +..+..++++.+...
T Consensus 81 a~~~--aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~--~g~-iVV~~S-Tv~pgtt~~l~~~l~ 144 (446)
T 4a7p_A 81 GVKD--ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLT--KPS-VIVTKS-TVPVGTGDEVERIIA 144 (446)
T ss_dssp HHTT--CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCC--SCC-EEEECS-CCCTTHHHHHHHHHH
T ss_pred HHhc--CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcC--CCC-EEEEeC-CCCchHHHHHHHHHH
Confidence 8876 899999977654 2333222 344 454 455554 555555566655553
No 162
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=97.76 E-value=7.5e-05 Score=68.01 Aligned_cols=104 Identities=19% Similarity=0.206 Sum_probs=68.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-ChhhHHHHHHHHHhcCC-----------------CCCc--cCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HLQSRQQALKLANAFDW-----------------PLKV--FPG 65 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~~~~~~~~~~~~~~~~-----------------~~~~--~~~ 65 (376)
++||||+|.|.+|+..++.+.+...+++++++|.|+ +++......+.-+.+|- ++.+ ..+
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 489999999999999998887642368999999987 33321111111111210 0111 224
Q ss_pred HHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 66 HQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 66 ~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.+++.. +.++|+|+-||+...-.+.+.+.+++| -|-|++.-|..
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~G-akkVVId~~~~ 126 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAG-AKKVLITAPGK 126 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTT-CSEEEESSCCB
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHHcC-CcEEEEeCCCC
Confidence 455532 236999999999999999999999944 24577776654
No 163
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=97.75 E-value=0.0012 Score=60.14 Aligned_cols=213 Identities=13% Similarity=0.166 Sum_probs=132.0
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-----------------------CC
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-----------------------LK 61 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-----------------------~~ 61 (376)
+-+|.|+| +|.||..-+.-+++++ ..|+|++++..+. .+...+.+++|+-. +.
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aL~ag~n--v~~L~~q~~~f~p~~v~v~d~~~~~~L~~~l~~~~~~~~ 85 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNP-EHFRVVALVAGKN--VTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTE 85 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT-TTEEEEEEEESSC--HHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCE
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCC-CccEEEEEEcCCC--HHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhcCCCCcE
Confidence 56999999 5999999998888872 4599999986432 22444444444422 11
Q ss_pred ccC---CHHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHH-HHHHHHHHhCCCeEEEEeecc
Q 017143 62 VFP---GHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADC-KKVVDAARKRPDILVQVGLEY 137 (376)
Q Consensus 62 ~~~---~~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~-~~l~~~a~~~~~~~~~v~~~~ 137 (376)
++. .+.++...+++|.|+.+..-..=....+.|++ +||.|.+.--= ++--+ .-+.+++++ ++..+..-
T Consensus 86 v~~G~~~l~~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~--aGK~iaLANKE--sLV~aG~lv~~~a~~-~~~~ilPV--- 157 (406)
T 1q0q_A 86 VLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIR--AGKTILLANKE--SLVTCGRLFMDAVKQ-SKAQLLPV--- 157 (406)
T ss_dssp EEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHH--TTCEEEECCHH--HHHHHTHHHHHHHHH-HTCEEEEC---
T ss_pred EEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHH--CCCeEEEechH--HHHhchHHHHHHHHH-cCCeEEEe---
Confidence 211 13344445679999999998888999999999 89999874321 22222 334555634 46555433
Q ss_pred ccCHHHHHHHHHH----HcC------CCCceEEEEEeeccCCcccc---------------cCccccccccC--Cccccc
Q 017143 138 RYMPPVAKLIQIV----KSG------SIGQVKMVAIREHRFPFLVK---------------VNDWNRFNENT--GGTLVE 190 (376)
Q Consensus 138 r~~p~~~~~k~~i----~~g------~iG~i~~~~~~~~~~~~~~~---------------~~~w~~~~~~~--gG~l~d 190 (376)
+.....+-|.+ ... ...+|..+..+-..+++... -++|..-++-+ +-.|++
T Consensus 158 --DSEHsAIfQ~L~~~~~g~~~~~~~~~~~V~kiiLTASGGPFR~~~~e~L~~vT~eqAl~HPnWsMG~KITIDSATmmN 235 (406)
T 1q0q_A 158 --DSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMN 235 (406)
T ss_dssp --SHHHHHHHHTSCHHHHTTTTTSCTGGGTEEEEEEEECCCTTTTSCGGGGGGCCHHHHHCCSSCCCCHHHHHHHHHTHH
T ss_pred --cchHHHHHHHcccccCCccccccCCcccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCCeeeehHHhHHh
Confidence 34444555555 332 22457777776666665432 25665443321 223444
Q ss_pred ccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecCCcEE
Q 017143 191 KCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENGSRG 248 (376)
Q Consensus 191 ~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~ 248 (376)
-|--.|. +.||||-++.++....+. ....+.+++|.||.+.
T Consensus 236 KGLEvIE-A~~LF~~~~d~I~VvVHP----------------QSiIHSmVef~DGSv~ 276 (406)
T 1q0q_A 236 KGLEYIE-ARWLFNASASQMEVLIHP----------------QSVIHSMVRYQDGSVL 276 (406)
T ss_dssp HHHHHHH-HHHHHTCCGGGEEEEECT----------------TCCEEEEEEETTSCEE
T ss_pred hhHHHHH-HHHHcCCCHHHeEEEECC----------------CCceeEEEEEcCCcEE
Confidence 4433333 689999877777776543 2458899999999764
No 164
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=97.74 E-value=5.1e-05 Score=68.95 Aligned_cols=98 Identities=23% Similarity=0.267 Sum_probs=68.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-ChhhHHHHHHHH---HhcC-----------------CCCCccC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HLQSRQQALKLA---NAFD-----------------WPLKVFP 64 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~~~~~~~~~~~---~~~~-----------------~~~~~~~ 64 (376)
|+||||+|.|.+|+..++.+..+ +++++++|.|. +.+ ....+. +.+| -++.++.
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~--~~veivain~~~~~~---~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~ 75 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKN--PDIEVVAVNDLTDAN---TLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKA 75 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTC--TTEEEEEEECSSCHH---HHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEEC
T ss_pred CeEEEEECCCHHHHHHHHHHhCC--CCeEEEEEeCCCCHH---HHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEe
Confidence 48999999999999999998887 89999999997 333 222222 2122 0112221
Q ss_pred --CHHHHh-hCCCCCEEEEeCCCCccHHHHHHHHcCCCC-CeEEEecCCC
Q 017143 65 --GHQELL-DSGLCDVVVVSTPNMTHYQILMDIINHPKP-HHVLVEKPLC 110 (376)
Q Consensus 65 --~~~~~l-~~~~~D~V~i~t~~~~h~~~~~~al~~~~g-~~Vl~EKP~a 110 (376)
+.+++- .+.++|+|+-|||.....+.+.+.++ +| |-|++.-|..
T Consensus 76 ~~dp~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~--~Gak~vVId~pa~ 123 (334)
T 3cmc_O 76 ERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLE--AGAKKVIISAPAK 123 (334)
T ss_dssp CSSGGGCCTGGGTCCEEEECSSSCCBHHHHTHHHH--TTCSEEEESSCCB
T ss_pred cCChhhcCcccCccCEEEECCCchhhHHHHHHHHH--CCCCEEEEeCCCc
Confidence 344431 22268999999999999999999999 54 4588877754
No 165
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=97.73 E-value=0.00015 Score=65.75 Aligned_cols=98 Identities=23% Similarity=0.258 Sum_probs=65.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-------C--------------CccC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-------L--------------KVFP 64 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-------~--------------~~~~ 64 (376)
++||||+|.|.+|+..++.+..+ ++++|++|.|..... ...-+. +|... + ..+.
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~--~~veiv~i~~~~~~~--~~a~l~-~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~ 75 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKR--SDIEIVAINDLLDAD--YMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTA 75 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSCHH--HHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred CeEEEEECcCHHHHHHHHHHHcC--CCeEEEEEcCCCChh--HHhHhh-cccccCCCCCCeEEEcCCEEEECCEEEEEEE
Confidence 48999999999999999999888 899999999974321 221111 22110 0 0121
Q ss_pred --CHHHHh-hCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCC
Q 017143 65 --GHQELL-DSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPL 109 (376)
Q Consensus 65 --~~~~~l-~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~ 109 (376)
+.+++- ...++|+|+-|||.....+.+.+.+++| -|-|.+--|+
T Consensus 76 ~~dp~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~G-akvVdlSa~~ 122 (330)
T 1gad_O 76 ERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPS 122 (330)
T ss_dssp CSSGGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCC
T ss_pred cCChhhCccccccCCEEEECCCccccHHHHHHHHHCC-CEEEEECCCC
Confidence 233331 1125899999999999999999999943 2446666555
No 166
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.73 E-value=3.1e-05 Score=66.21 Aligned_cols=68 Identities=24% Similarity=0.278 Sum_probs=50.5
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+++||+|||+|.+|..++..+.+. +.+++ +++++++ +++++.+. |+. .+ ++++++++ .|+|++++|+
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~---g~~V~-~~~r~~~---~~~~~~~~-g~~--~~-~~~~~~~~--~DvVi~av~~ 93 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS---GFKVV-VGSRNPK---RTARLFPS-AAQ--VT-FQEEAVSS--PEVIFVAVFR 93 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT---TCCEE-EEESSHH---HHHHHSBT-TSE--EE-EHHHHTTS--CSEEEECSCG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC---CCEEE-EEeCCHH---HHHHHHHc-CCc--ee-cHHHHHhC--CCEEEECCCh
Confidence 357999999999999999888775 56755 6889887 44444433 543 43 78888865 8999999997
Q ss_pred C
Q 017143 85 M 85 (376)
Q Consensus 85 ~ 85 (376)
.
T Consensus 94 ~ 94 (215)
T 2vns_A 94 E 94 (215)
T ss_dssp G
T ss_pred H
Confidence 5
No 167
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=97.73 E-value=0.00014 Score=69.66 Aligned_cols=71 Identities=20% Similarity=0.167 Sum_probs=51.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc------CC-----------CCCccCCHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF------DW-----------PLKVFPGHQE 68 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~------~~-----------~~~~~~~~~~ 68 (376)
.+||+|||+|.+|......|++. +.+|+ ++|+++++ .+++.+.. ++ .+...+|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~---G~~V~-~~d~~~~~---v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~ 80 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI---GHDVF-CLDVDQAK---IDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEA 80 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHH---HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhC---CCEEE-EEECCHHH---HHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHH
Confidence 58999999999999988888875 77866 57999884 44443321 10 0234567777
Q ss_pred HhhCCCCCEEEEeCCCC
Q 017143 69 LLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 69 ~l~~~~~D~V~i~t~~~ 85 (376)
.+++ .|+|+||+|+.
T Consensus 81 a~~~--aDvviiaVptp 95 (478)
T 2y0c_A 81 AVAH--GDVQFIAVGTP 95 (478)
T ss_dssp HHHH--CSEEEECCCCC
T ss_pred Hhhc--CCEEEEEeCCC
Confidence 7766 89999999873
No 168
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.72 E-value=5.4e-05 Score=69.20 Aligned_cols=104 Identities=16% Similarity=0.187 Sum_probs=67.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhC--CCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDS--GLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~D~V~i~t~ 83 (376)
..||+|||+|.||......+.+. +.+|+ ++|+++++.+. +.++|+. .+++.++++++ .+.|+|++|+|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~---G~~V~-~~dr~~~~~~~----a~~~G~~--~~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA---NHSVF-GYNRSRSGAKS----AVDEGFD--VSADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT---TCCEE-EECSCHHHHHH----HHHTTCC--EESCHHHHHHHHHHTTCEEEECSC
T ss_pred CCEEEEEeecHHHHHHHHHHHHC---CCEEE-EEeCCHHHHHH----HHHcCCe--eeCCHHHHHHhcccCCCEEEEeCC
Confidence 47999999999999999888875 67765 68999874332 3456764 67889888864 24799999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHH
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVD 121 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~ 121 (376)
+..-.+++.+......| .++++- .+....-.+++.+
T Consensus 78 ~~~~~~vl~~l~~~~~~-~iv~Dv-~Svk~~i~~~~~~ 113 (341)
T 3ktd_A 78 MTAIDSLLDAVHTHAPN-NGFTDV-VSVKTAVYDAVKA 113 (341)
T ss_dssp HHHHHHHHHHHHHHCTT-CCEEEC-CSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCC-CEEEEc-CCCChHHHHHHHH
Confidence 76444444332221133 455553 2334444444443
No 169
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.70 E-value=6.9e-05 Score=68.63 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=60.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC-C-------CCCccCCHHHHhhCCCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD-W-------PLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~l~~~~~D 76 (376)
+++||+|||+|.||......|.+. +.+|+ +++++++ +++.+.++.- . .+..+++.++ +.. .|
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~---G~~V~-~~~r~~~---~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~--aD 82 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN---GEEVI-LWARRKE---IVDLINVSHTSPYVEESKITVRATNDLEE-IKK--ED 82 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSHH---HHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCT--TE
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC---CCeEE-EEeCCHH---HHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcC--CC
Confidence 368999999999999988888775 66754 7899887 4555554420 0 1235677777 554 89
Q ss_pred EEEEeCCCCccHHHHHHHHcCCCCCe-EEEecCCC
Q 017143 77 VVVVSTPNMTHYQILMDIINHPKPHH-VLVEKPLC 110 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~g~~-Vl~EKP~a 110 (376)
+|++++|+.. .+-+.+.+.. .++. |.+-|.+.
T Consensus 83 vVil~vk~~~-~~~v~~~l~~-~~~~vv~~~nGi~ 115 (335)
T 1z82_A 83 ILVIAIPVQY-IREHLLRLPV-KPSMVLNLSKGIE 115 (335)
T ss_dssp EEEECSCGGG-HHHHHTTCSS-CCSEEEECCCCCC
T ss_pred EEEEECCHHH-HHHHHHHhCc-CCCEEEEEeCCCC
Confidence 9999999744 3333333431 2333 33455443
No 170
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.69 E-value=0.00011 Score=67.67 Aligned_cols=97 Identities=14% Similarity=0.204 Sum_probs=64.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc-------CC--C--CCccCCHHHHhhCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF-------DW--P--LKVFPGHQELLDSGL 74 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~-------~~--~--~~~~~~~~~~l~~~~ 74 (376)
++||+|||+|.||......|.+. +.+|+ +++++++. ++++.+.. ++ + +..++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~---G~~V~-l~~r~~~~---~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~-- 99 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK---GQKVR-LWSYESDH---VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEG-- 99 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT---TCCEE-EECSCHHH---HHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTT--
T ss_pred CCeEEEECccHHHHHHHHHHHHC---CCeEE-EEeCCHHH---HHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhc--
Confidence 57999999999999988888775 66755 78999884 44444321 11 1 2345788888876
Q ss_pred CCEEEEeCCCCccHHHHHHHHcCC-CCCe-EEEecCCCC
Q 017143 75 CDVVVVSTPNMTHYQILMDIINHP-KPHH-VLVEKPLCT 111 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~al~~~-~g~~-Vl~EKP~a~ 111 (376)
.|+|++++|++.-.+.+.+....- .+.. |.+-|.+..
T Consensus 100 aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 100 VTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp CCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBT
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCc
Confidence 899999999875555554432210 3333 444665543
No 171
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=97.65 E-value=0.0011 Score=61.17 Aligned_cols=217 Identities=13% Similarity=0.105 Sum_probs=126.2
Q ss_pred CCceeEEEEe-CChhhHHHHHHhhhhc--CCCcEEEEEeCCChhhHHHHHHHHHhcCCC-C-------------------
Q 017143 4 NDTVKYGIIG-MGMMGREHFINLHHLR--SQGVSVVCIADPHLQSRQQALKLANAFDWP-L------------------- 60 (376)
Q Consensus 4 ~~~~~v~iiG-~G~~g~~~~~~~~~~~--~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~------------------- 60 (376)
++|.||.|+| +|.||..-+.-+++++ +..|+|+|++..+. .+...+.+++|+-. +
T Consensus 75 ~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~N--v~lL~eQ~~ef~P~~v~v~d~~~~~~L~~~l~~~~ 152 (488)
T 3au8_A 75 KKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKS--VNELYEQAREFLPEYLCIHDKSVYEELKELVKNIK 152 (488)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSC--HHHHHHHHHHHCCSEEEESCGGGTHHHHTGGGGST
T ss_pred hcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCC--HHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhhhc
Confidence 3457899999 5999999888888731 24699999886432 22455555555432 0
Q ss_pred ----Ccc---CCHHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHH-HHHHHHHHhCCCeEEE
Q 017143 61 ----KVF---PGHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADC-KKVVDAARKRPDILVQ 132 (376)
Q Consensus 61 ----~~~---~~~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~-~~l~~~a~~~~~~~~~ 132 (376)
.++ +.+.++...+++|.|+.+..-..=....++|++ +||.|.+.--= ++--+ .-+.+++++..+..+.
T Consensus 153 ~~~~~v~~G~egl~e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~--aGK~IALANKE--SLV~aG~Lv~~~a~~~~g~~Il 228 (488)
T 3au8_A 153 DYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIM--NNKIVALANKE--SIVSAGFFLKKLLNIHKNAKII 228 (488)
T ss_dssp TCCCEEEEHHHHHHHHHHCTTCCEEEECCCHHHHHHHHHHHHH--TTCEEEECCSH--HHHHHHHHHHHHHHHSTTCEEE
T ss_pred CCCceEEeCHHHHHHHhcCCCCCEEEEccccHhHHHHHHHHHH--CCCcEEEecch--hhhhchHHHHHHHHhcCCCeEE
Confidence 011 113344445679999999988888889999999 89999875432 23333 3344555333155554
Q ss_pred EeeccccCHHHHHHHHHHHcC-------------CCCceEEEEEeeccCCcccc---------------cCccccccccC
Q 017143 133 VGLEYRYMPPVAKLIQIVKSG-------------SIGQVKMVAIREHRFPFLVK---------------VNDWNRFNENT 184 (376)
Q Consensus 133 v~~~~r~~p~~~~~k~~i~~g-------------~iG~i~~~~~~~~~~~~~~~---------------~~~w~~~~~~~ 184 (376)
.- +.....+-|.+..+ ...+|..+..+-..+|+... -++|..-.+-+
T Consensus 229 PV-----DSEHsAIFQcL~g~~~~~~~~~~~~~~~~~~V~kIiLTASGGPFR~~~~eeL~~VTpeqALkHPnWsMG~KIT 303 (488)
T 3au8_A 229 PV-----DSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKIT 303 (488)
T ss_dssp EC-----SHHHHHHHHHSCHHHHTTSCTTCTTHHHHTTEEEEEEEECCCTTTTCCHHHHTTCCTTTC---------CHHH
T ss_pred Ee-----chhHHHHHHHhcCCcccccccccccccccccccEEEEECCCcccCCCCHHHHhCCCHHHHhcCCCccCCceee
Confidence 32 33333444444321 11347777776566665431 24565433311
Q ss_pred --CcccccccccHHHHHHHHhCCCCeEEEEecccccccCccccCCCCCcccccEEEEEEecCCcEE
Q 017143 185 --GGTLVEKCCHFFDLMRLFVGSNPMRVMASGAVDVNHKDEMYNGKVPDIIDNAYVIVEFENGSRG 248 (376)
Q Consensus 185 --gG~l~d~g~H~ld~~~~l~G~~~~~V~a~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~G~~~ 248 (376)
+-.|++-|--.+. +.||||-++.++....+. ....+.+++|.||.+.
T Consensus 304 IDSATMmNKGLEvIE-A~~LF~v~~d~IeVvVHP----------------QSIIHSmVef~DGSvi 352 (488)
T 3au8_A 304 IDSATMMNKGLEVIE-THFLFDVDYNDIEVIVHK----------------ECIIHSCVEFIDKSVI 352 (488)
T ss_dssp HHHHSSHHHHHHHHH-HHHHHTCCGGGEEEEECT----------------TCCEEEEEEETTSCEE
T ss_pred eehHhHhhhhHHHhH-HHHHcCCCHHHeEEEECC----------------CCceeEEEEEeCCcEE
Confidence 2234444433333 689999877777776543 2458899999999764
No 172
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.64 E-value=0.0005 Score=61.82 Aligned_cols=76 Identities=18% Similarity=0.176 Sum_probs=53.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHH-------hcCC----------------CCCc
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLAN-------AFDW----------------PLKV 62 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~-------~~~~----------------~~~~ 62 (376)
+.||+|||+|.||......+... +.+|+ ++|+++++++++.+..+ +.|. .+..
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~---G~~V~-~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 90 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT---GHTVV-LVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 90 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE
Confidence 46899999999999888888774 77866 78999886654422110 1121 0234
Q ss_pred cCCHHHHhhCCCCCEEEEeCCCCcc
Q 017143 63 FPGHQELLDSGLCDVVVVSTPNMTH 87 (376)
Q Consensus 63 ~~~~~~~l~~~~~D~V~i~t~~~~h 87 (376)
.+++++.+++ .|+|++++|....
T Consensus 91 ~~~~~~~~~~--aD~Vi~avp~~~~ 113 (302)
T 1f0y_A 91 STDAASVVHS--TDLVVEAIVENLK 113 (302)
T ss_dssp ESCHHHHTTS--CSEEEECCCSCHH
T ss_pred ecCHHHhhcC--CCEEEEcCcCcHH
Confidence 6788877765 8999999998753
No 173
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.61 E-value=5.4e-05 Score=64.39 Aligned_cols=77 Identities=18% Similarity=0.351 Sum_probs=55.2
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC-----CCCCccCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD-----WPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
+||+||| +|.+|...+..+.+. +.+++ ++++++++ ++++.++++ .++. ++++++++++ .|+|++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~---g~~V~-~~~r~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~D~Vi~ 70 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL---GHEIV-VGSRREEK---AEAKAAEYRRIAGDASIT-GMKNEDAAEA--CDIAVL 70 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT---TCEEE-EEESSHHH---HHHHHHHHHHHHSSCCEE-EEEHHHHHHH--CSEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC---CCEEE-EEeCCHHH---HHHHHHHhccccccCCCC-hhhHHHHHhc--CCEEEE
Confidence 4899999 999999988888775 67766 57888874 334443332 1122 4678888876 899999
Q ss_pred eCCCCccHHHHHH
Q 017143 81 STPNMTHYQILMD 93 (376)
Q Consensus 81 ~t~~~~h~~~~~~ 93 (376)
++|+..+.+++.+
T Consensus 71 ~~~~~~~~~~~~~ 83 (212)
T 1jay_A 71 TIPWEHAIDTARD 83 (212)
T ss_dssp CSCHHHHHHHHHH
T ss_pred eCChhhHHHHHHH
Confidence 9998776665544
No 174
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.60 E-value=7.8e-05 Score=57.28 Aligned_cols=103 Identities=10% Similarity=0.034 Sum_probs=73.4
Q ss_pred CceeEEEEeCC----hhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 5 DTVKYGIIGMG----MMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~G----~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
++-+|+|||+. ..|...+..|.+. +++++.| .+..+ +-.|.+ .|.|+.++-+ +|+|+|
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~---g~~V~pV-nP~~~---------~i~G~~--~y~sl~dlp~---vDlavi 64 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSH---GHEFIPV-GRKKG---------EVLGKT--IINERPVIEG---VDTVTL 64 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHH---TCCEEEE-SSSCS---------EETTEE--CBCSCCCCTT---CCEEEE
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHC---CCeEEEE-CCCCC---------cCCCee--ccCChHHCCC---CCEEEE
Confidence 46789999984 4677777778776 6787765 44322 124654 8999888753 899999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
++|+..-.+++.+|.+ .|...++=-|...+ +++.+.|++ +|+.+.
T Consensus 65 ~~p~~~v~~~v~e~~~--~g~k~v~~~~G~~~----~e~~~~a~~-~Girvv 109 (122)
T 3ff4_A 65 YINPQNQLSEYNYILS--LKPKRVIFNPGTEN----EELEEILSE-NGIEPV 109 (122)
T ss_dssp CSCHHHHGGGHHHHHH--HCCSEEEECTTCCC----HHHHHHHHH-TTCEEE
T ss_pred EeCHHHHHHHHHHHHh--cCCCEEEECCCCCh----HHHHHHHHH-cCCeEE
Confidence 9999999999999998 44333444455443 578888844 588876
No 175
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=97.59 E-value=0.00016 Score=66.45 Aligned_cols=104 Identities=19% Similarity=0.206 Sum_probs=67.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-ChhhHHHHHHHHHhcCC-----------------CCCc--cCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HLQSRQQALKLANAFDW-----------------PLKV--FPG 65 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~~~~~~~~~~~~~~~~-----------------~~~~--~~~ 65 (376)
++||||+|+|.+|+..++.+.....++++|++|.|+ +++......+.-+.+|- ++.+ ..+
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 489999999999999988876542268999999997 33321111111111210 0111 124
Q ss_pred HHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 66 HQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 66 ~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.+++.. +.++|+|+-||+...-.+.+.+.|++| -|-|++.-|..
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aG-akkVVIs~ps~ 126 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAG-AKKVLITAPGK 126 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTT-CSEEEESSCCB
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHHHHcC-CcEEEEcCCCC
Confidence 444421 125899999999999999999999954 25577777654
No 176
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.57 E-value=0.00023 Score=66.79 Aligned_cols=75 Identities=25% Similarity=0.281 Sum_probs=56.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|+|||+|.+|...+..+... +..-+.+++++++ +++++++++|..+..++++++++.. .|+|+.+||..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~---G~~~V~v~~r~~~---ra~~la~~~g~~~~~~~~l~~~l~~--aDvVi~at~~~ 238 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR---GVRAVLVANRTYE---RAVELARDLGGEAVRFDELVDHLAR--SDVVVSATAAP 238 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH---CCSEEEEECSSHH---HHHHHHHHHTCEECCGGGHHHHHHT--CSEEEECCSSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHC---CCCEEEEEeCCHH---HHHHHHHHcCCceecHHhHHHHhcC--CCEEEEccCCC
Confidence 46899999999999988888876 6633447899887 5666777777542234677888865 89999999976
Q ss_pred ccH
Q 017143 86 THY 88 (376)
Q Consensus 86 ~h~ 88 (376)
.+.
T Consensus 239 ~~~ 241 (404)
T 1gpj_A 239 HPV 241 (404)
T ss_dssp SCC
T ss_pred Cce
Confidence 553
No 177
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.57 E-value=6.5e-05 Score=69.50 Aligned_cols=146 Identities=17% Similarity=0.179 Sum_probs=86.0
Q ss_pred CCceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEe-CCChhhHHHHHHHHHhcCC------C----CCccCCHHH--H
Q 017143 4 NDTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIA-DPHLQSRQQALKLANAFDW------P----LKVFPGHQE--L 69 (376)
Q Consensus 4 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~-d~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~--~ 69 (376)
|+++|||||| +|..|...+..|.++ |.++|+.++ +++.. .+.+..-+.+ | -..+.+.+. .
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~h--p~~el~~l~aS~~sa----Gk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~ 90 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKH--PEFEIHALGASSRSA----GKKYKDAASWKQTETLPETEQDIVVQECKPEGN 90 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTT----TSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTT
T ss_pred CCccEEEEECCCChHHHHHHHHHHcC--CCceEEEeecccccc----CCCHHHhcccccccccccccccceEEeCchhhh
Confidence 5679999999 699999999999988 899999886 33221 2222221111 0 011222211 2
Q ss_pred hhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEE-ecCCCC-----------CH--HHHHHHHHHHH----hCCCeEE
Q 017143 70 LDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLV-EKPLCT-----------TV--ADCKKVVDAAR----KRPDILV 131 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~-EKP~a~-----------~~--~e~~~l~~~a~----~~~~~~~ 131 (376)
++ ++|+|+.|+|+....+++.++++ +|..|+- -.++-. +. -..-|+.+... .-.+-.+
T Consensus 91 ~~--~~Dvvf~alp~~~s~~~~~~~~~--~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~~~~~i~~~~i 166 (381)
T 3hsk_A 91 FL--ECDVVFSGLDADVAGDIEKSFVE--AGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAVSKGGKKPGFI 166 (381)
T ss_dssp GG--GCSEEEECCCHHHHHHHHHHHHH--TTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHHHTTCCCCCEE
T ss_pred cc--cCCEEEECCChhHHHHHHHHHHh--CCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhcccccccCCcE
Confidence 33 48999999999999999999999 7766553 111111 11 12223332220 0123345
Q ss_pred EEeeccccCHHHHHHHHHHHc-CCCCceE
Q 017143 132 QVGLEYRYMPPVAKLIQIVKS-GSIGQVK 159 (376)
Q Consensus 132 ~v~~~~r~~p~~~~~k~~i~~-g~iG~i~ 159 (376)
..+-++.-.-....++-+++. |.|-++.
T Consensus 167 IaNPgC~tt~~~laL~PL~~~~glI~~v~ 195 (381)
T 3hsk_A 167 ICISNCSTAGLVAPLKPLVEKFGPIDALT 195 (381)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCceEEE
Confidence 566666556667777878875 6565443
No 178
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.56 E-value=8.4e-05 Score=67.67 Aligned_cols=141 Identities=11% Similarity=0.109 Sum_probs=85.0
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc----CC-CCCccC--CHHHHhhCCCCCE
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF----DW-PLKVFP--GHQELLDSGLCDV 77 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~----~~-~~~~~~--~~~~~l~~~~~D~ 77 (376)
|+||+|+| +|.+|...+..|.++ ++++++++..++..+. ..+.+.+-| +. +..+.+ +.+++++ ++|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~--p~~el~~l~s~~~~~s-aGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~--~~Dv 78 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH--PHMNITALTVSAQSND-AGKLISDLHPQLKGIVELPLQPMSDISEFSP--GVDV 78 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC--TTEEEEEEEEETTCTT-TTSBHHHHCGGGTTTCCCBEEEESSGGGTCT--TCSE
T ss_pred ceEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEecCchhh-cCCchHHhCccccCccceeEeccCCHHHHhc--CCCE
Confidence 58999999 599999999999888 8999999987651100 122222111 21 111111 3444443 4999
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEE-ecCCCC-CHHHHH----------HHH------------HHHHhCCCeEEEE
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLV-EKPLCT-TVADCK----------KVV------------DAARKRPDILVQV 133 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~-EKP~a~-~~~e~~----------~l~------------~~a~~~~~~~~~v 133 (376)
|+.|+|+..-.+++.++++ +|.-|+- --++-. +.+... +|. +.. +.. .+.-
T Consensus 79 vf~a~p~~~s~~~~~~~~~--~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~~i-~~~--~iIa 153 (337)
T 3dr3_A 79 VFLATAHEVSHDLAPQFLE--AGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKL-KEA--NLIA 153 (337)
T ss_dssp EEECSCHHHHHHHHHHHHH--TTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCHHH-HTC--SEEE
T ss_pred EEECCChHHHHHHHHHHHH--CCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHHHh-CCC--CEEe
Confidence 9999999988999999999 6765543 333323 322111 111 111 221 2444
Q ss_pred eeccccCHHHHHHHHHHHcCCCC
Q 017143 134 GLEYRYMPPVAKLIQIVKSGSIG 156 (376)
Q Consensus 134 ~~~~r~~p~~~~~k~~i~~g~iG 156 (376)
+.++.-.-....++-+.+.|.+|
T Consensus 154 nPgC~tt~~~l~L~PL~~~g~~~ 176 (337)
T 3dr3_A 154 VPGCYPTAAQLALKPLIDADLLD 176 (337)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCBC
T ss_pred cCChHHHHHHHHHHHHHHcCccC
Confidence 44444455566777788888776
No 179
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.55 E-value=0.00031 Score=64.06 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=55.2
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHHHHHHHHHhc-----CC--C-CCccC--CHHHHhhCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQQALKLANAF-----DW--P-LKVFP--GHQELLDSGL 74 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~~~-----~~--~-~~~~~--~~~~~l~~~~ 74 (376)
+||+|||+|.+|..+...|.+. +.+|+ ++++ +++ +.+.+.++. |+ . +..++ +.++++.+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~---g~~V~-~~~r~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-- 71 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN---GNEVR-IWGTEFDTE---ILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN-- 71 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH---CCEEE-EECCGGGHH---HHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT--
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCeEE-EEEccCCHH---HHHHHHHhCcCcccCccccceEEecHHhHHHHHhc--
Confidence 4899999999999988888775 56755 6788 776 344444332 11 0 12345 67777765
Q ss_pred CCEEEEeCCCCccHHHHHHH
Q 017143 75 CDVVVVSTPNMTHYQILMDI 94 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~a 94 (376)
.|+|++++|+..+.+++...
T Consensus 72 ~D~vi~~v~~~~~~~v~~~i 91 (335)
T 1txg_A 72 AEVVLLGVSTDGVLPVMSRI 91 (335)
T ss_dssp CSEEEECSCGGGHHHHHHHH
T ss_pred CCEEEEcCChHHHHHHHHHH
Confidence 89999999998776665544
No 180
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.53 E-value=0.00014 Score=65.68 Aligned_cols=81 Identities=20% Similarity=0.204 Sum_probs=52.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCC----------ccCCHHHHhhC-CC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLK----------VFPGHQELLDS-GL 74 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~-~~ 74 (376)
++||+|||+|.+|......|.+. +.+|+ ++++++++ .+++.++ |+.+. .+.+.+++.+. .+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~---g~~V~-~~~r~~~~---~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG---GNDVT-LIDQWPAH---IEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHH---HHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC---CCcEE-EEECCHHH---HHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCC
Confidence 47999999999999988888775 66765 67998874 4444433 32100 01133344331 24
Q ss_pred CCEEEEeCCCCccHHHHHHH
Q 017143 75 CDVVVVSTPNMTHYQILMDI 94 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~a 94 (376)
.|+|++++|+....+.+...
T Consensus 75 ~d~vi~~v~~~~~~~v~~~l 94 (316)
T 2ew2_A 75 VDLIIALTKAQQLDAMFKAI 94 (316)
T ss_dssp CSEEEECSCHHHHHHHHHHH
T ss_pred CCEEEEEeccccHHHHHHHH
Confidence 89999999987666655544
No 181
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.52 E-value=0.00032 Score=64.59 Aligned_cols=85 Identities=13% Similarity=0.103 Sum_probs=55.4
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCC-------cEEEEEeCCChh-----hHHHHHHHHH--hc--C--CC--CCcc
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQG-------VSVVCIADPHLQ-----SRQQALKLAN--AF--D--WP--LKVF 63 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~-------~~~~~v~d~~~~-----~~~~~~~~~~--~~--~--~~--~~~~ 63 (376)
|.++||+|||+|.||......+.+. + .+| .+++++++ ..+...+... .+ + ++ +..+
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~---g~~~~~~~~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN---AAQLAQFDPRV-TMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV 81 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH---HHHCTTEEEEE-EEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc---CCcccCCCCeE-EEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE
Confidence 3457999999999999888888765 3 554 57888876 4333322100 01 1 11 2345
Q ss_pred CCHHHHhhCCCCCEEEEeCCCCccHHHHHHH
Q 017143 64 PGHQELLDSGLCDVVVVSTPNMTHYQILMDI 94 (376)
Q Consensus 64 ~~~~~~l~~~~~D~V~i~t~~~~h~~~~~~a 94 (376)
++.++++.+ .|+|++++|+....+++.+.
T Consensus 82 ~~~~~~~~~--aD~Vilav~~~~~~~v~~~i 110 (354)
T 1x0v_A 82 PDVVQAAED--ADILIFVVPHQFIGKICDQL 110 (354)
T ss_dssp SSHHHHHTT--CSEEEECCCGGGHHHHHHHH
T ss_pred cCHHHHHcC--CCEEEEeCCHHHHHHHHHHH
Confidence 788888865 89999999987655555443
No 182
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.50 E-value=0.00084 Score=63.20 Aligned_cols=123 Identities=17% Similarity=0.168 Sum_probs=72.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHH------------HH----HhcCCCCCccCCHHH
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALK------------LA----NAFDWPLKVFPGHQE 68 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~------------~~----~~~~~~~~~~~~~~~ 68 (376)
.+-+|+|||+|.+|......++.. +++|++ +|.++++.+...+ +. +.-. .+..++.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~---G~~V~g-~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~--l~~tt~~~~ 93 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALL---GHRVVG-YDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGR--LSFAESAEE 93 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH---TCEEEE-ECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTC--EEECSSHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC---CCcEEE-EECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCC--eeEEcCHHH
Confidence 357999999999999888888876 889886 6999985543321 11 1111 234567788
Q ss_pred HhhCCCCCEEEEeCCCCc---------cHHHHH----HHHcCC-CCCeEEEec--CCCCCHHHHHHHHHHHHhCCCeEEE
Q 017143 69 LLDSGLCDVVVVSTPNMT---------HYQILM----DIINHP-KPHHVLVEK--PLCTTVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 69 ~l~~~~~D~V~i~t~~~~---------h~~~~~----~al~~~-~g~~Vl~EK--P~a~~~~e~~~l~~~a~~~~~~~~~ 132 (376)
.+.. .|+++||.|+.. +.+-+. +.|+.+ .|.-|..|- |..++.+-...+++.. .++..+.
T Consensus 94 ai~~--ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~--~~~~~f~ 169 (444)
T 3vtf_A 94 AVAA--TDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEE--AGGVKFS 169 (444)
T ss_dssp HHHT--SSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTT--TTTCCCE
T ss_pred HHhc--CCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHh--CCCCCce
Confidence 7776 688888876432 122222 234311 233344443 5555554444444332 3466666
Q ss_pred Eeecc
Q 017143 133 VGLEY 137 (376)
Q Consensus 133 v~~~~ 137 (376)
++++.
T Consensus 170 v~~~P 174 (444)
T 3vtf_A 170 VASNP 174 (444)
T ss_dssp EEECC
T ss_pred eecCc
Confidence 66653
No 183
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.50 E-value=0.00038 Score=66.45 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=50.3
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChh----hHHHHHH--------------HHH---hcCCCCCc
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQ----SRQQALK--------------LAN---AFDWPLKV 62 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~----~~~~~~~--------------~~~---~~~~~~~~ 62 (376)
+.+||+|||+|.+|......+++. ++. +|+ ++|++++ +.+...+ +.+ ..+- +..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~--~G~~~V~-~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~-l~~ 92 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADA--PCFEKVL-GFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGK-FEC 92 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHS--TTCCEEE-EECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTC-EEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHh--CCCCeEE-EEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCC-eEE
Confidence 457999999999999988888775 478 877 5899987 5443321 000 0110 123
Q ss_pred cCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 63 FPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 63 ~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
.++ .+.+++ .|+|++|.|+..
T Consensus 93 ttd-~ea~~~--aDvViiaVptp~ 113 (478)
T 3g79_A 93 TPD-FSRISE--LDAVTLAIQTPF 113 (478)
T ss_dssp ESC-GGGGGG--CSEEEECCCCCC
T ss_pred eCc-HHHHhc--CCEEEEecCCch
Confidence 455 456655 899999999764
No 184
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=97.50 E-value=8.4e-05 Score=70.86 Aligned_cols=109 Identities=17% Similarity=0.169 Sum_probs=79.8
Q ss_pred CceeEEEEeCC----hhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 5 DTVKYGIIGMG----MMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~G----~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
++-+|+|||++ .+|..|+..+.+. ....|+. +++... +-+|++ +|.|++++.+. +|+++|
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~--g~~~v~p-VnP~~~---------~i~G~~--~y~sl~~lp~~--~Dlavi 70 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEY--KKGKVYP-VNIKEE---------EVQGVK--AYKSVKDIPDE--IDLAII 70 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTC--CSSEEEE-ECSSCS---------EETTEE--CBSSTTSCSSC--CSEEEE
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHc--CCCEEEE-ECCCCC---------eECCEe--ccCCHHHcCCC--CCEEEE
Confidence 46789999997 5788998888775 3455544 455422 124765 99999998763 999999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCC--H----HHHHHHHHHHHhCCCeEEE
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTT--V----ADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~--~----~e~~~l~~~a~~~~~~~~~ 132 (376)
++|+..+.+.+.+|++ +|...++-.+-... - +..+++.+.+++ +|+.+.
T Consensus 71 ~vp~~~~~~~v~e~~~--~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~-~g~~vi 125 (457)
T 2csu_A 71 VVPKRFVKDTLIQCGE--KGVKGVVIITAGFGETGEEGKREEKELVEIAHK-YGMRII 125 (457)
T ss_dssp CSCHHHHHHHHHHHHH--HTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHH-HTCEEE
T ss_pred ecCHHHHHHHHHHHHH--cCCCEEEEecCCCCccccccHHHHHHHHHHHHH-cCCEEE
Confidence 9999999999999999 77776666664332 1 226788888854 476655
No 185
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.48 E-value=8.9e-05 Score=66.59 Aligned_cols=119 Identities=16% Similarity=0.179 Sum_probs=74.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC-Cc--cCCHHHHhhCCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL-KV--FPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~l~~~~~D~V~i~t 82 (376)
..+++|||+|.+|+..+..|... ++.-+.|++|+++ ++++++++++... .. ++++.+.+.. .|+|+.+|
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~---G~~~V~v~nR~~~---ka~~la~~~~~~~~~~~~~~~~~~~~~~--aDivIn~t 212 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST---AAERIDMANRTVE---KAERLVREGDERRSAYFSLAEAETRLAE--YDIIINTT 212 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCSEEEEECSSHH---HHHHHHHHSCSSSCCEECHHHHHHTGGG--CSEEEECS
T ss_pred CCEEEEECcHHHHHHHHHHHHHC---CCCEEEEEeCCHH---HHHHHHHHhhhccCceeeHHHHHhhhcc--CCEEEECC
Confidence 45899999999999998888875 6633458999987 6778887765310 12 1234444544 89999999
Q ss_pred CCCccHH-----HHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeecccc
Q 017143 83 PNMTHYQ-----ILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRY 139 (376)
Q Consensus 83 ~~~~h~~-----~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~ 139 (376)
|...+.. +....++ .|. ++++= ..++.+. +|.+.++++ |..+.-|.....
T Consensus 213 ~~~~~~~~~~~~i~~~~l~--~~~-~v~D~--~y~P~~T-~ll~~A~~~-G~~~v~Gl~MLv 267 (297)
T 2egg_A 213 SVGMHPRVEVQPLSLERLR--PGV-IVSDI--IYNPLET-KWLKEAKAR-GARVQNGVGMLV 267 (297)
T ss_dssp CTTCSSCCSCCSSCCTTCC--TTC-EEEEC--CCSSSSC-HHHHHHHHT-TCEEECSHHHHH
T ss_pred CCCCCCCCCCCCCCHHHcC--CCC-EEEEc--CCCCCCC-HHHHHHHHC-cCEEECCHHHHH
Confidence 9876521 1223455 444 34432 2222233 266777454 777766654433
No 186
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=97.47 E-value=0.00019 Score=65.10 Aligned_cols=102 Identities=21% Similarity=0.249 Sum_probs=66.7
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-ChhhHHHHHHHHHhcCC-----------------CCCccC--CH
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HLQSRQQALKLANAFDW-----------------PLKVFP--GH 66 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~ 66 (376)
+||||+|.|.+|+..++.+..+..++++|++|.|. +++......+.-+.+|- ++.++. +.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 58999999999999998887652368999999996 33321111111122221 111221 33
Q ss_pred HHHh-hCCCCCEEEEeCCCCccHHHHHHHHcCCCC-CeEEEecCCC
Q 017143 67 QELL-DSGLCDVVVVSTPNMTHYQILMDIINHPKP-HHVLVEKPLC 110 (376)
Q Consensus 67 ~~~l-~~~~~D~V~i~t~~~~h~~~~~~al~~~~g-~~Vl~EKP~a 110 (376)
+++- .+.++|+|+-|||...-.+.+.+.++ +| |-|++.-|..
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~--aGakkvVId~~a~ 124 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFRNREKAELHLQ--AGAKKVIITAPAK 124 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHHH--TTCSEEEESSCCB
T ss_pred HHCcccccCCCEEEECCccchhHHHHHHHHH--cCCcEEEEeCCCC
Confidence 3331 21258999999999999999999999 55 3477777654
No 187
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.45 E-value=0.00014 Score=68.47 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=57.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhh---cCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--CccCCHHHHhhCCCCCEEEEe
Q 017143 7 VKYGIIGMGMMGREHFINLHHL---RSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~---~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~D~V~i~ 81 (376)
.||||||+|.+|..++..|++. ...+++++...++++. ..+.+.+.|+.. ....+.+++++. .|+|+++
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sk----s~e~A~e~G~~v~d~ta~s~aEAa~~--ADVVILa 128 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSK----SFDEARAAGFTEESGTLGDIWETVSG--SDLVLLL 128 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCS----CHHHHHHTTCCTTTTCEEEHHHHHHH--CSEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchh----hHHHHHHCCCEEecCCCCCHHHHHhc--CCEEEEC
Confidence 5899999999999999888774 1126777644444433 333455667651 123688999987 8999999
Q ss_pred CCCCccHHHHHH
Q 017143 82 TPNMTHYQILMD 93 (376)
Q Consensus 82 t~~~~h~~~~~~ 93 (376)
+|+..+.++..+
T Consensus 129 VP~~~~~eVl~e 140 (525)
T 3fr7_A 129 ISDAAQADNYEK 140 (525)
T ss_dssp SCHHHHHHHHHH
T ss_pred CChHHHHHHHHH
Confidence 999888766544
No 188
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.44 E-value=0.00082 Score=63.09 Aligned_cols=99 Identities=18% Similarity=0.139 Sum_probs=64.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeC---CChhhHHHHHHHHHhcC---------C-------CCC-ccCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIAD---PHLQSRQQALKLANAFD---------W-------PLK-VFPG 65 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d---~~~~~~~~~~~~~~~~~---------~-------~~~-~~~~ 65 (376)
++||+|||+|.+|......|+.. .+.+|+ +++ ++++ ..+++.++.+ - .+. .+++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~--~G~~V~-~~~~~~r~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASR--DGVEVR-VLTLFADEAE---RWTKALGADELTVIVNEKDGTQTEVKSRPKVITKD 75 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS--TTEEEE-EECCSTTHHH---HHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESC
T ss_pred CceEEEECCCHHHHHHHHHHHhC--CCCEEE-EEeCCCCcHH---HHHHHHhhccceeeeecCCCccceeeccceEEeCC
Confidence 37999999999999988888663 367766 677 6555 3444222222 0 112 5578
Q ss_pred HHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCC
Q 017143 66 HQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTT 112 (376)
Q Consensus 66 ~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~ 112 (376)
.++++.. .|+|++++|+..+.+.+.+....-....+++-.+.+..
T Consensus 76 ~~~a~~~--aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 76 PEIAISG--ADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp HHHHHTT--CSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred HHHHhCC--CCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 8888765 89999999999887776654331111246666665554
No 189
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.43 E-value=0.0003 Score=55.43 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=55.0
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhh--CCCC
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLD--SGLC 75 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~--~~~~ 75 (376)
|+..++.+|.|+|+|.+|...+..|.+. +.+++ ++|+++++ .+.+.+ .++. ..+ ++.+.+-+ -.+.
T Consensus 1 m~~~~~~~v~I~G~G~iG~~la~~L~~~---g~~V~-~id~~~~~---~~~~~~-~~~~-~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 1 MTENGRYEYIVIGSEAAGVGLVRELTAA---GKKVL-AVDKSKEK---IELLED-EGFD-AVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHT---TCCEE-EEESCHHH---HHHHHH-TTCE-EEECCTTCHHHHHHSCCTTC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC---CCeEE-EEECCHHH---HHHHHH-CCCc-EEECCCCCHHHHHhCCcccC
Confidence 5544567899999999999988888875 77876 56888874 444433 3443 111 23332222 2358
Q ss_pred CEEEEeCCCCccHHHHHHHH-cCCCCCeEEE
Q 017143 76 DVVVVSTPNMTHYQILMDII-NHPKPHHVLV 105 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~al-~~~~g~~Vl~ 105 (376)
|+|++++|+...-..+...+ +.+ ...|++
T Consensus 72 d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 72 SAVLITGSDDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CEEEEecCCHHHHHHHHHHHHHhC-CceEEE
Confidence 99999999654433333333 322 344554
No 190
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=97.40 E-value=0.00062 Score=61.74 Aligned_cols=102 Identities=23% Similarity=0.209 Sum_probs=66.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHH---hcCCC------------------CCcc-
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLAN---AFDWP------------------LKVF- 63 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~---~~~~~------------------~~~~- 63 (376)
++||||+|.|.+|+..++.+.....|.++|++|.|.... +....+.+ .+|-. +.++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~--~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~ 78 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGV--KQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVS 78 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCH--HHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEEC
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCH--HHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEe
Confidence 489999999999999998887643378999999986321 12222221 11110 0111
Q ss_pred -CCHHHH-hhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 64 -PGHQEL-LDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 64 -~~~~~~-l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.+.+++ ..+.++|+|+-|||...-.+.+.+.+++| -|-|.+--|..
T Consensus 79 ~~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~G-ak~V~iSap~r 126 (337)
T 1rm4_O 79 DRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAG-AKKVLITAPGK 126 (337)
T ss_dssp CSCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTT-CSEEEESSCCB
T ss_pred cCChhhCcccccCCCEEEECCCchhhHHHHHHHHHcC-CEEEEECCccc
Confidence 223332 22125899999999999999999999954 35677766654
No 191
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.40 E-value=0.00046 Score=61.84 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=72.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|+|||+|.+|+..+..++.. +.+|+ ++|+++++. +.+ .++|.....+.++++++.. .|+|++++|..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~---G~~V~-~~dr~~~~~---~~~-~~~g~~~~~~~~l~~~l~~--aDvVi~~~p~~ 224 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL---GAKVK-VGARESDLL---ARI-AEMGMEPFHISKAAQELRD--VDVCINTIPAL 224 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESSHHHH---HHH-HHTTSEEEEGGGHHHHTTT--CSEEEECCSSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CCEEE-EEECCHHHH---HHH-HHCCCeecChhhHHHHhcC--CCEEEECCChH
Confidence 46899999999999988888776 67765 688888642 222 2456431113678888875 89999999986
Q ss_pred ccHHHHHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEE--EeeccccCH
Q 017143 86 THYQILMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQ--VGLEYRYMP 141 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~--v~~~~r~~p 141 (376)
.--+-..+.++ .| .+++. .|...+. +.+++. |+.+. -+....+.|
T Consensus 225 ~i~~~~l~~mk--~~-~~lin~ar~~~~~~~-------~~a~~~-Gv~~~~~~~l~~~v~p 274 (293)
T 3d4o_A 225 VVTANVLAEMP--SH-TFVIDLASKPGGTDF-------RYAEKR-GIKALLVPGLPGIVAP 274 (293)
T ss_dssp CBCHHHHHHSC--TT-CEEEECSSTTCSBCH-------HHHHHH-TCEEEECCCHHHHHCH
T ss_pred HhCHHHHHhcC--CC-CEEEEecCCCCCCCH-------HHHHHC-CCEEEECCCCCcccCH
Confidence 54344556677 54 34443 3333332 233233 55553 455555544
No 192
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.39 E-value=0.00035 Score=62.84 Aligned_cols=88 Identities=13% Similarity=0.226 Sum_probs=60.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|+|||+|.+|+..+..+... +.+|+ ++|+++++ .+.+. ++|.....+.+++++++. .|+|++++|..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~---G~~V~-~~d~~~~~---~~~~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~p~~ 226 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL---GANVK-VGARSSAH---LARIT-EMGLVPFHTDELKEHVKD--IDICINTIPSM 226 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESSHHH---HHHHH-HTTCEEEEGGGHHHHSTT--CSEEEECCSSC
T ss_pred CCEEEEEcccHHHHHHHHHHHHC---CCEEE-EEECCHHH---HHHHH-HCCCeEEchhhHHHHhhC--CCEEEECCChh
Confidence 46899999999999998888876 67765 68898863 33332 356431124678888875 89999999985
Q ss_pred ccHHHHHHHHcCCCCCeEEEe
Q 017143 86 THYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~E 106 (376)
.--+-....++ .| .+++.
T Consensus 227 ~i~~~~~~~mk--~g-~~lin 244 (300)
T 2rir_A 227 ILNQTVLSSMT--PK-TLILD 244 (300)
T ss_dssp CBCHHHHTTSC--TT-CEEEE
T ss_pred hhCHHHHHhCC--CC-CEEEE
Confidence 43333445566 44 45554
No 193
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.34 E-value=0.001 Score=58.39 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=73.6
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
-++.|||+|.+|+..+..|... +.+| .|++|+++ ++++++ ++++.... ++++ . +.|+|+.+||...
T Consensus 119 k~vlvlGaGGaaraia~~L~~~---G~~v-~V~nRt~~---ka~~la-~~~~~~~~---~~~l-~--~~DiVInaTp~Gm 184 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ---GLQV-SVLNRSSR---GLDFFQ-RLGCDCFM---EPPK-S--AFDLIINATSASL 184 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEE-EEECSSCT---THHHHH-HHTCEEES---SCCS-S--CCSEEEECCTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEE-EEEeCCHH---HHHHHH-HCCCeEec---HHHh-c--cCCEEEEcccCCC
Confidence 4899999999999999888886 4554 58899998 577777 77754222 3333 2 5899999999765
Q ss_pred cH------HHHHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHH
Q 017143 87 HY------QILMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKL 146 (376)
Q Consensus 87 h~------~~~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~ 146 (376)
+. +.+...++ .+ .++++ +| .|. +.+.|+++ |..+.-|....-..+....
T Consensus 185 ~~~~~l~~~~l~~~l~--~~-~~v~D~vY~P--~T~-----ll~~A~~~-G~~~~~Gl~MLv~Qa~~~f 242 (269)
T 3phh_A 185 HNELPLNKEVLKGYFK--EG-KLAYDLAYGF--LTP-----FLSLAKEL-KTPFQDGKDMLIYQAALSF 242 (269)
T ss_dssp CCSCSSCHHHHHHHHH--HC-SEEEESCCSS--CCH-----HHHHHHHT-TCCEECSHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHhhCC--CC-CEEEEeCCCC--chH-----HHHHHHHC-cCEEECCHHHHHHHHHHHH
Confidence 42 22222555 33 45555 44 222 66666454 7777777655544433333
No 194
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.34 E-value=0.00044 Score=62.50 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=51.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhc--CCC-cEEEEEeCCChhhHHHHHHHHHhcCCCC------------CccCCHHHHh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLR--SQG-VSVVCIADPHLQSRQQALKLANAFDWPL------------KVFPGHQELL 70 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~--~~~-~~~~~v~d~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l 70 (376)
++||+|||+|.+|......|.+.. ..+ .+|+ ++++ ++ +.+++.++.|+.+ ..+++.+ .+
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r-~~---~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 81 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVS-WIAR-GA---HLEAIRAAGGLRVVTPSRDFLARPTCVTDNPA-EV 81 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEE-EECC-HH---HHHHHHHHTSEEEECSSCEEEECCSEEESCHH-HH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEE-EEEc-HH---HHHHHHhcCCeEEEeCCCCeEEecceEecCcc-cc
Confidence 479999999999998877776530 005 6766 6777 55 4555544234321 1123443 34
Q ss_pred hCCCCCEEEEeCCCCccHHHHHHH
Q 017143 71 DSGLCDVVVVSTPNMTHYQILMDI 94 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~~h~~~~~~a 94 (376)
. +.|+|++++|+....+.+...
T Consensus 82 ~--~~D~vil~vk~~~~~~v~~~i 103 (317)
T 2qyt_A 82 G--TVDYILFCTKDYDMERGVAEI 103 (317)
T ss_dssp C--CEEEEEECCSSSCHHHHHHHH
T ss_pred C--CCCEEEEecCcccHHHHHHHH
Confidence 3 489999999998876665443
No 195
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=97.33 E-value=0.00077 Score=61.45 Aligned_cols=67 Identities=25% Similarity=0.411 Sum_probs=51.7
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
...+|||||+|.||+.....++.. +.+++ ++|++++. +.+.++|+. +.++++++++ .|+|++++|.
T Consensus 145 ~g~~vgIIG~G~iG~~vA~~l~~~---G~~V~-~~d~~~~~-----~~~~~~g~~---~~~l~e~l~~--aDiVil~vp~ 210 (333)
T 2d0i_A 145 YGKKVGILGMGAIGKAIARRLIPF---GVKLY-YWSRHRKV-----NVEKELKAR---YMDIDELLEK--SDIVILALPL 210 (333)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG---TCEEE-EECSSCCH-----HHHHHHTEE---ECCHHHHHHH--CSEEEECCCC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC---CCEEE-EECCCcch-----hhhhhcCce---ecCHHHHHhh--CCEEEEcCCC
Confidence 346899999999999998888776 67865 68888763 223345643 3489999986 8999999998
Q ss_pred C
Q 017143 85 M 85 (376)
Q Consensus 85 ~ 85 (376)
.
T Consensus 211 ~ 211 (333)
T 2d0i_A 211 T 211 (333)
T ss_dssp C
T ss_pred C
Confidence 6
No 196
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.31 E-value=0.00056 Score=53.91 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=64.6
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCC--HHHHhhC---CCCCEE
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPG--HQELLDS---GLCDVV 78 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~---~~~D~V 78 (376)
..+-+|.|+|+|.+|...+..|... +.+++ ++|+++++ .+++. +.|+. ..+.| -++.|.. .+.|+|
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~---g~~v~-vid~~~~~---~~~~~-~~g~~-~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLAS---DIPLV-VIETSRTR---VDELR-ERGVR-AVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT---TCCEE-EEESCHHH---HHHHH-HTTCE-EEESCTTSHHHHHHTTGGGCSEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC---CCCEE-EEECCHHH---HHHHH-HcCCC-EEECCCCCHHHHHhcCcccCCEE
Confidence 3457899999999999998888875 77876 56888884 44433 35654 22222 2233332 358999
Q ss_pred EEeCCCCccHHHHHH-HHcCCCCCeEEEecCCCCCHHHHHHHH
Q 017143 79 VVSTPNMTHYQILMD-IINHPKPHHVLVEKPLCTTVADCKKVV 120 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~-al~~~~g~~Vl~EKP~a~~~~e~~~l~ 120 (376)
++++|++..-..+.. +-+...+..|++ .+.+.+....|.
T Consensus 76 i~~~~~~~~n~~~~~~a~~~~~~~~iia---r~~~~~~~~~l~ 115 (140)
T 3fwz_A 76 ILTIPNGYEAGEIVASARAKNPDIEIIA---RAHYDDEVAYIT 115 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHHCSSSEEEE---EESSHHHHHHHH
T ss_pred EEECCChHHHHHHHHHHHHHCCCCeEEE---EECCHHHHHHHH
Confidence 999998754443332 322113556765 345666655544
No 197
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=97.31 E-value=0.0012 Score=59.68 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=80.1
Q ss_pred CceeEEEEeC-ChhhHHHHHH--hhhhcCCCcEEEEEeCCChhhHHHHHHH---HHhcCCCCCccCCHHHHhhC-CCCCE
Q 017143 5 DTVKYGIIGM-GMMGREHFIN--LHHLRSQGVSVVCIADPHLQSRQQALKL---ANAFDWPLKVFPGHQELLDS-GLCDV 77 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~--~~~~~~~~~~~~~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~-~~~D~ 77 (376)
+..||.|-|+ |.+++..+.. +.+. ++.++++.+++.... ..+++ ..+.|+| +|+|++++.+. +++|+
T Consensus 9 ~~tkviV~G~~Gk~~~~ml~~~~~~~r--~~~~vVagV~P~~~g--~~~~v~~G~~~~Gvp--vy~sv~ea~~~~p~~Dl 82 (334)
T 3mwd_B 9 RHTKAIVWGMQTRAVQGMLDFDYVCSR--DEPSVAAMVYPFTGD--HKQKFYWGHKEILIP--VFKNMADAMRKHPEVDV 82 (334)
T ss_dssp TTCCEEEESCCHHHHHHHHHHHHHTTC--SSCSEEEEECTTSCS--EEEEEEETTEEEEEE--EESSHHHHHHHCTTCCE
T ss_pred CCCeEEEECCchHHHHHHHHhcccccC--CCceEEEEEcCCCCC--ccceEeccCccCCce--eeCCHHHHhhcCCCCcE
Confidence 4689999997 5444443332 2222 679999999986530 00111 0123555 99999999875 36899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCC-eEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeecc
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPH-HVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEY 137 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~-~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~ 137 (376)
++|++|+..-.+.+++++.+ +|. .|.|=-. ....++.++|.+++++. |+ -.+|.|.
T Consensus 83 aVi~vp~~~a~~ai~ea~~~-~Gv~~vViiT~-G~~e~~~~~l~~~a~~~-g~-rliGPNc 139 (334)
T 3mwd_B 83 LINFASLRSAYDSTMETMNY-AQIRTIAIIAE-GIPEALTRKLIKKADQK-GV-TIIGPAT 139 (334)
T ss_dssp EEECCCTTTHHHHHHHHTTS-TTCCEEEECCS-CCCHHHHHHHHHHHHHH-TC-EEECSSC
T ss_pred EEEecCHHHHHHHHHHHHHH-CCCCEEEEECC-CCCHHHHHHHHHHHHHc-CC-EEEccCC
Confidence 99999999888888888863 344 5666222 34557888999999554 65 3455544
No 198
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.31 E-value=0.00042 Score=63.46 Aligned_cols=68 Identities=21% Similarity=0.369 Sum_probs=52.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+..+..++.. +.+|+ ++|+++.+.+. +.+.|+. .++++++++++ .|+|++++|..
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~---G~~V~-~~dr~~~~~~~----~~~~g~~--~~~~l~ell~~--aDvV~l~~Plt 231 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPF---GCNLL-YHDRLQMAPEL----EKETGAK--FVEDLNEMLPK--CDVIVINMPLT 231 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---CCEEE-EECSSCCCHHH----HHHHCCE--ECSCHHHHGGG--CSEEEECSCCC
T ss_pred CCEEeEEEeCHHHHHHHHHHHHC---CCEEE-EeCCCccCHHH----HHhCCCe--EcCCHHHHHhc--CCEEEECCCCC
Confidence 36899999999999999888876 78866 57887653222 2344653 66799999987 89999999954
No 199
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=97.28 E-value=0.00037 Score=63.30 Aligned_cols=118 Identities=10% Similarity=0.012 Sum_probs=81.7
Q ss_pred CCceeEEEEeCChhhHHH---HHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 4 NDTVKYGIIGMGMMGREH---FINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~---~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
+..-|+.|.+.|.+|..+ ...+.+. +..+++++.|.+..-++..+-+....|+| .+.|++++++. ++|.++|
T Consensus 5 ~~~~~~vi~~~g~~~~~~aKta~gl~r~--~~~~iVgvid~~~~G~d~ge~~g~~~gip--i~~~l~~al~~-~~d~lvi 79 (349)
T 2obn_A 5 PLNQRVAILLHEGTTGTIGKTGLALLRY--SEAPIVAVIDRNCAGQSLREITGIYRYVP--IVKSVEAALEY-KPQVLVI 79 (349)
T ss_dssp --CCCEEEECTTTSSSSSCHHHHHHHHH--CCSCEEEEECGGGTTSCHHHHHCCCSCCC--EESSHHHHGGG-CCSEEEE
T ss_pred CCCCcEEEEeCCCCCcHHHHHhHHhhhc--CCCcEEEEEeCCCCCCcHHHhcCCcCCCC--ccCCHHHHHhC-CCCEEEE
Confidence 345689999999988633 3445666 56899999998754322221121223454 88999999975 5999999
Q ss_pred eCCC------CccHHHHHHHHcCCCCCeEEE--ecCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 017143 81 STPN------MTHYQILMDIINHPKPHHVLV--EKPLCTTVADCKKVVDAARKRPDILVQVG 134 (376)
Q Consensus 81 ~t~~------~~h~~~~~~al~~~~g~~Vl~--EKP~a~~~~e~~~l~~~a~~~~~~~~~v~ 134 (376)
.+.| ..=.+.+.+|++ +|++|.. +-|++.+++ |.++| ++ |+.++..
T Consensus 80 g~a~~gG~l~~~~~~~i~~Al~--~G~~Vvsglh~~l~~~pe----l~~~A-~~-g~~i~dv 133 (349)
T 2obn_A 80 GIAPKGGGIPDDYWIELKTALQ--AGMSLVNGLHTPLANIPD----LNALL-QP-GQLIWDV 133 (349)
T ss_dssp CCCCCCC-SCGGGHHHHHHHHH--TTCEEEECSSSCCTTCHH----HHHHC-CT-TCCEEET
T ss_pred EecCCCCCCCHHHHHHHHHHHH--cCCcEEeCccchhhCCHH----HHHHH-Hc-CCEEEEe
Confidence 9843 234688999999 8899964 447776666 77778 66 7776654
No 200
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.28 E-value=0.00011 Score=64.28 Aligned_cols=69 Identities=14% Similarity=0.188 Sum_probs=54.3
Q ss_pred eEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 8 KYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 8 ~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
+++|||+|.+|+..+..|... +++-+.|++|+++ ++++++++++. ..+++.++.+.+ .|+|+.+||...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~---G~~~I~v~nR~~~---ka~~la~~~~~--~~~~~~~~~~~~--aDiVInatp~gm 178 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM---GVKDIWVVNRTIE---RAKALDFPVKI--FSLDQLDEVVKK--AKSLFNTTSVGM 178 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT---TCCCEEEEESCHH---HHHTCCSSCEE--EEGGGHHHHHHT--CSEEEECSSTTT
T ss_pred eEEEECcHHHHHHHHHHHHHc---CCCEEEEEeCCHH---HHHHHHHHccc--CCHHHHHhhhcC--CCEEEECCCCCC
Confidence 899999999999988888876 5644568899987 67777776653 246777777776 899999998654
No 201
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.27 E-value=0.00017 Score=65.91 Aligned_cols=139 Identities=10% Similarity=0.063 Sum_probs=81.9
Q ss_pred CceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHH-HhhCCCCCEEEEeC
Q 017143 5 DTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQE-LLDSGLCDVVVVST 82 (376)
Q Consensus 5 ~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~D~V~i~t 82 (376)
+++||+|+| +|.+|+..++.+....-+.++++++.+++... + .+. -.+.++ .+.+.+. .+ .++|+|+.|+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G--~--~~~-~~~~~i-~~~~~~~~~~--~~vDvVf~a~ 73 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEG--K--TYR-FNGKTV-RVQNVEEFDW--SQVHIALFSA 73 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTT--C--EEE-ETTEEE-EEEEGGGCCG--GGCSEEEECS
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCC--C--cee-ecCcee-EEecCChHHh--cCCCEEEECC
Confidence 369999999 89999999888766422689999999754321 0 000 001111 1222221 22 2589999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEec---------CCC---CCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHH
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEK---------PLC---TTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIV 150 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EK---------P~a---~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i 150 (376)
|+..+.+.+..+++ +|..|+.=- |.. .+.++.+ . . + +..+.-+.++.-......++-+.
T Consensus 74 g~~~s~~~a~~~~~--~G~~vId~s~~~R~~~~~~~~vpevN~~~i~---~-~-~--~~~iIanp~C~tt~~~~~l~pL~ 144 (336)
T 2r00_A 74 GGELSAKWAPIAAE--AGVVVIDNTSHFRYDYDIPLVVPEVNPEAIA---E-F-R--NRNIIANPNCSTIQMLVALKPIY 144 (336)
T ss_dssp CHHHHHHHHHHHHH--TTCEEEECSSTTTTCTTSCBCCTTTCGGGGG---G-G-G--GTTEEECCCHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHH--cCCEEEEcCCccccCCCCCeEeccCCHHHhc---c-c-c--CCcEEECCChHHHHHHHHHHHHH
Confidence 99999999999999 777655421 222 2222221 1 1 1 12244444444455566677777
Q ss_pred HcCCCCceEE
Q 017143 151 KSGSIGQVKM 160 (376)
Q Consensus 151 ~~g~iG~i~~ 160 (376)
+.+.|-++..
T Consensus 145 ~~~~i~~~~v 154 (336)
T 2r00_A 145 DAVGIERINV 154 (336)
T ss_dssp HHHCEEEEEE
T ss_pred HhCCccEEEE
Confidence 7666654443
No 202
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.25 E-value=0.00049 Score=63.09 Aligned_cols=143 Identities=12% Similarity=0.031 Sum_probs=86.1
Q ss_pred CCceeEEEEe-CChhhHHHHHHhhhhcCC-----CcEEEEEeCCChhhHHHHHHHHHhc-C-CCCCcc-CCHHHHhhCCC
Q 017143 4 NDTVKYGIIG-MGMMGREHFINLHHLRSQ-----GVSVVCIADPHLQSRQQALKLANAF-D-WPLKVF-PGHQELLDSGL 74 (376)
Q Consensus 4 ~~~~~v~iiG-~G~~g~~~~~~~~~~~~~-----~~~~~~v~d~~~~~~~~~~~~~~~~-~-~~~~~~-~~~~~~l~~~~ 74 (376)
|+++||+|+| +|.+|+..++.|.+. + .++++++.+++.... ........+ + .+.... .+.++ +. +
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~--~~~~~~~~ei~~l~s~~~agk-~~~~~~~~l~~~~~~~~~~~~~~~-~~--~ 80 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGH--PAYADGRLRIGALTAATSAGS-TLGEHHPHLTPLAHRVVEPTEAAV-LG--G 80 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTC--HHHHTTSEEEEEEEESSCTTS-BGGGTCTTCGGGTTCBCEECCHHH-HT--T
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcC--CCCCCccEEEEEEECCCcCCC-chhhhcccccccceeeeccCCHHH-hc--C
Confidence 3468999999 899999999998877 7 899999986543200 011100001 1 111111 12333 43 4
Q ss_pred CCEEEEeCCCCccHHHHHHHHcCCCCCeEEE-ecCCCCCHHH-----------------HHHH---HHHHHhCCCeEEEE
Q 017143 75 CDVVVVSTPNMTHYQILMDIINHPKPHHVLV-EKPLCTTVAD-----------------CKKV---VDAARKRPDILVQV 133 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~-EKP~a~~~~e-----------------~~~l---~~~a~~~~~~~~~v 133 (376)
+|+|+.|+|+....+++.++ + +|+-|+. --|+-.+..+ .-|+ .+.. +.. .+..
T Consensus 81 ~DvVf~alg~~~s~~~~~~~-~--~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~~~i-~~~--~iIa 154 (352)
T 2nqt_A 81 HDAVFLALPHGHSAVLAQQL-S--PETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGARDQL-RGT--RRIA 154 (352)
T ss_dssp CSEEEECCTTSCCHHHHHHS-C--TTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHHHHH-TTC--SEEE
T ss_pred CCEEEECCCCcchHHHHHHH-h--CCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCHHHH-hcC--CEEE
Confidence 99999999999999999999 8 6765443 3333322211 0011 1122 222 3555
Q ss_pred eeccccCHHHHHHHHHHHcCCCC-ce
Q 017143 134 GLEYRYMPPVAKLIQIVKSGSIG-QV 158 (376)
Q Consensus 134 ~~~~r~~p~~~~~k~~i~~g~iG-~i 158 (376)
+-++--......++-+++.+.|- ++
T Consensus 155 nPgC~tt~~~lal~PL~~~~~i~~~i 180 (352)
T 2nqt_A 155 VPGCYPTAALLALFPALAADLIEPAV 180 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCSCSEE
T ss_pred cCCHHHHHHHHHHHHHHHcCCCcceE
Confidence 55555577788888888888876 54
No 203
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.21 E-value=0.00045 Score=55.50 Aligned_cols=84 Identities=18% Similarity=0.082 Sum_probs=53.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--CccCCHHHHhhC--CCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVFPGHQELLDS--GLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~--~~~D~V~i~ 81 (376)
..+|+|+|+|.+|...+..+... +.+++ ++|+++++ ++.+.++.|... .-..+.+.+.+. .+.|+|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~---g~~V~-vid~~~~~---~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS---GHSVV-VVDKNEYA---FHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESCGGG---GGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhC---CCeEE-EEECCHHH---HHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 57999999999999988888775 67766 56888874 333322345431 112233333221 248999999
Q ss_pred CCCCccHHHHHHHHc
Q 017143 82 TPNMTHYQILMDIIN 96 (376)
Q Consensus 82 t~~~~h~~~~~~al~ 96 (376)
+++..-...+..+++
T Consensus 92 ~~~~~~~~~~~~~~~ 106 (155)
T 2g1u_A 92 TNDDSTNFFISMNAR 106 (155)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHHH
Confidence 998765555555554
No 204
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=97.21 E-value=0.001 Score=62.67 Aligned_cols=103 Identities=22% Similarity=0.357 Sum_probs=67.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc-CCHHHHhhC-------------
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF-PGHQELLDS------------- 72 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~------------- 72 (376)
-|+-|||+|.+|......|++. +.+|+ ++|++++ +.+++.+. ..+ .| ..+++++++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~---G~~V~-~~D~~~~---kv~~L~~g-~~p--i~epgl~~ll~~~~~~g~l~~ttd~ 81 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH---GVDVL-GVDINQQ---TIDKLQNG-QIS--IEEPGLQEVYEEVLSSGKLKVSTTP 81 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEE-EECSCHH---HHHHHHTT-CCS--SCCTTHHHHHHHHHHTTCEEEESSC
T ss_pred CccEEEeeCHHHHHHHHHHHHC---CCEEE-EEECCHH---HHHHHHCC-CCC--cCCCCHHHHHHhhcccCceEEeCch
Confidence 4789999999999988888885 88977 5799998 55555542 232 23 345555321
Q ss_pred CCCCEEEEeCCCCcc-----------HHHHHH----HHcCCCCCeEEEecCCCCCHHHHHHHHHHH
Q 017143 73 GLCDVVVVSTPNMTH-----------YQILMD----IINHPKPHHVLVEKPLCTTVADCKKVVDAA 123 (376)
Q Consensus 73 ~~~D~V~i~t~~~~h-----------~~~~~~----al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a 123 (376)
.+.|+|+||.|+..+ ...+.+ .++ .| .+++.|- +..+.-++++.+..
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~--~g-~iVV~~S-TV~pgtt~~v~~~i 143 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLK--KG-NTIIVES-TIAPKTMDDFVKPV 143 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCC--TT-EEEEECS-CCCTTHHHHTHHHH
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCC--CC-CEEEEec-CCChhHHHHHHHHH
Confidence 248999999998763 222222 244 45 4666664 66666677776643
No 205
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.21 E-value=0.00028 Score=64.54 Aligned_cols=141 Identities=9% Similarity=0.035 Sum_probs=80.8
Q ss_pred ceeEEEEe-CChhhHHHHHHhh--hhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHH-HHhhCCCCCEEEEe
Q 017143 6 TVKYGIIG-MGMMGREHFINLH--HLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQ-ELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~--~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~D~V~i~ 81 (376)
++||+|+| +|.+|+..++.|. .+ +.++++++.+++... + .+. -.+.++.. .+.+ +.+. ++|+|+.|
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~--~~~elv~i~s~~~~g--~--~~~-~~g~~i~~-~~~~~~~~~--~~DvV~~a 75 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDF--PLHRLHLLASAESAG--Q--RMG-FAESSLRV-GDVDSFDFS--SVGLAFFA 75 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTC--CCSCEEEEECTTTTT--C--EEE-ETTEEEEC-EEGGGCCGG--GCSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCC--CcEEEEEEecCCCCC--C--ccc-cCCcceEE-ecCCHHHhc--CCCEEEEc
Confidence 57999999 7999999999887 44 889999998764321 0 000 00111111 1211 1132 48999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEE-ecCCC-----CCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLV-EKPLC-----TTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~-EKP~a-----~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
+|...+.+.+..+++ +|..|+. --|+. .-+.|... +..+...+..+..+.++.-......++-+.+.+.|
T Consensus 76 ~g~~~s~~~a~~~~~--aG~kvId~Sa~~rd~~~~~~vpevN~--~~i~~~~~~~iIanp~C~tt~~~~~l~pL~~~~~i 151 (340)
T 2hjs_A 76 AAAEVSRAHAERARA--AGCSVIDLSGALEPSVAPPVMVSVNA--ERLASQAAPFLLSSPCAVAAELCEVLAPLLATLDC 151 (340)
T ss_dssp SCHHHHHHHHHHHHH--TTCEEEETTCTTTTTTSCBCCHHHHG--GGGGGSCSSCEEECCCHHHHHHHHHHHHHTTTCCE
T ss_pred CCcHHHHHHHHHHHH--CCCEEEEeCCCCCCCCCCeEEcCcCH--HHHhcCcCCCEEEcCCHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999 6766543 22321 11112211 11111111135555554445556667777676666
Q ss_pred CceEE
Q 017143 156 GQVKM 160 (376)
Q Consensus 156 G~i~~ 160 (376)
-++..
T Consensus 152 ~~~~v 156 (340)
T 2hjs_A 152 RQLNL 156 (340)
T ss_dssp EEEEE
T ss_pred ceEEE
Confidence 44433
No 206
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.20 E-value=0.0013 Score=60.06 Aligned_cols=67 Identities=19% Similarity=0.349 Sum_probs=52.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.||......++.. +.+|+ ++|+++++ + .+.++|+. +.++++++.+ .|+|++++|..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~-~~d~~~~~-~----~~~~~g~~---~~~l~~~l~~--aDvVil~vp~~ 215 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGF---NMRIL-YYSRTRKE-E----VERELNAE---FKPLEDLLRE--SDFVVLAVPLT 215 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCH-H----HHHHHCCE---ECCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEccCHHHHHHHHHHHhC---CCEEE-EECCCcch-h----hHhhcCcc---cCCHHHHHhh--CCEEEECCCCC
Confidence 46899999999999988888775 77866 57888763 2 23345653 4689999987 89999999976
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 216 ~ 216 (334)
T 2dbq_A 216 R 216 (334)
T ss_dssp T
T ss_pred h
Confidence 4
No 207
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=97.20 E-value=0.0015 Score=62.32 Aligned_cols=80 Identities=10% Similarity=0.021 Sum_probs=52.2
Q ss_pred CceeEEEEeCChh-hHHHHHHhhhhc-CCCcEEEEEeCCChhhHHHHHHHHHh----cCCC--CCccCCHHHHhhCCCCC
Q 017143 5 DTVKYGIIGMGMM-GREHFINLHHLR-SQGVSVVCIADPHLQSRQQALKLANA----FDWP--LKVFPGHQELLDSGLCD 76 (376)
Q Consensus 5 ~~~~v~iiG~G~~-g~~~~~~~~~~~-~~~~~~~~v~d~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~l~~~~~D 76 (376)
+++||+|||+|.+ +...+..+.... +-...-+.++|+++++++....+... .+.+ +..++|+++.+++ .|
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~--AD 104 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTD--VD 104 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSS--CS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcC--CC
Confidence 4589999999997 433443444431 11134466899999876554444433 2444 3456799888876 89
Q ss_pred EEEEeCCCCc
Q 017143 77 VVVVSTPNMT 86 (376)
Q Consensus 77 ~V~i~t~~~~ 86 (376)
+|+++.|...
T Consensus 105 ~VViaag~~~ 114 (472)
T 1u8x_X 105 FVMAHIRVGK 114 (472)
T ss_dssp EEEECCCTTH
T ss_pred EEEEcCCCcc
Confidence 9999999743
No 208
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.19 E-value=0.0003 Score=62.10 Aligned_cols=121 Identities=14% Similarity=0.141 Sum_probs=76.6
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
-++.|||+|.+|+..+..|... ++.-+.|++|+.+ ++++++++++.+ ..++.+ + .+.|+|+.+||...
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~---G~~~i~v~nRt~~---ka~~la~~~~~~--~~~~~~--~--~~~DivInaTp~gm 187 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS---GFEKLKIYARNVK---TGQYLAALYGYA--YINSLE--N--QQADILVNVTSIGM 187 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT---TCCCEEEECSCHH---HHHHHHHHHTCE--EESCCT--T--CCCSEEEECSSTTC
T ss_pred CEEEEECCcHHHHHHHHHHHHC---CCCEEEEEeCCHH---HHHHHHHHcCCc--cchhhh--c--ccCCEEEECCCCCc
Confidence 5899999999999998888876 6644558999987 677888887743 222222 2 35899999999876
Q ss_pred cHH-------HHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHH
Q 017143 87 HYQ-------ILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKL 146 (376)
Q Consensus 87 h~~-------~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~ 146 (376)
+.. +....+. .+. ++++= ..++.+. .|.+.|+++ |..+.-|....-..+....
T Consensus 188 ~~~~~~~~~~~~~~~l~--~~~-~v~Dl--vY~P~~T-~ll~~A~~~-G~~~i~Gl~MLv~Qa~~~f 247 (271)
T 1npy_A 188 KGGKEEMDLAFPKAFID--NAS-VAFDV--VAMPVET-PFIRYAQAR-GKQTISGAAVIVLQAVEQF 247 (271)
T ss_dssp TTSTTTTSCSSCHHHHH--HCS-EEEEC--CCSSSSC-HHHHHHHHT-TCEEECHHHHHHHHHHHHH
T ss_pred cCccccCCCCCCHHHcC--CCC-EEEEe--ecCCCCC-HHHHHHHHC-CCEEECCHHHHHHHHHHHH
Confidence 531 2235566 444 33332 2233333 566677454 7777666655443333333
No 209
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.16 E-value=0.0012 Score=59.73 Aligned_cols=82 Identities=17% Similarity=0.271 Sum_probs=51.6
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHhcC---CCCCccCCHHHHhhCCCCC
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANAFD---WPLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~l~~~~~D 76 (376)
|.++++.||+|||+|.+|...+..++.. .-+.-+.++|+++++.+ .+..+..... .+++.+.+..+.+++ .|
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~--~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~--aD 76 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQ--GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRD--AD 76 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTT--CS
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCC--CC
Confidence 7666778999999999999877777665 32333557899987443 2233433211 112222333344554 89
Q ss_pred EEEEeCCCCc
Q 017143 77 VVVVSTPNMT 86 (376)
Q Consensus 77 ~V~i~t~~~~ 86 (376)
+|+++.+...
T Consensus 77 vViia~~~~~ 86 (316)
T 1ldn_A 77 LVVICAGANQ 86 (316)
T ss_dssp EEEECCSCCC
T ss_pred EEEEcCCCCC
Confidence 9999988643
No 210
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.15 E-value=0.00072 Score=62.79 Aligned_cols=68 Identities=18% Similarity=0.353 Sum_probs=52.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+..+..++.. +.+|+ ++|+++.+.+ .+.++|+. .+.+++++++. .|+|++++|..
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~---G~~V~-~~d~~~~~~~----~~~~~G~~--~~~~l~ell~~--aDvV~l~~Plt 258 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPF---DVHLH-YTDRHRLPES----VEKELNLT--WHATREDMYPV--CDVVTLNCPLH 258 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCEEE-EECSSCCCHH----HHHHHTCE--ECSSHHHHGGG--CSEEEECSCCC
T ss_pred CCEEEEEeECHHHHHHHHHHHhC---CCEEE-EEcCCccchh----hHhhcCce--ecCCHHHHHhc--CCEEEEecCCc
Confidence 46899999999999998888876 78876 5788765322 23445653 55789999987 89999999954
No 211
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.15 E-value=0.00085 Score=60.81 Aligned_cols=68 Identities=15% Similarity=0.249 Sum_probs=52.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-ChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
..+|||||+|.||+..+..++.. +.+|+ ++|+ ++++. .+.++|+. ..++++++++. .|+|++++|.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~-~~d~~~~~~~-----~~~~~g~~--~~~~l~ell~~--aDvVil~~p~ 212 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGF---DMDID-YFDTHRASSS-----DEASYQAT--FHDSLDSLLSV--SQFFSLNAPS 212 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEE-EECSSCCCHH-----HHHHHTCE--ECSSHHHHHHH--CSEEEECCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEE-EECCCCcChh-----hhhhcCcE--EcCCHHHHHhh--CCEEEEeccC
Confidence 46899999999999998888875 68876 5788 77631 23345653 45589999986 8999999996
Q ss_pred Cc
Q 017143 85 MT 86 (376)
Q Consensus 85 ~~ 86 (376)
..
T Consensus 213 ~~ 214 (320)
T 1gdh_A 213 TP 214 (320)
T ss_dssp CT
T ss_pred ch
Confidence 53
No 212
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.14 E-value=0.0013 Score=59.36 Aligned_cols=67 Identities=22% Similarity=0.258 Sum_probs=52.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.+|+.....++.. +.+|+ ++|+++++ . .+.++|+. +.++++++.. .|+|++++|..
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~-~~d~~~~~---~--~~~~~g~~---~~~l~ell~~--aDvVvl~~P~~ 207 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAM---GMKVL-AYDILDIR---E--KAEKINAK---AVSLEELLKN--SDVISLHVTVS 207 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT---TCEEE-EECSSCCH---H--HHHHTTCE---ECCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEE-EECCCcch---h--HHHhcCce---ecCHHHHHhh--CCEEEEeccCC
Confidence 46899999999999998888876 78876 57888763 2 13456753 3589999986 89999999964
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 208 ~ 208 (313)
T 2ekl_A 208 K 208 (313)
T ss_dssp T
T ss_pred h
Confidence 3
No 213
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.13 E-value=0.001 Score=61.00 Aligned_cols=69 Identities=25% Similarity=0.293 Sum_probs=52.5
Q ss_pred ceeEEEEeCChhhHHHHHHhh-hhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLH-HLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~-~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
-.+|||||+|.||+..+..++ .. +.+|+ ++|+++++.+.+ .++|+. ..+++++++++ .|+|++++|.
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~---G~~V~-~~d~~~~~~~~~----~~~g~~--~~~~l~ell~~--aDvVil~vp~ 230 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGL---GMKLV-YYDVAPADAETE----KALGAE--RVDSLEELARR--SDCVSVSVPY 230 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CCEEE-EECSSCCCHHHH----HHHTCE--ECSSHHHHHHH--CSEEEECCCC
T ss_pred CCEEEEEEECHHHHHHHHHHHHhc---CCEEE-EECCCCcchhhH----hhcCcE--EeCCHHHHhcc--CCEEEEeCCC
Confidence 368999999999999988887 65 77866 589887643322 234653 44689999987 8999999997
Q ss_pred Cc
Q 017143 85 MT 86 (376)
Q Consensus 85 ~~ 86 (376)
..
T Consensus 231 ~~ 232 (348)
T 2w2k_A 231 MK 232 (348)
T ss_dssp SG
T ss_pred Ch
Confidence 53
No 214
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=97.12 E-value=0.00081 Score=59.98 Aligned_cols=100 Identities=18% Similarity=0.233 Sum_probs=63.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHH-HHh--cCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKL-ANA--FDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
..||+|||+|.||......++ . +++|+ ++|++++.++++.+. ..+ -++ ...+|+++ +++ .|+|+.+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a---G~~V~-v~d~~~~~~~~~~~~l~~~~~~~i--~~~~~~~~-~~~--aDlVieav 81 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S---KHEVV-LQDVSEKALEAAREQIPEELLSKI--EFTTTLEK-VKD--CDIVMEAV 81 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T---TSEEE-EECSCHHHHHHHHHHSCGGGGGGE--EEESSCTT-GGG--CSEEEECC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c---CCEEE-EEECCHHHHHHHHHHHHHHHhCCe--EEeCCHHH-HcC--CCEEEEcC
Confidence 369999999999999888887 6 77865 789999865544432 000 032 35677776 555 89999999
Q ss_pred CCCccHHHHH-HHHcCCCCCeEEEecCCCCCHHHH
Q 017143 83 PNMTHYQILM-DIINHPKPHHVLVEKPLCTTVADC 116 (376)
Q Consensus 83 ~~~~h~~~~~-~al~~~~g~~Vl~EKP~a~~~~e~ 116 (376)
|......... ..++. ..-.|++----+.++.+.
T Consensus 82 pe~~~vk~~l~~~l~~-~~~~IlasntSti~~~~~ 115 (293)
T 1zej_A 82 FEDLNTKVEVLREVER-LTNAPLCSNTSVISVDDI 115 (293)
T ss_dssp CSCHHHHHHHHHHHHT-TCCSCEEECCSSSCHHHH
T ss_pred cCCHHHHHHHHHHHhc-CCCCEEEEECCCcCHHHH
Confidence 9988643332 22331 211244433334555543
No 215
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.10 E-value=0.0021 Score=58.55 Aligned_cols=72 Identities=22% Similarity=0.207 Sum_probs=51.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHH-HHHHHH---hcCCC--CCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQ-ALKLAN---AFDWP--LKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~---~~~~~--~~~~~~~~~~l~~~~~D~V~ 79 (376)
++||+|||+|.+|......++.. ..++ +.++|+++++++. +..+.. ..+.+ +..++|+++.+++ .|+|+
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~--g~~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~--aDiVi 83 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR--ELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTG--ADCVI 83 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCe-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCC--CCEEE
Confidence 47999999999999877777775 3337 7789999886544 222222 22333 3346899888876 89999
Q ss_pred EeC
Q 017143 80 VST 82 (376)
Q Consensus 80 i~t 82 (376)
++.
T Consensus 84 ~a~ 86 (331)
T 1pzg_A 84 VTA 86 (331)
T ss_dssp ECC
T ss_pred Ecc
Confidence 998
No 216
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.10 E-value=0.0011 Score=59.69 Aligned_cols=67 Identities=25% Similarity=0.389 Sum_probs=52.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.+|+.....++.. +.+|+ ++|+++++ +.+.++|+. . .++++++.. .|+|++++|..
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~-~~d~~~~~-----~~~~~~g~~--~-~~l~ell~~--aDvV~l~~p~~ 207 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANAL---GMNIL-LYDPYPNE-----ERAKEVNGK--F-VDLETLLKE--SDVVTIHVPLV 207 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCH-----HHHHHTTCE--E-CCHHHHHHH--CSEEEECCCCS
T ss_pred CceEEEEccCHHHHHHHHHHHHC---CCEEE-EECCCCCh-----hhHhhcCcc--c-cCHHHHHhh--CCEEEEecCCC
Confidence 46899999999999998888876 78876 67888763 123456753 3 489999986 89999999965
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 208 ~ 208 (307)
T 1wwk_A 208 E 208 (307)
T ss_dssp T
T ss_pred h
Confidence 4
No 217
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=97.10 E-value=0.00012 Score=69.06 Aligned_cols=89 Identities=11% Similarity=0.179 Sum_probs=63.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCc---EEEEEeCCChhhHHHHHHHHHhcCCC---CCcc-CCH----HHHhhCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGV---SVVCIADPHLQSRQQALKLANAFDWP---LKVF-PGH----QELLDSGL 74 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~---~~~~v~d~~~~~~~~~~~~~~~~~~~---~~~~-~~~----~~~l~~~~ 74 (376)
+.||.|||+|.+|+..++.+.+. +++ +++ +.|++...+ ++.+..|++ ..+. +++ +++|..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~--~dv~~~~I~-vaD~~~~~~----~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~-- 83 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK--FDIKPSQVT-IIAAEGTKV----DVAQQYGVSFKLQQITPQNYLEVIGSTLEE-- 83 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH--BCCCGGGEE-EEESSCCSC----CHHHHHTCEEEECCCCTTTHHHHTGGGCCT--
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCCceeEEE-Eeccchhhh----hHHhhcCCceeEEeccchhHHHHHHHHhcC--
Confidence 47999999999999999999888 555 444 456665432 222333433 1222 334 345544
Q ss_pred CCEEEEeCCCCccHHHHHHHHcCCCCCeEEE
Q 017143 75 CDVVVVSTPNMTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~ 105 (376)
.|+|+-++++..-.+++..|++ +|.|++-
T Consensus 84 ~DvVIN~s~~~~~l~Im~acle--aGv~YlD 112 (480)
T 2ph5_A 84 NDFLIDVSIGISSLALIILCNQ--KGALYIN 112 (480)
T ss_dssp TCEEEECCSSSCHHHHHHHHHH--HTCEEEE
T ss_pred CCEEEECCccccCHHHHHHHHH--cCCCEEE
Confidence 4999999999999999999999 8899875
No 218
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.10 E-value=0.0029 Score=53.80 Aligned_cols=102 Identities=18% Similarity=0.127 Sum_probs=64.1
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhh--CCCCCEEEEe
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLD--SGLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~--~~~~D~V~i~ 81 (376)
|||.|+|+|.+|...+..|.+. +.+++ ++|++++ +++++++++++. ..+ .+.+.+-+ -.+.|+|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~---g~~v~-vid~~~~---~~~~l~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR---KYGVV-IINKDRE---LCEEFAKKLKAT-IIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT---TCCEE-EEESCHH---HHHHHHHHSSSE-EEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEE-EEECCHH---HHHHHHHHcCCe-EEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 4899999999999998888775 67777 5688887 566666666654 122 23332222 2458999999
Q ss_pred CCCCccHHHHHHHHcC-CCCCeEEEecCCCCCHHHHHHH
Q 017143 82 TPNMTHYQILMDIINH-PKPHHVLVEKPLCTTVADCKKV 119 (376)
Q Consensus 82 t~~~~h~~~~~~al~~-~~g~~Vl~EKP~a~~~~e~~~l 119 (376)
++++.--..+...++. ...++|++ .+.+.+..+.|
T Consensus 73 ~~~d~~n~~~~~~a~~~~~~~~iia---~~~~~~~~~~l 108 (218)
T 3l4b_C 73 TPRDEVNLFIAQLVMKDFGVKRVVS---LVNDPGNMEIF 108 (218)
T ss_dssp CSCHHHHHHHHHHHHHTSCCCEEEE---CCCSGGGHHHH
T ss_pred cCCcHHHHHHHHHHHHHcCCCeEEE---EEeCcchHHHH
Confidence 9987554444444331 12456665 24445554444
No 219
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=97.10 E-value=0.00057 Score=61.80 Aligned_cols=101 Identities=22% Similarity=0.286 Sum_probs=65.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-ChhhHHHHHHHHHhcC---CC--------------CCccC--C
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HLQSRQQALKLANAFD---WP--------------LKVFP--G 65 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~~~~~~~~~~~~~~~---~~--------------~~~~~--~ 65 (376)
++||||.|.|.+|+..++.+... +++++++|-|. +++......+.-+-+| -. +.++. +
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~--~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~d 79 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGR--EEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKD 79 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTC--TTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSS
T ss_pred ceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCC
Confidence 47999999999999999988776 89999999996 4432111111111121 00 11221 2
Q ss_pred HHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCC
Q 017143 66 HQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPL 109 (376)
Q Consensus 66 ~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~ 109 (376)
.+++-. +.++|+|+-||+.....+.+..++++|+ |-|++.-|.
T Consensus 80 p~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGa-kkVvisaps 123 (342)
T 2ep7_A 80 PSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGA-KKVIITAPA 123 (342)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTC-SEEEESSCC
T ss_pred hhhCCccccCCCEEEECCCchhhhhhhHHHHhcCC-CEEEecCCC
Confidence 222211 1259999999999999999999999442 567887774
No 220
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.10 E-value=0.00062 Score=63.24 Aligned_cols=84 Identities=11% Similarity=0.078 Sum_probs=52.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhc--CC--CcEEEEEeCCChh-----hHHHHHHHHH--hc--C--CC--CCccCCHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLR--SQ--GVSVVCIADPHLQ-----SRQQALKLAN--AF--D--WP--LKVFPGHQE 68 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~--~~--~~~~~~v~d~~~~-----~~~~~~~~~~--~~--~--~~--~~~~~~~~~ 68 (376)
++||+|||+|.||......|.+.. .+ ..+|+ +++++++ ..+...+... .+ + ++ +..+++.++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~-~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~e 99 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVR-MWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLAS 99 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEE-EECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEE-EEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHH
Confidence 468999999999998888777651 00 05554 6888876 4332222100 01 1 11 234577888
Q ss_pred HhhCCCCCEEEEeCCCCccHHHHH
Q 017143 69 LLDSGLCDVVVVSTPNMTHYQILM 92 (376)
Q Consensus 69 ~l~~~~~D~V~i~t~~~~h~~~~~ 92 (376)
++.+ .|+|++++|+....+++.
T Consensus 100 a~~~--aDvVilav~~~~~~~vl~ 121 (375)
T 1yj8_A 100 VIND--ADLLIFIVPCQYLESVLA 121 (375)
T ss_dssp HHTT--CSEEEECCCHHHHHHHHH
T ss_pred HHcC--CCEEEEcCCHHHHHHHHH
Confidence 8765 899999999854444443
No 221
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.10 E-value=0.00086 Score=61.46 Aligned_cols=67 Identities=21% Similarity=0.216 Sum_probs=51.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+.....++.. +.+|++ +|++... +.+.+.|+. ..+++++++++ .|+|++++|..
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~-~d~~~~~-----~~~~~~g~~--~~~~l~ell~~--aDiV~l~~Plt 226 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF---GMNVLV-WGRENSK-----ERARADGFA--VAESKDALFEQ--SDVLSVHLRLN 226 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEE-ECSHHHH-----HHHHHTTCE--ECSSHHHHHHH--CSEEEECCCCS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC---CCEEEE-ECCCCCH-----HHHHhcCce--EeCCHHHHHhh--CCEEEEeccCc
Confidence 36899999999999998888876 788775 7876531 223445653 66799999987 89999999954
No 222
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.10 E-value=0.0007 Score=61.96 Aligned_cols=67 Identities=25% Similarity=0.363 Sum_probs=52.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.||+..+..+... +.+|+ ++|++.++ ..+.++|+. .+.+++++++. .|+|++++|..
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~-~~d~~~~~-----~~~~~~g~~--~~~~l~ell~~--aDvV~l~~P~t 234 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF---GFNVL-FYDPYLSD-----GVERALGLQ--RVSTLQDLLFH--SDCVTLHCGLN 234 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEE-EECTTSCT-----THHHHHTCE--ECSSHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEeECHHHHHHHHHHHHC---CCEEE-EECCCcch-----hhHhhcCCe--ecCCHHHHHhc--CCEEEEcCCCC
Confidence 46899999999999998888776 78876 57887653 122345653 56789999987 89999999975
No 223
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.10 E-value=0.00091 Score=61.05 Aligned_cols=65 Identities=22% Similarity=0.365 Sum_probs=50.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
.+|||||+|.||+.....++.. +.+|++ +|+++.+.+ .. . +. ...+++++++++ .|+|++++|..
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~---G~~V~~-~dr~~~~~~----~~-~-g~--~~~~~l~ell~~--sDvV~l~~Plt 238 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF---GLAIHY-HNRTRLSHA----LE-E-GA--IYHDTLDSLLGA--SDIFLIAAPGR 238 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT---TCEEEE-ECSSCCCHH----HH-T-TC--EECSSHHHHHHT--CSEEEECSCCC
T ss_pred CEEEEEEeChhHHHHHHHHHHC---CCEEEE-ECCCCcchh----hh-c-CC--eEeCCHHHHHhh--CCEEEEecCCC
Confidence 6899999999999998888876 788775 788764321 11 1 43 355799999987 89999999954
No 224
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.08 E-value=0.0018 Score=61.23 Aligned_cols=81 Identities=21% Similarity=0.277 Sum_probs=55.2
Q ss_pred CCCCCceeEEEEeCChh--hHHHHHHhhhhcC-CCcEEEEEeCCChhhHHHHHHHHHhcC-CC--CCccCCHHHHhhCCC
Q 017143 1 MAANDTVKYGIIGMGMM--GREHFINLHHLRS-QGVSVVCIADPHLQSRQQALKLANAFD-WP--LKVFPGHQELLDSGL 74 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~--g~~~~~~~~~~~~-~~~~~~~v~d~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~~ 74 (376)
|++ +++||+|||+|.+ |...+..+..... .+ + +.++|++++++++....++.+. .+ +..++|+++++++
T Consensus 1 m~m-~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-e-V~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~d-- 75 (450)
T 3fef_A 1 MSL-DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-T-VALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSA-- 75 (450)
T ss_dssp --C-CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-E-EEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTT--
T ss_pred CCC-CCCEEEEECCChhHhHHHHHHHHHhccccCC-e-EEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcC--
Confidence 554 4689999999995 4566666665311 23 5 5589999987666655554321 11 4567899999987
Q ss_pred CCEEEEeCCCCc
Q 017143 75 CDVVVVSTPNMT 86 (376)
Q Consensus 75 ~D~V~i~t~~~~ 86 (376)
.|+|+++.+...
T Consensus 76 ADfVI~airvG~ 87 (450)
T 3fef_A 76 ADIVIISILPGS 87 (450)
T ss_dssp CSEEEECCCSSC
T ss_pred CCEEEeccccCC
Confidence 899999998653
No 225
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.08 E-value=0.0019 Score=58.26 Aligned_cols=75 Identities=20% Similarity=0.219 Sum_probs=48.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCC-cEEEEEeCCChhhHHHHH-HHHHh---cCCCCCc-cCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQG-VSVVCIADPHLQSRQQAL-KLANA---FDWPLKV-FPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~-~~~~~v~d~~~~~~~~~~-~~~~~---~~~~~~~-~~~~~~~l~~~~~D~V~i 80 (376)
+||+|||+|.+|...+..+... .- .+ +.++|+++++.+... ++... .+.+++. .+++ +.+.+ .|+|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~--g~~~~-V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~--aDvVii 75 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ--GVADD-YVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALAD--ADVVIS 75 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSE-EEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTT--CSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCE-EEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCC--CCEEEE
Confidence 5899999999999888888765 21 35 458899987543221 22111 1111223 4677 55554 899999
Q ss_pred eCCCCcc
Q 017143 81 STPNMTH 87 (376)
Q Consensus 81 ~t~~~~h 87 (376)
+++....
T Consensus 76 av~~~~~ 82 (309)
T 1hyh_A 76 TLGNIKL 82 (309)
T ss_dssp CCSCGGG
T ss_pred ecCCccc
Confidence 9998664
No 226
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.08 E-value=0.0015 Score=59.02 Aligned_cols=81 Identities=21% Similarity=0.215 Sum_probs=49.7
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh---cCCCCCccCCHHHHhhCCCCC
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA---FDWPLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~l~~~~~D 76 (376)
|.+|+++||+|||+|.+|...+..+... +-+.-+.++|+++++++ .+..+... .+.+++.+.+-.+.+++ .|
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~--~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~--aD 76 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQ--SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHD--AD 76 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHH--CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTT--CS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCC--CC
Confidence 6666789999999999999877777665 33445668899987553 23333321 11222233233444655 89
Q ss_pred EEEEeCCCC
Q 017143 77 VVVVSTPNM 85 (376)
Q Consensus 77 ~V~i~t~~~ 85 (376)
+|+++.+..
T Consensus 77 vVvi~ag~~ 85 (317)
T 3d0o_A 77 LVVICAGAA 85 (317)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999998754
No 227
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.06 E-value=0.00099 Score=61.45 Aligned_cols=69 Identities=17% Similarity=0.220 Sum_probs=52.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcE-EEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVS-VVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~-~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
-.+|||||+|.||+..+..+... +.+ |+ ++|+++.+.+ .+.++|+. .+.+++++++. .|+|++++|.
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~---G~~~V~-~~d~~~~~~~----~~~~~g~~--~~~~l~ell~~--aDvV~l~~P~ 231 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPF---NPKELL-YYDYQALPKD----AEEKVGAR--RVENIEELVAQ--ADIVTVNAPL 231 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---CCSEEE-EECSSCCCHH----HHHHTTEE--ECSSHHHHHHT--CSEEEECCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCcEEE-EECCCccchh----HHHhcCcE--ecCCHHHHHhc--CCEEEECCCC
Confidence 46899999999999998888876 675 66 5788775322 23455643 55789999987 8999999997
Q ss_pred Cc
Q 017143 85 MT 86 (376)
Q Consensus 85 ~~ 86 (376)
..
T Consensus 232 t~ 233 (364)
T 2j6i_A 232 HA 233 (364)
T ss_dssp ST
T ss_pred Ch
Confidence 53
No 228
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.06 E-value=0.0053 Score=50.53 Aligned_cols=103 Identities=12% Similarity=0.116 Sum_probs=61.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhh---CCCCCEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLD---SGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~---~~~~D~V~ 79 (376)
..+|+|+|+|.+|...+..|.+. .+.+++ ++|+++++ ++++. +.|+. ..+ ++.+.+.+ -.+.|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~--~g~~V~-vid~~~~~---~~~~~-~~g~~-~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRAR--YGKISL-GIEIREEA---AQQHR-SEGRN-VISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHH--HCSCEE-EEESCHHH---HHHHH-HTTCC-EEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhc--cCCeEE-EEECCHHH---HHHHH-HCCCC-EEEcCCCCHHHHHhccCCCCCCEEE
Confidence 45899999999999988887663 156766 56888874 44433 34654 222 23333322 13589999
Q ss_pred EeCCCCccHHHHHHHHcC-CCCCeEEEecCCCCCHHHHHHH
Q 017143 80 VSTPNMTHYQILMDIINH-PKPHHVLVEKPLCTTVADCKKV 119 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~-~~g~~Vl~EKP~a~~~~e~~~l 119 (376)
+++|+......+...++. +....|++. +.+.+..+.|
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~---~~~~~~~~~l 148 (183)
T 3c85_A 111 LAMPHHQGNQTALEQLQRRNYKGQIAAI---AEYPDQLEGL 148 (183)
T ss_dssp ECCSSHHHHHHHHHHHHHTTCCSEEEEE---ESSHHHHHHH
T ss_pred EeCCChHHHHHHHHHHHHHCCCCEEEEE---ECCHHHHHHH
Confidence 999986544444444432 123456652 4455555433
No 229
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.01 E-value=0.0021 Score=58.27 Aligned_cols=72 Identities=18% Similarity=0.108 Sum_probs=48.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHH-HHHHH---hcCCC--CCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQA-LKLAN---AFDWP--LKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~-~~~~~---~~~~~--~~~~~~~~~~l~~~~~D~V~ 79 (376)
++||+|||+|.+|......++.. .-++ +.++|+++++++.. ..+.. ..+.+ +..++++ +.+++ .|+|+
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~--g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~--aD~Vi 77 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK--NLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAG--ADVVI 77 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC--CCEEE
Confidence 57999999999999877777665 3337 77899998865422 22221 12222 3345788 66665 89999
Q ss_pred EeCC
Q 017143 80 VSTP 83 (376)
Q Consensus 80 i~t~ 83 (376)
++.+
T Consensus 78 ~a~g 81 (322)
T 1t2d_A 78 VTAG 81 (322)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 9983
No 230
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=96.99 E-value=0.0021 Score=58.53 Aligned_cols=67 Identities=25% Similarity=0.497 Sum_probs=52.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+..+..++.. +.+|+ ++|+++.+ ..+.++|+. +.+++++++. .|+|++++|..
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~---G~~V~-~~d~~~~~-----~~~~~~g~~---~~~l~ell~~--aDvV~l~~P~t 230 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF---GMKTI-GYDPIISP-----EVSASFGVQ---QLPLEEIWPL--CDFITVHTPLL 230 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEE-EECSSSCH-----HHHHHTTCE---ECCHHHHGGG--CSEEEECCCCC
T ss_pred cCEEEEEeECHHHHHHHHHHHHC---CCEEE-EECCCcch-----hhhhhcCce---eCCHHHHHhc--CCEEEEecCCC
Confidence 36899999999999998888776 78876 57887752 123456753 3589999987 89999999975
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 231 ~ 231 (335)
T 2g76_A 231 P 231 (335)
T ss_dssp T
T ss_pred H
Confidence 3
No 231
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.98 E-value=0.0023 Score=55.75 Aligned_cols=93 Identities=16% Similarity=0.170 Sum_probs=57.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh-------------------hhHHHHHHHHHhcC--CCCCc--
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL-------------------QSRQQALKLANAFD--WPLKV-- 62 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~-------------------~~~~~~~~~~~~~~--~~~~~-- 62 (376)
..+|.|||+|.+|...+..|... ++.-+.++|++. .+.+.+.+..++.+ +.+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~---Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA---GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH---TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc---CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 46899999999999999999886 664455889987 54333322222222 11111
Q ss_pred --cC--CHHHHhhCCCCCEEEEeCCCCcc-HHHHHHHHcCCCCCeEEE
Q 017143 63 --FP--GHQELLDSGLCDVVVVSTPNMTH-YQILMDIINHPKPHHVLV 105 (376)
Q Consensus 63 --~~--~~~~~l~~~~~D~V~i~t~~~~h-~~~~~~al~~~~g~~Vl~ 105 (376)
++ +.++++.. .|+|+.++++..- ..+...|.+ .|++++.
T Consensus 108 ~~~~~~~~~~~~~~--~DvVi~~~d~~~~~~~l~~~~~~--~~~p~i~ 151 (249)
T 1jw9_B 108 ALLDDAELAALIAE--HDLVLDCTDNVAVRNQLNAGCFA--AKVPLVS 151 (249)
T ss_dssp SCCCHHHHHHHHHT--SSEEEECCSSHHHHHHHHHHHHH--HTCCEEE
T ss_pred ccCCHhHHHHHHhC--CCEEEEeCCCHHHHHHHHHHHHH--cCCCEEE
Confidence 22 34556665 8999999876432 333344555 5666555
No 232
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=96.96 E-value=0.0021 Score=60.23 Aligned_cols=69 Identities=22% Similarity=0.260 Sum_probs=49.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC----------------CCccCCHHHHh
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP----------------LKVFPGHQELL 70 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~l 70 (376)
+||+|||+|.+|......|.+ +.+|+ ++|+++++ .+++.+. +.+ +..++++++.+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~----G~~V~-~~d~~~~~---~~~l~~~-~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~ 71 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL----QNEVT-IVDILPSK---VDKINNG-LSPIQDEYIEYYLKSKQLSIKATLDSKAAY 71 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT----TSEEE-EECSCHHH---HHHHHTT-CCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC----CCEEE-EEECCHHH---HHHHHcC-CCCcCCCCHHHHHHhccCcEEEeCCHHHHh
Confidence 489999999999988777764 36755 57999884 4444332 221 13456777777
Q ss_pred hCCCCCEEEEeCCCCc
Q 017143 71 DSGLCDVVVVSTPNMT 86 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~~ 86 (376)
++ .|+|+||+|+..
T Consensus 72 ~~--aDvviiavpt~~ 85 (402)
T 1dlj_A 72 KE--AELVIIATPTNY 85 (402)
T ss_dssp HH--CSEEEECCCCCE
T ss_pred cC--CCEEEEecCCCc
Confidence 75 899999999985
No 233
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.96 E-value=0.0017 Score=58.86 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=58.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHH----H-hcC---C-CCCccCCHHHHhhCCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLA----N-AFD---W-PLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~----~-~~~---~-~~~~~~~~~~~l~~~~~D 76 (376)
++||+|||+|.+|......|.+. +.+|+ ++++++. +..++.. . .++ + ++..+++.+++.+ +.|
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~---g~~V~-~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~--~~D 73 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT---GHCVS-VVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELET--KPD 73 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT---TCEEE-EECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSS--CCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCeEE-EEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCC--CCC
Confidence 37999999999999888888775 66766 5677652 2222210 0 111 0 1234567766643 489
Q ss_pred EEEEeCCCCccHHHHHHHHcCC-CCCe-EEEecCCC
Q 017143 77 VVVVSTPNMTHYQILMDIINHP-KPHH-VLVEKPLC 110 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~-~g~~-Vl~EKP~a 110 (376)
+|++++|+....+.+......- .+.. |.+-+-+.
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 9999999987666554432210 2333 44566654
No 234
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.95 E-value=0.0013 Score=59.79 Aligned_cols=68 Identities=24% Similarity=0.342 Sum_probs=51.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.||+..+..+... +.+|+ ++|+++++.+. ..++|+. .. ++++++++ .|+|++++|..
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~---G~~V~-~~d~~~~~~~~----~~~~g~~--~~-~l~e~l~~--aDvVi~~vp~~ 221 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPF---GVQRF-LYTGRQPRPEE----AAEFQAE--FV-STPELAAQ--SDFIVVACSLT 221 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCCEE-EEESSSCCHHH----HHTTTCE--EC-CHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEE-EECCCCcchhH----HHhcCce--eC-CHHHHHhh--CCEEEEeCCCC
Confidence 46899999999999988888775 67766 57877653322 2345643 33 89999986 89999999976
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 222 ~ 222 (330)
T 2gcg_A 222 P 222 (330)
T ss_dssp T
T ss_pred h
Confidence 3
No 235
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.94 E-value=0.0037 Score=56.55 Aligned_cols=76 Identities=14% Similarity=0.144 Sum_probs=49.8
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC-----------CCCccCCHHHHhhCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW-----------PLKVFPGHQELLDSG 73 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~ 73 (376)
.++||+|||+|.||......|.+. +.+|+. + ++++. .+++.++ |+ ++..+++.++ +.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~---G~~V~l-~-~~~~~---~~~i~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~-- 85 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA---GHEVIL-I-ARPQH---VQAIEAT-GLRLETQSFDEQVKVSASSDPSA-VQ-- 85 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT---TCEEEE-E-CCHHH---HHHHHHH-CEEEECSSCEEEECCEEESCGGG-GT--
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC---CCeEEE-E-EcHhH---HHHHHhC-CeEEEcCCCcEEEeeeeeCCHHH-cC--
Confidence 368999999999999988888775 677774 4 66663 4444332 21 1224566655 33
Q ss_pred CCCEEEEeCCCCccHHHHH
Q 017143 74 LCDVVVVSTPNMTHYQILM 92 (376)
Q Consensus 74 ~~D~V~i~t~~~~h~~~~~ 92 (376)
+.|+|++++|+....+.+.
T Consensus 86 ~~D~vilavk~~~~~~~l~ 104 (318)
T 3hwr_A 86 GADLVLFCVKSTDTQSAAL 104 (318)
T ss_dssp TCSEEEECCCGGGHHHHHH
T ss_pred CCCEEEEEcccccHHHHHH
Confidence 4899999999985444443
No 236
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=96.92 E-value=0.0023 Score=58.78 Aligned_cols=66 Identities=18% Similarity=0.295 Sum_probs=50.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
.+|||||+|.||+..+..++.. +.+|+ ++|++... +.+.+.|+ .+.+++++++. .|+|++++|...
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f---G~~V~-~~d~~~~~-----~~~~~~g~---~~~~l~ell~~--aDvV~l~~Plt~ 242 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF---RARIR-VFDPWLPR-----SMLEENGV---EPASLEDVLTK--SDFIFVVAAVTS 242 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS---CCEEE-EECSSSCH-----HHHHHTTC---EECCHHHHHHS--CSEEEECSCSSC
T ss_pred CEEEEecCCcccHHHHHhhhhC---CCEEE-EECCCCCH-----HHHhhcCe---eeCCHHHHHhc--CCEEEEcCcCCH
Confidence 5899999999999998888776 78877 57887531 12234464 25789999997 899999999653
No 237
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.91 E-value=0.0072 Score=54.08 Aligned_cols=99 Identities=19% Similarity=0.152 Sum_probs=64.0
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
.||+||| +|.||......+... +.+++ ++|++++. +.++++.+ .|+|++|+|+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~---G~~V~-~~~~~~~~-------------------~~~~~~~~--aDvVilavp~~ 76 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS---GYPIS-ILDREDWA-------------------VAESILAN--ADVVIVSVPIN 76 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT---TCCEE-EECTTCGG-------------------GHHHHHTT--CSEEEECSCGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC---CCeEE-EEECCccc-------------------CHHHHhcC--CCEEEEeCCHH
Confidence 5899999 999999998888775 56755 56876641 35566665 89999999998
Q ss_pred ccHHHHHHHHcCC-CCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeec
Q 017143 86 THYQILMDIINHP-KPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLE 136 (376)
Q Consensus 86 ~h~~~~~~al~~~-~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~ 136 (376)
.-.+++.+....- .+ .|++.. .+......+++.+.. +..++.++.
T Consensus 77 ~~~~vl~~l~~~l~~~-~iv~~~-~svk~~~~~~~~~~~----~~~~v~~hP 122 (298)
T 2pv7_A 77 LTLETIERLKPYLTEN-MLLADL-TSVKREPLAKMLEVH----TGAVLGLHP 122 (298)
T ss_dssp GHHHHHHHHGGGCCTT-SEEEEC-CSCCHHHHHHHHHHC----SSEEEEEEE
T ss_pred HHHHHHHHHHhhcCCC-cEEEEC-CCCCcHHHHHHHHhc----CCCEEeeCC
Confidence 8666665543210 33 366664 234444444444432 245555544
No 238
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.91 E-value=0.0029 Score=57.48 Aligned_cols=73 Identities=25% Similarity=0.214 Sum_probs=48.8
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHH-HHHHH---hcCCC--CCccCCHHHHhhCCCCCEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQA-LKLAN---AFDWP--LKVFPGHQELLDSGLCDVV 78 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~-~~~~~---~~~~~--~~~~~~~~~~l~~~~~D~V 78 (376)
+++||+|||+|.+|......++.. ..++ +.++|+++++++.. ..+.. .+..+ +..++++ +.+++ .|+|
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~--g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~--aD~V 86 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQK--DLGD-VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN--SDVV 86 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCCE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT--CSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCe-EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC--CCEE
Confidence 357999999999999877777665 2337 77899998865431 12221 22222 3445788 56665 8999
Q ss_pred EEeCC
Q 017143 79 VVSTP 83 (376)
Q Consensus 79 ~i~t~ 83 (376)
+++.+
T Consensus 87 I~avg 91 (328)
T 2hjr_A 87 IITAG 91 (328)
T ss_dssp EECCS
T ss_pred EEcCC
Confidence 99984
No 239
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.90 E-value=0.0013 Score=60.06 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=49.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-----------CCccCCHHHHhhCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-----------LKVFPGHQELLDSGL 74 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~ 74 (376)
++||+|||+|.+|......|.+. +.+|+ +++++ + ..+++. +.|+. +..+++.+++ . +
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~---g~~V~-~~~r~-~---~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~-~--~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA---GEAIN-VLARG-A---TLQALQ-TAGLRLTEDGATHTLPVRATHDAAAL-G--E 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT---TCCEE-EECCH-H---HHHHHH-HTCEEEEETTEEEEECCEEESCHHHH-C--C
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEE-EEECh-H---HHHHHH-HCCCEEecCCCeEEEeeeEECCHHHc-C--C
Confidence 57999999999999988888775 56655 56774 3 233333 22321 1245677764 3 4
Q ss_pred CCEEEEeCCCCccHHHH
Q 017143 75 CDVVVVSTPNMTHYQIL 91 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~ 91 (376)
.|+|++++|+....+.+
T Consensus 71 ~D~Vilavk~~~~~~~~ 87 (335)
T 3ghy_A 71 QDVVIVAVKAPALESVA 87 (335)
T ss_dssp CSEEEECCCHHHHHHHH
T ss_pred CCEEEEeCCchhHHHHH
Confidence 89999999986444333
No 240
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.90 E-value=0.0018 Score=61.62 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=52.7
Q ss_pred ceeEEEEeCChhh--HHHHHHhhhhcC-CCcEEEEEeCCChhhHHHHHHHHHh----cCCC--CCccCCHHHHhhCCCCC
Q 017143 6 TVKYGIIGMGMMG--REHFINLHHLRS-QGVSVVCIADPHLQSRQQALKLANA----FDWP--LKVFPGHQELLDSGLCD 76 (376)
Q Consensus 6 ~~~v~iiG~G~~g--~~~~~~~~~~~~-~~~~~~~v~d~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~l~~~~~D 76 (376)
++||+|||+|.+| ...+..+..... ++.+ +.++|+++++++........ .+.+ +..++|+++.+++ .|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~e-V~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~d--AD 79 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGST-VTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIID--AD 79 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCE-EEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT--CS
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCE-EEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCC--CC
Confidence 5799999999965 444445543211 2456 44899999876655444433 2333 3456789888876 89
Q ss_pred EEEEeCCCCcc
Q 017143 77 VVVVSTPNMTH 87 (376)
Q Consensus 77 ~V~i~t~~~~h 87 (376)
+|+++.|....
T Consensus 80 ~VIiaagv~~~ 90 (480)
T 1obb_A 80 FVINTAMVGGH 90 (480)
T ss_dssp EEEECCCTTHH
T ss_pred EEEECCCcccc
Confidence 99999987543
No 241
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.88 E-value=0.008 Score=57.32 Aligned_cols=75 Identities=24% Similarity=0.335 Sum_probs=50.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHh-------cC---------CCCCccCCHHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANA-------FD---------WPLKVFPGHQEL 69 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~-------~~---------~~~~~~~~~~~~ 69 (376)
..||+|||+|.||......++.. +++|+ ++|++++.++++.+..++ .| ...+..++++ .
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~---G~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-~ 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV---GISVV-AVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-E 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT---TCEEE-EECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH-H
Confidence 46899999999999888887764 78865 689999866554331100 01 0013456774 4
Q ss_pred hhCCCCCEEEEeCCCCcc
Q 017143 70 LDSGLCDVVVVSTPNMTH 87 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h 87 (376)
+++ .|+|++++|....
T Consensus 112 ~~~--aDlVIeaVpe~~~ 127 (463)
T 1zcj_A 112 LST--VDLVVEAVFEDMN 127 (463)
T ss_dssp GTT--CSEEEECCCSCHH
T ss_pred HCC--CCEEEEcCCCCHH
Confidence 544 8999999998753
No 242
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=96.88 E-value=0.0012 Score=59.95 Aligned_cols=67 Identities=19% Similarity=0.307 Sum_probs=50.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+.....++.. +.+|+ ++|+++.+.+. +.++|+. +.+++++++. .|+|++++|..
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~-~~d~~~~~~~~----~~~~g~~---~~~l~ell~~--aDvV~l~~P~t 211 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW---GATLQ-YHEAKALDTQT----EQRLGLR---QVACSELFAS--SDFILLALPLN 211 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS---CCEEE-EECSSCCCHHH----HHHHTEE---ECCHHHHHHH--CSEEEECCCCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEE-EECCCCCcHhH----HHhcCce---eCCHHHHHhh--CCEEEEcCCCC
Confidence 46899999999999998888776 78876 57888743222 2344642 4589999987 89999999954
No 243
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=96.86 E-value=0.0019 Score=58.83 Aligned_cols=63 Identities=24% Similarity=0.403 Sum_probs=48.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+.....++.. +.+|+ ++|+++.+ ..+. ..+.++++++++ .|+|++++|..
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~---G~~V~-~~dr~~~~---------~~~~--~~~~sl~ell~~--aDvVil~vP~t 233 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF---GMSVR-YWNRSTLS---------GVDW--IAHQSPVDLARD--SDVLAVCVAAS 233 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEE-EECSSCCT---------TSCC--EECSSHHHHHHT--CSEEEECC---
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEE-EEcCCccc---------ccCc--eecCCHHHHHhc--CCEEEEeCCCC
Confidence 36899999999999988888775 78866 68888752 1232 356899999987 89999999943
No 244
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.86 E-value=0.0011 Score=60.30 Aligned_cols=64 Identities=19% Similarity=0.313 Sum_probs=50.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.||+..+..+... +.+|+ ++|++++.. .++ ..+.++++++++ .|+|++++|..
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~---G~~V~-~~dr~~~~~---------~g~--~~~~~l~ell~~--aDvVil~vP~~ 226 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAF---DCPIS-YFSRSKKPN---------TNY--TYYGSVVELASN--SDILVVACPLT 226 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT---TCCEE-EECSSCCTT---------CCS--EEESCHHHHHHT--CSEEEECSCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEE-EECCCchhc---------cCc--eecCCHHHHHhc--CCEEEEecCCC
Confidence 46899999999999988888775 67765 588887621 143 357889999987 89999999975
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 227 ~ 227 (333)
T 3ba1_A 227 P 227 (333)
T ss_dssp G
T ss_pred h
Confidence 3
No 245
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.85 E-value=0.0018 Score=50.72 Aligned_cols=88 Identities=18% Similarity=0.237 Sum_probs=50.6
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--CccCCHHHHhh--CCCCC
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVFPGHQELLD--SGLCD 76 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~--~~~~D 76 (376)
|...++.+|+|+|+|.+|...+..+... +.+++ ++|+++++ .+.+. +.+... .-..+.+.+.+ -.++|
T Consensus 1 m~~~~~~~v~I~G~G~iG~~~a~~l~~~---g~~v~-~~d~~~~~---~~~~~-~~~~~~~~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFGGSIVKELHRM---GHEVL-AVDINEEK---VNAYA-SYATHAVIANATEENELLSLGIRNFE 72 (144)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHT---TCCCE-EEESCHHH---HHTTT-TTCSEEEECCTTCHHHHHTTTGGGCS
T ss_pred CCCCcCCcEEEECCCHHHHHHHHHHHHC---CCEEE-EEeCCHHH---HHHHH-HhCCEEEEeCCCCHHHHHhcCCCCCC
Confidence 4444456799999999999998888775 56765 56787763 33332 223320 11233443322 13589
Q ss_pred EEEEeCCCCcc--HHHHHHHHc
Q 017143 77 VVVVSTPNMTH--YQILMDIIN 96 (376)
Q Consensus 77 ~V~i~t~~~~h--~~~~~~al~ 96 (376)
+|++++++..+ ...+..+.+
T Consensus 73 ~vi~~~~~~~~~~~~~~~~~~~ 94 (144)
T 2hmt_A 73 YVIVAIGANIQASTLTTLLLKE 94 (144)
T ss_dssp EEEECCCSCHHHHHHHHHHHHH
T ss_pred EEEECCCCchHHHHHHHHHHHH
Confidence 99999997633 333444444
No 246
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.83 E-value=0.001 Score=59.22 Aligned_cols=63 Identities=19% Similarity=0.273 Sum_probs=49.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+.....++.. +.+|++ +|+++++.+ .+ ...+++++++++ .|+|++++|..
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~-~dr~~~~~~---------~~--~~~~~l~ell~~--aDiV~l~~P~t 184 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAF---GMRVIA-YTRSSVDQN---------VD--VISESPADLFRQ--SDFVLIAIPLT 184 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH---TCEEEE-ECSSCCCTT---------CS--EECSSHHHHHHH--CSEEEECCCCC
T ss_pred cchheeeccCchhHHHHHHHHhh---CcEEEE-Eeccccccc---------cc--cccCChHHHhhc--cCeEEEEeecc
Confidence 36899999999999999888887 888775 688775311 12 356799999987 89999999953
No 247
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.82 E-value=0.0042 Score=56.16 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=48.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHH-HHHHH---hc--CCCCCccCCHHHHhhCCCCCEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQA-LKLAN---AF--DWPLKVFPGHQELLDSGLCDVV 78 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~-~~~~~---~~--~~~~~~~~~~~~~l~~~~~D~V 78 (376)
++||+|||+|.+|......+... +. + +.++|+++++++.. ..+.. .. ...+..++++ +.+++ .|+|
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~---g~~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~--aDiV 76 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD---NLAD-VVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISG--SDVV 76 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH---TCCE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT--CSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCce-EEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCC--CCEE
Confidence 57999999999999888777775 44 7 66899998755431 12211 11 2222344777 56655 8999
Q ss_pred EEeCC
Q 017143 79 VVSTP 83 (376)
Q Consensus 79 ~i~t~ 83 (376)
+++.+
T Consensus 77 i~avg 81 (317)
T 2ewd_A 77 IITAS 81 (317)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 99994
No 248
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=96.82 E-value=0.011 Score=49.95 Aligned_cols=109 Identities=19% Similarity=0.189 Sum_probs=78.5
Q ss_pred ceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
.+|+.|+|+ |.||+..... ... ++.+|++..|+... + .+. ++|+|+-.|.|
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~-~~~--~~~elv~~id~~~~-------------------~----~l~--~~DVvIDFT~P 63 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKV-FSE--KGHELVLKVDVNGV-------------------E----ELD--SPDVVIDFSSP 63 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHH-HHH--TTCEEEEEEETTEE-------------------E----ECS--CCSEEEECSCG
T ss_pred cceeEEEEecCHHHHHHHHH-HhC--CCCEEEEEEcCCCc-------------------c----ccc--CCCEEEECCCH
Confidence 489999997 9999987654 444 78999999986431 1 112 48999989999
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHH
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIV 150 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i 150 (376)
..-.+.+..|++ +|+++.+=-.. .+.++..+|.+++ ++ +.+..+ ..|+-.+..+.+++
T Consensus 64 ~a~~~~~~~~~~--~g~~~ViGTTG-~~~~~~~~l~~~a-~~--~~vv~a--pNfSlGvnll~~l~ 121 (228)
T 1vm6_A 64 EALPKTVDLCKK--YRAGLVLGTTA-LKEEHLQMLRELS-KE--VPVVQA--YNFSIGINVLKRFL 121 (228)
T ss_dssp GGHHHHHHHHHH--HTCEEEECCCS-CCHHHHHHHHHHT-TT--SEEEEC--SCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--cCCCEEEeCCC-CCHHHHHHHHHHH-hh--CCEEEe--ccccHHHHHHHHHH
Confidence 999999999999 89998886553 5777777777766 43 455554 45555554444444
No 249
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=96.80 E-value=0.0014 Score=59.74 Aligned_cols=114 Identities=12% Similarity=0.177 Sum_probs=74.5
Q ss_pred CceeEEEEeCChhhHHHHH---HhhhhcCCCcEEEEEeCCChhhHHHHHHHHH-----hcCCCCCccCCHHHHhhCCCCC
Q 017143 5 DTVKYGIIGMGMMGREHFI---NLHHLRSQGVSVVCIADPHLQSRQQALKLAN-----AFDWPLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~---~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~D 76 (376)
..-|+.|.|.|.+|..+.+ .+.+.+ +..++|+++ ++.. .+.+.+ ..|++ .+.|++++++. .+|
T Consensus 21 ~~~~~vi~~~g~~g~~~aKta~gllr~~-~~~~iVgvi-~~~~----Gkd~ge~~~g~~~gip--v~~d~~~al~~-~~d 91 (350)
T 2g0t_A 21 PGTPAAIVAWGQLGTAHAKTTYGLLRHS-RLFKPVCVV-AEHE----GKMASDFVKPVRYDVP--VVSSVEKAKEM-GAE 91 (350)
T ss_dssp TTEEEEEECTTTTTSGGGHHHHHHHHHC-SSEEEEEEE-SSCT----TCBGGGTCC-CCSCCB--EESSHHHHHHT-TCC
T ss_pred cCCCEEEEeCCCCChHHHHHHHHHHhhC-CCCeEEEEe-ecCC----CCcHHHhhCCCCCCce--eeCCHHHHHhc-CCC
Confidence 3578999999998875554 334432 469999999 5432 122221 12444 88999999985 399
Q ss_pred EEEEeCCCCc------cHHHHHHHHcCCCCCeEEE--ecCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 017143 77 VVVVSTPNMT------HYQILMDIINHPKPHHVLV--EKPLCTTVADCKKVVDAARKRPDILVQVG 134 (376)
Q Consensus 77 ~V~i~t~~~~------h~~~~~~al~~~~g~~Vl~--EKP~a~~~~e~~~l~~~a~~~~~~~~~v~ 134 (376)
.++|++.+.. =.+.+.+|++ +|++|.+ +-|++ +-.+|.++|++ +|+.+...
T Consensus 92 ~lvig~a~~gg~l~~~~~~~I~~Al~--~G~nVvsglh~~l~----~~pel~~~A~~-~Gv~i~dv 150 (350)
T 2g0t_A 92 VLIIGVSNPGGYLEEQIATLVKKALS--LGMDVISGLHFKIS----QQTEFLKIAHE-NGTRIIDI 150 (350)
T ss_dssp EEEECCCSCCHHHHHHHHHHHHHHHH--TTCEEEECCCC--C----CHHHHHHHHHH-HTCCEEES
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHHH--cCCcEEeCChhhhh----CCHHHHHHHHH-CCCEEEEe
Confidence 9999874432 2467889999 8999976 33443 33337777844 46666554
No 250
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.79 E-value=0.0074 Score=57.78 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=63.2
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHH-H------hcCC-C----------CCccCCH
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLA-N------AFDW-P----------LKVFPGH 66 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~-~------~~~~-~----------~~~~~~~ 66 (376)
+..||+|||+|.||......+++. +++|+ ++|++++.++++.+.. + +.|. + +...+++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~a---G~~V~-l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASH---GHQVL-LYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDI 79 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT---TCCEE-EECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC---CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCH
Confidence 356899999999999988888774 77765 6899998665543311 0 1121 0 1245677
Q ss_pred HHHhhCCCCCEEEEeCCCCccH--HHHHH---HHcCCCCCeEEEecCCCCCHHH
Q 017143 67 QELLDSGLCDVVVVSTPNMTHY--QILMD---IINHPKPHHVLVEKPLCTTVAD 115 (376)
Q Consensus 67 ~~~l~~~~~D~V~i~t~~~~h~--~~~~~---al~~~~g~~Vl~EKP~a~~~~e 115 (376)
+ .+++ .|+|+.+.|..... ++..+ .++ .+ .|++----+.++.+
T Consensus 80 ~-~~~~--aDlVIeAVpe~~~vk~~v~~~l~~~~~--~~-~IlasntSti~i~~ 127 (483)
T 3mog_A 80 H-ALAA--ADLVIEAASERLEVKKALFAQLAEVCP--PQ-TLLTTNTSSISITA 127 (483)
T ss_dssp G-GGGG--CSEEEECCCCCHHHHHHHHHHHHHHSC--TT-CEEEECCSSSCHHH
T ss_pred H-HhcC--CCEEEEcCCCcHHHHHHHHHHHHHhhc--cC-cEEEecCCCCCHHH
Confidence 5 4554 89999999998543 33333 334 33 45544333455543
No 251
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=96.78 E-value=0.0031 Score=56.90 Aligned_cols=100 Identities=22% Similarity=0.209 Sum_probs=65.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhh-cCCCcEEEEEeCC-ChhhHHHHHHHHH---hc---C-----------C---CCCcc
Q 017143 6 TVKYGIIGMGMMGREHFINLHHL-RSQGVSVVCIADP-HLQSRQQALKLAN---AF---D-----------W---PLKVF 63 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~-~~~~~~~~~v~d~-~~~~~~~~~~~~~---~~---~-----------~---~~~~~ 63 (376)
++||||.|.|.+|+..++.+... ..+++++++|-|. +++ ...-+.+ -+ . + ++.++
T Consensus 1 ~ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~---~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~ 77 (335)
T 1obf_O 1 TIRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPK---TNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVD 77 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHH---HHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHH---HHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEE
Confidence 37999999999999998887653 1258999999996 333 2212221 11 0 0 01122
Q ss_pred --CCHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCC
Q 017143 64 --PGHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPL 109 (376)
Q Consensus 64 --~~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~ 109 (376)
.+.+++-. +.++|+|+-||+-....+.+..++++|+ |-|++--|.
T Consensus 78 ~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGa-kkVviSaps 125 (335)
T 1obf_O 78 ANRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGA-KKVIISAPG 125 (335)
T ss_dssp CCSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTC-SEEEESSCC
T ss_pred EcCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCC-CEEEECCcc
Confidence 13333322 2369999999999999999999999553 346665554
No 252
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=96.75 E-value=0.0034 Score=56.79 Aligned_cols=97 Identities=25% Similarity=0.324 Sum_probs=66.5
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-ChhhHHHHHHHHH---hcC------------C-----CCCcc--
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HLQSRQQALKLAN---AFD------------W-----PLKVF-- 63 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~~~~~~~~~~~~---~~~------------~-----~~~~~-- 63 (376)
+||||+|.|.+|+..++.+.+. ++++++|-|. +.+ ....+.+ .+| + ++.++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~---~~evvaind~~~~~---~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 74 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR---GVEVALINDLTDNK---TLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAV 74 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSCHH---HHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCEEEEEecCCCHH---HHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEec
Confidence 5899999999999999988765 8999999986 333 2222222 122 0 01122
Q ss_pred CCHHHHh-hCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 64 PGHQELL-DSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 64 ~~~~~~l-~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.+.+++- .+.++|+|+-||+...-.+.+.+.+++| -|-|++.-|..
T Consensus 75 ~dp~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aG-akkvVIsaps~ 121 (331)
T 2g82_O 75 KDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPAK 121 (331)
T ss_dssp SSGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCB
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHCC-CCEEEECCCCc
Confidence 1333332 2236899999999999999999999944 25688877765
No 253
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=96.75 E-value=0.0031 Score=57.40 Aligned_cols=103 Identities=23% Similarity=0.342 Sum_probs=66.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+.....++.. +.+|+ ++|+++.. ... +.|+ .+.++++++++ .|+|++++|..
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~---G~~V~-~~d~~~~~---~~~---~~g~---~~~~l~ell~~--aDvV~l~~P~t 205 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF---GMKVL-CYDVVKRE---DLK---EKGC---VYTSLDELLKE--SDVISLHVPYT 205 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCH---HHH---HTTC---EECCHHHHHHH--CSEEEECCCCC
T ss_pred CceEEEECcCHHHHHHHHHHHHC---cCEEE-EECCCcch---hhH---hcCc---eecCHHHHHhh--CCEEEEeCCCC
Confidence 36899999999999998888876 78877 57888763 211 3354 24569999987 89999999953
Q ss_pred --ccH---HHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCC
Q 017143 86 --THY---QILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPD 128 (376)
Q Consensus 86 --~h~---~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~ 128 (376)
.+. .-....++ .| .+++.--= -.+-+.+.|.++. +.++
T Consensus 206 ~~t~~li~~~~l~~mk--~g-ailIN~aR-g~~vd~~aL~~aL-~~g~ 248 (334)
T 2pi1_A 206 KETHHMINEERISLMK--DG-VYLINTAR-GKVVDTDALYRAY-QRGK 248 (334)
T ss_dssp TTTTTCBCHHHHHHSC--TT-EEEEECSC-GGGBCHHHHHHHH-HTTC
T ss_pred hHHHHhhCHHHHhhCC--CC-cEEEECCC-CcccCHHHHHHHH-HhCC
Confidence 211 22334455 33 45555432 2333445566666 4433
No 254
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.75 E-value=0.011 Score=54.48 Aligned_cols=98 Identities=14% Similarity=0.181 Sum_probs=67.1
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhhC---CCCCEE
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLDS---GLCDVV 78 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~---~~~D~V 78 (376)
--+|.|+| +|.+|...+..++.. .+.+++++ ++++++++ +++++|.+ .++ +++.+.+.+ ..+|+|
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~--~g~~Vi~~-~~~~~~~~----~~~~lGad-~vi~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQR--TDLTVIAT-ASRPETQE----WVKSLGAH-HVIDHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHH--CCSEEEEE-CSSHHHHH----HHHHTTCS-EEECTTSCHHHHHHTTCSCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHh--cCCEEEEE-eCCHHHHH----HHHHcCCC-EEEeCCCCHHHHHHHhcCCCceEE
Confidence 35799999 899998877776665 57787764 56666433 34556765 222 344444432 358999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCC
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTT 112 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~ 112 (376)
+-++......+.+.++++.+ |+-|++..|...+
T Consensus 244 id~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~ 276 (363)
T 4dvj_A 244 FSTTHTDKHAAEIADLIAPQ-GRFCLIDDPSAFD 276 (363)
T ss_dssp EECSCHHHHHHHHHHHSCTT-CEEEECSCCSSCC
T ss_pred EECCCchhhHHHHHHHhcCC-CEEEEECCCCccc
Confidence 99998777778888888864 7888887665544
No 255
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.004 Score=57.65 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=64.2
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcC--C-C-cEEEEEeCCChhhH--HHHHHHHHh-----c--C--CC--CCccCCH
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRS--Q-G-VSVVCIADPHLQSR--QQALKLANA-----F--D--WP--LKVFPGH 66 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~--~-~-~~~~~v~d~~~~~~--~~~~~~~~~-----~--~--~~--~~~~~~~ 66 (376)
.+++||+|||+|.||......+.++.. + . -..|-+|.++++.. ..++.+..+ | | +| +..++|+
T Consensus 32 ~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl 111 (391)
T 4fgw_A 32 EKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDL 111 (391)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCH
T ss_pred CCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCH
Confidence 467899999999999987777765410 0 0 12355787776521 012222221 1 2 22 3567899
Q ss_pred HHHhhCCCCCEEEEeCCCCccHHHHHHHHcCC-CCCe-EEEecCC
Q 017143 67 QELLDSGLCDVVVVSTPNMTHYQILMDIINHP-KPHH-VLVEKPL 109 (376)
Q Consensus 67 ~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~-~g~~-Vl~EKP~ 109 (376)
++.+++ .|+|++++|.+.-.+.+.+....- .+.. |.|-|=+
T Consensus 112 ~~al~~--ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 112 IDSVKD--VDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp HHHHTT--CSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred HHHHhc--CCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 999987 899999999988777777653210 3333 4455655
No 256
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.73 E-value=0.0049 Score=55.77 Aligned_cols=74 Identities=22% Similarity=0.200 Sum_probs=48.5
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHH-HHHHHHHh---c--CCCCCccCCHHHHhhCCCCC
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQ-QALKLANA---F--DWPLKVFPGHQELLDSGLCD 76 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~-~~~~~~~~---~--~~~~~~~~~~~~~l~~~~~D 76 (376)
|+++||+|||+|.+|......+... +. + +.++|+++++.+ .+.++... . +..+..++++ +.+++ .|
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~---~~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~--aD 77 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK---ELGD-VVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEG--AD 77 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT---TCCE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTT--CS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC---CCCe-EEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCC--CC
Confidence 4568999999999999877777665 33 6 458899987542 22233221 1 2222345777 56655 89
Q ss_pred EEEEeCCC
Q 017143 77 VVVVSTPN 84 (376)
Q Consensus 77 ~V~i~t~~ 84 (376)
+|+|+...
T Consensus 78 iVIiaag~ 85 (324)
T 3gvi_A 78 VVIVTAGV 85 (324)
T ss_dssp EEEECCSC
T ss_pred EEEEccCc
Confidence 99999753
No 257
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.73 E-value=0.0042 Score=56.12 Aligned_cols=78 Identities=22% Similarity=0.302 Sum_probs=49.6
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh--cCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA--FDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
.+++||+|||+|.+|...+..+... +-+.-+.++|+++++++ .+..+... +..+++.+.+-.+.+++ .|+|++
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~--aDvVii 78 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKD--ADLVVI 78 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTT--CSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCC--CCEEEE
Confidence 4568999999999999877777665 44444668899887554 23344322 22222233333444655 899999
Q ss_pred eCCCC
Q 017143 81 STPNM 85 (376)
Q Consensus 81 ~t~~~ 85 (376)
+.+..
T Consensus 79 ~ag~~ 83 (318)
T 1ez4_A 79 TAGAP 83 (318)
T ss_dssp CCCC-
T ss_pred CCCCC
Confidence 98754
No 258
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=96.72 E-value=0.0044 Score=56.01 Aligned_cols=100 Identities=25% Similarity=0.310 Sum_probs=65.4
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHHHHHHHHHhcCC-------C--------------C
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQQALKLANAFDW-------P--------------L 60 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~~~~~-------~--------------~ 60 (376)
|.++||||-|.|.||+..++++... ++++|++|-|+ +++. ..-+. +|.- . +
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~--~~~evvaInd~~~~~~~---~a~l~-~yDS~hg~~~~~v~~~~~~l~v~Gk~i 82 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGR--KDIEVVAINDPFMDLNH---LCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKV 82 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTCCHHH---HHHHH-HCCTTTCSCSSCEEEETTEEEESSCEE
T ss_pred hhheEEEEeCCchHHHHHHHHHhhC--CCcEEEEEcCCCCChHH---HHHHh-ccCCCCCcCCCCEEEcCCEEEECCEEE
Confidence 3479999999999999999988776 89999999993 4442 22121 1210 0 0
Q ss_pred CccC--CHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 61 KVFP--GHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 61 ~~~~--~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.++. +.+++-. +.++|+|+-||+-..-.+.+..++++|+ |-|++.-|.+
T Consensus 83 ~v~~~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGa-kkVVIsaps~ 134 (345)
T 2b4r_O 83 SVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGA-KKVIMSAPPK 134 (345)
T ss_dssp EEECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTC-SEEEESSCCS
T ss_pred EEEEcCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCC-CEEEECCCCC
Confidence 1111 2222211 1169999999999999999999999553 4467766643
No 259
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.71 E-value=0.0048 Score=55.65 Aligned_cols=75 Identities=19% Similarity=0.182 Sum_probs=50.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC------------CCCccCCHHHHhhCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW------------PLKVFPGHQELLDSGL 74 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~ 74 (376)
+||+|||+|.+|......|.+. +.+|+ ++++++ .+ ++. +.|+ ++..+++.++ +. .
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~---g~~V~-~~~r~~--~~---~i~-~~g~~~~~~~g~~~~~~~~~~~~~~~-~~--~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS---GEDVH-FLLRRD--YE---AIA-GNGLKVFSINGDFTLPHVKGYRAPEE-IG--P 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT---SCCEE-EECSTT--HH---HHH-HTCEEEEETTCCEEESCCCEESCHHH-HC--C
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEE-EEEcCc--HH---HHH-hCCCEEEcCCCeEEEeeceeecCHHH-cC--C
Confidence 7999999999999988888775 56655 567765 22 222 2222 1234566665 33 4
Q ss_pred CCEEEEeCCCCccHHHHHHH
Q 017143 75 CDVVVVSTPNMTHYQILMDI 94 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~a 94 (376)
.|+|++++|+....+.+...
T Consensus 70 ~D~vilavk~~~~~~~l~~l 89 (312)
T 3hn2_A 70 MDLVLVGLKTFANSRYEELI 89 (312)
T ss_dssp CSEEEECCCGGGGGGHHHHH
T ss_pred CCEEEEecCCCCcHHHHHHH
Confidence 89999999998776665544
No 260
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.70 E-value=0.0031 Score=57.50 Aligned_cols=145 Identities=12% Similarity=0.138 Sum_probs=89.4
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc-CCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF-PGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~D~V~i~t~ 83 (376)
++|||||| +|..|...++.|..+ |.++|+.+.+++..-. +..++-..+..+..+. .+.++++.+ +|+|+.|+|
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h--P~~el~~l~S~~~aG~-~~~~~~p~~~~~l~~~~~~~~~~~~~--~Dvvf~alp 87 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH--PEAKITYLSSRTYAGK-KLEEIFPSTLENSILSEFDPEKVSKN--CDVLFTALP 87 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC--TTEEEEEEECSTTTTS-BHHHHCGGGCCCCBCBCCCHHHHHHH--CSEEEECCS
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEeCcccccC-ChHHhChhhccCceEEeCCHHHhhcC--CCEEEECCC
Confidence 79999999 599999999999998 9999999987543311 1111111121111121 245565544 899999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCCCHH--H---------------------HHHHHHHHHhCCCeEEEEeeccccC
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCTTVA--D---------------------CKKVVDAARKRPDILVQVGLEYRYM 140 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~--e---------------------~~~l~~~a~~~~~~~~~v~~~~r~~ 140 (376)
+..-.+++.++ + |. +.++-..+.-.+ + .-|+-+..-+.. .+..+.++.-.
T Consensus 88 ~~~s~~~~~~~-~---g~-~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e~i~~a--~iIANPgC~~t 160 (351)
T 1vkn_A 88 AGASYDLVREL-K---GV-KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHREEIKNA--QVVGNPGCYPT 160 (351)
T ss_dssp TTHHHHHHTTC-C---SC-EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHHHHTTC--SEEECCCHHHH
T ss_pred cHHHHHHHHHh-C---CC-EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHHHhccC--CEEeCCChHHH
Confidence 99888888877 3 33 355554432111 1 122333321332 35555555556
Q ss_pred HHHHHHHHHHHcCCCC--ceEEEE
Q 017143 141 PPVAKLIQIVKSGSIG--QVKMVA 162 (376)
Q Consensus 141 p~~~~~k~~i~~g~iG--~i~~~~ 162 (376)
-....++-+++.|.|. +|..-.
T Consensus 161 ~~~laL~PL~~~~~i~~~~iiv~t 184 (351)
T 1vkn_A 161 SVILALAPALKHNLVDPETILVDA 184 (351)
T ss_dssp HHHHHHHHHHHTTCSCCSEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEE
Confidence 6788889999998887 654333
No 261
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.67 E-value=0.0046 Score=56.29 Aligned_cols=66 Identities=17% Similarity=0.303 Sum_probs=50.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.||+..+..++.. +.+|+ ++|+++++. + .++ + ...++++++++. .|+|++++|..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~-~~d~~~~~~--~----~~~-~--~~~~~l~ell~~--aDvV~l~~p~~ 210 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGF---GAKVI-TYDIFRNPE--L----EKK-G--YYVDSLDDLYKQ--ADVISLHVPDV 210 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCHH--H----HHT-T--CBCSCHHHHHHH--CSEEEECSCCC
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEE-EECCCcchh--H----Hhh-C--eecCCHHHHHhh--CCEEEEcCCCc
Confidence 36899999999999998888876 78876 578887632 1 222 3 244589999986 89999999965
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 211 ~ 211 (333)
T 1j4a_A 211 P 211 (333)
T ss_dssp G
T ss_pred H
Confidence 3
No 262
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=95.69 E-value=0.00028 Score=59.47 Aligned_cols=67 Identities=22% Similarity=0.211 Sum_probs=47.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
+.+||+|||+|.||..+...+.+. +.+++ +++++++ . +.+. ..++. .. +.+++++. .|+|++++|+
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~---G~~V~-~~~r~~~-~---~~~~-~~g~~--~~-~~~~~~~~--aDvVilav~~ 83 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC---GYSVV-FGSRNPQ-V---SSLL-PRGAE--VL-CYSEAASR--SDVIVLAVHR 83 (201)
Confidence 357899999999999988888764 56655 5788765 2 2222 23543 44 67777765 8999999997
Q ss_pred C
Q 017143 85 M 85 (376)
Q Consensus 85 ~ 85 (376)
+
T Consensus 84 ~ 84 (201)
T 2yjz_A 84 E 84 (201)
Confidence 5
No 263
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.64 E-value=0.0039 Score=56.47 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=47.7
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHhcC---CCCCccC-CHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANAFD---WPLKVFP-GHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~~~---~~~~~~~-~~~~~l~~~~~D~V~ 79 (376)
+.+||+|||+|.+|...+..++.. +-+.-+.++|+++++++ .+.++..... .+++.++ +++ .+++ .|+|+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~-a~~~--aDvVv 78 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYE-DCKD--ADIVC 78 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGG-GGTT--CSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHH-HhCC--CCEEE
Confidence 468999999999999888888776 44434557899887543 2233433211 1122333 443 4554 89999
Q ss_pred EeCCC
Q 017143 80 VSTPN 84 (376)
Q Consensus 80 i~t~~ 84 (376)
|+...
T Consensus 79 i~ag~ 83 (326)
T 3pqe_A 79 ICAGA 83 (326)
T ss_dssp ECCSC
T ss_pred Eeccc
Confidence 98753
No 264
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.62 E-value=0.0081 Score=55.29 Aligned_cols=143 Identities=13% Similarity=0.085 Sum_probs=85.9
Q ss_pred ceeEEEEe-CChhhHHHHH-HhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc--CCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIG-MGMMGREHFI-NLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF--PGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~-~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~D~V~i~ 81 (376)
|+||||+| +|.+|+..+. .+.+..-+.++++.+..++.- +.+....|.++... ++.++ ++ ++|+|+.|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G-----~~v~~~~g~~i~~~~~~~~~~-~~--~~DvVf~a 72 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG-----QAAPSFGGTTGTLQDAFDLEA-LK--ALDIIVTC 72 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT-----SBCCGGGTCCCBCEETTCHHH-HH--TCSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC-----CCccccCCCceEEEecCChHH-hc--CCCEEEEC
Confidence 36999999 8999999998 444431135677766654321 11110112222222 24444 34 49999999
Q ss_pred CCCCccHHHHHHHHcCCCCC-eEEEecCCCCC--------HHHH-HHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH
Q 017143 82 TPNMTHYQILMDIINHPKPH-HVLVEKPLCTT--------VADC-KKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK 151 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~-~Vl~EKP~a~~--------~~e~-~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~ 151 (376)
+|.....+++..+++ +|. -+.+.-|.+.- +.|. .+-++.++.+ |+.+..+-++.-......++-+.+
T Consensus 73 ~g~~~s~~~a~~~~~--~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~-g~~~Ianp~Cttt~~~~al~pL~~ 149 (367)
T 1t4b_A 73 QGGDYTNEIYPKLRE--SGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNN-GIRTFVGGNCTVSLMLMSLGGLFA 149 (367)
T ss_dssp SCHHHHHHHHHHHHH--TTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHT-TCCEEEECCHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHH--CCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhc-CCCEEEeCCHHHHHHHHHHHHHHH
Confidence 999999999999999 664 47887665521 1222 1222222123 434555666666777778888888
Q ss_pred cCCCCceE
Q 017143 152 SGSIGQVK 159 (376)
Q Consensus 152 ~g~iG~i~ 159 (376)
.+.|-++.
T Consensus 150 ~~~I~~~~ 157 (367)
T 1t4b_A 150 NDLVDWVS 157 (367)
T ss_dssp TTCEEEEE
T ss_pred cCCCcEEE
Confidence 76554443
No 265
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.62 E-value=0.0071 Score=57.27 Aligned_cols=80 Identities=19% Similarity=0.112 Sum_probs=52.7
Q ss_pred ceeEEEEeCChh-hHHHHHHhhhh-cCCCcEEEEEeCCCh--hhHHHHHHHHHh----cCCC--CCccCCHHHHhhCCCC
Q 017143 6 TVKYGIIGMGMM-GREHFINLHHL-RSQGVSVVCIADPHL--QSRQQALKLANA----FDWP--LKVFPGHQELLDSGLC 75 (376)
Q Consensus 6 ~~~v~iiG~G~~-g~~~~~~~~~~-~~~~~~~~~v~d~~~--~~~~~~~~~~~~----~~~~--~~~~~~~~~~l~~~~~ 75 (376)
++||+|||+|.+ |...+..+... .+-...-+.++|+++ ++.+....++.. .+.+ +..++|+++.+++ .
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g--A 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG--A 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT--C
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC--C
Confidence 689999999997 55554445442 111134466899999 865543334433 3444 3446799888886 8
Q ss_pred CEEEEeCCCCcc
Q 017143 76 DVVVVSTPNMTH 87 (376)
Q Consensus 76 D~V~i~t~~~~h 87 (376)
|+|+++.+....
T Consensus 85 D~VVitagv~~~ 96 (450)
T 1s6y_A 85 DFVTTQFRVGGL 96 (450)
T ss_dssp SEEEECCCTTHH
T ss_pred CEEEEcCCCCCC
Confidence 999999997543
No 266
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.61 E-value=0.0021 Score=58.12 Aligned_cols=80 Identities=20% Similarity=0.326 Sum_probs=43.9
Q ss_pred CCCC-CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh--cCCCCCcc-CCHHHHhhCCCC
Q 017143 1 MAAN-DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA--FDWPLKVF-PGHQELLDSGLC 75 (376)
Q Consensus 1 m~~~-~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~ 75 (376)
|.|+ +++||+|||+|.+|...+..+... +-+.-+.++|+++++++ .+.++... +..+++.. ++++ .+++ .
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~-a~~~--a 75 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYS-DVKD--C 75 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGG-GGTT--C
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHH-HhCC--C
Confidence 4433 368999999999999877777665 33334557899886432 23333322 11111122 3443 4554 8
Q ss_pred CEEEEeCCCC
Q 017143 76 DVVVVSTPNM 85 (376)
Q Consensus 76 D~V~i~t~~~ 85 (376)
|+|+|+.+..
T Consensus 76 DvVii~~g~p 85 (318)
T 1y6j_A 76 DVIVVTAGAN 85 (318)
T ss_dssp SEEEECCCC-
T ss_pred CEEEEcCCCC
Confidence 9999998864
No 267
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.61 E-value=0.0085 Score=54.75 Aligned_cols=91 Identities=14% Similarity=0.136 Sum_probs=61.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhh----CCCCCEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLD----SGLCDVVV 79 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~----~~~~D~V~ 79 (376)
-+|.|+|+|.+|...+..++.. .+.++++ +++++++++ +++++|.+ .++ +++.+.+. ...+|+|+
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~--g~~~Vi~-~~~~~~~~~----~~~~lGa~-~~i~~~~~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAV--SAARVIA-VDLDDDRLA----LAREVGAD-AAVKSGAGAADAIRELTGGQGATAVF 244 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CCCEEEE-EESCHHHHH----HHHHTTCS-EEEECSTTHHHHHHHHHGGGCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEE-EcCCHHHHH----HHHHcCCC-EEEcCCCcHHHHHHHHhCCCCCeEEE
Confidence 4799999999999877776666 5677775 466776433 45566765 222 22322222 23699999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
-++......+.+.++++.+ |+-|++-
T Consensus 245 d~~G~~~~~~~~~~~l~~~-G~iv~~G 270 (345)
T 3jv7_A 245 DFVGAQSTIDTAQQVVAVD-GHISVVG 270 (345)
T ss_dssp ESSCCHHHHHHHHHHEEEE-EEEEECS
T ss_pred ECCCCHHHHHHHHHHHhcC-CEEEEEC
Confidence 9999887888888888743 6666654
No 268
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.59 E-value=0.0024 Score=57.74 Aligned_cols=66 Identities=20% Similarity=0.317 Sum_probs=49.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
-.+|||||+|.||+.....++.. +.+|++ +|+++.. .. .+. ...+.++++++++ .|+|++++|.
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~-~dr~~~~---~~------~~~~~~~~~~l~ell~~--aDvV~l~lPl 204 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF---GMKVLG-VSRSGRE---RA------GFDQVYQLPALNKMLAQ--ADVIVSVLPA 204 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEE-ECSSCCC---CT------TCSEEECGGGHHHHHHT--CSEEEECCCC
T ss_pred cceEEEEEECHHHHHHHHHHHhC---CCEEEE-EcCChHH---hh------hhhcccccCCHHHHHhh--CCEEEEeCCC
Confidence 36899999999999998888876 888774 6887642 11 111 1235789999987 8999999995
Q ss_pred Cc
Q 017143 85 MT 86 (376)
Q Consensus 85 ~~ 86 (376)
..
T Consensus 205 t~ 206 (324)
T 3hg7_A 205 TR 206 (324)
T ss_dssp CS
T ss_pred CH
Confidence 43
No 269
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.59 E-value=0.0046 Score=56.23 Aligned_cols=65 Identities=25% Similarity=0.435 Sum_probs=49.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..++||||+|.+|+.....++.. +.++++ +|+.... . ..+.++ .+.+++++|++ .|+|++++|-.
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~f---g~~v~~-~d~~~~~--~----~~~~~~---~~~~l~ell~~--sDivslh~Plt 205 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAF---GMKVLC-YDVVKRE--D----LKEKGC---VYTSLDELLKE--SDVISLHVPYT 205 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEE-ECSSCCH--H----HHHTTC---EECCHHHHHHH--CSEEEECCCCC
T ss_pred CcEEEEECcchHHHHHHHhhccc---Cceeee-cCCccch--h----hhhcCc---eecCHHHHHhh--CCEEEEcCCCC
Confidence 35899999999999988888776 889875 6776542 1 122343 46899999998 79999999943
No 270
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.59 E-value=0.0065 Score=54.66 Aligned_cols=72 Identities=25% Similarity=0.168 Sum_probs=48.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHH-HHHHHHh---c--CCCCCccCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQ-ALKLANA---F--DWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~~---~--~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
+||+|||+|.+|...+..++.. +.++ +.++|+++++++. +.++... . ...+..++++ +.+++ .|+|++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~--g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~--aD~Vi~ 76 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK--ELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN--SDVIVV 76 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT--CSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC--CCEEEE
Confidence 6999999999999887777765 3347 7789999875532 2233221 1 2222334788 55665 899999
Q ss_pred eCCC
Q 017143 81 STPN 84 (376)
Q Consensus 81 ~t~~ 84 (376)
+.+.
T Consensus 77 a~g~ 80 (309)
T 1ur5_A 77 TSGA 80 (309)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9754
No 271
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=96.59 E-value=0.0073 Score=55.65 Aligned_cols=147 Identities=12% Similarity=0.106 Sum_probs=89.6
Q ss_pred CceeEEEEeC-ChhhHHHHH-HhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--CCccCCHHHHhhCCCCCEEEE
Q 017143 5 DTVKYGIIGM-GMMGREHFI-NLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--LKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~-~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~D~V~i 80 (376)
.++||||||+ |..|...++ .|.++.-+.++++.+.+++.- +.+..-.+.. +.-.++.++ ++ ++|+|+.
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG-----~~~~~~~~~~~~v~~~~~~~~-~~--~vDvvf~ 74 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAG-----GKAPSFAKNETTLKDATSIDD-LK--KCDVIIT 74 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTT-----SBCCTTCCSCCBCEETTCHHH-HH--TCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcC-----CCHHHcCCCceEEEeCCChhH-hc--CCCEEEE
Confidence 3689999995 888999998 777772237898888776322 1111001111 111123334 34 4999999
Q ss_pred eCCCCccHHHHHHHHcCCCCC-eEEEecCCCCC--------HHHH-HHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHH
Q 017143 81 STPNMTHYQILMDIINHPKPH-HVLVEKPLCTT--------VADC-KKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIV 150 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~-~Vl~EKP~a~~--------~~e~-~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i 150 (376)
|+|+..-.+.+.++++ +|. -+.+.-|.+.- +.|. .+-++.++++ ++.+..+.++.-.-....++-+.
T Consensus 75 a~~~~~s~~~~~~~~~--~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~-~i~~Ianp~C~tt~~~l~L~pL~ 151 (377)
T 3uw3_A 75 CQGGDYTNDVFPKLRA--AGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVN-GTKNFIGGNCTVSLMLMALGGLF 151 (377)
T ss_dssp CSCHHHHHHHHHHHHH--TTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHT-TCCEEEECCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHH--CCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhc-CCcEEEcCCHHHHHHHHHHHHHH
Confidence 9999998999999999 775 47787775421 1122 1222333123 54445566665566677778888
Q ss_pred HcCCCCceEEEE
Q 017143 151 KSGSIGQVKMVA 162 (376)
Q Consensus 151 ~~g~iG~i~~~~ 162 (376)
+.+.|-++....
T Consensus 152 ~~~~I~~i~v~t 163 (377)
T 3uw3_A 152 RENLVDWMTAMT 163 (377)
T ss_dssp HTTCEEEEEEEE
T ss_pred HhCCCCEEEEee
Confidence 876665543333
No 272
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.58 E-value=0.004 Score=55.27 Aligned_cols=74 Identities=23% Similarity=0.198 Sum_probs=52.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc-----CCCCCc--cCCHHHHhhCCCCCEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF-----DWPLKV--FPGHQELLDSGLCDVV 78 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~l~~~~~D~V 78 (376)
.-++.|+|+|.+|+..+..|... +++-+.|++|+.++ ++++++++ ++.+.. ++++++.+.+ .|+|
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~---G~~~v~i~~R~~~~---a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~--~DiV 198 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH---GVQKLQVADLDTSR---AQALADVINNAVGREAVVGVDARGIEDVIAA--ADGV 198 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSSHHH---HHHHHHHHHHHHTSCCEEEECSTTHHHHHHH--SSEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHC---CCCEEEEEECCHHH---HHHHHHHHHhhcCCceEEEcCHHHHHHHHhc--CCEE
Confidence 35899999999999988888886 67445588999884 44554433 222223 3478888876 8999
Q ss_pred EEeCCCCcc
Q 017143 79 VVSTPNMTH 87 (376)
Q Consensus 79 ~i~t~~~~h 87 (376)
+-+||-..+
T Consensus 199 InaTp~Gm~ 207 (283)
T 3jyo_A 199 VNATPMGMP 207 (283)
T ss_dssp EECSSTTST
T ss_pred EECCCCCCC
Confidence 999996554
No 273
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.56 E-value=0.0067 Score=55.73 Aligned_cols=100 Identities=10% Similarity=0.111 Sum_probs=66.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|+|+|+|.+|...+..+... +.+|+ ++|++++ ++++++++++.. . -+.++++.. +.|+++.|....
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~---GakVv-v~D~~~~---~l~~~a~~~ga~--~-v~~~~ll~~-~~DIvip~a~~~ 241 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTE---GAKLV-VTDVNKA---AVSAAVAEEGAD--A-VAPNAIYGV-TCDIFAPCALGA 241 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHH---HHHHHHHHHCCE--E-CCGGGTTTC-CCSEEEECSCSC
T ss_pred cCEEEEECchHHHHHHHHHHHHC---CCEEE-EEcCCHH---HHHHHHHHcCCE--E-EChHHHhcc-CCcEeeccchHH
Confidence 46899999999999988888776 78988 9999987 566777777743 3 355677663 489998876543
Q ss_pred -ccHHHHHHHHcCCCCCeEEEecCCCCC-HHHHHHHHH
Q 017143 86 -THYQILMDIINHPKPHHVLVEKPLCTT-VADCKKVVD 121 (376)
Q Consensus 86 -~h~~~~~~al~~~~g~~Vl~EKP~a~~-~~e~~~l~~ 121 (376)
...+. .+.+. ..+++|.--... .+++.++.+
T Consensus 242 ~I~~~~-~~~lg----~~iV~e~An~p~t~~ea~~~L~ 274 (364)
T 1leh_A 242 VLNDFT-IPQLK----AKVIAGSADNQLKDPRHGKYLH 274 (364)
T ss_dssp CBSTTH-HHHCC----CSEECCSCSCCBSSHHHHHHHH
T ss_pred HhCHHH-HHhCC----CcEEEeCCCCCcccHHHHHHHH
Confidence 22232 23333 457888654332 235555443
No 274
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.55 E-value=0.0043 Score=60.25 Aligned_cols=100 Identities=19% Similarity=0.328 Sum_probs=64.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.+|......++.. +.+|+ ++|++... +. +.+.|+. .. +++++++. .|+|++++|..
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~---G~~V~-~~d~~~~~-~~----a~~~g~~--~~-~l~e~~~~--aDvV~l~~P~~ 207 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF---GAYVV-AYDPYVSP-AR----AAQLGIE--LL-SLDDLLAR--ADFISVHLPKT 207 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEE-EECTTSCH-HH----HHHHTCE--EC-CHHHHHHH--CSEEEECCCCS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CCEEE-EECCCCCh-hH----HHhcCcE--Ec-CHHHHHhc--CCEEEECCCCc
Confidence 46899999999999998888775 77876 57887642 22 3345754 33 79999987 89999999976
Q ss_pred -ccHHHH----HHHHcCCCCCeEEEecCCCCCHHHHHHHHHHH
Q 017143 86 -THYQIL----MDIINHPKPHHVLVEKPLCTTVADCKKVVDAA 123 (376)
Q Consensus 86 -~h~~~~----~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a 123 (376)
.-..++ ...++ .| .+++.-- .-.+-+..+|.++.
T Consensus 208 ~~t~~~i~~~~~~~~k--~g-~ilin~a-rg~iv~~~aL~~al 246 (529)
T 1ygy_A 208 PETAGLIDKEALAKTK--PG-VIIVNAA-RGGLVDEAALADAI 246 (529)
T ss_dssp TTTTTCBCHHHHTTSC--TT-EEEEECS-CTTSBCHHHHHHHH
T ss_pred hHHHHHhCHHHHhCCC--CC-CEEEECC-CCchhhHHHHHHHH
Confidence 222222 22344 33 4555433 22333344555555
No 275
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.51 E-value=0.0067 Score=54.98 Aligned_cols=80 Identities=21% Similarity=0.267 Sum_probs=50.3
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHH-HHHHHHh--cCCCCCccCCHHHHhhCCCCCEEE
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQ-ALKLANA--FDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
.++++||+|||+|.+|...+..+... +-+.-+.++|+++++++. +.++... +..+++.+.+-.+.+++ .|+|+
T Consensus 6 ~~~~~KI~IiGaG~vG~~la~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~--aDvVi 81 (326)
T 2zqz_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKD--ADLVV 81 (326)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGG--CSEEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCC--CCEEE
Confidence 45679999999999999877777665 444446688998875432 3333322 22222233333444655 89999
Q ss_pred EeCCCCc
Q 017143 80 VSTPNMT 86 (376)
Q Consensus 80 i~t~~~~ 86 (376)
++.+...
T Consensus 82 i~ag~~~ 88 (326)
T 2zqz_A 82 ITAGAPQ 88 (326)
T ss_dssp ECCCCC-
T ss_pred EcCCCCC
Confidence 9987543
No 276
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.51 E-value=0.03 Score=52.99 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=60.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHH-----HHHHHHhcCCC----------CCccCCHHHHh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQ-----ALKLANAFDWP----------LKVFPGHQELL 70 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-----~~~~~~~~~~~----------~~~~~~~~~~l 70 (376)
..||+|||+|.||......+++. +++|+ ++|+++++... .+++.++-.++ +...+|++ .+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a---G~~V~-l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al 128 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA---GIETF-LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KL 128 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCeEE-EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HH
Confidence 46899999999999988888774 88866 68999873210 11222221111 13467775 45
Q ss_pred hCCCCCEEEEeCCCCccH--HHHHHHHcCCCCCeEEEecCCCCCHHH
Q 017143 71 DSGLCDVVVVSTPNMTHY--QILMDIINHPKPHHVLVEKPLCTTVAD 115 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~~h~--~~~~~al~~~~g~~Vl~EKP~a~~~~e 115 (376)
++ .|+|+.++|..... .+..+..+......|++----+.++.+
T Consensus 129 ~~--aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ 173 (460)
T 3k6j_A 129 SN--CDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNE 173 (460)
T ss_dssp TT--CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHH
T ss_pred cc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHH
Confidence 44 89999999987543 333332221112345554333455543
No 277
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.50 E-value=0.0038 Score=56.00 Aligned_cols=63 Identities=21% Similarity=0.272 Sum_probs=49.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.||+.....++.. +.+++ ++|++++ + . +. ..+.+++++++. .|+|++++|..
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~-~~dr~~~--~-------~-~~--~~~~~l~ell~~--aDvV~l~~P~~ 185 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAAL---GAQVR-GFSRTPK--E-------G-PW--RFTNSLEEALRE--ARAAVCALPLN 185 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHT---TCEEE-EECSSCC--C-------S-SS--CCBSCSHHHHTT--CSEEEECCCCS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEE-EECCCcc--c-------c-Cc--ccCCCHHHHHhh--CCEEEEeCcCc
Confidence 46899999999999988888876 78876 5788764 1 1 32 256789999987 89999999976
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 186 ~ 186 (303)
T 1qp8_A 186 K 186 (303)
T ss_dssp T
T ss_pred h
Confidence 4
No 278
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.49 E-value=0.0036 Score=56.36 Aligned_cols=62 Identities=27% Similarity=0.417 Sum_probs=49.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.||+.....++.. +.+++ ++|+++++. . + .+.+++++++. .|+|++++|..
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~-~~d~~~~~~---~-------~---~~~~l~ell~~--aDvV~l~~p~~ 204 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAF---GMRVV-YHARTPKPL---P-------Y---PFLSLEELLKE--ADVVSLHTPLT 204 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCSS---S-------S---CBCCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEEECHHHHHHHHHHHHC---CCEEE-EECCCCccc---c-------c---ccCCHHHHHhh--CCEEEEeCCCC
Confidence 46899999999999998888876 68876 588877631 1 2 35789999987 89999999976
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 205 ~ 205 (311)
T 2cuk_A 205 P 205 (311)
T ss_dssp T
T ss_pred h
Confidence 3
No 279
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=96.48 E-value=0.0059 Score=56.09 Aligned_cols=142 Identities=11% Similarity=0.087 Sum_probs=87.0
Q ss_pred eeEEEEeC-ChhhHHHHH-HhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC---CHHHHhhCCCCCEEEEe
Q 017143 7 VKYGIIGM-GMMGREHFI-NLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP---GHQELLDSGLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~-~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~D~V~i~ 81 (376)
+||||||+ |..|...++ .|.++.-+.++++.+.+++.- +.+..-.|.. ..+. +.++ ++ ++|+|+.|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG-----~~~~~~~~~~-~~~~~~~~~~~-~~--~~Dvvf~a 71 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG-----VPAPNFGKDA-GMLHDAFDIES-LK--QLDAVITC 71 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT-----SBCCCSSSCC-CBCEETTCHHH-HT--TCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC-----cCHHHhCCCc-eEEEecCChhH-hc--cCCEEEEC
Confidence 68999995 889999998 777772237899888776521 1111001111 1222 3333 33 49999999
Q ss_pred CCCCccHHHHHHHHcCCCCC-eEEEecCCCC--C------HHHHH-HHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH
Q 017143 82 TPNMTHYQILMDIINHPKPH-HVLVEKPLCT--T------VADCK-KVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK 151 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~-~Vl~EKP~a~--~------~~e~~-~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~ 151 (376)
+|+..-.+.+.++++ +|. -+.+.-|.+. + +.|.. +-++.++++ ++.+..+.++.-.-....++-+.+
T Consensus 72 ~~~~~s~~~~~~~~~--~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~-~i~~Ianp~C~tt~~~l~L~pL~~ 148 (370)
T 3pzr_A 72 QGGSYTEKVYPALRQ--AGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHH-GTKTFVGGNCTVSLMLMALGGLYE 148 (370)
T ss_dssp SCHHHHHHHHHHHHH--TTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHT-TCCEEEECCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHH--CCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhc-CCcEEEcCChHHHHHHHHHHHHHH
Confidence 999988999999999 775 4777777542 1 12221 222333123 544455666555566677777888
Q ss_pred cCCCCceEE
Q 017143 152 SGSIGQVKM 160 (376)
Q Consensus 152 ~g~iG~i~~ 160 (376)
.+.|-++..
T Consensus 149 ~~~I~~i~v 157 (370)
T 3pzr_A 149 RGLVEWMSA 157 (370)
T ss_dssp TTCEEEEEE
T ss_pred hCCCcEEEE
Confidence 766655433
No 280
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=96.47 E-value=0.0053 Score=55.91 Aligned_cols=64 Identities=20% Similarity=0.351 Sum_probs=49.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+.....++.. +.+|+ ++|++++. . .+.++ .+.++++++++ .|+|++++|..
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~---G~~V~-~~d~~~~~-----~--~~~~~---~~~~l~ell~~--aDvV~l~~Plt 211 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM---GAKVI-AYDVAYNP-----E--FEPFL---TYTDFDTVLKE--ADIVSLHTPLF 211 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCG-----G--GTTTC---EECCHHHHHHH--CSEEEECCCCC
T ss_pred CCeEEEEecCHHHHHHHHHHhhC---CCEEE-EECCChhh-----h--hhccc---cccCHHHHHhc--CCEEEEcCCCC
Confidence 35899999999999998888876 88877 57887752 1 11122 34589999987 89999999954
No 281
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.46 E-value=0.0044 Score=57.09 Aligned_cols=63 Identities=27% Similarity=0.422 Sum_probs=48.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|||||+|.||+.....++.. +.+|++ +|+..+ .. ..+ ..+.++++++++ .|+|++++|..
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~---G~~V~~-~d~~~~---~~-----~~~---~~~~sl~ell~~--aDiV~l~~Plt 181 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEAL---GIRTLL-CDPPRA---AR-----GDE---GDFRTLDELVQE--ADVLTFHTPLY 181 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT---TCEEEE-ECHHHH---HT-----TCC---SCBCCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEeECHHHHHHHHHHHHC---CCEEEE-ECCChH---Hh-----ccC---cccCCHHHHHhh--CCEEEEcCcCC
Confidence 36899999999999998888876 888775 675332 11 112 357899999987 89999999954
No 282
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.46 E-value=0.0059 Score=56.61 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=49.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC-C---ccCCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL-K---VFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~~~~D~V~i~ 81 (376)
.-+|+|||+|.+|...+..++.. +.+|+ ++|++++++ +.+.+.+|... . .+.++++++.. .|+|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~---Ga~V~-~~d~~~~~l---~~~~~~~g~~~~~~~~~~~~l~~~l~~--aDvVi~~ 238 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM---GATVT-VLDINIDKL---RQLDAEFCGRIHTRYSSAYELEGAVKR--ADLVIGA 238 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESCHHHH---HHHHHHTTTSSEEEECCHHHHHHHHHH--CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEE-EEeCCHHHH---HHHHHhcCCeeEeccCCHHHHHHHHcC--CCEEEEC
Confidence 46899999999999988888776 66755 689988743 34444455431 0 13456677765 8999998
Q ss_pred CCCC
Q 017143 82 TPNM 85 (376)
Q Consensus 82 t~~~ 85 (376)
++..
T Consensus 239 ~~~p 242 (377)
T 2vhw_A 239 VLVP 242 (377)
T ss_dssp CCCT
T ss_pred CCcC
Confidence 8643
No 283
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=96.45 E-value=0.019 Score=51.82 Aligned_cols=102 Identities=22% Similarity=0.281 Sum_probs=66.9
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC-----CC----------------CC
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD-----WP----------------LK 61 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-----~~----------------~~ 61 (376)
...++||||.|.|+||+..++++... + +++++|.|+..+. +...-+- +|+ ++ +.
T Consensus 4 ~~~~~kvgInGFGRIGrlv~R~~~~~--~-veivainDp~~d~-~~~a~l~-~yDS~hG~f~~~v~~~~~~l~i~Gk~I~ 78 (346)
T 3h9e_O 4 VARELTVGINGFGRIGRLVLRACMEK--G-VKVVAVNDPFIDP-EYMVYMF-KYDSTHGRYKGSVEFRNGQLVVDNHEIS 78 (346)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHT--T-CEEEEEECTTCCH-HHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEE
T ss_pred cCCeeEEEEECCChHHHHHHHHHHhC--C-CEEEEEeCCCCCh-hHhcccc-cccCCCCCCCCcEEEcCCEEEECCEEEE
Confidence 34579999999999999888877665 3 9999999963221 1222222 221 00 11
Q ss_pred cc--CCHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 62 VF--PGHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 62 ~~--~~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
++ .+.+++-. +..+|+|+-||.-....+.+..++++| -|-|++.-|.+
T Consensus 79 v~~e~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aG-AkkVVIsaps~ 129 (346)
T 3h9e_O 79 VYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAG-AQRVVISAPSP 129 (346)
T ss_dssp EECCSSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTT-CSEEEESSCCS
T ss_pred EEecCChhhCCcccccccEEEEeccccCCHHHHHHHHHcC-CCEEEECCCCC
Confidence 11 12232221 126999999999999999999999955 26688888854
No 284
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.45 E-value=0.0031 Score=56.73 Aligned_cols=75 Identities=20% Similarity=0.208 Sum_probs=46.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--------cCCHHHHhhCCCCCE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--------FPGHQELLDSGLCDV 77 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~D~ 77 (376)
++||+|||+|.+|......|. . +.+|+ ++++++++ ++++.+ .|+.+.. +...++.. ...|+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~---g~~V~-~~~r~~~~---~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~--~~~D~ 70 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L---YHDVT-VVTRRQEQ---AAAIQS-EGIRLYKGGEEFRADCSADTSIN--SDFDL 70 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T---TSEEE-EECSCHHH---HHHHHH-HCEEEEETTEEEEECCEEESSCC--SCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHh-c---CCceE-EEECCHHH---HHHHHh-CCceEecCCCeeccccccccccc--CCCCE
Confidence 479999999999998877777 4 46765 67888763 444433 2432110 00001222 34899
Q ss_pred EEEeCCCCccHHHH
Q 017143 78 VVVSTPNMTHYQIL 91 (376)
Q Consensus 78 V~i~t~~~~h~~~~ 91 (376)
|++++++..-.+.+
T Consensus 71 vilavK~~~~~~~l 84 (307)
T 3ego_A 71 LVVTVKQHQLQSVF 84 (307)
T ss_dssp EEECCCGGGHHHHH
T ss_pred EEEEeCHHHHHHHH
Confidence 99999987654444
No 285
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.44 E-value=0.0094 Score=53.12 Aligned_cols=73 Identities=21% Similarity=0.255 Sum_probs=48.1
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHH---hcCCC--CCccCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLAN---AFDWP--LKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~---~~~~~--~~~~~~~~~~l~~~~~D~V~i 80 (376)
|||+|||+|.+|...+..+... +.+.-+.++|+++++++ .+.++.. .++.+ +..+++ .+.+++ .|+|++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~--aDiVVi 75 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG--SEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT--CSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC--CCEEEE
Confidence 5899999999999888777776 34433558999998543 1222221 23333 233456 566665 899999
Q ss_pred eCCC
Q 017143 81 STPN 84 (376)
Q Consensus 81 ~t~~ 84 (376)
+.+.
T Consensus 76 aag~ 79 (294)
T 1oju_A 76 TAGL 79 (294)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9764
No 286
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.42 E-value=0.002 Score=57.11 Aligned_cols=119 Identities=15% Similarity=0.159 Sum_probs=76.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
.-++.|+|+|..|+..+..|... +++-+.|++|+.+ ++++++++++. ..|+++++ + +.|+||-+||-.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~---G~~~v~v~nRt~~---ka~~La~~~~~--~~~~~l~~-l---~~DivInaTp~G 189 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN---FAKDIYVVTRNPE---KTSEIYGEFKV--ISYDELSN-L---KGDVIINCTPKG 189 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT---TCSEEEEEESCHH---HHHHHCTTSEE--EEHHHHTT-C---CCSEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHc---CCCEEEEEeCCHH---HHHHHHHhcCc--ccHHHHHh-c---cCCEEEECCccC
Confidence 35899999999999988888876 6744558899887 67788776541 23333333 2 589999999975
Q ss_pred ccH-----HHHHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHH
Q 017143 86 THY-----QILMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKL 146 (376)
Q Consensus 86 ~h~-----~~~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~ 146 (376)
.+. .+-...++ .+ .+.++ +|. +. .|.+.|+++ |..+.-|....-..+....
T Consensus 190 m~~~~~~~pi~~~~l~--~~-~~v~DlvY~P~-----~T-~ll~~A~~~-G~~~~~Gl~MLv~Qa~~~f 248 (282)
T 3fbt_A 190 MYPKEGESPVDKEVVA--KF-SSAVDLIYNPV-----ET-LFLKYARES-GVKAVNGLYMLVSQAAASE 248 (282)
T ss_dssp STTSTTCCSSCHHHHT--TC-SEEEESCCSSS-----SC-HHHHHHHHT-TCEEECSHHHHHHHHHHHH
T ss_pred ccCCCccCCCCHHHcC--CC-CEEEEEeeCCC-----CC-HHHHHHHHC-cCeEeCcHHHHHHHHHHHH
Confidence 542 23445566 44 45455 443 22 256666455 7787777665554443333
No 287
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.40 E-value=0.015 Score=52.51 Aligned_cols=74 Identities=16% Similarity=0.266 Sum_probs=45.2
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCc--EEEEEeCCChhhHH-HHHHHHHhc----CCCCCccCCHHHHhhCCCCCE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGV--SVVCIADPHLQSRQ-QALKLANAF----DWPLKVFPGHQELLDSGLCDV 77 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~--~~~~v~d~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~l~~~~~D~ 77 (376)
+++||+|||+|.+|......+... +. +|+ ++|+++++.+ .+.++.... ...+...++++ .+. +.|+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~---g~~~~V~-l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~aD~ 78 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR---GIAREIV-LEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE-ICR--DADM 78 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT---TCCSEEE-EECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG-GGT--TCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCCCEEE-EEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHH-HhC--CCCE
Confidence 458999999999999888777664 44 654 7899876443 122222211 11111223553 444 4899
Q ss_pred EEEeCCCC
Q 017143 78 VVVSTPNM 85 (376)
Q Consensus 78 V~i~t~~~ 85 (376)
|++++...
T Consensus 79 Vii~v~~~ 86 (319)
T 1lld_A 79 VVITAGPR 86 (319)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99999644
No 288
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.37 E-value=0.0011 Score=60.85 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=83.2
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHH-HHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQ-ELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~D~V~i~t~ 83 (376)
++||+||| +|..|...++.|.+..-|.++++.+.+++.. .+.+. ..+.+ ..+.+.+ +.++ ++|+|+.|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa----G~~~~-~~~~~-~~~~~~~~~~~~--~~Dvvf~a~~ 73 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA----GKSLK-FKDQD-ITIEETTETAFE--GVDIALFSAG 73 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT----TCEEE-ETTEE-EEEEECCTTTTT--TCSEEEECSC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC----CCcce-ecCCC-ceEeeCCHHHhc--CCCEEEECCC
Confidence 58999999 6999999988777642267888888765432 11111 00111 1111111 1233 5999999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCC--------CHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCT--------TVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~--------~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
.....+.+.++++ +|.-|+- -+.+. =+.|.. ...-+. ...+..+-++.-......++-+.+.+.|
T Consensus 74 ~~~s~~~a~~~~~--~G~~vID-lSa~~R~~~~~p~~vpevN---~~~i~~-~~~iIanpgC~tt~~~l~l~pL~~~~~i 146 (366)
T 3pwk_A 74 SSTSAKYAPYAVK--AGVVVVD-NTSYFRQNPDVPLVVPEVN---AHALDA-HNGIIACPNCSTIQMMVALEPVRQKWGL 146 (366)
T ss_dssp HHHHHHHHHHHHH--TTCEEEE-CSSTTTTCTTSCBCCHHHH---GGGGTT-CCSEEECCCHHHHHHHHHHHHHHHHHCC
T ss_pred hHhHHHHHHHHHH--CCCEEEE-cCCccccCCCceEEEccCC---HHHHcC-CCCeEECCCcHHHHHHHHHHHHHHhCCC
Confidence 9999999999999 7765443 22211 122222 211121 1234455555556666777778777667
Q ss_pred CceEEEEE
Q 017143 156 GQVKMVAI 163 (376)
Q Consensus 156 G~i~~~~~ 163 (376)
.++.....
T Consensus 147 ~~i~v~t~ 154 (366)
T 3pwk_A 147 DRIIVSTY 154 (366)
T ss_dssp SEEEEEEE
T ss_pred cEEEEEEE
Confidence 66544433
No 289
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.37 E-value=0.012 Score=56.28 Aligned_cols=67 Identities=21% Similarity=0.193 Sum_probs=50.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.+|+|||+|.+|...+..++.. +.+|+ ++|+++.+.+ .+.+.|+. +.++++++.. .|+|+.++++.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~---Ga~Vi-v~d~~~~~~~----~A~~~Ga~---~~~l~e~l~~--aDvVi~atgt~ 340 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ---GARVS-VTEIDPINAL----QAMMEGFD---VVTVEEAIGD--ADIVVTATGNK 340 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHHHH----HHHHTTCE---ECCHHHHGGG--CSEEEECSSSS
T ss_pred cCEEEEEccCHHHHHHHHHHHHC---CCEEE-EEeCCHHHHH----HHHHcCCE---EecHHHHHhC--CCEEEECCCCH
Confidence 36899999999999988888776 67755 6899887433 23456753 3568888865 89999998643
No 290
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=96.37 E-value=0.0022 Score=58.05 Aligned_cols=66 Identities=17% Similarity=0.254 Sum_probs=49.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
-.+|||||+|.||+.....++.. +.+|++ +|++++.. +. +. ...+.++++++++ .|+|++++|.
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~---G~~V~~-~dr~~~~~---~~------~~~~~~~~~l~ell~~--aDvV~l~lPl 201 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL---GMHVIG-VNTTGHPA---DH------FHETVAFTATADALAT--ANFIVNALPL 201 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEE-EESSCCCC---TT------CSEEEEGGGCHHHHHH--CSEEEECCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC---CCEEEE-ECCCcchh---Hh------HhhccccCCHHHHHhh--CCEEEEcCCC
Confidence 36899999999999998888876 889875 67776521 11 11 1234688999987 8999999996
Q ss_pred Cc
Q 017143 85 MT 86 (376)
Q Consensus 85 ~~ 86 (376)
..
T Consensus 202 t~ 203 (324)
T 3evt_A 202 TP 203 (324)
T ss_dssp CG
T ss_pred ch
Confidence 43
No 291
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.35 E-value=0.0045 Score=54.56 Aligned_cols=74 Identities=24% Similarity=0.316 Sum_probs=52.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC-CCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW-PLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
.-++.|+|+|.+|+..+..|.+. ++.-+.|++|+.+ ++++++++++- .+.. .+++++-. .+.|+|+-+||.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~---G~~~v~i~~R~~~---~a~~la~~~~~~~~~~-~~~~~l~~-~~~DivInaTp~ 191 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA---GPSELVIANRDMA---KALALRNELDHSRLRI-SRYEALEG-QSFDIVVNATSA 191 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT---CCSEEEEECSCHH---HHHHHHHHHCCTTEEE-ECSGGGTT-CCCSEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHc---CCCEEEEEeCCHH---HHHHHHHHhccCCeeE-eeHHHhcc-cCCCEEEECCCC
Confidence 35899999999999988888875 6644568899987 67777777652 1111 23444432 459999999997
Q ss_pred Ccc
Q 017143 85 MTH 87 (376)
Q Consensus 85 ~~h 87 (376)
..+
T Consensus 192 gm~ 194 (272)
T 3pwz_A 192 SLT 194 (272)
T ss_dssp GGG
T ss_pred CCC
Confidence 654
No 292
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.35 E-value=0.016 Score=52.93 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=61.1
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCcc--CCH-HHHhh---CCCCCEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVF--PGH-QELLD---SGLCDVVV 79 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~l~---~~~~D~V~ 79 (376)
=+|.|+|+|.+|...+..++.. .+.+++++ +++++++ ++++++|.+ +-.| .++ +++.+ ...+|.++
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~--~g~~Vi~~-~~~~~r~----~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~ 237 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNV--FGAKVIAV-DINQDKL----NLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAI 237 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--SCCEEEEE-ESCHHHH----HHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEE
T ss_pred CEEEEEcCCCccHHHHHHHHHh--CCCEEEEE-ECcHHHh----hhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEE
Confidence 4799999999998888777776 67888865 5666643 345556654 1112 233 33332 23578999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
.++........+..+++.+ |+-+++-
T Consensus 238 ~~~~~~~~~~~~~~~l~~~-G~~v~~g 263 (348)
T 4eez_A 238 VCAVARIAFEQAVASLKPM-GKMVAVA 263 (348)
T ss_dssp ECCSCHHHHHHHHHTEEEE-EEEEECC
T ss_pred EeccCcchhheeheeecCC-ceEEEEe
Confidence 9998888788888888743 6655553
No 293
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.35 E-value=0.0065 Score=56.06 Aligned_cols=64 Identities=31% Similarity=0.458 Sum_probs=49.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.+|+.....++.. +.+++ ++|++++ .. ..+. .+.++++++++ .|+|++++|..
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~-~~d~~~~---~~-----~~g~---~~~~l~ell~~--aDvV~l~~Plt 178 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGL---GWKVL-VCDPPRQ---AR-----EPDG---EFVSLERLLAE--ADVISLHTPLN 178 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECHHHH---HH-----STTS---CCCCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC---CCEEE-EEcCChh---hh-----ccCc---ccCCHHHHHHh--CCEEEEeccCc
Confidence 46899999999999998888876 78876 4776443 11 2232 46789999987 89999999975
Q ss_pred c
Q 017143 86 T 86 (376)
Q Consensus 86 ~ 86 (376)
.
T Consensus 179 ~ 179 (380)
T 2o4c_A 179 R 179 (380)
T ss_dssp S
T ss_pred c
Confidence 4
No 294
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=96.33 E-value=0.011 Score=53.12 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=53.7
Q ss_pred CCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH--------HHHHHHHHhcCCCCC---ccCC--HHHH
Q 017143 3 ANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR--------QQALKLANAFDWPLK---VFPG--HQEL 69 (376)
Q Consensus 3 ~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~--------~~~~~~~~~~~~~~~---~~~~--~~~~ 69 (376)
||+++||.++|+..++...+..|.+. +.++++|+..-+.+. ...+++|+++|+|+. .+.+ +.+.
T Consensus 4 m~~~mrivf~Gt~~fa~~~L~~L~~~---~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~ 80 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDFAARHLAALLSS---EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESKQQ 80 (318)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTS---SSEEEEEECCCC---------CCCHHHHHHHHTTCCEECCSCSCSHHHHHH
T ss_pred cccCCEEEEEecCHHHHHHHHHHHHC---CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCCEEccCcCCCHHHHHH
Confidence 35679999999998888777777664 789999997522211 134688999999821 1222 3456
Q ss_pred hhCCCCCEEEEeCCCC
Q 017143 70 LDSGLCDVVVVSTPNM 85 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~ 85 (376)
|+..++|+++++.-..
T Consensus 81 l~~~~~Dliv~~~y~~ 96 (318)
T 3q0i_A 81 LAALNADLMVVVAYGL 96 (318)
T ss_dssp HHTTCCSEEEESSCCS
T ss_pred HHhcCCCEEEEeCccc
Confidence 6677899999887643
No 295
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=96.33 E-value=0.0091 Score=53.73 Aligned_cols=74 Identities=15% Similarity=0.140 Sum_probs=48.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHH-HHHHh---cCCC--CCccCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQAL-KLANA---FDWP--LKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~-~~~~~---~~~~--~~~~~~~~~~l~~~~~D~V~i 80 (376)
+||+|||+|.+|......++.. +.+.+|+ ++|+++++.+... .+... +..+ +..++++++ +++ .|+|++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~-~~g~~V~-l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~--aDvVii 75 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK-QLARELV-LLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TAN--SDIVII 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEE-EECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTT--CSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEE-EEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCC--CCEEEE
Confidence 4899999999999877777664 1255655 7899987544221 12111 1222 234578877 655 899999
Q ss_pred eCCCC
Q 017143 81 STPNM 85 (376)
Q Consensus 81 ~t~~~ 85 (376)
++|..
T Consensus 76 av~~p 80 (310)
T 1guz_A 76 TAGLP 80 (310)
T ss_dssp CCSCC
T ss_pred eCCCC
Confidence 99753
No 296
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.31 E-value=0.021 Score=52.04 Aligned_cols=134 Identities=16% Similarity=0.175 Sum_probs=80.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhh----CCCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLD----SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~----~~~~D~V 78 (376)
-+|.|+|+|.+|...+..++.. +...+.++++++++++ +++++|.+ .++ .+..+... ...+|+|
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~---G~~~vi~~~~~~~k~~----~a~~lGa~-~~i~~~~~~~~~~~~~~~~~~g~d~v 233 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVAL---GAKSVTAIDISSEKLA----LAKSFGAM-QTFNSSEMSAPQMQSVLRELRFNQLI 233 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCSEEEEEESCHHHHH----HHHHTTCS-EEEETTTSCHHHHHHHHGGGCSSEEE
T ss_pred CEEEEECCCCcchHHHHHHHHc---CCcEEEEEechHHHHH----HHHHcCCe-EEEeCCCCCHHHHHHhhcccCCcccc
Confidence 4789999999998877766665 6666667788887443 45566755 222 23333332 2457999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCC---CCCHHHHHHHHHHHHhCCCeEEEEeecccc-----CHHHHHHHHHH
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPL---CTTVADCKKVVDAARKRPDILVQVGLEYRY-----MPPVAKLIQIV 150 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~---a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~-----~p~~~~~k~~i 150 (376)
+.++......+.+.++++.+ |+-+++--+. .........+ . .+ ++.+. |....+ ...+..+.+++
T Consensus 234 ~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~---~-~k-~~~i~-G~~~~~~~~~~~~~~~~~~~l~ 306 (346)
T 4a2c_A 234 LETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKI---L-RK-ELTVI-GSWMNYSSPWPGQEWETASRLL 306 (346)
T ss_dssp EECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHH---H-HH-TCEEE-ECCTTCCSSTTCHHHHHHHHHH
T ss_pred cccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHH---h-hc-eeEEE-EEeccccCcchHHHHHHHHHHH
Confidence 99998888888899999832 4444443222 2233333332 3 22 33332 222221 24577788888
Q ss_pred HcCCC
Q 017143 151 KSGSI 155 (376)
Q Consensus 151 ~~g~i 155 (376)
++|++
T Consensus 307 ~~g~l 311 (346)
T 4a2c_A 307 TERKL 311 (346)
T ss_dssp HTTCS
T ss_pred HcCCC
Confidence 88876
No 297
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.31 E-value=0.01 Score=53.86 Aligned_cols=93 Identities=16% Similarity=0.071 Sum_probs=58.8
Q ss_pred CceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 5 DTVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
.+.||.|||.|.+|.. ....+.+ .+.+|. ++|..+... ..+++. +.|+++..-.+.+++.+ .++|+|+++.-
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~---~G~~V~-~~D~~~~~~-~~~~L~-~~gi~v~~g~~~~~l~~-~~~d~vV~Spg 75 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKE---AGFEVS-GCDAKMYPP-MSTQLE-ALGIDVYEGFDAAQLDE-FKADVYVIGNV 75 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHH---TTCEEE-EEESSCCTT-HHHHHH-HTTCEEEESCCGGGGGS-CCCSEEEECTT
T ss_pred CCcEEEEEEECHHHHHHHHHHHHh---CCCEEE-EEcCCCCcH-HHHHHH-hCCCEEECCCCHHHcCC-CCCCEEEECCC
Confidence 3568999999999986 4444445 488876 578764311 223333 45776211134444431 23898888765
Q ss_pred CCccHHHHHHHHcCCCCCeEEEe
Q 017143 84 NMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
-....+.+.+|.+ +|++|+-|
T Consensus 76 i~~~~p~~~~a~~--~gi~v~~~ 96 (326)
T 3eag_A 76 AKRGMDVVEAILN--LGLPYISG 96 (326)
T ss_dssp CCTTCHHHHHHHH--TTCCEEEH
T ss_pred cCCCCHHHHHHHH--cCCcEEeH
Confidence 5555566778889 89999987
No 298
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=96.31 E-value=0.019 Score=48.45 Aligned_cols=88 Identities=13% Similarity=0.020 Sum_probs=53.8
Q ss_pred CCceeEEEE--eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC-----C-------HHHH
Q 017143 4 NDTVKYGII--GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP-----G-------HQEL 69 (376)
Q Consensus 4 ~~~~~v~ii--G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~ 69 (376)
++++||+|. |.|......+.++... -.+++++|++..+. ...+.|+++|+|+...+ + +.+.
T Consensus 10 ~~~~ri~vl~SG~gsnl~all~~~~~~--~~~eI~~Vis~~~a---~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 84 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLLDAAVGD--YPARVVAVGVDREC---RAAEIAAEASVPVFTVRLADHPSRDAWDVAITAA 84 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHHHHSSTT--CSEEEEEEEESSCC---HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCChHHHHHHHHHHhcc--CCCeEEEEEeCCch---HHHHHHHHcCCCEEEeCcccccchhhhhHHHHHH
Confidence 457899999 6665545555544331 35788888765443 56778999999832221 1 2345
Q ss_pred hhCCCCCEEEEeCCCCccHHHHHHHHc
Q 017143 70 LDSGLCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
|+..++|+++++.-...=.+-++...+
T Consensus 85 l~~~~~Dlivlagy~~iL~~~~l~~~~ 111 (215)
T 3da8_A 85 TAAHEPDLVVSAGFMRILGPQFLSRFY 111 (215)
T ss_dssp HHTTCCSEEEEEECCSCCCHHHHHHHT
T ss_pred HHhhCCCEEEEcCchhhCCHHHHhhcc
Confidence 566779999988765433333333333
No 299
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.28 E-value=0.0022 Score=57.85 Aligned_cols=65 Identities=20% Similarity=0.278 Sum_probs=48.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
-.+|||||+|.||+.....++.. +.+|++ +|++++.. . ++. .....++++++++ .|+|++++|.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~---G~~V~~-~dr~~~~~---~------~~~~~~~~~~l~ell~~--aDiV~l~~Pl 203 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW---GFPLRC-WSRSRKSW---P------GVESYVGREELRAFLNQ--TRVLINLLPN 203 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT---TCCEEE-EESSCCCC---T------TCEEEESHHHHHHHHHT--CSEEEECCCC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEE-EcCCchhh---h------hhhhhcccCCHHHHHhh--CCEEEEecCC
Confidence 46899999999999998888776 788775 67766521 1 221 0112678999987 8999999995
Q ss_pred C
Q 017143 85 M 85 (376)
Q Consensus 85 ~ 85 (376)
.
T Consensus 204 t 204 (315)
T 3pp8_A 204 T 204 (315)
T ss_dssp C
T ss_pred c
Confidence 4
No 300
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=96.24 E-value=0.013 Score=50.02 Aligned_cols=89 Identities=13% Similarity=0.091 Sum_probs=56.0
Q ss_pred CceeEEEE--eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHHh
Q 017143 5 DTVKYGII--GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQELL 70 (376)
Q Consensus 5 ~~~~v~ii--G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~l 70 (376)
+|+||+|+ |.|......+.++.+.. .+.++++|+...++. ...++|+++|+|+.. |.+ +.+.|
T Consensus 21 ~~~rI~~l~SG~g~~~~~~l~~l~~~~-~~~~I~~Vvt~~~~~--~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l 97 (229)
T 3auf_A 21 HMIRIGVLISGSGTNLQAILDGCREGR-IPGRVAVVISDRADA--YGLERARRAGVDALHMDPAAYPSRTAFDAALAERL 97 (229)
T ss_dssp TCEEEEEEESSCCHHHHHHHHHHHTTS-SSEEEEEEEESSTTC--HHHHHHHHTTCEEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHhCC-CCCeEEEEEcCCCch--HHHHHHHHcCCCEEEECcccccchhhccHHHHHHH
Confidence 46899999 77777666666665531 257898888654433 467788999998321 222 22445
Q ss_pred hCCCCCEEEEeCCCCccHHHHHHHHc
Q 017143 71 DSGLCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
+..++|+++++.....=.+-++.+.+
T Consensus 98 ~~~~~Dliv~agy~~IL~~~~l~~~~ 123 (229)
T 3auf_A 98 QAYGVDLVCLAGYMRLVRGPMLTAFP 123 (229)
T ss_dssp HHTTCSEEEESSCCSCCCHHHHHHST
T ss_pred HhcCCCEEEEcChhHhCCHHHHhhcc
Confidence 55679999998865443333444433
No 301
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.22 E-value=0.0055 Score=57.23 Aligned_cols=64 Identities=28% Similarity=0.332 Sum_probs=49.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
-.++||||+|.||+.....+... +.+|+ ++|+++.. ..+. +..+.+++++++. .|+|++++|..
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~---G~~V~-~~d~~~~~---------~~~~-~~~~~~l~ell~~--aDvV~l~~P~t 208 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESL---GMYVY-FYDIENKL---------PLGN-ATQVQHLSDLLNM--SDVVSLHVPEN 208 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCC---------CCTT-CEECSCHHHHHHH--CSEEEECCCSS
T ss_pred CCEEEEEeECHHHHHHHHHHHHC---CCEEE-EEcCCchh---------ccCC-ceecCCHHHHHhc--CCEEEEccCCC
Confidence 35899999999999988888876 78876 57886642 1121 2356789999987 89999999965
No 302
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=96.21 E-value=0.019 Score=57.81 Aligned_cols=102 Identities=15% Similarity=0.219 Sum_probs=61.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHH--------HHHhcCC-C----------CCccCCH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALK--------LANAFDW-P----------LKVFPGH 66 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~--------~~~~~~~-~----------~~~~~~~ 66 (376)
..||+|||+|.||......++.. +++|+ ++|++++.++++.+ +.+ .|. + +...+|+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a---G~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~-~G~~~~~~~~~~~~~i~~~~d~ 388 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK---GTPIL-MKDINEHGIEQGLAEAAKLLVGRVD-KGRMTPAKMAEVLNGIRPTLSY 388 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT---TCCEE-EECSSHHHHHHHHHHHHHHHHHHHT-TTSSCHHHHHHHHHHEEEESSS
T ss_pred CCEEEEECCChhhHHHHHHHHhC---CCEEE-EEECCHHHHHHHHHHHHHHHHHHHh-cCCCCHHHHHHHhcCeEEECCH
Confidence 45899999999999888888775 77766 78999986654322 111 121 0 1234566
Q ss_pred HHHhhCCCCCEEEEeCCCCccH--HHHHHHHcCCCCCeEEEecCCCCCHHH
Q 017143 67 QELLDSGLCDVVVVSTPNMTHY--QILMDIINHPKPHHVLVEKPLCTTVAD 115 (376)
Q Consensus 67 ~~~l~~~~~D~V~i~t~~~~h~--~~~~~al~~~~g~~Vl~EKP~a~~~~e 115 (376)
+.+++ .|+|+.+.|..... .+..+..+......|++----+.++.+
T Consensus 389 -~~~~~--aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~ 436 (715)
T 1wdk_A 389 -GDFGN--VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISL 436 (715)
T ss_dssp -TTGGG--CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHH
T ss_pred -HHHCC--CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHH
Confidence 45555 89999999988643 333332221122345553333455543
No 303
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.20 E-value=0.027 Score=44.74 Aligned_cols=92 Identities=9% Similarity=0.109 Sum_probs=53.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCC-hhhHHHHHHHHHh--cCCCCCcc---CCHHHHhh--CCCCCE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPH-LQSRQQALKLANA--FDWPLKVF---PGHQELLD--SGLCDV 77 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~-~~~~~~~~~~~~~--~~~~~~~~---~~~~~~l~--~~~~D~ 77 (376)
+-+|.|+|+|.+|...+..|... +.+++. +|++ ++ +++.+.+. .|+. ..+ ++.+.+-+ -.+.|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~---g~~V~v-id~~~~~---~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR---GQNVTV-ISNLPED---DIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT---TCCEEE-EECCCHH---HHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCCEEE-EECCChH---HHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChhhCCE
Confidence 56899999999999988888775 678775 5665 34 33333322 2443 112 23332221 235899
Q ss_pred EEEeCCCCccHHHHHHHH-cCCCCCeEEE
Q 017143 78 VVVSTPNMTHYQILMDII-NHPKPHHVLV 105 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al-~~~~g~~Vl~ 105 (376)
|+++++++..-..+...+ +.....+|++
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 75 ILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp EEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred EEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 999999864433333333 2102345665
No 304
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.19 E-value=0.016 Score=50.45 Aligned_cols=93 Identities=22% Similarity=0.275 Sum_probs=55.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh-------------------hhHHHHHHHHHhcC--CCCCcc-
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL-------------------QSRQQALKLANAFD--WPLKVF- 63 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~-------------------~~~~~~~~~~~~~~--~~~~~~- 63 (376)
..||.|||+|..|...+..|... ++.-+.++|.|. .+.+.+.+..++.+ +.+..+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~---Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA---GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT---TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc---CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 46999999999999988888886 776677888764 22222222222222 111111
Q ss_pred -----CCHHHHhhCCCCCEEEEeCCCC-ccHHHHHHHHcCCCCCeEEE
Q 017143 64 -----PGHQELLDSGLCDVVVVSTPNM-THYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 64 -----~~~~~~l~~~~~D~V~i~t~~~-~h~~~~~~al~~~~g~~Vl~ 105 (376)
++.++++.. .|+|+.++.+. ....+...|.+ .+++++.
T Consensus 105 ~~~~~~~~~~~~~~--~DvVi~~~d~~~~r~~l~~~~~~--~~~p~i~ 148 (251)
T 1zud_1 105 QRLTGEALKDAVAR--ADVVLDCTDNMATRQEINAACVA--LNTPLIT 148 (251)
T ss_dssp SCCCHHHHHHHHHH--CSEEEECCSSHHHHHHHHHHHHH--TTCCEEE
T ss_pred ccCCHHHHHHHHhc--CCEEEECCCCHHHHHHHHHHHHH--hCCCEEE
Confidence 134556654 78888888753 33344444556 5666554
No 305
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.19 E-value=0.0055 Score=57.18 Aligned_cols=64 Identities=27% Similarity=0.313 Sum_probs=48.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
.++||||+|.||+.....+... +.+|+ ++|+++.. . ..+ ...+.+++++++. .|+|++++|...
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~---G~~V~-~yd~~~~~---~-----~~~--~~~~~sl~ell~~--aDvV~lhvPlt~ 220 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL---GMTVR-YYDTSDKL---Q-----YGN--VKPAASLDELLKT--SDVVSLHVPSSK 220 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECTTCCC---C-----BTT--BEECSSHHHHHHH--CSEEEECCCC--
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEE-EECCcchh---c-----ccC--cEecCCHHHHHhh--CCEEEEeCCCCH
Confidence 5899999999999988888776 78877 57876531 0 112 2356899999987 899999999643
No 306
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.18 E-value=0.016 Score=52.28 Aligned_cols=74 Identities=22% Similarity=0.296 Sum_probs=45.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc--EEEEEeCCChhhHHHHH-HHHHh--cCCCCCc-cCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV--SVVCIADPHLQSRQQAL-KLANA--FDWPLKV-FPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~--~~~~v~d~~~~~~~~~~-~~~~~--~~~~~~~-~~~~~~~l~~~~~D~V~i 80 (376)
+||+|||+|.+|...+..+... +. +| .++|+++++++... .+... +..+.+. .++++ .++ +.|+|++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~---g~~~~V-~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~-~~~--~aDvVii 73 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK---GFAREM-VLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA-DLK--GSDVVIV 73 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCSEE-EEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG-GGT--TCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCCeE-EEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCHH-HhC--CCCEEEE
Confidence 4899999999999888877765 33 54 47899987544321 11111 1111111 24543 444 4899999
Q ss_pred eCCCCcc
Q 017143 81 STPNMTH 87 (376)
Q Consensus 81 ~t~~~~h 87 (376)
+++...+
T Consensus 74 av~~~~~ 80 (319)
T 1a5z_A 74 AAGVPQK 80 (319)
T ss_dssp CCCCCCC
T ss_pred ccCCCCC
Confidence 9997553
No 307
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.18 E-value=0.018 Score=52.68 Aligned_cols=132 Identities=14% Similarity=0.159 Sum_probs=82.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
-+|.|+|+|.+|...+..++.. +.+++++ ++++++++ +++++|.+ .++.+.++ +.. .+|+|+-++....
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~-~~~~~~~~----~~~~lGa~-~v~~~~~~-~~~-~~D~vid~~g~~~ 246 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM---GAEVSVF-ARNEHKKQ----DALSMGVK-HFYTDPKQ-CKE-ELDFIISTIPTHY 246 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT---TCEEEEE-CSSSTTHH----HHHHTTCS-EEESSGGG-CCS-CEEEEEECCCSCC
T ss_pred CEEEEECCcHHHHHHHHHHHHC---CCeEEEE-eCCHHHHH----HHHhcCCC-eecCCHHH-Hhc-CCCEEEECCCcHH
Confidence 4799999999998877666654 6787764 66666543 44567765 44444333 333 6999999999887
Q ss_pred cHHHHHHHHcCCCCCeEEEecCC----C-CCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCce
Q 017143 87 HYQILMDIINHPKPHHVLVEKPL----C-TTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQV 158 (376)
Q Consensus 87 h~~~~~~al~~~~g~~Vl~EKP~----a-~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 158 (376)
..+.+.++++.+ |+-|++-.|. . .+. .... -..++.+. +........+..+.+++++|.|-.+
T Consensus 247 ~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~------~~~~-~~~~~~i~-g~~~~~~~~~~~~~~l~~~g~l~~~ 314 (348)
T 3two_A 247 DLKDYLKLLTYN-GDLALVGLPPVEVAPVLSV------FDFI-HLGNRKVY-GSLIGGIKETQEMVDFSIKHNIYPE 314 (348)
T ss_dssp CHHHHHTTEEEE-EEEEECCCCCGGGCCEEEH------HHHH-HTCSCEEE-ECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhcC-CEEEEECCCCCCCcccCCH------HHHH-hhCCeEEE-EEecCCHHHHHHHHHHHHhCCCCce
Confidence 888888988753 6666664332 2 221 1122 12244443 3333333557778888888877543
No 308
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.17 E-value=0.0032 Score=55.89 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=50.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc--CC--CC-CccCCHHHHhhCCCCCEEEEe
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF--DW--PL-KVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~--~~--~~-~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+||+|||+|.+|......|.+. +.+|+ ++++++++. +++.... +. +. ...++. +.++. .|+|+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~---g~~V~-~~~r~~~~~---~~l~~~~~~~~~~~~~~~~~~~-~~~~~--~d~vi~~ 70 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ---GHEVQ-GWLRVPQPY---CSVNLVETDGSIFNESLTANDP-DFLAT--SDLLLVT 70 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCSE---EEEEEECTTSCEEEEEEEESCH-HHHHT--CSEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhC---CCCEE-EEEcCccce---eeEEEEcCCCceeeeeeeecCc-cccCC--CCEEEEE
Confidence 4899999999999888888775 66765 578887632 2222111 11 00 012443 45554 8999999
Q ss_pred CCCCccHHHHHHH
Q 017143 82 TPNMTHYQILMDI 94 (376)
Q Consensus 82 t~~~~h~~~~~~a 94 (376)
+|+....+.+.+.
T Consensus 71 v~~~~~~~v~~~l 83 (291)
T 1ks9_A 71 LKAWQVSDAVKSL 83 (291)
T ss_dssp SCGGGHHHHHHHH
T ss_pred ecHHhHHHHHHHH
Confidence 9998765555444
No 309
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.17 E-value=0.0083 Score=54.00 Aligned_cols=114 Identities=15% Similarity=0.152 Sum_probs=68.2
Q ss_pred CCCCCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHH--------HhcCCC-----------CC
Q 017143 1 MAANDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLA--------NAFDWP-----------LK 61 (376)
Q Consensus 1 m~~~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~--------~~~~~~-----------~~ 61 (376)
|++...-||+|||+|.||......++.. +++|+ ++|++++.++++.+.. ++..+. +.
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~---G~~V~-l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~ 76 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASG---GFRVK-LYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLIS 76 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHT---TCCEE-EECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEE
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhC---CCeEE-EEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcc
Confidence 6666567999999999999887777764 88866 7899998665443221 111111 12
Q ss_pred ccCCHHHHhhCCCCCEEEEeCCCCccHHH--HHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHH
Q 017143 62 VFPGHQELLDSGLCDVVVVSTPNMTHYQI--LMDIINHPKPHHVLVEKPLCTTVADCKKVVDAA 123 (376)
Q Consensus 62 ~~~~~~~~l~~~~~D~V~i~t~~~~h~~~--~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a 123 (376)
.++++++.+++ .|+|+=+.|...-... ..+.=+......|+.----++++.+ |.+..
T Consensus 77 ~~~~l~~a~~~--ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~---ia~~~ 135 (319)
T 3ado_A 77 SCTNLAEAVEG--VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSK---LFTGL 135 (319)
T ss_dssp EECCHHHHTTT--EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHH---HHTTC
T ss_pred cccchHhHhcc--CcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchh---hhhhc
Confidence 35678888876 8999988887654332 2222121123456666666677766 44444
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.17 E-value=0.017 Score=53.39 Aligned_cols=130 Identities=16% Similarity=0.140 Sum_probs=82.5
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhhC------CCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLDS------GLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~------~~~D 76 (376)
-+|.|+|+|.+|...+...+.. +...+.++++++++.+ +++++|.+ .++ .++.+.+.+ ..+|
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~----~a~~lGa~-~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLA---GATTVILSTRQATKRR----LAEEVGAT-ATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSCHHHHH----HHHHHTCS-EEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHH----HHHHcCCC-EEECCCCcCHHHHHHhhhhccCCCCC
Confidence 4799999999998877666654 7733445677776443 44556655 222 345444443 2589
Q ss_pred EEEEeCCCCccHHHHHHHHcCCCCCeEEEec-----CCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH
Q 017143 77 VVVVSTPNMTHYQILMDIINHPKPHHVLVEK-----PLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK 151 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EK-----P~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~ 151 (376)
+|+-++........+.++++.+ |+-|++-- ++..+. .... .+ ++.+.-.+. +...+..+.++++
T Consensus 256 vvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~------~~~~-~~-~~~i~g~~~--~~~~~~~~~~l~~ 324 (370)
T 4ej6_A 256 VVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEP------FDIL-FR-ELRVLGSFI--NPFVHRRAADLVA 324 (370)
T ss_dssp EEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCH------HHHH-HT-TCEEEECCS--CTTCHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCH------HHHH-hC-CcEEEEecc--ChHHHHHHHHHHH
Confidence 9999998777788888888843 66666532 333343 2233 33 444444333 3445888899999
Q ss_pred cCCC
Q 017143 152 SGSI 155 (376)
Q Consensus 152 ~g~i 155 (376)
+|++
T Consensus 325 ~g~i 328 (370)
T 4ej6_A 325 TGAI 328 (370)
T ss_dssp TTCS
T ss_pred cCCC
Confidence 9887
No 311
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.16 E-value=0.001 Score=58.85 Aligned_cols=121 Identities=12% Similarity=0.151 Sum_probs=71.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
.-++.|+|+|.+|+..+..|... +++-+.|++|+.+ +++++++++. ...+++.++++.+ .|+|+.+||..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~---G~~~v~v~~R~~~---~a~~la~~~~--~~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI---VRPTLTVANRTMS---RFNNWSLNIN--KINLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT---CCSCCEEECSCGG---GGTTCCSCCE--EECHHHHHHTGGG--CSEEEECCC--
T ss_pred CCEEEEECCcHHHHHHHHHHHHC---CCCEEEEEeCCHH---HHHHHHHhcc--cccHhhHHHHhcC--CCEEEECccCC
Confidence 35899999999999988888875 6633557899988 4555554322 1234455555555 89999999976
Q ss_pred ccHHH----HHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHH
Q 017143 86 THYQI----LMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKL 146 (376)
Q Consensus 86 ~h~~~----~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~ 146 (376)
.+... -...++ .+ .+.++ +|.- . .+.+.|+++ |+.+.-|.......+....
T Consensus 187 m~~~~~~~l~~~~l~--~~-~~V~D~vY~P~~-----T-~ll~~A~~~-G~~~~~Gl~MLv~Qa~~~f 244 (277)
T 3don_A 187 MNGNTDSVISLNRLA--SH-TLVSDIVYNPYK-----T-PILIEAEQR-GNPIYNGLDMFVHQGAESF 244 (277)
T ss_dssp -----CCSSCCTTCC--SS-CEEEESCCSSSS-----C-HHHHHHHHT-TCCEECTHHHHHHHHHHHH
T ss_pred CCCCCcCCCCHHHcC--CC-CEEEEecCCCCC-----C-HHHHHHHHC-cCEEeCCHHHHHHHHHHHH
Confidence 54321 122344 33 45455 4442 2 366667454 7777777655544444333
No 312
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=96.11 E-value=0.023 Score=51.09 Aligned_cols=98 Identities=22% Similarity=0.270 Sum_probs=66.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHHHHHHHHHhcC-------C-CC---------------
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQQALKLANAFD-------W-PL--------------- 60 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~~~~-------~-~~--------------- 60 (376)
++||||-|.|+||+..++++... +++++++|-|+ +.+ ...-+- +|. - .+
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~---~~a~l~-kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I 76 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTD---YMTYMF-KYDTVHGQWKHSDIKIKDSKTLLLGEKPV 76 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTSCHH---HHHHHH-HCCTTTCCCCSSCEEEEETTEEEETTEEE
T ss_pred ceEEEEECCChHHHHHHHHHHhC--CCcEEEEEeCCCCCHH---HHHHHh-hhccCCCcccCceEEEcCCcEEEECCEEE
Confidence 69999999999999988887765 78999999997 433 222222 221 1 10
Q ss_pred Ccc--CCHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 61 KVF--PGHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 61 ~~~--~~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
+++ .+.+++-. +..+|+|+-||.-..-.+.+..++++| -|-|++.-|.+
T Consensus 77 ~v~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aG-AkkViIsaps~ 128 (337)
T 3v1y_O 77 TVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGG-AKKVVISAPSK 128 (337)
T ss_dssp EEECCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTT-CCEEEESSCCS
T ss_pred EEEEecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcC-CCEEEECCCCC
Confidence 011 11221111 125899999999999999999999955 35688887753
No 313
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.11 E-value=0.034 Score=56.05 Aligned_cols=100 Identities=19% Similarity=0.183 Sum_probs=61.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHH-------hcCC-C----------CCccCCHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLAN-------AFDW-P----------LKVFPGHQ 67 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~-------~~~~-~----------~~~~~~~~ 67 (376)
+.||+|||+|.||......++.. +++|+ ++|++++.++++.+..+ +.|. + +...+|+
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a---G~~V~-l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~- 386 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS---NYPVI-LKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY- 386 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT---TCCEE-EECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC---CCEEE-EEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-
Confidence 46899999999999888888775 77866 68999986654422100 0111 0 1244666
Q ss_pred HHhhCCCCCEEEEeCCCCccH--HHHHH---HHcCCCCCeEEEecCCCCCHHH
Q 017143 68 ELLDSGLCDVVVVSTPNMTHY--QILMD---IINHPKPHHVLVEKPLCTTVAD 115 (376)
Q Consensus 68 ~~l~~~~~D~V~i~t~~~~h~--~~~~~---al~~~~g~~Vl~EKP~a~~~~e 115 (376)
+.+++ .|+|+++.|..... .+..+ .++ . ..|++--.-+.++.+
T Consensus 387 ~~~~~--aDlVIeaVpe~~~vk~~v~~~l~~~~~--~-~~IlasntStl~i~~ 434 (725)
T 2wtb_A 387 ESFRD--VDMVIEAVIENISLKQQIFADLEKYCP--Q-HCILASNTSTIDLNK 434 (725)
T ss_dssp GGGTT--CSEEEECCCSCHHHHHHHHHHHHHHSC--T-TCEEEECCSSSCHHH
T ss_pred HHHCC--CCEEEEcCcCCHHHHHHHHHHHHhhCC--C-CcEEEeCCCCCCHHH
Confidence 34554 89999999988643 33222 334 3 346654444555554
No 314
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.08 E-value=0.02 Score=51.72 Aligned_cols=75 Identities=21% Similarity=0.155 Sum_probs=47.8
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh---c--CCCCCccCCHHHHhhCCCCCE
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA---F--DWPLKVFPGHQELLDSGLCDV 77 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~---~--~~~~~~~~~~~~~l~~~~~D~ 77 (376)
|+++||+|||+|.+|...+..++.. +-.+ +.++|+++++.+ .+.++... . +..+..++++ +.+++ .|+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~--~~~~-v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~a~~~--aDv 76 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIK--QLGD-VVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-KDLEN--SDV 76 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--TCCE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT--CSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCce-EEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-HHHCC--CCE
Confidence 4568999999999999877777665 2225 458899987542 23333321 1 2222234666 45555 899
Q ss_pred EEEeCCC
Q 017143 78 VVVSTPN 84 (376)
Q Consensus 78 V~i~t~~ 84 (376)
|+++.+.
T Consensus 77 VIi~ag~ 83 (321)
T 3p7m_A 77 VIVTAGV 83 (321)
T ss_dssp EEECCSC
T ss_pred EEEcCCc
Confidence 9999753
No 315
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.06 E-value=0.0091 Score=50.38 Aligned_cols=58 Identities=21% Similarity=0.231 Sum_probs=42.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
++||+|||+|.+|......+.+. +.+++ ++|++++ .+ .+.|+|++++|+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~---g~~V~-~~~~~~~------------------------~~--~~aD~vi~av~~~ 68 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA---GHEVT-YYGSKDQ------------------------AT--TLGEIVIMAVPYP 68 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECTTCC------------------------CS--SCCSEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEE-EEcCCHH------------------------Hh--ccCCEEEEcCCcH
Confidence 57999999999999988888775 67766 5677643 22 2489999999965
Q ss_pred ccHHHHHH
Q 017143 86 THYQILMD 93 (376)
Q Consensus 86 ~h~~~~~~ 93 (376)
...+++.+
T Consensus 69 ~~~~v~~~ 76 (209)
T 2raf_A 69 ALAALAKQ 76 (209)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 54444443
No 316
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.04 E-value=0.015 Score=51.21 Aligned_cols=73 Identities=22% Similarity=0.300 Sum_probs=51.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC--CCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW--PLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
..++.|+|+|.+|+..+..+... +.+|+ |++|+++ ++++++++++. .+.. .+++++.+ ..+|+|+.+||
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~---G~~V~-v~~R~~~---~~~~la~~~~~~~~~~~-~~~~~~~~-~~~DivVn~t~ 189 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSL---DCAVT-ITNRTVS---RAEELAKLFAHTGSIQA-LSMDELEG-HEFDLIINATS 189 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSHH---HHHHHHHHTGGGSSEEE-CCSGGGTT-CCCSEEEECCS
T ss_pred CCEEEEECCcHHHHHHHHHHHHc---CCEEE-EEECCHH---HHHHHHHHhhccCCeeE-ecHHHhcc-CCCCEEEECCC
Confidence 35899999999999998888886 56655 7899987 56666665432 1111 23444433 45999999999
Q ss_pred CCcc
Q 017143 84 NMTH 87 (376)
Q Consensus 84 ~~~h 87 (376)
...+
T Consensus 190 ~~~~ 193 (271)
T 1nyt_A 190 SGIS 193 (271)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 7654
No 317
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.04 E-value=0.012 Score=56.02 Aligned_cols=93 Identities=19% Similarity=0.118 Sum_probs=59.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH-HHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR-QQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
..||.|||+|..|...+..|.+. +.+|. ++|..+... ...+.+ ++.|+++..-.+.++++.. ++|+|+++.--
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~---G~~V~-~~D~~~~~~~~~~~~L-~~~gi~~~~g~~~~~~~~~-~~d~vv~spgi 82 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL---GAIVT-VNDGKPFDENPTAQSL-LEEGIKVVCGSHPLELLDE-DFCYMIKNPGI 82 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT---TCEEE-EEESSCGGGCHHHHHH-HHTTCEEEESCCCGGGGGS-CEEEEEECTTS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CCEEE-EEeCCcccCChHHHHH-HhCCCEEEECCChHHhhcC-CCCEEEECCcC
Confidence 46899999999998766666664 88877 478754211 123333 3458762111223445443 27999887665
Q ss_pred CccHHHHHHHHcCCCCCeEEEe
Q 017143 85 MTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~E 106 (376)
..+.+.+.+|.+ +|.+|+.|
T Consensus 83 ~~~~p~~~~a~~--~gi~v~~~ 102 (451)
T 3lk7_A 83 PYNNPMVKKALE--KQIPVLTE 102 (451)
T ss_dssp CTTSHHHHHHHH--TTCCEECH
T ss_pred CCCChhHHHHHH--CCCcEEeH
Confidence 555566788889 88998865
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.96 E-value=0.034 Score=50.57 Aligned_cols=136 Identities=14% Similarity=0.156 Sum_probs=79.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhhC--CCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLDS--GLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~--~~~D~V~i 80 (376)
-+|.|+|+|.+|...+..++.. +.+++++ ++++++++ +++++|.+ .++ .++.+.+.+ ..+|+|+.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~---Ga~Vi~~-~~~~~~~~----~~~~lGa~-~~i~~~~~~~~~~~~~~~g~~d~vid 238 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAM---GLRVAAV-DIDDAKLN----LARRLGAE-VAVNARDTDPAAWLQKEIGGAHGVLV 238 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT---TCEEEEE-ESCHHHHH----HHHHTTCS-EEEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCeEEEE-eCCHHHHH----HHHHcCCC-EEEeCCCcCHHHHHHHhCCCCCEEEE
Confidence 4789999999998877666654 7787764 56666443 44566754 222 234333331 25899999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCce
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQV 158 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 158 (376)
++......+.+..+++.+ |+-|++--+.....-. +.... .+ ++.+. +........+..+.+++++|+|-.+
T Consensus 239 ~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~---~~~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~l~~~ 309 (340)
T 3s2e_A 239 TAVSPKAFSQAIGMVRRG-GTIALNGLPPGDFGTP---IFDVV-LK-GITIR-GSIVGTRSDLQESLDFAAHGDVKAT 309 (340)
T ss_dssp SSCCHHHHHHHHHHEEEE-EEEEECSCCSSEEEEE---HHHHH-HT-TCEEE-ECCSCCHHHHHHHHHHHHTTSCCCC
T ss_pred eCCCHHHHHHHHHHhccC-CEEEEeCCCCCCCCCC---HHHHH-hC-CeEEE-EEecCCHHHHHHHHHHHHhCCCCce
Confidence 998777888888888743 6555553322110001 12223 22 33332 3322233567777788888777543
No 319
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=95.94 E-value=0.0076 Score=54.79 Aligned_cols=102 Identities=15% Similarity=0.346 Sum_probs=67.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.+|+..+..++.. +.+|+ ++|+++++. ..+ .+ .+.+++++++. .|+|++++|..
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~-~~d~~~~~~------~~~-~~---~~~~l~ell~~--aDvV~~~~P~~ 208 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGF---GAKVI-AYDPYPMKG------DHP-DF---DYVSLEDLFKQ--SDVIDLHVPGI 208 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCSS------CCT-TC---EECCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEE-EECCCcchh------hHh-cc---ccCCHHHHHhc--CCEEEEcCCCc
Confidence 36899999999999998888876 78876 578877521 111 12 35689999987 89999999975
Q ss_pred ccH-----HHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCC
Q 017143 86 THY-----QILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPD 128 (376)
Q Consensus 86 ~h~-----~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~ 128 (376)
... .-....++ .| .+++.---. .+-+.+.|.++. +.++
T Consensus 209 ~~t~~li~~~~l~~mk--~g-a~lIn~srg-~~vd~~aL~~aL-~~g~ 251 (333)
T 1dxy_A 209 EQNTHIINEAAFNLMK--PG-AIVINTARP-NLIDTQAMLSNL-KSGK 251 (333)
T ss_dssp GGGTTSBCHHHHHHSC--TT-EEEEECSCT-TSBCHHHHHHHH-HTTS
T ss_pred hhHHHHhCHHHHhhCC--CC-cEEEECCCC-cccCHHHHHHHH-HhCC
Confidence 421 22344566 43 555554332 334446677777 4433
No 320
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=95.94 E-value=0.039 Score=49.42 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=67.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHHHHHHHHHhcC-----CC----------------CCc
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQQALKLANAFD-----WP----------------LKV 62 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~~~~-----~~----------------~~~ 62 (376)
|+||||-|.|+||+..++++... +++++++|-|+ +.+ ...-+- +|. ++ +++
T Consensus 1 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~---~~a~l~-kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v 74 (332)
T 3pym_A 1 MVRVAINGFGRIGRLVMRIALSR--PNVEVVALNDPFITND---YAAYMF-KYDSTHGRYAGEVSHDDKHIIVDGKKIAT 74 (332)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHS--TTCEEEEEECTTCCHH---HHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEE
T ss_pred CeEEEEECCCcHHHHHHHHHHhC--CCcEEEEEeCCCCCHH---HHHHHh-cccCCCCCCCCcEEEcCCEEEECCEEEEE
Confidence 47999999999999988887765 78999999997 444 222222 221 00 111
Q ss_pred c--CCHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 63 F--PGHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 63 ~--~~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
+ .+.+++-. +..+|+|+-||.-..-.+.+..++++| -|-|++.-|.+
T Consensus 75 ~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aG-AkkViIsaps~ 124 (332)
T 3pym_A 75 YQERDPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAG-AKKVVITAPSS 124 (332)
T ss_dssp ECCSSGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTT-CSEEEESSCCS
T ss_pred EeecccccCCccccCccEEEEecccccCHHHHHHHHHcC-CCEEEECCCCC
Confidence 2 23333321 236999999999999999999999965 35688887753
No 321
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=95.94 E-value=0.031 Score=51.92 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=60.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH--HHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR--QQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
--+|+|||.|.-|+.|..+|+.. +++|+.-. |..... .+..+-|.+-|+. +. +++|+.+. .|+|++.+|
T Consensus 37 gK~IaVIGyGsQG~AqAlNLRDS---Gv~V~Vgl-r~~s~~e~~~S~~~A~~~Gf~--v~-~~~eA~~~--ADvV~~L~P 107 (491)
T 3ulk_A 37 GKKVVIVGCGAQGLNQGLNMRDS---GLDISYAL-RKEAIAEKRASWRKATENGFK--VG-TYEELIPQ--ADLVINLTP 107 (491)
T ss_dssp TSEEEEESCSHHHHHHHHHHHHT---TCEEEEEE-CHHHHHTTCHHHHHHHHTTCE--EE-EHHHHGGG--CSEEEECSC
T ss_pred CCEEEEeCCChHhHHHHhHHHhc---CCcEEEEe-CCCCcccccchHHHHHHCCCE--ec-CHHHHHHh--CCEEEEeCC
Confidence 36899999999999999888775 88866333 211100 0222334556765 43 58889887 899999999
Q ss_pred CCccHHHHHH---HHcCCCCCeEEE
Q 017143 84 NMTHYQILMD---IINHPKPHHVLV 105 (376)
Q Consensus 84 ~~~h~~~~~~---al~~~~g~~Vl~ 105 (376)
+..|..+... .|+ .|+.+..
T Consensus 108 D~~q~~vy~~I~p~lk--~G~~L~f 130 (491)
T 3ulk_A 108 DKQHSDVVRTVQPLMK--DGAALGY 130 (491)
T ss_dssp GGGHHHHHHHHGGGSC--TTCEEEE
T ss_pred hhhHHHHHHHHHhhCC--CCCEEEe
Confidence 9999887654 355 4555443
No 322
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.93 E-value=0.016 Score=55.17 Aligned_cols=74 Identities=23% Similarity=0.271 Sum_probs=53.4
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC--CHHHHhhC---CCCCEEE
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP--GHQELLDS---GLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~---~~~D~V~ 79 (376)
..|||.|+|+|.+|...+..|... +.+++ |.|.+++ +++++.+++++. ..+. +-.+.|++ .+.|+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~---~~~v~-vId~d~~---~~~~~~~~~~~~-~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGE---NNDIT-IVDKDGD---RLRELQDKYDLR-VVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCST---TEEEE-EEESCHH---HHHHHHHHSSCE-EEESCTTCHHHHHHHTTTTCSEEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHHC---CCCEE-EEECCHH---HHHHHHHhcCcE-EEEEcCCCHHHHHhcCCCcCCEEE
Confidence 468999999999999988777664 77876 6799988 567777788765 2222 22334432 4689999
Q ss_pred EeCCCCc
Q 017143 80 VSTPNMT 86 (376)
Q Consensus 80 i~t~~~~ 86 (376)
.+|+.+.
T Consensus 74 a~t~~De 80 (461)
T 4g65_A 74 AVTNTDE 80 (461)
T ss_dssp ECCSCHH
T ss_pred EEcCChH
Confidence 8888764
No 323
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=95.93 E-value=0.12 Score=46.47 Aligned_cols=99 Identities=27% Similarity=0.364 Sum_probs=68.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC-----CC----------------CCcc-
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD-----WP----------------LKVF- 63 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~-----~~----------------~~~~- 63 (376)
++||||-|.|+||+..++++... +++++++|-|.... +...-+- +|. ++ ++++
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaind~~d~--~~~a~l~-kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~ 78 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEV--EGLEVVAVNDLTDD--DMLAHLL-KYDTMQGRFTGEVEVVDGGFRVNGKEVKSFS 78 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECSSCH--HHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEEC
T ss_pred cEEEEEECCCcHHHHHHHHHHHC--CCceEEEEecCCCH--HHHHHHh-ccCCCCCCcCCeEEEcCCEEEECCEEEEEEE
Confidence 58999999999999988887765 78999999985332 2222222 221 00 1112
Q ss_pred -CCHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 64 -PGHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 64 -~~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.+.+++-. +..+|+|+-||.-..-.+.+..++++| -|-|++.-|..
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aG-AkkViISaps~ 126 (338)
T 3lvf_P 79 EPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAG-AKKVLISAPAT 126 (338)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTT-CSEEEESSCCB
T ss_pred ecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcC-CCEEEECCCCC
Confidence 23333322 236999999999999999999999955 35688887764
No 324
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.93 E-value=0.011 Score=53.17 Aligned_cols=77 Identities=14% Similarity=0.106 Sum_probs=52.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc----CCCC--CccCCH---HHHhhCCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF----DWPL--KVFPGH---QELLDSGLCD 76 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~----~~~~--~~~~~~---~~~l~~~~~D 76 (376)
.-++.|+|+|.+|+..+..|... +++-+.|++|++++.++++++++++ +..+ ..+.+. .+.+.. .|
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~---G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~--~D 222 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE---GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS--AD 222 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH--CS
T ss_pred CCEEEEECcCHHHHHHHHHHHHc---CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC--ce
Confidence 35899999999999988888876 7744568899944444666666543 3321 123444 445555 89
Q ss_pred EEEEeCCCCcc
Q 017143 77 VVVVSTPNMTH 87 (376)
Q Consensus 77 ~V~i~t~~~~h 87 (376)
+||-+||-..+
T Consensus 223 iIINaTp~Gm~ 233 (312)
T 3t4e_A 223 ILTNGTKVGMK 233 (312)
T ss_dssp EEEECSSTTST
T ss_pred EEEECCcCCCC
Confidence 99999997653
No 325
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.90 E-value=0.029 Score=51.62 Aligned_cols=132 Identities=11% Similarity=0.013 Sum_probs=80.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhh----CCCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLD----SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~----~~~~D~V 78 (376)
-+|.|+|+|.+|...+..++.. +.+++++ ++++++++. ++++|.+ .++ .++.+.+. ...+|+|
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~---Ga~Vi~~-~~~~~~~~~----~~~lGa~-~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT---GAEVIVT-SSSREKLDR----AFALGAD-HGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT---TCEEEEE-ESCHHHHHH----HHHHTCS-EEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEE-ecCchhHHH----HHHcCCC-EEEcCCcccHHHHHHHHhCCCCceEE
Confidence 4799999999998877766654 7787765 566664443 4455654 222 24433322 2369999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCC----CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCC
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPL----CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGS 154 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~----a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~ 154 (376)
+-++. ......+.++++. .|+-|++--+. ..+. .... .+ ++.+ .+........+..+.+++++|.
T Consensus 262 id~~g-~~~~~~~~~~l~~-~G~iv~~G~~~~~~~~~~~------~~~~-~~-~~~i-~g~~~~~~~~~~~~~~l~~~g~ 330 (363)
T 3uog_A 262 LEIAG-GAGLGQSLKAVAP-DGRISVIGVLEGFEVSGPV------GPLL-LK-SPVV-QGISVGHRRALEDLVGAVDRLG 330 (363)
T ss_dssp EEETT-SSCHHHHHHHEEE-EEEEEEECCCSSCEECCBT------THHH-HT-CCEE-EECCCCCHHHHHHHHHHHHHHT
T ss_pred EECCC-hHHHHHHHHHhhc-CCEEEEEecCCCcccCcCH------HHHH-hC-CcEE-EEEecCCHHHHHHHHHHHHcCC
Confidence 99998 5567778888874 36666664322 2221 1223 23 3333 3433333456778888888887
Q ss_pred CCce
Q 017143 155 IGQV 158 (376)
Q Consensus 155 iG~i 158 (376)
+-.+
T Consensus 331 l~~~ 334 (363)
T 3uog_A 331 LKPV 334 (363)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 7554
No 326
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.90 E-value=0.028 Score=52.54 Aligned_cols=64 Identities=19% Similarity=0.282 Sum_probs=48.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
-.+|+|||+|.+|+..+..++.. +.+|+ ++|+++.+ +.. +...|+. +.++++++.. .|+|+.++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~---Ga~Vi-v~D~~p~~---a~~-A~~~G~~---~~sL~eal~~--ADVVilt~ 274 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGF---GARVV-VTEVDPIN---ALQ-AAMEGYQ---VLLVEDVVEE--AHIFVTTT 274 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHH---HHH-HHHTTCE---ECCHHHHTTT--CSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEE-EECCChhh---hHH-HHHhCCe---ecCHHHHHhh--CCEEEECC
Confidence 36899999999999988888876 78865 68998863 222 2344643 4589999987 89998754
No 327
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.90 E-value=0.014 Score=52.26 Aligned_cols=72 Identities=14% Similarity=0.217 Sum_probs=44.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
+.||+|||+|.+|......+... .-+.-+.++|++++....+.++.. +..+ +..++|+ +.+++ .|+|+++..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~--g~~~ev~L~Di~~~~~g~a~dl~~-~~~~~i~~t~d~-~~l~~--aD~Vi~aag 86 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK--GIADRLVLLDLSEGTKGATMDLEI-FNLPNVEISKDL-SASAH--SKVVIFTVN 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECCC-----CHHHHHH-HTCTTEEEESCG-GGGTT--CSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEcCCcchHHHHHHHhh-hcCCCeEEeCCH-HHHCC--CCEEEEcCC
Confidence 57999999999998766666554 223335588998864344555543 2222 3456788 45655 899999973
No 328
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.90 E-value=0.071 Score=49.00 Aligned_cols=133 Identities=16% Similarity=0.219 Sum_probs=76.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCCHHHHhhC-CCCCEEEEeCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPGHQELLDS-GLCDVVVVSTPN 84 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~D~V~i~t~~ 84 (376)
-+|.|+|+|.+|...+..++.. +.+++++ +++++++ +.+.+++|.+ +-.+++.+.+.+. ..+|+|+.++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~---Ga~Vi~~-~~~~~~~---~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF---GSKVTVI-STSPSKK---EEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEE-ESCGGGH---HHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEEE-eCCHHHH---HHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 4799999999999887766664 6787764 5666643 2333467755 1123443333221 258999999987
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCC---CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCC
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPL---CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIG 156 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~---a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG 156 (376)
......+.++++. .|+-|++--+. ..+. .... .+ ++.+. +........+..+-+++++|.+-
T Consensus 262 ~~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~------~~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~l~ 326 (366)
T 1yqd_A 262 VHPLLPLFGLLKS-HGKLILVGAPEKPLELPA------FSLI-AG-RKIVA-GSGIGGMKETQEMIDFAAKHNIT 326 (366)
T ss_dssp CCCSHHHHHHEEE-EEEEEECCCCSSCEEECH------HHHH-TT-TCEEE-ECCSCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhc-CCEEEEEccCCCCCCcCH------HHHH-hC-CcEEE-EecCCCHHHHHHHHHHHHcCCCC
Confidence 6555677788874 36555553322 1221 2233 22 43333 33222234566777777787764
No 329
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.90 E-value=0.019 Score=53.86 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=64.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCH--HHHhhC---CCCCEEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGH--QELLDS---GLCDVVVV 80 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~---~~~D~V~i 80 (376)
+.+|.|+|+|.+|+..+..|... +.+++ ++|.++++ .+.+. ++|++ .+|.|. .++|.. .+.|+|++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~---g~~vv-vId~d~~~---v~~~~-~~g~~-vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS---GVKMV-VLDHDPDH---IETLR-KFGMK-VFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT---TCCEE-EEECCHHH---HHHHH-HTTCC-CEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC---CCCEE-EEECCHHH---HHHHH-hCCCe-EEEcCCCCHHHHHhcCCCccCEEEE
Confidence 46899999999999998888875 78877 56899884 33333 45766 334332 233432 45899999
Q ss_pred eCCCCccHHHHHHHH-cCCCCCeEEEecCCCCCHHHHHHHHH
Q 017143 81 STPNMTHYQILMDII-NHPKPHHVLVEKPLCTTVADCKKVVD 121 (376)
Q Consensus 81 ~t~~~~h~~~~~~al-~~~~g~~Vl~EKP~a~~~~e~~~l~~ 121 (376)
++++...-..+...+ +.+...+|++ -+.+..++..|.+
T Consensus 75 ~~~~~~~n~~i~~~ar~~~p~~~Iia---ra~~~~~~~~L~~ 113 (413)
T 3l9w_A 75 AIDDPQTNLQLTEMVKEHFPHLQIIA---RARDVDHYIRLRQ 113 (413)
T ss_dssp CCSSHHHHHHHHHHHHHHCTTCEEEE---EESSHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhCCCCeEEE---EECCHHHHHHHHH
Confidence 999865443333333 2112335665 2344555554433
No 330
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=95.88 E-value=0.0087 Score=54.37 Aligned_cols=64 Identities=20% Similarity=0.405 Sum_probs=48.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|||||+|.+|+..+..++.. +.+|+ ++|+++++. + ++ .+ .+.+++++++. .|+|++++|..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~---G~~V~-~~d~~~~~~-----~-~~-~~---~~~~l~ell~~--aDvV~~~~p~t 209 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGM---GATVI-GEDVFEIKG-----I-ED-YC---TQVSLDEVLEK--SDIITIHAPYI 209 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSCCCS-----C-TT-TC---EECCHHHHHHH--CSEEEECCCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEE-EECCCccHH-----H-Hh-cc---ccCCHHHHHhh--CCEEEEecCCc
Confidence 46899999999999988888876 78876 578877531 1 12 12 35689999987 89999999964
No 331
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.86 E-value=0.053 Score=49.67 Aligned_cols=134 Identities=11% Similarity=0.148 Sum_probs=76.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--cCCHHHHhhC-CCCCEEEEeCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--FPGHQELLDS-GLCDVVVVSTP 83 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~-~~~D~V~i~t~ 83 (376)
-+|.|+|+|.+|...+..++.. +.+++++ ++++++ .+.+.+++|.+ .+ +++.+.+.+. ..+|+|+-++.
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~-~~~~~~---~~~~~~~lGa~-~vi~~~~~~~~~~~~~g~D~vid~~g 253 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAM---GHHVTVI-SSSNKK---REEALQDLGAD-DYVIGSDQAKMSELADSLDYVIDTVP 253 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEE-ESSTTH---HHHHHTTSCCS-CEEETTCHHHHHHSTTTEEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCeEEEE-eCChHH---HHHHHHHcCCc-eeeccccHHHHHHhcCCCCEEEECCC
Confidence 4799999999999887766665 6787765 555553 33333367765 22 3443333221 25899999998
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCC-C-HHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCc
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCT-T-VADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQ 157 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~-~-~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 157 (376)
.....+.+.++++. .|+-|++--+-.. + .. .. .. .+ ++.+. +........+..+-+++++|++-.
T Consensus 254 ~~~~~~~~~~~l~~-~G~iv~~G~~~~~~~~~~----~~-~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~l~~ 320 (357)
T 2cf5_A 254 VHHALEPYLSLLKL-DGKLILMGVINNPLQFLT----PL-LM-LG-RKVIT-GSFIGSMKETEEMLEFCKEKGLSS 320 (357)
T ss_dssp SCCCSHHHHTTEEE-EEEEEECSCCSSCCCCCH----HH-HH-HH-TCEEE-ECCSCCHHHHHHHHHHHHHTTCCC
T ss_pred ChHHHHHHHHHhcc-CCEEEEeCCCCCCccccC----HH-HH-hC-ccEEE-EEccCCHHHHHHHHHHHHcCCCCC
Confidence 76666777788874 3666665332111 1 11 11 22 12 33332 322222245667777788877743
No 332
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=95.80 E-value=0.03 Score=50.36 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=68.5
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHh------cCCC--------------CCcc-
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANA------FDWP--------------LKVF- 63 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~------~~~~--------------~~~~- 63 (376)
.|+||||-|.|+||+..++++... +++++++|-|+.. .+...-+-+. |.-. ++++
T Consensus 3 ~~~kv~INGfGrIGr~v~Ra~~~~--~~~~ivaINd~~d--~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~ 78 (345)
T 4dib_A 3 AMTRVAINGFGRIGRMVFRQAIKE--SAFEIVAINASYP--SETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLN 78 (345)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTC--SSSEEEEEECSSC--HHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEEC
T ss_pred ccEEEEEECCCcHHHHHHHHHHhC--CCceEEEEcCCCC--HHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEee
Confidence 368999999999999988887766 7899999999843 2223222221 1100 1122
Q ss_pred -CCHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 64 -PGHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 64 -~~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.+.+++-. +..+|+|+-||.-..-.+.+..++++|+ |-|++.-|..
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGA-kkViISaps~ 126 (345)
T 4dib_A 79 NRDPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGA-KKVILTAPGK 126 (345)
T ss_dssp CSCGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTC-SEEEESSCCB
T ss_pred cCChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCC-CEEEECCCCC
Confidence 23333322 2368999999999999999999999653 5688877753
No 333
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.78 E-value=0.029 Score=52.44 Aligned_cols=64 Identities=20% Similarity=0.228 Sum_probs=47.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
-+++|||+|.+|+..+..++.. +.+|+ ++|+++.+ +.+ +...|+. +.++++++.. .|+|+.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf---Ga~Vi-v~d~dp~~---a~~-A~~~G~~---vv~LeElL~~--ADIVv~atg 311 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA---GARVK-VTEVDPIC---ALQ-AAMDGFE---VVTLDDAAST--ADIVVTTTG 311 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSHHH---HHH-HHHTTCE---ECCHHHHGGG--CSEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCEEE-EEeCCcch---hhH-HHhcCce---eccHHHHHhh--CCEEEECCC
Confidence 5899999999999988888776 77866 68988863 222 2344643 3579999986 899988764
No 334
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.77 E-value=0.016 Score=52.03 Aligned_cols=126 Identities=16% Similarity=0.126 Sum_probs=73.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHh----cCCC--CCccCCHH---HHhhCCCCCE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANA----FDWP--LKVFPGHQ---ELLDSGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~----~~~~--~~~~~~~~---~~l~~~~~D~ 77 (376)
-++.|+|+|.+|+..+..|... +++-+.|++|+++..+++++++++ ++.. +..+++.+ +.+.. .|+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~---Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~--aDi 229 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD---GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE--SVI 229 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT---TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT--CSE
T ss_pred CEEEEECCChHHHHHHHHHHHC---CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC--CCE
Confidence 5899999999999988888875 774455789983223356665544 3432 12344543 44554 899
Q ss_pred EEEeCCCCccHH-----H-HHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHH
Q 017143 78 VVVSTPNMTHYQ-----I-LMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLI 147 (376)
Q Consensus 78 V~i~t~~~~h~~-----~-~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k 147 (376)
||-+||-..+.. + -...++ .+ .+.++ +|. +. .|.+.|+++ |..+.-|.......+....+
T Consensus 230 IINaTp~Gm~~~~~~~p~~~~~~l~--~~-~~V~DlvY~P~-----~T-~ll~~A~~~-G~~~~~Gl~MLv~Qa~~af~ 298 (315)
T 3tnl_A 230 FTNATGVGMKPFEGETLLPSADMLR--PE-LIVSDVVYKPT-----KT-RLLEIAEEQ-GCQTLNGLGMMLWQGAKAFE 298 (315)
T ss_dssp EEECSSTTSTTSTTCCSCCCGGGCC--TT-CEEEESCCSSS-----SC-HHHHHHHHT-TCEEECSHHHHHHHHHHHHH
T ss_pred EEECccCCCCCCCCCCCCCcHHHcC--CC-CEEEEeccCCC-----CC-HHHHHHHHC-CCeEeCcHHHHHHHHHHHHH
Confidence 999999655421 1 123344 33 44444 443 22 245555344 77776666555544444333
No 335
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=95.77 E-value=0.051 Score=48.76 Aligned_cols=102 Identities=22% Similarity=0.214 Sum_probs=67.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHH------hcCCC--------------CCcc--
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLAN------AFDWP--------------LKVF-- 63 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~------~~~~~--------------~~~~-- 63 (376)
++||||-|.|+||+..++++.....+++++++|-|+.. .+...-+-+ +|.-. ++++
T Consensus 2 ~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d--~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 2 AVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGP--VETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSC--HHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECC
T ss_pred CEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCC--HHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEee
Confidence 58999999999999888876654225899999999832 222322222 11110 1111
Q ss_pred CCHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 64 PGHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 64 ~~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
.+.+++-. +..+|+|+-||.-..-.+.+..++++| -|-|++.-|..
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aG-AkkViIsaps~ 126 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAG-AKRVIVSAPAD 126 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCT
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcC-CCEEEECCCCC
Confidence 12222211 236999999999999999999999965 35688887753
No 336
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.77 E-value=0.0051 Score=56.43 Aligned_cols=89 Identities=16% Similarity=0.208 Sum_probs=59.7
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhh----CCCCCE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLD----SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~----~~~~D~ 77 (376)
-+|.|+|+|.+|...+...+.. +. ++++ +++++++++ +++++|.+ .++ .++.+.+. ...+|+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~-~~~~~~~~~----~~~~lGa~-~vi~~~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL---GAGRIFA-VGSRKHCCD----IALEYGAT-DIINYKNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT---TCSSEEE-ECCCHHHHH----HHHHHTCC-EEECGGGSCHHHHHHHHTTTCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCcEEEE-ECCCHHHHH----HHHHhCCc-eEEcCCCcCHHHHHHHHcCCCCCCE
Confidence 4799999999999877666654 66 5665 677776544 44455654 222 23433322 235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEE
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~ 105 (376)
|+.++......+.+.++++.+ |+-|++
T Consensus 239 v~d~~g~~~~~~~~~~~l~~~-G~~v~~ 265 (352)
T 3fpc_A 239 VVIAGGDVHTFAQAVKMIKPG-SDIGNV 265 (352)
T ss_dssp EEECSSCTTHHHHHHHHEEEE-EEEEEC
T ss_pred EEECCCChHHHHHHHHHHhcC-CEEEEe
Confidence 999999878888888998743 555555
No 337
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.76 E-value=0.046 Score=49.43 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=29.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL 43 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~ 43 (376)
.-||.|||+|..|...+..|... ++.-+.++|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a---GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW---GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc---CCCEEEEecCCE
Confidence 46899999999999999888886 777677888865
No 338
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.73 E-value=0.0083 Score=53.11 Aligned_cols=74 Identities=19% Similarity=0.181 Sum_probs=51.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC--CCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW--PLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
.-++.|+|+|.+|+..+..|... ++.-+.|++|+++ ++++++++++- ++.. .+++++. .+.|+|+.+||
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~---G~~~v~v~~R~~~---~a~~la~~~~~~~~~~~-~~~~~l~--~~aDiIInaTp 196 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ---QPASITVTNRTFA---KAEQLAELVAAYGEVKA-QAFEQLK--QSYDVIINSTS 196 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---CCSEEEEEESSHH---HHHHHHHHHGGGSCEEE-EEGGGCC--SCEEEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHhc---CCCeEEEEECCHH---HHHHHHHHhhccCCeeE-eeHHHhc--CCCCEEEEcCc
Confidence 45899999999999988888875 6634558899987 56666665431 1112 2455554 35899999999
Q ss_pred CCccH
Q 017143 84 NMTHY 88 (376)
Q Consensus 84 ~~~h~ 88 (376)
...+.
T Consensus 197 ~gm~~ 201 (281)
T 3o8q_A 197 ASLDG 201 (281)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 87653
No 339
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.73 E-value=0.015 Score=52.62 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=47.1
Q ss_pred CceeEEEEe-CChhhHHHHHHhhhhcCCC-cEEEEEeCCChhhHHHHHHHHHhcCCC--CCc---cCCHHHHhhCCCCCE
Q 017143 5 DTVKYGIIG-MGMMGREHFINLHHLRSQG-VSVVCIADPHLQSRQQALKLANAFDWP--LKV---FPGHQELLDSGLCDV 77 (376)
Q Consensus 5 ~~~~v~iiG-~G~~g~~~~~~~~~~~~~~-~~~~~v~d~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~l~~~~~D~ 77 (376)
+++||+||| +|++|...+..|... +. .+|+ ++|++++ ...+.++... ..+ +.. .+++++++++ .|+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~-l~Di~~~-~~~~~dL~~~-~~~~~v~~~~~t~d~~~al~g--aDv 79 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN--PLVSVLH-LYDVVNA-PGVTADISHM-DTGAVVRGFLGQQQLEAALTG--MDL 79 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEE-EEESSSH-HHHHHHHHTS-CSSCEEEEEESHHHHHHHHTT--CSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC--CCCCEEE-EEeCCCc-HhHHHHhhcc-cccceEEEEeCCCCHHHHcCC--CCE
Confidence 568999999 799999887777654 22 4554 5787765 3334444431 111 122 2367777876 899
Q ss_pred EEEeCCC
Q 017143 78 VVVSTPN 84 (376)
Q Consensus 78 V~i~t~~ 84 (376)
|+++.+.
T Consensus 80 Vi~~ag~ 86 (326)
T 1smk_A 80 IIVPAGV 86 (326)
T ss_dssp EEECCCC
T ss_pred EEEcCCc
Confidence 9999864
No 340
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.73 E-value=0.018 Score=51.61 Aligned_cols=76 Identities=24% Similarity=0.352 Sum_probs=42.7
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHH-HHHHHHhc--CCCCCcc-CCHHHHhhCCCCCEEEEeC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQ-ALKLANAF--DWPLKVF-PGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~~~--~~~~~~~-~~~~~~l~~~~~D~V~i~t 82 (376)
+||+|||+|.+|...+..++.. ..+.-+.++|+++++.+. +.++.... ..+.+.. ++++ .+++ .|+|+++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~-a~~~--aDvVIi~~ 75 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHS-ELAD--AQVVILTA 75 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGG-GGTT--CSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHH-HhCC--CCEEEEcC
Confidence 4899999999999887777664 222235578999874431 22222111 1111122 4553 4544 89999999
Q ss_pred CCCcc
Q 017143 83 PNMTH 87 (376)
Q Consensus 83 ~~~~h 87 (376)
+...+
T Consensus 76 ~~~~~ 80 (304)
T 2v6b_A 76 GANQK 80 (304)
T ss_dssp -----
T ss_pred CCCCC
Confidence 75543
No 341
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.72 E-value=0.018 Score=53.19 Aligned_cols=71 Identities=15% Similarity=0.156 Sum_probs=48.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC----CccCCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL----KVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~D~V~i~ 81 (376)
..+|+|+|+|.+|...+..++.. +.+|+ ++|+++++ .+.+.+.++..+ ....++++++.. .|+|+.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~---Ga~V~-~~d~~~~~---~~~~~~~~g~~~~~~~~~~~~l~~~~~~--~DvVi~~ 236 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGM---GAQVT-ILDVNHKR---LQYLDDVFGGRVITLTATEANIKKSVQH--ADLLIGA 236 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESCHHH---HHHHHHHTTTSEEEEECCHHHHHHHHHH--CSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEE-EEECCHHH---HHHHHHhcCceEEEecCCHHHHHHHHhC--CCEEEEC
Confidence 47899999999999988888776 67755 67888874 334444455431 113456677764 8999999
Q ss_pred CCCC
Q 017143 82 TPNM 85 (376)
Q Consensus 82 t~~~ 85 (376)
++..
T Consensus 237 ~g~~ 240 (369)
T 2eez_A 237 VLVP 240 (369)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8754
No 342
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.71 E-value=0.033 Score=52.95 Aligned_cols=89 Identities=11% Similarity=0.048 Sum_probs=56.8
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCccCC--H----------------
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVFPG--H---------------- 66 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~--~---------------- 66 (376)
-+|.|+|+ |.+|...+..++.. +.+++++. +++++++. ++++|.+ +-.+.+ +
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~---Ga~vi~~~-~~~~~~~~----~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~ 301 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG---GANPICVV-SSPQKAEI----CRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKR 301 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEE-SSHHHHHH----HHHHTCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCeEEEEE-CCHHHHHH----HHhhCCcEEEecCcCcccccccccccchHHHHH
Confidence 47999998 99998877766654 78888765 56664443 3455654 111111 1
Q ss_pred --HHHhh---CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEE
Q 017143 67 --QELLD---SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 67 --~~~l~---~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~ 105 (376)
+++.+ ...+|+|+-++.. .....+..+++.+ |+-|++
T Consensus 302 ~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~-G~iv~~ 343 (456)
T 3krt_A 302 FGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKG-GTITTC 343 (456)
T ss_dssp HHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEE-EEEEES
T ss_pred HHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCC-cEEEEE
Confidence 22222 2369999999887 6677788888743 555555
No 343
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.69 E-value=0.016 Score=52.70 Aligned_cols=76 Identities=21% Similarity=0.303 Sum_probs=49.4
Q ss_pred CCceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh-cC-CCCCccCCHHHHhhCCCCCEEE
Q 017143 4 NDTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA-FD-WPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 4 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
|++.||+|||+ |.+|...+..+... ....-+.++|+++++.+ .+.++..- +. ..+...+++.+.+++ .|+|+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~--g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d--ADvVv 81 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMM--RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD--AKYIV 81 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHT--TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT--EEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhc--CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC--CCEEE
Confidence 44689999997 99999887766665 22222457899887442 23334322 11 123345788888876 89999
Q ss_pred EeCC
Q 017143 80 VSTP 83 (376)
Q Consensus 80 i~t~ 83 (376)
|+..
T Consensus 82 itaG 85 (343)
T 3fi9_A 82 SSGG 85 (343)
T ss_dssp ECCC
T ss_pred EccC
Confidence 9853
No 344
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.67 E-value=0.043 Score=46.56 Aligned_cols=88 Identities=13% Similarity=0.087 Sum_probs=57.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHH-HHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQ-ELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~D~V~i~t~~ 84 (376)
..+|.|||.|.+|..-+..|.+. +.+|+ |++++... ..++++++.++. -....++ +.|. +.|+|+.+|.+
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~---GA~Vt-Vvap~~~~--~l~~l~~~~~i~-~i~~~~~~~dL~--~adLVIaAT~d 101 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE---GAAIT-VVAPTVSA--EINEWEAKGQLR-VKRKKVGEEDLL--NVFFIVVATND 101 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG---CCCEE-EECSSCCH--HHHHHHHTTSCE-EECSCCCGGGSS--SCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEE-EECCCCCH--HHHHHHHcCCcE-EEECCCCHhHhC--CCCEEEECCCC
Confidence 46999999999999888888775 66766 44554432 466777665554 1112222 2343 48999999987
Q ss_pred CccHHHHHHHHcCCCCCeEE
Q 017143 85 MTHYQILMDIINHPKPHHVL 104 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl 104 (376)
..--..+.++.+ +|+.|-
T Consensus 102 ~~~N~~I~~~ak--~gi~VN 119 (223)
T 3dfz_A 102 QAVNKFVKQHIK--NDQLVN 119 (223)
T ss_dssp THHHHHHHHHSC--TTCEEE
T ss_pred HHHHHHHHHHHh--CCCEEE
Confidence 755555555556 566643
No 345
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.66 E-value=0.027 Score=51.68 Aligned_cols=88 Identities=17% Similarity=0.225 Sum_probs=56.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC-----CHHHHhhCCCCCEEEEe
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP-----GHQELLDSGLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~D~V~i~ 81 (376)
-+|.|+|+|.+|...+..++.. +.++++ +++++++++.+ +++|.+ .+++ ++.+.+. ..+|+|+.+
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~---Ga~Vi~-~~~~~~~~~~~----~~lGa~-~v~~~~~~~~~~~~~~-~~~D~vid~ 250 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM---GAETYV-ISRSSRKREDA----MKMGAD-HYIATLEEGDWGEKYF-DTFDLIVVC 250 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEE-EESSSTTHHHH----HHHTCS-EEEEGGGTSCHHHHSC-SCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEE-EcCCHHHHHHH----HHcCCC-EEEcCcCchHHHHHhh-cCCCEEEEC
Confidence 4799999999999877766665 678665 45666654433 345654 2221 3333333 358999999
Q ss_pred CCC--CccHHHHHHHHcCCCCCeEEE
Q 017143 82 TPN--MTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 82 t~~--~~h~~~~~~al~~~~g~~Vl~ 105 (376)
+.. ......+.++++.+ |+-|++
T Consensus 251 ~g~~~~~~~~~~~~~l~~~-G~iv~~ 275 (360)
T 1piw_A 251 ASSLTDIDFNIMPKAMKVG-GRIVSI 275 (360)
T ss_dssp CSCSTTCCTTTGGGGEEEE-EEEEEC
T ss_pred CCCCcHHHHHHHHHHhcCC-CEEEEe
Confidence 987 55566677777632 444444
No 346
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.65 E-value=0.076 Score=49.55 Aligned_cols=130 Identities=16% Similarity=0.150 Sum_probs=79.6
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhh----CCCCCE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLD----SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~----~~~~D~ 77 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++. ++++|.+ .++ .++.+.+. ...+|+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~-~~~~~~~~~~----~~~lGa~-~vi~~~~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHA---GASKVIL-SEPSEVRRNL----AKELGAD-HVIDPTKENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEE-ECSCHHHHHH----HHHHTCS-EEECTTTSCHHHHHHHHTTTCCCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEE-ECCCHHHHHH----HHHcCCC-EEEcCCCCCHHHHHHHHhCCCCCCE
Confidence 4799999999998877666654 77 6664 6777775444 4455654 222 23433332 235999
Q ss_pred EEEeCCCC-ccHHHHHHHH----cCCCCCeEEEecC---CCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHH
Q 017143 78 VVVSTPNM-THYQILMDII----NHPKPHHVLVEKP---LCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQI 149 (376)
Q Consensus 78 V~i~t~~~-~h~~~~~~al----~~~~g~~Vl~EKP---~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~ 149 (376)
|+-++... ...+.+.++| +. .|+-|++--+ ...+.. ... .+ ++.+.-.+.......+..+.++
T Consensus 286 vid~~g~~~~~~~~~~~~l~~~~~~-~G~iv~~G~~~~~~~~~~~------~~~-~~-~~~i~g~~~~~~~~~~~~~~~l 356 (404)
T 3ip1_A 286 FLEATGVPQLVWPQIEEVIWRARGI-NATVAIVARADAKIPLTGE------VFQ-VR-RAQIVGSQGHSGHGTFPRVISL 356 (404)
T ss_dssp EEECSSCHHHHHHHHHHHHHHCSCC-CCEEEECSCCCSCEEECHH------HHH-HT-TCEEEECCCCCSTTHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHHHHhccCC-CcEEEEeCCCCCCCcccHH------HHh-cc-ceEEEEecCCCchHHHHHHHHH
Confidence 99999876 4566677777 64 3666666332 223322 233 33 4455444433334567888899
Q ss_pred HHcCCC
Q 017143 150 VKSGSI 155 (376)
Q Consensus 150 i~~g~i 155 (376)
+++| +
T Consensus 357 l~~g-l 361 (404)
T 3ip1_A 357 MASG-M 361 (404)
T ss_dssp HHTT-C
T ss_pred HHcC-C
Confidence 9988 5
No 347
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.65 E-value=0.0032 Score=57.36 Aligned_cols=139 Identities=15% Similarity=0.094 Sum_probs=79.6
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhc-CCCCCccCCHH-HHhhCCCCCEEEEeCC
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAF-DWPLKVFPGHQ-ELLDSGLCDVVVVSTP 83 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~l~~~~~D~V~i~t~ 83 (376)
+|||||| +|..|...+..|.++.=|.++++.+.+.+.. .+.+. + +.+ ..+.+.+ +.+ .++|+|+.|+|
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a----G~~~~--~~~~~-~~~~~~~~~~~--~~~Dvvf~a~~ 72 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQ----GRKLA--FRGQE-IEVEDAETADP--SGLDIALFSAG 72 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS----SCEEE--ETTEE-EEEEETTTSCC--TTCSEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccC----CCcee--ecCCc-eEEEeCCHHHh--ccCCEEEECCC
Confidence 7999999 6999999888777642257888888765432 11111 1 111 1111111 122 35899999999
Q ss_pred CCccHHHHHHHHcCCCCCeEEEecCCCC--C------HHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 84 NMTHYQILMDIINHPKPHHVLVEKPLCT--T------VADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 84 ~~~h~~~~~~al~~~~g~~Vl~EKP~a~--~------~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
...+.+.+.++++ +|.-|+ .-+.+. + +.|..+= +.. +..+..+..+.++.-......++-+.+.+.|
T Consensus 73 ~~~s~~~a~~~~~--~G~~vI-D~Sa~~R~~~~~p~~vpevN~~-~~i-~~~~~~iIanpgC~tt~~~l~l~pL~~~~~i 147 (344)
T 3tz6_A 73 SAMSKVQAPRFAA--AGVTVI-DNSSAWRKDPDVPLVVSEVNFE-RDA-HRRPKGIIANPNCTTMAAMPVLKVLHDEARL 147 (344)
T ss_dssp HHHHHHHHHHHHH--TTCEEE-ECSSTTTTCTTSCBCCTTTSHH-HHT-TCCTTSEEECCCHHHHHHHHHHHHHHHHHCE
T ss_pred hHHHHHHHHHHHh--CCCEEE-ECCCccccCCCccEEEccCCCH-HHh-hhcCCCEEECCCcHHHHHHHHHHHHHHhCCC
Confidence 9999999999999 777544 332211 1 1111100 111 1111135555555556667777777776555
Q ss_pred CceE
Q 017143 156 GQVK 159 (376)
Q Consensus 156 G~i~ 159 (376)
.++.
T Consensus 148 ~~i~ 151 (344)
T 3tz6_A 148 VRLV 151 (344)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 4443
No 348
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=95.64 E-value=0.032 Score=50.15 Aligned_cols=78 Identities=19% Similarity=0.188 Sum_probs=54.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH--------HHHHHHHHhcCCCCCc---cCC--HHHHhh
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR--------QQALKLANAFDWPLKV---FPG--HQELLD 71 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~--------~~~~~~~~~~~~~~~~---~~~--~~~~l~ 71 (376)
+++||+++|++.++...+.+|.+. +.++++|+..-+.+. ...+++|+++|+|+.. +.+ +.+.|+
T Consensus 2 ~~mrIvf~Gt~~fa~~~L~~L~~~---~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~ 78 (314)
T 1fmt_A 2 ESLRIIFAGTPDFAARHLDALLSS---GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVA 78 (314)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHT---TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHH
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC---CCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEecCCCCCHHHHHHHH
Confidence 469999999999888888877764 689999987522111 1467889999998311 222 234455
Q ss_pred CCCCCEEEEeCCCC
Q 017143 72 SGLCDVVVVSTPNM 85 (376)
Q Consensus 72 ~~~~D~V~i~t~~~ 85 (376)
..++|+++++....
T Consensus 79 ~~~~Dliv~~~y~~ 92 (314)
T 1fmt_A 79 ELQADVMVVVAYGL 92 (314)
T ss_dssp HTTCSEEEEESCCS
T ss_pred hcCCCEEEEeeccc
Confidence 56799999887644
No 349
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.64 E-value=0.0071 Score=53.37 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=48.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC--CCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW--PLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
..++.|+|+|.+|+..+..|... +.+|+ |++|+.+ ++++++++++- .+. ..+++++.+ .+.|+|+.+||
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~---G~~v~-v~~R~~~---~a~~l~~~~~~~~~~~-~~~~~~~~~-~~~DivIn~t~ 189 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQA---QQNIV-LANRTFS---KTKELAERFQPYGNIQ-AVSMDSIPL-QTYDLVINATS 189 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT---TCEEE-EEESSHH---HHHHHHHHHGGGSCEE-EEEGGGCCC-SCCSEEEECCC
T ss_pred CCEEEEECCcHHHHHHHHHHHHC---CCEEE-EEECCHH---HHHHHHHHccccCCeE-EeeHHHhcc-CCCCEEEECCC
Confidence 35899999999999888888876 46654 7899987 56666655431 111 123443322 25899999999
Q ss_pred CCcc
Q 017143 84 NMTH 87 (376)
Q Consensus 84 ~~~h 87 (376)
...+
T Consensus 190 ~~~~ 193 (272)
T 1p77_A 190 AGLS 193 (272)
T ss_dssp C---
T ss_pred CCCC
Confidence 8765
No 350
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.64 E-value=0.025 Score=50.87 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=46.2
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh---cCCCCCc--cCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA---FDWPLKV--FPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~---~~~~~~~--~~~~~~~l~~~~~D~V~i 80 (376)
|||+|||+|.+|...+..++.. +-+.-+.++|+++++.+ .+.++... .+.+++. +++++ .+++ .|+|+|
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~-a~~~--aDvVii 75 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYG-PTED--SDVCII 75 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSG-GGTT--CSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHH-HhCC--CCEEEE
Confidence 5899999999999888888776 33434558899987542 22233221 1222223 34544 4444 899999
Q ss_pred eCCCC
Q 017143 81 STPNM 85 (376)
Q Consensus 81 ~t~~~ 85 (376)
+.+..
T Consensus 76 ~ag~~ 80 (314)
T 3nep_X 76 TAGLP 80 (314)
T ss_dssp CCCC-
T ss_pred CCCCC
Confidence 97643
No 351
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=95.63 E-value=0.022 Score=48.27 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=50.2
Q ss_pred eeEEEE--eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHHhhC
Q 017143 7 VKYGII--GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQELLDS 72 (376)
Q Consensus 7 ~~v~ii--G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~l~~ 72 (376)
+||+|+ |.|......+.++.+.. -.+++++|+...++. ...+.|+++|+|+.. +.+ +.+.|+.
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~-~~~~i~~Vvs~~~~~--~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 78 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGK-VNASIELVISDNPKA--YAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKK 78 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTS-SCEEEEEEEESCTTC--HHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCC-CCCeEEEEEeCCCCh--HHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHh
Confidence 689999 88877777777666531 134888888654432 467788899998221 222 2244555
Q ss_pred CCCCEEEEeCCCCc
Q 017143 73 GLCDVVVVSTPNMT 86 (376)
Q Consensus 73 ~~~D~V~i~t~~~~ 86 (376)
.++|+++++.....
T Consensus 79 ~~~Dliv~a~y~~i 92 (216)
T 2ywr_A 79 KGVELVVLAGFMRI 92 (216)
T ss_dssp TTCCEEEESSCCSC
T ss_pred cCCCEEEEeCchhh
Confidence 67999998876443
No 352
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=95.63 E-value=0.021 Score=54.55 Aligned_cols=74 Identities=12% Similarity=0.247 Sum_probs=49.7
Q ss_pred eeEEEEeCChhh--HHHHHHhhhhcC---CCcEEEEEeCCChhhHHHHHH----HHHhcCCC--CCccCCHHHHhhCCCC
Q 017143 7 VKYGIIGMGMMG--REHFINLHHLRS---QGVSVVCIADPHLQSRQQALK----LANAFDWP--LKVFPGHQELLDSGLC 75 (376)
Q Consensus 7 ~~v~iiG~G~~g--~~~~~~~~~~~~---~~~~~~~v~d~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~l~~~~~ 75 (376)
|||+|||.|+.| ...+..++.... ...+ ++++|+++++++.... ..+..|.+ +..++|++++|+. .
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~e-i~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~g--A 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTH-IYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEG--A 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCE-EEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTT--C
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCE-EEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCC--C
Confidence 689999999865 345544444311 1234 5589999987754333 33445655 4567899999987 8
Q ss_pred CEEEEeCC
Q 017143 76 DVVVVSTP 83 (376)
Q Consensus 76 D~V~i~t~ 83 (376)
|.|+++.-
T Consensus 78 D~Vi~~~g 85 (477)
T 3u95_A 78 DFIINTAY 85 (477)
T ss_dssp SEEEECCC
T ss_pred CEEEECcc
Confidence 99999863
No 353
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.61 E-value=0.12 Score=47.02 Aligned_cols=129 Identities=19% Similarity=0.240 Sum_probs=79.2
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--cC---C-HHHHhh------CCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--FP---G-HQELLD------SGL 74 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~~---~-~~~~l~------~~~ 74 (376)
-+|.|+|+|.+|...+..++.. +.+++ ++++++++++ +++++|.+ .+ ++ + .+++.+ ...
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~---Ga~Vi-~~~~~~~~~~----~~~~lGa~-~~~~~~~~~~~~~~i~~~~~~~~g~g 240 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY---GAFVV-CTARSPRRLE----VAKNCGAD-VTLVVDPAKEEESSIIERIRSAIGDL 240 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESCHHHHH----HHHHTTCS-EEEECCTTTSCHHHHHHHHHHHSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEE-EEcCCHHHHH----HHHHhCCC-EEEcCcccccHHHHHHHHhccccCCC
Confidence 4799999999998877666554 77855 4667776433 34466754 22 22 2 233332 235
Q ss_pred CCEEEEeCCCCccHHHHHHHHcCCCCCeEEEec---CCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHH
Q 017143 75 CDVVVVSTPNMTHYQILMDIINHPKPHHVLVEK---PLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVK 151 (376)
Q Consensus 75 ~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EK---P~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~ 151 (376)
+|+|+-++........+.++++.+ |+-|++-. +...+. .... .+ ++.+.-. .+|...+..+.++++
T Consensus 241 ~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~------~~~~-~~-~~~i~g~--~~~~~~~~~~~~l~~ 309 (352)
T 1e3j_A 241 PNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPL------VNAC-AR-EIDIKSV--FRYCNDYPIALEMVA 309 (352)
T ss_dssp CSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCCH------HHHH-TT-TCEEEEC--CSCSSCHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCccccH------HHHH-hc-CcEEEEe--ccchHHHHHHHHHHH
Confidence 999999998766677788888743 65555532 233332 2233 33 4444333 234556888889999
Q ss_pred cCCC
Q 017143 152 SGSI 155 (376)
Q Consensus 152 ~g~i 155 (376)
+|++
T Consensus 310 ~g~i 313 (352)
T 1e3j_A 310 SGRC 313 (352)
T ss_dssp TTSC
T ss_pred cCCC
Confidence 8875
No 354
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.61 E-value=0.071 Score=48.42 Aligned_cols=133 Identities=18% Similarity=0.212 Sum_probs=78.1
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhhC--CCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLDS--GLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~--~~~D~V~i 80 (376)
-+|.|+|+|.+|...+..++.. +.++++ +++++++++. ++++|.. ..+ .++.+.+.+ ..+|+|+.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~---Ga~Vi~-~~~~~~~~~~----~~~lGa~-~~~d~~~~~~~~~~~~~~~~~d~vid 236 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAM---GLNVVA-VDIGDEKLEL----AKELGAD-LVVNPLKEDAAKFMKEKVGGVHAAVV 236 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT---TCEEEE-ECSCHHHHHH----HHHTTCS-EEECTTTSCHHHHHHHHHSSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEE-EeCCHHHHHH----HHHCCCC-EEecCCCccHHHHHHHHhCCCCEEEE
Confidence 4799999999999877766665 678775 5777774443 3456654 222 233333321 35899999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCC---CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCc
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPL---CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQ 157 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~---a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 157 (376)
++......+.+.++++. .|+-|++--+. ..+. .... .+ ++.+. +........+..+.+++++|.+-.
T Consensus 237 ~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~------~~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~l~~ 306 (339)
T 1rjw_A 237 TAVSKPAFQSAYNSIRR-GGACVLVGLPPEEMPIPI------FDTV-LN-GIKII-GSIVGTRKDLQEALQFAAEGKVKT 306 (339)
T ss_dssp SSCCHHHHHHHHHHEEE-EEEEEECCCCSSEEEEEH------HHHH-HT-TCEEE-ECCSCCHHHHHHHHHHHHTTSCCC
T ss_pred CCCCHHHHHHHHHHhhc-CCEEEEecccCCCCccCH------HHHH-hC-CcEEE-EeccCCHHHHHHHHHHHHcCCCCc
Confidence 99875666777788874 25555553322 1222 1222 22 33433 322222345777888888887754
Q ss_pred e
Q 017143 158 V 158 (376)
Q Consensus 158 i 158 (376)
+
T Consensus 307 ~ 307 (339)
T 1rjw_A 307 I 307 (339)
T ss_dssp C
T ss_pred c
Confidence 3
No 355
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.60 E-value=0.12 Score=47.27 Aligned_cols=129 Identities=20% Similarity=0.165 Sum_probs=78.7
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc--C--CHHH----Hhh--CCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF--P--GHQE----LLD--SGLC 75 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~----~l~--~~~~ 75 (376)
-+|.|+|+|.+|...+..++.. +. ++++ ++++++++ ++++++|.+ .++ + +.++ +.+ ...+
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~-~~~~~~~~----~~a~~lGa~-~vi~~~~~~~~~~~~~i~~~~~~g~ 243 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAM---GAAQVVV-TDLSATRL----SKAKEIGAD-LVLQISKESPQEIARKVEGQLGCKP 243 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEE-EESCHHHH----HHHHHTTCS-EEEECSSCCHHHHHHHHHHHHTSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEE-ECCCHHHH----HHHHHhCCC-EEEcCcccccchHHHHHHHHhCCCC
Confidence 4799999999999877666654 67 6665 45666643 345567765 222 2 1122 222 1359
Q ss_pred CEEEEeCCCCccHHHHHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHc
Q 017143 76 DVVVVSTPNMTHYQILMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKS 152 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 152 (376)
|+|+.++........+.++|+.+ |+-|++- .+...+.. ... .+ ++.+.-.+ ++...+..+.+++++
T Consensus 244 D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~------~~~-~~-~~~i~g~~--~~~~~~~~~~~l~~~ 312 (356)
T 1pl8_A 244 EVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPLL------HAA-IR-EVDIKGVF--RYCNTWPVAISMLAS 312 (356)
T ss_dssp SEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCHH------HHH-HT-TCEEEECC--SCSSCHHHHHHHHHT
T ss_pred CEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCCCCccCHH------HHH-hc-ceEEEEec--ccHHHHHHHHHHHHc
Confidence 99999998766677788888843 6555543 23333432 233 33 44443332 345567888899998
Q ss_pred CCC
Q 017143 153 GSI 155 (376)
Q Consensus 153 g~i 155 (376)
|++
T Consensus 313 g~i 315 (356)
T 1pl8_A 313 KSV 315 (356)
T ss_dssp TSC
T ss_pred CCC
Confidence 875
No 356
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.55 E-value=0.022 Score=51.39 Aligned_cols=77 Identities=19% Similarity=0.260 Sum_probs=48.1
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHhcC--CCCCccCCHHHHhhCCCCCEEEE
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANAFD--WPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
+...||+|||+|.+|...+..+... +-+.-+.++|+++++++ .+.++..-.. -+++.+++..+.+++ .|+|+|
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~--aDiVvi 82 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKD--ADLVVI 82 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTT--CSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcC--CCEEEE
Confidence 3568999999999999888888776 44444558999887432 2223322111 112334333344554 899999
Q ss_pred eCCC
Q 017143 81 STPN 84 (376)
Q Consensus 81 ~t~~ 84 (376)
+...
T Consensus 83 ~ag~ 86 (326)
T 3vku_A 83 TAGA 86 (326)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8753
No 357
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.55 E-value=0.043 Score=51.12 Aligned_cols=63 Identities=17% Similarity=0.258 Sum_probs=47.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
.+++|+|+|.+|+..+..++.. +.+|+ ++|+++.+.. + +...|+. +.++++++.. .|+|+.|+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~---Ga~Vi-v~D~dp~ra~---~-A~~~G~~---v~~Leeal~~--ADIVi~at 283 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM---GSIVY-VTEIDPICAL---Q-ACMDGFR---LVKLNEVIRQ--VDIVITCT 283 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHHHH---H-HHHTTCE---ECCHHHHTTT--CSEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC---CCEEE-EEeCChhhhH---H-HHHcCCE---eccHHHHHhc--CCEEEECC
Confidence 5899999999999988888776 77855 6899886322 2 2344543 4579999986 89999974
No 358
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.54 E-value=0.052 Score=48.79 Aligned_cols=72 Identities=24% Similarity=0.320 Sum_probs=44.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCCh--hhHH-HHHHHHHh-----cCCCCCccCCHHHHhhCCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHL--QSRQ-QALKLANA-----FDWPLKVFPGHQELLDSGLC 75 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~--~~~~-~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~ 75 (376)
+..||+|||+|.+|...+..++.. +. +| .++|+++ ++.+ .+.++... ....+...+++++ +++ .
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~---g~~~v-~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a-~~~--a 79 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQK---ELADV-VLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYAD-TAD--S 79 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCCEE-EEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGG-GTT--C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC---CCCeE-EEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHH-hCC--C
Confidence 457999999999999888777765 45 54 4789983 3221 12222211 1111223456654 444 8
Q ss_pred CEEEEeCC
Q 017143 76 DVVVVSTP 83 (376)
Q Consensus 76 D~V~i~t~ 83 (376)
|+|+++..
T Consensus 80 DvVIiaag 87 (315)
T 3tl2_A 80 DVVVITAG 87 (315)
T ss_dssp SEEEECCS
T ss_pred CEEEEeCC
Confidence 99999974
No 359
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=95.53 E-value=0.036 Score=46.78 Aligned_cols=86 Identities=12% Similarity=0.051 Sum_probs=51.3
Q ss_pred eeEEEE--eCChhhHHHHHHhhhhcCC-CcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHHhh
Q 017143 7 VKYGII--GMGMMGREHFINLHHLRSQ-GVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQELLD 71 (376)
Q Consensus 7 ~~v~ii--G~G~~g~~~~~~~~~~~~~-~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~l~ 71 (376)
+||+|+ |.|......+.++.+. . +.++++|+...++. ...++|+++|+|+.. |.+ +.+.|+
T Consensus 4 ~ki~vl~sG~g~~~~~~l~~l~~~--~l~~~I~~Vit~~~~~--~v~~~A~~~gIp~~~~~~~~~~~~~~~~~~~~~~l~ 79 (212)
T 3av3_A 4 KRLAVFASGSGTNFQAIVDAAKRG--DLPARVALLVCDRPGA--KVIERAARENVPAFVFSPKDYPSKAAFESEILRELK 79 (212)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHTT--CCCEEEEEEEESSTTC--HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHH
T ss_pred cEEEEEEECCcHHHHHHHHHHHhC--CCCCeEEEEEeCCCCc--HHHHHHHHcCCCEEEeCcccccchhhhHHHHHHHHH
Confidence 566666 6666655666665543 2 68998888654432 567889999998321 111 224455
Q ss_pred CCCCCEEEEeCCCCccHHHHHHHHc
Q 017143 72 SGLCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 72 ~~~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
..++|+++++.....=.+-++.+.+
T Consensus 80 ~~~~Dliv~a~y~~il~~~~l~~~~ 104 (212)
T 3av3_A 80 GRQIDWIALAGYMRLIGPTLLSAYE 104 (212)
T ss_dssp HTTCCEEEESSCCSCCCHHHHHHTT
T ss_pred hcCCCEEEEchhhhhCCHHHHhhhc
Confidence 5679999888764433333333333
No 360
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.51 E-value=0.13 Score=41.49 Aligned_cols=75 Identities=20% Similarity=0.181 Sum_probs=48.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--CCccCCHHHHhhC--CCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--LKVFPGHQELLDS--GLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~--~~~D~V~i~ 81 (376)
..+|.-||||. |.......... ++.++++ +|.+++..+.+++..++.+++ +....+..+.+.. ..+|+|++.
T Consensus 26 ~~~vldiG~G~-G~~~~~l~~~~--~~~~v~~-vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 26 HETLWDIGGGS-GSIAIEWLRST--PQTTAVC-FEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp TEEEEEESTTT-THHHHHHHTTS--SSEEEEE-ECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred CCeEEEeCCCC-CHHHHHHHHHC--CCCeEEE-EeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 46899999995 65444444444 6788775 699998777777777666654 2122344334443 568998865
Q ss_pred CCC
Q 017143 82 TPN 84 (376)
Q Consensus 82 t~~ 84 (376)
.+-
T Consensus 102 ~~~ 104 (178)
T 3hm2_A 102 GGL 104 (178)
T ss_dssp C-T
T ss_pred Ccc
Confidence 543
No 361
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.47 E-value=0.039 Score=48.90 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=29.9
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL 43 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~ 43 (376)
+.-||.|||+|..|...+..|... ++.-+.++|.|.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a---GVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC---GIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH---TCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc---CCCEEEEECCCc
Confidence 347999999999999998888886 666666888876
No 362
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.43 E-value=0.049 Score=50.17 Aligned_cols=132 Identities=13% Similarity=0.083 Sum_probs=78.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhhC---CCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLDS---GLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~---~~~D~V 78 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++. ++++|.+ .+ + .++.+.+.+ ..+|+|
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~---Ga~~Vi~-~~~~~~~~~~----a~~lGa~-~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVC---GASIIIA-VDIVESRLEL----AKQLGAT-HVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH---TCSEEEE-EESCHHHHHH----HHHHTCS-EEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEE-ECCCHHHHHH----HHHcCCC-EEecCCccCHHHHHHHhcCCCCcEE
Confidence 4799999999999877766665 66 5554 5677765443 3455654 22 2 234333321 258999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEec-----CCCCCHHHHHHHHHHHHhCCCeEEEEeecccc--CHHHHHHHHHHH
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEK-----PLCTTVADCKKVVDAARKRPDILVQVGLEYRY--MPPVAKLIQIVK 151 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EK-----P~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~--~p~~~~~k~~i~ 151 (376)
+-++......+.+.++++.+ |+-|++-- |+..+.. ... .+ ++.+.-.+...+ ...+..+.++++
T Consensus 263 id~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~------~~~-~~-~~~i~g~~~~~~~~~~~~~~~~~l~~ 333 (371)
T 1f8f_A 263 LESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVN------DLL-LG-GKTILGVVEGSGSPKKFIPELVRLYQ 333 (371)
T ss_dssp EECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHH------HHH-HT-TCEEEECSGGGSCHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHH------HHH-hC-CCEEEEeCCCCCchHHHHHHHHHHHH
Confidence 99998766677788888743 66666532 2333432 223 23 444443322222 245778888999
Q ss_pred cCCCC
Q 017143 152 SGSIG 156 (376)
Q Consensus 152 ~g~iG 156 (376)
+|+|-
T Consensus 334 ~g~l~ 338 (371)
T 1f8f_A 334 QGKFP 338 (371)
T ss_dssp TTSCC
T ss_pred cCCCC
Confidence 88764
No 363
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.42 E-value=0.044 Score=52.03 Aligned_cols=64 Identities=22% Similarity=0.251 Sum_probs=48.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
..+|+|||+|.+|+..+..++.. +.+|+ ++|+++.+ +.+ +...|+. +.++++++.. .|+|++++
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~---G~~Vi-v~d~~~~~---~~~-a~~~g~~---~~~l~ell~~--aDiVi~~~ 320 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGL---GARVY-ITEIDPIC---AIQ-AVMEGFN---VVTLDEIVDK--GDFFITCT 320 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH---TCEEE-EECSCHHH---HHH-HHTTTCE---ECCHHHHTTT--CSEEEECC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---cCEEE-EEeCChhh---HHH-HHHcCCE---ecCHHHHHhc--CCEEEECC
Confidence 46899999999999998888887 78866 68998873 222 2234543 3589999986 89999995
No 364
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.42 E-value=0.046 Score=48.56 Aligned_cols=72 Identities=19% Similarity=0.241 Sum_probs=46.6
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH-HHHHHHHH---hcCCC--CCccCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR-QQALKLAN---AFDWP--LKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~-~~~~~~~~---~~~~~--~~~~~~~~~~l~~~~~D~V~i 80 (376)
|||+|||+|.+|......+... +-+.-+.++|.++++. ..+.++.. -.+.. +...+++++ +++ .|+|+|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~--~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~-~~~--aDvVvi 75 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL-LKG--SEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGG-GTT--CSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHH-hCC--CCEEEE
Confidence 6899999999999777666665 5555566899988643 23344432 12221 123457765 444 799999
Q ss_pred eCC
Q 017143 81 STP 83 (376)
Q Consensus 81 ~t~ 83 (376)
+.-
T Consensus 76 tAG 78 (294)
T 2x0j_A 76 TAG 78 (294)
T ss_dssp CCC
T ss_pred ecC
Confidence 875
No 365
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.35 E-value=0.064 Score=52.18 Aligned_cols=93 Identities=13% Similarity=0.084 Sum_probs=58.8
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh-------------------hhHHHHHHHHHhcC--CCCCccC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL-------------------QSRQQALKLANAFD--WPLKVFP 64 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~-------------------~~~~~~~~~~~~~~--~~~~~~~ 64 (376)
.-||.|||+|..|...+..|+.. ++.-+.++|.|. .+.+.+++..++.+ +.+..+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a---GVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~ 402 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW---GVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 402 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence 46999999999999999888886 777777888875 22232322222222 1111221
Q ss_pred ---------------------CHHHHhhCCCCCEEEEeCCCC-ccHHHHHHHHcCCCCCeEEE
Q 017143 65 ---------------------GHQELLDSGLCDVVVVSTPNM-THYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 65 ---------------------~~~~~l~~~~~D~V~i~t~~~-~h~~~~~~al~~~~g~~Vl~ 105 (376)
+.++++.. .|+|+.|+-+. .+..+...|.+ .|++++.
T Consensus 403 ~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~--~DlVvd~tDn~~tR~~ln~~c~~--~~~PlI~ 461 (615)
T 4gsl_A 403 LSIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVDSRESRWLPSLLSNI--ENKTVIN 461 (615)
T ss_dssp CCCCCTTCCCSCHHHHHHHHHHHHHHHHH--CSEEEECCSSGGGTHHHHHHHHH--TTCEEEE
T ss_pred ccccccCccccchhhhcCCHHHHHHHhhc--CCEEEecCCCHHHHHHHHHHHHH--cCCeEEE
Confidence 23455554 78888888774 55556666677 6776654
No 366
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=95.34 E-value=0.048 Score=48.94 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=54.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH--------HHHHHHHHhcCCCCC---ccCC--HHHHhhC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR--------QQALKLANAFDWPLK---VFPG--HQELLDS 72 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~--------~~~~~~~~~~~~~~~---~~~~--~~~~l~~ 72 (376)
++||.++|+..++...+..|.+. +.++++|+..-+.+. ...+++|+++|+|+. .+.+ ..+.|+.
T Consensus 2 ~mrivf~Gtp~fa~~~L~~L~~~---~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~ 78 (314)
T 3tqq_A 2 SLKIVFAGTPQFAVPTLRALIDS---SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQEKLIA 78 (314)
T ss_dssp CCEEEEEECSGGGHHHHHHHHHS---SSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHHHHHHT
T ss_pred CcEEEEECCCHHHHHHHHHHHHC---CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHHHHHHh
Confidence 48999999999998888888764 689999997422211 134688899999821 1222 3356667
Q ss_pred CCCCEEEEeCCCC
Q 017143 73 GLCDVVVVSTPNM 85 (376)
Q Consensus 73 ~~~D~V~i~t~~~ 85 (376)
.++|+++++.-..
T Consensus 79 ~~~Dliv~~~~~~ 91 (314)
T 3tqq_A 79 MNADVMVVVAYGL 91 (314)
T ss_dssp TCCSEEEEESCCS
T ss_pred cCCCEEEEcCccc
Confidence 7899999887643
No 367
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.34 E-value=0.066 Score=48.77 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=57.8
Q ss_pred eeEEEE-eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhh---CCCCCEEE
Q 017143 7 VKYGII-GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLD---SGLCDVVV 79 (376)
Q Consensus 7 ~~v~ii-G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~---~~~~D~V~ 79 (376)
-+|.|+ |+|.+|...+..++.. +.+++++ ++++++++.+ +++|.+ .++ +++.+.+. ...+|+|+
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~---Ga~Vi~~-~~~~~~~~~~----~~lGa~-~vi~~~~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAY---GLRVITT-ASRNETIEWT----KKMGAD-IVLNHKESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT---TCEEEEE-CCSHHHHHHH----HHHTCS-EEECTTSCHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc---CCEEEEE-eCCHHHHHHH----HhcCCc-EEEECCccHHHHHHHhCCCCccEEE
Confidence 478999 6899999877766654 7787765 6666644433 345654 222 23333332 23589999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEE
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~ 105 (376)
.++......+.+.++++.+ |+-|.+
T Consensus 223 d~~g~~~~~~~~~~~l~~~-G~iv~~ 247 (346)
T 3fbg_A 223 CTFNTDMYYDDMIQLVKPR-GHIATI 247 (346)
T ss_dssp ESSCHHHHHHHHHHHEEEE-EEEEES
T ss_pred ECCCchHHHHHHHHHhccC-CEEEEE
Confidence 9998777778888888743 554444
No 368
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.33 E-value=0.04 Score=49.65 Aligned_cols=131 Identities=15% Similarity=0.072 Sum_probs=76.9
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc--C--C-HHHHhhCCCCCEEEE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF--P--G-HQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~--~--~-~~~~l~~~~~D~V~i 80 (376)
-+|.|+| +|.+|...+..++.. +.++++++ +++ + .++++++|.+ .++ + + +.+.+ ..+|+|+-
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~---Ga~vi~~~--~~~---~-~~~~~~lGa~-~~i~~~~~~~~~~~~--~g~D~v~d 221 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQK---GTTVITTA--SKR---N-HAFLKALGAE-QCINYHEEDFLLAIS--TPVDAVID 221 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT---TCEEEEEE--CHH---H-HHHHHHHTCS-EEEETTTSCHHHHCC--SCEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc---CCEEEEEe--ccc---h-HHHHHHcCCC-EEEeCCCcchhhhhc--cCCCEEEE
Confidence 4789997 899999877776664 77888876 233 2 3456667765 222 2 2 33433 34899999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCce
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQV 158 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 158 (376)
++....- ..+.++++.+ |+-|.+ .. ..... +......+ ++.+.-.........+..+.+++++|.|-.+
T Consensus 222 ~~g~~~~-~~~~~~l~~~-G~iv~~--g~-~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~ 290 (321)
T 3tqh_A 222 LVGGDVG-IQSIDCLKET-GCIVSV--PT-ITAGR---VIEVAKQK-HRRAFGLLKQFNIEELHYLGKLVSEDKLRIE 290 (321)
T ss_dssp SSCHHHH-HHHGGGEEEE-EEEEEC--CS-TTHHH---HHHHHHHT-TCEEECCCCCCCHHHHHHHHHHHHTTSSCCC
T ss_pred CCCcHHH-HHHHHhccCC-CEEEEe--CC-CCchh---hhhhhhhc-ceEEEEEecCCCHHHHHHHHHHHHCCCcccc
Confidence 9886443 6667777742 554544 21 12222 22223133 5444332222233567888888898887653
No 369
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=95.29 E-value=0.048 Score=52.00 Aligned_cols=64 Identities=22% Similarity=0.237 Sum_probs=48.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 82 (376)
..+|+|||+|.+|+..+..++.+ +.+|+ ++|+++.+ ..+ +...|+. +.++++++.. .|+|++++
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~---G~~V~-v~d~~~~~---~~~-a~~~G~~---~~~l~ell~~--aDiVi~~~ 340 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGL---GATVW-VTEIDPIC---ALQ-AAMEGYR---VVTMEYAADK--ADIFVTAT 340 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEE-EECSCHHH---HHH-HHTTTCE---ECCHHHHTTT--CSEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC---CCEEE-EEeCChHh---HHH-HHHcCCE---eCCHHHHHhc--CCEEEECC
Confidence 46899999999999988888876 78866 68998863 211 2234543 3579999987 89999997
No 370
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=95.20 E-value=0.032 Score=50.16 Aligned_cols=79 Identities=14% Similarity=0.016 Sum_probs=54.8
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH--------HHHHHHHHhcCCCCCccCCH-----HHHh
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR--------QQALKLANAFDWPLKVFPGH-----QELL 70 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~--------~~~~~~~~~~~~~~~~~~~~-----~~~l 70 (376)
.+|+||.+.|+..++...+..|.+. ++++++|+..-+.+. ...+++|+++|+|+....++ -+.|
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~---~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIpv~~~~~~~~~~~~~~l 78 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED---GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVLQPLRIREKDEYEKV 78 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT---TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCCEECCSCTTSHHHHHHH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC---CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCCEEccccCCCHHHHHHH
Confidence 4679999999999988888887764 689999987532211 13678899999983111222 2345
Q ss_pred hCCCCCEEEEeCCCC
Q 017143 71 DSGLCDVVVVSTPNM 85 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~ 85 (376)
+..++|+++++.-..
T Consensus 79 ~~~~~Dliv~~~y~~ 93 (317)
T 3rfo_A 79 LALEPDLIVTAAFGQ 93 (317)
T ss_dssp HHHCCSEEEESSCCS
T ss_pred HhcCCCEEEEcCchh
Confidence 455699999887644
No 371
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.18 E-value=0.061 Score=48.98 Aligned_cols=132 Identities=9% Similarity=-0.014 Sum_probs=76.9
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC-CccCCHHHHhh----CCCCCEEEE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL-KVFPGHQELLD----SGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~----~~~~D~V~i 80 (376)
-+|.|+| +|.+|...+..++.. +.+++++ .++++++. ++++|.+. ....++.+.+. ...+|+|+-
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~---Ga~Vi~~--~~~~~~~~----~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid 222 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALAR---GARVFAT--ARGSDLEY----VRDLGATPIDASREPEDYAAEHTAGQGFDLVYD 222 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEE--ECHHHHHH----HHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHC---CCEEEEE--eCHHHHHH----HHHcCCCEeccCCCHHHHHHHHhcCCCceEEEE
Confidence 4799999 799999877766654 7788877 55554443 34455441 12234444332 235899999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccc----------cCHHHHHHHHHH
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYR----------YMPPVAKLIQIV 150 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r----------~~p~~~~~k~~i 150 (376)
++.. .....+..+++. .|+-|.+--+...+. .... .+ ++.+.-.+..+ +...+..+.+++
T Consensus 223 ~~g~-~~~~~~~~~l~~-~G~iv~~g~~~~~~~------~~~~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~ 292 (343)
T 3gaz_A 223 TLGG-PVLDASFSAVKR-FGHVVSCLGWGTHKL------APLS-FK-QATYSGVFTLHTLLANEGLAHFGEMLREADALV 292 (343)
T ss_dssp SSCT-HHHHHHHHHEEE-EEEEEESCCCSCCCC------HHHH-HT-TCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHH
T ss_pred CCCc-HHHHHHHHHHhc-CCeEEEEcccCcccc------chhh-hc-CcEEEEEEeccchhcccchHHHHHHHHHHHHHH
Confidence 9885 556777778874 366666644432222 1222 22 44443322211 124567777888
Q ss_pred HcCCCCc
Q 017143 151 KSGSIGQ 157 (376)
Q Consensus 151 ~~g~iG~ 157 (376)
++|.|-.
T Consensus 293 ~~g~l~~ 299 (343)
T 3gaz_A 293 QTGKLAP 299 (343)
T ss_dssp HTTCCCC
T ss_pred HCCCccc
Confidence 8887743
No 372
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=95.17 E-value=0.11 Score=43.80 Aligned_cols=88 Identities=14% Similarity=0.160 Sum_probs=54.1
Q ss_pred CceeEEEE--eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHHh
Q 017143 5 DTVKYGII--GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQELL 70 (376)
Q Consensus 5 ~~~~v~ii--G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~l 70 (376)
.++||+|. |.|.-....+.++... -.+++++|+...++. ...+.|+++|+|+.. |.+ +.+.|
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~--~~~eI~~Vis~~~~a--~~~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l 79 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKG--LAIEIRAVISNRADA--YGLKRAQQADIPTHIIPHEEFPSRTDFESTLQKTI 79 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTT--CSEEEEEEEESCTTC--HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEEEEEeCCcch--HHHHHHHHcCCCEEEeCccccCchhHhHHHHHHHH
Confidence 36899999 5565444555554442 368999988754442 456788899998322 122 23456
Q ss_pred hCCCCCEEEEeCCCCccHHHHHHHHc
Q 017143 71 DSGLCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
++.++|+++++.-...=.+-++...+
T Consensus 80 ~~~~~Dliv~agy~~il~~~~l~~~~ 105 (215)
T 3tqr_A 80 DHYDPKLIVLAGFMRKLGKAFVSHYS 105 (215)
T ss_dssp HTTCCSEEEESSCCSCCCHHHHHHTT
T ss_pred HhcCCCEEEEccchhhCCHHHHhhcc
Confidence 67789999998865433333444433
No 373
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.15 E-value=0.11 Score=47.44 Aligned_cols=106 Identities=15% Similarity=0.239 Sum_probs=66.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC-
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN- 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~- 84 (376)
-.+|+|+|+|.+|...+..+... +.+|+ ++|+++.+ .+++++++.. . -+.++++.. +.|+++-|.-.
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~---GakVv-vsD~~~~~----~~~a~~~ga~--~-v~~~ell~~-~~DIliP~A~~~ 242 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEA---GAQLL-VADTDTER----VAHAVALGHT--A-VALEDVLST-PCDVFAPCAMGG 242 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSCHHH----HHHHHHTTCE--E-CCGGGGGGC-CCSEEEECSCSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEE-EEeCCccH----HHHHHhcCCE--E-eChHHhhcC-ccceecHhHHHh
Confidence 46899999999999888877775 88998 99998763 4556667643 3 366788874 48988765433
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCC-CHHHHHHHHHHHHhCCCeEEE
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCT-TVADCKKVVDAARKRPDILVQ 132 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~-~~~e~~~l~~~a~~~~~~~~~ 132 (376)
....+.+ +.++ ..+++|--=.. +.+++.++++ ++ ++.+.
T Consensus 243 ~I~~~~~-~~lk----~~iVie~AN~p~t~~eA~~~L~---~~-gIlv~ 282 (355)
T 1c1d_A 243 VITTEVA-RTLD----CSVVAGAANNVIADEAASDILH---AR-GILYA 282 (355)
T ss_dssp CBCHHHH-HHCC----CSEECCSCTTCBCSHHHHHHHH---HT-TCEEC
T ss_pred hcCHHHH-hhCC----CCEEEECCCCCCCCHHHHHHHH---hC-CEEEE
Confidence 2333332 3444 35777753322 2245543332 33 65554
No 374
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.10 E-value=0.045 Score=49.43 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=48.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHH--hcCCC--CCccCCHHHHhhCCCCCEEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLAN--AFDWP--LKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~--~~~~~--~~~~~~~~~~l~~~~~D~V~i 80 (376)
..||+|||+|.+|...+..++.. +-+.-+.++|+++++.+ .+.++.. .+... +...+++++ +++ .|+|+|
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~d--aDiVIi 95 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAG--SKLVVI 95 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSS--CSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCC--CCEEEE
Confidence 57999999999999888877776 33434568899887442 2222322 12111 223467876 555 899999
Q ss_pred eCCC
Q 017143 81 STPN 84 (376)
Q Consensus 81 ~t~~ 84 (376)
+...
T Consensus 96 taG~ 99 (330)
T 3ldh_A 96 TAGA 99 (330)
T ss_dssp CCSC
T ss_pred eCCC
Confidence 8653
No 375
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.08 E-value=0.0014 Score=58.56 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=45.4
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC-CCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW-PLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
++||+|||+|.+|......|.+. +.+|+ +++++++.++ .....|. +.....+..+.+. ...|+|++++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~---g~~V~-~~~r~~~~~~----~~~~~g~~~~~~~~~~~~~~~-~~~D~vilavk~ 72 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS---LPHTT-LIGRHAKTIT----YYTVPHAPAQDIVVKGYEDVT-NTFDVIIIAVKT 72 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH---CTTCE-EEESSCEEEE----EESSTTSCCEEEEEEEGGGCC-SCEEEEEECSCG
T ss_pred CcEEEEECCCHHHHHHHHHHHHC---CCeEE-EEEeccCcEE----EEecCCeeccceecCchHhcC-CCCCEEEEeCCc
Confidence 37999999999999888888775 44555 5567655321 1112231 1112223333331 348999999998
Q ss_pred CccHHH
Q 017143 85 MTHYQI 90 (376)
Q Consensus 85 ~~h~~~ 90 (376)
....+.
T Consensus 73 ~~~~~~ 78 (294)
T 3g17_A 73 HQLDAV 78 (294)
T ss_dssp GGHHHH
T ss_pred cCHHHH
Confidence 764443
No 376
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.04 E-value=0.12 Score=46.97 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=79.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCH--HHH---hh-CCCCCEEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGH--QEL---LD-SGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---l~-~~~~D~V~i 80 (376)
-+|.|+|+|.+|...+..++... ++.++++ .++++++++. ++++|.+ .+++.- ++. +. ...+|+|+-
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~-~Ga~Vi~-~~~~~~~~~~----~~~lGa~-~vi~~~~~~~~~~~~~~g~g~D~vid 244 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALM-KNITIVG-ISRSKKHRDF----ALELGAD-YVSEMKDAESLINKLTDGLGASIAID 244 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC-TTCEEEE-ECSCHHHHHH----HHHHTCS-EEECHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhc-CCCEEEE-EeCCHHHHHH----HHHhCCC-EEeccccchHHHHHhhcCCCccEEEE
Confidence 47999999999987766554431 2678665 5677764443 4456654 333311 112 22 225899999
Q ss_pred eCCCCccHHHHHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCc
Q 017143 81 STPNMTHYQILMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQ 157 (376)
Q Consensus 81 ~t~~~~h~~~~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~ 157 (376)
++......+.+.++++. .|+-|++- .+...+.. ... .+ ++.+. +........+..+.+++++|++-.
T Consensus 245 ~~g~~~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~~------~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~i~~ 314 (344)
T 2h6e_A 245 LVGTEETTYNLGKLLAQ-EGAIILVGMEGKRVSLEAF------DTA-VW-NKKLL-GSNYGSLNDLEDVVRLSESGKIKP 314 (344)
T ss_dssp SSCCHHHHHHHHHHEEE-EEEEEECCCCSSCCCCCHH------HHH-HT-TCEEE-ECCSCCHHHHHHHHHHHHTTSSCC
T ss_pred CCCChHHHHHHHHHhhc-CCEEEEeCCCCCCcccCHH------HHh-hC-CcEEE-EEecCCHHHHHHHHHHHHcCCCCc
Confidence 99877677788888874 25555553 23333332 223 23 44433 332222346778889999988854
Q ss_pred e
Q 017143 158 V 158 (376)
Q Consensus 158 i 158 (376)
+
T Consensus 315 ~ 315 (344)
T 2h6e_A 315 Y 315 (344)
T ss_dssp C
T ss_pred c
Confidence 4
No 377
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=95.03 E-value=0.039 Score=46.56 Aligned_cols=89 Identities=12% Similarity=0.149 Sum_probs=51.5
Q ss_pred CceeEEEEeCC--hhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cC--CHHHHhhCCCC
Q 017143 5 DTVKYGIIGMG--MMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FP--GHQELLDSGLC 75 (376)
Q Consensus 5 ~~~~v~iiG~G--~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~l~~~~~ 75 (376)
++.||+|+-.| ......+.++... .-..++++|+...++. ...+.|+++|+|+.. +. .+.+.|++.++
T Consensus 7 ~~~ri~vl~SG~gsnl~all~~~~~~-~~~~~I~~Vis~~~~a--~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~ 83 (215)
T 3kcq_A 7 KELRVGVLISGRGSNLEALAKAFSTE-ESSVVISCVISNNAEA--RGLLIAQSYGIPTFVVKRKPLDIEHISTVLREHDV 83 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHTCCC--CSEEEEEEEESCTTC--THHHHHHHTTCCEEECCBTTBCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHcC-CCCcEEEEEEeCCcch--HHHHHHHHcCCCEEEeCcccCChHHHHHHHHHhCC
Confidence 45677776655 3334444444332 1247999988754432 356778899998322 21 23455666779
Q ss_pred CEEEEeCCCCccHHHHHHHHc
Q 017143 76 DVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 76 D~V~i~t~~~~h~~~~~~al~ 96 (376)
|+++++.-...=.+-++...+
T Consensus 84 Dlivlagy~~IL~~~~l~~~~ 104 (215)
T 3kcq_A 84 DLVCLAGFMSILPEKFVTDWH 104 (215)
T ss_dssp SEEEESSCCSCCCHHHHHHTT
T ss_pred CEEEEeCCceEeCHHHHhhcc
Confidence 999998865543344444433
No 378
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=95.02 E-value=0.088 Score=45.43 Aligned_cols=98 Identities=11% Similarity=0.029 Sum_probs=63.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--C-CccCCHHHHhhCCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--L-KVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~l~~~~~D~V~i~t 82 (376)
..+|.-+|||. |.......... .+..++++ +|.+++..+.+++..+++|++ + -...|+.+.+.+..+|+|+...
T Consensus 94 ~~~vldiG~G~-G~~~~~l~~~~-~~~~~v~~-~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 94 GDFIVEAGVGS-GALTLFLANIV-GPEGRVVS-YEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDL 170 (255)
T ss_dssp TCEEEEECCTT-SHHHHHHHHHH-CTTSEEEE-ECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECS
T ss_pred CCEEEEecCCc-hHHHHHHHHHh-CCCeEEEE-EecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECC
Confidence 46899999995 55433333332 25778776 699998887777777666754 1 1235666666666689998876
Q ss_pred CCC-ccHHHHHHHHcCCCCCeEEEecC
Q 017143 83 PNM-THYQILMDIINHPKPHHVLVEKP 108 (376)
Q Consensus 83 ~~~-~h~~~~~~al~~~~g~~Vl~EKP 108 (376)
|.. .-.+.+.++|+ .|-.+++.-|
T Consensus 171 ~~~~~~l~~~~~~L~--~gG~l~~~~~ 195 (255)
T 3mb5_A 171 PQPERVVEHAAKALK--PGGFFVAYTP 195 (255)
T ss_dssp SCGGGGHHHHHHHEE--EEEEEEEEES
T ss_pred CCHHHHHHHHHHHcC--CCCEEEEEEC
Confidence 653 35666667777 4445555444
No 379
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.02 E-value=0.042 Score=50.48 Aligned_cols=134 Identities=15% Similarity=0.110 Sum_probs=79.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc----cCCHHHHhh----CCCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV----FPGHQELLD----SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~----~~~~D~V 78 (376)
-+|.|+|+|.+|...+...+.. +.+.+.++++++++++.+++++.. -+.... -.++.+.+. ...+|+|
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~~~~~~~~~~~a~~l~~~-~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAA---GACPLVITDIDEGRLKFAKEICPE-VVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCSEEEEESCHHHHHHHHHHCTT-CEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEEECCCHHHHHHHHHhchh-cccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 4789999999998877666554 777334567788766655554211 110000 012222221 2369999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
+-++........+.++++.+ |+-|++- .+...+.. ... .+ ++.+.-.+ ++...+..+.+++++|++
T Consensus 257 id~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~------~~~-~~-~~~i~g~~--~~~~~~~~~~~l~~~g~i 325 (363)
T 3m6i_A 257 LECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQIPFM------RAS-VR-EVDLQFQY--RYCNTWPRAIRLVENGLV 325 (363)
T ss_dssp EECSCCHHHHHHHHHHSCTT-CEEEECCCCCSCCCCCHH------HHH-HH-TCEEEECC--SCSSCHHHHHHHHHTTSS
T ss_pred EECCCChHHHHHHHHHhcCC-CEEEEEccCCCCccccHH------HHH-hc-CcEEEEcc--CCHHHHHHHHHHHHhCCC
Confidence 99999877788888999853 6666653 33333332 233 22 33333322 335667888899999887
No 380
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.98 E-value=0.042 Score=49.82 Aligned_cols=74 Identities=9% Similarity=0.194 Sum_probs=47.6
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCC------cEEEEEeCCC----hhhHH-HHHHHHHh-cCC--CCCccCCHHHH
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQG------VSVVCIADPH----LQSRQ-QALKLANA-FDW--PLKVFPGHQEL 69 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~------~~~~~v~d~~----~~~~~-~~~~~~~~-~~~--~~~~~~~~~~~ 69 (376)
+++||+|+|+ |++|...+..+... +. .+|+ ++|++ +++.+ .+.++... +.+ ++..++++.+.
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~-l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQ-LLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEE-EECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEE-EEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 4689999997 99999888777664 22 2555 58988 44221 23334321 111 12344778888
Q ss_pred hhCCCCCEEEEeCC
Q 017143 70 LDSGLCDVVVVSTP 83 (376)
Q Consensus 70 l~~~~~D~V~i~t~ 83 (376)
+++ .|+|+++..
T Consensus 81 l~~--aD~Vi~~ag 92 (329)
T 1b8p_A 81 FKD--ADVALLVGA 92 (329)
T ss_dssp TTT--CSEEEECCC
T ss_pred hCC--CCEEEEeCC
Confidence 876 899998876
No 381
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.93 E-value=0.058 Score=48.34 Aligned_cols=72 Identities=24% Similarity=0.226 Sum_probs=46.7
Q ss_pred eEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHH-HHHHHHh---c--CCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 8 KYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQ-ALKLANA---F--DWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 8 ~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~~---~--~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
||+|||+|.+|...+..+... ++.-+.++|+++++++. +.++... . ...+..++++ +.+++ .|+|+++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~---~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~--aD~Vi~~ 74 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR---GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRG--SDIVLVT 74 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH---TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT--CSEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHhC---CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCC--CCEEEEe
Confidence 799999999999877666654 33335578999875532 3333321 2 2223344677 45655 8999999
Q ss_pred CCCC
Q 017143 82 TPNM 85 (376)
Q Consensus 82 t~~~ 85 (376)
.+..
T Consensus 75 ag~~ 78 (308)
T 2d4a_B 75 AGIG 78 (308)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 7654
No 382
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.92 E-value=0.046 Score=49.15 Aligned_cols=72 Identities=24% Similarity=0.268 Sum_probs=47.1
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--CCc---cCCHHHHhhCCCCCEEEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--LKV---FPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~l~~~~~D~V~i 80 (376)
+||+|||+ |.+|...+..|... +-+.-+.++|+++ ....+.++... ..+ +.. .+++++.+++ .|+|++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~-~~~~a~dL~~~-~~~~~l~~~~~t~d~~~a~~~--aDvVvi 74 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAH-TPGVAADLSHI-ETRATVKGYLGPEQLPDCLKG--CDVVVI 74 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSS-HHHHHHHHTTS-SSSCEEEEEESGGGHHHHHTT--CSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCc-cHHHHHHHhcc-CcCceEEEecCCCCHHHHhCC--CCEEEE
Confidence 48999998 99999877777654 2233355789887 32344444332 111 222 2478888876 899999
Q ss_pred eCCC
Q 017143 81 STPN 84 (376)
Q Consensus 81 ~t~~ 84 (376)
+...
T Consensus 75 ~ag~ 78 (314)
T 1mld_A 75 PAGV 78 (314)
T ss_dssp CCSC
T ss_pred CCCc
Confidence 8754
No 383
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.92 E-value=0.051 Score=49.93 Aligned_cols=73 Identities=19% Similarity=0.106 Sum_probs=47.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCC--ccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLK--VFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
.-+|.|+|+|.+|...+..++.. +.+|+ ++|+++++++.+++..... +.+. ...++.+.+.. .|+|+.+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~---Ga~V~-v~dr~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~DvVI~~~~ 239 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL---GAQVQ-IFDINVERLSYLETLFGSR-VELLYSNSAEIETAVAE--ADLLIGAVL 239 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EEESCHHHHHHHHHHHGGG-SEEEECCHHHHHHHHHT--CSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEE-EEeCCHHHHHHHHHhhCce-eEeeeCCHHHHHHHHcC--CCEEEECCC
Confidence 36899999999999988888876 56655 6899988655444332111 1000 11234555554 899999987
Q ss_pred CC
Q 017143 84 NM 85 (376)
Q Consensus 84 ~~ 85 (376)
..
T Consensus 240 ~~ 241 (361)
T 1pjc_A 240 VP 241 (361)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 384
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=94.89 E-value=0.12 Score=47.36 Aligned_cols=136 Identities=8% Similarity=0.075 Sum_probs=78.5
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCC-------HHHHhhC-CCCCE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPG-------HQELLDS-GLCDV 77 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~-~~~D~ 77 (376)
-+|.|+|+ |.+|...+...+.. +.+++++++.++.+.+ ..++++++|.+ .+++. +.++... ..+|+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~~~~~~-~~~~~~~lGa~-~vi~~~~~~~~~~~~~~~~~~~~Dv 243 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAAL---GLRTINVVRDRPDIQK-LSDRLKSLGAE-HVITEEELRRPEMKNFFKDMPQPRL 243 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH---TCEEEEEECCCSCHHH-HHHHHHHTTCS-EEEEHHHHHSGGGGGTTSSSCCCSE
T ss_pred CEEEEeCCcCHHHHHHHHHHHHc---CCEEEEEecCccchHH-HHHHHHhcCCc-EEEecCcchHHHHHHHHhCCCCceE
Confidence 47999997 99999877766665 7888988887654222 23456677865 33331 1122222 14899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEe----cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccc---------cCHHHH
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVE----KPLCTTVADCKKVVDAARKRPDILVQVGLEYR---------YMPPVA 144 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~E----KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r---------~~p~~~ 144 (376)
|+-++....- ..+.++++. .|+-|++- +|...+... .. .+ ++.+.-.+... +...+.
T Consensus 244 vid~~g~~~~-~~~~~~l~~-~G~iv~~G~~~~~~~~~~~~~------~~-~~-~~~i~g~~~~~~~~~~~~~~~~~~~~ 313 (357)
T 1zsy_A 244 ALNCVGGKSS-TELLRQLAR-GGTMVTYGGMAKQPVVASVSL------LI-FK-DLKLRGFWLSQWKKDHSPDQFKELIL 313 (357)
T ss_dssp EEESSCHHHH-HHHHTTSCT-TCEEEECCCCTTCCBCCCHHH------HH-HS-CCEEEECCHHHHHHHSCHHHHHHHHH
T ss_pred EEECCCcHHH-HHHHHhhCC-CCEEEEEecCCCCCCCCCHHH------HH-hc-CceEEEEEcchhcccCCHHHHHHHHH
Confidence 9999875432 345666764 36666652 344444422 22 23 44443322211 122356
Q ss_pred HHHHHHHcCCCCc
Q 017143 145 KLIQIVKSGSIGQ 157 (376)
Q Consensus 145 ~~k~~i~~g~iG~ 157 (376)
.+.+++++|+|-.
T Consensus 314 ~~~~l~~~g~l~~ 326 (357)
T 1zsy_A 314 TLCDLIRRGQLTA 326 (357)
T ss_dssp HHHHHHHTTSSCC
T ss_pred HHHHHHHcCCCcC
Confidence 7778888888753
No 385
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.88 E-value=0.085 Score=45.03 Aligned_cols=91 Identities=14% Similarity=0.007 Sum_probs=54.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--CccCCHHHHhh--CCCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVFPGHQELLD--SGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~--~~~~D~V~i~ 81 (376)
+.+|.|+|+|.+|...+..|... +. ++ ++|++++. ++++. .++.+ .-.++.+.+-+ -.+.|+|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~---g~-v~-vid~~~~~---~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS---EV-FV-LAEDENVR---KKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS---EE-EE-EESCGGGH---HHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHhC---Ce-EE-EEECCHHH---HHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 46899999999999988887664 55 55 67998874 44433 45431 11233333322 1358999999
Q ss_pred CCCCccHHHHHH-HHcCCCCCeEEEe
Q 017143 82 TPNMTHYQILMD-IINHPKPHHVLVE 106 (376)
Q Consensus 82 t~~~~h~~~~~~-al~~~~g~~Vl~E 106 (376)
++++.--..+.. |-+.+...+|++.
T Consensus 79 ~~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 79 LESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp CSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 998643333333 3231133366664
No 386
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.87 E-value=0.055 Score=48.94 Aligned_cols=75 Identities=13% Similarity=0.189 Sum_probs=47.1
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh--cC-CC-CCccCCHHHHhhCCCCCEE
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA--FD-WP-LKVFPGHQELLDSGLCDVV 78 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~--~~-~~-~~~~~~~~~~l~~~~~D~V 78 (376)
.+..||+|||+|.+|......+... +-+.-+.++|+++++.+ .+.++..- +. .+ +...+++++ +++ .|+|
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~~~--aDiV 91 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-TAN--SKLV 91 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-GTT--EEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-hCC--CCEE
Confidence 3468999999999999877777664 33334558999887432 22333321 21 11 123467775 554 8999
Q ss_pred EEeCC
Q 017143 79 VVSTP 83 (376)
Q Consensus 79 ~i~t~ 83 (376)
+|+..
T Consensus 92 vi~aG 96 (331)
T 4aj2_A 92 IITAG 96 (331)
T ss_dssp EECCS
T ss_pred EEccC
Confidence 99864
No 387
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=94.83 E-value=0.1 Score=47.19 Aligned_cols=99 Identities=19% Similarity=0.176 Sum_probs=64.7
Q ss_pred ceeEEEEeCChhhHHHHHH----hhhhcCCCcEEEEEeCC--ChhhHHHHHHHHH------hcCCCC-------------
Q 017143 6 TVKYGIIGMGMMGREHFIN----LHHLRSQGVSVVCIADP--HLQSRQQALKLAN------AFDWPL------------- 60 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~----~~~~~~~~~~~~~v~d~--~~~~~~~~~~~~~------~~~~~~------------- 60 (376)
++||||-|.|+||+..+++ +... +++++++|-|+ +.+ ...-+-+ +|.-.+
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~--~~~~vvaINd~~~d~~---~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~ 76 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLG--TEIDVVAVVDMNTDAE---YFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDD 76 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBT--TTEEEEEEECSSCCHH---HHHHHHHEETTTEECSSCEEEECSCTTSSSCC
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcC--CCcEEEEEecCCCCHH---HHHHHhcccCCCCCEeeEEEecccccccCCCC
Confidence 5899999999999988887 4443 68999999995 333 2222221 111111
Q ss_pred ---------CccC---CHHHHhh-CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCC
Q 017143 61 ---------KVFP---GHQELLD-SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLC 110 (376)
Q Consensus 61 ---------~~~~---~~~~~l~-~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a 110 (376)
+++. +.+++-. +..+|+|+-||.-..-.+.+..++++|+ |-|++--|..
T Consensus 77 ~l~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGA-kkViISaps~ 138 (359)
T 3ids_C 77 TLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGA-RKVVISAPAS 138 (359)
T ss_dssp EEEETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTC-CEEEESSCCB
T ss_pred EEEECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCC-CEEEECCCCC
Confidence 1121 2222110 1258999999999999999999999653 5688877754
No 388
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=94.82 E-value=0.071 Score=49.88 Aligned_cols=78 Identities=10% Similarity=0.087 Sum_probs=50.3
Q ss_pred ceeEEEEeCChh-hHHHHHHhhh-hcC-CCcEEEEEeCCChhhHHHHHHHHHhc---CCCCCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMGMM-GREHFINLHH-LRS-QGVSVVCIADPHLQSRQQALKLANAF---DWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G~~-g~~~~~~~~~-~~~-~~~~~~~v~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
++||+|||+|.. +...+..+.. ..+ +.-+ +.++|+++++++.+..++... ...+..++|+++.+++ .|+|+
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~e-l~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~--AD~Vi 78 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDE-VIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVD--AKYVI 78 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCE-EEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTT--CSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCE-EEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCC--CCEEE
Confidence 579999999984 2233334444 211 2344 558999998776655555422 1223456788888876 89999
Q ss_pred EeCCCCc
Q 017143 80 VSTPNMT 86 (376)
Q Consensus 80 i~t~~~~ 86 (376)
++.....
T Consensus 79 itagvg~ 85 (417)
T 1up7_A 79 FQFRPGG 85 (417)
T ss_dssp ECCCTTH
T ss_pred EcCCCCC
Confidence 9996543
No 389
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=94.81 E-value=0.092 Score=43.60 Aligned_cols=75 Identities=15% Similarity=-0.026 Sum_probs=47.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CC-ccCCHHHHhh-CCCCCEEEEeC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LK-VFPGHQELLD-SGLCDVVVVST 82 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~-~~~~D~V~i~t 82 (376)
..+|.-||||. |...+...... +..++++ +|.+++..+.+++..++.+++ +. ...+..+.+. ...+|+|++..
T Consensus 41 ~~~vLDiG~G~-G~~~~~la~~~--~~~~v~~-vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 41 DLVMWDIGAGS-ASVSIEASNLM--PNGRIFA-LERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCEEEEETCTT-CHHHHHHHHHC--TTSEEEE-EECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCEEEEECCCC-CHHHHHHHHHC--CCCEEEE-EeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 46899999994 55433333333 5678876 699999887777777666654 11 2244434333 25689988776
Q ss_pred CC
Q 017143 83 PN 84 (376)
Q Consensus 83 ~~ 84 (376)
+.
T Consensus 117 ~~ 118 (204)
T 3e05_A 117 SG 118 (204)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 390
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=94.75 E-value=0.04 Score=49.45 Aligned_cols=74 Identities=27% Similarity=0.341 Sum_probs=46.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHH-HHHHHHHh--cCCCCCcc-CCHHHHhhCCCCCEEEEeC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQ-QALKLANA--FDWPLKVF-PGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~-~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~D~V~i~t 82 (376)
+||+|||+|.+|...+..+... +-+.-+.++|+++++++ .+.++... +..+++.. ++++ .+++ .|+|+++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~-a~~~--aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL--GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYG-DLEG--ARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGG-GGTT--EEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHH-HhCC--CCEEEECC
Confidence 5899999999999877766665 33444558899987543 23344321 11122222 4444 4554 89999998
Q ss_pred CCC
Q 017143 83 PNM 85 (376)
Q Consensus 83 ~~~ 85 (376)
+..
T Consensus 76 g~~ 78 (310)
T 2xxj_A 76 GVA 78 (310)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 391
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=94.74 E-value=0.084 Score=44.67 Aligned_cols=79 Identities=18% Similarity=0.133 Sum_probs=53.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC---CHHHHhhCCCCCEEEEe
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP---GHQELLDSGLCDVVVVS 81 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~D~V~i~ 81 (376)
++-|+.|+|+|..|+..+..+.+ .+++++++.|.++.. . .-.|+| ++. +++++.+.. .+.++++
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~---~~~~~vgfiDd~~~~----~---~~~g~~--Vlg~~~~~~~~~~~~-~~~v~iA 77 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRA---CGETVAAIVDADPTR----R---AVLGVP--VVGDDLALPMLREQG-LSRLFVA 77 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH---TTCCEEEEECSCC----------CBTTBC--EEESGGGHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHh---CCCEEEEEEeCCccc----C---cCCCee--EECCHHHHHHhhccc-ccEEEEe
Confidence 35689999999999998888776 479999999977651 1 134666 443 355555543 7788888
Q ss_pred CCCC-ccHHHHHHHHc
Q 017143 82 TPNM-THYQILMDIIN 96 (376)
Q Consensus 82 t~~~-~h~~~~~~al~ 96 (376)
.++. .+.++...+.+
T Consensus 78 Ig~~~~R~~i~~~l~~ 93 (220)
T 4ea9_A 78 IGDNRLRQKLGRKARD 93 (220)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 8864 34444444555
No 392
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=94.73 E-value=0.043 Score=49.60 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=49.9
Q ss_pred CCceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC-Ch-hhHHHHHHHHHhcCCCCCccCC----------HHHHhh
Q 017143 4 NDTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP-HL-QSRQQALKLANAFDWPLKVFPG----------HQELLD 71 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~-~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~l~ 71 (376)
|+++||+++|...++...+..+... +.++++|+.. +. .+....+++|+++|+|+...++ +.+.|+
T Consensus 20 ~~~mrIvf~G~~~fa~~~L~~L~~~---~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~~~~~~l~ 96 (329)
T 2bw0_A 20 FQSMKIAVIGQSLFGQEVYCHLRKE---GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQ 96 (329)
T ss_dssp -CCCEEEEECCHHHHHHHHHHHHHT---TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHH
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHC---CCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCcccccccccHHHHHHHH
Confidence 3468999999877776666666654 6899999862 21 0011355788899998322222 234555
Q ss_pred CCCCCEEEEeCC
Q 017143 72 SGLCDVVVVSTP 83 (376)
Q Consensus 72 ~~~~D~V~i~t~ 83 (376)
..++|+++++.-
T Consensus 97 ~~~~Dliv~a~y 108 (329)
T 2bw0_A 97 ALGAELNVLPFC 108 (329)
T ss_dssp TTCCSEEEESSC
T ss_pred hcCCCEEEEeeh
Confidence 667999998765
No 393
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=94.72 E-value=0.12 Score=52.20 Aligned_cols=122 Identities=16% Similarity=0.204 Sum_probs=79.7
Q ss_pred CceeEEEEeCChhhHHHHHHhhhh----cCCCcEEEEEeCCChhhHHHHHHH---HHhcCCCCCccCCHHHHhhC-CCCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHL----RSQGVSVVCIADPHLQSRQQALKL---ANAFDWPLKVFPGHQELLDS-GLCD 76 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~----~~~~~~~~~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~-~~~D 76 (376)
+..|+.|-|+-. + |+..+... ..++.++++.+++.... .-+++ ..+.|+| +|.|++++.+. +++|
T Consensus 495 ~~trviV~G~tg--~-~~~~ml~~~~~~~~~~~~vVa~V~P~~~g--~~~~~~~G~~~~Gvp--~y~sv~ea~~~~p~~D 567 (829)
T 3pff_A 495 RHTKAIVWGMQT--R-AVQGMLDFDYVCSRDEPSVAAMVYPFTGD--HKQKFYWGHKEILIP--VFKNMADAMRKHPEVD 567 (829)
T ss_dssp TTCCEEEESCCH--H-HHHHHHHHHHHTTCSSCSEEEEECTTSCS--EEEEEEETTEEEEEE--EESSHHHHHHHCTTCC
T ss_pred CCCeEEEECCcH--H-HHHHHHHhcccccCCCCcEEEEEcCCCCC--ccceEEecCCcCCcc--cCCcHHHHhhccCCCc
Confidence 458999999752 2 55554443 11568899999876531 00111 1123555 99999999875 4699
Q ss_pred EEEEeCCCCccHHHHHHHHc-CCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeecc
Q 017143 77 VVVVSTPNMTHYQILMDIIN-HPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEY 137 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~-~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~ 137 (376)
+++|++|+..-.+.+.+|++ .| -+.+.|=- -.....+.++|.+.|++. |+ -.+|.|+
T Consensus 568 laVI~vP~~~v~~av~ea~~~~G-vk~~Viis-~Gf~e~~~~~l~~~A~~~-g~-rliGPNc 625 (829)
T 3pff_A 568 VLINFASLRSAYDSTMETMNYAQ-IRTIAIIA-EGIPEALTRKLIKKADQK-GV-TIIGPAT 625 (829)
T ss_dssp EEEECCCTTTHHHHHHHHTTSTT-CCEEEECC-SCCCHHHHHHHHHHHHHH-TC-EEECSSC
T ss_pred EEEEeCCHHHHHHHHHHHHhhCC-CCEEEEeC-CCCCHHHHHHHHHHHHHc-CC-EEEcCCC
Confidence 99999999999999999998 54 23343422 223446778999999554 65 3455544
No 394
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=94.66 E-value=0.064 Score=45.01 Aligned_cols=90 Identities=12% Similarity=-0.008 Sum_probs=51.8
Q ss_pred CCceeEEEEeCCh--hhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHH
Q 017143 4 NDTVKYGIIGMGM--MGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQEL 69 (376)
Q Consensus 4 ~~~~~v~iiG~G~--~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~ 69 (376)
|++.||+|+-.|. .....+.++... .-.+++++|+...++. ...+.|+++|+|+.. |.+ +.+.
T Consensus 5 m~~~ri~vl~SG~gsnl~all~~~~~~-~l~~~I~~Visn~~~a--~~l~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~ 81 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSNMEALIRAAQAP-GFPAEIVAVFSDKAEA--GGLAKAEAAGIATQVFKRKDFASKEAHEDAILAA 81 (209)
T ss_dssp -CCEEEEEEESSCCHHHHHHHHHHTST-TCSEEEEEEEESCTTC--THHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHH
T ss_pred CCCccEEEEEECCcHHHHHHHHHHHcC-CCCcEEEEEEECCccc--HHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHH
Confidence 4567888877663 333444444332 1247999988754432 345788899998322 222 2244
Q ss_pred hhCCCCCEEEEeCCCCccHHHHHHHHc
Q 017143 70 LDSGLCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
|++.++|+++++.-...=.+-++...+
T Consensus 82 l~~~~~Dliv~agy~~il~~~~l~~~~ 108 (209)
T 4ds3_A 82 LDVLKPDIICLAGYMRLLSGRFIAPYE 108 (209)
T ss_dssp HHHHCCSEEEESSCCSCCCHHHHGGGT
T ss_pred HHhcCCCEEEEeccccCcCHHHHhhcc
Confidence 555679999998865543334444433
No 395
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.63 E-value=0.1 Score=50.67 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=28.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPH 42 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~ 42 (376)
.-||.|||+|..|...+..|+.. ++.=+.++|.|
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a---GVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW---GVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 46899999999999999888886 67666788776
No 396
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.63 E-value=0.069 Score=48.49 Aligned_cols=89 Identities=11% Similarity=0.034 Sum_probs=54.6
Q ss_pred eeEEEEeCC-hhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhh----CCCCCE
Q 017143 7 VKYGIIGMG-MMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLD----SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~G-~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~----~~~~D~ 77 (376)
-+|.|+|+| .+|...+..++.. +.+++++ ++++++++.+++ +|.+ .+ + .++.+.+. ...+|+
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~-~~~~~~~~~~~~----lga~-~~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQIL---NFRLIAV-TRNNKHTEELLR----LGAA-YVIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH---TCEEEEE-ESSSTTHHHHHH----HTCS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHc---CCEEEEE-eCCHHHHHHHHh----CCCc-EEEeCCcccHHHHHHHHhCCCCCcE
Confidence 479999987 8998877766665 6787765 566665544444 4543 11 1 23333322 235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
|+-++....-.. +..+++. .|+-|++-
T Consensus 217 vid~~g~~~~~~-~~~~l~~-~G~iv~~G 243 (340)
T 3gms_A 217 AIDSIGGPDGNE-LAFSLRP-NGHFLTIG 243 (340)
T ss_dssp EEESSCHHHHHH-HHHTEEE-EEEEEECC
T ss_pred EEECCCChhHHH-HHHHhcC-CCEEEEEe
Confidence 999888654333 3467764 36666664
No 397
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.61 E-value=0.34 Score=45.72 Aligned_cols=89 Identities=16% Similarity=0.114 Sum_probs=56.4
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC----C----------------
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP----G---------------- 65 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~----~---------------- 65 (376)
-+|.|+|+ |.+|...+..++.. +.+++++. +++++++ +++++|.+ .+++ +
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~---Ga~vi~~~-~~~~~~~----~~~~lGa~-~~i~~~~~~~~~~~~~~~~~~~~~~ 292 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNG---GGIPVAVV-SSAQKEA----AVRALGCD-LVINRAELGITDDIADDPRRVVETG 292 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT---TCEEEEEE-SSHHHHH----HHHHTTCC-CEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCEEEEEe-CCHHHHH----HHHhcCCC-EEEecccccccccccccccccchhh
Confidence 47999998 99999877666654 78888765 5666433 34566754 2222 1
Q ss_pred ---HHHHhh--CCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 66 ---HQELLD--SGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 66 ---~~~~l~--~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
.+++.+ ...+|+|+-++.. .....+..+++.+ |+-|++-
T Consensus 293 ~~~~~~v~~~~g~g~Dvvid~~G~-~~~~~~~~~l~~~-G~iv~~G 336 (447)
T 4a0s_A 293 RKLAKLVVEKAGREPDIVFEHTGR-VTFGLSVIVARRG-GTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHSSCCSEEEECSCH-HHHHHHHHHSCTT-CEEEESC
T ss_pred hHHHHHHHHHhCCCceEEEECCCc-hHHHHHHHHHhcC-CEEEEEe
Confidence 111211 2359999998886 3566777788743 6666653
No 398
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.59 E-value=0.093 Score=50.36 Aligned_cols=89 Identities=20% Similarity=0.143 Sum_probs=57.7
Q ss_pred ceeEEEEeCChhhHH-HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGRE-HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~-~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
..||.|||+|..|.. .+..|.+ .+.+|. ++|..... ..+++ ++.|+++ .+..-.+.+. ++|+|+++.--
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~---~G~~V~-~~D~~~~~--~~~~l-~~~gi~~-~~g~~~~~~~--~~d~vV~Spgi 91 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN---EGYQIS-GSDLAPNS--VTQHL-TALGAQI-YFHHRPENVL--DASVVVVSTAI 91 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH---TTCEEE-EECSSCCH--HHHHH-HHTTCEE-ESSCCGGGGT--TCSEEEECTTS
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh---CCCeEE-EEECCCCH--HHHHH-HHCCCEE-ECCCCHHHcC--CCCEEEECCCC
Confidence 358999999999986 4555555 488877 57876542 23333 3458762 1222223343 38998887654
Q ss_pred CccHHHHHHHHcCCCCCeEEEe
Q 017143 85 MTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~E 106 (376)
....+.+.+|.+ +|.+|+-|
T Consensus 92 ~~~~p~~~~a~~--~gi~v~~~ 111 (494)
T 4hv4_A 92 SADNPEIVAARE--ARIPVIRR 111 (494)
T ss_dssp CTTCHHHHHHHH--TTCCEEEH
T ss_pred CCCCHHHHHHHH--CCCCEEcH
Confidence 444566777888 89999976
No 399
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=94.54 E-value=0.097 Score=46.75 Aligned_cols=74 Identities=16% Similarity=0.033 Sum_probs=51.5
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhH-----HHHHHHHHhcCCCCCccCC-----HHHHhhCCCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSR-----QQALKLANAFDWPLKVFPG-----HQELLDSGLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~D 76 (376)
+||++.|++.++...+.+|... +.++++|+...+.+. ...+++|+++|+|+...++ +.+.|+..++|
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~---~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~D 77 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA---GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPD 77 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT---TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCS
T ss_pred CEEEEEEcCHHHHHHHHHHHHC---CCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCcCCcHHHHHHHHhcCCC
Confidence 5899999999888888887764 689999997533321 1267888899998322222 33555666799
Q ss_pred EEEEeCC
Q 017143 77 VVVVSTP 83 (376)
Q Consensus 77 ~V~i~t~ 83 (376)
+++++..
T Consensus 78 liv~~~y 84 (305)
T 2bln_A 78 VIFSFYY 84 (305)
T ss_dssp EEEEESC
T ss_pred EEEEecc
Confidence 9998875
No 400
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.50 E-value=0.14 Score=47.58 Aligned_cols=90 Identities=16% Similarity=0.118 Sum_probs=56.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCccC---CHHHHhh----CCCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVFP---GHQELLD----SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~----~~~~D~V 78 (376)
-+|.|+|+|.+|...+...+.. +. .++ ++++++++++ +++++|..+-.|+ ++.+.+. ...+|+|
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk~~---Ga~~Vi-~~~~~~~~~~----~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvv 258 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASARLL---GAAVVI-VGDLNPARLA----HAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCA 258 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEE-EEESCHHHHH----HHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHHC---CCCeEE-EEcCCHHHHH----HHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEE
Confidence 4799999999999877766654 66 455 4577777444 3445665411122 2333332 2358999
Q ss_pred EEeCCCCc---------------cHHHHHHHHcCCCCCeEEE
Q 017143 79 VVSTPNMT---------------HYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 79 ~i~t~~~~---------------h~~~~~~al~~~~g~~Vl~ 105 (376)
+-++.... ....+.++++.+ |+-|++
T Consensus 259 id~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~ 299 (398)
T 1kol_A 259 VDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIP 299 (398)
T ss_dssp EECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEEC
T ss_pred EECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEe
Confidence 99998652 467778888742 555554
No 401
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.48 E-value=0.12 Score=46.96 Aligned_cols=89 Identities=12% Similarity=0.147 Sum_probs=56.4
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhh----CCCCCEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLD----SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~----~~~~D~V 78 (376)
-+|.|+|+ |.+|...+..++.. +.+++++ ++++++++.++ ++|.+ .++ .++.+.+. ...+|+|
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~---Ga~Vi~~-~~~~~~~~~~~----~~ga~-~v~~~~~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGM---GAKVIAV-VNRTAATEFVK----SVGAD-IVLPLEEGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT---TCEEEEE-ESSGGGHHHHH----HHTCS-EEEESSTTHHHHHHHHTTTSCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCEEEEE-eCCHHHHHHHH----hcCCc-EEecCchhHHHHHHHHhCCCCceEE
Confidence 47999998 99999877776665 7788765 45666544444 44544 111 34444333 2258999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
+-++... ....+..+++.+ |+-|++-
T Consensus 232 id~~g~~-~~~~~~~~l~~~-G~iv~~G 257 (342)
T 4eye_A 232 VDPIGGP-AFDDAVRTLASE-GRLLVVG 257 (342)
T ss_dssp EESCC---CHHHHHHTEEEE-EEEEEC-
T ss_pred EECCchh-HHHHHHHhhcCC-CEEEEEE
Confidence 9998864 567777888743 6666654
No 402
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.46 E-value=0.12 Score=47.78 Aligned_cols=40 Identities=20% Similarity=0.385 Sum_probs=31.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQA 49 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~ 49 (376)
..+|+|+|+|.+|...+..++.+ +.+ |-++|+++++++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~---Ga~-V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL---GAV-VMATDVRAATKEQV 211 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCE-EEEECSCSTTHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCE-EEEEeCCHHHHHHH
Confidence 46899999999999988888776 677 55789998854443
No 403
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.40 E-value=0.03 Score=49.13 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=48.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcC--CCCCccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFD--WPLKVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
.-|+.|+|+|..++..+.+|... ++.-+.|++|+.+ ++++++++++ ++........+.+ .+.|+|+-+||
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~---g~~~i~i~nRt~~---ra~~la~~~~~~~~~~~~~~~~~~~--~~~dliiNaTp 196 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEA---GIASITLCDPSTA---RMGAVCELLGNGFPGLTVSTQFSGL--EDFDLVANASP 196 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCSEEEEECSCHH---HHHHHHHHHHHHCTTCEEESCCSCS--TTCSEEEECSS
T ss_pred cCeEEEEecHHHHHHHHHHHHHh---CCCeEEEeCCCHH---HHHHHHHHHhccCCcceehhhhhhh--hcccccccCCc
Confidence 35799999999999988888876 6655668999988 5555555432 1101111111122 34899999999
Q ss_pred CCc
Q 017143 84 NMT 86 (376)
Q Consensus 84 ~~~ 86 (376)
-.+
T Consensus 197 ~Gm 199 (269)
T 3tum_A 197 VGM 199 (269)
T ss_dssp TTC
T ss_pred ccc
Confidence 554
No 404
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.35 E-value=0.11 Score=46.84 Aligned_cols=90 Identities=12% Similarity=0.030 Sum_probs=58.2
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhh----CCCCCE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLD----SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~----~~~~D~ 77 (376)
-+|.|+| +|.+|...+..++.. +.+++++ ++++++++.+ +++|.+ ..+ .++.+.+. ...+|+
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~-~~~~~~~~~~----~~~Ga~-~~~~~~~~~~~~~~~~~~~~~g~Dv 212 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKAL---GAKLIGT-VSSPEKAAHA----KALGAW-ETIDYSHEDVAKRVLELTDGKKCPV 212 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHH---TCEEEEE-ESSHHHHHHH----HHHTCS-EEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC---CCEEEEE-eCCHHHHHHH----HHcCCC-EEEeCCCccHHHHHHHHhCCCCceE
Confidence 4789999 799999887777765 6787765 5666654433 345543 121 23333322 235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEec
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEK 107 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EK 107 (376)
|+-++.. .....+..+++.+ |+-|++--
T Consensus 213 vid~~g~-~~~~~~~~~l~~~-G~iv~~g~ 240 (325)
T 3jyn_A 213 VYDGVGQ-DTWLTSLDSVAPR-GLVVSFGN 240 (325)
T ss_dssp EEESSCG-GGHHHHHTTEEEE-EEEEECCC
T ss_pred EEECCCh-HHHHHHHHHhcCC-CEEEEEec
Confidence 9998886 5677778888743 66666643
No 405
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.34 E-value=0.21 Score=45.06 Aligned_cols=88 Identities=10% Similarity=0.040 Sum_probs=57.7
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhh----CCCCCE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLD----SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~----~~~~D~ 77 (376)
-+|.|+| +|.+|...+..++.. +.+++++ ++++++++ +++++|.+ .++ .++.+.+. ...+|+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~---Ga~Vi~~-~~~~~~~~----~~~~~ga~-~~~~~~~~~~~~~~~~~~~~~g~D~ 220 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMK---GAHTIAV-ASTDEKLK----IAKEYGAE-YLINASKEDILRQVLKFTNGKGVDA 220 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT---TCEEEEE-ESSHHHHH----HHHHTTCS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC---CCEEEEE-eCCHHHHH----HHHHcCCc-EEEeCCCchHHHHHHHHhCCCCceE
Confidence 4799999 799999877766664 7788765 56666433 44556654 221 23333322 235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEE
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~ 105 (376)
|+-++.. .....+..+++.+ |+-|++
T Consensus 221 vid~~g~-~~~~~~~~~l~~~-G~iv~~ 246 (334)
T 3qwb_A 221 SFDSVGK-DTFEISLAALKRK-GVFVSF 246 (334)
T ss_dssp EEECCGG-GGHHHHHHHEEEE-EEEEEC
T ss_pred EEECCCh-HHHHHHHHHhccC-CEEEEE
Confidence 9999886 6677788888743 665665
No 406
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=94.29 E-value=0.071 Score=48.61 Aligned_cols=87 Identities=6% Similarity=0.012 Sum_probs=54.7
Q ss_pred EEEE--eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhhC----CCCCEE
Q 017143 9 YGII--GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLDS----GLCDVV 78 (376)
Q Consensus 9 v~ii--G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~----~~~D~V 78 (376)
..+| |+|.+|...+..++.. +.+++++ ++++++++.++ ++|.+ .+ + .++.+.+.+ ..+|+|
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~---Ga~Vi~~-~~~~~~~~~~~----~~Ga~-~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEE---GFRPIVT-VRRDEQIALLK----DIGAA-HVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHH---TCEEEEE-ESCGGGHHHHH----HHTCS-EEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHC---CCEEEEE-eCCHHHHHHHH----HcCCC-EEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 4555 8999999887777665 6788765 56666554444 45544 12 1 234333322 359999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
+-++.... ...+.++++. .|+-|++-
T Consensus 238 id~~g~~~-~~~~~~~l~~-~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVTGPL-ASAIFNAMPK-RARWIIYG 263 (349)
T ss_dssp EESSCHHH-HHHHHHHSCT-TCEEEECC
T ss_pred EECCCChh-HHHHHhhhcC-CCEEEEEe
Confidence 99887543 4667788875 36666663
No 407
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=94.28 E-value=0.51 Score=42.60 Aligned_cols=141 Identities=13% Similarity=0.062 Sum_probs=83.4
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhc--------------------CCCcEEEEEeCCChhhHHHHHHHH--HhcCC----
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLR--------------------SQGVSVVCIADPHLQSRQQALKLA--NAFDW---- 58 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~--------------------~~~~~~~~v~d~~~~~~~~~~~~~--~~~~~---- 58 (376)
.++||||||.|+.|...+..+...+ ..++++++.+|.|+.+..+.-.-+ .+.+.
T Consensus 14 ~~~rVaIVGvGN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~~~~ 93 (367)
T 1gr0_A 14 TEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTIKI 93 (367)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCCCCC
T ss_pred cCCCEEEECcChHHHHHHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCchhhh
Confidence 4799999999999987766443331 248899999999998653221111 11121
Q ss_pred ---C----------------------C----CccCCHHHHhhCCCCCEEEEeCCCCcc---HHHHHHHHcCCCCCeEEEe
Q 017143 59 ---P----------------------L----KVFPGHQELLDSGLCDVVVVSTPNMTH---YQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 59 ---~----------------------~----~~~~~~~~~l~~~~~D~V~i~t~~~~h---~~~~~~al~~~~g~~Vl~E 106 (376)
+ + ..-.|+.+++++..+|+|+...|.... .-+|..||+ +|.+-.-=
T Consensus 94 ~~v~~~~v~v~~g~~ldgia~~~~~~i~~s~~~~~Di~~~~~~~~~dVvV~~lp~gs~~aS~~YA~Aal~--ag~~fvN~ 171 (367)
T 1gr0_A 94 ADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAID--AGVAFVNA 171 (367)
T ss_dssp SCCCCCCCBCEECCCTTSCCHHHHTTSCBCSSCCCCHHHHHHHTTCSEEEECCCTTCHHHHHHHHHHHHH--HTCEEEEC
T ss_pred hcccccCceEccCCCCCchhhhhhhccccccchhhHHHHHHHHhCCcEEEEeeeCCCcCHHHHHHHHHHH--cCCceEec
Confidence 0 0 012257778887889966666665432 223567888 77888777
Q ss_pred cCCCCC-HHHHHHHHHHHHhCCCeEEEEeeccc--c--CHHHHHHHHHHHc
Q 017143 107 KPLCTT-VADCKKVVDAARKRPDILVQVGLEYR--Y--MPPVAKLIQIVKS 152 (376)
Q Consensus 107 KP~a~~-~~e~~~l~~~a~~~~~~~~~v~~~~r--~--~p~~~~~k~~i~~ 152 (376)
-|...- ..+ +.+++++ .|++ ..|-... . ...-..+-+++.+
T Consensus 172 ~P~~~~~~P~---~~el~~~-~g~p-i~GdD~Ksq~G~T~~k~~La~~l~~ 217 (367)
T 1gr0_A 172 LPVFIASDPV---WAKKFTD-ARVP-IVGDDIKSQVGATITHRVLAKLFED 217 (367)
T ss_dssp SSCCSTTSHH---HHHHHHH-HTCE-EEESSBCCSSCHHHHHHHHHHHHHH
T ss_pred CCccccCCHH---HHHHHHH-cCCC-EeccccccccCCChHHHHHHHHHHH
Confidence 775432 344 5566633 3655 4555555 2 2233344455544
No 408
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.28 E-value=0.093 Score=47.79 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=78.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhh----CCCCCE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLD----SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~----~~~~D~ 77 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++.+ +++|.+ .+ + .++.+.+. ...+|+
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~-~~~~~~~~~~~----~~~Ga~-~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKAS---GAYPVIV-SEPSDFRRELA----KKVGAD-YVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCSEEE-ECSCHHHHHHH----HHHTCS-EEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEE-ECCCHHHHHHH----HHhCCC-EEECCCCcCHHHHHHHHcCCCCCCE
Confidence 3799999999999887766665 66 7665 56777644433 355644 22 1 24443332 235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEe---cCCCCCHHHHHHHHHHHHhCCCeEEEEeecccc-CHHHHHHHHHHHcC
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVE---KPLCTTVADCKKVVDAARKRPDILVQVGLEYRY-MPPVAKLIQIVKSG 153 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~E---KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~-~p~~~~~k~~i~~g 153 (376)
|+.++........+.++++. .|+-|++- .+...+.. .... .+ ++.+ .+...+. ...+..+.+++++|
T Consensus 240 vid~~g~~~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~~-----~~~~-~~-~~~i-~g~~~~~~~~~~~~~~~l~~~g 310 (348)
T 2d8a_A 240 FLEFSGAPKALEQGLQAVTP-AGRVSLLGLYPGKVTIDFN-----NLII-FK-ALTI-YGITGRHLWETWYTVSRLLQSG 310 (348)
T ss_dssp EEECSCCHHHHHHHHHHEEE-EEEEEECCCCSSCCCCCHH-----HHTT-TT-TCEE-EECCCCCSHHHHHHHHHHHHHT
T ss_pred EEECCCCHHHHHHHHHHHhc-CCEEEEEccCCCCcccCch-----HHHH-hC-CcEE-EEecCCCcHHHHHHHHHHHHcC
Confidence 99999876667777888873 25555543 23333320 1222 22 4444 3433333 45678888999988
Q ss_pred CC
Q 017143 154 SI 155 (376)
Q Consensus 154 ~i 155 (376)
++
T Consensus 311 ~i 312 (348)
T 2d8a_A 311 KL 312 (348)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 409
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=94.24 E-value=0.16 Score=42.60 Aligned_cols=87 Identities=13% Similarity=0.129 Sum_probs=51.1
Q ss_pred ceeEEEEeCChhhHH---HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHHh
Q 017143 6 TVKYGIIGMGMMGRE---HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQELL 70 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~---~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~l 70 (376)
|+||+|...|. |.. .+.+.+.. .-..++++|+...++. ...+.|+++|+|+.. |.+ +.+.|
T Consensus 2 m~riavl~Sg~-Gsnl~ali~~~~~~-~l~~eI~~Visn~~~a--~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l 77 (211)
T 3p9x_A 2 MKRVAIFASGS-GTNAEAIIQSQKAG-QLPCEVALLITDKPGA--KVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQL 77 (211)
T ss_dssp -CEEEEECCTT-CHHHHHHHHHHHTT-CCSSEEEEEEESCSSS--HHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHH
T ss_pred CCEEEEEEeCC-chHHHHHHHHHHcC-CCCcEEEEEEECCCCc--HHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHH
Confidence 47899998885 432 22222221 1246888888654432 567889999998322 222 23445
Q ss_pred hCCCCCEEEEeCCCCccHHHHHHHHc
Q 017143 71 DSGLCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
+..++|+++++.-...=.+-++...+
T Consensus 78 ~~~~~Dliv~agy~~Il~~~~l~~~~ 103 (211)
T 3p9x_A 78 KEKQIDFVVLAGYMRLVGPTLLGAYE 103 (211)
T ss_dssp HHTTCCEEEESSCCSCCCHHHHHHHT
T ss_pred HhcCCCEEEEeCchhhcCHHHHhhcc
Confidence 56679999998865443344444444
No 410
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.22 E-value=0.1 Score=48.02 Aligned_cols=136 Identities=15% Similarity=0.214 Sum_probs=77.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--cCCHHHHhhC--CCCCEEEEeC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--FPGHQELLDS--GLCDVVVVST 82 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~--~~~D~V~i~t 82 (376)
-+|.|+|+|.+|...+..++.. +.++++ +++++++++.++ ++|.+ .+ +.+- +.++. ..+|+|+.++
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~---Ga~Vi~-~~~~~~~~~~a~----~lGa~-~vi~~~~~-~~~~~~~~g~Dvvid~~ 265 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM---GAHVVA-FTTSEAKREAAK----ALGAD-EVVNSRNA-DEMAAHLKSFDFILNTV 265 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEE-EESSGGGHHHHH----HHTCS-EEEETTCH-HHHHTTTTCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC---CCEEEE-EeCCHHHHHHHH----HcCCc-EEeccccH-HHHHHhhcCCCEEEECC
Confidence 4799999999998877666554 778665 556776544443 45654 22 2332 22221 3589999999
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCCCce
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSIGQV 158 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 158 (376)
......+.+.++++. .|+-|++--+-. .... ..+.... .+ ++.+. +........+..+.+++++|++-..
T Consensus 266 g~~~~~~~~~~~l~~-~G~iv~~G~~~~-~~~~-~~~~~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~i~~~ 335 (369)
T 1uuf_A 266 AAPHNLDDFTTLLKR-DGTMTLVGAPAT-PHKS-PEVFNLI-MK-RRAIA-GSMIGGIPETQEMLDFCAEHGIVAD 335 (369)
T ss_dssp SSCCCHHHHHTTEEE-EEEEEECCCC---------CHHHHH-TT-TCEEE-ECCSCCHHHHHHHHHHHHHHTCCCC
T ss_pred CCHHHHHHHHHHhcc-CCEEEEeccCCC-Cccc-cCHHHHH-hC-CcEEE-EeecCCHHHHHHHHHHHHhCCCCcc
Confidence 877677788888874 255555433211 0001 1122233 33 44443 3222222456777888888877543
No 411
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.19 E-value=0.12 Score=47.47 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=34.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALK 51 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~ 51 (376)
..||+|||+|.+|...+..+..+ +.+|+ ++|+++++++.+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l---Ga~V~-v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL---GAKTT-GYDVRPEVAEQVRS 225 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH---TCEEE-EECSSGGGHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC---CCEEE-EEeCCHHHHHHHHH
Confidence 46999999999999988888887 67755 79999986555544
No 412
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.16 E-value=0.099 Score=44.58 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=26.7
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP 41 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~ 41 (376)
.++||+|||+|.||......|.+. +.+|++ +++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~---G~~V~~-~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV---GHYVTV-LHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT---TCEEEE-CSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC---CCEEEE-ecC
Confidence 357999999999999888888875 778775 454
No 413
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=94.15 E-value=0.12 Score=47.32 Aligned_cols=132 Identities=12% Similarity=0.092 Sum_probs=76.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc--CC-HHHHhh----CCCCCEEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF--PG-HQELLD----SGLCDVVV 79 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~l~----~~~~D~V~ 79 (376)
-+|.|+|+|.+|...+...+.. .+.++++ .++++++++ +++++|.+ .++ ++ +.+.+. ...+|+|+
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~--~Ga~Vi~-~~~~~~~~~----~~~~lGa~-~vi~~~~~~~~~v~~~~~g~g~Dvvi 259 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVM--TPATVIA-LDVKEEKLK----LAERLGAD-HVVDARRDPVKQVMELTRGRGVNVAM 259 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CCCEEEE-EESSHHHHH----HHHHTTCS-EEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCeEEE-EeCCHHHHH----HHHHhCCC-EEEeccchHHHHHHHHhCCCCCcEEE
Confidence 4799999999998877666554 3778775 456666433 34466754 222 22 222222 12589999
Q ss_pred EeCCCCc--cHHHHHHHHcCCCCCeEEEecCC--CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 80 VSTPNMT--HYQILMDIINHPKPHHVLVEKPL--CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 80 i~t~~~~--h~~~~~~al~~~~g~~Vl~EKP~--a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
-++.... ..+.+.++ . .|+-|++--+. ..+.. ... .+ ++.+. +........+..+.+++++|++
T Consensus 260 d~~G~~~~~~~~~~~~~-~--~G~~v~~g~~~~~~~~~~------~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~l 327 (359)
T 1h2b_A 260 DFVGSQATVDYTPYLLG-R--MGRLIIVGYGGELRFPTI------RVI-SS-EVSFE-GSLVGNYVELHELVTLALQGKV 327 (359)
T ss_dssp ESSCCHHHHHHGGGGEE-E--EEEEEECCCSSCCCCCHH------HHH-HT-TCEEE-ECCSCCHHHHHHHHHHHHTTSC
T ss_pred ECCCCchHHHHHHHhhc-C--CCEEEEEeCCCCCCCCHH------HHH-hC-CcEEE-EecCCCHHHHHHHHHHHHcCCC
Confidence 9998654 44444555 5 57667664332 22222 233 23 44443 3222223457788888888887
Q ss_pred Cce
Q 017143 156 GQV 158 (376)
Q Consensus 156 G~i 158 (376)
-.+
T Consensus 328 ~~~ 330 (359)
T 1h2b_A 328 RVE 330 (359)
T ss_dssp CCC
T ss_pred cce
Confidence 543
No 414
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=94.09 E-value=0.23 Score=45.75 Aligned_cols=87 Identities=10% Similarity=0.175 Sum_probs=65.7
Q ss_pred hhHHHHHHHHHhcCCC--CCccC--CHHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHH
Q 017143 44 QSRQQALKLANAFDWP--LKVFP--GHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKV 119 (376)
Q Consensus 44 ~~~~~~~~~~~~~~~~--~~~~~--~~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l 119 (376)
+......+.++++|++ ...++ +. +++.+. +|++-|++.+-...++..++-+ .||+|++-+++..+++|....
T Consensus 193 egl~~L~~~~~~~Gl~~~te~~d~~~~-~~l~~~-vd~lkIgs~~~~n~~LL~~~a~--~gkPVilk~G~~~t~~e~~~A 268 (385)
T 3nvt_A 193 EGLKILKRVSDEYGLGVISEIVTPADI-EVALDY-VDVIQIGARNMQNFELLKAAGR--VDKPILLKRGLSATIEEFIGA 268 (385)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSGGGH-HHHTTT-CSEEEECGGGTTCHHHHHHHHT--SSSCEEEECCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEecCCHHHH-HHHHhh-CCEEEECcccccCHHHHHHHHc--cCCcEEEecCCCCCHHHHHHH
Confidence 4445667788889998 23333 33 444454 9999999999999999999999 899999999999999999888
Q ss_pred HHHHHhCCCeEEEEe
Q 017143 120 VDAARKRPDILVQVG 134 (376)
Q Consensus 120 ~~~a~~~~~~~~~v~ 134 (376)
++.....++-.+.+.
T Consensus 269 ve~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 269 AEYIMSQGNGKIILC 283 (385)
T ss_dssp HHHHHTTTCCCEEEE
T ss_pred HHHHHHcCCCeEEEE
Confidence 888754433333333
No 415
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.07 E-value=0.17 Score=45.97 Aligned_cols=132 Identities=11% Similarity=0.113 Sum_probs=79.2
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhh----CCCCCE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLD----SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~----~~~~D~ 77 (376)
-+|.|+|+ |.+|...+..++.. +.++++ +++++++++.++ ++|.. .. + .++.+.+. ...+|+
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~---G~~Vi~-~~~~~~~~~~~~----~~ga~-~~~d~~~~~~~~~~~~~~~~~~~d~ 238 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLF---GARVIA-TAGSEDKLRRAK----ALGAD-ETVNYTHPDWPKEVRRLTGGKGADK 238 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHT---TCEEEE-EESSHHHHHHHH----HHTCS-EEEETTSTTHHHHHHHHTTTTCEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHC---CCEEEE-EeCCHHHHHHHH----hcCCC-EEEcCCcccHHHHHHHHhCCCCceE
Confidence 57999998 89999877776665 678776 467776544443 34543 11 1 23333332 235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEecCC----CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcC
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEKPL----CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSG 153 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~----a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g 153 (376)
|+.++. ......+.++++. .|+-|++--+. ..+. .... .+ ++.+ .+........+..+.+++++|
T Consensus 239 vi~~~g-~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~------~~~~-~~-~~~~-~g~~~~~~~~~~~~~~l~~~g 307 (343)
T 2eih_A 239 VVDHTG-ALYFEGVIKATAN-GGRIAIAGASSGYEGTLPF------AHVF-YR-QLSI-LGSTMASKSRLFPILRFVEEG 307 (343)
T ss_dssp EEESSC-SSSHHHHHHHEEE-EEEEEESSCCCSCCCCCCT------THHH-HT-TCEE-EECCSCCGGGHHHHHHHHHHT
T ss_pred EEECCC-HHHHHHHHHhhcc-CCEEEEEecCCCCcCccCH------HHHH-hC-CcEE-EEecCccHHHHHHHHHHHHcC
Confidence 999998 6667788888874 36656554322 1222 1222 22 4443 343333345678888999988
Q ss_pred CCCce
Q 017143 154 SIGQV 158 (376)
Q Consensus 154 ~iG~i 158 (376)
++-.+
T Consensus 308 ~l~~~ 312 (343)
T 2eih_A 308 KLKPV 312 (343)
T ss_dssp SSCCC
T ss_pred CCCCc
Confidence 87543
No 416
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.05 E-value=0.19 Score=45.92 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=28.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL 43 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~ 43 (376)
.-||.|||+|..|...+..|... ++.-+.++|.|.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a---Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS---GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH---TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC---CCCeEEEECCCc
Confidence 46899999999999988888886 666666888764
No 417
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.01 E-value=0.21 Score=45.30 Aligned_cols=76 Identities=12% Similarity=0.155 Sum_probs=47.1
Q ss_pred CCCceeEEEEeC-ChhhHHHHHHhhhhcCCCc-----EEEEEeCCChhhHHHHHHHHH---hcCCC----CCccCCHHHH
Q 017143 3 ANDTVKYGIIGM-GMMGREHFINLHHLRSQGV-----SVVCIADPHLQSRQQALKLAN---AFDWP----LKVFPGHQEL 69 (376)
Q Consensus 3 ~~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~-----~~~~v~d~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~ 69 (376)
+|+++||+|+|+ |.+|...+..++.. +-+ .-+.++|..+... +++-++. ...++ +...++..+.
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~--~l~~~~~~~eL~L~Di~~~~~-~~~Gva~DL~~~~~~~~~~~~~~~~~~~a 97 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARG--ALLGPTTPVELRLLDIEPALK-ALAGVEAELEDCAFPLLDKVVVTADPRVA 97 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHT--TTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHHTTCTTEEEEEEESCHHHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhc--cccCCCCccEEEEECCCCccc-cchhhhhhhhhcCccCCCcEEEcCChHHH
Confidence 456799999996 99999877766654 222 2355889876421 2222221 11222 2345677777
Q ss_pred hhCCCCCEEEEeCC
Q 017143 70 LDSGLCDVVVVSTP 83 (376)
Q Consensus 70 l~~~~~D~V~i~t~ 83 (376)
+++ .|+|+|+.-
T Consensus 98 ~~~--advVvi~aG 109 (345)
T 4h7p_A 98 FDG--VAIAIMCGA 109 (345)
T ss_dssp TTT--CSEEEECCC
T ss_pred hCC--CCEEEECCC
Confidence 776 899999874
No 418
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.99 E-value=0.12 Score=46.93 Aligned_cols=133 Identities=11% Similarity=0.091 Sum_probs=75.7
Q ss_pred eeEEEEeCC-hhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCH----HHHhhCCCCCE
Q 017143 7 VKYGIIGMG-MMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGH----QELLDSGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~G-~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~----~~~l~~~~~D~ 77 (376)
-+|.|+|+| .+|...+..++.. .+.++++ +++++++++.++ ++|.+ .. + .++ .++.....+|+
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~--~Ga~Vi~-~~~~~~~~~~~~----~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 243 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAV--SGATIIG-VDVREEAVEAAK----RAGAD-YVINASMQDPLAEIRRITESKGVDA 243 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCCEEEE-EESSHHHHHHHH----HHTCS-EEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred CEEEEECCCccHHHHHHHHHHHc--CCCeEEE-EcCCHHHHHHHH----HhCCC-EEecCCCccHHHHHHHHhcCCCceE
Confidence 479999998 8998877766654 3778664 567776544443 44543 11 1 122 22222135899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEecCC---CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCC
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEKPL---CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGS 154 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~---a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~ 154 (376)
|+-++......+.+.++++. .|+-|++--+- ..+.. ... .+ ++.+. +........+..+.+++++|+
T Consensus 244 vi~~~g~~~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~~------~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~ 313 (347)
T 1jvb_A 244 VIDLNNSEKTLSVYPKALAK-QGKYVMVGLFGADLHYHAP------LIT-LS-EIQFV-GSLVGNQSDFLGIMRLAEAGK 313 (347)
T ss_dssp EEESCCCHHHHTTGGGGEEE-EEEEEECCSSCCCCCCCHH------HHH-HH-TCEEE-ECCSCCHHHHHHHHHHHHTTS
T ss_pred EEECCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCHH------HHH-hC-ceEEE-EEeccCHHHHHHHHHHHHcCC
Confidence 99998876556666677763 25555553222 33332 222 12 33333 322222346778888888888
Q ss_pred CCc
Q 017143 155 IGQ 157 (376)
Q Consensus 155 iG~ 157 (376)
+-.
T Consensus 314 l~~ 316 (347)
T 1jvb_A 314 VKP 316 (347)
T ss_dssp SCC
T ss_pred CCc
Confidence 743
No 419
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.96 E-value=0.33 Score=44.57 Aligned_cols=140 Identities=13% Similarity=0.103 Sum_probs=75.3
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHh-hCCCCCEEEE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELL-DSGLCDVVVV 80 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l-~~~~~D~V~i 80 (376)
-+|.|+| +|.+|...+..++.. +.++++++ ++++++ +++++|.+ .++ .++.+.+ +...+|+|+-
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~---Ga~Vi~~~--~~~~~~----~~~~lGa~-~v~~~~~~~~~~~~~~~~g~D~vid 254 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAW---DAHVTAVC--SQDASE----LVRKLGAD-DVIDYKSGSVEEQLKSLKPFDFILD 254 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEEE--CGGGHH----HHHHTTCS-EEEETTSSCHHHHHHTSCCBSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC---CCEEEEEe--ChHHHH----HHHHcCCC-EEEECCchHHHHHHhhcCCCCEEEE
Confidence 4799999 799999877666654 67888776 344333 34566755 222 2343333 3346899999
Q ss_pred eCCCC-ccHHHHHHHHcCCCCCeEEEecCCCCCHHH----H------HHHHHH-H-H-hCCCeEEEEeeccccCHHHHHH
Q 017143 81 STPNM-THYQILMDIINHPKPHHVLVEKPLCTTVAD----C------KKVVDA-A-R-KRPDILVQVGLEYRYMPPVAKL 146 (376)
Q Consensus 81 ~t~~~-~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e----~------~~l~~~-a-~-~~~~~~~~v~~~~r~~p~~~~~ 146 (376)
++... .-...+.++++. .|+-|++--+...+... . ..+... . . .. +..+...+.......+..+
T Consensus 255 ~~g~~~~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 332 (375)
T 2vn8_A 255 NVGGSTETWAPDFLKKWS-GATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWK-GVHYRWAFFMASGPCLDDI 332 (375)
T ss_dssp SSCTTHHHHGGGGBCSSS-CCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEEEECCCCCCHHHHHHH
T ss_pred CCCChhhhhHHHHHhhcC-CcEEEEeCCCcccccccccccchhheeehhhcccccccccc-CcceEEEEeCCCHHHHHHH
Confidence 99865 333445555663 36555554322100100 0 011111 0 0 02 4443322222122346888
Q ss_pred HHHHHcCCCCce
Q 017143 147 IQIVKSGSIGQV 158 (376)
Q Consensus 147 k~~i~~g~iG~i 158 (376)
.+++++|.|-.+
T Consensus 333 ~~l~~~g~l~~~ 344 (375)
T 2vn8_A 333 AELVDAGKIRPV 344 (375)
T ss_dssp HHHHHTTSCCCC
T ss_pred HHHHHCCCcccC
Confidence 899999888543
No 420
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=93.93 E-value=0.31 Score=44.35 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=29.2
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL 43 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~ 43 (376)
.-+|.|||+|..|...+..|... ++.-+.++|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~---Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA---GVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH---TCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc---CCCEEEEEECCC
Confidence 46899999999999999998886 676666888765
No 421
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.92 E-value=0.18 Score=46.98 Aligned_cols=40 Identities=25% Similarity=0.309 Sum_probs=31.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQA 49 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~ 49 (376)
..+|+|||+|.+|...+..++.+ +.+ +-++|+++++++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~---Ga~-V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL---GAI-VRAFDTRPEVKEQV 211 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCE-EEEECSCGGGHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCE-EEEEcCCHHHHHHH
Confidence 46899999999999988888876 566 45789998865444
No 422
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.88 E-value=0.23 Score=46.03 Aligned_cols=42 Identities=21% Similarity=0.343 Sum_probs=33.6
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHH
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALK 51 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~ 51 (376)
..||+|||+|.+|...+..+..+ +.+|+ ++|+++++++.+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l---Ga~V~-v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL---GAVVS-ATDVRPAAKEQVAS 231 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT---TCEEE-EECSSTTHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC---CCEEE-EEcCCHHHHHHHHH
Confidence 57999999999999988888876 67755 79999986554443
No 423
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.79 E-value=0.34 Score=41.06 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=47.3
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC-C---CCccCCHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW-P---LKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~l~~~~~D~V~ 79 (376)
+.++|.|.|+ |++|...+..|.+. +.+|++ ++|++++. .++.. .++ . ....+++.+++.. +|+|+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~---G~~V~~-~~R~~~~~---~~~~~-~~~~~~~~~Dl~~~~~~~~~~--~D~vi 89 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK---GHEPVA-MVRNEEQG---PELRE-RGASDIVVANLEEDFSHAFAS--IDAVV 89 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT---TCEEEE-EESSGGGH---HHHHH-TTCSEEEECCTTSCCGGGGTT--CSEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC---CCeEEE-EECChHHH---HHHHh-CCCceEEEcccHHHHHHHHcC--CCEEE
Confidence 4579999996 99999999888875 778775 46777743 33332 133 1 0122566677764 99999
Q ss_pred EeCCCC
Q 017143 80 VSTPNM 85 (376)
Q Consensus 80 i~t~~~ 85 (376)
.+....
T Consensus 90 ~~ag~~ 95 (236)
T 3e8x_A 90 FAAGSG 95 (236)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 887643
No 424
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.77 E-value=0.11 Score=50.30 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=57.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNM 85 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~ 85 (376)
..+|-+||.|.+|..-+..+... .+.+|. ++|...... ..+++. +.|+++..-.+.+.+.. ++|+|+++.--.
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~--~G~~V~-~sD~~~~~~-~~~~L~-~~gi~~~~G~~~~~~~~--~~d~vV~Spgi~ 91 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARA--LGHTVT-GSDANIYPP-MSTQLE-QAGVTIEEGYLIAHLQP--APDLVVVGNAMK 91 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH--TTCEEE-EEESCCCTT-HHHHHH-HTTCEEEESCCGGGGCS--CCSEEEECTTCC
T ss_pred CCEEEEEEecHhhHHHHHHHHHh--CCCEEE-EECCCCCcH-HHHHHH-HCCCEEECCCCHHHcCC--CCCEEEECCCcC
Confidence 46899999999998755554444 588866 578754211 223333 45776211123344433 389888875544
Q ss_pred ccHHHHHHHHcCCCCCeEEEe
Q 017143 86 THYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 86 ~h~~~~~~al~~~~g~~Vl~E 106 (376)
...+.+.+|.+ +|++|+-|
T Consensus 92 ~~~p~l~~a~~--~gi~v~~~ 110 (524)
T 3hn7_A 92 RGMDVIEYMLD--TGLRYTSG 110 (524)
T ss_dssp TTSHHHHHHHH--HTCCEEEH
T ss_pred CCCHHHHHHHH--CCCcEEEH
Confidence 44455678888 89999987
No 425
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=93.75 E-value=0.3 Score=41.68 Aligned_cols=95 Identities=12% Similarity=0.023 Sum_probs=55.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--C-CccCCHHHHh-hCCCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--L-KVFPGHQELL-DSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~l-~~~~~D~V~i~ 81 (376)
.-+|..+|+| .|...... ++. ..++++ +|.+++..+.+++..+.+++. + -...++.+.+ ....+|+|+..
T Consensus 92 ~~~vldiG~G-~G~~~~~l-~~~---~~~v~~-vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 165 (248)
T 2yvl_A 92 EKRVLEFGTG-SGALLAVL-SEV---AGEVWT-FEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD 165 (248)
T ss_dssp TCEEEEECCT-TSHHHHHH-HHH---SSEEEE-ECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC
T ss_pred CCEEEEeCCC-ccHHHHHH-HHh---CCEEEE-EecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC
Confidence 3589999999 56644333 222 456664 699998877777766666652 1 1224554544 44468999886
Q ss_pred CCCC-ccHHHHHHHHcCCCCCeEEEecC
Q 017143 82 TPNM-THYQILMDIINHPKPHHVLVEKP 108 (376)
Q Consensus 82 t~~~-~h~~~~~~al~~~~g~~Vl~EKP 108 (376)
.|.. .-.+.+.+.|+ .|-.+++.-|
T Consensus 166 ~~~~~~~l~~~~~~L~--~gG~l~~~~~ 191 (248)
T 2yvl_A 166 VREPWHYLEKVHKSLM--EGAPVGFLLP 191 (248)
T ss_dssp SSCGGGGHHHHHHHBC--TTCEEEEEES
T ss_pred CcCHHHHHHHHHHHcC--CCCEEEEEeC
Confidence 6543 33444455555 3334444433
No 426
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.74 E-value=0.044 Score=46.36 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=60.8
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHh---cCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANA---FDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+++|.|.| +|++|...+..|.+. +.+|++ .++++++. ..+... ...++.-.++++++++. +|+|+.+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~---g~~V~~-~~r~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~~ 74 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR---GFEVTA-VVRHPEKI---KIENEHLKVKKADVSSLDEVCEVCKG--ADAVISA 74 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT---TCEEEE-ECSCGGGC---CCCCTTEEEECCCTTCHHHHHHHHTT--CSEEEEC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC---CCEEEE-EEcCcccc---hhccCceEEEEecCCCHHHHHHHhcC--CCEEEEe
Confidence 47899999 589999998888875 678775 56776632 111111 11111122345566764 8999988
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCe--EEEEe
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDI--LVQVG 134 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~--~~~v~ 134 (376)
..... . . . ..+..+......+++++++. ++ .++++
T Consensus 75 a~~~~---------~--~-~-----~~~~~n~~~~~~l~~~~~~~-~~~~~v~~S 111 (227)
T 3dhn_A 75 FNPGW---------N--N-P-----DIYDETIKVYLTIIDGVKKA-GVNRFLMVG 111 (227)
T ss_dssp CCC-----------------------CCSHHHHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred CcCCC---------C--C-h-----hHHHHHHHHHHHHHHHHHHh-CCCEEEEeC
Confidence 75431 1 0 0 13445777888899998554 43 44444
No 427
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=93.73 E-value=0.037 Score=50.17 Aligned_cols=88 Identities=20% Similarity=0.273 Sum_probs=55.5
Q ss_pred eeEEEEe-CChhhHHHHHHhh--hhcCCCcEEEEEeCCChhhHHHHHHHHHhc-CCCCCccC-CHHHHhhCCCCCEEEEe
Q 017143 7 VKYGIIG-MGMMGREHFINLH--HLRSQGVSVVCIADPHLQSRQQALKLANAF-DWPLKVFP-GHQELLDSGLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~--~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~l~~~~~D~V~i~ 81 (376)
+||+|+| +|.+|+..++.+. .+ +.++++.+.++... .+.+. + +.++.+++ +.++ + ++|+|+.|
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~--~~~~l~~~~s~~~~----g~~l~--~~g~~i~v~~~~~~~-~---~~DvV~~a 68 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNF--PLSELRLYASPRSA----GVRLA--FRGEEIPVEPLPEGP-L---PVDLVLAS 68 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC--CCSCCEEEECGGGS----SCEEE--ETTEEEEEEECCSSC-C---CCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CcEEEEEeeccccC----CCEEE--EcCceEEEEeCChhh-c---CCCEEEEC
Confidence 5899999 8999999988887 44 67777655543211 00000 0 10111211 2222 2 58999999
Q ss_pred CCCCccHHHHHHHHcCCCCCeEEEecCC
Q 017143 82 TPNMTHYQILMDIINHPKPHHVLVEKPL 109 (376)
Q Consensus 82 t~~~~h~~~~~~al~~~~g~~Vl~EKP~ 109 (376)
+|.....+.+..+++ +|. +.+.-+.
T Consensus 69 ~g~~~s~~~a~~~~~--~G~-~vId~s~ 93 (331)
T 2yv3_A 69 AGGGISRAKALVWAE--GGA-LVVDNSS 93 (331)
T ss_dssp SHHHHHHHHHHHHHH--TTC-EEEECSS
T ss_pred CCccchHHHHHHHHH--CCC-EEEECCC
Confidence 999999999999999 676 4444443
No 428
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.70 E-value=0.43 Score=39.96 Aligned_cols=69 Identities=12% Similarity=0.078 Sum_probs=42.6
Q ss_pred eEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChh-hHHHHHHHHH-hcCC-----CCCccCCHHHHhhCCCCCEEE
Q 017143 8 KYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQ-SRQQALKLAN-AFDW-----PLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 8 ~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~-~~~~~~~~~~-~~~~-----~~~~~~~~~~~l~~~~~D~V~ 79 (376)
+|.|.| +|.+|+..+..|.+. .+.+|++ ++++++ +. ++++. ..++ ++.-.++++++++. +|+|+
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~--~g~~V~~-~~r~~~~~~---~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~d~vv 78 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTY--TDMHITL-YGRQLKTRI---PPEIIDHERVTVIEGSFQNPGXLEQAVTN--AEVVF 78 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHH--CCCEEEE-EESSHHHHS---CHHHHTSTTEEEEECCTTCHHHHHHHHTT--CSEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhc--CCceEEE-EecCccccc---hhhccCCCceEEEECCCCCHHHHHHHHcC--CCEEE
Confidence 399999 599999999888833 5888876 467665 32 23321 1111 11112345566654 89999
Q ss_pred EeCCC
Q 017143 80 VSTPN 84 (376)
Q Consensus 80 i~t~~ 84 (376)
.+...
T Consensus 79 ~~ag~ 83 (221)
T 3r6d_A 79 VGAME 83 (221)
T ss_dssp ESCCC
T ss_pred EcCCC
Confidence 88764
No 429
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=93.69 E-value=0.29 Score=43.12 Aligned_cols=82 Identities=13% Similarity=0.157 Sum_probs=63.0
Q ss_pred hhHHHHHHHHHhcCCCC--CccCCH-HHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHH
Q 017143 44 QSRQQALKLANAFDWPL--KVFPGH-QELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVV 120 (376)
Q Consensus 44 ~~~~~~~~~~~~~~~~~--~~~~~~-~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~ 120 (376)
+-+...+++++++|+++ ..++.. -+++.+. +|++-|.+..-...++.+++-+ -||+|++-++++.+++|....+
T Consensus 99 ~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~--~gkPVilK~Gms~t~~ei~~av 175 (298)
T 3fs2_A 99 KALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAAR--TGRVVNVKKGQFLAPWDMKNVL 175 (298)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHH--TTSEEEEECCTTCCGGGHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh-CCEEEECccccCCHHHHHHHHc--cCCcEEEeCCCCCCHHHHHHHH
Confidence 44556677888999982 333322 2455555 9999999999888998888888 8999999999999999998888
Q ss_pred HHHHhCCC
Q 017143 121 DAARKRPD 128 (376)
Q Consensus 121 ~~a~~~~~ 128 (376)
+...+.++
T Consensus 176 e~i~~~Gn 183 (298)
T 3fs2_A 176 AKITESGN 183 (298)
T ss_dssp HHHHTTTC
T ss_pred HHHHHcCC
Confidence 88855433
No 430
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.69 E-value=0.92 Score=39.37 Aligned_cols=111 Identities=13% Similarity=0.137 Sum_probs=76.5
Q ss_pred EEEEeCChhh-----HHHHHHhhhhcCCCcEEEEEeCCC------------hhhHHHHHHHHHhcCCCC--CccC--CHH
Q 017143 9 YGIIGMGMMG-----REHFINLHHLRSQGVSVVCIADPH------------LQSRQQALKLANAFDWPL--KVFP--GHQ 67 (376)
Q Consensus 9 v~iiG~G~~g-----~~~~~~~~~~~~~~~~~~~v~d~~------------~~~~~~~~~~~~~~~~~~--~~~~--~~~ 67 (376)
+.|.|....+ ...+..++.. +++++-..... .+....+.++++++|+++ ..++ +.+
T Consensus 25 ~vIAgpc~~~~~e~a~~~a~~l~~~---Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~ 101 (262)
T 1zco_A 25 TIIAGPCSIESREQIMKVAEFLAEV---GIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVE 101 (262)
T ss_dssp EEEEECSBCCCHHHHHHHHHHHHHT---TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHc---CCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHH
Confidence 3455654443 3455555554 55554443322 334456677888999982 3333 333
Q ss_pred HHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhC
Q 017143 68 ELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKR 126 (376)
Q Consensus 68 ~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~ 126 (376)
++.+. +|++-|.+.+-.+.++.+++.+ .||+|++-++++.+++|+..-++.....
T Consensus 102 -~l~~~-vd~~kIga~~~~n~~ll~~~a~--~~kPV~lk~G~~~t~~e~~~Av~~i~~~ 156 (262)
T 1zco_A 102 -LVAKY-SDILQIGARNSQNFELLKEVGK--VENPVLLKRGMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp -HHHHH-CSEEEECGGGTTCHHHHHHHTT--SSSCEEEECCTTCCHHHHHHHHHHHHTT
T ss_pred -HHHhh-CCEEEECcccccCHHHHHHHHh--cCCcEEEecCCCCCHHHHHHHHHHHHHC
Confidence 44444 8999999999999999999999 8999999999999999988877666433
No 431
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.68 E-value=0.36 Score=42.76 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=44.1
Q ss_pred ceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCC-----hhhHHHHHHHHHhcCCCC--CccC---CHHHHhhCCC
Q 017143 6 TVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPH-----LQSRQQALKLANAFDWPL--KVFP---GHQELLDSGL 74 (376)
Q Consensus 6 ~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~-----~~~~~~~~~~~~~~~~~~--~~~~---~~~~~l~~~~ 74 (376)
+++|.|+| +|.+|...+..|.+. +.+|+++ +|+ +++.+..+.+. ..++.+ --++ +++++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~-~R~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~-- 76 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL---GHPTYVL-FRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQ-- 76 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT---TCCEEEE-CCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTT--
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC---CCcEEEE-ECCCcccchhHHHHHHHHH-hCCeEEEeCCCCCHHHHHHHHhC--
Confidence 46899999 599999999888875 6787764 565 33222222222 223320 1122 35566654
Q ss_pred CCEEEEeCCC
Q 017143 75 CDVVVVSTPN 84 (376)
Q Consensus 75 ~D~V~i~t~~ 84 (376)
+|+|+.++..
T Consensus 77 ~d~vi~~a~~ 86 (313)
T 1qyd_A 77 VDVVISALAG 86 (313)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999988764
No 432
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.66 E-value=0.38 Score=43.33 Aligned_cols=134 Identities=18% Similarity=0.150 Sum_probs=76.5
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHH-H---hhCCCCCE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQE-L---LDSGLCDV 77 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~-~---l~~~~~D~ 77 (376)
-+|.|+|+ |.+|...+..++.. +.++++ +++++++++.++ ++|.. .. + .++.+ + .....+|+
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~---G~~Vi~-~~~~~~~~~~~~----~~g~~-~~~d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHL---GATVIG-TVSTEEKAETAR----KLGCH-HTINYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT---TCEEEE-EESSHHHHHHHH----HHTCS-EEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHC---CCEEEE-EeCCHHHHHHHH----HcCCC-EEEECCCHHHHHHHHHHhCCCCCeE
Confidence 47899995 99999888777765 678775 567776444333 34543 11 1 23322 2 22235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEec----CCCCCHHHHHHHHHHHHhCCC-eEEEEeecccc--CH-----HHHH
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEK----PLCTTVADCKKVVDAARKRPD-ILVQVGLEYRY--MP-----PVAK 145 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EK----P~a~~~~e~~~l~~~a~~~~~-~~~~v~~~~r~--~p-----~~~~ 145 (376)
|+-++.. ...+.+.++++. .|+-|++-- |...+... ... .+ + +....+....| .| .+..
T Consensus 218 vi~~~g~-~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~~~~-----~~~-~~-~~~~~i~g~~~~~~~~~~~~~~~~~~ 288 (333)
T 1wly_A 218 VYDSIGK-DTLQKSLDCLRP-RGMCAAYGHASGVADPIRVVE-----DLG-VR-GSLFITRPALWHYMSNRSEIDEGSKC 288 (333)
T ss_dssp EEECSCT-TTHHHHHHTEEE-EEEEEECCCTTCCCCCCCHHH-----HTT-TT-TSCEEECCCGGGGSCSHHHHHHHHHH
T ss_pred EEECCcH-HHHHHHHHhhcc-CCEEEEEecCCCCcCCCChhH-----hhh-hc-CCcEEEEEeehhhccCHHHHHHHHHH
Confidence 9999887 667778888874 255555532 22233220 222 22 3 12233332222 33 4677
Q ss_pred HHHHHHcCCCCce
Q 017143 146 LIQIVKSGSIGQV 158 (376)
Q Consensus 146 ~k~~i~~g~iG~i 158 (376)
+.+++++|.|-.+
T Consensus 289 ~~~l~~~g~l~~~ 301 (333)
T 1wly_A 289 LFDAVKAGVLHSS 301 (333)
T ss_dssp HHHHHHTTSCCCC
T ss_pred HHHHHHCCCcCCC
Confidence 8888898887543
No 433
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.60 E-value=0.23 Score=44.33 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=50.0
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChh-hHHHHHHHHHhcCCCC--CccC---CHHHHhhCCCCCEEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQ-SRQQALKLANAFDWPL--KVFP---GHQELLDSGLCDVVV 79 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~-~~~~~~~~~~~~~~~~--~~~~---~~~~~l~~~~~D~V~ 79 (376)
.+|.|+|+ |.+|...+..|.+. +.+|+++ +|++. +.+..+++. ..++.+ --++ +++++++. +|+|+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~---g~~V~~l-~R~~~~~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~a~~~--~d~vi 84 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL---GHPTYVF-TRPNSSKTTLLDEFQ-SLGAIIVKGELDEHEKLVELMKK--VDVVI 84 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT---TCCEEEE-ECTTCSCHHHHHHHH-HTTCEEEECCTTCHHHHHHHHTT--CSEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHC---CCcEEEE-ECCCCchhhHHHHhh-cCCCEEEEecCCCHHHHHHHHcC--CCEEE
Confidence 48999995 99999999888875 6787765 45553 222222332 224321 1122 35566654 89999
Q ss_pred EeCCC---CccHHHHHHHHc
Q 017143 80 VSTPN---MTHYQILMDIIN 96 (376)
Q Consensus 80 i~t~~---~~h~~~~~~al~ 96 (376)
.++.. .....++..|.+
T Consensus 85 ~~a~~~~~~~~~~l~~aa~~ 104 (318)
T 2r6j_A 85 SALAFPQILDQFKILEAIKV 104 (318)
T ss_dssp ECCCGGGSTTHHHHHHHHHH
T ss_pred ECCchhhhHHHHHHHHHHHh
Confidence 88864 234455555555
No 434
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.57 E-value=0.18 Score=45.62 Aligned_cols=88 Identities=11% Similarity=0.063 Sum_probs=51.7
Q ss_pred CCceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCCh----hhHHHHHHHHHhcCCC-----CCccCCHHHHhhCC
Q 017143 4 NDTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHL----QSRQQALKLANAFDWP-----LKVFPGHQELLDSG 73 (376)
Q Consensus 4 ~~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~----~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~ 73 (376)
|++.+|.|+|+ |++|...+..|.+. +.+|+++. |++ ++....+++.. .++. +.-.++++++++..
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~---g~~V~~l~-R~~~~~~~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDA---HRPTYILA-RPGPRSPSKAKIFKALED-KGAIIVYGLINEQEAMEKILKEH 82 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHT---TCCEEEEE-CSSCCCHHHHHHHHHHHH-TTCEEEECCTTCHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC---CCCEEEEE-CCCCCChhHHHHHHHHHh-CCcEEEEeecCCHHHHHHHHhhC
Confidence 34579999997 99999999888875 57877654 544 32222223321 2332 11223456777743
Q ss_pred CCCEEEEeCCC---CccHHHHHHHHc
Q 017143 74 LCDVVVVSTPN---MTHYQILMDIIN 96 (376)
Q Consensus 74 ~~D~V~i~t~~---~~h~~~~~~al~ 96 (376)
.+|+|+.+... ..+..++..|.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHH
Confidence 59999988874 233445555555
No 435
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.55 E-value=0.64 Score=42.60 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=59.1
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhh---CCCCCEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLD---SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~---~~~~D~V 78 (376)
-+|.|+|+ |.+|...+...+.. +.++++++ ++++++ +++++|.+ .++ .++.+.+. ...+|+|
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~---Ga~Vi~~~--~~~~~~----~~~~lGa~-~vi~~~~~~~~~~v~~~t~g~~d~v 235 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS---GYIPIATC--SPHNFD----LAKSRGAE-EVFDYRAPNLAQTIRTYTKNNLRYA 235 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT---TCEEEEEE--CGGGHH----HHHHTTCS-EEEETTSTTHHHHHHHHTTTCCCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHC---CCEEEEEe--CHHHHH----HHHHcCCc-EEEECCCchHHHHHHHHccCCccEE
Confidence 57999999 88998877766654 77998886 455433 55667765 222 23433332 1349999
Q ss_pred EEeCCCCccHHHHHHHH-cCCCCCeEEE
Q 017143 79 VVSTPNMTHYQILMDII-NHPKPHHVLV 105 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al-~~~~g~~Vl~ 105 (376)
+-++......+.+.++| +. .|+-|++
T Consensus 236 ~d~~g~~~~~~~~~~~l~~~-~G~iv~~ 262 (371)
T 3gqv_A 236 LDCITNVESTTFCFAAIGRA-GGHYVSL 262 (371)
T ss_dssp EESSCSHHHHHHHHHHSCTT-CEEEEES
T ss_pred EECCCchHHHHHHHHHhhcC-CCEEEEE
Confidence 99999877788888888 43 3655554
No 436
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.53 E-value=0.072 Score=48.84 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=45.3
Q ss_pred CCCCCceeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-----CC-ccCCHHHHhhCC
Q 017143 1 MAANDTVKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-----LK-VFPGHQELLDSG 73 (376)
Q Consensus 1 m~~~~~~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~l~~~ 73 (376)
|..|++++|.|.| +|++|...+..|.+. ++.+|+++ ++++++ ...+...-++. +. -.++++++++.
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~--~g~~V~~~-~r~~~~---~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~- 91 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILET--TDWEVFGM-DMQTDR---LGDLVKHERMHFFEGDITINKEWVEYHVKK- 91 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHH--SSCEEEEE-ESCCTT---TGGGGGSTTEEEEECCTTTCHHHHHHHHHH-
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhC--CCCEEEEE-eCChhh---hhhhccCCCeEEEeCccCCCHHHHHHHhcc-
Confidence 4455678999999 699999999988886 68898876 465542 22222212222 11 11234556664
Q ss_pred CCCEEEEeCC
Q 017143 74 LCDVVVVSTP 83 (376)
Q Consensus 74 ~~D~V~i~t~ 83 (376)
+|+|+-+..
T Consensus 92 -~d~Vih~A~ 100 (372)
T 3slg_A 92 -CDVILPLVA 100 (372)
T ss_dssp -CSEEEECBC
T ss_pred -CCEEEEcCc
Confidence 899987554
No 437
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=93.53 E-value=0.28 Score=43.91 Aligned_cols=77 Identities=9% Similarity=0.128 Sum_probs=53.8
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCC----ChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADP----HLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
+.+||++||= +++++..+..+..+ +++++.++-. .++-.+.+++.+++.|..+..++|.++++++ .|+|+
T Consensus 156 ~glkva~vGD~~rva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvvy 230 (323)
T 3gd5_A 156 AGLKLAYVGDGNNVAHSLLLGCAKV---GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARG--AHILY 230 (323)
T ss_dssp TTCEEEEESCCCHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTT--CSEEE
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc---CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEE
Confidence 3589999995 55677777777776 7887765522 2233345666666777666688999999987 89988
Q ss_pred EeCCCCc
Q 017143 80 VSTPNMT 86 (376)
Q Consensus 80 i~t~~~~ 86 (376)
.-+.-..
T Consensus 231 t~~wqs~ 237 (323)
T 3gd5_A 231 TDVWTSM 237 (323)
T ss_dssp ECCCC--
T ss_pred EeceecC
Confidence 8765443
No 438
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.48 E-value=0.079 Score=48.90 Aligned_cols=132 Identities=14% Similarity=0.106 Sum_probs=78.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc------CCHHHHhhC---CCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF------PGHQELLDS---GLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~---~~~D 76 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++ +++++|.+ .++ .++.+.+.+ ..+|
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~---Ga~~Vi~-~~~~~~~~~----~a~~lGa~-~vi~~~~~~~~~~~~i~~~~~gg~D 265 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTA---GASRIIG-IDIDSKKYE----TAKKFGVN-EFVNPKDHDKPIQEVIVDLTDGGVD 265 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH---TCSCEEE-ECSCTTHHH----HHHTTTCC-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEE-EcCCHHHHH----HHHHcCCc-EEEccccCchhHHHHHHHhcCCCCC
Confidence 4799999999999877776665 66 5665 577777443 45567765 221 234333321 2699
Q ss_pred EEEEeCCCCccHHHHHHHHcCCCCCeEEEecCC-----CCCHHHHHHHHHHHHhCCCeEEEEeecccc--CHHHHHHHHH
Q 017143 77 VVVVSTPNMTHYQILMDIINHPKPHHVLVEKPL-----CTTVADCKKVVDAARKRPDILVQVGLEYRY--MPPVAKLIQI 149 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~-----a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~--~p~~~~~k~~ 149 (376)
+|+-++........+.++++.+.|+-|++--+. ..+.. ... . ++.+.-.+...+ ...+..+.++
T Consensus 266 ~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~------~~~-~--~~~i~g~~~~~~~~~~~~~~~~~l 336 (378)
T 3uko_A 266 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF------QLV-T--GRVWKGTAFGGFKSRTQVPWLVEK 336 (378)
T ss_dssp EEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTH------HHH-T--TCEEEECSGGGCCHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHH------HHh-c--CcEEEEEEecCCCchHHHHHHHHH
Confidence 999999987778888888883115556554321 11211 122 1 333332222322 2356777788
Q ss_pred HHcCCCC
Q 017143 150 VKSGSIG 156 (376)
Q Consensus 150 i~~g~iG 156 (376)
+.+|++-
T Consensus 337 ~~~g~l~ 343 (378)
T 3uko_A 337 YMNKEIK 343 (378)
T ss_dssp HHTTSSC
T ss_pred HHcCCCC
Confidence 8887764
No 439
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.48 E-value=0.56 Score=42.95 Aligned_cols=83 Identities=11% Similarity=0.076 Sum_probs=66.3
Q ss_pred ChhhHHHHHHHHHhcCCC--CCccCCH-HHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHH
Q 017143 42 HLQSRQQALKLANAFDWP--LKVFPGH-QELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKK 118 (376)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~ 118 (376)
..+-.....+.+++.|++ ...|+.- -++|++-++|+.=|++.+-.++++++++.+ .||+|++-.-|+ |++|...
T Consensus 99 ~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~--~gKPViLStGma-Tl~Ei~~ 175 (385)
T 1vli_A 99 PAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVAR--LNRPMIFSTAGA-EISDVHE 175 (385)
T ss_dssp CGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTC-CHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCC-CHHHHHH
Confidence 334446677888899988 2334422 256666678999999999999999999999 899999999998 9999999
Q ss_pred HHHHHHhCC
Q 017143 119 VVDAARKRP 127 (376)
Q Consensus 119 l~~~a~~~~ 127 (376)
-++...+.+
T Consensus 176 Ave~i~~~G 184 (385)
T 1vli_A 176 AWRTIRAEG 184 (385)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHCC
Confidence 999995543
No 440
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.40 E-value=0.1 Score=47.45 Aligned_cols=131 Identities=15% Similarity=0.097 Sum_probs=77.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhh---CCCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLD---SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~---~~~~D~V 78 (376)
-+|.|+|+|.+|...+..++.. +. ++++ .++++++++.+ +++ .. .+ + .++.+.+. ...+|+|
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~---Ga~~Vi~-~~~~~~~~~~~----~~l-a~-~v~~~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRAS---GAGPILV-SDPNPYRLAFA----RPY-AD-RLVNPLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCSEEE-ECSCHHHHGGG----TTT-CS-EEECTTTSCHHHHHHHHHSSCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEE-ECCCHHHHHHH----HHh-HH-hccCcCccCHHHHHHHhcCCCCCEE
Confidence 3799999999999877766654 67 7775 56777644333 333 22 11 1 24444443 2358999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecC---CCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCCC
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKP---LCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGSI 155 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP---~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~i 155 (376)
+.++......+.+.++++. .|+-|++--+ ...+.. .... .+ ++.+.-.+..+....+..+.+++++|++
T Consensus 236 id~~g~~~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~~-----~~~~-~~-~~~i~g~~~~~~~~~~~~~~~l~~~g~~ 307 (343)
T 2dq4_A 236 LEFSGNEAAIHQGLMALIP-GGEARILGIPSDPIRFDLA-----GELV-MR-GITAFGIAGRRLWQTWMQGTALVYSGRV 307 (343)
T ss_dssp EECSCCHHHHHHHHHHEEE-EEEEEECCCCSSCEEECHH-----HHTG-GG-TCEEEECCSCCTTHHHHHHHHHHHHTSS
T ss_pred EECCCCHHHHHHHHHHHhc-CCEEEEEecCCCCceeCcH-----HHHH-hC-ceEEEEeecCCCHHHHHHHHHHHHcCCC
Confidence 9999876667778888874 2555555322 222220 1222 22 4444333222255678888899998874
No 441
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A*
Probab=93.38 E-value=0.79 Score=43.18 Aligned_cols=339 Identities=13% Similarity=0.067 Sum_probs=164.7
Q ss_pred CceeEEEEeC-ChhhH-HHHHHhhhh-----cCCCcEEEEEeCCChhhHH-----------------HHHHHHHhc----
Q 017143 5 DTVKYGIIGM-GMMGR-EHFINLHHL-----RSQGVSVVCIADPHLQSRQ-----------------QALKLANAF---- 56 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~-~~~~~~~~~-----~~~~~~~~~v~d~~~~~~~-----------------~~~~~~~~~---- 56 (376)
.+.-+.|.|+ |-.++ ..+|+|-++ .++++.|+|+.-++-+..+ ..++|++..
T Consensus 4 ~~~~~VIFGatGDLA~RKL~PaLy~L~~~g~Lp~~~~iiG~aR~~~~~~~~r~~~~~~l~~~~~~~~~~~~F~~~~~Y~~ 83 (489)
T 2bh9_A 4 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA 83 (489)
T ss_dssp CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEESSCCCHHHHHHHHGGGSCCCGGGHHHHHHHHHTEEEEE
T ss_pred CCeEEEEeCCcHHHHHHhHHHHHHHHHHcCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHhcccCCHHHHHHHHhcCEEEe
Confidence 3467889995 76765 577877664 1367999998744322111 112222221
Q ss_pred -CCC-CCccCCHHHHhhCC-----CCCEEEEeCCCCccHHHHHHHHcCC---C-CCeEEEecCCCCCHHHHHHHHHHHHh
Q 017143 57 -DWP-LKVFPGHQELLDSG-----LCDVVVVSTPNMTHYQILMDIINHP---K-PHHVLVEKPLCTTVADCKKVVDAARK 125 (376)
Q Consensus 57 -~~~-~~~~~~~~~~l~~~-----~~D~V~i~t~~~~h~~~~~~al~~~---~-g~~Vl~EKP~a~~~~e~~~l~~~a~~ 125 (376)
++. ...|..+.+.++.. .--+.++++||..-..++...-++| . ..-|.+|||+..+++.|++|-+...
T Consensus 84 ~d~~~~~~~~~L~~~l~~~~~~~~~nr~fYLA~pP~~f~~i~~~L~~~gl~~~g~~RvViEKPFG~DL~SA~~Ln~~l~- 162 (489)
T 2bh9_A 84 GQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHIS- 162 (489)
T ss_dssp CCSSCHHHHHHHHHHHHTTTTTTTSEEEEEECSCTTSHHHHHHHHHHHSCCSSSCEEEEECSCSCSSHHHHHHHHHHHT-
T ss_pred cCCCCHHHHHHHHHHHHHhhccCCCceEEEEeCCHHHHHHHHHHHHHhCCCcCCceEEEEeCCCCCchhhHHHHHHHHH-
Confidence 000 01122222333321 1248889999997666655443311 1 2479999999999999999999883
Q ss_pred CCCeEEEEeeccccC-----HHHHHHHHHHHcCC-CC------ceEEEEEeeccCCcccccCccccccccCCcccccccc
Q 017143 126 RPDILVQVGLEYRYM-----PPVAKLIQIVKSGS-IG------QVKMVAIREHRFPFLVKVNDWNRFNENTGGTLVEKCC 193 (376)
Q Consensus 126 ~~~~~~~v~~~~r~~-----p~~~~~k~~i~~g~-iG------~i~~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~g~ 193 (376)
+ .+-....+|=+ ..++-+.-+-=++. +. -|-.|++...=.-....+.. . =...|++-|+.-
T Consensus 163 ~---~F~E~qIyRIDHYLGKE~VQNll~lRFaN~ifeplWNr~~Id~VqIt~aE~~GvegRgg--Y--YD~~GalRDmvQ 235 (489)
T 2bh9_A 163 S---LFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGG--Y--FDEFGIIRDVMQ 235 (489)
T ss_dssp T---TSCGGGEEECCGGGGCHHHHHHHHHHHSCGGGSTTCSTTTEEEEEEEEECSCCCTTCHH--H--HTTTHHHHHTTT
T ss_pred h---hCCHHHeeecccccchHHHHHHHHHHHhhHHHHhhhcccccceEEEEEecCCCccchhh--h--hhccchHHHHHH
Confidence 2 12222233322 23333322221211 11 23334332111000000000 0 123578888754
Q ss_pred -cHHHHHHHHhCCCCeE-------------------------EEEecccccc-------cCc-cccCCCCCcccccEEEE
Q 017143 194 -HFFDLMRLFVGSNPMR-------------------------VMASGAVDVN-------HKD-EMYNGKVPDIIDNAYVI 239 (376)
Q Consensus 194 -H~ld~~~~l~G~~~~~-------------------------V~a~~~~~~~-------~~~-~~~~~~~~~~~d~~~~~ 239 (376)
|.+.++..+.=++|.+ |.++=..... .+- +..-+..+.++.++.+.
T Consensus 236 NHLlQlL~lvAMEpP~s~~a~~iRdEKvKVLralrp~~~~~~VrGQY~~g~~~~g~~v~gY~~E~~V~~~S~TeTfaA~k 315 (489)
T 2bh9_A 236 NHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVV 315 (489)
T ss_dssp THHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCGGGEEEEEEECCTTSCSTTSSCGGGCTTSCTTCCCCSEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhccCCCCccCeEEecccCCcCCCCCCCCCcccCCCCCCCCCCcceEEEE
Confidence 8888888775445543 3333211100 000 00112345678888888
Q ss_pred EEecC----CcEEEEEEEEeecCCCCceEEEEEecCCe------------eeee--ccc-ceeeeecccCCcc-ceEEe-
Q 017143 240 VEFEN----GSRGMLDLCMFAEGSKNEQEIVVVGNTGK------------GEAF--VPE-SIVRFATREAGRE-DVQTL- 298 (376)
Q Consensus 240 l~~~~----G~~~~l~~~~~~~~~~~~~~~~i~Gt~G~------------i~~~--~~~-~~~~~~~~~~~~~-~~~~~- 298 (376)
+..+| |+-..+.++...... ..++.|+..+-- +.+. .++ -.+.+..+.++.. .....
T Consensus 316 l~IdN~RW~GVPFylRtGKrL~~r--~teI~I~Fk~~p~~~f~~~~~~N~LviriqP~e~i~l~~~~K~PG~~~~~~~~~ 393 (489)
T 2bh9_A 316 LYVENERWDGVPFILRCGKALNER--KAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESE 393 (489)
T ss_dssp EEBCSTTTTTCEEEEEEESSCSSC--EEEEEEEECCCSSCCSTTCCCCCEEEEEEESSCEEEEEEEEECTTTCCSEEEEE
T ss_pred EEEcCcCcCCCCEEEEcCCCCCcc--eEEEEEEecCCChhhcccCCCCCEEEEEeCCCCeEEEEEeccCCCCCCcceeee
Confidence 88877 677777655433221 124444444311 1111 111 0112222222211 01111
Q ss_pred -eccCccccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Q 017143 299 -KAEDDRIEYEGLHHGSSYLEHLNFLSAIRAKGAKVPAVDLQDGLISVAIGVAAQLSIEKG 358 (376)
Q Consensus 299 -~~~~~~~~~~~~~~~~~~~~l~~f~~~i~~~~~~~~~~~~~d~~~~~~ii~a~~~S~~~g 358 (376)
..............+.| -+-++++++ ++...=...++...+=++++-+.+..+.+
T Consensus 394 ld~~~~~~~~~~~~p~aY---ErLllD~~~--Gd~tlF~r~DEve~aW~ivdpil~~w~~~ 449 (489)
T 2bh9_A 394 LDLTYGNRYKNVKLPDAY---ERLILDVFC--GSQMHFVRSDELREAWRIFTPLLHQIELE 449 (489)
T ss_dssp EEEETTTSSSSSCCCCHH---HHHHHHHHH--TCCTTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEechhcccCCCCCchH---HHHHHHHHc--CChhcCCChHHHHHHHHHHhHHHHHHhhC
Confidence 11000000000011122 245778887 77777688899999999999999987753
No 442
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.37 E-value=0.27 Score=44.42 Aligned_cols=143 Identities=12% Similarity=0.037 Sum_probs=79.5
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhhC---CCCCEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLDS---GLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~---~~~D~V 78 (376)
-+|.|+|+ |.+|...+..++.. +.+++++ ++++++ .+.+++++|.. ..+ .++.+.+.+ ..+|+|
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~---Ga~Vi~~-~~~~~~---~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~d~v 222 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLK---GCRVVGI-AGGAEK---CRFLVEELGFD-GAIDYKNEDLAAGLKRECPKGIDVF 222 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT---TCEEEEE-ESSHHH---HHHHHHTTCCS-EEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC---CCEEEEE-eCCHHH---HHHHHHHcCCC-EEEECCCHHHHHHHHHhcCCCceEE
Confidence 47999998 99998877766664 7787765 566663 43443567765 221 234333321 358999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHH----HHHHHHHHHhCCCeEEEEeecccc----CHHHHHHHHHH
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVAD----CKKVVDAARKRPDILVQVGLEYRY----MPPVAKLIQIV 150 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e----~~~l~~~a~~~~~~~~~v~~~~r~----~p~~~~~k~~i 150 (376)
+-++.. .....+..+++.+ |+-|++=.+...+..+ -..+.... .+ ++.+.-.....+ ...+..+.+++
T Consensus 223 i~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~-~~-~~~i~g~~~~~~~~~~~~~~~~~~~l~ 298 (336)
T 4b7c_A 223 FDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYLSLL-VN-RARMEGMVVMDYAQRFPEGLKEMATWL 298 (336)
T ss_dssp EESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTTTHHH-HT-TCEEEECCGGGGGGGHHHHHHHHHHHH
T ss_pred EECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhHHHHH-hC-CcEEEEEEhhhhhhhhHHHHHHHHHHH
Confidence 988874 4556666677642 5555553221100000 00112233 23 444443333333 25667788888
Q ss_pred HcCCCCceEEE
Q 017143 151 KSGSIGQVKMV 161 (376)
Q Consensus 151 ~~g~iG~i~~~ 161 (376)
++|.|-.....
T Consensus 299 ~~g~l~~~~~~ 309 (336)
T 4b7c_A 299 AEGKLQSREDI 309 (336)
T ss_dssp HTTSSCCCEEE
T ss_pred HCCCcccceee
Confidence 88887655444
No 443
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=93.29 E-value=0.35 Score=42.37 Aligned_cols=79 Identities=18% Similarity=0.184 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHhcCCCC--CccC--CHHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHH
Q 017143 44 QSRQQALKLANAFDWPL--KVFP--GHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKV 119 (376)
Q Consensus 44 ~~~~~~~~~~~~~~~~~--~~~~--~~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l 119 (376)
+-+...+++++++|+++ ..++ +. +++.+. +|++-|.+-.-...++.+++-+ .||+|++-++++.+++|....
T Consensus 78 ~GL~~L~~~~~e~Glp~~Tev~d~~~v-~~l~~~-vd~lqIgA~~~~n~~LLr~va~--~gkPVilK~G~~~t~~ei~~a 153 (285)
T 3sz8_A 78 EGLKIFAEVKARFGVPVITDVHEAEQA-APVAEI-ADVLQVPAFLARQTDLVVAIAK--AGKPVNVKKPQFMSPTQLKHV 153 (285)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSGGGH-HHHHTT-CSEEEECGGGTTCHHHHHHHHH--TSSCEEEECCTTSCGGGTHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCHHHH-HHHHHh-CCEEEECccccCCHHHHHHHHc--cCCcEEEeCCCCCCHHHHHHH
Confidence 44566778888999982 3333 33 445555 9999999999899999998888 899999999999999998877
Q ss_pred HHHHHhC
Q 017143 120 VDAARKR 126 (376)
Q Consensus 120 ~~~a~~~ 126 (376)
++...+.
T Consensus 154 ve~i~~~ 160 (285)
T 3sz8_A 154 VSKCGEV 160 (285)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 7776444
No 444
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=93.26 E-value=0.25 Score=43.24 Aligned_cols=97 Identities=10% Similarity=0.032 Sum_probs=60.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--C-CccCCHHHHhhCCCCCEEEEeCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--L-KVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
.+|.-+|+|. |...+..+... .+..++++ +|.+++..+.+++..+.+++. + -...|+.+.+....+|+|++..|
T Consensus 114 ~~VLDiG~G~-G~~~~~la~~~-~~~~~v~~-vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 114 DRIIDTGVGS-GAMCAVLARAV-GSSGKVFA-YEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVP 190 (277)
T ss_dssp CEEEEECCTT-SHHHHHHHHHT-TTTCEEEE-ECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCS
T ss_pred CEEEEECCcC-CHHHHHHHHHh-CCCcEEEE-EECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCc
Confidence 5899999996 55444333332 15678775 699998877777766666652 1 12346666555556899998665
Q ss_pred CC-ccHHHHHHHHcCCCCCeEEEecC
Q 017143 84 NM-THYQILMDIINHPKPHHVLVEKP 108 (376)
Q Consensus 84 ~~-~h~~~~~~al~~~~g~~Vl~EKP 108 (376)
.. .-.+.+.++|+ .|-.++++-|
T Consensus 191 ~~~~~l~~~~~~L~--pgG~l~~~~~ 214 (277)
T 1o54_A 191 DPWNYIDKCWEALK--GGGRFATVCP 214 (277)
T ss_dssp CGGGTHHHHHHHEE--EEEEEEEEES
T ss_pred CHHHHHHHHHHHcC--CCCEEEEEeC
Confidence 43 44555566666 4444555444
No 445
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.22 E-value=0.74 Score=41.90 Aligned_cols=132 Identities=9% Similarity=0.011 Sum_probs=77.8
Q ss_pred eeEEEEeCChhhHHH-HHHh-hhhcCCCcE-EEEEeCCChh---hHHHHHHHHHhcCCC-CCccC--CHHHHhh-CCCCC
Q 017143 7 VKYGIIGMGMMGREH-FINL-HHLRSQGVS-VVCIADPHLQ---SRQQALKLANAFDWP-LKVFP--GHQELLD-SGLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~-~~~~-~~~~~~~~~-~~~v~d~~~~---~~~~~~~~~~~~~~~-~~~~~--~~~~~l~-~~~~D 76 (376)
-+|.|+|+|.+|... +..+ +.. +.+ ++++. ++++ +++. ++++|.+ + .++ ++.++.+ ...+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~---Ga~~Vi~~~-~~~~~~~~~~~----~~~lGa~~v-~~~~~~~~~i~~~~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK---GYENLYCLG-RRDRPDPTIDI----IEELDATYV-DSRQTPVEDVPDVYEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT---CCCEEEEEE-CCCSSCHHHHH----HHHTTCEEE-ETTTSCGGGHHHHSCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc---CCcEEEEEe-CCcccHHHHHH----HHHcCCccc-CCCccCHHHHHHhCCCCC
Confidence 589999999999988 6665 444 776 77654 5444 4433 4456654 1 122 2322111 22689
Q ss_pred EEEEeCCCCccHHHHHHHHcCCCCCeEEEe----cCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHc
Q 017143 77 VVVVSTPNMTHYQILMDIINHPKPHHVLVE----KPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKS 152 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~g~~Vl~E----KP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~ 152 (376)
+|+-++........+.++++.+ |+-|++- .+...+.... +.+.. .+ ++.+. +........+..+.+++++
T Consensus 245 vvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~--~~~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~ 318 (357)
T 2b5w_A 245 FIYEATGFPKHAIQSVQALAPN-GVGALLGVPSDWAFEVDAGAF--HREMV-LH-NKALV-GSVNSHVEHFEAATVTFTK 318 (357)
T ss_dssp EEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCCCCCCCCHHHH--HHHHH-HT-TCEEE-ECCCCCHHHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCCCCceecHHHH--hHHHH-hC-CeEEE-EeccCCHHHHHHHHHHHHh
Confidence 9999998766677888888742 6555553 3344444332 11223 33 44443 3333234567888899988
Q ss_pred C
Q 017143 153 G 153 (376)
Q Consensus 153 g 153 (376)
|
T Consensus 319 g 319 (357)
T 2b5w_A 319 L 319 (357)
T ss_dssp S
T ss_pred C
Confidence 7
No 446
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.19 E-value=0.17 Score=46.52 Aligned_cols=130 Identities=12% Similarity=0.091 Sum_probs=78.1
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc------CCHHHHhhC---CCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF------PGHQELLDS---GLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~---~~~D 76 (376)
-+|.|+|+|.+|...+...+.. +. ++++ +++++++++. ++++|.+ .++ .++.+.+.+ ..+|
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~-~~~~~~~~~~----a~~lGa~-~vi~~~~~~~~~~~~i~~~t~gg~D 263 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAA---GASRIIG-VGTHKDKFPK----AIELGAT-ECLNPKDYDKPIYEVICEKTNGGVD 263 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCSEEEE-ECSCGGGHHH----HHHTTCS-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEE-ECCCHHHHHH----HHHcCCc-EEEecccccchHHHHHHHHhCCCCC
Confidence 4799999999999877766665 66 6664 5777775443 4456754 222 234443331 2589
Q ss_pred EEEEeCCCCccHHHHHHHHcCCC-CCeEEEecCC-----CCCHHHHHHHHHHHHhCCCeEEEEeec-cccC-HHHHHHHH
Q 017143 77 VVVVSTPNMTHYQILMDIINHPK-PHHVLVEKPL-----CTTVADCKKVVDAARKRPDILVQVGLE-YRYM-PPVAKLIQ 148 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~-g~~Vl~EKP~-----a~~~~e~~~l~~~a~~~~~~~~~v~~~-~r~~-p~~~~~k~ 148 (376)
+|+-++........+.++++. . |+-|++--+. ..+. .... .+ . .+ .+.. ..+. ..+..+.+
T Consensus 264 vvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~------~~~~-~~-~-~i-~g~~~~~~~~~~~~~~~~ 332 (373)
T 1p0f_A 264 YAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDP------LLLL-TG-R-SL-KGSVFGGFKGEEVSRLVD 332 (373)
T ss_dssp EEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECT------HHHH-TT-C-EE-EECSGGGCCGGGHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCH------HHhc-cC-c-eE-EeeccCCcCHHHHHHHHH
Confidence 999999876667778888872 2 5555553322 1222 1223 22 3 23 3322 2333 46778888
Q ss_pred HHHcCCCC
Q 017143 149 IVKSGSIG 156 (376)
Q Consensus 149 ~i~~g~iG 156 (376)
++++|+|-
T Consensus 333 l~~~g~i~ 340 (373)
T 1p0f_A 333 DYMKKKIN 340 (373)
T ss_dssp HHHTTSSC
T ss_pred HHHcCCCC
Confidence 89888763
No 447
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=93.16 E-value=0.78 Score=38.18 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=46.9
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CC-ccCCHHHH---hhCCCCCEEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LK-VFPGHQEL---LDSGLCDVVVV 80 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~---l~~~~~D~V~i 80 (376)
.-+|.=|||| .|...+...... ++.++++ +|.++...+.+++-+++.+++ +. ...|..++ +....+|+|++
T Consensus 42 ~~~vLDiGcG-~G~~~~~la~~~--p~~~v~g-vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 42 NPIHVEVGSG-KGAFVSGMAKQN--PDINYIG-IDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCEEEEESCT-TSHHHHHHHHHC--TTSEEEE-EESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCeEEEEccC-cCHHHHHHHHHC--CCCCEEE-EEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 3578999998 444333333444 6788887 599998777777666665653 11 12344433 33446899998
Q ss_pred eCCC
Q 017143 81 STPN 84 (376)
Q Consensus 81 ~t~~ 84 (376)
.-|.
T Consensus 118 ~~~~ 121 (214)
T 1yzh_A 118 NFSD 121 (214)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 8664
No 448
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=93.15 E-value=0.22 Score=45.34 Aligned_cols=89 Identities=10% Similarity=0.019 Sum_probs=50.9
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhh---CCCCCEEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLD---SGLCDVVV 79 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~---~~~~D~V~ 79 (376)
-+|.|+|+ |.+|...+...+.. ...++++++ ++++.+ +++ +|.+ .++ .++.+.+. ...+|+|+
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~--g~~~V~~~~--~~~~~~----~~~-~ga~-~~~~~~~~~~~~~~~~~~~g~Dvv~ 213 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTV--PNVTVFGTA--STFKHE----AIK-DSVT-HLFDRNADYVQEVKRISAEGVDIVL 213 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTS--TTCEEEEEE--CGGGHH----HHG-GGSS-EEEETTSCHHHHHHHHCTTCEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc--CCcEEEEeC--CHHHHH----HHH-cCCc-EEEcCCccHHHHHHHhcCCCceEEE
Confidence 47999998 89998877766655 467888776 334322 222 5554 222 23433332 23589999
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEec
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEK 107 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EK 107 (376)
-++.... ...+.++++. .|+-|++-.
T Consensus 214 d~~g~~~-~~~~~~~l~~-~G~~v~~G~ 239 (349)
T 4a27_A 214 DCLCGDN-TGKGLSLLKP-LGTYILYGS 239 (349)
T ss_dssp EECC--------CTTEEE-EEEEEEEC-
T ss_pred ECCCchh-HHHHHHHhhc-CCEEEEECC
Confidence 9987654 3566677764 366677644
No 449
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A*
Probab=93.04 E-value=1.1 Score=42.27 Aligned_cols=120 Identities=13% Similarity=0.156 Sum_probs=71.8
Q ss_pred CceeEEEEeC-ChhhH-HHHHHhhhhc-----CCCcEEEEEeCCChhhH---HHH--------------HHHHHhc----
Q 017143 5 DTVKYGIIGM-GMMGR-EHFINLHHLR-----SQGVSVVCIADPHLQSR---QQA--------------LKLANAF---- 56 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~-~~~~~~~~~~-----~~~~~~~~v~d~~~~~~---~~~--------------~~~~~~~---- 56 (376)
.+.-+.|.|+ |-.++ ..+|+|-++- ++++.|+|+.-++-+.. +.+ ++|++..
T Consensus 4 ~~~~~VIFGatGDLA~RKL~PaLy~L~~~g~Lp~~~~iiG~aR~~~~~~~~r~~~~~~l~~~~~~~~~~~~F~~~~~Y~~ 83 (485)
T 1dpg_A 4 IKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDCIKDFTDDQAQAEAFIEHFSYRA 83 (485)
T ss_dssp CCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEE
T ss_pred CCeEEEEECCcHHHHHHhHHHHHHHHHhcCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHHhcccCHHHHHHHHhcCEEec
Confidence 3467888995 76765 5777776552 36799999874432211 111 1222211
Q ss_pred -CCC-CCccCCHHHHhhC-------CCCCEEEEeCCCCccHHHHHHHHcCCC-----CCeEEEecCCCCCHHHHHHHHHH
Q 017143 57 -DWP-LKVFPGHQELLDS-------GLCDVVVVSTPNMTHYQILMDIINHPK-----PHHVLVEKPLCTTVADCKKVVDA 122 (376)
Q Consensus 57 -~~~-~~~~~~~~~~l~~-------~~~D~V~i~t~~~~h~~~~~~al~~~~-----g~~Vl~EKP~a~~~~e~~~l~~~ 122 (376)
++. ...|..+.+.++. ..--+.++++||..-..++...-++|- ..-|.+|||+..+++.|++|-+.
T Consensus 84 ~d~~~~~~~~~L~~~l~~l~~~~~~~~nr~fYLA~pP~~f~~i~~~L~~~gl~~~~g~~RvViEKPFG~DL~SA~~Ln~~ 163 (485)
T 1dpg_A 84 HDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQND 163 (485)
T ss_dssp CCTTCTTHHHHHHHHHHHHHHHTTCCSCEEEEECSCGGGHHHHHHHHHHTTCSCSSSCEEEEECSCCCSSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHhhhhccCCCceEEEEeCCHHHHHHHHHHHHhcCCCCCCCceEEEEeCCCCCchhhHHHHHHH
Confidence 111 1222333334431 123588999999976666655444221 24799999999999999999998
Q ss_pred HH
Q 017143 123 AR 124 (376)
Q Consensus 123 a~ 124 (376)
..
T Consensus 164 l~ 165 (485)
T 1dpg_A 164 LE 165 (485)
T ss_dssp HT
T ss_pred HH
Confidence 83
No 450
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.00 E-value=0.23 Score=45.12 Aligned_cols=134 Identities=14% Similarity=0.125 Sum_probs=76.6
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-C-Cc--cCCHHHHhhC---CCCCEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-L-KV--FPGHQELLDS---GLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~-~~--~~~~~~~l~~---~~~D~V 78 (376)
-+|.|+|+ |.+|...+..++.. +.++++ +++++++.+ +++++|.. + .. ..++.+.+.+ ..+|+|
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~---Ga~V~~-~~~~~~~~~----~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~v 242 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAM---GYRVLG-IDGGEGKEE----LFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGV 242 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEE-EECSTTHHH----HHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHC---CCcEEE-EcCCHHHHH----HHHHcCCceEEecCccHhHHHHHHHHhCCCCCEE
Confidence 47999998 88999887776665 678775 466666433 33445643 1 11 1345544432 158999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCC----CCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHHHcCC
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPL----CTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIVKSGS 154 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~----a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i~~g~ 154 (376)
+.++........+.++++. .|+-|++--+- ..+. .... .+ ++.+. +........+..+.+++++|.
T Consensus 243 i~~~g~~~~~~~~~~~l~~-~G~iv~~g~~~~~~~~~~~------~~~~-~~-~~~i~-g~~~~~~~~~~~~~~l~~~g~ 312 (347)
T 2hcy_A 243 INVSVSEAAIEASTRYVRA-NGTTVLVGMPAGAKCCSDV------FNQV-VK-SISIV-GSYVGNRADTREALDFFARGL 312 (347)
T ss_dssp EECSSCHHHHHHHTTSEEE-EEEEEECCCCTTCEEEEEH------HHHH-HT-TCEEE-ECCCCCHHHHHHHHHHHHTTS
T ss_pred EECCCcHHHHHHHHHHHhc-CCEEEEEeCCCCCCCCCCH------HHHh-hC-CcEEE-EccCCCHHHHHHHHHHHHhCC
Confidence 9998865555566666663 25555553322 1222 1223 22 33333 332222345777888888887
Q ss_pred CCce
Q 017143 155 IGQV 158 (376)
Q Consensus 155 iG~i 158 (376)
+-.+
T Consensus 313 l~~~ 316 (347)
T 2hcy_A 313 VKSP 316 (347)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 7543
No 451
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=92.99 E-value=0.12 Score=49.06 Aligned_cols=74 Identities=12% Similarity=0.144 Sum_probs=55.9
Q ss_pred CCCCCccCCHHHHhhCC-CCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEee
Q 017143 57 DWPLKVFPGHQELLDSG-LCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGL 135 (376)
Q Consensus 57 ~~~~~~~~~~~~~l~~~-~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~ 135 (376)
++| +|.+|.++.+.+ .+|+++|++|...-.+.+.+|++ +|..++|= .-....++-++|.+.|+++ |+.+ +|.
T Consensus 20 ~~P--v~~~~~~~~~~p~~~DlavI~vPa~~v~~~v~e~~~--~Gv~~vii-s~Gf~~~~~~~l~~~A~~~-g~rl-iGP 92 (480)
T 3dmy_A 20 ALT--QVRRWDSACQKLPDANLALISVAGEYAAELANQALD--RNLNVMMF-SDNVTLEDEIQLKTRAREK-GLLV-MGP 92 (480)
T ss_dssp CCE--EESSHHHHHHHSTTCCEEEECSCHHHHHHHHHHHHH--TTCEEEEC-CCCCCHHHHHHHHHHHHHT-TCCE-ECS
T ss_pred CCc--ccchHHHHHhcCCCCCEEEEecCHHHHHHHHHHHHh--cCCCEEEE-CCCCCHHHHHHHHHHHHHc-CCEE-Eec
Confidence 566 888888887764 69999999999999999999999 77776662 2233477778999999554 6554 444
Q ss_pred cc
Q 017143 136 EY 137 (376)
Q Consensus 136 ~~ 137 (376)
|+
T Consensus 93 Nc 94 (480)
T 3dmy_A 93 DC 94 (480)
T ss_dssp SC
T ss_pred Cc
Confidence 44
No 452
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=92.97 E-value=0.38 Score=43.29 Aligned_cols=76 Identities=9% Similarity=0.148 Sum_probs=53.4
Q ss_pred CceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCC----ChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 5 DTVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADP----HLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 5 ~~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
+.+||++||= +++++..+..+..+ +++++.++-. +++-.+.+++.+++.|..+..++|.++++++ .|+|+
T Consensus 178 ~glkva~vGD~~nva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvy 252 (340)
T 4ep1_A 178 KGIKLAYVGDGNNVCHSLLLASAKV---GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNE--ADFIY 252 (340)
T ss_dssp TTCEEEEESCCCHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEE
T ss_pred CCCEEEEECCCchhHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEE
Confidence 3589999995 55677788888887 7887765522 2333345666677778665678999999987 89998
Q ss_pred EeCCCC
Q 017143 80 VSTPNM 85 (376)
Q Consensus 80 i~t~~~ 85 (376)
.-..-.
T Consensus 253 t~~w~s 258 (340)
T 4ep1_A 253 TDVWMS 258 (340)
T ss_dssp ECCC--
T ss_pred ecCccC
Confidence 866543
No 453
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=92.94 E-value=0.49 Score=41.90 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=49.3
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-C-CccCCHHHHhhCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-L-KVFPGHQELLDSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~~D~V~i~t~ 83 (376)
.-+|..||||..+...+. +++. ++.++++| |.+++..+.|++..++.|++ + -...+..++- +..+|+|++..-
T Consensus 123 g~rVLDIGcG~G~~ta~~-lA~~--~ga~V~gI-Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~~FDvV~~~a~ 197 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGIL-LSHV--YGMRVNVV-EIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GLEFDVLMVAAL 197 (298)
T ss_dssp TCEEEEECCCSSCHHHHH-HHHT--TCCEEEEE-ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GCCCSEEEECTT
T ss_pred cCEEEEECCCccHHHHHH-HHHc--cCCEEEEE-ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CCCcCEEEECCC
Confidence 579999999975432221 3444 67898875 99999888888887776753 1 1234555543 456999997653
No 454
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.89 E-value=0.16 Score=46.32 Aligned_cols=138 Identities=7% Similarity=0.054 Sum_probs=77.2
Q ss_pred eeEEEE-eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhh---CCCCCEE
Q 017143 7 VKYGII-GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLD---SGLCDVV 78 (376)
Q Consensus 7 ~~v~ii-G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~---~~~~D~V 78 (376)
-+|.|+ |+|.+|...+..++.. +.++++ +++++++++.++ ++|.+ .. + .++.+.+. ...+|+|
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~---Ga~Vi~-~~~~~~~~~~~~----~lGa~-~~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAF---GAEVYA-TAGSTGKCEACE----RLGAK-RGINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT---TCEEEE-EESSHHHHHHHH----HHTCS-EEEETTTSCHHHHHHHHHSSCEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc---CCEEEE-EeCCHHHHHHHH----hcCCC-EEEeCCchHHHHHHHHHhCCCceEE
Confidence 478999 5799999887777664 778775 567777544444 44544 11 1 23333332 2358999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHH---------HHHHHHH
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPP---------VAKLIQI 149 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~---------~~~~k~~ 149 (376)
+-++... ....+..+++. .|+-|++--+....... ..+.... .+ ++.+.-.....+... +..+.++
T Consensus 240 id~~g~~-~~~~~~~~l~~-~G~iv~~g~~~~~~~~~-~~~~~~~-~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l 314 (353)
T 4dup_A 240 LDMIGAA-YFERNIASLAK-DGCLSIIAFLGGAVAEK-VNLSPIM-VK-RLTVTGSTMRPRTAEEKRAIRDDLLSEVWPL 314 (353)
T ss_dssp EESCCGG-GHHHHHHTEEE-EEEEEECCCTTCSEEEE-EECHHHH-HT-TCEEEECCSTTSCHHHHHHHHHHHHHHTHHH
T ss_pred EECCCHH-HHHHHHHHhcc-CCEEEEEEecCCCcccC-CCHHHHH-hc-CceEEEEeccccchhhhHHHHHHHHHHHHHH
Confidence 9998864 56667777774 35555554322111000 0112233 33 444444433333321 5667778
Q ss_pred HHcCCCCce
Q 017143 150 VKSGSIGQV 158 (376)
Q Consensus 150 i~~g~iG~i 158 (376)
+++|.|-.+
T Consensus 315 ~~~g~l~~~ 323 (353)
T 4dup_A 315 LEAGTVAPV 323 (353)
T ss_dssp HHHTSSCCC
T ss_pred HHCCCccCC
Confidence 888887544
No 455
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.85 E-value=0.4 Score=43.04 Aligned_cols=88 Identities=18% Similarity=0.099 Sum_probs=56.3
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHH-HHhh---CCCCCE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQ-ELLD---SGLCDV 77 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~l~---~~~~D~ 77 (376)
-+|.|+| +|.+|...+..++.. +.++++ +++++++++.+++ +|.. ..+ .++. ++.+ ...+|+
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~---G~~V~~-~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~D~ 212 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKAL---GAKLIG-TVGTAQKAQSALK----AGAW-QVINYREEDLVERLKEITGGKKVRV 212 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHH---TCEEEE-EESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHTTTCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHc---CCEEEE-EeCCHHHHHHHHH----cCCC-EEEECCCccHHHHHHHHhCCCCceE
Confidence 4789999 699999888777776 678775 5677765444433 4543 111 2332 2222 235899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEE
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~ 105 (376)
|+.++. ......+.++++. .|+-|++
T Consensus 213 vi~~~g-~~~~~~~~~~l~~-~G~iv~~ 238 (327)
T 1qor_A 213 VYDSVG-RDTWERSLDCLQR-RGLMVSF 238 (327)
T ss_dssp EEECSC-GGGHHHHHHTEEE-EEEEEEC
T ss_pred EEECCc-hHHHHHHHHHhcC-CCEEEEE
Confidence 999998 6667778888874 2555555
No 456
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.85 E-value=0.29 Score=44.99 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=77.3
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc------CCHHHHhhC---CCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF------PGHQELLDS---GLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~---~~~D 76 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++. ++++|.+ .++ +++.+.+.+ ..+|
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~-~~~~~~~~~~----~~~lGa~-~vi~~~~~~~~~~~~~~~~~~~g~D 263 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAA---GAARIIG-VDINKDKFAK----AKEVGAT-ECVNPQDYKKPIQEVLTEMSNGGVD 263 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEE-ECSCGGGHHH----HHHTTCS-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEE-EcCCHHHHHH----HHHhCCc-eEecccccchhHHHHHHHHhCCCCc
Confidence 4799999999999877766654 66 6664 5777775443 3456654 222 234444332 2589
Q ss_pred EEEEeCCCCccHHHHHHHHcCCC-CCeEEEecC-----CCCCHHHHHHHHHHHHhCCCeEEEEeec-ccc--CHHHHHHH
Q 017143 77 VVVVSTPNMTHYQILMDIINHPK-PHHVLVEKP-----LCTTVADCKKVVDAARKRPDILVQVGLE-YRY--MPPVAKLI 147 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~-g~~Vl~EKP-----~a~~~~e~~~l~~~a~~~~~~~~~v~~~-~r~--~p~~~~~k 147 (376)
+|+.++........+.++++. . |+-|++--+ +..+.. ... .+ + .+ .+.. ..+ ...+..+.
T Consensus 264 ~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~------~~~-~~-~-~i-~g~~~~~~~~~~~~~~~~ 332 (374)
T 2jhf_A 264 FSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPM------LLL-SG-R-TW-KGAIFGGFKSKDSVPKLV 332 (374)
T ss_dssp EEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTH------HHH-TT-C-EE-EECSGGGCCHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHH------HHh-cC-C-eE-EEeccCCCChHHHHHHHH
Confidence 999999876667788888872 2 455554322 122221 223 23 3 33 3332 222 24577788
Q ss_pred HHHHcCCCC
Q 017143 148 QIVKSGSIG 156 (376)
Q Consensus 148 ~~i~~g~iG 156 (376)
+++++|+|-
T Consensus 333 ~l~~~g~i~ 341 (374)
T 2jhf_A 333 ADFMAKKFA 341 (374)
T ss_dssp HHHHTTSSC
T ss_pred HHHHcCCCC
Confidence 888888763
No 457
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=92.85 E-value=0.46 Score=39.98 Aligned_cols=76 Identities=16% Similarity=0.121 Sum_probs=50.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CC-ccCCHHHH----hhCCCCCEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LK-VFPGHQEL----LDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~----l~~~~~D~V~ 79 (376)
..+|.=|||| .|...+...... ++..++| +|.++...+.+++-+++.+++ +. ...|..++ +.+..+|.|+
T Consensus 35 ~~~vLDiGcG-~G~~~~~lA~~~--p~~~v~g-iD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 35 APVTLEIGFG-MGASLVAMAKDR--PEQDFLG-IEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCEEEEESCT-TCHHHHHHHHHC--TTSEEEE-ECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCeEEEEeee-ChHHHHHHHHHC--CCCeEEE-EEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 3578899998 444333333344 7888887 599998887777777666654 22 23577766 4455689999
Q ss_pred EeCCCC
Q 017143 80 VSTPNM 85 (376)
Q Consensus 80 i~t~~~ 85 (376)
+..|+.
T Consensus 111 ~~~~~p 116 (218)
T 3dxy_A 111 LFFPDP 116 (218)
T ss_dssp EESCCC
T ss_pred EeCCCC
Confidence 886544
No 458
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=92.81 E-value=0.3 Score=45.68 Aligned_cols=83 Identities=22% Similarity=0.288 Sum_probs=51.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhC-CCCCEEEEeCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDS-GLCDVVVVSTP 83 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~D~V~i~t~ 83 (376)
+.-||+|+|.|..|+.++.+++++ +++++. +|+++.. .+.+++.++-+ .-|.|.+.+++- ..+|+|+.. .
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~l---G~~v~v-~d~~~~~--p~~~~ad~~~~--~~~~d~~~l~~~a~~~D~V~~~-~ 104 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSM---GYRVAV-LDPDPAS--PAGAVADRHLR--AAYDDEAALAELAGLCEAVSTE-F 104 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT---TCEEEE-ECSCTTC--HHHHHSSEEEC--CCTTCHHHHHHHHHHCSEEEEC-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC---CCEEEE-ECCCCcC--chhhhCCEEEE--CCcCCHHHHHHHHhcCCEEEEc-c
Confidence 345999999999999999988887 889764 5776653 35555544322 245665544431 248988743 2
Q ss_pred CCccHHHHHHHHc
Q 017143 84 NMTHYQILMDIIN 96 (376)
Q Consensus 84 ~~~h~~~~~~al~ 96 (376)
.+.....+..+-+
T Consensus 105 e~~~~~~~~~l~~ 117 (419)
T 4e4t_A 105 ENVPAASLDFLAR 117 (419)
T ss_dssp TTCCHHHHHHHHT
T ss_pred CcCCHHHHHHHHc
Confidence 3333344443333
No 459
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.79 E-value=0.31 Score=44.67 Aligned_cols=130 Identities=17% Similarity=0.170 Sum_probs=77.4
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc------CCHHHHhhC---CCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF------PGHQELLDS---GLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~---~~~D 76 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++.++ ++|.+ .++ +++.+.+.+ ..+|
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~---Ga~~Vi~-~~~~~~~~~~~~----~lGa~-~vi~~~~~~~~~~~~v~~~~~~g~D 262 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVA---GASRIIG-VDINKDKFARAK----EFGAT-ECINPQDFSKPIQEVLIEMTDGGVD 262 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCSEEEE-ECSCGGGHHHHH----HHTCS-EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEE-EcCCHHHHHHHH----HcCCc-eEeccccccccHHHHHHHHhCCCCC
Confidence 4799999999999887766665 66 6664 577777555444 45654 222 234443332 2589
Q ss_pred EEEEeCCCCccHHHHHHHHcCCC-CCeEEEecC-----CCCCHHHHHHHHHHHHhCCCeEEEEeec-ccc--CHHHHHHH
Q 017143 77 VVVVSTPNMTHYQILMDIINHPK-PHHVLVEKP-----LCTTVADCKKVVDAARKRPDILVQVGLE-YRY--MPPVAKLI 147 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~-g~~Vl~EKP-----~a~~~~e~~~l~~~a~~~~~~~~~v~~~-~r~--~p~~~~~k 147 (376)
+|+.++........+.++++. . |+-|++--+ +..+. .... .+ . .+ .+.. ..+ ...+..+.
T Consensus 263 ~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~------~~~~-~~-~-~i-~g~~~~~~~~~~~~~~~~ 331 (373)
T 2fzw_A 263 YSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRP------FQLV-TG-R-TW-KGTAFGGWKSVESVPKLV 331 (373)
T ss_dssp EEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECT------HHHH-TT-C-EE-EECSGGGCCHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCH------HHHh-cC-C-EE-EEeccCCCCcHHHHHHHH
Confidence 999999876667778888872 2 555554322 12222 1233 23 3 22 3332 222 34577788
Q ss_pred HHHHcCCCC
Q 017143 148 QIVKSGSIG 156 (376)
Q Consensus 148 ~~i~~g~iG 156 (376)
+++++|.+-
T Consensus 332 ~l~~~g~l~ 340 (373)
T 2fzw_A 332 SEYMSKKIK 340 (373)
T ss_dssp HHHHTTSSC
T ss_pred HHHHcCCCC
Confidence 888887764
No 460
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.75 E-value=0.13 Score=43.09 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=55.7
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-cCCHHHHhhCCCCCEEEEeCCC
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-FPGHQELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~t~~ 84 (376)
|||.|.| +|++|+..+..|.+. +.+|+++ +|++++.+.... ..-...++.- .++++++++ ++|+|+.+...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~---g~~V~~~-~R~~~~~~~~~~-~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT---DYQIYAG-ARKVEQVPQYNN-VKAVHFDVDWTPEEMAKQLH--GMDAIINVSGS 73 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS---SCEEEEE-ESSGGGSCCCTT-EEEEECCTTSCHHHHHTTTT--TCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC---CCEEEEE-ECCccchhhcCC-ceEEEecccCCHHHHHHHHc--CCCEEEECCcC
Confidence 3899999 699999998888874 7888865 566653211100 0000111111 123444454 48999988765
Q ss_pred CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhC
Q 017143 85 MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKR 126 (376)
Q Consensus 85 ~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~ 126 (376)
.. +..+..+..-...+.+++++.
T Consensus 74 ~~-------------------~~~~~~n~~~~~~l~~a~~~~ 96 (219)
T 3dqp_A 74 GG-------------------KSLLKVDLYGAVKLMQAAEKA 96 (219)
T ss_dssp TT-------------------SSCCCCCCHHHHHHHHHHHHT
T ss_pred CC-------------------CCcEeEeHHHHHHHHHHHHHh
Confidence 43 124556677777788888544
No 461
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=92.73 E-value=1.6 Score=36.39 Aligned_cols=75 Identities=11% Similarity=0.031 Sum_probs=47.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CC-ccCCHHHH---hhCCCCCEEEE
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LK-VFPGHQEL---LDSGLCDVVVV 80 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~---l~~~~~D~V~i 80 (376)
..+|.=|||| .|...+...... ++.+++| +|.++..++.+++-+++.+++ +. ...|..++ +.+..+|.|++
T Consensus 39 ~~~vLDiGcG-~G~~~~~la~~~--p~~~v~g-iD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 39 NPIHIEVGTG-KGQFISGMAKQN--PDINYIG-IELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCEEEEECCT-TSHHHHHHHHHC--TTSEEEE-ECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CceEEEEecC-CCHHHHHHHHHC--CCCCEEE-EEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 3578889999 344333323334 6888887 599998777777766666654 21 22455443 44556899988
Q ss_pred eCCC
Q 017143 81 STPN 84 (376)
Q Consensus 81 ~t~~ 84 (376)
.-|+
T Consensus 115 ~~~~ 118 (213)
T 2fca_A 115 NFSD 118 (213)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 7654
No 462
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.73 E-value=0.34 Score=44.96 Aligned_cols=90 Identities=17% Similarity=0.157 Sum_probs=55.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc--CCH-HHHhh----CCCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF--PGH-QELLD----SGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~l~----~~~~D~V 78 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++ +++++|..+-.+ .++ .+.+. ...+|+|
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~-~~~~~~~~~----~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARLL---GAACVIV-GDQNPERLK----LLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCSEEEE-EESCHHHHH----HHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEE-EcCCHHHHH----HHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEE
Confidence 4799999999999877766665 66 7765 566776433 445666531112 222 22222 2258999
Q ss_pred EEeCCCCc--------------cHHHHHHHHcCCCCCeEEE
Q 017143 79 VVSTPNMT--------------HYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 79 ~i~t~~~~--------------h~~~~~~al~~~~g~~Vl~ 105 (376)
+-++.... ..+.+.++++.+ |+-|++
T Consensus 259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~ 298 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIP 298 (398)
T ss_dssp EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECC
T ss_pred EECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEe
Confidence 99998653 467778888732 444443
No 463
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=92.71 E-value=0.27 Score=43.79 Aligned_cols=73 Identities=23% Similarity=0.237 Sum_probs=43.8
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHH-HHHHHHHh--cCCCCCcc-CCHHHHhhCCCCCEEE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQ-QALKLANA--FDWPLKVF-PGHQELLDSGLCDVVV 79 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~-~~~~~~~~--~~~~~~~~-~~~~~~l~~~~~D~V~ 79 (376)
+||+|+| +|++|...+..+... +.+.-+.++|+ ++++.+ .+..+... ++.+++.. ++ .+.+++ .|+|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~-~~a~~~--aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG-YEDTAG--SDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC-GGGGTT--CSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCC-HHHhCC--CCEEE
Confidence 5899999 999999877777664 33332457898 765432 12333221 12222222 34 445554 89999
Q ss_pred EeCCC
Q 017143 80 VSTPN 84 (376)
Q Consensus 80 i~t~~ 84 (376)
++...
T Consensus 76 ~~ag~ 80 (303)
T 1o6z_A 76 ITAGI 80 (303)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 99864
No 464
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=92.68 E-value=0.81 Score=37.92 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=45.5
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC--CCc-cCCHHHHhh-CCCCCEEEEe
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP--LKV-FPGHQELLD-SGLCDVVVVS 81 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~l~-~~~~D~V~i~ 81 (376)
.-+|.-||||. |..-+ .++.. +.++++ +|.+++..+.+++.++++|++ +.. ..|..+.+. .+.+|+|++.
T Consensus 56 ~~~vLDlGcG~-G~~~~-~la~~---~~~v~~-vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~ 129 (204)
T 3njr_A 56 GELLWDIGGGS-GSVSV-EWCLA---GGRAIT-IEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIG 129 (204)
T ss_dssp TCEEEEETCTT-CHHHH-HHHHT---TCEEEE-EESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEEC
T ss_pred CCEEEEecCCC-CHHHH-HHHHc---CCEEEE-EeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEEC
Confidence 35899999995 54332 23332 567776 699999887777777777764 222 345655443 3468998865
Q ss_pred C
Q 017143 82 T 82 (376)
Q Consensus 82 t 82 (376)
.
T Consensus 130 ~ 130 (204)
T 3njr_A 130 G 130 (204)
T ss_dssp S
T ss_pred C
Confidence 4
No 465
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.67 E-value=0.28 Score=45.13 Aligned_cols=130 Identities=15% Similarity=0.178 Sum_probs=77.1
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc------CCHHHHhh---CCCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF------PGHQELLD---SGLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~---~~~~D 76 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++. ++++|.+ .++ +++.+.+. ...+|
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~---Ga~~Vi~-~~~~~~~~~~----a~~lGa~-~vi~~~~~~~~~~~~v~~~~~~g~D 267 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA---GASRIIA-IDINGEKFPK----AKALGAT-DCLNPRELDKPVQDVITELTAGGVD 267 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEE-ECSCGGGHHH----HHHTTCS-EEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCeEEE-EcCCHHHHHH----HHHhCCc-EEEccccccchHHHHHHHHhCCCcc
Confidence 4799999999999877766654 66 6665 5777775443 4456654 222 23444332 12689
Q ss_pred EEEEeCCCCccHHHHHHHHcCCC-CCeEEEec---CCCCCHHHHHHHHHHHHhCCCeEEEEeec-ccc--CHHHHHHHHH
Q 017143 77 VVVVSTPNMTHYQILMDIINHPK-PHHVLVEK---PLCTTVADCKKVVDAARKRPDILVQVGLE-YRY--MPPVAKLIQI 149 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~-g~~Vl~EK---P~a~~~~e~~~l~~~a~~~~~~~~~v~~~-~r~--~p~~~~~k~~ 149 (376)
+|+-++........+.++++. . |+-|++-- ++..+. .... .+ + .+ .+.. ..+ ...+..+.++
T Consensus 268 vvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~------~~~~-~~-~-~i-~g~~~~~~~~~~~~~~~~~l 336 (376)
T 1e3i_A 268 YSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAKVDEMTIPT------VDVI-LG-R-SI-NGTFFGGWKSVDSVPNLVSD 336 (376)
T ss_dssp EEEESSCCHHHHHHHHHTBCT-TTCEEEECCCSSSEEEEEH------HHHH-TT-C-EE-EECSGGGCCHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHhhc-CCCEEEEECCCCCccccCH------HHhh-cc-C-eE-EEEecCCCCcHHHHHHHHHH
Confidence 999999876667778888872 2 45555432 222222 2233 23 3 33 3322 222 3457778888
Q ss_pred HHcCCCC
Q 017143 150 VKSGSIG 156 (376)
Q Consensus 150 i~~g~iG 156 (376)
+++|+|-
T Consensus 337 ~~~g~i~ 343 (376)
T 1e3i_A 337 YKNKKFD 343 (376)
T ss_dssp HHTTSSC
T ss_pred HHcCCCC
Confidence 8888764
No 466
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.63 E-value=0.37 Score=43.39 Aligned_cols=140 Identities=11% Similarity=0.029 Sum_probs=76.0
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCC-CCcc---CCHHHHhhC---CCCCEE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWP-LKVF---PGHQELLDS---GLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~l~~---~~~D~V 78 (376)
-++.|+|+ |.+|...+..++.. +.++++ +++++++++.+ +++|.. +-.+ .++.+.+.. ..+|+|
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~---G~~V~~-~~~~~~~~~~~----~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLK---GCKVVG-AAGSDEKIAYL----KQIGFDAAFNYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHT---TCEEEE-EESSHHHHHHH----HHTTCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHHHC---CCEEEE-EeCCHHHHHHH----HhcCCcEEEecCCHHHHHHHHHHHhCCCCeEE
Confidence 47999997 99999887777665 678775 56776643333 455543 1011 345444432 358999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCH-H---HHHHHHHHHHhCCCeEEEEeecccc-----CHHHHHHHHH
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTV-A---DCKKVVDAARKRPDILVQVGLEYRY-----MPPVAKLIQI 149 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~-~---e~~~l~~~a~~~~~~~~~v~~~~r~-----~p~~~~~k~~ 149 (376)
+.++... ....+.++++. .|+-|++-.+...+. . ....+.... .+ ++.+.-.+..++ ...+..+.++
T Consensus 219 i~~~g~~-~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~i~g~~~~~~~~~~~~~~~~~~~~l 294 (333)
T 1v3u_A 219 FDNVGGE-FLNTVLSQMKD-FGKIAICGAISVYNRMDQLPPGPSPESII-YK-QLRIEGFIVYRWQGDVREKALRDLMKW 294 (333)
T ss_dssp EESSCHH-HHHHHHTTEEE-EEEEEECCCCC-------CCBCCCHHHHH-HT-TCEEEECCGGGCCTHHHHHHHHHHHHH
T ss_pred EECCChH-HHHHHHHHHhc-CCEEEEEeccccccCCCCCCCCcCHHHHh-hc-CceEEEEehhhcchHHHHHHHHHHHHH
Confidence 9888753 34555566663 266666543211000 0 000122333 33 444443333333 3345667888
Q ss_pred HHcCCCCce
Q 017143 150 VKSGSIGQV 158 (376)
Q Consensus 150 i~~g~iG~i 158 (376)
+++|++--.
T Consensus 295 ~~~g~l~~~ 303 (333)
T 1v3u_A 295 VLEGKIQYH 303 (333)
T ss_dssp HHTTSSCCC
T ss_pred HHCCCccCc
Confidence 898887543
No 467
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.62 E-value=0.42 Score=43.68 Aligned_cols=89 Identities=12% Similarity=0.109 Sum_probs=56.8
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc----CCHHHHhhC---CCCCEE
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF----PGHQELLDS---GLCDVV 78 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~---~~~D~V 78 (376)
-+|.|+| +|.+|...+..++.. +.+++++ ++++++++ +++++|.+ .++ .++.+.+.. ..+|+|
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~---Ga~Vi~~-~~~~~~~~----~~~~~Ga~-~~~~~~~~~~~~~~~~~~~~g~D~v 235 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKA---KCHVIGT-CSSDEKSA----FLKSLGCD-RPINYKTEPVGTVLKQEYPEGVDVV 235 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHT---TCEEEEE-ESSHHHHH----HHHHTTCS-EEEETTTSCHHHHHHHHCTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHhC---CCEEEEE-ECCHHHHH----HHHHcCCc-EEEecCChhHHHHHHHhcCCCCCEE
Confidence 4799999 699999877766664 6787754 56666433 33456654 221 244444432 358999
Q ss_pred EEeCCCCccHHHHHHHHcCCCCCeEEEe
Q 017143 79 VVSTPNMTHYQILMDIINHPKPHHVLVE 106 (376)
Q Consensus 79 ~i~t~~~~h~~~~~~al~~~~g~~Vl~E 106 (376)
+-++.. .....+.++++. .|+-|++-
T Consensus 236 id~~g~-~~~~~~~~~l~~-~G~iv~~g 261 (362)
T 2c0c_A 236 YESVGG-AMFDLAVDALAT-KGRLIVIG 261 (362)
T ss_dssp EECSCT-HHHHHHHHHEEE-EEEEEECC
T ss_pred EECCCH-HHHHHHHHHHhc-CCEEEEEe
Confidence 999886 456667777774 36556553
No 468
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.51 E-value=0.37 Score=45.66 Aligned_cols=87 Identities=16% Similarity=0.077 Sum_probs=58.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCH-HHHhhCCCCCEEEEeCCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGH-QELLDSGLCDVVVVSTPN 84 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~D~V~i~t~~ 84 (376)
..+|.|||.|..|..-+..|.+. +.+++. ++++... ..+++.++.++. -....+ ++.|. +.|+|+++|..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~---ga~V~v-i~~~~~~--~~~~l~~~~~i~-~~~~~~~~~~l~--~~~lVi~at~~ 82 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA---GARLTV-NALTFIP--QFTVWANEGMLT-LVEGPFDETLLD--SCWLAIAATDD 82 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TBEEEE-EESSCCH--HHHHHHTTTSCE-EEESSCCGGGGT--TCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---cCEEEE-EcCCCCH--HHHHHHhcCCEE-EEECCCCccccC--CccEEEEcCCC
Confidence 46899999999999888888775 778774 4554332 445555545554 111222 22343 48999998887
Q ss_pred C-ccHHHHHHHHcCCCCCeE
Q 017143 85 M-THYQILMDIINHPKPHHV 103 (376)
Q Consensus 85 ~-~h~~~~~~al~~~~g~~V 103 (376)
. ....++..|-+ +|+.|
T Consensus 83 ~~~n~~i~~~a~~--~~i~v 100 (457)
T 1pjq_A 83 DTVNQRVSDAAES--RRIFC 100 (457)
T ss_dssp HHHHHHHHHHHHH--TTCEE
T ss_pred HHHHHHHHHHHHH--cCCEE
Confidence 6 47777778888 77776
No 469
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=92.45 E-value=0.52 Score=39.55 Aligned_cols=87 Identities=11% Similarity=-0.026 Sum_probs=50.5
Q ss_pred eeEEEEeCChhh--HHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHHhhC
Q 017143 7 VKYGIIGMGMMG--REHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQELLDS 72 (376)
Q Consensus 7 ~~v~iiG~G~~g--~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~l~~ 72 (376)
+||+|++.|.-. +..+.++... .-+.++++|+...++. ...+.|+++|+|+.. |.+ +.+.|+.
T Consensus 1 ~ri~vl~Sg~gsnl~ali~~~~~~-~~~~~i~~Vis~~~~~--~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~ 77 (212)
T 1jkx_A 1 MNIVVLISGNGSNLQAIIDACKTN-KIKGTVRAVFSNKADA--FGLERARQAGIATHTLIASAFDSREAYDRELIHEIDM 77 (212)
T ss_dssp CEEEEEESSCCHHHHHHHHHHHTT-SSSSEEEEEEESCTTC--HHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGG
T ss_pred CEEEEEEECCcHHHHHHHHHHHcC-CCCceEEEEEeCCCch--HHHHHHHHcCCcEEEeCcccccchhhccHHHHHHHHh
Confidence 478999887533 2333333332 1257888888654443 467888999998322 222 2244556
Q ss_pred CCCCEEEEeCCCCccHHHHHHHHc
Q 017143 73 GLCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 73 ~~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
.++|+++++.....=.+-++...+
T Consensus 78 ~~~Dliv~agy~~il~~~~l~~~~ 101 (212)
T 1jkx_A 78 YAPDVVVLAGFMRILSPAFVSHYA 101 (212)
T ss_dssp GCCSEEEESSCCSCCCHHHHHHTT
T ss_pred cCCCEEEEeChhhhCCHHHHhhcc
Confidence 679999988765433333334333
No 470
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=92.38 E-value=0.55 Score=45.30 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=29.7
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL 43 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~ 43 (376)
.-||.|||+|..|...+..|... ++.-+.++|.|.
T Consensus 32 ~~~VlvvG~GGlGseiak~La~a---GVg~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLP---GIGSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTT---TCSEEEEECCCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHc---CCCeEEEEeCCE
Confidence 46999999999999999988885 777777889865
No 471
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=92.35 E-value=0.62 Score=40.77 Aligned_cols=80 Identities=14% Similarity=0.226 Sum_probs=63.4
Q ss_pred hhhHHHHHHHHHhcCCCC--CccC--CHHHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHH
Q 017143 43 LQSRQQALKLANAFDWPL--KVFP--GHQELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKK 118 (376)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~--~~~~--~~~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~ 118 (376)
.+....++++++++|+++ ..++ +.+ ++++- +|++-|++.+-.+.++..++.+ -||+|++-++++.+++|...
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~-~l~~~-vd~~kIgs~~~~n~~ll~~~a~--~~kPV~lk~G~~~t~~ei~~ 163 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVE-TVSRY-ADMLQIGARNMQNFPLLREVGR--SGKPVLLKRGFGNTVEELLA 163 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHH-HHHHH-CSEEEECGGGTTCHHHHHHHHH--HTCCEEEECCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHH-HHHHh-CCeEEECcccccCHHHHHHHHc--cCCeEEEcCCCCCCHHHHHH
Confidence 344456778888999982 3333 333 44444 8999999999999999999998 88999999999999999988
Q ss_pred HHHHHHhC
Q 017143 119 VVDAARKR 126 (376)
Q Consensus 119 l~~~a~~~ 126 (376)
-++.+...
T Consensus 164 Ave~i~~~ 171 (276)
T 1vs1_A 164 AAEYILLE 171 (276)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 88887544
No 472
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.29 E-value=0.33 Score=44.54 Aligned_cols=131 Identities=14% Similarity=0.165 Sum_probs=78.0
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCcc------CCHHHHhhC---CCCC
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKVF------PGHQELLDS---GLCD 76 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~---~~~D 76 (376)
-+|.|+|+|.+|...+..++.. +. ++++ +++++++++. ++++|.+ .++ +++.+.+.+ ..+|
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~---Ga~~Vi~-~~~~~~~~~~----~~~lGa~-~vi~~~~~~~~~~~~~~~~~~~g~D 264 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSA---GAKRIIA-VDLNPDKFEK----AKVFGAT-DFVNPNDHSEPISQVLSKMTNGGVD 264 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCSEEEE-ECSCGGGHHH----HHHTTCC-EEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCCEEEE-EcCCHHHHHH----HHHhCCc-eEEeccccchhHHHHHHHHhCCCCC
Confidence 4799999999999877766654 66 6665 5777775443 3456654 222 234444332 2589
Q ss_pred EEEEeCCCCccHHHHHHHHcCCC-CCeEEEecC----CCCCHHHHHHHHHHHHhCCCeEEEEeecccc--CHHHHHHHHH
Q 017143 77 VVVVSTPNMTHYQILMDIINHPK-PHHVLVEKP----LCTTVADCKKVVDAARKRPDILVQVGLEYRY--MPPVAKLIQI 149 (376)
Q Consensus 77 ~V~i~t~~~~h~~~~~~al~~~~-g~~Vl~EKP----~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~--~p~~~~~k~~ 149 (376)
+|+-++........+.++++. . |+-|++--+ +..+.. ... .+ . .+.-.+...+ ...+..+.++
T Consensus 265 ~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~------~~~-~~-~-~i~g~~~~~~~~~~~~~~~~~l 334 (374)
T 1cdo_A 265 FSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDLHDVATRPI------QLI-AG-R-TWKGSMFGGFKGKDGVPKMVKA 334 (374)
T ss_dssp EEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSSSCEEECHH------HHH-TT-C-EEEECSGGGCCHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCCCCcccCHH------HHh-cC-C-eEEEEecCCCCcHHHHHHHHHH
Confidence 999999876667778888872 2 565655332 222222 233 23 3 3322222222 3467788888
Q ss_pred HHcCCCC
Q 017143 150 VKSGSIG 156 (376)
Q Consensus 150 i~~g~iG 156 (376)
+++|+|-
T Consensus 335 ~~~g~l~ 341 (374)
T 1cdo_A 335 YLDKKVK 341 (374)
T ss_dssp HHTTSSC
T ss_pred HHcCCCC
Confidence 8888763
No 473
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.17 E-value=0.19 Score=43.93 Aligned_cols=69 Identities=13% Similarity=-0.063 Sum_probs=44.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC--CccCCHHHHhhCCCCCEEEEeC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL--KVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~D~V~i~t 82 (376)
+++||.|.|+|++|...+..|.+. +.+|+++ ++++.+. ..+.. .++.. --.++++ + .++|+|+-+.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~---g~~V~~~-~r~~~~~---~~~~~-~~~~~~~~D~~d~~--~--~~~d~vi~~a 71 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ---GWRIIGT-SRNPDQM---EAIRA-SGAEPLLWPGEEPS--L--DGVTHLLIST 71 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG---TCEEEEE-ESCGGGH---HHHHH-TTEEEEESSSSCCC--C--TTCCEEEECC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC---CCEEEEE-EcChhhh---hhHhh-CCCeEEEecccccc--c--CCCCEEEECC
Confidence 357999999999999999888875 7888875 5666633 23222 23320 0112233 3 4589999887
Q ss_pred CCC
Q 017143 83 PNM 85 (376)
Q Consensus 83 ~~~ 85 (376)
...
T Consensus 72 ~~~ 74 (286)
T 3ius_A 72 APD 74 (286)
T ss_dssp CCB
T ss_pred Ccc
Confidence 653
No 474
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=92.15 E-value=0.19 Score=44.58 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=47.5
Q ss_pred CceeEEEEeCChhhHH---HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC----C-------HHHHh
Q 017143 5 DTVKYGIIGMGMMGRE---HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP----G-------HQELL 70 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~---~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~l 70 (376)
.++||+|.+.|. |.. .+.+.+.. .-.+++++|++..++ ++++|+++|+|+.... + +.++|
T Consensus 104 ~~~ri~vl~Sg~-g~nl~~ll~~~~~g-~l~~~I~~Visn~~~----~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l 177 (302)
T 3o1l_A 104 QKKRVVLMASRE-SHCLADLLHRWHSD-ELDCDIACVISNHQD----LRSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLV 177 (302)
T ss_dssp SCCEEEEEECSC-CHHHHHHHHHHHTT-CSCSEEEEEEESSST----THHHHHTTTCCEEECCCCSSCCHHHHHHHHHHH
T ss_pred CCcEEEEEEeCC-chhHHHHHHHHHCC-CCCcEEEEEEECcHH----HHHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHH
Confidence 478999999986 432 22222221 125799999876665 4567889999832221 1 23555
Q ss_pred hCCCCCEEEEeCCCC
Q 017143 71 DSGLCDVVVVSTPNM 85 (376)
Q Consensus 71 ~~~~~D~V~i~t~~~ 85 (376)
+..++|+|+++.--.
T Consensus 178 ~~~~~DliVlagym~ 192 (302)
T 3o1l_A 178 GHHQADVVVLARYMQ 192 (302)
T ss_dssp HHTTCSEEEESSCCS
T ss_pred HHhCCCEEEHhHhhh
Confidence 666799999887543
No 475
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=92.09 E-value=1.8 Score=40.21 Aligned_cols=114 Identities=19% Similarity=0.326 Sum_probs=70.1
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC----------ChhhHHHHHHHHHhcCCCCCccC-----CHHHH
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP----------HLQSRQQALKLANAFDWPLKVFP-----GHQEL 69 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~----------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 69 (376)
+..+|+|.|.|.+|...+..|.+. .+.+|++|+|. +.+ .+.++.++.+- +.-|. +.+++
T Consensus 208 ~g~~vaVqG~GnVG~~~a~~L~e~--~GakvVavsD~~G~i~dp~Gld~~---~l~~~~~~~g~-l~~y~~a~~~~~~ei 281 (415)
T 2tmg_A 208 KKATVAVQGFGNVGQFAALLISQE--LGSKVVAVSDSRGGIYNPEGFDVE---ELIRYKKEHGT-VVTYPKGERITNEEL 281 (415)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCCEEEEEECSSCEEECTTCCCHH---HHHHHHHHSSC-STTCSSSEEECHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHh--cCCEEEEEEeCCCeEECCCCCCHH---HHHHHHHhhCC-cccCCCceEcCchhh
Confidence 347999999999998877777762 38999999998 454 45555555431 11222 45677
Q ss_pred hhCCCCCEEEEeCCC-CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 017143 70 LDSGLCDVVVVSTPN-MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVG 134 (376)
Q Consensus 70 l~~~~~D~V~i~t~~-~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~ 134 (376)
+.. ++|+++=|+.. ..+.+-+.+ |+ ..+.+|--=.....++.++.+ ++ |+.+...
T Consensus 282 l~~-~~DIliP~A~~n~i~~~~a~~-l~----ak~V~EgAN~p~t~~a~~~l~---~~-Gi~~~PD 337 (415)
T 2tmg_A 282 LEL-DVDILVPAALEGAIHAGNAER-IK----AKAVVEGANGPTTPEADEILS---RR-GILVVPD 337 (415)
T ss_dssp TTC-SCSEEEECSSTTSBCHHHHTT-CC----CSEEECCSSSCBCHHHHHHHH---HT-TCEEECH
T ss_pred hcC-CCcEEEecCCcCccCcccHHH-cC----CeEEEeCCCcccCHHHHHHHH---HC-CCEEECh
Confidence 664 59999988764 344433332 23 347777622222255666643 44 6665533
No 476
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.08 E-value=0.14 Score=45.90 Aligned_cols=85 Identities=12% Similarity=0.105 Sum_probs=52.9
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEeCCCCc
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVSTPNMT 86 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t~~~~ 86 (376)
-+|.|+|+|.+|...+...+.. +.++++++ ++++.+.+ +++|.+ .+++|.+++ ...+|+|+-++....
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~---Ga~Vi~~~--~~~~~~~~----~~lGa~-~v~~d~~~v--~~g~Dvv~d~~g~~~ 211 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNA---GYVVDLVS--ASLSQALA----AKRGVR-HLYREPSQV--TQKYFAIFDAVNSQN 211 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEEC--SSCCHHHH----HHHTEE-EEESSGGGC--CSCEEEEECC-----
T ss_pred CEEEEECCCHHHHHHHHHHHHc---CCEEEEEE--ChhhHHHH----HHcCCC-EEEcCHHHh--CCCccEEEECCCchh
Confidence 4799999999999877766665 67988876 55544444 456655 444443333 346899998887643
Q ss_pred cHHHHHHHHcCCCCCeEEE
Q 017143 87 HYQILMDIINHPKPHHVLV 105 (376)
Q Consensus 87 h~~~~~~al~~~~g~~Vl~ 105 (376)
- ..+.++++. .|+-|.+
T Consensus 212 ~-~~~~~~l~~-~G~~v~~ 228 (315)
T 3goh_A 212 A-AALVPSLKA-NGHIICI 228 (315)
T ss_dssp ---TTGGGEEE-EEEEEEE
T ss_pred H-HHHHHHhcC-CCEEEEE
Confidence 3 456677764 3666776
No 477
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=92.08 E-value=1.5 Score=40.76 Aligned_cols=112 Identities=16% Similarity=0.192 Sum_probs=70.8
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC----------ChhhHHHHHHHHHhcCCCCCcc-CCHHHHhhCC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP----------HLQSRQQALKLANAFDWPLKVF-PGHQELLDSG 73 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 73 (376)
+..+|+|.|.|.+|...+..+.+. +.++++|+|. +.+ .+.++.++.+- +..| -+-++++..
T Consensus 217 ~gk~vaVqG~GnVG~~~a~~L~~~---GakVVavsD~~G~i~dp~Gld~~---~l~~~~~~~g~-v~~~~~~~~e~~~~- 288 (419)
T 3aoe_E 217 RGARVVVQGLGQVGAAVALHAERL---GMRVVAVATSMGGMYAPEGLDVA---EVLSAYEATGS-LPRLDLAPEEVFGL- 288 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT---TCEEEEEEETTEEEECTTCCCHH---HHHHHHHHHSS-CSCCCBCTTTGGGS-
T ss_pred cCCEEEEECcCHHHHHHHHHHHHC---CCEEEEEEcCCCeEECCCCCCHH---HHHHHHHhhCC-cceeeccchhhhcc-
Confidence 347899999999999888777765 8999999998 665 45555555441 1211 122456654
Q ss_pred CCCEEEEeCCCC-ccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 017143 74 LCDVVVVSTPNM-THYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQV 133 (376)
Q Consensus 74 ~~D~V~i~t~~~-~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v 133 (376)
++|+.+=|.... .+.+-+.+ |+ ..+++|--=.....++.++++.. |+.+..
T Consensus 289 ~~DVliP~A~~n~i~~~~A~~-l~----ak~V~EgAN~p~t~~A~~~L~~~----Gi~~~P 340 (419)
T 3aoe_E 289 EAEVLVLAAREGALDGDRARQ-VQ----AQAVVEVANFGLNPEAEAYLLGK----GALVVP 340 (419)
T ss_dssp SCSEEEECSCTTCBCHHHHTT-CC----CSEEEECSTTCBCHHHHHHHHHH----TCEEEC
T ss_pred CceEEEecccccccccchHhh-CC----ceEEEECCCCcCCHHHHHHHHHC----CCEEEC
Confidence 599999887654 44443332 33 45888873222226666665433 666653
No 478
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=92.07 E-value=0.33 Score=42.80 Aligned_cols=86 Identities=15% Similarity=0.104 Sum_probs=51.0
Q ss_pred CCceeEEEEeCChhhHH---HHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC----C-------HHHH
Q 017143 4 NDTVKYGIIGMGMMGRE---HFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP----G-------HQEL 69 (376)
Q Consensus 4 ~~~~~v~iiG~G~~g~~---~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~ 69 (376)
..++||+|.+.|. |.. .+.+.... .-..++++|++..++ ++.+|+++|+|+..+. + +.+.
T Consensus 88 ~~~~ri~vl~Sg~-g~~l~~ll~~~~~g-~l~~~i~~Visn~~~----~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~ 161 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DHCLNDLLYRQRIG-QLGMDVVAVVSNHPD----LEPLAHWHKIPYYHFALDPKDKPGQERKVLQV 161 (286)
T ss_dssp TCCCEEEEEESSC-CHHHHHHHHHHHTT-SSCCEEEEEEESSST----THHHHHHTTCCEEECCCBTTBHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCC-CCCHHHHHHHHHCC-CCCcEEEEEEeCcHH----HHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHH
Confidence 3478999999986 432 22222221 125799998876654 5567889999832211 1 2344
Q ss_pred hhCCCCCEEEEeCCCCccHHHHHHHH
Q 017143 70 LDSGLCDVVVVSTPNMTHYQILMDII 95 (376)
Q Consensus 70 l~~~~~D~V~i~t~~~~h~~~~~~al 95 (376)
|+..++|+|+++.-..-=.+-+++..
T Consensus 162 l~~~~~Dlivla~y~~il~~~~l~~~ 187 (286)
T 3n0v_A 162 IEETGAELVILARYMQVLSPELCRRL 187 (286)
T ss_dssp HHHHTCSEEEESSCCSCCCHHHHHHT
T ss_pred HHhcCCCEEEecccccccCHHHHhhh
Confidence 55557999998876543333333333
No 479
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=91.94 E-value=0.4 Score=47.14 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=29.0
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCCh
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHL 43 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~ 43 (376)
..||.|||+|.+|...+..|... |+.-+.|+|.|.
T Consensus 17 ~s~VlVVGaGGLGsevak~La~a---GVG~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLT---GFSHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH---TCCEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHc---CCCeEEEecCCE
Confidence 46999999999999999999886 666666888754
No 480
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=91.90 E-value=0.44 Score=42.62 Aligned_cols=74 Identities=22% Similarity=0.292 Sum_probs=43.9
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhhCCCCCEEEEe
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~~~~D~V~i~ 81 (376)
+||+||| +|.+|...+..+.... +-..-+.++|+++.....+.++.. ...+++. + ++..+.+++ .|+|+|+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~-~~~~el~L~Di~~~~~G~a~Dl~~-~~~~~~v~~~~~~~~~~~~~~--aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQL-PSGSELSLYDIAPVTPGVAVDLSH-IPTAVKIKGFSGEDATPALEG--ADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHS-CTTEEEEEECSSTTHHHHHHHHHT-SCSSEEEEEECSSCCHHHHTT--CSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCCceEEEEecCCCchhHHHHhhC-CCCCceEEEecCCCcHHHhCC--CCEEEEe
Confidence 5899999 8999998777775531 223445578988632234444442 2222122 2 233345554 8999998
Q ss_pred CCC
Q 017143 82 TPN 84 (376)
Q Consensus 82 t~~ 84 (376)
...
T Consensus 77 ag~ 79 (312)
T 3hhp_A 77 AGV 79 (312)
T ss_dssp CSC
T ss_pred CCC
Confidence 753
No 481
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=91.84 E-value=0.62 Score=41.40 Aligned_cols=75 Identities=19% Similarity=0.163 Sum_probs=54.8
Q ss_pred ceeEEEEeCC--hhhHHHHHHhhhhcCCCcEEEEEeCCC----hhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMG--MMGREHFINLHHLRSQGVSVVCIADPH----LQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G--~~g~~~~~~~~~~~~~~~~~~~v~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
-+||++||=| ++++..+..+..+ +++++-++-.. ++-.+.+++.+++.|..+..++|.++++++ .|+|+
T Consensus 148 gl~va~vGD~~~rva~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~--aDvvy 222 (307)
T 2i6u_A 148 GLRLSYFGDGANNMAHSLLLGGVTA---GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAG--ADVLV 222 (307)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHT---TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTT--CSEEE
T ss_pred CeEEEEECCCCcCcHHHHHHHHHHC---CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcC--CCEEE
Confidence 4899999975 6778888888887 78877655322 222244566677788655678999999987 89999
Q ss_pred EeCCCC
Q 017143 80 VSTPNM 85 (376)
Q Consensus 80 i~t~~~ 85 (376)
.-+.-+
T Consensus 223 ~~~w~s 228 (307)
T 2i6u_A 223 TDTWTS 228 (307)
T ss_dssp ECCSSC
T ss_pred ecceec
Confidence 877643
No 482
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=91.83 E-value=0.17 Score=45.71 Aligned_cols=99 Identities=24% Similarity=0.311 Sum_probs=64.0
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHH---HhcC-----------------CCCCccC
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLA---NAFD-----------------WPLKVFP 64 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~---~~~~-----------------~~~~~~~ 64 (376)
+++||||.|.|.+|+..++.+.+. ++++++|-|.... +...-+- .-+| -+++++.
T Consensus 20 ~~~kVaInGfGrIGr~vlr~l~e~---~~~ivaIndl~d~--~~~a~llkydS~hG~f~~~v~~~~~~l~i~Gk~I~v~~ 94 (356)
T 3hja_A 20 GSMKLAINGFGRIGRNVFKIAFER---GIDIVAINDLTDP--KTLAHLLKYDSTFGVYNKKVESRDGAIVVDGREIKIIA 94 (356)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCH--HHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEEC
T ss_pred CCeEEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCCH--HHhhhhhccccCCCCCCCCEEEcCCEEEECCEEEEEEE
Confidence 469999999999999998888764 7999999987421 1222221 1000 0012222
Q ss_pred --CHHHHhh-CCCCCEEEEeCCCCcc----HHHHHHHHc-CCCCCeEEEecCC
Q 017143 65 --GHQELLD-SGLCDVVVVSTPNMTH----YQILMDIIN-HPKPHHVLVEKPL 109 (376)
Q Consensus 65 --~~~~~l~-~~~~D~V~i~t~~~~h----~~~~~~al~-~~~g~~Vl~EKP~ 109 (376)
+.+++-. +..+|+|+-||.-..- .+.+...++ +| -|-|++.-|.
T Consensus 95 ~~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aG-AkkVVIsaps 146 (356)
T 3hja_A 95 ERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAG-AKKVILTVPA 146 (356)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSC-CSEEEESSCC
T ss_pred cCChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCC-CeEEEECCCC
Confidence 2332211 1258999999988777 777888888 76 4778888885
No 483
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.75 E-value=0.88 Score=37.76 Aligned_cols=88 Identities=19% Similarity=0.187 Sum_probs=53.3
Q ss_pred eeEEEEe-CChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCC---CccCCHHHHhhCCCCCEEEEeC
Q 017143 7 VKYGIIG-MGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPL---KVFPGHQELLDSGLCDVVVVST 82 (376)
Q Consensus 7 ~~v~iiG-~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~D~V~i~t 82 (376)
|||.|+| +|++|+..+..|.+. +.+|+++ +|+++ +..++. .++.. ...+.-.+.+.. +|+|+.+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~---g~~V~~~-~R~~~---~~~~~~--~~~~~~~~D~~d~~~~~~~~--~d~vi~~a 69 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR---GHEVTAI-VRNAG---KITQTH--KDINILQKDIFDLTLSDLSD--QNVVVDAY 69 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT---TCEEEEE-ESCSH---HHHHHC--SSSEEEECCGGGCCHHHHTT--CSEEEECC
T ss_pred CeEEEEcCCchhHHHHHHHHHhC---CCEEEEE-EcCch---hhhhcc--CCCeEEeccccChhhhhhcC--CCEEEECC
Confidence 4799999 599999998888875 6888865 57766 333332 22220 111111145544 89999887
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHh
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARK 125 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~ 125 (376)
..... ....+..-.+.+++++++
T Consensus 70 g~~~~--------------------~~~~~~~~~~~l~~a~~~ 92 (221)
T 3ew7_A 70 GISPD--------------------EAEKHVTSLDHLISVLNG 92 (221)
T ss_dssp CSSTT--------------------TTTSHHHHHHHHHHHHCS
T ss_pred cCCcc--------------------ccchHHHHHHHHHHHHHh
Confidence 65211 123356667777777743
No 484
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=91.67 E-value=0.68 Score=41.74 Aligned_cols=89 Identities=15% Similarity=0.019 Sum_probs=53.7
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCcc---CCHHHHhhC--CCCCEEEEe
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVF---PGHQELLDS--GLCDVVVVS 81 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~--~~~D~V~i~ 81 (376)
.++.|+|+|..|...+..+.+. +. ++ +.|+++++ .+ + ++.+++ -.+ ++.+.+-+. .+.|+|+++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~---g~-v~-vid~~~~~---~~-~-~~~~~~-~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS---EV-FV-LAEDENVR---KK-V-LRSGAN-FVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS---CE-EE-EESCGGGH---HH-H-HHTTCE-EEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEECCcHHHHHHHHHHHhC---Cc-EE-EEeCChhh---hh-H-HhCCcE-EEEeCCCCHHHHHhcChhhccEEEEc
Confidence 4799999999999887777664 55 44 67999884 43 3 234554 222 233333322 458999999
Q ss_pred CCCCccHHHHHHHHcC-CCCCeEEEe
Q 017143 82 TPNMTHYQILMDIINH-PKPHHVLVE 106 (376)
Q Consensus 82 t~~~~h~~~~~~al~~-~~g~~Vl~E 106 (376)
++++..--.+...++. +...+|++.
T Consensus 185 ~~~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 185 LESDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp CSSHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred CCccHHHHHHHHHHHHHCCCCeEEEE
Confidence 9976443344344332 112356664
No 485
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.66 E-value=0.71 Score=40.71 Aligned_cols=84 Identities=18% Similarity=0.186 Sum_probs=49.8
Q ss_pred ceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCCh------hhHHHHHHHHHhcCCCC--CccC---CHHHHhhCC
Q 017143 6 TVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHL------QSRQQALKLANAFDWPL--KVFP---GHQELLDSG 73 (376)
Q Consensus 6 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~------~~~~~~~~~~~~~~~~~--~~~~---~~~~~l~~~ 73 (376)
+.+|.|+|+ |.+|...+..|.+. +.++++ .+|+. ++.+..+.+. ..++.+ --++ ++.++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~-l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~~- 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL---GHPTFL-LVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKN- 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT---TCCEEE-ECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHT-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC---CCCEEE-EECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHcC-
Confidence 467999995 99999999888875 577775 45653 2211122222 224321 1122 35566664
Q ss_pred CCCEEEEeCCCC---ccHHHHHHHHc
Q 017143 74 LCDVVVVSTPNM---THYQILMDIIN 96 (376)
Q Consensus 74 ~~D~V~i~t~~~---~h~~~~~~al~ 96 (376)
+|+|+.++... ....++..|.+
T Consensus 78 -~d~vi~~a~~~~~~~~~~l~~aa~~ 102 (308)
T 1qyc_A 78 -VDVVISTVGSLQIESQVNIIKAIKE 102 (308)
T ss_dssp -CSEEEECCCGGGSGGGHHHHHHHHH
T ss_pred -CCEEEECCcchhhhhHHHHHHHHHh
Confidence 89999888742 34455555555
No 486
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=91.66 E-value=1.1 Score=41.96 Aligned_cols=113 Identities=16% Similarity=0.201 Sum_probs=70.4
Q ss_pred CceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCC----------ChhhHHHHHHHHHhcCCCCCc-----cCCHHHH
Q 017143 5 DTVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADP----------HLQSRQQALKLANAFDWPLKV-----FPGHQEL 69 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~----------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 69 (376)
+..||+|.|.|.+|...+..|.+. +.++++|+|. +.+ .+.++.++.+- +.. +-+.+++
T Consensus 234 ~g~~vaVqGfGnVG~~~a~~L~e~---GakvVavsD~~G~i~dp~Gld~~---~l~~~~~~~g~-i~~y~~a~~i~~~ei 306 (440)
T 3aog_A 234 EGARVAIQGFGNVGNAAARAFHDH---GARVVAVQDHTGTVYNEAGIDPY---DLLRHVQEFGG-VRGYPKAEPLPAADF 306 (440)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCEEECTTCCCHH---HHHHHHHHTSS-STTCTTSEECCHHHH
T ss_pred cCCEEEEeccCHHHHHHHHHHHHC---CCEEEEEEcCCcEEECCCCCCHH---HHHHHHHhcCC-cccCCCceEcCchhh
Confidence 357999999999999888777775 8999999998 444 45555555441 112 2245677
Q ss_pred hhCCCCCEEEEeCCC-CccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 017143 70 LDSGLCDVVVVSTPN-MTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVG 134 (376)
Q Consensus 70 l~~~~~D~V~i~t~~-~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~ 134 (376)
+.. ++|+++=|+.. ..+.+-+.+ |+ ..+++|--=.....++.++.+ ++ |+.+...
T Consensus 307 ~~~-~~DIlvPcA~~n~i~~~na~~-l~----ak~VvEgAN~p~t~eA~~iL~---~~-GI~~~PD 362 (440)
T 3aog_A 307 WGL-PVEFLVPAALEKQITEQNAWR-IR----ARIVAEGANGPTTPAADDILL---EK-GVLVVPD 362 (440)
T ss_dssp TTC-CCSEEEECSSSSCBCTTTGGG-CC----CSEEECCSSSCBCHHHHHHHH---HH-TCEEECH
T ss_pred hcC-CCcEEEecCCcCccchhhHHH-cC----CcEEEecCccccCHHHHHHHH---HC-CCEEECh
Confidence 764 59999988664 344333322 23 357777622222266776664 33 6665533
No 487
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.60 E-value=0.87 Score=41.48 Aligned_cols=136 Identities=7% Similarity=0.016 Sum_probs=75.9
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC-------CHHHHhh------C
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP-------GHQELLD------S 72 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~------~ 72 (376)
-+|.|+|+ |.+|...+...+.. +.+++++++.... .....++++++|.+ .+++ ++.+.+. .
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~---Ga~vi~~~~~~~~-~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLL---NFNSISVIRDRPN-LDEVVASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHH---TCEEEEEECCCTT-HHHHHHHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred cEEEECCCCcHHHHHHHHHHHHC---CCEEEEEecCccc-cHHHHHHHHhcCCe-EEEecCccchHHHHHHHHHHhhccC
Confidence 47999997 99999877766655 7788888743322 11122344567765 2222 2222221 2
Q ss_pred CCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEec----CCCCCHHHHHHHHHHHHhCCCeEEEEeecccc--------C
Q 017143 73 GLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEK----PLCTTVADCKKVVDAARKRPDILVQVGLEYRY--------M 140 (376)
Q Consensus 73 ~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EK----P~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~--------~ 140 (376)
..+|+|+-++....-. .+.++++. .|+-|++-- +...+.. ... .+ ++.+.-.+...+ .
T Consensus 244 ~g~Dvvid~~G~~~~~-~~~~~l~~-~G~~v~~g~~~~~~~~~~~~------~~~-~~-~~~~~g~~~~~~~~~~~~~~~ 313 (364)
T 1gu7_A 244 GEAKLALNCVGGKSST-GIARKLNN-NGLMLTYGGMSFQPVTIPTS------LYI-FK-NFTSAGFWVTELLKNNKELKT 313 (364)
T ss_dssp CCEEEEEESSCHHHHH-HHHHTSCT-TCEEEECCCCSSCCEEECHH------HHH-HS-CCEEEECCHHHHHTTCHHHHH
T ss_pred CCceEEEECCCchhHH-HHHHHhcc-CCEEEEecCCCCCCcccCHH------HHh-hc-CcEEEEEchhHhcccCHHHHH
Confidence 3589999999754433 55677774 366666533 2223332 223 23 444433222211 2
Q ss_pred HHHHHHHHHHHcCCCCc
Q 017143 141 PPVAKLIQIVKSGSIGQ 157 (376)
Q Consensus 141 p~~~~~k~~i~~g~iG~ 157 (376)
..+..+.+++++|.|--
T Consensus 314 ~~~~~~~~l~~~g~l~~ 330 (364)
T 1gu7_A 314 STLNQIIAWYEEGKLTD 330 (364)
T ss_dssp HHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHcCCccc
Confidence 35677888888887743
No 488
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=91.51 E-value=0.044 Score=51.24 Aligned_cols=78 Identities=13% Similarity=0.084 Sum_probs=52.1
Q ss_pred ceeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHh--hCCCCCEEEEeCC
Q 017143 6 TVKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELL--DSGLCDVVVVSTP 83 (376)
Q Consensus 6 ~~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~D~V~i~t~ 83 (376)
..++.|+|+|..|+..+..+.+ .++++++++|.++.+.. . .-.|+| ++. .+++. ...+++.|+|+.
T Consensus 52 ~~~v~IiGAG~~G~~l~~~l~~---~g~~ivgfiDdd~~~~g--~---~i~Gip--V~~-~~~l~~~~~~~~~~viiai- 119 (409)
T 2py6_A 52 ATRLVILGTKGFGAHLMNVRHE---RPCEVIAAVDDFRYHSG--E---LYYGLP--IIS-TDRFTELATHDRDLVALNT- 119 (409)
T ss_dssp GCEEEEECSSSTHHHHHSCSSS---CSSEEEEEECTTTTTSC--C---EETTEE--EEC-HHHHHHHHHTCTTEEEEEC-
T ss_pred CCeEEEEeCCHHHHHHHHHHHH---CCCEEEEEEeCCccccc--C---EECCEE--EEC-HHHHHHHHhCCCCEEEEec-
Confidence 4579999999999988776654 47999999998765211 1 123665 554 34443 345578888888
Q ss_pred CCccHHHHHHHHc
Q 017143 84 NMTHYQILMDIIN 96 (376)
Q Consensus 84 ~~~h~~~~~~al~ 96 (376)
....+++..+.+
T Consensus 120 -~~r~~i~~~l~~ 131 (409)
T 2py6_A 120 -CRYDGPKRFFDQ 131 (409)
T ss_dssp -CCSHHHHHHHHH
T ss_pred -cHHHHHHHHHHh
Confidence 455666666654
No 489
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=91.44 E-value=0.76 Score=40.82 Aligned_cols=76 Identities=21% Similarity=0.095 Sum_probs=54.0
Q ss_pred ceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeC----CChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEE
Q 017143 6 TVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIAD----PHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVV 80 (376)
Q Consensus 6 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i 80 (376)
.+||++||= +++++..+..+..+ +++++.++- ++++-.+.+++.+++.|..+..++|.+++++. .|+|+.
T Consensus 146 gl~va~vGD~~~va~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvyt 220 (307)
T 3tpf_A 146 IAKVAFIGDSNNMCNSWLITAAIL---GFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKD--KDVVIT 220 (307)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEEEE
T ss_pred CCEEEEEcCCCccHHHHHHHHHHc---CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEe
Confidence 589999995 55677788888887 788776552 22232345566666777655678999999987 899998
Q ss_pred eCCCCc
Q 017143 81 STPNMT 86 (376)
Q Consensus 81 ~t~~~~ 86 (376)
-+..+.
T Consensus 221 ~~w~sm 226 (307)
T 3tpf_A 221 DTWVSM 226 (307)
T ss_dssp CCSSCT
T ss_pred cCcccC
Confidence 775443
No 490
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=91.42 E-value=0.59 Score=41.86 Aligned_cols=75 Identities=16% Similarity=0.159 Sum_probs=54.1
Q ss_pred ceeEEEEeCC--hhhHHHHHHhhhhcCCCcEEEEEeCC----ChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMG--MMGREHFINLHHLRSQGVSVVCIADP----HLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G--~~g~~~~~~~~~~~~~~~~~~~v~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
-+||++||=| ++++..+..+..+ +++++-++-. +++-.+.+++.+++.|..+..++|.++++++ .|+|+
T Consensus 167 gl~va~vGD~~~rva~Sl~~~~~~~---G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDvvy 241 (325)
T 1vlv_A 167 GVKVVFMGDTRNNVATSLMIACAKM---GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAG--ADVVY 241 (325)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHT---TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTT--CSEEE
T ss_pred CcEEEEECCCCcCcHHHHHHHHHHC---CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHcc--CCEEE
Confidence 4899999985 6778888888887 7887755422 2222244566777778555578999999987 89998
Q ss_pred EeCCCC
Q 017143 80 VSTPNM 85 (376)
Q Consensus 80 i~t~~~ 85 (376)
.-+.-+
T Consensus 242 t~~w~s 247 (325)
T 1vlv_A 242 TDVWAS 247 (325)
T ss_dssp ECCCC-
T ss_pred eccccc
Confidence 877644
No 491
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=91.41 E-value=0.67 Score=41.64 Aligned_cols=126 Identities=9% Similarity=-0.006 Sum_probs=76.6
Q ss_pred ceeEEEEeCC--hhhHHHHHHhhhhcCCCcEEEEEeCC----ChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMG--MMGREHFINLHHLRSQGVSVVCIADP----HLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G--~~g~~~~~~~~~~~~~~~~~~~v~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
-++|++||=| ++++..+..+..+ +++++.++-. +++-.+.+++.+++.|..+..++|.+++++. .|+|+
T Consensus 155 gl~ia~vGD~~~~va~Sl~~~~~~~---G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDvvy 229 (333)
T 1duv_G 155 EMTLVYAGDARNNMGNSMLEAAALT---GLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEG--ADFIY 229 (333)
T ss_dssp GCEEEEESCTTSHHHHHHHHHHHHH---CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTT--CSEEE
T ss_pred CcEEEEECCCccchHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCC--CCEEE
Confidence 4899999975 7888888888887 7887755522 2222245667777888555578999999987 89999
Q ss_pred EeCCCCccHH---HHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhCCCeEEEEeeccccCHHHHHHHHHH
Q 017143 80 VSTPNMTHYQ---ILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKRPDILVQVGLEYRYMPPVAKLIQIV 150 (376)
Q Consensus 80 i~t~~~~h~~---~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~~v~~~~r~~p~~~~~k~~i 150 (376)
.-+.-+.-.+ ...+ .+ . =+|...|.+ +.+.+ .+.+..+|-......+.....-+..+
T Consensus 230 td~w~smg~~~~~~~er-~~------~--~~~y~v~~~----ll~~a-~~~~ai~mHcLP~~h~~~t~~~~~~~ 289 (333)
T 1duv_G 230 TDVWVSMGEAKEKWAER-IA------L--LREYQVNSK----MMQLT-GNPEVKFLHCLPAFHDDQTTLGKKMA 289 (333)
T ss_dssp ECCSSCTTSCTTHHHHH-HH------H--HGGGCBCHH----HHHTT-CCTTCEEEECSCCCCSSCSHHHHHHH
T ss_pred eCCccccCccccchHHH-HH------H--hhccccCHH----HHHhc-cCCCcEEECCCCCCCccccccchhhh
Confidence 8776432110 0000 00 0 034555554 34444 24567777766655444444444333
No 492
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=91.25 E-value=0.76 Score=41.67 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=77.5
Q ss_pred ceeEEEEeCC--hhhHHHHHHhhhhcCCCcEEEEEeCC----ChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEE
Q 017143 6 TVKYGIIGMG--MMGREHFINLHHLRSQGVSVVCIADP----HLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVV 79 (376)
Q Consensus 6 ~~~v~iiG~G--~~g~~~~~~~~~~~~~~~~~~~v~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~ 79 (376)
-++|++||=| ++++..+..+..+ +++++.++-. +++-.+.+++.+++.|..+..++|.+++++. .|+|+
T Consensus 176 gl~va~vGD~~~rva~Sl~~~~~~l---G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDvvy 250 (359)
T 2w37_A 176 GLTLTFMGDGRNNVANSLLVTGAIL---GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKG--SNVVY 250 (359)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHH---TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTT--CSEEE
T ss_pred CeEEEEECCCccchHHHHHHHHHHc---CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcC--CCEEE
Confidence 4899999975 7788888888887 7887755422 2222245666777788655678999999987 89988
Q ss_pred EeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHHHhC--CCeEEEEeeccccCHHHHHHHHHHH
Q 017143 80 VSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAARKR--PDILVQVGLEYRYMPPVAKLIQIVK 151 (376)
Q Consensus 80 i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a~~~--~~~~~~v~~~~r~~p~~~~~k~~i~ 151 (376)
.-+.-+.-.+-..+-.+ .+ +|...|.+ +.+.+ ++ .+.++|-......+.....-+++-+
T Consensus 251 td~w~smg~ee~~er~~------~~--~~y~v~~e----ll~~a-k~~~~dai~MHcLP~~h~~~t~~g~~~~~ 311 (359)
T 2w37_A 251 TDVWVSMGESNWEERVK------EL--TPYQVNME----AMKKT-GTPDDQLIFMHCLPAFHNTDTQYGKEIKE 311 (359)
T ss_dssp ECCSCCTTCTTHHHHHH------HH--GGGCBCHH----HHHTT-CCCGGGCEEEECSCCCCSSCSHHHHHHHH
T ss_pred EcccccccccchHHHHH------Hh--hccccCHH----HHHhh-CCCCCCEEEECCCCCCcccccccchhhhh
Confidence 87764321110000001 00 35555554 44555 31 3667777666655555555554443
No 493
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.24 E-value=0.18 Score=44.88 Aligned_cols=130 Identities=13% Similarity=0.106 Sum_probs=71.6
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccC--CHHHHhhC-CCCCEEEEeC
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFP--GHQELLDS-GLCDVVVVST 82 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~-~~~D~V~i~t 82 (376)
-+|.|+|+ |.+|...+..++.. +.+++++ ++++++++. ++++|.. ..++ +.+++.+. ..+|+|+- +
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~---Ga~Vi~~-~~~~~~~~~----~~~~ga~-~~~~~~~~~~~~~~~~~~d~vid-~ 196 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAM---GLRVLAA-ASRPEKLAL----PLALGAE-EAATYAEVPERAKAWGGLDLVLE-V 196 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT---TCEEEEE-ESSGGGSHH----HHHTTCS-EEEEGGGHHHHHHHTTSEEEEEE-C
T ss_pred CEEEEECCCcHHHHHHHHHHHHC---CCEEEEE-eCCHHHHHH----HHhcCCC-EEEECCcchhHHHHhcCceEEEE-C
Confidence 47999998 99999877766664 6787765 566664433 3456654 2222 20222221 35899999 7
Q ss_pred CCCccHHHHHHHHcCCCCCeEEEecCC----CCCHHHHHHHHHHHHhCCCeEEEEeecc----ccCHHHHHHHH---HHH
Q 017143 83 PNMTHYQILMDIINHPKPHHVLVEKPL----CTTVADCKKVVDAARKRPDILVQVGLEY----RYMPPVAKLIQ---IVK 151 (376)
Q Consensus 83 ~~~~h~~~~~~al~~~~g~~Vl~EKP~----a~~~~e~~~l~~~a~~~~~~~~~v~~~~----r~~p~~~~~k~---~i~ 151 (376)
.. .....+.++++. .|+-|.+-.+. ..+. .... .+ ++.+. +... .....+..+.+ +++
T Consensus 197 g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~------~~~~-~~-~~~~~-g~~~~~~~~~~~~~~~~~~~~~l~~ 265 (302)
T 1iz0_A 197 RG-KEVEESLGLLAH-GGRLVYIGAAEGEVAPIPP------LRLM-RR-NLAVL-GFWLTPLLREGALVEEALGFLLPRL 265 (302)
T ss_dssp SC-TTHHHHHTTEEE-EEEEEEC-------CCCCT------THHH-HT-TCEEE-ECCHHHHTTCHHHHHHHHHHHGGGB
T ss_pred CH-HHHHHHHHhhcc-CCEEEEEeCCCCCCCCcCH------HHHH-hC-CCeEE-EEeccchhhhHHHHHHHHhhhHHHH
Confidence 76 566777777773 25555443221 1121 1223 23 44433 3322 12345666777 787
Q ss_pred cCCCCc
Q 017143 152 SGSIGQ 157 (376)
Q Consensus 152 ~g~iG~ 157 (376)
+|++-.
T Consensus 266 ~g~l~~ 271 (302)
T 1iz0_A 266 GRELRP 271 (302)
T ss_dssp TTTBCC
T ss_pred cCCccc
Confidence 887743
No 494
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=91.21 E-value=0.31 Score=43.69 Aligned_cols=73 Identities=15% Similarity=0.259 Sum_probs=43.5
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCC--ChhhHH-HHHHHHH---hcCCCCCcc--C-CHHHHhhCCCCC
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADP--HLQSRQ-QALKLAN---AFDWPLKVF--P-GHQELLDSGLCD 76 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~--~~~~~~-~~~~~~~---~~~~~~~~~--~-~~~~~l~~~~~D 76 (376)
+||+|+|+ |++|...+..+... +.+.-+.++|+ ++++.+ .+..+.. ..+.++... + ++.+.+++ .|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~g--aD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE--PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDE--SD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC--TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTT--CS
T ss_pred CEEEEECCCChhHHHHHHHHHhC--CCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCC--CC
Confidence 48999999 99999888877664 33333557888 654322 1222321 122222222 2 24666765 89
Q ss_pred EEEEeCC
Q 017143 77 VVVVSTP 83 (376)
Q Consensus 77 ~V~i~t~ 83 (376)
+|+++.-
T Consensus 77 ~Vi~~Ag 83 (313)
T 1hye_A 77 VVIITSG 83 (313)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9998874
No 495
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=91.18 E-value=1.1 Score=40.56 Aligned_cols=140 Identities=18% Similarity=0.148 Sum_probs=75.4
Q ss_pred eeEEEEeC-ChhhHHHHHHhhhhcCCCc-EEEEEeCCChhhHHHHHHHHHhcCCCCCc--c--CCHHHHhhC---CCCCE
Q 017143 7 VKYGIIGM-GMMGREHFINLHHLRSQGV-SVVCIADPHLQSRQQALKLANAFDWPLKV--F--PGHQELLDS---GLCDV 77 (376)
Q Consensus 7 ~~v~iiG~-G~~g~~~~~~~~~~~~~~~-~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~---~~~D~ 77 (376)
-+|.|+|+ |.+|...+..++.. +. ++++ +++++++ .+.+.+++|.. .. + .++.+.+.+ ..+|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~---Ga~~Vi~-~~~~~~~---~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL---GCSRVVG-ICGTHEK---CILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT---TCSEEEE-EESCHHH---HHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHC---CCCeEEE-EeCCHHH---HHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCE
Confidence 57999998 99999887777664 77 7775 4566653 33333446654 11 1 233333321 15899
Q ss_pred EEEeCCCCccHHHHHHHHcCCCCCeEEEecCC----CCCHH--HHH-HHHHHHHhCCCeEEEEeecccc----CHHHHHH
Q 017143 78 VVVSTPNMTHYQILMDIINHPKPHHVLVEKPL----CTTVA--DCK-KVVDAARKRPDILVQVGLEYRY----MPPVAKL 146 (376)
Q Consensus 78 V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~----a~~~~--e~~-~l~~~a~~~~~~~~~v~~~~r~----~p~~~~~ 146 (376)
|+-++.. .....+.++++. .|+-|++--+- ..+.. ... -+.... .+ ++.+.-.+...| ...+..+
T Consensus 234 vi~~~G~-~~~~~~~~~l~~-~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~i~g~~~~~~~~~~~~~~~~~ 309 (357)
T 2zb4_A 234 YFDNVGG-NISDTVISQMNE-NSHIILCGQISQYNKDVPYPPPLSPAIEAIQK-ER-NITRERFLVLNYKDKFEPGILQL 309 (357)
T ss_dssp EEESCCH-HHHHHHHHTEEE-EEEEEECCCGGGTTSCCCSSCCCCHHHHHHHH-HH-TCEEEECCGGGGGGGHHHHHHHH
T ss_pred EEECCCH-HHHHHHHHHhcc-CcEEEEECCccccccCccccccchhhhhhhhh-cc-eeEEEEeehhhhhHHHHHHHHHH
Confidence 9999874 445566667763 26555553221 11100 000 011222 22 333332222222 3456778
Q ss_pred HHHHHcCCCCce
Q 017143 147 IQIVKSGSIGQV 158 (376)
Q Consensus 147 k~~i~~g~iG~i 158 (376)
.+++++|+|--.
T Consensus 310 ~~l~~~g~l~~~ 321 (357)
T 2zb4_A 310 SQWFKEGKLKIK 321 (357)
T ss_dssp HHHHHTTCCCCC
T ss_pred HHHHHcCCCcCc
Confidence 888888887543
No 496
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=91.10 E-value=0.16 Score=44.91 Aligned_cols=70 Identities=24% Similarity=0.256 Sum_probs=45.8
Q ss_pred eeEEEEeCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCC--------CCCccCCHHHHhhCCCCCEE
Q 017143 7 VKYGIIGMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDW--------PLKVFPGHQELLDSGLCDVV 78 (376)
Q Consensus 7 ~~v~iiG~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~D~V 78 (376)
.++.|+|+|.+|+..+..|.+. + +|+ +++++.++ +++++++++. .+.. .++.+.+. ++|+|
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~---G-~V~-v~~r~~~~---~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~--~~Dil 197 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD---N-NII-IANRTVEK---AEALAKEIAEKLNKKFGEEVKF-SGLDVDLD--GVDII 197 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS---S-EEE-EECSSHHH---HHHHHHHHHHHHTCCHHHHEEE-ECTTCCCT--TCCEE
T ss_pred CEEEEECchHHHHHHHHHHHHC---C-CEE-EEECCHHH---HHHHHHHHhhhcccccceeEEE-eeHHHhhC--CCCEE
Confidence 5799999999999988888876 5 655 78998874 4444443211 0011 12223333 48999
Q ss_pred EEeCCCCcc
Q 017143 79 VVSTPNMTH 87 (376)
Q Consensus 79 ~i~t~~~~h 87 (376)
+.+++...+
T Consensus 198 Vn~ag~~~~ 206 (287)
T 1nvt_A 198 INATPIGMY 206 (287)
T ss_dssp EECSCTTCT
T ss_pred EECCCCCCC
Confidence 999997654
No 497
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=91.09 E-value=0.83 Score=40.59 Aligned_cols=90 Identities=17% Similarity=0.158 Sum_probs=53.9
Q ss_pred ceeEEEEeC-ChhhHHHHHHhhhhcCCCcEEEEEeCCCh------hhHHHHHHHHHhcCCCC--CccC---CHHHHhhCC
Q 017143 6 TVKYGIIGM-GMMGREHFINLHHLRSQGVSVVCIADPHL------QSRQQALKLANAFDWPL--KVFP---GHQELLDSG 73 (376)
Q Consensus 6 ~~~v~iiG~-G~~g~~~~~~~~~~~~~~~~~~~v~d~~~------~~~~~~~~~~~~~~~~~--~~~~---~~~~~l~~~ 73 (376)
+++|.|+|. |.+|...+..|.+. +.+|+++ +|++ ++.+..+.+. ..++.+ --++ +++++++.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~-~R~~~~~~~~~~~~~l~~~~-~~~v~~v~~D~~d~~~l~~a~~~- 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF---SHPTFIY-ARPLTPDSTPSSVQLREEFR-SMGVTIIEGEMEEHEKMVSVLKQ- 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT---TCCEEEE-ECCCCTTCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHTT-
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC---CCcEEEE-ECCcccccChHHHHHHHHhh-cCCcEEEEecCCCHHHHHHHHcC-
Confidence 468999995 99999999888875 6787765 4554 2222222222 223321 1122 35566654
Q ss_pred CCCEEEEeCCC---CccHHHHHHHHcCCCC--CeEE
Q 017143 74 LCDVVVVSTPN---MTHYQILMDIINHPKP--HHVL 104 (376)
Q Consensus 74 ~~D~V~i~t~~---~~h~~~~~~al~~~~g--~~Vl 104 (376)
+|+|+.+... .....++..|.+ +| ++++
T Consensus 78 -~d~vi~~a~~~~~~~~~~l~~aa~~--~g~v~~~v 110 (321)
T 3c1o_A 78 -VDIVISALPFPMISSQIHIINAIKA--AGNIKRFL 110 (321)
T ss_dssp -CSEEEECCCGGGSGGGHHHHHHHHH--HCCCCEEE
T ss_pred -CCEEEECCCccchhhHHHHHHHHHH--hCCccEEe
Confidence 8999988764 345556666666 44 4554
No 498
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.04 E-value=0.54 Score=42.54 Aligned_cols=78 Identities=9% Similarity=0.094 Sum_probs=61.8
Q ss_pred HHHHHHHHhcCCC--CCccCCH-HHHhhCCCCCEEEEeCCCCccHHHHHHHHcCCCCCeEEEecCCCCCHHHHHHHHHHH
Q 017143 47 QQALKLANAFDWP--LKVFPGH-QELLDSGLCDVVVVSTPNMTHYQILMDIINHPKPHHVLVEKPLCTTVADCKKVVDAA 123 (376)
Q Consensus 47 ~~~~~~~~~~~~~--~~~~~~~-~~~l~~~~~D~V~i~t~~~~h~~~~~~al~~~~g~~Vl~EKP~a~~~~e~~~l~~~a 123 (376)
....+.++++|++ ...|+.- -+++++.++|+.=|++.+-.++++.+++.+ .||+|++-.-++ |.+|...-++..
T Consensus 94 ~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~--~gkPviLstGma-t~~Ei~~Ave~i 170 (349)
T 2wqp_A 94 IKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVAS--FGKPIILSTGMN-SIESIKKSVEII 170 (349)
T ss_dssp HHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCC-CHHHHHHHHHHH
Confidence 4566778889987 1334321 245555568999999999999999999999 899999999997 999999999888
Q ss_pred HhCC
Q 017143 124 RKRP 127 (376)
Q Consensus 124 ~~~~ 127 (376)
...+
T Consensus 171 ~~~G 174 (349)
T 2wqp_A 171 REAG 174 (349)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 6543
No 499
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=91.03 E-value=1.9 Score=36.22 Aligned_cols=81 Identities=12% Similarity=0.130 Sum_probs=43.6
Q ss_pred CceeEEEEeCChhhHHHHHHh-hhhc--CCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCccCCHHHHhhCCCCCEEEEe
Q 017143 5 DTVKYGIIGMGMMGREHFINL-HHLR--SQGVSVVCIADPHLQSRQQALKLANAFDWPLKVFPGHQELLDSGLCDVVVVS 81 (376)
Q Consensus 5 ~~~~v~iiG~G~~g~~~~~~~-~~~~--~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~ 81 (376)
+.+|||||=+|++|...+-.| ...+ .+++++.-+.+-..-.-+.++..... .-++.++-++|.|++.
T Consensus 2 mvvKiGiiKlGNigts~~idl~LDErAdRedI~vrv~gsGaKm~pe~~~~~~~~----------~~~~~~~~~pDfvI~i 71 (283)
T 1qv9_A 2 TVAKAIFIKCGNLGTSMMMDMLLDERADREDVEFRVVGTSVKMDPECVEAAVEM----------ALDIAEDFEPDFIVYG 71 (283)
T ss_dssp CCEEEEEEECSCCHHHHHTTGGGSTTSCCSSEEEEEEECTTCCSHHHHHHHHHH----------HHHHHHHHCCSEEEEE
T ss_pred eeEEEEEEEecccchHHHHHHHHHhhhccCCceEEEeccCCCCCHHHHHHHHHH----------hhhhhhhcCCCEEEEE
Confidence 479999999999998655443 2222 25777665544322211122221110 0011133359999999
Q ss_pred CCCCcc--HHHHHHHH
Q 017143 82 TPNMTH--YQILMDII 95 (376)
Q Consensus 82 t~~~~h--~~~~~~al 95 (376)
+||..- ..-+++.|
T Consensus 72 sPN~a~PGP~~ARE~l 87 (283)
T 1qv9_A 72 GPNPAAPGPSKAREML 87 (283)
T ss_dssp CSCTTSHHHHHHHHHH
T ss_pred CCCCCCCCchHHHHHH
Confidence 998543 23344444
No 500
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=91.02 E-value=0.61 Score=38.99 Aligned_cols=86 Identities=12% Similarity=0.100 Sum_probs=49.8
Q ss_pred eEEEE--eCChhhHHHHHHhhhhcCCCcEEEEEeCCChhhHHHHHHHHHhcCCCCCc-----cCC-------HHHHhhCC
Q 017143 8 KYGII--GMGMMGREHFINLHHLRSQGVSVVCIADPHLQSRQQALKLANAFDWPLKV-----FPG-------HQELLDSG 73 (376)
Q Consensus 8 ~v~ii--G~G~~g~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~-------~~~~l~~~ 73 (376)
||+|+ |.|..-+..+..++.. ..+.++++|+...++. ...+.|+++|+|+.. +.+ +.+.|+..
T Consensus 2 riaVl~SG~Gs~L~aLi~~~~~~-~~~~~I~~Vvs~~~~~--~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~ 78 (209)
T 1meo_A 2 RVAVLISGTGSNLQALIDSTREP-NSSAQIDIVISNKAAV--AGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEF 78 (209)
T ss_dssp EEEEEESSSCTTHHHHHHHHHST-TCSCEEEEEEESSTTC--HHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHT
T ss_pred eEEEEEECCchHHHHHHHHHhcC-CCCcEEEEEEeCCCCh--HHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHhc
Confidence 66666 4554444444444432 1368999888654443 456788999998321 222 23445556
Q ss_pred CCCEEEEeCCCCccHHHHHHHHc
Q 017143 74 LCDVVVVSTPNMTHYQILMDIIN 96 (376)
Q Consensus 74 ~~D~V~i~t~~~~h~~~~~~al~ 96 (376)
++|+++++.....=.+-++.+.+
T Consensus 79 ~~Dliv~a~y~~il~~~~l~~~~ 101 (209)
T 1meo_A 79 SIDIVCLAGFMRILSGPFVQKWN 101 (209)
T ss_dssp TCCEEEEESCCSCCCHHHHHHTT
T ss_pred CCCEEEEcchhhhCCHHHHhhhc
Confidence 79999998865433333444443
Done!