BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017145
(376 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/376 (65%), Positives = 296/376 (78%), Gaps = 24/376 (6%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME E VELFD AKKAAD++ D VSS GPEV+RCVD+LK+L+ F VT ++LVSTQVGK+L
Sbjct: 1 MEMEFVELFDEAKKAADASLNDDVSSSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKKL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPL KHP+EKI+ VAS+LL++WKK+VI+ET KKNGS KSSV V K ++ K++K+
Sbjct: 61 RPLAKHPKEKIRAVASDLLEMWKKMVIDET--RKKNGSIDSKSSVKAEVSKSETVKVEKL 118
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
+KTS VKVE+ ST+ETVKVEK MD+ + VKVEK+ ++E
Sbjct: 119 RKTSVVKVERASTSETVKVEK----------------------MDQDKTVKVEKMSKQEI 156
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
Q SV++PSQ I PKL L+KCND+ RDKIRELLA ALSKV SEADE+I DEV ACDP
Sbjct: 157 QTSSVKQPSQSPIGPPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDP 216
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
IRVAVSVES+MFEKLGRS GA+KLKYRSIMFNI+D+ NPD R++VLLGEV PERLVTM P
Sbjct: 217 IRVAVSVESMMFEKLGRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGP 276
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EEMAS++R+R+ IKEK LF+C+R G+A ATTDQFKC RC QRKCTYYQMQTRSADEPM
Sbjct: 277 EEMASEQRKRENNQIKEKVLFDCERSGQAQATTDQFKCGRCRQRKCTYYQMQTRSADEPM 336
Query: 361 TTYVTCVNCSKRWKFC 376
TTYVTCVNC+ WKFC
Sbjct: 337 TTYVTCVNCNNHWKFC 352
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/384 (65%), Positives = 296/384 (77%), Gaps = 25/384 (6%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVELF++AKKAAD+AA DGVSS GPEV RCVDALK+LKSFPVTY+ L STQVGKRL
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R LTKHP+ KIQ +AS+LL++WKK+VI+ET RNKKNG + S V K ++ K++
Sbjct: 61 RHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKKNGGLDNNGSAKAEVSKTETVKVEMA 119
Query: 121 QKTSAVKVEKVSTAETVKVEK--------TGSVSRSETVQVEKKETNGDSVMDRGEAVKV 172
K VKVEK S ETVK+EK GSVSRSET++VEK+ N
Sbjct: 120 HKAGGVKVEKASKVETVKIEKFDRGSSTKPGSVSRSETIKVEKRVEN------------- 166
Query: 173 EKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEII 232
++E KQ SV+KP Q + PKLT +IKCND+ RDK+RELLA AL KV SEADE+I
Sbjct: 167 ---VDERKQFSSVKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIK 223
Query: 233 DEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTP 292
DEVNACDPIRVAVSVESVMFEK+GRS G +K KYRSIMFNI+D NPDLR++VLLGEV P
Sbjct: 224 DEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKP 283
Query: 293 ERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQ 352
+RL+ MSPEEMAS++RQR+ IKEKALF+C+RGG ATTDQFKC RCGQRK TYYQ+Q
Sbjct: 284 DRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQ 343
Query: 353 TRSADEPMTTYVTCVNCSKRWKFC 376
TRSADEPMTT+VTCVNC+ WKFC
Sbjct: 344 TRSADEPMTTFVTCVNCNNHWKFC 367
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/376 (67%), Positives = 295/376 (78%), Gaps = 34/376 (9%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVELF+AAKKAAD+AA DGVSS GPEV RCVDALK+LK FP++YD+LVS+QVGKRL
Sbjct: 1 MERELVELFEAAKKAADAAASDGVSSNGPEVVRCVDALKQLKIFPISYDILVSSQVGKRL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPLTKHPREKIQ VAS+LL++WKKIVI+ETTR KKNG+ +KSSV +V
Sbjct: 61 RPLTKHPREKIQTVASDLLEMWKKIVIDETTR-KKNGTVDNKSSVKA-----------EV 108
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
K +KVEKV A TVKVEK +DR VKVEK EE++
Sbjct: 109 SKVETIKVEKVQKASTVKVEK----------------------IDRERTVKVEKKSEEKQ 146
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
QA V+KPSQ ++ PKLT ++KCND+ RDKIRELL ALSKV SEA+E+ DE++ CDP
Sbjct: 147 QAIDVKKPSQASVTPPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGRDEISKCDP 206
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
IRVAVSVES MFEK+GRS GA+K KYRSIMFN++D NPDLR++VLLGEV PERL++M+P
Sbjct: 207 IRVAVSVESAMFEKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTP 266
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EEMAS ERQ +I IKEKALF+C+RGG A ATTDQFKCSRCGQRKCTYYQMQTRSADEPM
Sbjct: 267 EEMASKERQEEINQIKEKALFDCERGGPAKATTDQFKCSRCGQRKCTYYQMQTRSADEPM 326
Query: 361 TTYVTCVNCSKRWKFC 376
TTYVTCVNC+K WKFC
Sbjct: 327 TTYVTCVNCNKHWKFC 342
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/376 (64%), Positives = 286/376 (76%), Gaps = 42/376 (11%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVELFD AKKAAD++ D SS GPEVSRCVD+LK+L+ F VT ++LVSTQVGK+L
Sbjct: 1 MEKELVELFDKAKKAADASLNDDKSSSGPEVSRCVDSLKQLRKFKVTSEILVSTQVGKKL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPL KHP++KI+ VAS+LL+ WKKIVI+ET R KKN + K++K+
Sbjct: 61 RPLAKHPKDKIRAVASDLLETWKKIVIDETMR-KKNATV----------------KVEKL 103
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
QKTS V KVST+ETVKVEK MD+ + VKV + +EE
Sbjct: 104 QKTSMV---KVSTSETVKVEK----------------------MDQDKTVKVAQTCKEEI 138
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
Q SV+KPSQ PKL L+KCND+ RDKIRELLA ALSKV SEADE+I DEV ACDP
Sbjct: 139 QTSSVKKPSQAPTGPPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDP 198
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
IRVAVSVES MFEKLGRS GA+K+KYRSIMFNI+D+ NPDLR++VLLG+V P+RLVTM P
Sbjct: 199 IRVAVSVESAMFEKLGRSNGAQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPP 258
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EEMAS++R+R+ IKEKALF+C+RGG+A ATTDQFKC RCGQRKCTYYQMQTRSADEPM
Sbjct: 259 EEMASEQRKRENNQIKEKALFDCERGGKAEATTDQFKCGRCGQRKCTYYQMQTRSADEPM 318
Query: 361 TTYVTCVNCSKRWKFC 376
TTYVTCVNC+ WKFC
Sbjct: 319 TTYVTCVNCNNHWKFC 334
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/376 (61%), Positives = 271/376 (72%), Gaps = 54/376 (14%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVELF++AKKAAD+AA DGVSS GPEV RCVDALK+LKSFPVTY+ L STQVGKRL
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R LTKHP+ KIQ +AS+LL++WKK+VI+ET RNKKNG + S
Sbjct: 61 RHLTKHPKGKIQSLASDLLEMWKKVVIDET-RNKKNGGLDNNGSA--------------- 104
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
K EK S ETV EK+ N ++E K
Sbjct: 105 ------KAEKASKVETV----------------EKRVEN----------------VDERK 126
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
Q SV+KP Q + PKLT +IKCND+ RDK+RELLA AL KV SEADE+I DEVNACDP
Sbjct: 127 QFSSVKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDP 186
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
IRVAVSVESVMFEK+GRS G +K KYRSIMFNI+D NPDLR++VLLGEV P+RL+ MSP
Sbjct: 187 IRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSP 246
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EEMAS++RQR+ IKEKALF+C+RGG ATTDQFKC RCGQRK TYYQ+QTRSADEPM
Sbjct: 247 EEMASNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQTRSADEPM 306
Query: 361 TTYVTCVNCSKRWKFC 376
TT+VTCVNC+ WKFC
Sbjct: 307 TTFVTCVNCNNHWKFC 322
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/386 (60%), Positives = 288/386 (74%), Gaps = 27/386 (6%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME ELVELF+AAKKAAD+AA + GG E SRC+DAL++LK FPVTY +LVSTQVGKRL
Sbjct: 1 MENELVELFEAAKKAADAAAAPS-NDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRL 59
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R LTKHP++KIQ AS+L+++WK+IVI+ET +NKKNG+ K S G +S K++K
Sbjct: 60 RHLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKF 119
Query: 121 QKTSAVKVEKVSTAE---------TVKVEKTGSV-SRSETVQVEKKETNGDSVMDRGEAV 170
QK+S++KVE+VS E +VK K+ SV S +V+VEK ++ V
Sbjct: 120 QKSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDS----------MV 169
Query: 171 KVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE 230
KVE++++EEK KPS G A PKLT +IK D++RDKIRELL A SKV EADEE
Sbjct: 170 KVERVVKEEK------KPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEE 223
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+DEVNA DPIRVAVSVESVMFE G STGA+K KYRSIMFN++D KNPD R++VLLG +
Sbjct: 224 FMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLI 283
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
PER++ MS +MASD+R+R+ E I +KALF+C+RGG ATTDQFKC RCGQRK TYYQ
Sbjct: 284 KPERMINMSTADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQ 343
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 344 LQTRSADEPMTTFVTCVNCNNHWKFC 369
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/384 (58%), Positives = 290/384 (75%), Gaps = 11/384 (2%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME EL+ELF+ AKKAAD+AA+DGV+S GPE+S+C+DALK+LK FPVTYD LV+TQVGK+L
Sbjct: 1 METELIELFEGAKKAADAAALDGVTSSGPEISQCLDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R L+KHP E+I+ VA++LL+IWKK+VIEET++ KK GST S T K D +++
Sbjct: 61 RSLSKHPVEEIKSVATDLLEIWKKVVIEETSKAKKIGSTNGVKSETAKDGKIDRKDVERT 120
Query: 121 QKTSAVKVEKVS---TAETVKVEKTGSVSRSETVQVEKKETN-----GDSVMDRGEAVKV 172
+ VKV+K+ +A+++KVEK ++ ++E+KE + G + RG+ VK
Sbjct: 121 SNPAPVKVQKLQRGDSAKSIKVEKKEPDNKV-GAKIERKEQDNKVNTGAKLDHRGQTVKD 179
Query: 173 EKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEII 232
EK+ +E + S + P++ A PKLT ++KCND RDKIRE+L ALS+V E+DE
Sbjct: 180 EKVSKENQS--STKAPAKSPNAPPKLTSMLKCNDPVRDKIREMLVEALSRVHGESDEYDR 237
Query: 233 DEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTP 292
++VN CDP RVAVSVES MFEKLGRSTGAEK KYRSIMFN+RD NPDLR+RVL GEV P
Sbjct: 238 EKVNGCDPFRVAVSVESHMFEKLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTGEVPP 297
Query: 293 ERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQ 352
E+L+T+S EEMASD+R+++ IKEK LF C++G A+TDQFKC RCGQRKCTYYQMQ
Sbjct: 298 EKLITLSAEEMASDKRKQENNQIKEKFLFNCEQGPAPKASTDQFKCGRCGQRKCTYYQMQ 357
Query: 353 TRSADEPMTTYVTCVNCSKRWKFC 376
TRSADEPMTTYVTCVNC+ WKFC
Sbjct: 358 TRSADEPMTTYVTCVNCNNHWKFC 381
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/386 (58%), Positives = 295/386 (76%), Gaps = 18/386 (4%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME +L++LF+ AKKAAD+AA+DGV+S GPEVS+C+DALK+LK FPVTYD LV+TQVGK+L
Sbjct: 1 MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKN-GSTGDKSSVTTGVVKPDSGKIDK 119
R L KHP E I+ VA++LL+IWKK+VIEET + KK G+ G K + K + ++K
Sbjct: 61 RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEA------KVNKMDVEK 114
Query: 120 VQKTSAVKVEKV---STAETVKVEKTGSVSRSET-VQVEKKE-----TNGDSVMDRGEAV 170
+ VKV+K+ +A+++KVE+ ++ T V++E+K TNG + RG+AV
Sbjct: 115 PSNPAPVKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAV 174
Query: 171 KVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE 230
K EK+ ++ + S++ P++ A PKLT ++KCND RDKIRELL AL +V EAD+
Sbjct: 175 KDEKVSKDNQS--SMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLMEALCRVAGEADDY 232
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+ VNA DP+RVAVSVES+MFEKLGRSTGA+KLKYRSIMFN+RD NPDLR+RVL GE+
Sbjct: 233 ERESVNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEI 292
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
+PE+L+T+S E+MASD+R+++ IKEKALF+C+RG A A+TDQFKC RCGQRKCTYYQ
Sbjct: 293 SPEKLITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQ 352
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
MQTRSADEPMTTYVTCVNC WKFC
Sbjct: 353 MQTRSADEPMTTYVTCVNCDNHWKFC 378
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/386 (58%), Positives = 295/386 (76%), Gaps = 18/386 (4%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME +L++LF+ AKKAAD+AA+DGV+S GPEVS+C+DALK+LK FPVTYD LV+TQVGK+L
Sbjct: 1 MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKN-GSTGDKSSVTTGVVKPDSGKIDK 119
R L KHP E I+ VA++LL+IWKK+VIEET + KK G+ G K + K + ++K
Sbjct: 61 RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEA------KVNKMDVEK 114
Query: 120 VQKTSAVKVEKV---STAETVKVEKTGSVSRSET-VQVEKKE-----TNGDSVMDRGEAV 170
+ VKV+K+ +A+++KVE+ ++ T V++E+K TNG + RG+AV
Sbjct: 115 PSNPAPVKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAV 174
Query: 171 KVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE 230
K EK+ ++ + S++ P++ A PKLT ++KCND RDKIRELL AL +V EAD+
Sbjct: 175 KDEKVSKDNQS--SMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDY 232
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+ VNA DP+RVAVSVES+MFEKLGRSTGA+KLKYRSIMFN+RD NPDLR+RVL GE+
Sbjct: 233 ERESVNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEI 292
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
+PE+L+T+S E+MASD+R+++ IKEKALF+C+RG A A+TDQFKC RCGQRKCTYYQ
Sbjct: 293 SPEKLITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQ 352
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
MQTRSADEPMTTYVTCVNC WKFC
Sbjct: 353 MQTRSADEPMTTYVTCVNCDNHWKFC 378
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 275/378 (72%), Gaps = 23/378 (6%)
Query: 5 LVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLT 64
LVEL++AAKKAAD++ + E +RC+DAL++LK+FPV Y +LV+TQVGK L+ LT
Sbjct: 9 LVELYEAAKKAADAST--STDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLT 66
Query: 65 KHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTS 124
KHPRE I+ A +L+ IWK ++I+ET++NK NG++ K T G + K K+QK+
Sbjct: 67 KHPRENIRTFAVDLIAIWKDVIIKETSKNK-NGASDSKVESTNG----ERAKAGKLQKSP 121
Query: 125 AVKVEKVSTAETVKVEKTGSVS------RSETVQVEKKETNGDSVMDRGEAVKVEKIIEE 178
+VKVEK +A+ KV GS R++ V V+ ++T DR +K + E
Sbjct: 122 SVKVEKGESAKVEKVNGNGSSKLSSGNVRAQNVDVKIEKT------DRTSNIKAK----E 171
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK + +K S A PKL +IK NDS+RDKIRELL +AL+KV EADE+++DEVNAC
Sbjct: 172 EKPVSAAKKISSSAAAPPKLKTMIKSNDSARDKIRELLRDALAKVFEEADEDMMDEVNAC 231
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DPIRVAV+VESV+FE G S GA+K+KYRS+MFN++D+KNPD R++VLLG V P+RL M
Sbjct: 232 DPIRVAVTVESVLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVM 291
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
S EMAS++R+++ E I++KALF+C+RG + ATTDQFKC RCGQRK TYYQMQTRSADE
Sbjct: 292 SSAEMASEQRKQENEKIEQKALFDCERGLQPKATTDQFKCGRCGQRKTTYYQMQTRSADE 351
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTTYVTCVNC+ RWKFC
Sbjct: 352 PMTTYVTCVNCNNRWKFC 369
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/386 (59%), Positives = 295/386 (76%), Gaps = 18/386 (4%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME +L+ LF+ AKKAAD+AA+DGV+S GPEVS+C+DALK+LK FPVTYD LV+TQVGK+L
Sbjct: 1 MESDLIGLFEGAKKAADAAALDGVASSGPEVSQCLDALKQLKKFPVTYDTLVATQVGKKL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKN-GSTGDKSSVTTGVVKPDSGKIDK 119
R L KHP E+I+ VA++LL+IWKK+VI ET + KK G+ G K + K + +DK
Sbjct: 61 RSLAKHPIEEIKSVATDLLEIWKKVVIGETAKAKKTEGTNGCKEA------KVNKMDVDK 114
Query: 120 VQKTSAVKVEKV---STAETVKVEKTGSVSRSET-VQVEKKE-----TNGDSVMDRGEAV 170
+ VKV+K+ +A+++KVE+ ++ T V++E+KE TNG + RG+AV
Sbjct: 115 PSNPAPVKVQKLQRGDSAKSIKVERKEPDNKGVTGVKIERKELDNKVTNGTKIDYRGQAV 174
Query: 171 KVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE 230
K EK+ ++ + S++ P++ A PKLT ++KCND RDKIRELL +AL +V EAD+
Sbjct: 175 KDEKVSKDNQS--SMKAPAKAPNAPPKLTAMLKCNDPVRDKIRELLVDALCRVAGEADDY 232
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
VNA DP+RVAVSVES+MFEKLGRSTGA+KLKYRSIMFN+RD NPDLR+RVL GE+
Sbjct: 233 ERKSVNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDGNNPDLRRRVLTGEI 292
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
+PE+L+T+S EEMASD+R+++ IKEKALF+C+RG A A+TDQFKC RCGQRKCTYYQ
Sbjct: 293 SPEKLITLSAEEMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQ 352
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
MQTRSADEPMTTYVTCVNC WKFC
Sbjct: 353 MQTRSADEPMTTYVTCVNCDNHWKFC 378
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/377 (57%), Positives = 278/377 (73%), Gaps = 10/377 (2%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVEL++AAKKAA AAI G G E SRC+DAL++LK FPV Y +LV+TQVGK L
Sbjct: 1 MEKELVELYEAAKKAA-DAAISG--DGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
+ LTKHPR KI+ A +L++IWK I+I+ET++NK NG + K G + K K+
Sbjct: 58 KVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNK-NGGSDSKVESANG----EKSKAGKM 112
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSV-SRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEE 179
QK+ +VKVEK T + K+++ G+ S SE ++ + + + DR +VKVEKI +EE
Sbjct: 113 QKSPSVKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKT-DRSASVKVEKIAKEE 171
Query: 180 KQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACD 239
K +K S + A PKL +IK ND++RDKIRE+L ALSKVT EADE+++D VN D
Sbjct: 172 KPVSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSD 231
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
PIRVAV+VESV+FEK G S GA+K+KYRS+MFN++D NPD R++VLLG + PE+L+ MS
Sbjct: 232 PIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMS 291
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
EMAS++R+++ + I EKALFEC+RGG ATTDQFKC RCGQRK TYYQMQTRSADEP
Sbjct: 292 TAEMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEP 351
Query: 360 MTTYVTCVNCSKRWKFC 376
MTTYVTCV C+ RWKFC
Sbjct: 352 MTTYVTCVVCNNRWKFC 368
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/377 (56%), Positives = 277/377 (73%), Gaps = 10/377 (2%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVEL++AAKKAA AAI G G E SRC+DA ++LK FPV Y +LV+TQVGK L
Sbjct: 1 MEKELVELYEAAKKAA-DAAISG--DGKHEESRCIDAFEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
+ LTKHPR KI+ A +L++IWK I+I+ET++NK NG + K G + K K+
Sbjct: 58 KVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNK-NGGSDSKVESANG----EKSKAGKM 112
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSV-SRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEE 179
QK+ +VKVEK T + K+++ G+ S SE ++ + + + DR +VKVEKI +EE
Sbjct: 113 QKSPSVKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKT-DRSASVKVEKIAKEE 171
Query: 180 KQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACD 239
K +K S + A PKL +IK ND++RDKIRE+L ALSKVT EADE+++D VN D
Sbjct: 172 KPVSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSD 231
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
PIRVAV+VESV+FEK G S GA+K+KYRS+MFN++D NPD R++VLLG + PE+L+ MS
Sbjct: 232 PIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMS 291
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
EMAS++R+++ + I EKALFEC+RGG ATTDQFKC RCGQRK TYYQMQTRSADEP
Sbjct: 292 TAEMASEQRKQEYQKITEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEP 351
Query: 360 MTTYVTCVNCSKRWKFC 376
MTT+VTCV C+ RWKFC
Sbjct: 352 MTTHVTCVVCNNRWKFC 368
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/386 (56%), Positives = 274/386 (70%), Gaps = 28/386 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+EL+E FDAAKKAAD+ A DG S PE RC+DAL+RL+ V D+LVSTQVGKRL
Sbjct: 1 MERELLETFDAAKKAADATAADGDS---PEADRCLDALRRLRDIRVNTDILVSTQVGKRL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPLTKHP IQ VA++L WKK+V+EE+ + K GS ++SS ++G KV
Sbjct: 58 RPLTKHPHSGIQAVAADLFGYWKKVVLEESGK-KNGGSENERSSDSSG----------KV 106
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSE---TVQVEKKETNGDSVMDRGEAVKVEKIIE 177
+K +KVEK S + ++KVEK R + +V+VEK +NG R ++VKVE++ +
Sbjct: 107 EKVRPMKVEKNSASASMKVEKRDVDVRGQKPGSVKVEKTASNGS----RTQSVKVERVSK 162
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE------- 230
E + P +KP+ PKLT L+KCND +RDKIRELLA A +KV+ E +
Sbjct: 163 EVSRTPDAKKPASTPSGAPKLTSLVKCNDPTRDKIRELLAEAFAKVSRETSNDDRDEVRN 222
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
I+DEV+ACDP RVAV VES +FE+LGRSTGA K KYRSIMFN+R E N D R+RVL+GEV
Sbjct: 223 ILDEVDACDPYRVAVKVESALFERLGRSTGAHKTKYRSIMFNLRAENNTDFRRRVLIGEV 282
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
TPE L +SP+EMASD R+++ IKEKALFEC+R G ATTDQFKC RCGQRK TYYQ
Sbjct: 283 TPEGLPDISPDEMASDARKQENMQIKEKALFECERAGAPKATTDQFKCGRCGQRKTTYYQ 342
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 343 LQTRSADEPMTTFVTCVNCNNHWKFC 368
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 276/377 (73%), Gaps = 11/377 (2%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVEL++AAKKAA AAI G G E SRC+DAL++LK FPV Y +LV+TQVGK L
Sbjct: 1 MEKELVELYEAAKKAA-DAAISG--DGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
+ LTKHPR+KI+ A +L++IWK I+I+ET++NK GS S + K K+
Sbjct: 58 KVLTKHPRQKIKSFAIDLIEIWKGIIIKETSKNKNGGSDSKDESANR-----EKSKAGKM 112
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETN-GDSVMDRGEAVKVEKIIEEE 179
QK+ +VK+EK T + K+E+ G+ S+S ++K + + + DR +VK+EKI EE
Sbjct: 113 QKSPSVKIEKGETVKVEKIERNGT-SKSSFENMKKVQNDVKNERTDRAASVKMEKIAEE- 170
Query: 180 KQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACD 239
K +K S + A PKL +IK ND++RDKIRE+L ALSKVT EADE+++ VN D
Sbjct: 171 KPISGAKKMSSSSTAPPKLKTMIKSNDATRDKIREILHEALSKVTREADEDLVAVVNDSD 230
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
PIRVAV+VESV+FEK G S GA+K+KYRS+MFN++D NPD R++VLLG V PE+L+ MS
Sbjct: 231 PIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMS 290
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
EMAS++R+++ + I EKALFEC+RGG+ ATTDQFKC RCGQRK TYYQMQTRSADEP
Sbjct: 291 TAEMASEQRKQEYQKITEKALFECERGGQPKATTDQFKCGRCGQRKTTYYQMQTRSADEP 350
Query: 360 MTTYVTCVNCSKRWKFC 376
MTTYVTC C+ RWKFC
Sbjct: 351 MTTYVTCCVCNNRWKFC 367
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/386 (56%), Positives = 274/386 (70%), Gaps = 29/386 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+EL+E FDAAKKAAD+ A G S PE RC+DAL RL+ V D+LVSTQVGKRL
Sbjct: 1 MERELLETFDAAKKAADATAGQGDS---PEAGRCLDALHRLRDIRVNTDILVSTQVGKRL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPLTKHP IQ VAS+L WKK+V+EET KKNGS+ ++ S+ + SGK++KV
Sbjct: 58 RPLTKHPHSGIQAVASDLFGYWKKVVLEET--GKKNGSSENEKSMDS------SGKVEKV 109
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSE---TVQVEKKETNGDSVMDRGEAVKVEKIIE 177
+ +KVEK S + ++KVEK R + V+VEK +NG R ++VKVE++ +
Sbjct: 110 R---PMKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGS----RTQSVKVERVSK 162
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE------- 230
E + +KP+ PKLT L+KCND +RDKIRELLA A +KV E +
Sbjct: 163 EVNRT-DAKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRN 221
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
I+DEV+ACDP RVAV+VES +FE+ GRSTGA K KYRSIMFN+R E N D R+RVL+G+V
Sbjct: 222 ILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQV 281
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
TPERL +SP+EMASD R+++ IKEKALF+C+RG ATTDQFKC RCGQRK TYYQ
Sbjct: 282 TPERLPDISPDEMASDARKQENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRKTTYYQ 341
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 342 LQTRSADEPMTTFVTCVNCNNHWKFC 367
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/386 (56%), Positives = 273/386 (70%), Gaps = 29/386 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+EL+E F+AAKKAAD+AA S PE RC+DA++RL+ VT DVLVSTQVGKRL
Sbjct: 1 MERELLETFEAAKKAADAAAGADDS---PEADRCLDAMRRLRGLRVTTDVLVSTQVGKRL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R LTKHP IQ +A++LL WKK+VIEE KKNG+T + S + +
Sbjct: 58 RYLTKHPHSDIQSMATDLLGYWKKVVIEE---GKKNGTTENVGSTNSAA---------RA 105
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRS---ETVQVEKKETNGDSVMDRGEAVKVEKIIE 177
+K +KV+K S + +VK EK R E+++VEK TN DS + + VKVE+ +
Sbjct: 106 EKAQPMKVDKSSASGSVKPEKREVNVRGQKPESIKVEKI-TNNDS---KNQQVKVERAPK 161
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKV---TSEADEE---- 230
E + P +KPS PKLT L+KCND +RDKIRELLA+A S+V TS+ D E
Sbjct: 162 EATRTPDTKKPSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRN 221
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
I+DEV+A DP RVAV+VES +FE+LGRSTGA K KYRSIMFN+R + N D R+RVLLG+V
Sbjct: 222 ILDEVDARDPFRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQV 281
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
PERLV +SPEEMASD R+ + + IKEKALF+C+RGG ATTDQFKC RCGQRK TYYQ
Sbjct: 282 RPERLVDISPEEMASDARKLENKQIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQ 341
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 342 LQTRSADEPMTTFVTCVNCNNHWKFC 367
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/383 (56%), Positives = 271/383 (70%), Gaps = 29/383 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+EL+E FDAAKKAAD+ A G S PE RC+DAL RL+ V D+LVSTQVGKRL
Sbjct: 1 MERELLETFDAAKKAADATAGQGDS---PEAGRCLDALHRLRDIRVNTDILVSTQVGKRL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPLTKHP IQ VAS+L WKK+V+EET KKNGS+ ++ S+ + SGK++KV
Sbjct: 58 RPLTKHPHSGIQAVASDLFGYWKKVVLEET--GKKNGSSENEKSMDS------SGKVEKV 109
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSE---TVQVEKKETNGDSVMDRGEAVKVEKIIE 177
+ +KVEK S + ++KVEK R + V+VEK +NG R ++VKVE++ +
Sbjct: 110 R---PMKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGS----RTQSVKVERVSK 162
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE------- 230
E + +KP+ PKLT L+KCND +RDKIRELLA A +KV E +
Sbjct: 163 EVNRT-DAKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRN 221
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
I+DEV+ACDP RVAV+VES +FE+ GRSTGA K KYRSIMFN+R E N D R+RVL+G+V
Sbjct: 222 ILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQV 281
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
TPERL +SP+EMASD R+++ IKEKALF+C+RG ATTDQFKC RCGQRK TYYQ
Sbjct: 282 TPERLPDISPDEMASDARKQENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRKTTYYQ 341
Query: 351 MQTRSADEPMTTYVTCVNCSKRW 373
+QTRSADEPMTT+VTCVNC+ W
Sbjct: 342 LQTRSADEPMTTFVTCVNCNNHW 364
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/383 (53%), Positives = 271/383 (70%), Gaps = 26/383 (6%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+EL+E F+AAKKAAD+ A D +G PE RC+DAL+RL++F VT +VLVSTQVGKRL
Sbjct: 1 MERELLETFEAAKKAADAVAED---AGSPEADRCLDALRRLRAFRVTTEVLVSTQVGKRL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R LTKHP IQ +A++L WKKIVIEET KKNG++ ++ + ++
Sbjct: 58 RYLTKHPHSDIQAMATDLFGYWKKIVIEET--GKKNGTSANEKLDNSAA---------RL 106
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
+K+ ++KVEK S+ +VK+EK ++V+K + + + + VKVE + ++
Sbjct: 107 EKSQSMKVEKNSSLASVKIEKNDL-----DIRVQKSDVKVEKIANNDSKVKVEMVSKDVS 161
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKV---TSEADEE----IID 233
+ +K S P+LT L++CND++RDK RELLA A KV TS+ D E ++D
Sbjct: 162 RTLDTKKSSSVPNGPPRLTSLVRCNDAARDKYRELLAEAFFKVSKETSKDDREEVRNLLD 221
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
EVNACDP RV+V+VES +FE+LGRSTGA K KYRSI+FN++ + NPD R+RVLLGEV P
Sbjct: 222 EVNACDPYRVSVTVESALFERLGRSTGAHKAKYRSILFNLKADNNPDFRRRVLLGEVRPG 281
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
RLV +SP+EMASD R+ + + IKEKALF+C+R G ATTDQFKC RCGQRK TYYQ+QT
Sbjct: 282 RLVDISPDEMASDARKLENKQIKEKALFDCERAGAPKATTDQFKCGRCGQRKTTYYQLQT 341
Query: 354 RSADEPMTTYVTCVNCSKRWKFC 376
RSADEPMTT+VTCVNC+ WKFC
Sbjct: 342 RSADEPMTTFVTCVNCNNHWKFC 364
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/386 (54%), Positives = 269/386 (69%), Gaps = 28/386 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
M++EL+E FDAAKKAAD AA DG S PE RC+DAL+RL+ V D+LVSTQVGKRL
Sbjct: 1 MDRELLETFDAAKKAADEAAGDGNS---PEAGRCLDALRRLRDIRVNTDILVSTQVGKRL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPLTKHP IQ VA++L WKK+V+EE+ + K GS ++SS ++G KV
Sbjct: 58 RPLTKHPHSGIQAVAADLFGYWKKVVLEESGK-KNGGSENERSSDSSG----------KV 106
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSE---TVQVEKKETNGDSVMDRGEAVKVEKIIE 177
+K VK+EK S + ++K+EK R + V+VEK +NG + ++VKVE++ +
Sbjct: 107 EKVRPVKIEKNSASASMKLEKRDVDVRGQKPNNVKVEKTTSNGS----KAQSVKVERVSK 162
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE------- 230
E + P ++P+ PKLT L+KCND +RDKIRELLA A V+ E ++
Sbjct: 163 EVIRTPDSKRPASVPNGHPKLTSLVKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKN 222
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
I+DEV ACDP RVAV+VES +FE+LG STG + KYRSIMFN+R E N D R+RVL+G V
Sbjct: 223 ILDEVEACDPYRVAVTVESALFERLGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLV 282
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
PERL + P+EMASD R+++ IKEKALF+C+RG ATTDQFKC+RCGQRK TYYQ
Sbjct: 283 APERLPDIPPDEMASDARKQENMQIKEKALFDCERGAAPKATTDQFKCARCGQRKTTYYQ 342
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 343 LQTRSADEPMTTFVTCVNCNNHWKFC 368
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/386 (53%), Positives = 268/386 (69%), Gaps = 28/386 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
M++EL+E FDAAKKAAD+AA PE RC+DAL+RL+ V D+LVSTQVGKRL
Sbjct: 1 MDRELLETFDAAKKAADAAA---GDGNSPEAGRCLDALRRLRDIRVNTDILVSTQVGKRL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
RPLTKHP IQ VA++L WKK+V+EE+ + K GS ++SS ++G KV
Sbjct: 58 RPLTKHPHSGIQAVAADLFGYWKKVVLEESGK-KNGGSENERSSDSSG----------KV 106
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSE---TVQVEKKETNGDSVMDRGEAVKVEKIIE 177
+K +VK+EK S + ++K+EK R + +VEK +NG + ++VKVE++ +
Sbjct: 107 EKARSVKIEKNSASASMKLEKRDVDVRGQKPNNAKVEKTTSNGS----KAQSVKVERVSK 162
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE------- 230
E + P ++P+ PKLT L+KCND +RDKIRELLA A +V+ E ++
Sbjct: 163 EVIRTPDAKRPASVPNGHPKLTSLVKCNDPTRDKIRELLAEAFVRVSRETSDDDRDEVRN 222
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
I+DEV A DP RVAV+VES +FE+LG STG + KYRSIMFN+R E N D R+RVL+G V
Sbjct: 223 ILDEVEARDPYRVAVTVESALFERLGPSTGTHRAKYRSIMFNLRAESNTDFRRRVLIGLV 282
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
PERL +SP+EMASD R+++ IKEKALF+C+RG ATTDQFKC+RCGQRK TYYQ
Sbjct: 283 APERLPDVSPDEMASDARKQENMQIKEKALFDCERGAAPKATTDQFKCARCGQRKTTYYQ 342
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKFC 376
+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 343 LQTRSADEPMTTFVTCVNCNNHWKFC 368
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/376 (53%), Positives = 250/376 (66%), Gaps = 50/376 (13%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
+E ELVELF A+KAAD AA D E RC+DALK L+S PVT +LVSTQVGKRL
Sbjct: 6 VENELVELFQKAQKAADKAAKDDGCEEAEE-QRCLDALKALRSVPVTMGILVSTQVGKRL 64
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R +TKHPREKI+ +A+ LLD WKK+V ET PD+G
Sbjct: 65 RNVTKHPREKIRTLAAELLDAWKKVVTSETL--------------------PDNG----- 99
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
A KVE ++VKVE S +GE+VKVEK + E
Sbjct: 100 --NKATKVED-KQFKSVKVEVNAS---------------------KGESVKVEKKPKVET 135
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
++ +K S + PKLT +IKCND+ RDK RE+L A SKV +EA+ E + VNACDP
Sbjct: 136 ESIGSKKASSSSNGPPKLTSMIKCNDALRDKFREILYEAFSKVVNEAEGEDLARVNACDP 195
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
+R+AVSVE+VMFEKLGRS GA+K KYRSIMFN++D NPDLR+RVLLG++ PE+L+ M+
Sbjct: 196 VRIAVSVETVMFEKLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTA 255
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EEMASD R+ + + IK+KALFEC+RG + ATTDQFKC +CGQR CTYYQ+QTRSADEPM
Sbjct: 256 EEMASDNRKLENKQIKDKALFECERGMKPKATTDQFKCGKCGQRMCTYYQLQTRSADEPM 315
Query: 361 TTYVTCVNCSKRWKFC 376
TT+VTCVNC+ WKFC
Sbjct: 316 TTFVTCVNCNNHWKFC 331
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/376 (50%), Positives = 248/376 (65%), Gaps = 54/376 (14%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
+E+EL+ELF+ KKAAD A + E RC+DALK L++ PVT VLVSTQVGKRL
Sbjct: 7 VEKELLELFEKVKKAADKAI-----TNEAEEQRCLDALKALRAVPVTMGVLVSTQVGKRL 61
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R LTKHP+E I +A++LLD WKK+V ET N N +T +
Sbjct: 62 RNLTKHPQENICTLATDLLDSWKKVVTSETLANSGNKATQSED----------------- 104
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
+++ ++KVE +V R +K + S+ ++
Sbjct: 105 KQSKSIKVED------------NAVKRESVKVEKKPKEEEASITNK-------------- 138
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
+V S G PKLT +IKCND+ RDKIRE++ A SKV +EA+ E + +NACDP
Sbjct: 139 ---NVSSSSNGP---PKLTSMIKCNDAVRDKIREIIYEAFSKVVNEAEGENMVRINACDP 192
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
+RVAV+VE++MFEKLGRS GA+KLKYRSI+FN++D NPDLR+RVLLGE+ PE+L+ M+
Sbjct: 193 VRVAVTVETLMFEKLGRSNGAQKLKYRSIIFNLKDANNPDLRRRVLLGEIKPEKLIVMTA 252
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EEMASD+R+ + + IK+KALFEC+RG + ATTDQFKC +CGQRKCTYYQ+QTRSADEPM
Sbjct: 253 EEMASDQRKLENKQIKDKALFECERGIKPKATTDQFKCGKCGQRKCTYYQLQTRSADEPM 312
Query: 361 TTYVTCVNCSKRWKFC 376
TT+VTCVNC+ WKFC
Sbjct: 313 TTFVTCVNCNNHWKFC 328
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 192/374 (51%), Positives = 246/374 (65%), Gaps = 52/374 (13%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
E+ELVELF+ AKKAA + ++ GG E SRC+DAL +LK+FPVT +LVSTQVGK LR
Sbjct: 8 EKELVELFEVAKKAAGATELE--EKGGAEESRCLDALAQLKAFPVTAQLLVSTQVGKLLR 65
Query: 62 PLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQ 121
PLTKH R+ IQ +AS++ +WKK +E+T+ KKNG DK+S
Sbjct: 66 PLTKHSRKNIQDLASDVFPLWKKKFLEQTSSTKKNGMLEDKTS----------------- 108
Query: 122 KTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQ 181
V + E +K+EKT T++VE K + +GE + K++E
Sbjct: 109 ---------VKSTENIKIEKT------RTIKVEAKTEH------KGEP-RSAKVVE---- 142
Query: 182 APSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPI 241
S+ + +P++ + KCND SRD IRE L AL KV+SEA+EEI EVNACD I
Sbjct: 143 -------SECLLRSPRMKSIPKCNDPSRDNIREQLYEALCKVSSEANEEIQKEVNACDAI 195
Query: 242 RVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
VAV+VES +F G S G++++KYRS++FN RD KNPD R++VLLG+V PER+ +S E
Sbjct: 196 GVAVAVESALFSNWGPSNGSDRIKYRSLIFNTRDAKNPDFRRKVLLGQVKPERIAELSSE 255
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
EMASDER+++ + IKEKAL CQ G ATTDQFKC RCGQRK +YYQMQTRSADEPMT
Sbjct: 256 EMASDERRKKNKEIKEKALLVCQLAGAPKATTDQFKCGRCGQRKTSYYQMQTRSADEPMT 315
Query: 362 TYVTCVNCSKRWKF 375
TYVTCVNCS RWK
Sbjct: 316 TYVTCVNCSNRWKM 329
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 186/331 (56%), Positives = 235/331 (70%), Gaps = 26/331 (7%)
Query: 56 VGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSG 115
VGKRLRPLTKHP IQ VAS+L WKK+V+EET KKNGS+ ++ S+ + SG
Sbjct: 4 VGKRLRPLTKHPHSGIQAVASDLFGYWKKVVLEET--GKKNGSSENEKSMDS------SG 55
Query: 116 KIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSE---TVQVEKKETNGDSVMDRGEAVKV 172
K++KV+ +KVEK S + ++KVEK R + V+VEK +NG R ++VKV
Sbjct: 56 KVEKVR---PMKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGS----RTQSVKV 108
Query: 173 EKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE-- 230
E++ +E + +KP+ PKLT L+KCND +RDKIRELLA A +KV E +
Sbjct: 109 ERVSKEVNRT-DAKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDR 167
Query: 231 -----IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRV 285
I+DEV+ACDP RVAV+VES +FE+ GRSTGA K KYRSIMFN+R E N D R+RV
Sbjct: 168 DEVRNILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRV 227
Query: 286 LLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRK 345
L+G+VTPERL +SP+EMASD R+++ IKEKALF+C+RG ATTDQFKC RCGQRK
Sbjct: 228 LIGQVTPERLPDISPDEMASDARKQENLQIKEKALFDCERGAAPKATTDQFKCGRCGQRK 287
Query: 346 CTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TYYQ+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 288 TTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 318
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 193/389 (49%), Positives = 259/389 (66%), Gaps = 29/389 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSG-----GPEVSRCVDALKRLKSFPVTYDVLVSTQ 55
ME+EL+E F+AA+KAAD+ ++G PE +RCVDAL+RL+ VT LVSTQ
Sbjct: 7 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 66
Query: 56 VGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSG 115
+G+R+R LTKHP I+ AS+LL WKK+VIEE +KKNG+ + S +T V
Sbjct: 67 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEE---DKKNGALQNGKSSSTVV------ 117
Query: 116 KIDKVQKTSAVKVEKVSTAETVKVEKTGS-VSRSETVQVEKKETNGDSVMDRGEAVKVEK 174
KV+K +KVEK S TV + V + +VEK +N + R +++KVEK
Sbjct: 118 ---KVEKVEPMKVEKASPRATVNNNNMDTRVVNHKGGKVEK-FSNAEL---RTQSIKVEK 170
Query: 175 IIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE---- 230
+ + + SV KPS P+LT ++KC D+SRD+IR +L +A S+V+ E ++
Sbjct: 171 VQKVVHKVSSVEKPSPVQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREE 230
Query: 231 ---IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLL 287
II+EV ACDP R+AV VE +F+KLG G K +YRS+MFN++D+ N D R+RVLL
Sbjct: 231 VRNIIEEVKACDPFRIAVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLL 290
Query: 288 GEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCT 347
G+V PER+ ++P EMASD R+ + + I+EKALFEC+RGG ATTDQFKC RCGQRK T
Sbjct: 291 GQVQPERIADLTPTEMASDTRKLENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTT 350
Query: 348 YYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
YYQ+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 351 YYQLQTRSADEPMTTFVTCVNCNNHWKFC 379
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/389 (49%), Positives = 259/389 (66%), Gaps = 29/389 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSG-----GPEVSRCVDALKRLKSFPVTYDVLVSTQ 55
ME+EL+E F+AA+KAAD+ ++G PE +RCVDAL+RL+ VT LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 56 VGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSG 115
+G+R+R LTKHP I+ AS+LL WKK+VIEE +KKNG+ + S +T V
Sbjct: 61 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEE---DKKNGALQNGKSSSTVV------ 111
Query: 116 KIDKVQKTSAVKVEKVSTAETVKVEKTGS-VSRSETVQVEKKETNGDSVMDRGEAVKVEK 174
KV+K +KVEK S TV + V + +VEK +N + R +++KVEK
Sbjct: 112 ---KVEKVEPMKVEKASPRATVNNNNMDTRVVNHKGGKVEK-FSNAEL---RTQSIKVEK 164
Query: 175 IIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE---- 230
+ + + SV KPS P+LT ++KC D+SRD+IR +L +A S+V+ E ++
Sbjct: 165 VQKVVHKVSSVEKPSPVQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREE 224
Query: 231 ---IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLL 287
II+EV ACDP R+AV VE +F+KLG G K +YRS+MFN++D+ N D R+RVLL
Sbjct: 225 VRNIIEEVKACDPFRIAVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLL 284
Query: 288 GEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCT 347
G+V PER+ ++P EMASD R+ + + I+EKALFEC+RGG ATTDQFKC RCGQRK T
Sbjct: 285 GQVQPERIADLTPTEMASDTRKLENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTT 344
Query: 348 YYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
YYQ+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 345 YYQLQTRSADEPMTTFVTCVNCNNHWKFC 373
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 193/389 (49%), Positives = 259/389 (66%), Gaps = 29/389 (7%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSG-----GPEVSRCVDALKRLKSFPVTYDVLVSTQ 55
ME+EL+E F+AA+KAAD+ ++G PE +RCVDAL+RL+ VT LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 56 VGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSG 115
+G+R+R LTKHP I+ AS+LL WKK+VIEE +KKNG+ + S +T V
Sbjct: 61 IGRRIRYLTKHPHSSIKTTASDLLGHWKKVVIEE---DKKNGALQNGKSSSTVV------ 111
Query: 116 KIDKVQKTSAVKVEKVSTAETVKVEKTGS-VSRSETVQVEKKETNGDSVMDRGEAVKVEK 174
KV+K +KVEK S TV + V + +VEK +N + R +++KVEK
Sbjct: 112 ---KVEKVEPMKVEKASPRATVNNNNMDTRVVNHKGGKVEK-FSNAEL---RTQSIKVEK 164
Query: 175 IIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE---- 230
+ + + SV KPS P+LT ++KC D+SRD+IR +L +A S+V+ E ++
Sbjct: 165 VQKVVHKVSSVEKPSPVQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREE 224
Query: 231 ---IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLL 287
II+EV ACDP R+AV VE +F+KLG G K +YRS+MFN++D+ N D R+RVLL
Sbjct: 225 VRNIIEEVQACDPFRIAVMVECPLFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLL 284
Query: 288 GEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCT 347
G+V PER+ ++P EMASD R+ + + I+EKALFEC+RGG ATTDQFKC RCGQRK T
Sbjct: 285 GQVQPERIADLTPTEMASDTRKLENKKIEEKALFECERGGAPKATTDQFKCGRCGQRKTT 344
Query: 348 YYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
YYQ+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 345 YYQLQTRSADEPMTTFVTCVNCNNHWKFC 373
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/331 (56%), Positives = 232/331 (70%), Gaps = 26/331 (7%)
Query: 56 VGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSG 115
VGKRLR LTKHP IQ +A++LL WKK+VIEE KKNG+T + S +
Sbjct: 1 VGKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEE---GKKNGTTENVGSTNSAA------ 51
Query: 116 KIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRS---ETVQVEKKETNGDSVMDRGEAVKV 172
+ +K +KV+K S + +VK EK R E+++VEK TN DS + + VKV
Sbjct: 52 ---RAEKAQPMKVDKSSASGSVKPEKREVNVRGQKPESIKVEKI-TNNDS---KNQQVKV 104
Query: 173 EKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKV---TSEADE 229
E+ +E + P +KPS PKLT L+KCND +RDKIRELLA+A S+V TS+ D
Sbjct: 105 ERAPKEATRTPDTKKPSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDR 164
Query: 230 E----IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRV 285
E I+DEV+A DP RVAV+VES +FE+LGRSTGA K KYRSIMFN+R + N D R+RV
Sbjct: 165 EEVRNILDEVDARDPFRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRV 224
Query: 286 LLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRK 345
LLG+V PERLV +SPEEMASD R+ + + IKEKALF+C+RGG ATTDQFKC RCGQRK
Sbjct: 225 LLGQVRPERLVDISPEEMASDARKLENKQIKEKALFDCERGGAPKATTDQFKCGRCGQRK 284
Query: 346 CTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TYYQ+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 285 TTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 315
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 177/306 (57%), Positives = 221/306 (72%), Gaps = 26/306 (8%)
Query: 81 IWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAE----- 135
+WK+IVI+ET +NKKNG+ K S G +S K++K QK+S++KVE+VS E
Sbjct: 1 MWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVSKVEQFDRN 60
Query: 136 ----TVKVEKTGSV-SRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQ 190
+VK K+ SV S +V+VEK ++ VKVE++++EEK KPS
Sbjct: 61 GATSSVKYSKSESVVSERNSVKVEKTDS----------MVKVERVVKEEK------KPSS 104
Query: 191 GTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESV 250
G A PKLT +IK D++RDKIRELL A SKV EADEE +DEVNA DPIRVAVSVESV
Sbjct: 105 GAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESV 164
Query: 251 MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR 310
MFE G STGA+K KYRSIMFN++D KNPD R++VLLG + PER++ MS +MASD+R+R
Sbjct: 165 MFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKR 224
Query: 311 QIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCS 370
+ E I +KALF+C+RGG ATTDQFKC RCGQRK TYYQ+QTRSADEPMTT+VTCVNC+
Sbjct: 225 ENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCN 284
Query: 371 KRWKFC 376
WKFC
Sbjct: 285 NHWKFC 290
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/383 (44%), Positives = 232/383 (60%), Gaps = 18/383 (4%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
E ELV LF+ A AA+ A DG E+ RC +ALK + + V+ +L+STQVGKRLR
Sbjct: 3 EAELVSLFEKASNAAEKAVSDGAVLAAEEM-RCQEALKAMGAVEVSTSILLSTQVGKRLR 61
Query: 62 PLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQ 121
LTKH KI A LL+ WKK+V +E K+G++ + S +KP++ +
Sbjct: 62 KLTKHQSSKISGSAQQLLEKWKKVVADEAA--IKSGTSKEVSPT----IKPETP--GRTP 113
Query: 122 KTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQ 181
+ VK E V T V KT V K E+ S R E V + +
Sbjct: 114 PATVVKKE-VKTEVKVYTSKTSRADTKNAVPSPKVESTNVSPSPRVETKNVRAMPQPHPA 172
Query: 182 -------AP-SVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIID 233
AP + + G+ PK+ L K DS+RD+ RE L A K SE +E +
Sbjct: 173 GKSATPLAPHTANGTANGSGFQPKVGNLTKAGDSTRDRFREFLIEAFKKCCSEVTDEHLA 232
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
V D +RVAV+VES +F KLG+S G+EK KYRSIMFN++D+ NPD R+R+L+GE+ PE
Sbjct: 233 MVKKTDLVRVAVAVESALFSKLGQSKGSEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPE 292
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
+ M+ ++MASD R+++ E+I+EKALFEC+RG + A+TDQF+C +CGQRK TY+Q+QT
Sbjct: 293 EIANMTADDMASDARKKENESIREKALFECERGLQNVASTDQFRCGKCGQRKTTYFQLQT 352
Query: 354 RSADEPMTTYVTCVNCSKRWKFC 376
RSADEPMTT+V CVNC+ RWKFC
Sbjct: 353 RSADEPMTTFVQCVNCNARWKFC 375
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 170/329 (51%), Positives = 234/329 (71%), Gaps = 11/329 (3%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+ELVEL++AAKKAA AAI G G E SRC+DAL++LK FPV Y +LV+TQVGK L
Sbjct: 1 MEKELVELYEAAKKAA-DAAISG--DGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
+ LTKHPR+KI+ A +L++IWK I+I+ET +NK GS S + K K+
Sbjct: 58 KVLTKHPRQKIKSFAIDLIEIWKGIIIKETGKNKNGGSDSKDESANR-----EKSKAGKM 112
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETN-GDSVMDRGEAVKVEKIIEEE 179
QK+ +VK+EK T + K+E+ G+ S+S ++K + + + DR +VK+EKI EE
Sbjct: 113 QKSPSVKIEKGETVKVEKIERNGT-SKSSFENMKKVQNDVKNERTDRAASVKMEKIAEE- 170
Query: 180 KQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACD 239
K +K S + A PKL +IK +D++RDKI+E+L ALSKVT EADE+++ VN D
Sbjct: 171 KPISGAKKMSSSSTAPPKLKTMIKSSDATRDKIKEILHEALSKVTREADEDLVAVVNDSD 230
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
PIRVAV+VESV+FEK G S GA+K+KYRS+MFN++D NPD R++VLLG V PE+L+ MS
Sbjct: 231 PIRVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMS 290
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGE 328
EMAS++R+++ + I EKALFEC+RGG+
Sbjct: 291 TAEMASEQRKQEYQKITEKALFECERGGQ 319
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/376 (47%), Positives = 214/376 (56%), Gaps = 87/376 (23%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDA-----------LKRLKSFPVTYD 49
ME+EL+ELF+A KKAAD+AA V+SG P L + T
Sbjct: 1 MEKELLELFEATKKAADAAA---VNSGAPSEEERCLERXEATQGFSGHLPGSRFHSETKQ 57
Query: 50 VLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGV 109
++ VGKRLR LTKHP +KIQ +AS+L+DIWK IVIEETT+NKKNG DK S
Sbjct: 58 RVIDILVGKRLRTLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNGDLEDKESPKPVT 117
Query: 110 VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEA 169
P++ K A + KVS AE +KVEK
Sbjct: 118 ANPENVK--------ATPLLKVSKAENIKVEK---------------------------- 141
Query: 170 VKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADE 229
Q V+KPS + PKLT + KCND+ RDK+RELL+ ALSKV EADE
Sbjct: 142 -----------QTSGVKKPSHNIVGPPKLTSISKCNDALRDKVRELLSEALSKVVGEADE 190
Query: 230 EIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+I+D VNACDPIRVAV +G D KNPDLR++VLLG+
Sbjct: 191 DIMDAVNACDPIRVAVF------------SG--------------DAKNPDLRRKVLLGQ 224
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYY 349
V PERL+ M PEEMASD RQ + + IKEKALF+C+ G ATTDQFKC RCGQRK TYY
Sbjct: 225 VMPERLLEMGPEEMASDRRQLENQQIKEKALFDCELGAAPKATTDQFKCGRCGQRKTTYY 284
Query: 350 QMQTRSADEPMTTYVT 365
Q+QTRSADEPMTT+VT
Sbjct: 285 QLQTRSADEPMTTFVT 300
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/237 (56%), Positives = 171/237 (72%), Gaps = 11/237 (4%)
Query: 147 RSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCND 206
+ V+VEK +NG + ++VKVE++ +E + P ++P+ PKLT L+KCND
Sbjct: 14 KPNNVKVEKTTSNGS----KAQSVKVERVSKEVIRTPDSKRPASVPNGHPKLTSLVKCND 69
Query: 207 SSRDKIRELLANALSKVTSEADEE-------IIDEVNACDPIRVAVSVESVMFEKLGRST 259
+RDKIRELLA A V+ E ++ I+DEV ACDP RVAV+VES +FE+LG ST
Sbjct: 70 PTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERLGPST 129
Query: 260 GAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
G + KYRSIMFN+R E N D R+RVL+G V PERL + P+EMASD R+++ IKEKA
Sbjct: 130 GTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASDARKQENMQIKEKA 189
Query: 320 LFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
LF+C+RG ATTDQFKC+RCGQRK TYYQ+QTRSADEPMTT+VTCVNC+ WKFC
Sbjct: 190 LFDCERGAAPKATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWKFC 246
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 157/376 (41%), Positives = 218/376 (57%), Gaps = 26/376 (6%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
E ELV F+ A KAAD A +G EV RC + LK + + V+ +L+STQVGKRLR
Sbjct: 3 EAELVSFFEKACKAADRAVSNGAILPAEEV-RCQETLKAMGAVEVSTALLLSTQVGKRLR 61
Query: 62 PLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDS-GKIDKV 120
LTKH KI A LL+ WKK+V +E ++G+ D S V +KP++ + V
Sbjct: 62 KLTKHQSSKISASAQQLLEEWKKVVADEAA--SRSGTPKDASPV----IKPETPARTSLV 115
Query: 121 QKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEK 180
+ V+ + A + + + K T S A +E
Sbjct: 116 SPSPRVETKNARPAPQSHPASKSASPSASQSYLAGKSTTASSAAPSSSANGSASGLES-- 173
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
K+ L K D +RD+ RELL +A K SE +E V + D
Sbjct: 174 ----------------KIGHLPKSGDPNRDRFRELLLDAFKKCCSELTDEHSKIVKSTDF 217
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
++V ++VE+V+F KLG G EK KYRSI+FN++D+ NPD R+RVL+GE+ E +V M+
Sbjct: 218 VKVTLAVETVLFSKLGLFNGKEKAKYRSILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTA 277
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
++MASD R+++ E I+EKALFEC+RG + A+TDQF+C +CGQRK TY+Q+QTRSADEPM
Sbjct: 278 DDMASDARKKENEVIREKALFECERGMQNVASTDQFRCGKCGQRKTTYFQLQTRSADEPM 337
Query: 361 TTYVTCVNCSKRWKFC 376
TT+VTCVNC+ RWKFC
Sbjct: 338 TTFVTCVNCNARWKFC 353
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 207/392 (52%), Gaps = 71/392 (18%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVS---TQVG 57
ME++LV+L+ A K++ SAA++ S+C++AL RL+ FP+T+DVL S V
Sbjct: 1 MEEQLVDLYTVAWKSSRSAALE---------SKCLNALSRLRCFPITFDVLASIPSVDVF 51
Query: 58 KRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTR-------------NKKNGSTGDKSS 104
+ + LTKHP KI +++ ++ W K ++++ R + + D++S
Sbjct: 52 RGFKALTKHPNMKIVDLSARVIAAWCKKLLKQLHRYEDYVSSIQKQPCTRTTAPSKDQTS 111
Query: 105 VTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVM 164
V P KID VK KV KV +T
Sbjct: 112 QVVATV-PKEAKIDINANPRTVKALKVQNKSFKKVSRT---------------------- 148
Query: 165 DRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVT 224
Q P + P + K + K ++S R+ IRE ++ ALS V
Sbjct: 149 ----------------QTPKILTPHPHS----KAASIPKSSNSLRESIREQISQALSMVF 188
Query: 225 SEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKR 284
+EA D + CDPI++A S+ES +F K G S + KYRS++FNI+D KNPD R++
Sbjct: 189 NEAKH---DTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRK 245
Query: 285 VLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQR 344
+L+GE+ E + M +MASDE QR+ + I+ K+L++C G E TTDQFKC +CG++
Sbjct: 246 ILVGEIKAEEVAEMDAGQMASDEMQRKNQGIQAKSLWKCIVGREQEGTTDQFKCGKCGEK 305
Query: 345 KCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ TYYQMQTRSADEPMTTYVTC C WKFC
Sbjct: 306 RTTYYQMQTRSADEPMTTYVTCTICDNHWKFC 337
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS 246
K S G ++ K L K ND++RDK+RE+L A KV EA+ + + NA DP++VAV
Sbjct: 115 KQSNGN-SSSKARPLPKSNDATRDKMREVLLEAFQKVPQEAEGQELARANAKDPVQVAVE 173
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
VE+ +F KL + +K KYRSI+FN++D NPDLR+R+LLG+++ +L TMS E+MASD
Sbjct: 174 VENALFSKLESTKVDKKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAEDMASD 233
Query: 307 ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTC 366
+R+ + + IK+KALFEC+RG + ATTDQFKC +CG+R+CTY+Q QTRSADEPMTTYVTC
Sbjct: 234 QRKAENKQIKDKALFECERGMKQEATTDQFKCGKCGRRECTYFQKQTRSADEPMTTYVTC 293
Query: 367 VNCSKRWKFC 376
VNC+ RWKFC
Sbjct: 294 VNCNNRWKFC 303
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
+L ELF K A SAA + G E RCV+AL+ ++S VT +L+STQVGK+LR L
Sbjct: 8 QLTELF----KTAQSAAQKATAVEGAEEDRCVEALQAMRSLRVTTSLLMSTQVGKQLRKL 63
Query: 64 TKHPREKIQIVASNLLDIWKK 84
TKH R KI+ +A ++L+ WKK
Sbjct: 64 TKHSRPKIRSIAVDILEDWKK 84
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 194/337 (57%), Gaps = 35/337 (10%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYD-VLVSTQVGKR 59
ME++ + LF++AKK+A A + +S PEV RC+DAL +LK FPVT VLVST V K
Sbjct: 1 MEKQFLSLFESAKKSA--AIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKE 58
Query: 60 LRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDK 119
++ LTKH + I+ AS LLD W + + RN + T+G +P + I K
Sbjct: 59 VQYLTKHRVKMIRTAASCLLDAWSRNLY---ARNPAIDGKTQPTKSTSGS-RP-ATLIVK 113
Query: 120 VQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVE------ 173
+Q +V+ +T K K + S K+ D M + KV+
Sbjct: 114 IQGRVIGRVKVNMPIQTEKKIKEEKENGSSCF----KKPPQDPAMHCTKPGKVQSIRRCF 169
Query: 174 ------KIIEEE--KQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTS 225
+I ++E K S +KPS+ + +KC+D R K+R +L +L +V
Sbjct: 170 KKPSTKRITQQENVKDFCSFKKPSE---------EPVKCSDGLRSKVRHILVESLCRVAK 220
Query: 226 EADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRV 285
E E++++ V DPI VA VES+MFE++G G ++LKYRSI+FN++D KNPDLR++V
Sbjct: 221 EVKEDLMEAVRLRDPIIVAADVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKV 280
Query: 286 LLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
LLG++ PE+LVTM+ EEMAS++RQ + + I++K+L++
Sbjct: 281 LLGQIKPEKLVTMTAEEMASNQRQFENDQIRKKSLWK 317
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 93/107 (86%)
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
MFN+RD NPDLR+RVL GE++PE+L+T+S EEMASD+R+++ IKEKALF+C+RG A
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQIKEKALFDCERGLAA 60
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
A+TDQFKC RCGQRKCTYYQMQTRSADEPMTTYVTCVNC WKFC
Sbjct: 61 KASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWKFC 107
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 178/358 (49%), Gaps = 50/358 (13%)
Query: 30 EVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEE 89
E +R +D LK+L+ VT D+L T GKRL KH + + A ++ WK+ V +E
Sbjct: 30 EEARMLDVLKQLQRRGVTADLLKRTNAGKRLNKFCKHASDAVSKSAKAAVEAWKQCVKKE 89
Query: 90 TTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSE 149
T GD + G +P K A +
Sbjct: 90 TADG------GD--TAEGGASQP----------------AKAPMANDSAAGGREGQPLAG 125
Query: 150 TVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSR 209
T+G + G + ++++ + A S S ++ P+ C + +R
Sbjct: 126 ASAAPASGTSGGGLRSAGSS---QQLLTRQPSASS----SGFSVDPPR------CGNETR 172
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG---------RSTG 260
DK+R +LA AL+ + + + P ++ ++E +++ +G +
Sbjct: 173 DKVRSMLAEALAVGYVGGGDTGPSSLQS--PNQLGAAIEEALYDLMGGGGGGGGGREAVS 230
Query: 261 AE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
AE K K RS+ FN++D KNPDLR+RVL G V PE LV +S EEMASDE++++ +KE
Sbjct: 231 AEYKAKARSLCFNLKDAKNPDLRERVLSGSVPPETLVRLSAEEMASDEQKKKNRELKEWL 290
Query: 320 LFECQRGGEATA-TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E RG A TTD F+C RC QRKCTYYQ+QTRSADEPMTT+VTC NC +RWKFC
Sbjct: 291 AKEAVRGATTNAATTDMFQCGRCKQRKCTYYQLQTRSADEPMTTFVTCTNCGQRWKFC 348
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 191/338 (56%), Gaps = 37/338 (10%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYD-VLVSTQVGKR 59
ME++ + LF++AKK+A A + +S PEV RC+DAL +LK FPVT VLVST V K
Sbjct: 1 MEKQFLSLFESAKKSA--AIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKE 58
Query: 60 LRPLTKHPREKIQIVASNLLDIW-KKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKID 118
++ LTKH + I+ AS LLD W + + + K T S G + I
Sbjct: 59 VQYLTKHRVKMIRTAASCLLDAWSRNLYARNPAIDGKTQPTKSTSGSRPGTL------IV 112
Query: 119 KVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVE----- 173
K+Q +V+ +T K K + S K+ D M + KV+
Sbjct: 113 KIQGRVIGRVKVNMPIQTEKKIKEEKENGSSCF----KKPPQDPAMHCTKPGKVQSIRRC 168
Query: 174 -------KIIEEE--KQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVT 224
+I ++E K S +KPS+ + +KC+D R K+R +L +L +V
Sbjct: 169 FKKPSTKRITQQENVKDFCSFKKPSE---------EPVKCSDGLRSKVRHILVESLCRVA 219
Query: 225 SEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKR 284
E E++++ V DPI VA VES+MFE++G G ++LKYRSI+FN++D KNPDLR++
Sbjct: 220 KEVKEDLMEAVRLRDPIIVAADVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRK 279
Query: 285 VLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+LLG++ PE+LVTM+ EEMAS++RQ + + I++K+L++
Sbjct: 280 LLLGQIKPEKLVTMTAEEMASNQRQFENDQIRKKSLWK 317
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 94/107 (87%)
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
MFN+RD NPDLR+RVL GE++PE+L+T+S EEMASD+R+++ +IKEKALF+C+RG A
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNHIKEKALFDCERGLAA 60
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
A+T+QFKC RCGQRKCTYYQMQTRSADEPMTTYVTCVNC WKFC
Sbjct: 61 KASTEQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWKFC 107
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 104/144 (72%)
Query: 233 DEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTP 292
D + CDPI++A S+ES +F K G S + KYRS++FNI+D KNPD R+++L+GE+
Sbjct: 9 DTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKA 68
Query: 293 ERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQ 352
E + M +MASDE QR+ + I+ K+L++C G E TTDQFKC +CG+++ TYYQMQ
Sbjct: 69 EEVAEMDAGQMASDEMQRKNQGIQAKSLWKCIVGREQEGTTDQFKCGKCGEKRTTYYQMQ 128
Query: 353 TRSADEPMTTYVTCVNCSKRWKFC 376
TRSADEPMTTYVTC C WKFC
Sbjct: 129 TRSADEPMTTYVTCTICDNHWKFC 152
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 4/172 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
D RD+ RELLA A+++ D E D + A+++E+ M + + K
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVE----DVAQTAIAIENAMHAQWSDTGKEYKA 213
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K+R + FN++D KNPDLR+ V G ++P L+ +SPEE+ SDER+ I+E A E
Sbjct: 214 KFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDERRNSNAKIREHATNEAV 273
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
RG + A+TD FKC +C QRKCTYYQ+QTRSADEPMTT+VTCVNC RWKFC
Sbjct: 274 RGQKKEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCDNRWKFC 325
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 107/137 (78%)
Query: 168 EAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEA 227
E+VKVEK E ++ S +K S + PKLT +IKCND+ RDK RE+L ALSKV SEA
Sbjct: 1 ESVKVEKKPMIEAESISSKKASSSSSGPPKLTSMIKCNDALRDKFREILYEALSKVASEA 60
Query: 228 DEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLL 287
+ E + VNACDP+R+AVSVE+VMFEKLGRS GA+K KYRSIMFN++D NPDLR+RVLL
Sbjct: 61 EGEDLARVNACDPVRIAVSVETVMFEKLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLL 120
Query: 288 GEVTPERLVTMSPEEMA 304
G++ PE+L+ M+ EEMA
Sbjct: 121 GQIKPEKLIVMTAEEMA 137
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Query: 201 LIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
L + ND++RD+ RE+ A+AL+ ++ I+ V+A + +E+ M K
Sbjct: 1 LTRVNDAARDRTREIFADALALCVTDGK---IESVDAKKLASIVDQIENSMTAKWPSGGK 57
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K K R + FN++D KNPDLR + GE++ L+ +SPEE+ S+ER+ E I+E A
Sbjct: 58 DYKAKVRQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNERRNANERIRELAE 117
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+E RG + A+TD FKC +C QRKCTYYQ+QTRSADEPMTT+VTCV C RWKFC
Sbjct: 118 WEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVECGNRWKFC 173
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 107/137 (78%)
Query: 168 EAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEA 227
E+VKVEK E ++ S +K S + PKLT +IKCND+ RDK RE+L ALSKV SEA
Sbjct: 1 ESVKVEKKPMLEVESISSKKASSSSNGPPKLTSMIKCNDALRDKFREILYEALSKVVSEA 60
Query: 228 DEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLL 287
+ E + VNACDP+R+AVSVE+VMFEKLGRS GA+K KYRSIMFN++D NPDLR+RVLL
Sbjct: 61 EGEDLARVNACDPVRIAVSVETVMFEKLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLL 120
Query: 288 GEVTPERLVTMSPEEMA 304
G++ PE+L+ M+ EEMA
Sbjct: 121 GQIKPEKLIVMTAEEMA 137
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 112/174 (64%), Gaps = 11/174 (6%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
IK ND++R K E+LA AL + S+AD +A+ +E+ MF+ G +
Sbjct: 26 IKLNDATRQKCFEMLAEALEQSESDADY-----------FELALDIEAEMFKLFGETNPN 74
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K K+R + N+++ KN DLR VL G ++PERL M+ +E+AS E Q Q + ++E L
Sbjct: 75 YKAKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELASKELQEQRKALEEACLK 134
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E RGG+ ATT+ F+C +C +R+CTYYQ+QTRSADEPMTT+V C NC+ RW+F
Sbjct: 135 EAIRGGQKQATTNMFRCHKCKKRECTYYQLQTRSADEPMTTFVQCTNCNNRWRF 188
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 92/127 (72%), Gaps = 1/127 (0%)
Query: 251 MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR 310
M + G K KYRS++FN++D NPDLR+RVL GE+T + LV +S EE+ASD R+
Sbjct: 1 MHRQNGGVNARYKAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASDARKS 60
Query: 311 QIENIKEKALFECQRGGEAT-ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ I++ ALFE +RG ATTDQF+C +C QRKC YYQMQTRSADEPMTT+VTC NC
Sbjct: 61 ENAQIRKTALFEAERGQHMKKATTDQFQCGKCKQRKCQYYQMQTRSADEPMTTFVTCTNC 120
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 121 GNRWKFC 127
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 88/113 (77%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K+K RS++FN+RD+ NP LR+ V+ GE++ RL M P++MAS+ER+ Q + E+ LF+
Sbjct: 269 KIKMRSLIFNLRDKNNPGLRESVVSGEISASRLCVMGPQDMASEERKAQDRKLAEENLFK 328
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ G A TD F+C+RCGQRKCTYYQMQTRSADEPMTT+VTCVNC+ RWKF
Sbjct: 329 ARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVNCNCRWKF 381
>gi|326525977|dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 148/233 (63%), Gaps = 20/233 (8%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL 60
ME+EL+E F+AAKKAAD+AA + S PE RC+DAL+RL+ F V DVLV+TQVGKRL
Sbjct: 3 MERELMETFEAAKKAADAAAEEADGSP-PEAQRCLDALRRLREFRVNTDVLVATQVGKRL 61
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVV--KPDSGKID 118
R LTKHP IQ +A++L WKK+VIEET KKNG+ + S + KP K++
Sbjct: 62 RYLTKHPNSDIQAMAADLFGYWKKVVIEET--GKKNGTPANGKSDNSAAKADKPQPMKVE 119
Query: 119 KVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKE--------TNGDSVMDRGEAV 170
K ++ VK+EK ST+ TVK EK+ S S +V++EKK+ N DS + V
Sbjct: 120 KNSVSAKVKIEKNSTSATVKTEKS---SMSTSVKIEKKDGSIKVEKTENNDSKVQ----V 172
Query: 171 KVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKV 223
KVEK+ +E + P +K S PKLT L++CND++RDK RELL A S+
Sbjct: 173 KVEKVSKEVSRTPDTKKQSSVPNGPPKLTSLVRCNDAARDKYRELLVEASSRF 225
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 88/113 (77%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K+K RS++FN+RD+ NP LR+ V+ GE++ RL M P++MAS+ER+ Q + E+ LF+
Sbjct: 269 KIKMRSLIFNLRDKNNPGLRESVVSGEISAGRLCVMGPQDMASEERKAQDRKLAEENLFK 328
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ G A TD F+C+RCGQRKCTYYQMQTRSADEPMTT+VTCVNC+ RWKF
Sbjct: 329 ARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVNCNCRWKF 381
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 113/178 (63%), Gaps = 16/178 (8%)
Query: 205 NDSSRDKIRELLANALSKVTSEA----DEEIIDEVNACDPIRVAVSVESVMFEKLGRS-- 258
ND R+ +LL +L ++ E+ D +I D AV+VE+ + G+
Sbjct: 148 NDKVRNACLKLLYQSL-EIGKESHVWNDSQIFD---------AAVAVEAAILSNQGKGSV 197
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
T + K RS+ NI+D+ NPDLR RV+ G++ ++LVTM+ EE+ASD+R+R+IE ++ +
Sbjct: 198 TADYRNKVRSLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTNEELASDKRKREIEELQMQ 257
Query: 319 ALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
LF+ + A TD F+C RC QRK YYQMQTRSADEPMTT+VTC NC+ +WKFC
Sbjct: 258 NLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWKFC 315
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 111/168 (66%), Gaps = 9/168 (5%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R+K EL+ +A+ + S AD E++ ++ A+++E+ +F++ G K K R+
Sbjct: 146 RNKTIELMYSAVG-LNSGADSELL--------LKRALAIETRIFDEYGSVNEGYKSKVRT 196
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N++ + NP LR+ V+ GE+T E+L TMS EEMAS+E Q + + E+ALF+ +
Sbjct: 197 LANNLKSKSNPGLRESVVSGELTIEKLCTMSVEEMASEEAQARDRKLAEEALFKARGATS 256
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
A A TD FKC +C RKCTY+QMQTRSADEPMTT+VTCVNC WKFC
Sbjct: 257 AQAETDMFKCGKCQGRKCTYFQMQTRSADEPMTTFVTCVNCGNHWKFC 304
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 109/177 (61%), Gaps = 14/177 (7%)
Query: 205 NDSSRDKIRELLANAL---SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRS--T 259
ND R+ +LL N+L +D +I D AV+VE+ + G+ T
Sbjct: 152 NDKVRNACLKLLYNSLEIGKDAHGWSDSQIFD---------AAVAVEAAILANQGKGAVT 202
Query: 260 GAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
+ K RS+ NI+D+ NPDLR RV+ ++ + LVTMS EE+ASD+R+R+IE ++ +
Sbjct: 203 TEYRNKVRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSNEELASDKRKREIEQLQMQN 262
Query: 320 LFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
LF+ + A TD F+C RC QRK YYQMQTRSADEPMTT+VTC NC+ +WKFC
Sbjct: 263 LFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWKFC 319
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 115/187 (61%), Gaps = 7/187 (3%)
Query: 190 QGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
Q TIA+ ++ + N+++RD+ R+++A L+ E + ++++ R+ VE
Sbjct: 152 QRTIAS----KIEQTNNATRDRSRDVIAYGLALAHCEGN---CEDISVTSLARIVEEVED 204
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
M EK K K R + FN++D KNPDLR+ + E+ L+ +S EE+ SDER+
Sbjct: 205 AMSEKWKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKREIDATTLIDLSSEELGSDERR 264
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
++I+E A E RG A+T FKC +CGQR CT+YQ+QTRSADEPMTT+VTCVNC
Sbjct: 265 AANQSIREHAEAEAVRGQRKEASTTAFKCGKCGQRACTFYQLQTRSADEPMTTFVTCVNC 324
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 325 ENRWKFC 331
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 10/174 (5%)
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
K ND +RD LL NA+ +S E +++ A+S+ES + + STG E
Sbjct: 117 KLNDKTRDTCLSLLYNAMVFDSSAPSELVMER---------ALSIESTVLDDNNGSTGEE 167
Query: 263 -KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K K RS+M N++D+KNP LR+ V+ G+ MS +MAS+ER++Q ++ LF
Sbjct: 168 YKKKVRSLMLNLKDKKNPSLREAVISGDTPAATFCRMSSADMASEERKQQDRALELSNLF 227
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + G A TD FKC RC QRKCTYYQMQTRSADEPMTT+VTC C+ RWKF
Sbjct: 228 KARGAGPQQAETDSFKCGRCKQRKCTYYQMQTRSADEPMTTFVTCTVCNNRWKF 281
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D++RDK EL+ + L+ + ++I + A +VE+ +F + G ++ K K
Sbjct: 133 DNTRDKCSELMYDGLASDSGAPSDQIASK---------AAAVETAVFNQFGSTSAEYKSK 183
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP LR+ ++ G+++P + TMS EMAS+ER+ + ++E+ F+
Sbjct: 184 IRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSSEMASEERRAADKRLQEENFFKSLA 243
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC NC RWKF
Sbjct: 244 AAEQEAETDGFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGNRWKF 293
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 111/177 (62%), Gaps = 18/177 (10%)
Query: 209 RDKIR----ELLANALS---KVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRS--T 259
+DK+R +LL AL + +D ++ D AV+VE+ + G+ T
Sbjct: 154 QDKVRNACLKLLYQALEIGKEQHGHSDSQVFD---------AAVAVEAAILANQGKGSVT 204
Query: 260 GAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
+ K RS+ NI+D+ NPDLR RV+ ++ ++LVTM+ EE+ASD+R+R+IE ++ +
Sbjct: 205 ADYRNKVRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTNEELASDKRKREIEELQMQN 264
Query: 320 LFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
LF+ + A TD F+C RC QRK YYQMQTRSADEPMTT+VTC NC+ +WKFC
Sbjct: 265 LFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWKFC 321
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 87/114 (76%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K K R + FN+RD KNPDLR + +GE++ + L+ ++PEE+ S+ER++ E I+E A +E
Sbjct: 13 KAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNERRQANEKIREFAEWE 72
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
RG + A+TD FKC +C QRKCTYYQ+QTRSADEPMTT+VTCVNC RWKFC
Sbjct: 73 AVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCGNRWKFC 126
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
Query: 243 VAVSVESVMFEKLGRS--TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
AV+VE+ + G+ T + K RS+ NI+D+ NPDLR RV+ ++ ++LVTM+
Sbjct: 182 AAVAVEAAILANQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTN 241
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EE+ASD+R+R+IE ++ + LF+ + A TD F+C RC QRK YYQMQTRSADEPM
Sbjct: 242 EELASDKRKREIEELQMQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPM 301
Query: 361 TTYVTCVNCSKRWKFC 376
TT+VTC NC+ +WKFC
Sbjct: 302 TTFVTCTNCNHKWKFC 317
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 168/343 (48%), Gaps = 61/343 (17%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPRE-KIQIVASNLLDIWKKIVIEETTRN 93
+D LK L++ P+T ++L ST++G + + K + ++ +A L+ WKK++ E +
Sbjct: 29 LDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDDEVTSLAKALIKSWKKLLDEPGGGD 88
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
K +SS T +V P G + + E S S++E V V
Sbjct: 89 KSLEEKRKESSTPTSLVSPTQG------------------SPEPREESNDSSSKNEPVDV 130
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
+ +I QAPS +DS R K R
Sbjct: 131 ----------------MPSISLISTFPQAPST-------------------SDSVRIKCR 155
Query: 214 ELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNI 273
E+L+ AL +A ++ I CD ++A +E +F + + K + RS + N+
Sbjct: 156 EMLSQAL-----QAGDDYIAIGADCD--QLAAQIEEYIFCEFKNTDPKYKNRVRSRIANL 208
Query: 274 RDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATT 333
+D KNP+LRK VL G V+P+R+ M+ +EMASDE + +N+ ++A+ + Q T
Sbjct: 209 KDIKNPNLRKSVLCGNVSPDRMAKMTAQEMASDELKLIRKNLTKEAIRDHQVSQTGGTQT 268
Query: 334 DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
D F C +C +++CTY Q+QTRSADEPMTT+V C +C RWKFC
Sbjct: 269 DLFTCGKCKKKRCTYTQVQTRSADEPMTTFVFCNDCGNRWKFC 311
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 164/360 (45%), Gaps = 76/360 (21%)
Query: 25 SSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKK 84
SS GP+ S V L++L+ VT D+L T+ G + L H ++ A ++ WK
Sbjct: 18 SSKGPKHSDTVGLLQKLRGHGVTEDLLKETKAGLAVGKLRSHANAQVAETAKEVVRRWKA 77
Query: 85 IVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGS 144
V G KS G P G A KV + ++ GS
Sbjct: 78 EV------------EGQKSEKKAGSSSPSGG---------AKKV----NPKPIQTSVPGS 112
Query: 145 VSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKL-----T 199
S + AP+ P T +P L T
Sbjct: 113 TS-------------------------------SKSPAPATAGPH--TPLSPSLVRTTAT 139
Query: 200 QLIKCNDSS---RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVE-SVMFEKL 255
+K NDS RD LL +AL+ ++ ++I ++A +E V+
Sbjct: 140 DGVKLNDSGDEKRDTCMRLLYDALASDSTAPSDQIA---------KIARKIEEQVLSLNK 190
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI 315
S + K RS+ N++++ NP LR+ V+ GE++ RL TMS +EMAS+ERQ + + I
Sbjct: 191 NNSGNPYRTKIRSLYLNLKEKSNPGLREAVVSGELSVPRLCTMSVQEMASEERQAESKRI 250
Query: 316 KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+E+ LF+ + EA A TD FKC RCG RK Y Q QTRSADEPMTT+VTCVNC RWKF
Sbjct: 251 EEQNLFKAKGAEEAGAETDAFKCFRCGLRKTRYTQAQTRSADEPMTTFVTCVNCGNRWKF 310
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 120/232 (51%), Gaps = 41/232 (17%)
Query: 165 DRGEAVKVEKIIEEEKQA----PSVRKP------------SQGTIATPKLTQLI----KC 204
D GEA + + + E A P +R P G P I +C
Sbjct: 94 DGGEAETPDAVAQREAPASTSQPGLRAPLALTGKASAMTSGVGAGQRPTCASFIVDPPRC 153
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
+ +RDK+R +LA AL+ + I D ++ +A S SV +G K
Sbjct: 154 GNDTRDKVRVMLAEALAVGFNSGGAVIEDALHE----LLAGSGSSV--------SGEYKA 201
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS+ FN++D KNPDLR+RVL G + PE LV MS EE+ASDE++R+ +KE E
Sbjct: 202 KARSLCFNLKDAKNPDLRERVLSGSIPPESLVRMSAEELASDEQKRKNREMKEWLAKEAT 261
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
RG ATTD F+C RC QRKCTYY PMTT+VTC NC +RWKFC
Sbjct: 262 RGVNNAATTDMFQCGRCKQRKCTYY---------PMTTFVTCTNCGQRWKFC 304
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 84/113 (74%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K K R + FN++D KNPDLR+ V G ++P+ L+ + PEE+ SDER+ + I+E A E
Sbjct: 2 KAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSDERRNENAAIREAATAE 61
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
RG + A+TD FKC +CGQRKCTYYQ+QTRSADEPMTT+VTCVNC RWKF
Sbjct: 62 AVRGQKQQASTDAFKCGKCGQRKCTYYQLQTRSADEPMTTFVTCVNCDNRWKF 114
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 11/173 (6%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGR--STGAE 262
D +RD R L+ NAL + S A E+I ++ A++VE F G+ S
Sbjct: 116 GDKTRDSTRPLIYNALC-IDSGAPSELI--------LKRAIAVEEAAFTICGKGESNSDY 166
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++ ++NP LR+ V+ G+++ E+LVTMS +MAS+ER+++ + I+E+ LF+
Sbjct: 167 RNKMRSLFLNLKGKENPSLRQGVVSGDISAEKLVTMSSSDMASEERKQKDKAIEEENLFK 226
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
GE A TD F+C +C QRK Y Q QTRSADEPMTT+VTCVNC RWKF
Sbjct: 227 SLGAGEQQAETDAFQCGKCKQRKTIYRQAQTRSADEPMTTFVTCVNCGNRWKF 279
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 61/346 (17%)
Query: 32 SRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEET 90
S +D LK L+S P+T ++L ST++G + + K E++ +A +L+ WKK++ E
Sbjct: 26 SGALDLLKELRSVPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDE-- 83
Query: 91 TRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSET 150
P SG +KTS E K + T +S S+
Sbjct: 84 ---------------------PGSG-----EKTSE---------EKRKEQSTPIISSSQE 108
Query: 151 VQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRD 210
++E+ S + + P P A P+ +D R
Sbjct: 109 SPDAREESCSSSNTN-------------SRSEPLDDTPGSFVNAFPRAAST---SDPIRV 152
Query: 211 KIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM 270
K RE+LANAL + ++ I CD + +E +F++ + K + RS +
Sbjct: 153 KCREMLANAL-----QTGDDYIAIGADCD--ELGAQIEDFIFQEFKNTDMKYKNRVRSRI 205
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEAT 330
N++D KNP+LR+ VL G +TPER+ M+ EEMASDE + +N+ ++A+ + Q
Sbjct: 206 SNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDELKEIRKNLTKEAVRDHQMATTGG 265
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C + CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 266 TQTDLFTCGKCKGKNCTYTQVQTRSADEPMTTFVFCNGCGNRWKFC 311
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 101/170 (59%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D++RDK EL+ +AL +S E I+ A VE + G +T A K K
Sbjct: 132 DTTRDKCIELVYDALVNDSSAPVELILSR---------ARGVEKCVHHDNGGTTAAYKQK 182
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP R+ V+ G+V E+L M+ E+MAS+ER+ IKE+ LF+
Sbjct: 183 IRSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKSLS 242
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QR+C Y Q QTRSADEPMTT+VTC NC RWKF
Sbjct: 243 AAEQAAETDAFQCGRCKQRQCRYRQAQTRSADEPMTTFVTCTNCGNRWKF 292
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 101/170 (59%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D++RDK EL+ +AL +S E I+ A VE + G +T A K K
Sbjct: 132 DTTRDKCIELVYDALVNDSSAPVELILSR---------ARGVEKCVHHDNGGTTAAYKQK 182
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP R+ V+ G+V E+L M+ E+MAS+ER+ IKE+ LF+
Sbjct: 183 IRSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKSLS 242
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QR+C Y Q QTRSADEPMTT+VTC NC RWKF
Sbjct: 243 AAEQAAETDAFQCGRCKQRQCRYRQAQTRSADEPMTTFVTCTNCGNRWKF 292
>gi|388501372|gb|AFK38752.1| unknown [Medicago truncatula]
Length = 204
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 129/221 (58%), Gaps = 39/221 (17%)
Query: 5 LVELFDAAKKAAD-SAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
LVEL++AAKKAAD S + D S E +RC+DAL++LK+FPV Y +LV+TQVGK L+ L
Sbjct: 9 LVELYEAAKKAADASTSTDNSPS---EETRCLDALEQLKNFPVNYKILVNTQVGKHLKTL 65
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKT 123
TKHPRE I+ A +L+ IWK ++I+ET++N KNG++ K T G + K K+QK+
Sbjct: 66 TKHPRENIRAFAVDLIAIWKDVIIKETSKN-KNGASDSKVESTNG----ERAKAGKLQKS 120
Query: 124 SAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEA------VKVEKI-- 175
+VKVEK E+ +VEK NG S + G VK+EK
Sbjct: 121 PSVKVEK-----------------GESAKVEKVNGNGSSKLSSGNVKAQNVDVKIEKTDR 163
Query: 176 -----IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDK 211
+EEK + +K S A PKL +IK NDS+RDK
Sbjct: 164 TSNIKAKEEKPVSAAKKISSSAAAPPKLKTMIKSNDSARDK 204
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 73 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 125
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + DK S D+ +K SA+ + A+ + + +R
Sbjct: 126 --DGPSTDKDS-------------DEKKKESAISSQNSPEAKEESSSSSNASNR------ 164
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K+ETN + I +APS +DS R K R
Sbjct: 165 -KEETNAS-----------DSFIPSFPRAPST-------------------SDSVRMKCR 193
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E ++++L + K + RS
Sbjct: 194 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQELRNTDMKYKNRVRSR 242
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 243 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 302
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 303 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 349
>gi|405121407|gb|AFR96176.1| positive transcription elongation factor [Cryptococcus neoformans
var. grubii H99]
Length = 333
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 112/183 (61%), Gaps = 15/183 (8%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRV----AVSVESVMFEKLGRSTG- 260
DS RDK ++ +AL+ + S A E +ID + I++ AV +E + + STG
Sbjct: 152 DSVRDKCVVMIYDALA-LDSTAVERLIDATQIIE-IKILKERAVGIERAANKAMNFSTGN 209
Query: 261 ---AEKL-----KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQI 312
A +L + RS+ N++D+ NP LR ++LG V+ E++ +MS +EMAS+ +
Sbjct: 210 DYRANQLAKSEQEMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESVRMLK 269
Query: 313 ENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKR 372
E I LF+ + G A TD FKC RC QRKCTYYQMQTRSADEPMTT+VTC NC+ R
Sbjct: 270 EKIASDNLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMTTFVTCTNCNNR 329
Query: 373 WKF 375
WKF
Sbjct: 330 WKF 332
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 105/170 (61%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D +RDK ELL +AL+ S A E+I + A + E +F +TG K K
Sbjct: 138 DKTRDKCIELLYDALA-FDSGAPSELI--------FQRAKAAEDAVFHTFNGTTGDYKTK 188
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS++ N++D+KNP LR+ V+ G++ +L M+ ++MAS+ER+ + IKE+ +F+
Sbjct: 189 IRSLVVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQDMASEERKNADKKIKEENMFKALG 248
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC C+ RWKF
Sbjct: 249 AEEQQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWKF 298
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 106/173 (61%), Gaps = 10/173 (5%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEK 263
++S R K RE++ N+L ++ E A P VA + E ++FE+ + K
Sbjct: 137 DESVRGKCREMIVNSL---------QVQGEFEAVTKPEEVAAACEQLIFEEFKDTNVKYK 187
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N+RD KNP L+ RVL GE++P RL M+ EEMASDE ++ + ++ + E
Sbjct: 188 QRIRSRVNNLRDPKNPMLKVRVLGGEISPARLAVMTSEEMASDEMKKLRQEFTKEGIREA 247
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q A T+ FKC RCG+R+ TY Q+QTRSADEPMTT+V C+NC RWKFC
Sbjct: 248 QMAKNAGTKTNLFKCGRCGKRETTYNQLQTRSADEPMTTFVYCMNCGNRWKFC 300
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPRE-KIQIVASNLLDIWKKIVIEETTRN 93
VD L +LK P+T + L T++G + + K +Q +A +L+ +WKK++ E++ +
Sbjct: 30 VDLLTKLKDLPITLECLQKTRIGMSVNTMRKKSNNSNVQTLAKSLIKLWKKLLPEKSGSD 89
Query: 94 KK--NG 97
KK NG
Sbjct: 90 KKADNG 95
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + DK S D+ +K A+ + A+ + + +R
Sbjct: 78 --DGPSTDKDS-------------DEKKKEPAISSQNSPEAKEESSSSSNASNR------ 116
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K+ETN + I +APS +DS R K R
Sbjct: 117 -KEETNAS-----------DSFIPSFPRAPST-------------------SDSVRMKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E ++++L + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQELRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 157/344 (45%), Gaps = 65/344 (18%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPRE-KIQIVASNLLDIWKKIVIEETTRN 93
+D L +L+ P+ VL T++G + K +E ++ +A +++ WKK + + +
Sbjct: 29 LDMLNQLRKLPMNLQVLTKTKIGVTVNQFRKSVKEDEVVNLAKSIIKGWKKFLSNDNNK- 87
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
G SS+ + DS D S+ SE
Sbjct: 88 ------GSSSSLNPSAQEEDSNSKD-------------------------SMPASEPPTP 116
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
+ T D D AP +R+ S ++ +D R K R
Sbjct: 117 AESSTPPDLSSD---------------AAPRLRRMSSSA-------EVDDTSDPVRIKCR 154
Query: 214 ELLANALSKVTSEADEEIIDEVNACDP-IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFN 272
ELL AL + E C P +A +E ++ + + K + RS + N
Sbjct: 155 ELLTKAL---------QTPPEKEGCAPACELAAGIEQSIYNEFKNTEMKYKTRVRSRVAN 205
Query: 273 IRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATAT 332
+RD KNP LR+ V+ G + PER+ +M+ EEMASD+ ++ E ++A+ + Q +
Sbjct: 206 LRDSKNPKLREGVMYGFIPPERMASMTSEEMASDDLKKLREKFTKEAINDHQMAQQGGTE 265
Query: 333 TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD FKC RCG+R+C Y Q+QTRSADEPMTT+V CV+C RWKFC
Sbjct: 266 TDFFKCGRCGKRRCQYNQVQTRSADEPMTTFVLCVSCGNRWKFC 309
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 10/172 (5%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF-EKLGRSTGAEK 263
+DS+R+ L AL+ ++ ++I+ VA S+E+ +F ++ + +
Sbjct: 123 DDSTRNASISALYTALAIERGDSSQQILS---------VAKSIEAEVFKDEYSKVADGYR 173
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
K R+ + N+R++KNP+LR R+L G++TP + V MSP EMA + +++IE + ++ LF+
Sbjct: 174 NKLRTFVMNLRNKKNPELRDRILSGQITPGKFVKMSPNEMAPETLKKEIEKLHKQNLFDA 233
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q E A TD+F C +C +K +YYQMQTRSADEP+TT+ TC NC RWKF
Sbjct: 234 QGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWKF 285
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
+DS R K RELLANAL +A ++ I CD + +E V+F++ + K
Sbjct: 146 SDSIRIKCRELLANAL-----QAGDDHIAIGADCD--ELGAQIEEVIFQEFKNTDMKYKN 198
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP+LR+ VL G VTPER+ MS EEMASDE + +N+ ++A+ + Q
Sbjct: 199 RVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMSAEEMASDELREMRKNLTKEAVRDHQ 258
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C + CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 259 MATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMTTFVFCNECGNRWKFC 310
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 116/191 (60%), Gaps = 13/191 (6%)
Query: 188 PSQGTIATPKL--TQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
P+ G T KL + +D +RDK EL+ +AL+ +S A +++ ++ A
Sbjct: 139 PTNGAPRTAKLDGISMDVTSDKTRDKCIELIYDALASDSS-APADLV--------LKRAR 189
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+ES + + R+TGAE K K RS N++D+ NP LR V+ GE+ E+ M+ +MA
Sbjct: 190 GIESDVLSQF-RTTGAEYKAKIRSFFVNLKDKNNPGLRAAVVSGELPVEKFAKMTSADMA 248
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYV 364
S+ER+ Q + I+E+ LF+ E A TD F+CSRC QRKC Y Q QTRSADEPMTT+V
Sbjct: 249 SEERRAQDQKIREENLFQSLGAEEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTTFV 308
Query: 365 TCVNCSKRWKF 375
TC C+ RWKF
Sbjct: 309 TCTVCNNRWKF 319
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + DK S D+ +K A+ + A+ + + +R
Sbjct: 78 --DGPSTDKDS-------------DEKKKEPAISSQNSPEAKEESSSSSNASNR------ 116
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K+ETN + I +APS +DS R K R
Sbjct: 117 -KEETNAS-----------DSFIPSFPRAPST-------------------SDSVRMKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E ++++L + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQELRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ ++ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASDELKEMRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 10/171 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF-EKLGRSTGAEKL 264
DS+R+ L AL+ + E+I+D VA ++E +F ++ A +
Sbjct: 51 DSTRNASVSALYTALAIERDDPSEKILD---------VARNIELGVFKQEYSAVNDAYRN 101
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K R++ N+R++KNPDLR R+L G++ P + +TM+P EMA + +++IE + ++ LF+ Q
Sbjct: 102 KLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPNEMAPESLKQEIEKLNKQNLFDAQ 161
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD+F C +C +K +YYQMQTRSADEP+TT+ TC NC RWKF
Sbjct: 162 GATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWKF 212
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 106/171 (61%), Gaps = 10/171 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF-EKLGRSTGAEKL 264
DS+R+ L AL+ + E+I+D VA ++E +F ++ A +
Sbjct: 51 DSTRNASVSALYTALAIERDDPSEKILD---------VARNIELGVFKQEYSAVNDAYRN 101
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K R++ N+R++KNPDLR R+L G++ P + +TM+P EMA + +++IE + ++ LF+ Q
Sbjct: 102 KLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPNEMAPESLKQEIEKLNKQNLFDAQ 161
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD+F C +C +K +YYQMQTRSADEP+TT+ TC NC RWKF
Sbjct: 162 GATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWKF 212
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 16/176 (9%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
ND R+K ++L +AL +E+ D + DP +A+ +E +FE + R TG
Sbjct: 138 NDEMRNKCIQMLLSALQ------SKELPDGTH--DPEELAIKIEKKLFE-VHRGTGD--- 185
Query: 265 KYRSIM----FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
KYRS + FN+RD+KN LR+ VL G VTP + M+ EEMASDE + Q E ++A+
Sbjct: 186 KYRSAVRSRVFNLRDKKNAALRENVLTGVVTPAKFAVMTSEEMASDEMRSQREKFTKQAI 245
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q + +D FKC +CG++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 246 EEHQMSVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTFVFCRECGNRWKFC 301
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 120/216 (55%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E Q PS ++P +TP++T + C D+ RDK RE+L AL
Sbjct: 99 RGTPLPTSSRDASEAQDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRDKCREMLTAAL 157
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
++ D I D R++ +E +F +G + K + RS + N++D KNPD
Sbjct: 158 Q---TDHDHVAI----GADCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPD 210
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+R+ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 211 LRRNVLCGAITPQRIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 270
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 271 CRKKSCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 306
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 8 LFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHP 67
L D A +A G S G + +D L+ LK+ P+T +L ST+VG + L K
Sbjct: 9 LLDWAVRAPQLPKTRGKSPGCLQEG-AMDLLRELKAMPITLHLLQSTRVGMSVNALRKQS 67
Query: 68 R-EKIQIVASNLLDIWKKIVIEETTRNKKNG 97
E++ +A +L+ WKK++ + ++ G
Sbjct: 68 SDEEVIALAKSLIKSWKKLLDASDAKARERG 98
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 177/353 (50%), Gaps = 36/353 (10%)
Query: 25 SSGGPEVSRCVDALKRLKSFPV-TYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWK 83
+SG + V L++L++ + + ++L +++ G + L P + +A +L+ WK
Sbjct: 16 ASGKNQTEDVVRILQKLQAEVIPSEELLKASKAGIAVGKLRSVPSPGVANLAKDLVKKWK 75
Query: 84 KIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTG 143
+ VIEE R +K GD VK ++GK K + +++ V T + ++
Sbjct: 76 E-VIEENKRKRKR-EEGDG-------VKEEAGKKVKAEPSTSAIVSSNGTPAAMSPDRKP 126
Query: 144 SVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIK 203
+ + ++ + ++ N + I+ + P K S G T K
Sbjct: 127 EI---KDIKPKVEQPNSGASSSSPPKRPPLSTIDSSRTTPRDSK-SDGVAGTLKAEAETG 182
Query: 204 CNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE- 262
++S RDK E++ NAL+ ++ +V++E+ +F++ +G E
Sbjct: 183 GDESVRDKCVEMIYNALAGDST---------------AERSVAIEAAVFKQQKSQSGNEY 227
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++D+ NP LR ++LG +T E+L ++S E+MAS+ + E I LF+
Sbjct: 228 RAKMRSLFLNLKDKGNPGLRNEIVLGYLTAEKLASLSKEDMASESIRAMNEKIANDNLFK 287
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ GE A TD FKC RC QRKCTYYQMQTRSADEPMT NC RWKF
Sbjct: 288 AKAVGETQAETDAFKCGRCQQRKCTYYQMQTRSADEPMT------NCGNRWKF 334
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 97/143 (67%), Gaps = 5/143 (3%)
Query: 233 DEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTP 292
+EV AC A ++E+ +++ + G + K RS+ N++D KNP LR V+ G+++
Sbjct: 157 NEVLAC-----AKAIENEVYKMENGTGGNYRPKMRSLYINLKDPKNPGLRGNVISGKISA 211
Query: 293 ERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQ 352
ERL MSP+EMASDE +++IE ++++ LF + E A TD+F C +C Q+K +YYQMQ
Sbjct: 212 ERLCRMSPQEMASDELKKEIEEMEKQNLFAARGATEQRAVTDRFTCGKCKQKKVSYYQMQ 271
Query: 353 TRSADEPMTTYVTCVNCSKRWKF 375
TRSADEP+TT+ TC NC RWKF
Sbjct: 272 TRSADEPLTTFCTCENCGTRWKF 294
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 173/350 (49%), Gaps = 36/350 (10%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++ T
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTK 86
Query: 94 KKNGSTGDKSSVTTGV----VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSE 149
+ + G+ KP++G +K K + SRS
Sbjct: 87 GEREAREKAKKKEKGLGSSGWKPEAGLSPPRKKEGG----------EPKTRRDSVDSRSS 136
Query: 150 TVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---ND 206
T K+ + S R + E + PS PS T A P + L C D
Sbjct: 137 TTSSPKRPSLERSNSSRSKV--------ETPKTPS--SPSTPTFA-PAVCLLASCYLTGD 185
Query: 207 SSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
S RDK E+L+ AL +A+++ D CD ++A +E ++++L + + +
Sbjct: 186 SVRDKCVEMLSAAL-----KAEDDFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRV 238
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS + N++D +NP LR+ VL G ++PE + M+ EEMASDE + + ++A+ E Q
Sbjct: 239 RSRISNLKDPRNPGLRRNVLSGTISPELIAKMTAEEMASDELRELRNAMTQEAIREHQMA 298
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD +CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 299 KTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 348
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 127/219 (57%), Gaps = 16/219 (7%)
Query: 163 VMDRGEAVKVEKIIEEEKQA-----PSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLA 217
++D + VK + I E + ++KPS ++A + K + + R + ++++A
Sbjct: 80 LLDSQDKVKAKSIPENDSSTVISSNQDIKKPSSNSVAMKSFNK-NKGDAAVRSQCQQMIA 138
Query: 218 NALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEK 277
++L SE + + DP +A ++E+ +F + + K +S + N+RD++
Sbjct: 139 SSLK---SENNPDY-------DPTNIAAAIENEIFMCFKDTNIKYRNKIKSKVMNLRDKR 188
Query: 278 NPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFK 337
NP+L + V+ G +TPER M+ EEMASDE +++ + I E+A+ E Q A T QFK
Sbjct: 189 NPELCQLVIEGVITPERFAKMTAEEMASDEMKKERKKITEEAIKEHQLATTAGTATGQFK 248
Query: 338 CSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C +CG+R TY Q+QTRSADEPMTT+V C+ C RWKFC
Sbjct: 249 CGKCGKRNTTYNQVQTRSADEPMTTFVYCIECGNRWKFC 287
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 24 VSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTK-HPREKIQIVASNLLDIW 82
V+ G D L +LK P+T D+L T++G + L K RE +QI+A +L+ W
Sbjct: 18 VADGNSNNESASDLLNQLKKLPITLDILQKTRIGMTVNVLRKASDREDVQIIAKSLIKSW 77
Query: 83 KKIVIEETTRNKKNGSTGDKSSVTTG---VVKPDSGKI 117
KK++ + K+ D S+V + + KP S +
Sbjct: 78 KKLLDSQDKVKAKSIPENDSSTVISSNQDIKKPSSNSV 115
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + DK S D+ +K A+ + A+ + + +R
Sbjct: 78 --DGPSTDKDS-------------DEKKKEPAISSQNSPEAKEESSSSSNASNR------ 116
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K+ET+ + I +APS +DS R K R
Sbjct: 117 -KEETDAS-----------DSFIPSFPRAPST-------------------SDSVRMKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E ++++L + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQELRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEIRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 99/170 (58%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D +RDK EL+ +AL+ + E+I+ A +ES + + + K K
Sbjct: 137 DKTRDKCMELIYDALACDSGAPSEQILGRARA---------IESAVVAQFSGPSVEYKSK 187
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP LR+ ++ G+++ E+ MS EMAS+ER+ IKE F+
Sbjct: 188 IRSLFVNLKDKNNPGLRESIVSGDLSVEKFGKMSSAEMASEERKAADNKIKEDNFFKSLG 247
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTCVNC RWKF
Sbjct: 248 AAEQEAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCVNCGNRWKF 297
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 103/174 (59%), Gaps = 13/174 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
ND R+ +LL N+L E+ D A+ +E + K+G ST
Sbjct: 140 NDRVRNACLKLLYNSL---------EVQDHAEPQTVFASAMKIEEAAYTKIGASTTNNDY 190
Query: 265 --KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K RS+ N++D+ NP+LR++VL G + P LV M EE+AS + Q E+I+++ L
Sbjct: 191 RGKVRSLSLNLKDKNNPELRQKVLEGHIDPGMLVVMRSEELASKSLKEQQESIRQQNLHN 250
Query: 323 CQRGGEAT-ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+G EA A TD F+C +C QRK YYQMQTRSADEPMTT+VTCVNC+ +WKF
Sbjct: 251 A-KGAEAQEAETDAFQCGKCKQRKTRYYQMQTRSADEPMTTFVTCVNCNHKWKF 303
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 99/170 (58%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D +RDK EL+ +AL+ + E+I+ A +ES + + + K K
Sbjct: 145 DKTRDKCAELIYDALAFDSGAPSEQILSRAKA---------IESTVLSQFNGTNAEYKAK 195
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP LR+ V+ G++ +R MS +EMAS+ER+ I E+ LF+
Sbjct: 196 IRSLFVNLKDKNNPSLRESVVAGDLPVQRFCKMSSQEMASEERKAADNRIMEENLFKSLG 255
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC C+ RWKF
Sbjct: 256 AEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWKF 305
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 101/170 (59%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS+RDK EL+ +AL+ S A E+I ++ A ++E+ + T A K K
Sbjct: 133 DSTRDKCTELIYDALAS-DSGAPVELI--------LKHAKAIEASVLADCDGVTAAYKSK 183
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP LR+ ++ GE+ E+ M+ +EMAS+ER+ I+ +
Sbjct: 184 IRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEMASEERKAADNKIRAENFHNSLA 243
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+CSRC QRKC Y Q QTRSADEPMTT+VTC NC RWKF
Sbjct: 244 AAEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGNRWKF 293
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
+ D RDK ELL +AL+ ++ E ++ + A VE +F G +
Sbjct: 134 RTGDKVRDKCVELLYDALASDSTAPIEMVL---------KRASEVEEAVFNLKGGANQEY 184
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++D+ NP L++ ++ GE+ R M+ EEMAS+E++ ++ I E+ LF+
Sbjct: 185 RGKIRSLYVNLKDKNNPTLKEDIVSGEIPASRFAVMTSEEMASEEQKAALKKIHEENLFK 244
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
EA A TD F+CS+C QRKC Y Q QTRSADEPMTT+VTCV C RWKF
Sbjct: 245 SLAAQEADAETDAFQCSKCKQRKCRYRQAQTRSADEPMTTFVTCVVCGNRWKF 297
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 78 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 115
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 116 RKDETNAR-----------DTYVSSFPRAPST-------------------SDSVRLKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEMRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 78 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 115
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 116 RKDETNAR-----------DTYVSSFPRAPST-------------------SDSVRLKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 11 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 63
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 64 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 101
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 102 RKDETNAR-----------DTYVSSFPRAPST-------------------SDSVRLKCR 131
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 132 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 180
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 181 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 240
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 241 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 287
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 163/347 (46%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 78 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 115
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + +APS +DS R K R
Sbjct: 116 RKDETNARDT-----------YVSSFPRAPST-------------------SDSVRLKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 161/347 (46%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHP-REKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAICKQSTNEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + DK S D+ +K A+ + A+ + +R
Sbjct: 78 --DGPSTDKDS-------------DEKKKEPAISSQNSPEAKEESSSSSNGSNR------ 116
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K+ETN + I +APS +DS + R
Sbjct: 117 -KEETNAS-----------DSFIPSFPRAPST-------------------SDSVPMRCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
+LA AL + ADEE + +E ++++L + K + RS
Sbjct: 146 GMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQELRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMHKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
Query: 241 IRVAVSVESVMF--EKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ VA +E+ ++ EKL S + + K R+ N+R++KNPDLR R+L G+++PE + M
Sbjct: 160 VAVAKDIENEVYRSEKLSIS-DSYRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKM 218
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
SP +MA + +++IE + ++ LFE Q E A TD+F C +C ++ +YYQMQTRSADE
Sbjct: 219 SPNDMAPEALKKEIEKLHKQNLFEAQGATEKRAVTDRFTCGKCKHKRVSYYQMQTRSADE 278
Query: 359 PMTTYVTCVNCSKRWKF 375
P+TT+ TC NC RWKF
Sbjct: 279 PLTTFCTCENCGNRWKF 295
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 78 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 115
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 116 RKDETNAR-----------DTYVSSFPRAPST-------------------SDSVRLKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 78 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 115
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 116 RKDETNAR-----------DTYLSSFPRAPST-------------------SDSVRLKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
Query: 241 IRVAVSVESVMF--EKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ VA +E+ ++ EKL S + + K R+ N+R++KNPDLR R+L G+++PE + M
Sbjct: 160 VAVAKDIENEVYRSEKLSIS-DSYRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKM 218
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
SP +MA + +++IE + ++ LFE Q E A TD+F C +C ++ +YYQMQTRSADE
Sbjct: 219 SPNDMAPEALKKEIEKLHKQNLFEAQGATEKRAVTDRFTCGKCKHKRVSYYQMQTRSADE 278
Query: 359 PMTTYVTCVNCSKRWKF 375
P+TT+ TC NC RWKF
Sbjct: 279 PLTTFCTCENCGNRWKF 295
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 36/347 (10%)
Query: 38 LKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRNKKN 96
LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++ +
Sbjct: 30 LKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPKGEK 89
Query: 97 GSTGDKSSVTTGV----VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQ 152
G DK+ G+ KP++G + + AE K + S+S
Sbjct: 90 GEERDKAKKEKGLDCSNWKPETG----------LSPPRKKRAEEPKERRDSVDSKSSATS 139
Query: 153 VEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---NDSSR 209
K+ + M+R + K + E + P+ PS T A P + L C DS R
Sbjct: 140 SPKRPS-----MERSNSGKSK---AETPKTPT--SPSTPTFA-PSVCLLAPCYLTGDSVR 188
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
DK E+L+ AL +A+++ D CD ++A +E ++++L + + + RS
Sbjct: 189 DKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSR 241
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 242 ISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTG 301
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 302 GTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 348
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
D++RDK EL+ +AL+ + E+I+ + A +E+ G T A K
Sbjct: 141 GDATRDKCLELIYDALAFDSGAPSEQILGKAKA---------IEAAALTDNGGVTAAYKA 191
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K R++ N++D+ NP LR+ V+ G++ R M+ EMAS+ER+ I+E+ LF+
Sbjct: 192 KIRTLFVNLKDKNNPGLRESVVAGDLPVTRFCKMTSAEMASEERKAADNRIREENLFKTL 251
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC C+ RWKF
Sbjct: 252 GAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWKF 302
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 112/187 (59%), Gaps = 12/187 (6%)
Query: 194 ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
+TP++T + C D+ R+K RE+L+ AL ++ D I D R++ +E
Sbjct: 178 STPRITTFPPVPVTC-DAVRNKCREMLSAALQ---TDHDHVAI----GADLERLSAQIEE 229
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
+F +G + K + RS + N++D KNPDLR+ VL G +TP+++ M+ EEMASDE +
Sbjct: 230 CIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELK 289
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ + ++A+ E Q TD F CS+C ++ CTY Q+QTRS+DEPMTT+V C C
Sbjct: 290 EIRKAMTKEAIREHQMARTGGTQTDLFTCSKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 349
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 350 GNRWKFC 356
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 84 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKT 143
Query: 94 KKNG 97
++ G
Sbjct: 144 RERG 147
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 104/182 (57%), Gaps = 21/182 (11%)
Query: 199 TQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRS 258
T L D++R +L A L +DE+ + AV +ES +FE G +
Sbjct: 161 TSLPHLADATRSTTLKLFAEGLK----------MDEITELHYNQAAVEIESQLFETYGGA 210
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS----DERQRQIEN 314
K+K RSI+FN++ N L+K +L +T R TM EMA+ +ER+R ++
Sbjct: 211 NSDYKVKARSIIFNLKS--NHLLKKNILSKTLTVTRFCTMDATEMANKELKEERERMLKY 268
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+E A ATTDQF+C +C QRKCTY+Q+QTRSADEP+TT+VTCVNC+ RWK
Sbjct: 269 SREAATL-----SREAATTDQFQCGKCKQRKCTYFQLQTRSADEPLTTFVTCVNCNNRWK 323
Query: 375 FC 376
FC
Sbjct: 324 FC 325
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+ VA +ES +F+ + + A + K R+ + +R++KNP+LR+R+L ++T ER + MS
Sbjct: 186 VAVAAEIESAVFKNEYLKVNEAYRNKLRTFVMQLRNKKNPELRERLLTRQITAERFIKMS 245
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA +E +++IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 246 PNEMAPEELKKEIEKMHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 305
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 306 LTTFCTCENCGNRWKF 321
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 174/348 (50%), Gaps = 33/348 (9%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQI-VASNLLDIWKKIV-IEETTR 92
+D LK+L S ++ +L +T++G + + KH +K+ + +A L+ WK+++ TT+
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKVLVSLAKVLIKNWKRLLDSPRTTK 86
Query: 93 NKKNGSTGDKSSVTTGV--VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSET 150
++ + G KP++G +K K + SRS T
Sbjct: 87 GEREEREKARREEGLGCSDWKPEAGLSPPRKKGGG----------EPKTRRDSVDSRSST 136
Query: 151 VQVEKKETNGDSVMDRGEAVK--VEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSS 208
K+ + ++R + K VE + P+ +A LT DS
Sbjct: 137 TSSPKRPS-----LERSNSSKSKVETPTTPSSPSTPTFAPAVCLLAPCYLT-----GDSV 186
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
RDK E+L+ AL +A++ D CD ++A +E ++++L + + + RS
Sbjct: 187 RDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRS 239
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N++D +NP LR+ VL G ++PE + M+ EEMASDE + + ++A+ E Q
Sbjct: 240 RISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 299
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD +CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 300 GGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 347
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+R+A +ES +F+ + + + R+ N+R++KNP+LR R+L G++TP + M+
Sbjct: 173 LRIATEIESEVFKSEYSNVNDNYRNRLRTFTMNLRNKKNPELRARLLSGQITPSSFIKMT 232
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA + +++IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 233 PNEMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 292
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 293 LTTFCTCENCGNRWKF 308
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+R+A+ +ES +++ + + + + + K RS N+R++KNP+LR+R+L ++ P + MS
Sbjct: 167 LRIAIEIESEVYKNEYSKISDSYRNKLRSFTMNLRNKKNPELRERILSKQILPAEFIKMS 226
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA + +++IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 227 PNEMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 286
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 287 LTTFCTCENCGNRWKF 302
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R+K RE+L AL
Sbjct: 65 RGMPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL 123
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
++ D I D +R++ +E +F +G + K + RS + N++D KNPD
Sbjct: 124 Q---TDHDHVAI----GADCVRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPD 176
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 177 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 236
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 237 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 272
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 100/175 (57%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +F++L +
Sbjct: 141 DSVRMKCREMLAAALKTGDDYIAIGADEE-----------ELGSQIEEAIFQELKNTDMK 189
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+R M+ EEMASDE + +N+ ++A+
Sbjct: 190 YKNRVRSRIANLKDTKNPNLRKNVLCGNILPDRFAKMTAEEMASDELKEMRKNLTKEAIR 249
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 250 EHQMAKTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 304
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 13/198 (6%)
Query: 184 SVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
S +KP T++TP++T I C D+ R+K RE+L AL ++ D + +
Sbjct: 110 SCKKPDPPRTLSTPRITTFPSVPITC-DAVRNKCREMLTLALQ---TDHDHKAV----GV 161
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
D ++ +E +F +G + K + RS + N++D KNP LR+ VL G +TP+++ M
Sbjct: 162 DCEHLSAQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 221
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ EEMASDE + + + ++A+ E Q TD F CS+C ++ CTY Q+QTRS+DE
Sbjct: 222 TSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCSKCKKKNCTYTQVQTRSSDE 281
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTTYV C C RWKFC
Sbjct: 282 PMTTYVVCNECGNRWKFC 299
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKI--VIEETT 91
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK+ V + T
Sbjct: 27 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKT 86
Query: 92 RNKKNGS 98
R++ G+
Sbjct: 87 RDQGRGT 93
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 99/173 (57%), Gaps = 19/173 (10%)
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPI-------RVAVSVESVMFEKLGRSTGAE 262
DK+R NALSK +I ACD A VE+ ++ + G + A
Sbjct: 125 DKLR----NALSK--------LIYNALACDATCDSNTIAEKARDVEAAVYNQNGCTNEAY 172
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K K R++ N++ + NP LR RVL GE+ P RL TMS +MAS+ER+ I+E+ + E
Sbjct: 173 KTKLRTLTANLKAKSNPGLRARVLKGELEPARLATMSVADMASEERKAADSKIREQTIHE 232
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC C+ RWKF
Sbjct: 233 SLGAAEQEAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWKF 285
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 109/196 (55%), Gaps = 11/196 (5%)
Query: 181 QAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDP 240
+ P PS+ T P L +DS R K RE+L L ++ D I D
Sbjct: 108 EVPKTTAPSKMTRFPP----LPVTSDSVRTKCREMLIAVLQ---TDGDHVAI----GADC 156
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
+A +E V+F +L + K + RS + N++D KNPDLRK VL G +TPE++ MS
Sbjct: 157 ELLAAQIEEVVFRELQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGIITPEQIAIMSC 216
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
EEMAS+E + + I + ++ E Q G +D F C +C ++ CTY Q+QTRSADEPM
Sbjct: 217 EEMASNELKEMRKEITKASIQEHQMGKTGGTQSDLFTCGKCKKKNCTYTQVQTRSADEPM 276
Query: 361 TTYVTCVNCSKRWKFC 376
TT+V C C RWKFC
Sbjct: 277 TTFVVCNECGNRWKFC 292
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 102/176 (57%), Gaps = 15/176 (8%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RELLA AL V AD +DE+ A +E +F++ +
Sbjct: 139 SDSVRIKCRELLAVALKTGDDHVAIGAD---VDELGA--------QIEEAVFQEFKNTDA 187
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LR+ VL G + P+ MS EEMASDE + +N+ ++A+
Sbjct: 188 KYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKEAI 247
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C NC RWKFC
Sbjct: 248 REHQMARTGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVFCNNCGNRWKFC 303
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHP-REKIQIVASNLLDIWKKIV 86
+D LK LKS P+T ++L ST++G + + K E + +A +L+ WKK++
Sbjct: 28 LDLLKELKSLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKSLIKSWKKLL 80
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPS-QGTIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R K RE+LA AL
Sbjct: 236 RGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRSKCREMLAAAL 294
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
+ D + + C+ R++ +E +F +G + K + RS + N++D KNPD
Sbjct: 295 -----QTDRDHVAIGADCE--RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPD 347
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 348 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKTMTKEAIREHQMARTGGTQTDLFTCGK 407
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 408 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 443
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 163/347 (46%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 78 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 115
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 116 RKDETNAR-----------DTYVSSFPRAPST-------------------SDSVRLKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEM SDE + +N+ ++A+ E Q
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMPSDELKEMRKNLTKEAIREHQMSKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 12/189 (6%)
Query: 192 TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
T+ TPK+T I C D+ R+K RE+L AL + D + I C+ ++ +
Sbjct: 120 TLTTPKITTFPPIPITC-DAVRNKCREMLTAAL-----QTDNDHIAIGADCE--HLSAQI 171
Query: 248 ESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
E +++ + + K + RS + N++D KNPDLRK VL G +TPE++ M+ EEMAS+E
Sbjct: 172 EEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNE 231
Query: 308 RQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCV 367
+ + + ++A+ E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C
Sbjct: 232 LKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCN 291
Query: 368 NCSKRWKFC 376
C RWKFC
Sbjct: 292 ECGNRWKFC 300
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
E+E+V + K + DG +D LK LKS P+T D+L ST++G +
Sbjct: 5 EEEIVRIAKRLDKMVTKKSTDGA----------MDLLKELKSMPITLDLLQSTRIGMSVN 54
Query: 62 PLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN---KKNGSTGDKS 103
L K +++ +A +L+ WKK++ +N K+N S S
Sbjct: 55 ALRKQSTDDEVISLAKSLIKSWKKLLDASEDKNDEKKRNSSLATSS 100
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 13/198 (6%)
Query: 184 SVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
S +KP T++TP++T I C D+ R+K RE+L AL ++ D + +
Sbjct: 66 SCKKPDPPRTLSTPRITTFPSVPITC-DAVRNKCREMLTLALQ---TDHDHKAV----GV 117
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
D ++ +E +F +G + K + RS + N++D KNP LR+ VL G +TP+++ M
Sbjct: 118 DCEHLSAQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 177
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ EEMASDE + + + ++A+ E Q TD F CS+C ++ CTY Q+QTRS+DE
Sbjct: 178 TSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCSKCKKKNCTYTQVQTRSSDE 237
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTTYV C C RWKFC
Sbjct: 238 PMTTYVVCNECGNRWKFC 255
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
+DS R K RE+LA+AL + ++ I CD + +E +F++ + K
Sbjct: 147 SDSIRIKCREMLASAL-----QTGDDYIAIGADCDEL--GAQIEECIFQEFKNTDMKYKN 199
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP+LR+ VL G VTPER+ M+ EEMASDE + +N+ ++A+ + Q
Sbjct: 200 RVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMTAEEMASDELKEMRKNLTKEAVRDHQ 259
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C + CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 260 MATTGGTQTDLFTCGKCKGKSCTYTQVQTRSADEPMTTFVFCNECGNRWKFC 311
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 174/348 (50%), Gaps = 33/348 (9%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIV-IEETTR 92
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++ TT+
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTK 86
Query: 93 NKKNGSTGDKSSVTTGV--VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSET 150
++ K G KP++G +K K + SRS T
Sbjct: 87 GEREEREKAKKEKGLGCSDWKPEAGLSPPRKKGGG----------EPKTRRDSVDSRSST 136
Query: 151 VQVEKKETNGDSVMDRGEAVK--VEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSS 208
K+ + ++R + K VE + P+ +A LT DS
Sbjct: 137 TSSPKRPS-----LERSNSSKSKVETPTTPSSPSTPTFAPAVCLLAPCYLT-----GDSV 186
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
RDK E+L+ AL +A++ D CD ++A +E+ ++++L + + + RS
Sbjct: 187 RDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIETHIYQELKSTDMKYRNRVRS 239
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N++D +NP LR+ VL G ++PE + M+ EEMASDE + + ++A+ E Q
Sbjct: 240 RISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 299
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD +CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 300 GGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 347
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 107/194 (55%), Gaps = 19/194 (9%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEI-----IDEVNACDPIR 242
PS G I + + +DS R K RELLA AL D+ I +DE+ A
Sbjct: 125 PSDGFITS--FPRAPSTSDSVRIKCRELLATALKT----GDDHIAIGADVDELGA----- 173
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+E +F++ + K + RS + N++D KNP+LR+ VL G + P+ MS EE
Sbjct: 174 ---QIEEAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEE 230
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
MASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT
Sbjct: 231 MASDELKEMRKNLTKEAIREHQMARTGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTT 290
Query: 363 YVTCVNCSKRWKFC 376
+V C C RWKFC
Sbjct: 291 FVFCNECGNRWKFC 304
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 12/170 (7%)
Query: 210 DKIRE----LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+IR LL NAL+ T E ++ +A D +++S +G++ A + K
Sbjct: 134 DRIRNNCIGLLYNALAMDTDEPSSVLLKTASAIDVQVLSMS--------MGKTDSAYRNK 185
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D++NP LRKRV+ G ++P+RL MS E+AS++R+++ ++++ LF Q
Sbjct: 186 MRSLYMNLKDKQNPQLRKRVISGAISPKRLSEMSSAELASEDRRKEDAKLEQENLFHAQG 245
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A TD F C +C Q+K +Y+QMQTRSADEPMTT+ C C RWKF
Sbjct: 246 AKPQKAITDLFTCGKCKQKKVSYFQMQTRSADEPMTTFCECTVCGNRWKF 295
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 89/138 (64%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +AV E +FE ++ + RS +FN+RD+KN LR+ VL+G VTPE+ M
Sbjct: 173 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 232
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ +EMASDE + Q E ++A+ E Q + +D FKC +CG++ CTY Q+QTRSADE
Sbjct: 233 TADEMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADE 292
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTT+V C C RWKFC
Sbjct: 293 PMTTFVFCRECGNRWKFC 310
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
I +A +ES +F+ + + A + K RS N+R++KNP+LR+RVL ++T + + M+
Sbjct: 164 ITIASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA + +++IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 224 PNEMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 283
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 284 LTTFCTCENCGNRWKF 299
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 117/203 (57%), Gaps = 13/203 (6%)
Query: 179 EKQAPSVRKPSQGTI-ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIID 233
E Q PS ++P + + P++T + C D+ R+K RELL AL + D + +
Sbjct: 114 EAQDPSRKRPELPRMPSAPRITTFPPVPVTC-DAVRNKCRELLTAAL-----QTDHDHMA 167
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
C+ + + +E +F +G + K + RS + N++D KNPDLR+ VL G +TP+
Sbjct: 168 VGADCEGL--SAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQ 225
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
++ M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+QT
Sbjct: 226 QIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCKKKNCTYTQVQT 285
Query: 354 RSADEPMTTYVTCVNCSKRWKFC 376
RS+DEPMTT+V C C RWKFC
Sbjct: 286 RSSDEPMTTFVVCNECGNRWKFC 308
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ PVT +L ST+VG + L K E + +A +L+ WKK++
Sbjct: 36 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEGVIALAKSLIKSWKKLL 88
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R+K RE+L AL
Sbjct: 92 RGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL 150
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
+ D + + C+ R++ +E +F +G + K + RS + N++D KNPD
Sbjct: 151 -----QTDHDHVAIGADCE--RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPD 203
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 204 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 263
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 264 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 299
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 87
Query: 94 KKNG 97
++ G
Sbjct: 88 RERG 91
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPS-QGTIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R+K RE+L AL
Sbjct: 92 RGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL 150
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
++ D I D R++ +E +F +G + K + RS + N++D KNPD
Sbjct: 151 Q---TDHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPD 203
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 204 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 263
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 264 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 299
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 87
Query: 94 KKNG 97
++ G
Sbjct: 88 RERG 91
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 116/199 (58%), Gaps = 13/199 (6%)
Query: 183 PSVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNA 237
PS ++P +TP++T + C D+ R+K RE+L AL + D + +
Sbjct: 109 PSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL-----QTDHDHVAIGAD 162
Query: 238 CDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
C+ R++ +E +F +G + K + RS + N++D KNPDLR+ VL G +TP+++
Sbjct: 163 CE--RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAV 220
Query: 298 MSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSAD 357
M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+QTRS+D
Sbjct: 221 MTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSD 280
Query: 358 EPMTTYVTCVNCSKRWKFC 376
EPMTT+V C C RWKFC
Sbjct: 281 EPMTTFVVCNECGNRWKFC 299
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 87
Query: 94 KKNG 97
++ G
Sbjct: 88 RERG 91
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A+ E +FE ++ + RS +FN+RD+KN LR+ VL+G VTPE+ M
Sbjct: 168 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 227
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ +EMASDE + Q E ++A+ E Q + +D FKC +CG++ CTY Q+QTRSADE
Sbjct: 228 TADEMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADE 287
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTT+V C C RWKFC
Sbjct: 288 PMTTFVFCRECGNRWKFC 305
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R+K ++ +AL +E+ D DP +AV E +FE ++ +
Sbjct: 79 DEVRNKCATMILDAL------LSKELPD--GTLDPEELAVRTERKLFEVHRGTSEKYRAA 130
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS +FN+RD+KN LR+ VL+G VTPE+ M+ +EMASDE + Q E ++A+ E Q
Sbjct: 131 LRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVMTADEMASDEMKAQREKFTKQAIEEYQM 190
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ +D FKC +CG++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 191 AVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADEPMTTFVFCRECGNRWKFC 241
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 173/348 (49%), Gaps = 33/348 (9%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIV-IEETTR 92
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++ TT+
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTK 86
Query: 93 NKKNGSTGDKSSVTTGV--VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSET 150
++ K G KP++G +K K + SRS T
Sbjct: 87 GEREEREKAKKEKGLGCSDWKPEAGLSPPRKKGGG----------EPKTRRDSVDSRSST 136
Query: 151 VQVEKKETNGDSVMDRGEAVK--VEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSS 208
K+ + ++R + K VE + P+ +A LT DS
Sbjct: 137 TSSPKRPS-----LERSNSSKSKVETPTTPSSPSTPTFAPAVCLLAPCYLT-----GDSV 186
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
RDK E+L+ AL +A++ D CD ++A +E ++++L + + + RS
Sbjct: 187 RDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRS 239
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N++D +NP LR+ VL G ++PE + M+ EEMASDE + + ++A+ E Q
Sbjct: 240 RISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 299
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD +CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 300 GGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 347
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRV 243
PS I P + +DS R K RE+L+ AL + ADEE +
Sbjct: 125 PSNSFI--PSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEE-----------EL 171
Query: 244 AVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEM 303
+E +F++L + K + RS + N++D KNP+LRK VL G + P++ M+ EEM
Sbjct: 172 GSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEM 231
Query: 304 ASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTY 363
ASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+
Sbjct: 232 ASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
Query: 364 VTCVNCSKRWKFC 376
V C C RWKFC
Sbjct: 292 VVCNECGNRWKFC 304
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R+K RE+L AL
Sbjct: 65 RGMPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL 123
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
+ D + + C+ R++ +E +F +G + K + RS + N++D KNPD
Sbjct: 124 -----QTDHDHVAIGADCE--RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPD 176
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 177 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 236
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 237 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 272
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 1 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 60
Query: 94 KKNG 97
++ G
Sbjct: 61 RERG 64
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 98/170 (57%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D +RDK EL+ +AL S A E+I + A +E + G + K K
Sbjct: 139 DKTRDKCAELIYDALV-FDSGAPSELI--------LSRAKDIEKTVLADNGGANANYKAK 189
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP LR+ V+ GE+ +L MS +MAS+ER+ IKE+ LF+
Sbjct: 190 IRSLFVNLKDKNNPGLRECVISGELPVSKLCKMSSADMASEERKAADAKIKEENLFKTLG 249
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
GE A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC C RWKF
Sbjct: 250 AGEQEAETDAFQCPRCKQRKCRYRQQQTRSADEPMTTFVTCTVCKNRWKF 299
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 173/348 (49%), Gaps = 33/348 (9%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIV-IEETTR 92
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++ TT+
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVSGVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTK 86
Query: 93 NKKNGSTGDKSSVTTGV--VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSET 150
++ K G KP++G +K K + SRS T
Sbjct: 87 GEREEREKAKKEKGLGCSDWKPEAGLSPPRKKGGG----------EPKTRRDSVDSRSST 136
Query: 151 VQVEKKETNGDSVMDRGEAVK--VEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSS 208
K+ + ++R + K VE + P+ +A LT DS
Sbjct: 137 TSSPKRPS-----LERSNSSKSKVETPTTPSSPSTPTFAPAVCLLAPCYLT-----GDSV 186
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
RDK E+L+ AL +A++ D CD ++A +E ++++L + + + RS
Sbjct: 187 RDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRS 239
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N++D +NP LR+ VL G ++PE + M+ EEMASDE + + ++A+ E Q
Sbjct: 240 RISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 299
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD +CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 300 GGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 347
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
+D R K RE+LANAL + ++ I CD + +E +F+ + K
Sbjct: 147 SDPIRVKCREMLANAL-----QTGDDYIAIGADCD--ELGAQIEDFIFQVFKNTDMKYKN 199
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP+LR+ VL G +TPER+ M+ EEMASDE + +N+ ++A+ + Q
Sbjct: 200 RVRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDELKEIRKNLTKEAVRDHQ 259
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C + CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 260 MATTGGTQTDLFTCGKCKGKNCTYTQVQTRSADEPMTTFVFCSGCGNRWKFC 311
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 166/360 (46%), Gaps = 35/360 (9%)
Query: 24 VSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPRE-KIQIVASNLLDIW 82
SS G + +D LK L++ + ++L T++G + L K ++ ++ +A L+ W
Sbjct: 19 TSSDGAGQEQALDLLKALQTLNINLEILTKTRIGMTVNELRKSSKDDEVIALAKTLIKNW 78
Query: 83 KKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKT 142
K+ + T +S T K G +K +A K S+A K+
Sbjct: 79 KRFLASPAPPAAAGNQTPKESGGT--AAKESGGASNKESGGAASNNNKSSSAG-----KS 131
Query: 143 GSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRK----PSQGTIATPKL 198
S++ E + + +V D+ E K + + PS G
Sbjct: 132 NSLANKE--KSSSGSNSSSTVKDKREEKKSSSSSSSTSSSSASSAQTTFPSGGGGGMK-- 187
Query: 199 TQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV-NAC-DPIRVAVSVESVMFEKLG 256
D+ R K RE+LA AL + EV + C +P +A +E ++ +
Sbjct: 188 -------DAVRLKCREMLATALK----------MGEVPDGCAEPEEMAAELEDAIYMEFK 230
Query: 257 RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIK 316
+ K + RS + N++D KNP LR + G V+ ++L M+PEEMASDE ++ E
Sbjct: 231 NTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFV 290
Query: 317 EKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
++A+ + Q TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 291 KEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 350
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 113/198 (57%), Gaps = 11/198 (5%)
Query: 183 PSVRKPSQGTI-ATPKLTQLIKCN---DSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
PS +K Q + TP++T + + D+ R K E+L AL K D + + C
Sbjct: 108 PSPKKSEQPRMPTTPRITAFLPGSVTCDAIRSKCCEMLTAALQK-----DLDYVALGADC 162
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ + + +E +F +G + G K + RS +FN+RD KNPDLR++VL G +TP+++ M
Sbjct: 163 ESL--SAQIEESIFRDIGNTDGKYKNRVRSRIFNLRDAKNPDLRRKVLRGVITPQQIAVM 220
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ EEMASDE + + + +A+ + Q+ TD C +C + CTY Q QTRS+DE
Sbjct: 221 TAEEMASDEMKEIRKAMTREAIRKHQKARTGGTQTDLITCGKCSGKSCTYTQAQTRSSDE 280
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTT+V C C RWKFC
Sbjct: 281 PMTTFVLCNECGNRWKFC 298
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 17/193 (8%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRV 243
PS I P + +DS R K RE+L+ AL + ADEE + +
Sbjct: 125 PSNSFI--PSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEELGSL-------- 174
Query: 244 AVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEM 303
+E +F++L + K + RS + N++D KNP+LRK VL G + P++ M+ EEM
Sbjct: 175 ---IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEM 231
Query: 304 ASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTY 363
ASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+
Sbjct: 232 ASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
Query: 364 VTCVNCSKRWKFC 376
V C C RWKFC
Sbjct: 292 VVCNECGNRWKFC 304
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 12/172 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPI-RVAVSVESVMFEKLGRSTGAE-K 263
D +RDK EL+ ++L ++D D I + A ++ES + E TG E K
Sbjct: 134 DKTRDKCIELIYDSL----------VLDSAAPSDLILKRATAIESTVLEDHNNDTGKEYK 183
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
K RS+ N++D+ NP LR ++ GE+ + MS +EMAS+ER+ + I+E+ ++
Sbjct: 184 GKIRSLFLNLKDKNNPGLRANIVSGELEVAKFCRMSSQEMASEERKAADKAIQEENFYKS 243
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C +C QRK Y Q QTRSADEPMTT+VTCVNC+ RWKF
Sbjct: 244 LGAEEQQAETDAFQCGKCKQRKTRYRQAQTRSADEPMTTFVTCVNCNHRWKF 295
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 107/194 (55%), Gaps = 19/194 (9%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEI-----IDEVNACDPIR 242
PS G I + + +DS R K RELLA AL D+ I +DE+ A
Sbjct: 124 PSDGFITS--FPKAPITSDSVRIKCRELLAAALKT----GDDHIAIGANVDELGA----- 172
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+E +F++ + K + RS + N++D KNP+LR+ VL G + P+ M+ EE
Sbjct: 173 ---QIEDAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDFFARMTAEE 229
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
MASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT
Sbjct: 230 MASDELKEMRKNLTKEAIREHQMAKTGGTETDLFSCGKCKKKNCTYTQVQTRSADEPMTT 289
Query: 363 YVTCVNCSKRWKFC 376
+V C C RWKFC
Sbjct: 290 FVFCNECGNRWKFC 303
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+ VA +ES +F+ + + K R+ N+R++KNP+LR+R+L G + P + MS
Sbjct: 158 LSVAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELRERLLSGGIKPAEFIKMS 217
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA + +++IE + +K LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 218 PNEMAPEALKKEIEKLHKKNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 277
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 278 LTTFCTCENCGNRWKF 293
>gi|358058917|dbj|GAA95315.1| hypothetical protein E5Q_01972 [Mixia osmundae IAM 14324]
Length = 330
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 166/347 (47%), Gaps = 52/347 (14%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNK 94
+D L RL+S+ + D L T++G L L K P E I+ + ++ WK V
Sbjct: 29 LDILSRLRSWSPSADSLRQTKLGISLTGLKKSPHESIKQESMQIVRTWKDAV------KP 82
Query: 95 KNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVE 154
K GS ++ +S + KT + A TVK E + S +V V
Sbjct: 83 KGGSAAKTATPAAASTPGESAASPEAAKTG-------TPAATVKEEAAPAKSARTSVPVS 135
Query: 155 ---KKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDK 211
KK V+ ++K + I +L + ++ RD
Sbjct: 136 TVRKKSETPMKVLTGPRSLKTDGI------------------------ELPELDERQRDN 171
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKL-GRSTGAEKLKYRSIM 270
+ +L +AL+ ++ + I V + VE +++ G ++G + K RS++
Sbjct: 172 VVKLFYDALASDSAAPADMIATRV---------MDVEEAVYKFYEGDTSGDYRQKTRSLL 222
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEAT 330
N +D+KNP LR+ V+ GE++ +L +M + +S+ER+ + + E+ +F Q A
Sbjct: 223 LNFKDKKNPALREAVVSGELSASKLASMKASDFSSEERKAEDRKLAEQNMFAAQSAAPAA 282
Query: 331 AT--TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
TD FKC +CG+R+CTYYQMQTRSADEPMTT+V C+ C+ RWKF
Sbjct: 283 GQAKTDAFKCGKCGKRECTYYQMQTRSADEPMTTFVCCIVCNNRWKF 329
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 116/203 (57%), Gaps = 13/203 (6%)
Query: 179 EKQAPSVRKPSQGTI-ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIID 233
E Q PS ++P + +TP++T + C D+ R K RE+L AL ++ D I
Sbjct: 106 EAQDPSRKRPELPRMPSTPRITTFPPVPVTC-DAVRTKCREMLTAALQ---TDHDHVAIG 161
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
C +A +E +F +G + K + RS + N++D KNP LR++VL G +TP+
Sbjct: 162 ADCEC----LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQ 217
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
++ M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+QT
Sbjct: 218 QIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQT 277
Query: 354 RSADEPMTTYVTCVNCSKRWKFC 376
RS+DEPMTT+V C C RWKFC
Sbjct: 278 RSSDEPMTTFVVCNECGNRWKFC 300
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 28 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 80
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 176/350 (50%), Gaps = 37/350 (10%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 27 LDLLKKLDSCQMSIRLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPK 86
Query: 94 KKNGSTGDKSSVTTGV----VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSE 149
+ DK+ G+ KP++G +K E K + S+S
Sbjct: 87 GEKREERDKAKKEKGLNCSDWKPEAGLSPPRKKR-----------EDPKDRRDSVDSKSS 135
Query: 150 TVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---ND 206
K+ + M+R + K + E + P+ PS T A P + L C D
Sbjct: 136 ATSSPKRPS-----MERSNSSKSK---AETPKTPT--SPSTPTFA-PSICLLAPCYLTGD 184
Query: 207 SSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
S RDK E+L+ AL +A+++ D CD ++A +E ++++L + + +
Sbjct: 185 SVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRV 237
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 238 RSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMA 297
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 298 KTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 347
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPS-QGTIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R+K RE+L AL
Sbjct: 92 RGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL 150
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
+ D I D R++ +E +F +G + K + RS + N++D KNPD
Sbjct: 151 Q---TAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPD 203
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 204 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 263
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 264 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 299
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 87
Query: 94 KKNG 97
++ G
Sbjct: 88 RERG 91
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 17/193 (8%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRV 243
PS I P + +DS R K RE+L+ AL + ADEE + +
Sbjct: 88 PSNSFI--PSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEEELGSL-------- 137
Query: 244 AVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEM 303
+E +F++L + K + RS + N++D KNP+LRK VL G + P++ M+ EEM
Sbjct: 138 ---IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEM 194
Query: 304 ASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTY 363
ASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+
Sbjct: 195 ASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 254
Query: 364 VTCVNCSKRWKFC 376
V C C RWKFC
Sbjct: 255 VVCNECGNRWKFC 267
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+R+A+ +E+ +++ + + + + + + RS N+R++KNP+LR+R+L ++ P + M+
Sbjct: 169 LRIAIEIEAEVYKSEYSKVSDSYRNRLRSFTMNLRNKKNPELRERILSKQILPAAFIKMT 228
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA + +++IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 229 PNEMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 288
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 289 LTTFCTCENCGNRWKF 304
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 13/201 (6%)
Query: 179 EKQAPSVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIID 233
E Q PS ++P T +TP++T + C D+ R+K RE+LA AL ++ D I
Sbjct: 105 EAQDPSRKRPELPRTPSTPRITTFPPVPVTC-DAVRNKCREMLAIALQ---TDHDHVAI- 159
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
D R++ +E +F +G + K + RS + N++D KNPDLR+ VL G +TP+
Sbjct: 160 ---GADCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQ 216
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
++ M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+QT
Sbjct: 217 QIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQT 276
Query: 354 RSADEPMTTYVTCVNCSKRWK 374
RS+DEPMTT+V C C RWK
Sbjct: 277 RSSDEPMTTFVVCNECGNRWK 297
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 176/348 (50%), Gaps = 36/348 (10%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETT-- 91
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++ T
Sbjct: 36 LDLLKKLNSCQMSIQLLQTTRIGVAVNRVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTK 95
Query: 92 --RNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSE 149
R +++ + + + KP++G +K K + SRS
Sbjct: 96 GEREERDKAKKKEKGLGCSDWKPEAGLSPSRKKGGG----------EPKARRDSVDSRSS 145
Query: 150 TVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---ND 206
T K+ M+R +V K+ E + PS PS T A P + L C D
Sbjct: 146 TTSSPKRPP-----MERSNSVG-SKV--ETPKTPS--SPSTPTFA-PSVCLLAPCYLTGD 194
Query: 207 SSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
S RDK E+L+ AL +A+++ D CD ++A +E ++++L + + +
Sbjct: 195 SVRDKCVEMLSAAL-----KAEDDFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRV 247
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS + N++D +NP LR+ VL G ++P + M+ EEMASDE + + ++A+ E Q
Sbjct: 248 RSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDELRELRNAMTQEAIREHQMA 307
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TTD +CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 308 KTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 355
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 173/366 (47%), Gaps = 81/366 (22%)
Query: 21 IDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLL 79
++ VS+G +D LK LK+ P+T ++L ST++G + + K E++ +A +L+
Sbjct: 19 VEQVSAGA------LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLI 72
Query: 80 DIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKV 139
WKK++ +G + DK S ++ +K +AV + A
Sbjct: 73 KSWKKLL---------DGPSTDKDS-------------EEKKKDTAVTSQNSPEAREESS 110
Query: 140 EKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLT 199
+ SR K ETN + + +APS
Sbjct: 111 SSGNTSSR-------KDETNAR-----------DTYVSSFPRAPST-------------- 138
Query: 200 QLIKCNDSSRDKIRELLANAL----SKVTSEADEE----IIDEVNACDPIRVAVSVESV- 250
+DS R K RE+LA AL + ADEE I+E C V + +V
Sbjct: 139 -----SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDILC------VYIHNVP 187
Query: 251 MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR 310
+++++ + K + +S + N++D KNP+LRK VL G + P+ M+ EEMASDE +
Sbjct: 188 IYQEIRNTDMKYKNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKE 247
Query: 311 QIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCS 370
+N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C
Sbjct: 248 MRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECG 307
Query: 371 KRWKFC 376
RWKFC
Sbjct: 308 NRWKFC 313
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 176 IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV 235
++EEK +++ Q T P T D+ R K RELL AL D ++ID
Sbjct: 125 VKEEKPNKDIQR-KQATFPAPTTT------DAVRLKCRELLIAAL-----RVDGKVID-- 170
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
+ P +A +E ++ + + K + RS + N+RD KNP+LR L+G +TP RL
Sbjct: 171 SCASPEELAEELEEAIYGEFKNTDNRYKNRVRSRIANLRDAKNPNLRMNFLVGAITPARL 230
Query: 296 VTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRS 355
M+ EEMASDE ++ E K++A+ + Q TD KC +C +R CTY Q+QTRS
Sbjct: 231 AVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRS 290
Query: 356 ADEPMTTYVTCVNCSKRWKFC 376
ADEPMTT+V C C RWKFC
Sbjct: 291 ADEPMTTFVLCNECGNRWKFC 311
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
I +A +ES +F+ + + + + K RS N+R++KNP+LR+RVL ++T + + M+
Sbjct: 164 ITIASEIESEVFKSEYSKVNDSYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA + +++IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 224 PNEMAPEALKKEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 283
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 284 LTTFCTCENCGNRWKF 299
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 14/201 (6%)
Query: 176 IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV 235
++EEK +++ Q + P T D+ R K RELLA AL D ++ID
Sbjct: 102 VKEEKPFKDIQR-KQSSFPAPITT------DAVRLKCRELLAAAL-----HVDGKVID-- 147
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
P +A +E ++ + + K + RS + N+RD KNP+LR L+G +TP RL
Sbjct: 148 GCASPEELAEELEEAIYAEFKNTDSRYKNRVRSRVANLRDVKNPNLRTNFLVGAITPARL 207
Query: 296 VTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRS 355
M+ EEMASDE ++ E K++A+ + Q TD KC +C +R CTY Q+QTRS
Sbjct: 208 AVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRS 267
Query: 356 ADEPMTTYVTCVNCSKRWKFC 376
ADEPMTT+V C C RWKFC
Sbjct: 268 ADEPMTTFVLCNECGNRWKFC 288
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 13/216 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPS-QGTIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R+K RE+L AL
Sbjct: 92 RGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL 150
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
+ D I D R++ +E +F +G + K + RS + N++D +NPD
Sbjct: 151 Q---TAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPD 203
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 204 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 263
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 264 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 299
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 87
Query: 94 KKNG 97
++ G
Sbjct: 88 RERG 91
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 13/198 (6%)
Query: 184 SVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
S +KP T +TP++T I C D+ R+K RE+L AL + D + + +C
Sbjct: 110 SCKKPDPPRTSSTPRITTFPQVPITC-DAVRNKCREMLTLAL-----QTDHDHVAVGVSC 163
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ ++ +E +F +G + K + RS + N++D KNP LR+ VL G +TP+++ M
Sbjct: 164 E--HLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 221
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ EEMASDE + + + ++A+ E Q TD F C++C ++ CTY Q+QTRS+DE
Sbjct: 222 TSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDE 281
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTTYV C C RWKFC
Sbjct: 282 PMTTYVVCNECGNRWKFC 299
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLL 79
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS R K RELL AL ++ D + I D +A +E ++++ + K +
Sbjct: 137 DSVRTKCRELLVAALQ---TDGDHQTI----GADCEHMAAQIEDYIYQEFKSTDMKYKTR 189
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D+KNPDLR+ VL G ++PER+ +M+ EEMAS E + + + ++++ E Q
Sbjct: 190 LRSRISNLKDQKNPDLRRNVLCGNISPERIASMTAEEMASPELKEIRKALTKESIREHQL 249
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C + CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 250 SKVGGTETDMFVCGKCKGKNCTYTQVQTRSADEPMTTFVLCNECGNRWKFC 300
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 163/347 (46%), Gaps = 75/347 (21%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 25 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 77
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 78 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 115
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS + K R
Sbjct: 116 RKDETNAR-----------DTYVSSFPRAPST-------------------SDSVQLKCR 145
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 146 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 194
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 195 ISNLKDAKNPYLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKEAIREHQMAKTG 254
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEP+TT+V C C RWKFC
Sbjct: 255 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRWKFC 301
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 115/203 (56%), Gaps = 13/203 (6%)
Query: 179 EKQAPSVRKPSQGTI-ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIID 233
E Q PS ++P + +TP++T + C D+ R K RE+L AL ++ D I
Sbjct: 142 EAQDPSRKRPELPRMPSTPRITTFPPVPVTC-DAVRTKCREMLTAALQ---TDHDHVAIG 197
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
C +A +E +F +G + K + RS + N++D KNP LR+ VL G +TP+
Sbjct: 198 ADCEC----LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRNVLCGAITPQ 253
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
++ M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+QT
Sbjct: 254 QIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQT 313
Query: 354 RSADEPMTTYVTCVNCSKRWKFC 376
RS+DEPMTT+V C C RWKFC
Sbjct: 314 RSSDEPMTTFVVCNECGNRWKFC 336
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 64 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 116
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 157/345 (45%), Gaps = 62/345 (17%)
Query: 38 LKRLKSFPVTYDVLVSTQVG---KRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNK 94
LKRL++ +T ++L T VG ++R ++ P ++ + N++ WKK+V
Sbjct: 29 LKRLRNIEMTLEILTKTGVGIIINKIRKESEDP--EVATLGKNMIKQWKKLV-------- 78
Query: 95 KNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAET-VKVEKTGSVSRSETVQV 153
DKS V P + + ++ T V + +G +
Sbjct: 79 -----PDKSDVPA----PCTNTVGSTNNGGNGNIKHSPELSTYVGSDDSGPQDAKRSRPS 129
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
EKKE S G A S+G LT ND R K R
Sbjct: 130 EKKEPTEPS----GNA-------------------SRGFFPVHTLT----TNDQVRLKAR 162
Query: 214 ELLANAL--SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMF 271
E+L +AL + S A E +A+ +ES +++ + K + R+ +
Sbjct: 163 EMLQSALESGNIPSGAYESEF----------LAIRIESSIYDLFNNTDPKYKQRVRTRVM 212
Query: 272 NIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATA 331
N+RD NP+LR VL+G V+P++L +M+ EEMAS E + E ++ + + Q
Sbjct: 213 NLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELREKYTKETIEDHQMAVTGGT 272
Query: 332 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD +C +C Q KCTY Q+QTRSADEPMTT+V C NC RWKFC
Sbjct: 273 ETDLLRCGKCKQTKCTYNQVQTRSADEPMTTFVYCNNCGHRWKFC 317
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 111/199 (55%), Gaps = 12/199 (6%)
Query: 183 PSVRKPSQGTIATP----KLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
PSV + + G+ P T ++CN D++R +L+ + D +I +
Sbjct: 123 PSVPRKTGGSSVDPMKRSHKTDGVECNIFGGDEVR---TKSLAMIY---DGLVIGALATP 176
Query: 239 DPI-RVAVSVESVMFEKLGRSTG-AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLV 296
D + ++A E ++ G T A + K RS+ FN++D KNP LR V+ G + P RL
Sbjct: 177 DDVFKLAKDTEHNLYRNHGSKTDTAYRNKLRSLFFNLKDPKNPSLRNNVISGRIEPMRLA 236
Query: 297 TMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSA 356
MS EEMAS ER+R+ E I+++ + E T+ TDQ +C +CG+R +Y Q QTRSA
Sbjct: 237 LMSSEEMASAERKREDEKIEQENMKEAMVAKAPTSVTDQLRCGKCGKRNVSYSQAQTRSA 296
Query: 357 DEPMTTYVTCVNCSKRWKF 375
DEPMTT+ C+ C RWKF
Sbjct: 297 DEPMTTFCECLQCGNRWKF 315
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 176/354 (49%), Gaps = 47/354 (13%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIV------- 86
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGLPK 86
Query: 87 ---IEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTG 143
EE + KKN D S KP++G + + E K +
Sbjct: 87 GEKGEEREKAKKNEKGHDCSDW-----KPETG----------LSPPRKKRGEEPKDRRDS 131
Query: 144 SVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIK 203
+ S+S K+ + M+R + K + E + PS P T A P + L
Sbjct: 132 TDSKSSATSSPKRPS-----MERSNSSKSK---AEAPKTPS--SPLTPTFA-PSMCLLAP 180
Query: 204 C---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
C DS RDK E+L+ AL +AD++ D CD ++A +E ++++L +
Sbjct: 181 CYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDM 233
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
+ + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+
Sbjct: 234 KYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELKELRNAMTQEAI 293
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 294 REHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 347
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 170/378 (44%), Gaps = 70/378 (18%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
EQE++ + A +K V P + +D LK L+ P+T D+L + VG +
Sbjct: 4 EQEIIRIGKALEKI--------VGEDNPNTEKALDLLKSLQEMPMTLDLLQKSHVGLSVN 55
Query: 62 PLTKHPRE-KIQIVASNLLDIWKKIVIEETTRNKKNGSTG--DKSSVTTGVVKPDSGKID 118
L K + ++ V L+ WKK++ ++ ++ + D+SS V P
Sbjct: 56 TLRKKCSDSEVSGVGKKLIKQWKKLLSADSPKSSTSERRRSSDQSSPPPVVYNP------ 109
Query: 119 KVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEE 178
Q +SA ST T S T+ V
Sbjct: 110 --QNSSAQPTSNGSTTPT-----------SSTMPV------------------------- 131
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
P G+ P + ++ ++ RD + + + L++V E D + +
Sbjct: 132 ----PEFSLSIDGSSRVPPTSNAVR--NTCRDMVYKAMKKGLNEVNIEDDTRLYN----- 180
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
++ ++E +F + + K + RS + NI D KNP L+++++ GE++P R+ M
Sbjct: 181 ----LSAAIEDQIFSEFKDTNMKYKNRVRSRVSNIGDLKNPGLKQKIISGEISPARIAKM 236
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
S EEMAS++ ++ + ++A+ + Q +D KC +CG+R C+Y QMQTRSADE
Sbjct: 237 STEEMASEDMKKLRQEYTKEAIRDSQMAVTQGTKSDLLKCGKCGKRNCSYNQMQTRSADE 296
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTT+V C C RWKFC
Sbjct: 297 PMTTFVLCNECGHRWKFC 314
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R K RE+L+NAL + + A DP +A +ES F++ + + +
Sbjct: 125 DAVRLKCREMLSNALKG-------NGLPDGCAADPDELAERIESTCFDEFNNTDTKYRSR 177
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP+LR VL+G + PERL M+ EEMASDE ++ + + ++A+ + Q
Sbjct: 178 IRSRVANLKDPKNPNLRLGVLIGSIKPERLAKMTAEEMASDELKQLRQKLTKEAIDDHQM 237
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ TD KC +C + CTY Q+QTRSADEPMTT+ C C RWKFC
Sbjct: 238 ALTSGTKTDLLKCGKCKKSNCTYNQVQTRSADEPMTTFAFCNECGNRWKFC 288
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A+ E +FE ++ + RS +FN+RD+KN LR+ VL+G VTPE+ M
Sbjct: 17 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 76
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ +EMASDE + Q E ++A+ E Q + +D FKC +CG++ CTY Q+QTRSADE
Sbjct: 77 TADEMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFKCGKCGKKNCTYTQVQTRSADE 136
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTT+V C C RWKFC
Sbjct: 137 PMTTFVFCRECGNRWKFC 154
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 107/188 (56%), Gaps = 10/188 (5%)
Query: 192 TIATPKLTQ---LIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVE 248
T TPK+T+ L +DS R K RE+L AL ++ D I D +A +E
Sbjct: 112 TPITPKMTRFPPLPVTSDSVRTKCREMLRAALQ---TDGDHVAI----GADCEFLAAQIE 164
Query: 249 SVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDER 308
V+F ++ + K + RS + N++D KNPDLRK VL G + PE++ MS EEMAS+E
Sbjct: 165 EVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNEL 224
Query: 309 QRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVN 368
+ + + + A+ E Q TD F C +C ++ CTY Q+Q RSADEPMTT+V C
Sbjct: 225 KEMRKAMTKAAIQEHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTTFVACNE 284
Query: 369 CSKRWKFC 376
C RWKFC
Sbjct: 285 CGNRWKFC 292
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R+K RE+L AL +AD++ I C+ I A +E +++ + + K +
Sbjct: 137 DAVRNKCREMLTTAL-----QADDDYIAIGADCEHI--AAQIEECIYQDIKNTDMKYKNR 189
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP+L+K VL G +TPE++ M+ EEMAS+E + + + ++A+ E Q
Sbjct: 190 VRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQM 249
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 250 AKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 300
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 16/76 (21%)
Query: 12 AKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EK 70
AKK+AD A +D LK LKS P+T D+L ST++G + L K E+
Sbjct: 19 AKKSADGA---------------MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSSDEE 63
Query: 71 IQIVASNLLDIWKKIV 86
+ +A +L+ WKK++
Sbjct: 64 VIALAKSLIKSWKKLL 79
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+++A +ES +F+ + R + K RS N+R++KNP+LR+R+L ++T + M+
Sbjct: 176 LKIATEIESEVFKSQYSRVDDTYRNKLRSFTMNLRNKKNPELRERILTKQITAAAFIKMT 235
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P+EMA + + +IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 236 PKEMAPEALKLEIEKLHKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 295
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 296 LTTFCTCENCGNRWKF 311
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R K RELLA+AL + + ID P +A +E +F + + + +
Sbjct: 149 DAVRLKCRELLASAL-----QVEGNTID--GCASPEELAEELEEAIFGEFKNTDNKYRNR 201
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N+RD KNP LR ++G +TP RL TM+ EEMASDE ++ E K++A+ + Q
Sbjct: 202 VRSRVANLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEIKQLREQFKKEAINDAQL 261
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 262 ATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 312
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 107/175 (61%), Gaps = 8/175 (4%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
I C D+ R+K RE+L +AL +AD++ I C+ I A +E +++ + +
Sbjct: 108 ITC-DAVRNKCREMLTSAL-----QADDDYIAIGADCEHI--AAQIEECIYQDIKNTDMK 159
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+L+K VL G +TPE++ M+ EEMAS+E + + + ++A+
Sbjct: 160 YKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 219
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 220 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 274
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D LK LKS P+T D+L ST++G + L K E++ +A +L+ WKK++
Sbjct: 1 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVIALAKSLIKSWKKLL 53
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 115/198 (58%), Gaps = 13/198 (6%)
Query: 184 SVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
S +KP T +TP++T I C D+ R+K RE+L AL + D + + C
Sbjct: 84 SCKKPDPPRTPSTPRITTFPQVPITC-DAVRNKCREMLTLAL-----QTDHDHVAVGVNC 137
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ ++ +E +F +G + K + RS + N++D KNP LR+ VL G +TP+++ M
Sbjct: 138 E--HLSSQIEECIFLDVGNADMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 195
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ EEMASDE + + + ++A+ E Q TD F C++C ++ CTY Q+QTRS+DE
Sbjct: 196 TSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDE 255
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTTYV C C RWKFC
Sbjct: 256 PMTTYVVCNECGNRWKFC 273
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKI--VIEETT 91
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK+ V + +
Sbjct: 1 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKS 60
Query: 92 RNKKNGSTGDKSS 104
RN+ G+ SS
Sbjct: 61 RNQGRGTPLPTSS 73
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 115/198 (58%), Gaps = 13/198 (6%)
Query: 184 SVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
S +KP T +TP++T I C D+ R+K RE+L AL + D + + C
Sbjct: 110 SCKKPDPPRTPSTPRITTFPQVPITC-DAVRNKCREMLTLAL-----QTDHDHVAVGVNC 163
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ ++ +E +F +G + K + RS + N++D KNP LR+ VL G +TP+++ M
Sbjct: 164 E--HLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 221
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ EEMASDE + + + ++A+ E Q TD F C++C ++ CTY Q+QTRS+DE
Sbjct: 222 TSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDE 281
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTTYV C C RWKFC
Sbjct: 282 PMTTYVVCNECGNRWKFC 299
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKI--VIEETT 91
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK+ V + +
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKS 86
Query: 92 RNKKNGSTGDKSS 104
RN+ G+ SS
Sbjct: 87 RNQGRGTPLPTSS 99
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 153/345 (44%), Gaps = 78/345 (22%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKH-PREKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK P+ D L T++G + + K +++ I A L+ WKK+V E ++ +
Sbjct: 29 LDVLKALKQIPINLDTLQKTRIGMSVNNIRKQTANDEVAIAAKQLIKGWKKLVSEPSSAS 88
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
KK+ K KP+ ++KTS K+E VS + S T+
Sbjct: 89 KKSEDNKKKE-------KPEPIISTNIRKTSTTKME-VSAS-------------SHTMDT 127
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
++ G+SV RDK R
Sbjct: 128 SSLQSTGNSV---------------------------------------------RDKCR 142
Query: 214 ELLANALS--KVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMF 271
E+L L + +D++ +A ++E ++ + + K + RS
Sbjct: 143 EMLVRGLQTDNTSGHSDQQCA---------FLAAAIEEAIYSEFKDTGVKYKNRIRSRFS 193
Query: 272 NIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATA 331
N++D +N LR VL G + PE++ M+ EEMASDE +++ E +++ + + Q
Sbjct: 194 NLKDTRNSILRLNVLNGILKPEQIAKMTAEEMASDEMKKKREEYEQQNIKDHQMSVNEGT 253
Query: 332 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C RC R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 254 KTDMFVCGRCKGRACTYNQLQTRSADEPMTTFVFCTECGNRWKFC 298
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 195 TPKLTQ---LIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM 251
TPK+T+ L +DS R K RE+L AL ++ D I D +A +E V+
Sbjct: 115 TPKMTRFPPLPVTSDSVRTKCREMLRAALQ---TDGDHVAI----GADCEFLAAQIEEVV 167
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
F ++ + K + RS + N++D KNPDLRK VL G + PE++ MS EEMAS+E +
Sbjct: 168 FGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNELKEM 227
Query: 312 IENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
+ + + A+ E Q TD F C +C ++ CTY Q+Q RSADEPMTT+V C C
Sbjct: 228 RKAMTKAAIQEHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTTFVACNECGN 287
Query: 372 RWKFC 376
RWKFC
Sbjct: 288 RWKFC 292
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 177/354 (50%), Gaps = 44/354 (12%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 27 LDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL------- 79
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
S G P G+ K ++ + K + + ++ K E S R +
Sbjct: 80 ---DSPG-----------PPKGEKGKEREKAKKKEKGLDCSD-WKPEAGLSPPRKKR--- 121
Query: 154 EKKETNGDSVMDRGEAVK------VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC- 204
E +T DSV + A VE+ + +A S R PS T + L C
Sbjct: 122 EDPKTRRDSVDSKSSATSSPKRPSVERSNSSKSKAESPRTPSSPLTPTFASSICLLAPCY 181
Query: 205 --NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
DS RDK E+L+ AL +AD++ D CD ++A +E ++++L +
Sbjct: 182 LTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKY 234
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E
Sbjct: 235 RNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIRE 294
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 295 HQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 348
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
PS I+T + +DS R K RE+L+ AL +A ++ I CD + +
Sbjct: 2 PSNSLIST--FPRAPSTSDSVRMKCREMLSQAL-----QAGDDYIAIGADCD--ELGAQI 52
Query: 248 ESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
E +F + + K + RS + N++D KNP+LR+ VL G V P+R+ M+ EEMASDE
Sbjct: 53 EESIFSEFQNTDPKYKNRVRSRIANLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDE 112
Query: 308 RQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCV 367
+ +N+ ++A+ + Q TD F C +C +++CTY Q+QTRSADEPMTT+V C+
Sbjct: 113 LKLIRKNLTKEAIRDHQVSQTGGTQTDLFTCGKCKKKRCTYTQVQTRSADEPMTTFVFCM 172
Query: 368 NCSKRWKFC 376
C RWKFC
Sbjct: 173 ECGNRWKFC 181
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Query: 241 IRVAVSVESVMFE-KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+++A +ES +F+ + + T + + K RS N+R++KNP+LR+R+L + + M+
Sbjct: 160 LKIASEIESEVFKSEYSKVTDSYRNKLRSFTMNLRNKKNPELRERLLTQAILAANFIKMT 219
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
P EMA + +++IE + ++ LF+ Q E A TD+F C +C +K +YYQMQTRSADEP
Sbjct: 220 PSEMAPESLKKEIEKLNKQNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEP 279
Query: 360 MTTYVTCVNCSKRWKF 375
+TT+ TC NC RWKF
Sbjct: 280 LTTFCTCENCGNRWKF 295
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 76/111 (68%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K R+ N+R++KNPDLR R+L ++ P + M+P EMA + +++IE + ++ LF+ Q
Sbjct: 179 KLRTFTMNLRNKKNPDLRDRLLTNKIKPSNFIKMTPNEMAPESLKKEIEKLHKQNLFDAQ 238
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD+F C +C +K +YYQMQTRSADEP+TT+ TC NC RWKF
Sbjct: 239 GATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWKF 289
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 18/207 (8%)
Query: 180 KQAPSVRKPSQG------TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADE 229
K+AP + PS+ + P++T + C D+ R+K RE+L AL + D
Sbjct: 394 KEAPEAKDPSRKRPELPRVPSAPRITTFPPVPVTC-DAVRNKCREMLTAAL-----QTDH 447
Query: 230 EIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+ + C+ + + +E +F +G + K + RS + N++D KNPDLR+ VL G
Sbjct: 448 DHMAVGADCEGL--SAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGV 505
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYY 349
+TP+++ M+ EEMASDE + + + ++A+ E Q TD F C RC ++ CTY
Sbjct: 506 ITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGRCRRKNCTYT 565
Query: 350 QMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 566 QVQTRSSDEPMTTFVVCNECGNRWKFC 592
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 320 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 372
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
+DS R+K RELL AL ++ D + I D +A +E +F++ + K
Sbjct: 145 SDSVRNKCRELLVAALQ---TDDDYKTI----GVDCDHLAAQIEHQIFQEFKSTDMKYKA 197
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D+KNPDLR+ VL G ++ +R+ M+ EEMAS E ++ E + ++++ E Q
Sbjct: 198 RLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAELKQIREALTKESIREHQ 257
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F CS+C + CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 258 LSKVGGTETDMFICSKCHGKNCTYTQVQTRSADEPMTTFVLCNGCGNRWKFC 309
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 193 IATPKLTQLIKCNDSSRDKIRELLANALSKVTSE-ADEEIIDEVNACDPIRVAVSVESVM 251
+ P + + K DS RDK+RE+L +L KV SE D E+ V ACDP VAVSVES M
Sbjct: 591 VKIPTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAM 650
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
FEKLG G K KYRSI+FN+ D NPDLR++VL+GE+ ERLVTM +EM S++ Q++
Sbjct: 651 FEKLGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKE 710
Query: 312 IENIKEKALFE 322
++ IKE A F+
Sbjct: 711 VQRIKENARFK 721
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTY--DVLVSTQVGKR 59
+QE +EL++AA +AA S + GV + +VSR VDA RLK P + +V+ T +GK
Sbjct: 493 KQEFLELYEAALRAAKS--VKGVKNSS-KVSRFVDARNRLKDAPTSLACEVVSKTSMGKG 549
Query: 60 LRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDK 119
L L H I+ L D+W KI+ + T K + + K K DK
Sbjct: 550 LSFLNDHKNPHIRSEGRLLRDLWMKILYASGREKSHDRETQVKIPTHSTMKKTGDSKRDK 609
Query: 120 VQ---KTSAVKV 128
V+ +TS VKV
Sbjct: 610 VREILQTSLVKV 621
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
I C D+ R+K RE+L AL +AD++ I C+ I A +E +++ + +
Sbjct: 134 ITC-DAVRNKCREMLTAAL-----QADDDYIAIGADCEHI--AAQIEECIYQDVKNTDMK 185
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+L+K VL G +TPE++ M+ EEMAS+E + + + ++A+
Sbjct: 186 YKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 245
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 246 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKFC 300
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LKS P+T D+L ST++G + L K E++ +A +L+ WKK++ +N
Sbjct: 27 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLDASEEKN 86
Query: 94 ---KKNGSTGDKSSVTTG 108
KK+ S SS TG
Sbjct: 87 EDKKKSLSLPTSSSRETG 104
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 11/205 (5%)
Query: 177 EEEKQAPSVRKPSQG-----TIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEI 231
EE K++P ++ S + + P+ T I D R + RE+L NAL + S+ + I
Sbjct: 93 EESKKSPHSKEESNAKSNGLSKSFPQKTN-IATTDDVRLRCREMLTNALKGIGSDLPDGI 151
Query: 232 IDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVT 291
P +A +E +F ++ K + RS +FN++D+KNP LR+ VL G +
Sbjct: 152 CKS-----PEELADLIEEAIFSNFKSTSAKYKNQIRSRVFNLKDKKNPALRENVLTGIIE 206
Query: 292 PERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQM 351
P + M+ +EMAS+E ++Q + ++ + Q TD KC +C +R CTY Q+
Sbjct: 207 PSKFAVMTADEMASNEVKKQRADFVKQGIDASQLAQIQGTKTDLLKCGKCLKRNCTYNQI 266
Query: 352 QTRSADEPMTTYVTCVNCSKRWKFC 376
QTRSADEPMTT+V C C RWKFC
Sbjct: 267 QTRSADEPMTTFVLCNECGNRWKFC 291
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 21 IDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLL 79
++ + SG + S+ +D LK L + +L ST+VG + L K +E+ + VA +L+
Sbjct: 14 LEKIVSGSRDGSQALDLLKVLGRLKINLTILTSTRVGMTVNNLRKTSKEEEVVTVAKSLI 73
Query: 80 DIWKKIVIEETTRNKKNGSTGDKSS 104
WKK V E + + KK+ K S
Sbjct: 74 KTWKKFVPENSDKKKKDSEEESKKS 98
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 97/170 (57%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D +RDK EL+ +AL + E+++ A +E +F + A K K
Sbjct: 145 DKTRDKCAELIYDALVFDSGAPSEQVMTR---------AKDIEKTVFNDNSGANAAYKAK 195
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP LR+ V+ G++ + MS ++MAS+ER+ I ++ LF+
Sbjct: 196 IRSLFVNLKDKNNPGLRESVVSGDLAIAKFCRMSSQDMASEERKAADAKIAQENLFKTLG 255
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC C+ RWKF
Sbjct: 256 AEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRWKF 305
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 170/354 (48%), Gaps = 43/354 (12%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S+ ++ +L +T++G + + KH K + +A L+ WK+++ T
Sbjct: 27 LDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLLDSPATPK 86
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+ G ++ A K EK K E + S R + +V
Sbjct: 87 GEKGE----------------------ERVKAKKKEKGLDCSDWKPETSLSPPRKK--RV 122
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKP--------SQGTIATPKLTQLIKC- 204
E+ + DSV + A K E+ S K P + L C
Sbjct: 123 EEPKDRRDSVDSKSSATSSPKRPSMERSNSSKSKAETPRTPSSPSSPTFAPSVCLLAPCY 182
Query: 205 --NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
DS RDK E+L+ AL +AD++ D CD ++A +E ++++L +
Sbjct: 183 LTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKY 235
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E
Sbjct: 236 RNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIRE 295
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 296 HQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 349
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 98/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RELL+ AL +T AD+E + +E +F++ +
Sbjct: 143 DSVRIKCRELLSAALKTGDDYITIGADDE-----------ELGAQIEEAVFQEFKNTDAK 191
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LR+ VL G ++P MS EEMASDE + +N+ ++A+
Sbjct: 192 YKNRVRSRIANLKDGKNPNLRRNVLCGNISPIVFAKMSAEEMASDELKEMRKNLTKEAIR 251
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C + CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 252 EHQMAKTGGTETDLFSCGKCKMKNCTYTQVQTRSADEPMTTFVFCNTCGNRWKFC 306
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 102/185 (55%), Gaps = 15/185 (8%)
Query: 196 PKLTQLIKCNDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVM 251
P + +DS R K RE+LA AL + ADEE + +E +
Sbjct: 107 PSFPRAPSTSDSVRMKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAI 155
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
+++L + K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE +
Sbjct: 156 YQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEI 215
Query: 312 IENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
+N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C
Sbjct: 216 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 275
Query: 372 RWKFC 376
RWKFC
Sbjct: 276 RWKFC 280
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 101/181 (55%), Gaps = 7/181 (3%)
Query: 196 PKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKL 255
P + +DS R K RE+LA AL D+ I D + +E ++++L
Sbjct: 118 PSFPRAPSTSDSVRVKCREMLAAALKT----GDDYI---AIGADDEELGSQIEEAIYQEL 170
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI 315
+ K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+
Sbjct: 171 RNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNL 230
Query: 316 KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKF
Sbjct: 231 TKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKF 290
Query: 376 C 376
C
Sbjct: 291 C 291
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 96/134 (71%), Gaps = 1/134 (0%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
+KC+D+ R K+R +L +L++V E + + V++ DPI VA VESVMF+K+G GA
Sbjct: 275 VKCDDALRGKVRSILVESLTRVAKETEAGLRRAVSSRDPICVAADVESVMFQKMGAFNGA 334
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
+ +KYRS++FN++D KNPDLR++VLLG++ PE+LVTM+ EEMAS+ RQ + I+ K+L
Sbjct: 335 KTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNHRQFENAQIRMKSLL 394
Query: 322 -ECQRGGEATATTD 334
E ++ G+ + D
Sbjct: 395 KEKKKAGQEYKSVD 408
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPV-TYDVLVSTQVGKR 59
MEQ+ + LF++AK +AD+A SS PEV RC+ AL +LK FPV + VL+ T V K+
Sbjct: 1 MEQQFLSLFESAKTSADAAVTS--SSMIPEVHRCLAALGQLKRFPVISSRVLLFTPVAKQ 58
Query: 60 LRPLTKHPREKIQIVASNLLDIWKK 84
+ LT+HP + I+ AS LL W++
Sbjct: 59 VECLTRHPVKMIKTAASCLLYTWRR 83
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R K RELLA AL D ++ID P +A +E ++ + + K +
Sbjct: 115 DAVRLKCRELLAAAL-----RVDGKVID--GCASPEELAEELEEAIYAEFKNTDNRYKNR 167
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N+RD KNP+LR ++G +TP RL M+ EEMASDE ++ E K++A+ + Q
Sbjct: 168 VRSRVANLRDVKNPNLRTNFIVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQL 227
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 228 ATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 278
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 10/184 (5%)
Query: 196 PKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF 252
P + L C DS RDK E+L+ AL +A++ D CD ++A +E ++
Sbjct: 113 PAVCLLAPCYLTGDSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIY 165
Query: 253 EKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQI 312
++L + + + RS + N++D +NP LR+ VL G ++PE + M+ EEMASDE +
Sbjct: 166 QELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELR 225
Query: 313 ENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKR 372
+ ++A+ E Q TTD +CS+C ++ CTY Q+QTRSADEPMTT+V C C R
Sbjct: 226 NAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNR 285
Query: 373 WKFC 376
WKFC
Sbjct: 286 WKFC 289
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 15/185 (8%)
Query: 196 PKLTQLIKCNDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVM 251
P + +DS R K RE+LA AL + ADEE + +E +
Sbjct: 107 PSFPRAPSTSDSVRMKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAI 155
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
+++L + K + RS + N++D KNP+LRK VL G + P+ ++ EEMASDE +
Sbjct: 156 YQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASDELKEM 215
Query: 312 IENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
+N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C
Sbjct: 216 RKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 275
Query: 372 RWKFC 376
RWKFC
Sbjct: 276 RWKFC 280
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 137 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 185
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 186 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 245
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 246 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 300
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 100/176 (56%), Gaps = 16/176 (9%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRV---AVSVESVMFEKLGRSTGAE 262
D R+K RELL AL ++D+ + +P V A +E ++ G S+
Sbjct: 131 DPVRNKSRELLQKAL----------LVDK-DKFNPQFVSLMAAKIEEAIYNFHGNSSSDT 179
Query: 263 KL--KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K K RS N++D KNPDLR V+ G ++P++L +M PEEMAS + Q + ++A+
Sbjct: 180 KYRNKIRSRYSNLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEAI 239
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ Q TD F C +C +KCTY Q+QTRSADEPMTT+V C+ C RWKFC
Sbjct: 240 NDHQMAQNEGTQTDMFSCGKCKSKKCTYTQLQTRSADEPMTTFVYCMACGNRWKFC 295
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 244 AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
A+ +E F+ L ++G E + K RS+ NI+D+ NP LR ++LG+VTP+++V MS EE
Sbjct: 185 AIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 244
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
MAS+ + E + EK LF+ + G A TD FKCSRC QRKCTYYQMQTRSADEPMT
Sbjct: 245 MASESVRLLNEKLAEKNLFKAKAVGVTQAETDAFKCSRCQQRKCTYYQMQTRSADEPMTV 304
Query: 363 YVTCVNCSKR 372
+ N KR
Sbjct: 305 HGELPNQKKR 314
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 137 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 185
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 186 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 245
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 246 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 300
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +F++L +
Sbjct: 141 DSVRMKCREMLAAALKTGDDYIAIGADEE-----------ELGSQIEEAIFQELKNTDMK 189
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+R M+ EEMASDE + +N+ ++A+
Sbjct: 190 YKNRVRSRIANLKDTKNPNLRKNVLCGNIAPDRFAKMTAEEMASDELKEMRKNLTKEAIR 249
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 250 EHQMAKTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 302
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 116 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 164
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 165 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 224
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 225 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 279
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 12/187 (6%)
Query: 192 TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
TI+TPK+T I C D+ R+K RE+L AL + D + + C+ ++ +
Sbjct: 121 TISTPKITTFPPIPITC-DAVRNKCREMLTAAL-----QTDNDHVAIGADCE--HLSAQI 172
Query: 248 ESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
E +++ + + K + RS + N++D KNPDLRK VL G +TPE++ M+ EEMAS+E
Sbjct: 173 EEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNE 232
Query: 308 RQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCV 367
+ + + ++A+ E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C
Sbjct: 233 LKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCN 292
Query: 368 NCSKRWK 374
C RWK
Sbjct: 293 ECGNRWK 299
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
E+E+V + K + DG +D LK LKS P+T D+L ST++G +
Sbjct: 5 EEEIVRIAKRLDKMVTKKSTDGA----------MDLLKELKSMPITLDLLQSTRIGMSVN 54
Query: 62 PLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN---KKNGSTGDKSS 104
L K +++ +A +L+ WKK++ +N K+N S SS
Sbjct: 55 ALRKQSTDDEVISLAKSLIKSWKKLLDASEDKNDEKKRNSSLATSSS 101
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 10/174 (5%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE----KLGRSTGAEKL 264
RDK R+ L A + E++D C+ ++ VES +++ K G S L
Sbjct: 152 RDKARQFLWKAFVMGVPVSQAELMDPSQVCE---ISAEVESALYKEYIIKQGNSVRDYNL 208
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ ++I +N+ D KNP+L ++ +G++TP+ + TM EMAS+ +Q++ E K+++L CQ
Sbjct: 209 QLKTIKWNLGDLKNPELNSKLYIGKITPDEIATMHSREMASEAKQKEREKHKQESLEACQ 268
Query: 325 RGGEATATTD---QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ QF C +C K TY+QMQTRSADEPMTT+V C+NC RWKF
Sbjct: 269 SDWDLRNLVQKEGQFTCGKCRTNKTTYFQMQTRSADEPMTTFVRCLNCGNRWKF 322
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 137 DSVRLKCREMLAAALRTGEDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 185
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 186 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 245
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 246 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 300
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|330796078|ref|XP_003286096.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
gi|325083915|gb|EGC37355.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
Length = 310
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 170/350 (48%), Gaps = 61/350 (17%)
Query: 30 EVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEE 89
E+ + ++ LK+ F + +VL ST +GK + L H I +S L+D WKK +
Sbjct: 19 ELDKVLEYLKKANDFEINKEVLKSTDIGKTVGKLRTHKDIGISKQSSILIDKWKKDI--- 75
Query: 90 TTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSE 149
+KS T + P S K + + ++ S+ V+ T +V++ E
Sbjct: 76 -----------EKS---TPISTPTSTKPASSAASPSSSFKRKSSD---TVQTTTTVAKQE 118
Query: 150 TVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSR 209
+E++ + +++ EE+K + + K + I T + R
Sbjct: 119 ---IEERPS--------------KRVFEEKKISTTTFKCTITPIKTGG-------DAGQR 154
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
+K+ +LLA +L T E DE + P VA VE+ ++ T K K RS
Sbjct: 155 NKMIQLLAESL---TREIDETL------SSPEDVATEVEAELYSIYKGLTADYKNKVRSF 205
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE---RQRQIENIKEKALFECQRG 326
FN+ + N LR +L +T E+ +M MASDE +R+++ + +A G
Sbjct: 206 KFNL--QSNDGLRDSLLNRILTIEKFCSMDVMSMASDELKEERRKLDKFQTEA---SMIG 260
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
ATTDQF+C +C QR+CTY+QMQTRSADEPMTT+V C+NC RWKFC
Sbjct: 261 TNNEATTDQFQCGKCKQRRCTYFQMQTRSADEPMTTFVRCINCGNRWKFC 310
>gi|449020026|dbj|BAM83428.1| probable transcription elongation factor S-II [Cyanidioschyzon
merolae strain 10D]
Length = 794
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 4/111 (3%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE-RQRQIENIKEKALFEC 323
KYR + N+R +N DLR R+L E++P LV MS E + +++ R+R+ E I E+ LF
Sbjct: 686 KYRELKANLR--RNADLRWRLLRQELSPAELVDMSAEALKTEQAREREAE-IAERMLFHK 742
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
QRG A+TDQF+C +CGQR CTY+QMQTRSADEPMTT+VTC +C RWK
Sbjct: 743 QRGIPQAASTDQFRCGKCGQRSCTYFQMQTRSADEPMTTFVTCTHCGNRWK 793
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 178/354 (50%), Gaps = 44/354 (12%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 27 LDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL------- 79
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
S G P G+ + ++ + K +++ ++ K E S R +
Sbjct: 80 ---DSPG-----------PLKGEKGEEREKAKKKEKRLDCSD-WKPEAGLSPPREKR--- 121
Query: 154 EKKETNGDSVMDRGEAVK------VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC- 204
E+ +T DS + A VE+ + +A S + PS T + L C
Sbjct: 122 EEPQTRRDSADSKSSATSSPRRPSVERSNSSKSKAESPKTPSSPLTPTFASSICLLAPCY 181
Query: 205 --NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
DS RDK E+L+ AL +AD++ D CD ++A +E ++++L +
Sbjct: 182 LTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKY 234
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E
Sbjct: 235 RNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIRE 294
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 295 HQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 348
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 65/345 (18%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 4 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 56
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + DK S ++ +K +AV + A SR
Sbjct: 57 --DGPSTDKDS-------------EEKKKDTAVTSQNSPEAREESSSSGNMSSR------ 95
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 96 -KDETNAR-----------DTYVSSFPRAPST-------------------SDSVRLKCR 124
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + D + V + + + ++++ + K + RS
Sbjct: 125 EMLAAALRTGDDYIAIGADEEELGSQIEEDILCVYIHIVPI-YQEIRNTDMKYKNRVRSR 183
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 184 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 243
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 244 GTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 288
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 117 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEMRNTDMK 165
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 166 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 225
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 226 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 280
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 127 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 175
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 176 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 235
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 236 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 290
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 102/176 (57%), Gaps = 8/176 (4%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE+LA AL V ADEE + D + V V + ++++ +
Sbjct: 182 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEDILSVLVPI----YQEIRNTDM 237
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 238 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 297
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 298 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 353
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 100/176 (56%), Gaps = 15/176 (8%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 148 SDSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDM 196
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 197 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 256
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 257 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 312
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 117 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 165
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 166 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 225
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 226 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 280
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 160 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 208
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 209 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 268
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 269 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 323
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 301
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 117 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 165
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 166 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 225
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 226 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 280
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 97 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 145
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 146 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 205
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 206 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 260
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 117 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 165
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 166 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 225
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 226 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 280
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 176 IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV 235
++EEK +++ Q T P T D+ R K RELLA AL D I+
Sbjct: 126 MKEEKPHKDIQR-KQSTFPAPTTT------DAVRLKCRELLAAAL-----RVDGNTIE-- 171
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
P +A +E ++ + + K + RS + N+RD KNP+LR + G +TP RL
Sbjct: 172 GCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARL 231
Query: 296 VTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRS 355
M+ EEMASDE ++ E K++A+ + Q TD KC +C +R CTY Q+QTRS
Sbjct: 232 AVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRS 291
Query: 356 ADEPMTTYVTCVNCSKRWKFC 376
ADEPMTT+V C C RWKFC
Sbjct: 292 ADEPMTTFVLCNECGNRWKFC 312
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 12/170 (7%)
Query: 210 DKIRE----LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DKIR L+ NAL + E+ II + D V+ G++ + +
Sbjct: 131 DKIRNNCIGLMYNALVIDSDESSSLIIAKAKEIDA--------QVLARAAGKTGSEYRNR 182
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++D+ NP LR VL E+TP+RL TM+ E+AS++R+++ ++++ LF Q
Sbjct: 183 MRSLYMNLKDKNNPKLRASVLRNEITPQRLSTMTSAELASEDRRKEDAKLEQENLFHAQG 242
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A TD F C +C Q+K +YYQMQTRSADEPMTT+ C C RWKF
Sbjct: 243 AKPQKAVTDLFTCGKCKQKKVSYYQMQTRSADEPMTTFCECTVCGNRWKF 292
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 103 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 151
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 152 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 211
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 212 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 266
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D RDK +++A+AL + D++ C+ R+A +E ++ + + + +
Sbjct: 290 DPVRDKCVDMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYRDIKATDMKYRNR 342
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP+LRK VL G VTP+ + TM+ EEMASDE + + ++A+ E Q
Sbjct: 343 IRSRISNLKDPKNPNLRKNVLCGVVTPQNIATMTAEEMASDELRELRNTMTQEAIREHQM 402
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD +C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 403 AKTGGTTTDLLQCEKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 453
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 176 IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV 235
++EEK +++ Q T P T D+ R K RELLA AL D I+
Sbjct: 125 MKEEKPHKDIQR-KQSTFPAPTTT------DAVRLKCRELLAAAL-----RVDGNTIE-- 170
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
P +A +E ++ + + K + RS + N+RD KNP+LR + G +TP RL
Sbjct: 171 GCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARL 230
Query: 296 VTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRS 355
M+ EEMASDE ++ E K++A+ + Q TD KC +C +R CTY Q+QTRS
Sbjct: 231 AVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRS 290
Query: 356 ADEPMTTYVTCVNCSKRWKFC 376
ADEPMTT+V C C RWKFC
Sbjct: 291 ADEPMTTFVLCNECGNRWKFC 311
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRV---AVSVESVMFEKLGRSTGAE 262
D R+K RELL AL ++D+ + P V A +E ++ G S+
Sbjct: 131 DPVRNKSRELLQKAL----------LVDK-DKFSPQFVSLMAAKIEEAIYNFHGNSSSDT 179
Query: 263 KL--KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K K RS N++D KNPDLR V+ G ++P++L +M PEEMAS + Q + ++A+
Sbjct: 180 KYRNKIRSRYSNLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEAI 239
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ Q TD F C +C +KCTY Q+QTRSADEPMTT+V C+ C RWKFC
Sbjct: 240 NDHQMAQNEGTQTDMFSCGKCKSKKCTYTQLQTRSADEPMTTFVYCMACGNRWKFC 295
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 193 IATPKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
I +P L C DS RDK E++A+AL + D++ C+ R+A +E
Sbjct: 466 IHSPSSCLLGPCYLTGDSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEE 518
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
++ ++ + + + RS + N++D KNP+LRK VL G VTP+ + TM+ EEMASDE +
Sbjct: 519 CIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELR 578
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ ++A+ E Q TD +C +C ++ C+Y Q+QTRSADEPMTT+V C C
Sbjct: 579 ELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNEC 638
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 639 GNRWKFC 645
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 193 IATPKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
I +P L C DS RDK E++A+AL + D++ C+ R+A +E
Sbjct: 466 IHSPSSCLLGPCYLTGDSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEE 518
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
++ ++ + + + RS + N++D KNP+LRK VL G VTP+ + TM+ EEMASDE +
Sbjct: 519 CIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELR 578
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ ++A+ E Q TD +C +C ++ C+Y Q+QTRSADEPMTT+V C C
Sbjct: 579 ELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNEC 638
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 639 GNRWKFC 645
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 193 IATPKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
I +P L C DS RDK E++A+AL + D++ C+ R+A +E
Sbjct: 466 IHSPSSCLLGPCYLTGDSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEE 518
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
++ ++ + + + RS + N++D KNP+LRK VL G VTP+ + TM+ EEMASDE +
Sbjct: 519 CIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELR 578
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ ++A+ E Q TD +C +C ++ C+Y Q+QTRSADEPMTT+V C C
Sbjct: 579 ELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNEC 638
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 639 GNRWKFC 645
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 183/435 (42%), Gaps = 74/435 (17%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
E+ELV + K DG +D L+ LKSF +T +L T++G +
Sbjct: 4 EEELVRIAKKLDKMVSRNTTDGA----------MDLLRELKSFNMTLKLLQETRIGVSVN 53
Query: 62 PLTKH-PREKIQIVASNLLDIWKKIVIEETTRNKKNG-STGDKSSVTTGVVKPD------ 113
+ KH E++ +A L+ WK+++ E KNG ++ + G PD
Sbjct: 54 SIRKHCADEEVIALAKVLIKDWKRLLDAEKPAGLKNGLDPARAAAASPGSSPPDTQNRRD 113
Query: 114 --SGK-----IDKVQKTSAVKVEKVSTAETVKVEKTGS--------------VSRSETVQ 152
SG+ D QK + K TGS S ++ +
Sbjct: 114 SSSGRGSAKPSDDAQKRDRRESVDSKAGPPPKRNSTGSKPERRESSDSKKSSSSPAKKLT 173
Query: 153 VEKKETNGDSVMDRGEAVKVEKIIEEEKQAPS---------VRKPSQGTIATPKLTQLIK 203
E++E+ G G + E++ + S G + P L+
Sbjct: 174 AERRESQGSRSSQPGPPQRKPSTDSSERRPKADTPKTPTTPTSPTSPGGLLPPHLS---- 229
Query: 204 CNDSSRDKIRELLANAL--------------SKVTSEADEEIIDEVNACDP----IRVAV 245
+S RDK E+LA AL S D ++ V+ P + +
Sbjct: 230 TGESVRDKCIEMLAAALRTDNDYKEFGTNCDSMAAEIEDHILLPAVSRYQPSASTLTSGL 289
Query: 246 SVESVMFEKLGRSTGAEKLKY----RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
+ + + A +KY RS + N++D KNP LRK VL G + R+ +MS E
Sbjct: 290 DLLDSTLAHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAE 349
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
EMASDE ++ + ++A+ E Q TTD +C +C ++ CTY Q+QTRSADEPMT
Sbjct: 350 EMASDELKQLRNTLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMT 409
Query: 362 TYVTCVNCSKRWKFC 376
T+V C C RWKFC
Sbjct: 410 TFVLCNECGNRWKFC 424
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 12/185 (6%)
Query: 194 ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
+TP++T I CN + R+K RE+L AL + D + + C+ R++ +E
Sbjct: 122 STPRITTFPPVPITCN-AVRNKCREMLTTAL-----QTDHDHVAVGADCE--RLSAQIEE 173
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
+F +G + K + RS + N++D KNP+LR+ VL G +TP+++ M+ EEMASDE +
Sbjct: 174 CIFRDVGNTDMKYKNRVRSRISNLKDAKNPELRRNVLCGTITPQQIAVMTSEEMASDELK 233
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ + ++A+ E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C
Sbjct: 234 EIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 293
Query: 370 SKRWK 374
RWK
Sbjct: 294 GNRWK 298
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 12/185 (6%)
Query: 194 ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
+TP++T + C D+ R+K RE+L AL + D + + C+ R++ +E
Sbjct: 121 STPRITTFPPVPVTC-DAVRNKCREMLTAAL-----QTDHDHVAIGADCE--RLSAQIEE 172
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
+F +G + K + RS + N++D KNPDLR+ VL G +TP+++ M+ EEMASDE +
Sbjct: 173 CIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELK 232
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ + ++A+ E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C
Sbjct: 233 EIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 292
Query: 370 SKRWK 374
RWK
Sbjct: 293 GNRWK 297
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 87
Query: 94 KKNG 97
++ G
Sbjct: 88 RERG 91
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 174/361 (48%), Gaps = 27/361 (7%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASN--LLDIWKKIVIEETT- 91
+D LK L + +T +L +T++G + + KH ++ ++VAS L+ WK+++ TT
Sbjct: 27 LDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDE-EVVASAKILIKNWKRLLESTTTK 85
Query: 92 ------RNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSV 145
R K+ + GDK V S + + T+ EK + K + +
Sbjct: 86 KEKDADRKKEKDTDGDKEKKGLDVSSCPSEGVKHSKNTAEKHREKHKERKPSKCDSHATT 145
Query: 146 SRSETVQVE-KKETNGDSVMDRGEAVKVEKIIEEEKQAPS------VRKPSQGTIATPKL 198
++ + ++ + DS + + ++A S V + +P
Sbjct: 146 TQGHSADSSPERRASADSRSSTLSSSSSSQKRLSGERANSSNVKTEVPRSPTSPSFSPSP 205
Query: 199 TQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKL 255
L C DS RDK E+L AL D++ + C+ ++A +E +F++L
Sbjct: 206 CFLAPCYLTGDSVRDKCIEMLTAAL-----RMDDDYKEFGVNCE--KMASEIEDHIFQEL 258
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI 315
+ + + RS + N++D KNP LR+ VL G + P + M+ EEMASDE ++ +
Sbjct: 259 KSTDMKYRNRVRSRISNLKDPKNPALRRNVLCGAIEPSLIARMTAEEMASDELKKLRNAM 318
Query: 316 KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
++A+ E Q TD F+C +C ++ CTY Q+QTRSADEPMTT+V C C RWKF
Sbjct: 319 TQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKF 378
Query: 376 C 376
C
Sbjct: 379 C 379
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 99/173 (57%), Gaps = 12/173 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEV-NAC-DPIRVAVSVESVMFEKLGRSTGAEK 263
D+ R K RE+LA AL I EV C +P +A +E ++ + + K
Sbjct: 151 DAVRIKCREMLATALK----------IGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYK 200
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N++D KNP LR + G VT ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 201 NRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDA 260
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC++C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 261 QLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 72 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 120
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 121 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 180
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 181 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 235
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 72 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 120
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 121 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 180
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 181 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 235
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 114/204 (55%), Gaps = 26/204 (12%)
Query: 184 SVRKPSQG-TIATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
S +KP T +TP++T I C D+ R+K RE+L AL + D
Sbjct: 110 SCKKPDPPRTPSTPRITTFPQVPITC-DAVRNKCREMLTLAL-----QTDH--------- 154
Query: 239 DPIRVAVSVESV------MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTP 292
D + V V+ E + +F +G + K + RS + N++D KNP LR+ VL G +TP
Sbjct: 155 DHVAVGVNCEHLSSQIEDIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITP 214
Query: 293 ERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQ 352
+++ M+ EEMASDE + + + ++A+ E Q TD F C++C ++ CTY Q+Q
Sbjct: 215 QQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQ 274
Query: 353 TRSADEPMTTYVTCVNCSKRWKFC 376
TRS+DEPMTTYV C C RWKFC
Sbjct: 275 TRSSDEPMTTYVVCNECGNRWKFC 298
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKI--VIEETT 91
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK+ V + +
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKS 86
Query: 92 RNKKNGSTGDKSS 104
RN+ G+ SS
Sbjct: 87 RNQGRGTPLPTSS 99
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 10/184 (5%)
Query: 196 PKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF 252
P + L C DS RDK E+L+ AL +AD++ D CD ++A +E ++
Sbjct: 212 PSVCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGINCD--KMASEIEDHIY 264
Query: 253 EKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQI 312
++L + + + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE +
Sbjct: 265 QELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELR 324
Query: 313 ENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKR 372
+ ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C R
Sbjct: 325 NAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNR 384
Query: 373 WKFC 376
WKFC
Sbjct: 385 WKFC 388
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
Query: 1 MEQELVELFDAAKKAADSAAIDGVSSGGP-EVSRCVDALKRLKSFPVTYDVLVSTQVGKR 59
ME+EL+ELF+A KKAAD+AA V+SG P E RC+DALK+LK FPVTY VLVSTQVGKR
Sbjct: 1 MEKELLELFEATKKAADAAA---VNSGAPSEEERCLDALKQLKDFPVTYQVLVSTQVGKR 57
Query: 60 LRPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDK 119
LR LTKHP +KIQ +AS+L+DIWK IVIEETT+NKKNG DK S P++ K
Sbjct: 58 LRTLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNGDLEDKESPKPVTANPENVKATP 117
Query: 120 VQKTS 124
+ K S
Sbjct: 118 LLKPS 122
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Query: 155 KKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRE 214
K + NGD ++ E+ K E +A + KPS + PKLT + KCND+ RDK+RE
Sbjct: 90 KNKKNGD--LEDKESPKPVTANPENVKATPLLKPSHNIVGPPKLTSISKCNDALRDKVRE 147
Query: 215 LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEK 254
LL+ ALSKV EADE+I+D VNACDPIRVAVSVESVMFEK
Sbjct: 148 LLSEALSKVVGEADEDIMDAVNACDPIRVAVSVESVMFEK 187
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 104/191 (54%), Gaps = 17/191 (8%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRV 243
PS I P + +DS R K RE+L+ AL + ADEE +
Sbjct: 125 PSNSFI--PSFPRAPSTSDSVRVKCREMLSAALRTGDDYIAIGADEE-----------EL 171
Query: 244 AVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEM 303
+E +F++L + K + RS + N++D KNP+LRK VL G + P++ M+ EEM
Sbjct: 172 GSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEM 231
Query: 304 ASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTY 363
ASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+
Sbjct: 232 ASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
Query: 364 VTCVNCSKRWK 374
V C C RWK
Sbjct: 292 VVCNECGNRWK 302
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 10/177 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE----KLGRSTGA 261
D RDK R L A+ + +++ E C+ +A +ESV+ K S
Sbjct: 159 DVMRDKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHREYIVKGDNSVRD 215
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
L+ ++I +N+ D KNP+L ++ +G++TPE + M EMASD +Q++ E K+++L
Sbjct: 216 YNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQESLE 275
Query: 322 ECQRGGEATATTD---QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
CQ + QF C +C K TYYQMQTRSADEPMTT+V C+NC RWKF
Sbjct: 276 ACQSDWDLRNLIQKEGQFTCGKCKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRWKF 332
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 10/177 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE----KLGRSTGA 261
D RDK R L A+ + +++ E C+ +A +ESV+ K S
Sbjct: 159 DVMRDKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHREYIVKGDNSVRD 215
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
L+ ++I +N+ D KNP+L ++ +G++TPE + M EMASD +Q++ E K+++L
Sbjct: 216 YNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQESLE 275
Query: 322 ECQRGGEATATTD---QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
CQ + QF C +C K TYYQMQTRSADEPMTT+V C+NC RWKF
Sbjct: 276 ACQSDWDLRNLIQKEGQFTCGKCKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRWKF 332
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 12/210 (5%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC---NDSSRDKIRELLANALSKVTSE 226
VE+ + +A S + PS T + L C DS RDK E+L+ AL +
Sbjct: 146 VERSNSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----K 200
Query: 227 ADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVL 286
AD++ D CD ++A +E ++++L + + + RS + N++D +NP LR+ VL
Sbjct: 201 ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVL 258
Query: 287 LGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKC 346
G ++ + M+ EEMASDE + + ++A+ E Q TTD F+CS+C ++ C
Sbjct: 259 SGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNC 318
Query: 347 TYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 319 TYNQVQTRSADEPMTTFVLCNECGNRWKFC 348
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 176/354 (49%), Gaps = 44/354 (12%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 27 LDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL------- 79
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
S G P G+ K ++ + K + + ++ K E S R +
Sbjct: 80 ---DSPG-----------PPKGEKGKEREKAKKKEKGLDCSD-WKPEAGLSPPRKKR--- 121
Query: 154 EKKETNGDSVMDRGEAVK------VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC- 204
E +T DSV + A VE+ + +A S R PS T + L C
Sbjct: 122 EDPKTRRDSVDSKSSATSSPKRPSVERSNSSKSKAESPRTPSSPLTPTFASSICLLAPCY 181
Query: 205 --NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
DS RDK E+L+ AL +AD++ D CD ++A +E ++++L +
Sbjct: 182 LTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKY 234
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E
Sbjct: 235 RNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIRE 294
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK C
Sbjct: 295 HQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKVC 348
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 99/173 (57%), Gaps = 12/173 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEV-NAC-DPIRVAVSVESVMFEKLGRSTGAEK 263
D+ R K RE+LA AL I EV C +P +A +E ++ + + K
Sbjct: 149 DAVRIKCREMLATALK----------IGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYK 198
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N++D KNP LR + G VT ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 199 NRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMTPEEMASDEMKKLREKFVKEAINDA 258
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC++C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 259 QLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 311
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 12/210 (5%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC---NDSSRDKIRELLANALSKVTSE 226
VE+ + +A S + PS T + L C DS RDK E+L+ AL +
Sbjct: 118 VERSNSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----K 172
Query: 227 ADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVL 286
AD++ D CD ++A +E ++++L + + + RS + N++D +NP LR+ VL
Sbjct: 173 ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVL 230
Query: 287 LGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKC 346
G ++ + M+ EEMASDE + + ++A+ E Q TTD F+CS+C ++ C
Sbjct: 231 SGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNC 290
Query: 347 TYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 291 TYNQVQTRSADEPMTTFVLCNECGNRWKFC 320
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
+DS R K RE+LANAL + E+ I C+ + +E +F++ + K
Sbjct: 131 SDSIRLKCREMLANAL-----QTGEDYIAIGADCE--ELGAQIEECIFQEFKNTDMKYKN 183
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP+LR+ VL G V+PER+ M+ EEMASDE + +N+ ++A+ + Q
Sbjct: 184 RVRSRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDELKEMRKNLTKEAVRDHQ 243
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TD F C +C + CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 244 MATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMTTFVFCNQCGNRWK 293
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS RDK E+L+ AL +AD++ D CD ++A +E ++++L + + +
Sbjct: 164 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNR 216
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 217 VRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 276
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 277 AKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 327
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 166/352 (47%), Gaps = 40/352 (11%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 171 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDS----- 225
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
P K +K ++ K EK K E S R + +
Sbjct: 226 ------------------PGPPKGEKGEERDKAKKEKGLDCSDWKAETGLSPPRKKRGEE 267
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEK----QAPSVRKPSQGTIAT--PKLTQLIKC--- 204
K + + +E +A S + P T P + L C
Sbjct: 268 PKDRRDSVGSKSSASSSPKRPSMERSNSSTSKAESPKTPGSPLTPTFAPSVCLLAPCYLT 327
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
DS RDK E+L+ AL +A+++ D CD ++A +E ++++L + +
Sbjct: 328 GDSVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRN 380
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 381 RVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQ 440
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 441 MAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 492
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 12/187 (6%)
Query: 194 ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
+ P++T + C D+ R+K RE+L AL + D + + C+ + + +E
Sbjct: 122 SAPRITTFPPVPVTC-DAVRNKCREMLTAAL-----QTDRDHMAVGADCEGL--SAQIEE 173
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
+F +G + + + RS + N++D KNPDLR+ VL G +TP+++ M+ EEMASDE +
Sbjct: 174 CIFRDVGNTDMKYRNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELK 233
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ + ++A+ E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C
Sbjct: 234 EIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRRKNCTYTQVQTRSSDEPMTTFVVCNEC 293
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 294 GNRWKFC 300
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 28 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 80
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 196 PKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF 252
P + L C DS RDK E+L+ AL +A++ D CD ++A +E ++
Sbjct: 116 PAVCLLAPCYLTGDSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIY 168
Query: 253 EKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQI 312
++L + + + RS + N++D +NP LR+ VL G ++PE + M+ EEMASDE +
Sbjct: 169 QELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELR 228
Query: 313 ENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKR 372
+ ++A+ E Q TTD +CS+C ++ CTY Q+QTRSAD PMTT+V C C R
Sbjct: 229 NAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADAPMTTFVLCNECGNR 288
Query: 373 WKFC 376
WKFC
Sbjct: 289 WKFC 292
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 99/173 (57%), Gaps = 12/173 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEV-NAC-DPIRVAVSVESVMFEKLGRSTGAEK 263
D+ R K RE+LA AL I EV C +P +A +E ++ + + K
Sbjct: 151 DAVRIKCREMLAAALK----------IGEVPEGCGEPEEMAAELEDAIYSEFKNTDMKYK 200
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N++D KNP LR + G VT ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 201 NRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDA 260
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC++C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 261 QLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 16/193 (8%)
Query: 186 RKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV--NACDPIRV 243
+KPS + P D+ R K RE+L NAL I EV +P +
Sbjct: 145 KKPSSAQTSFPAGGM----TDAVRLKCREMLTNALK----------IGEVPEGCAEPEEM 190
Query: 244 AVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEM 303
A +E ++ + + K + RS + N++D KNP LR + G V+ ++L M+PEEM
Sbjct: 191 AAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEM 250
Query: 304 ASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTY 363
ASDE ++ E ++A+ + Q TD KC +C +R CTY Q+QTRSADEPMTT+
Sbjct: 251 ASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTF 310
Query: 364 VTCVNCSKRWKFC 376
V C C RWKFC
Sbjct: 311 VMCNECGNRWKFC 323
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 13/189 (6%)
Query: 189 SQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVE 248
S G + P L DS RDK E+LA AL T + +E VN CD + +E
Sbjct: 344 SAGGLLPPHLA----TGDSIRDKCIEMLAAALR--TDDDHKEF--GVN-CDSM--GAEIE 392
Query: 249 SVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDER 308
+++++ + K + RS + N++D KNP LR+ VL G + R+ +MS EEMASDE
Sbjct: 393 DYIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDE- 451
Query: 309 QRQIENI-KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCV 367
+Q+ N+ ++A+ E Q TTD +C +C ++ CTY Q+QTRSADEPMTT+V C
Sbjct: 452 LKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCNKKNCTYNQVQTRSADEPMTTFVLCN 511
Query: 368 NCSKRWKFC 376
C RWKFC
Sbjct: 512 ECGYRWKFC 520
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 193 IATPKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
I +P L C DS RDK E++A+AL + D++ C+ R+A +E
Sbjct: 110 IHSPSSCLLGPCYLTGDSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEE 162
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
++ ++ + + + RS + N++D KNP+LRK VL G VTP+ + TM+ EEMASDE +
Sbjct: 163 CIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELR 222
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ ++A+ E Q TD +C +C ++ C+Y Q+QTRSADEPMTT+V C C
Sbjct: 223 ELRNTMTQEAIREHQMAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNEC 282
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 283 GNRWKFC 289
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKF
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKF 300
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 12/173 (6%)
Query: 206 DSSRDKIRELLANAL--SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEK 263
D R K RE+L +AL + S A E +A+ +ES +++ + K
Sbjct: 156 DQVRLKAREMLQSALESGNIPSGAYESEF----------LAIRIESSIYDLFNNTDPKYK 205
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ R+ + N+RD NP+LR VL+G V+P++L +M+ EEMAS E + E ++ + +
Sbjct: 206 QRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELREKYTKETIEDH 265
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD +C +C Q KCTY Q+QTRSADEPMTT+V C NC RWKFC
Sbjct: 266 QMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADEPMTTFVYCNNCGHRWKFC 318
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 106/187 (56%), Gaps = 13/187 (6%)
Query: 191 GTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESV 250
G +P LT DS RDK E+LA AL D + + C+ + +E
Sbjct: 446 GGPLSPHLT----TGDSIRDKCIEMLAAAL-----RTDNDYKEFGANCESM--GAEIEDH 494
Query: 251 MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR 310
+++++ + K + RS + N++D KNP LRK VL G + R+ TMS EEMASDE +
Sbjct: 495 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGSIELRRIATMSAEEMASDE-LK 553
Query: 311 QIENI-KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
Q+ N+ ++A+ E Q TTD +C +C ++ CTY Q+QTRSADEPMTT+V C C
Sbjct: 554 QLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNEC 613
Query: 370 SKRWKFC 376
RWKFC
Sbjct: 614 GNRWKFC 620
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 16/176 (9%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESV-MFEKLGRSTG 260
DS R K RE+LA AL V ADEE + +E V +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEVPIYQEIRNTDM 186
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 246
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 302
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 79/111 (71%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS++ N++++ NP LR+ +L E+ P +LVTMS +E+A D ++++E I +K LF+ Q
Sbjct: 174 KLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNLFDAQ 233
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E + TD+F+C +C QRK +Y+Q QTRSADEP+TT+ C NC RWKF
Sbjct: 234 GATENNSVTDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRWKF 284
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 99/173 (57%), Gaps = 12/173 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEV-NAC-DPIRVAVSVESVMFEKLGRSTGAEK 263
D+ R K RE+LA AL I EV C +P +A +E ++ + + K
Sbjct: 151 DAVRIKCREMLAAALK----------IGEVPEGCGEPEEMAAELEDAIYSEFKNTDMKYK 200
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N++D KNP LR + G VT ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 201 NRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDA 260
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC++C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 261 QLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 16/176 (9%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESV-MFEKLGRSTG 260
DS R K RE+LA AL V ADEE + +E V +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEVPIYQEIRNTDM 186
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 246
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 247 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 302
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 79/111 (71%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS++ N++++ NP LR+ +L E+ P +LVTMS +E+A D ++++E I +K LF+ Q
Sbjct: 218 KLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNLFDAQ 277
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E + TD+F+C +C QRK +Y+Q QTRSADEP+TT+ C NC RWKF
Sbjct: 278 GATENNSVTDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRWKF 328
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 169/375 (45%), Gaps = 54/375 (14%)
Query: 10 DAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPRE 69
D ++A DS A SG E V+AL L +T ++L T++G + L HP
Sbjct: 89 DDGQQAGDSGAAVTPLSGVRE--DVVEALTILDRVDMTRELLAKTRIGVSVGKLRTHPDV 146
Query: 70 KIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVE 129
+I+ + L+ WK I + K +G+ +G K +G
Sbjct: 147 QIRSRCTQLVHKWK-AGISGSCSTKDSGTLSRPGQNGSGQGKSHTG-------------- 191
Query: 130 KVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPS 189
++A +K +S +VQ G+ V EKI + P P+
Sbjct: 192 --TSANDKATDKKHGLSSQPSVQ-------GNGVQGVPGDKAPEKISTSAEDYPG---PA 239
Query: 190 QGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
G D+ RD+ R L AL + D + RVA +E
Sbjct: 240 SG--------------DAVRDRARGFLWRALVDGMQSGRDLGADRSG--ETARVAAEIEK 283
Query: 250 VMFEKLG---RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
++++ +ST ++ +++ +N D+KNPDL +VL G TPE+L TM+ ++ASD
Sbjct: 284 ALWQEYCVKRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLATMNSADLASD 343
Query: 307 ERQRQIENIKEKALFECQRGGEAT----ATTD--QFKCSRCGQRKCTYYQMQTRSADEPM 360
E++R E K++++ CQ E TD QF C +C K Y+QMQTRS+DEPM
Sbjct: 344 EKKRMRELQKKESMEACQSDWEMKKLMEGGTDGGQFPCFKCRTTKTVYFQMQTRSSDEPM 403
Query: 361 TTYVTCVNCSKRWKF 375
TT+VTC+ C RWKF
Sbjct: 404 TTFVTCLECGNRWKF 418
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 207 SSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
S+RDKIR+ A L + + + V ++A S+E +F + K +
Sbjct: 134 STRDKIRDGCAGMLYSSLASGTDAVASVV-----AKIASSIEKHIFAACECTDAKYKSRI 188
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R++ N++ N LR +VL G+++ +R M+ EEM S+ER ++E K+ ++ +
Sbjct: 189 RTLTSNLK--LNASLRSQVLGGKISTDRFAMMTAEEMMSEERVLEVEKAKKNSMADAVSA 246
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
A TD F+C RC QRK TYYQMQTRSADEPMTT+VTC +C +WKFC
Sbjct: 247 ANQEAETDMFRCGRCKQRKATYYQMQTRSADEPMTTFVTCCHCGNKWKFC 296
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 152 DSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 200
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 201 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 260
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKF
Sbjct: 261 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKF 314
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPS-QGTIATPKLTQL----IKCNDSSRDKIRELLANAL 220
RG + E PS ++P +TP++T + C D+ R+K RE+L AL
Sbjct: 68 RGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL 126
Query: 221 SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPD 280
+ D I D R++ +E +F +G + K + RS + N++D +NPD
Sbjct: 127 Q---TAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPD 179
Query: 281 LRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSR 340
LR+ VL G +TP+++ M+ EEMASDE + + + ++A+ E Q TD F C +
Sbjct: 180 LRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGK 239
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
C ++ CTY Q+QTRS+DEPMTT+V C C RWK
Sbjct: 240 CRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 273
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ +
Sbjct: 4 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKA 63
Query: 94 KKNG 97
++ G
Sbjct: 64 RERG 67
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
ND +R K +LL +AL E+ D DP +AV +E ++ +
Sbjct: 142 NDETRLKSAQLLLSALRY------GELPD--GTLDPEELAVQIEEKLYSVHRDTNKNYSA 193
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
RS +FN+RD+KN LR+ VL G V E+ TM+ EEMAS E + E ++A+ E Q
Sbjct: 194 AVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASPEIREMREKFTKEAILEHQ 253
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ +D FKC +CG++ CTY Q+QTRS+DEPMTT+V C+ C RWKFC
Sbjct: 254 VSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWKFC 305
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 99/175 (56%), Gaps = 15/175 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS + K RE+LA AL + ADEE + +E +++++ +
Sbjct: 121 DSVQLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 169
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 170 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKEAIR 229
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEP+TT+V C C RWKFC
Sbjct: 230 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRWKFC 284
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 85/127 (66%), Gaps = 5/127 (3%)
Query: 244 AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
A+ +E F+ L ++G E + K RS+ NI+D+ NP LR ++LG+VTP+++V MS EE
Sbjct: 178 AIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 237
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
MAS+ + E + EK LF+ + G A TD FKCSRC QRKCTYYQMQTRSADEPM
Sbjct: 238 MASESVRLLNEKLAEKNLFKAKAVGVTQAETDAFKCSRCQQRKCTYYQMQTRSADEPM-- 295
Query: 363 YVTCVNC 369
TC C
Sbjct: 296 --TCGGC 300
>gi|50310967|ref|XP_455506.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644642|emb|CAG98214.1| KLLA0F09361p [Kluyveromyces lactis]
Length = 292
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 101/171 (59%), Gaps = 15/171 (8%)
Query: 211 KIREL----LANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL-- 264
KIR++ L +AL+K + I+D V +S+E+ M + +
Sbjct: 130 KIRDMAIRALYDALAKESEHPPVAILDTV---------MSIETEMANLFNPESDEKGYRD 180
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
KYR I NI + NPDL+ R+ GEV+ + LVT P+++A + +++IE I+++ LF Q
Sbjct: 181 KYRIIYSNIISKNNPDLKHRITNGEVSAKHLVTADPKDLAPEHLKKKIEEIEKQNLFNAQ 240
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F+C +C QRK +YYQ+QTRSADEP+TT+ TC NC RWKF
Sbjct: 241 GATVERSVTDRFQCGKCKQRKVSYYQLQTRSADEPLTTFCTCENCGNRWKF 291
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 198 LTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGR 257
L+ ++ DS RDK E+L AL D++ D C+ + +E ++++
Sbjct: 238 LSPRLQTGDSIRDKCIEMLTAAL-----RTDDDYKDYGTNCEAM--GAEIEDYIYQETKA 290
Query: 258 STGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI-K 316
+ K + RS + N++D KNP+LRK VL G + R+ +M+ EEMASDE +Q+ N+
Sbjct: 291 TDMKYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDE-LKQLRNVLT 349
Query: 317 EKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
++A+ E Q TTD +C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 350 QEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 409
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
+ +RD L+ + L+ ++ +EI++ +A VE+ + G A K K
Sbjct: 145 NEARDNCVRLMYDGLAFMSEAMPDEILN---------IAKHVEAAAYSNAGSVNDAYKGK 195
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++++ NP LRKRVL GE+T +R V M+ +EM SD R+ + E ++++ + +
Sbjct: 196 MRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKENMNQAMV 255
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A + +F+C +C Q+K +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 256 AQVEKAISKEFQCGKCKQKKVSYSQAQTRSADEPMTTFCECMNCGNRWKF 305
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
+ +RD L+ + L+ ++ +EI++ +A VE+ + G A K K
Sbjct: 145 NEARDNCVRLMYDGLAFMSEAMPDEILN---------IAKHVEAAAYSNAGSVNDAYKGK 195
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS+ N++++ NP LRKRVL GE+T +R V M+ +EM SD R+ + E ++++ + +
Sbjct: 196 MRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKENMNQAMV 255
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A + +F+C +C Q+K +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 256 AQVEKAISKEFQCGKCKQKKVSYSQAQTRSADEPMTTFCECMNCGNRWKF 305
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 12/201 (5%)
Query: 179 EKQAPSVRKPSQGTI-ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIID 233
E Q PS ++P + +TP++T + C D+ R K RE+L AL + D + +
Sbjct: 91 EAQDPSRKRPELPRMPSTPRITTFPPVPVTC-DAVRTKCREMLTAAL-----QTDHDHVA 144
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
C+ + + E ++F +G + K + RS + N++D KNP LR++VL G +TP+
Sbjct: 145 IGADCECLAGQIE-EYILFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQ 203
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
++ M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+QT
Sbjct: 204 QIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQT 263
Query: 354 RSADEPMTTYVTCVNCSKRWK 374
RS+DEPMTT+V C C RWK
Sbjct: 264 RSSDEPMTTFVVCNECGNRWK 284
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 4 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 56
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R K RE+L NAL T + E +P +A+ +E ++ + + K +
Sbjct: 164 DAVRLKCREMLCNALK--TGDIPE------GWPEPEEMAIELEEAIYAEFRNTDMKYKNR 215
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP LR + G +T ++L M+PEEMASDE ++ E ++A+ + Q
Sbjct: 216 VRSRVANLKDPKNPTLRGNFMCGAITAQQLAKMTPEEMASDEMKKLREKFVKEAINDAQL 275
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 276 ATVQGTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTFVMCNECGHRWKFC 326
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 15/185 (8%)
Query: 196 PKLTQLIKCNDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVM 251
P + +DS + R +LA AL + ADEE + +E +
Sbjct: 107 PSFPRAPSTSDSVPMRCRGMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAI 155
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
+++L + K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE +
Sbjct: 156 YQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEM 215
Query: 312 IENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
+N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C
Sbjct: 216 HKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGN 275
Query: 372 RWKFC 376
RWKFC
Sbjct: 276 RWKFC 280
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 28/345 (8%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 4 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPK 63
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+ G DK+ G+ D + + + + + K + S+S
Sbjct: 64 GEKGEERDKAKKEKGLDCSD------WKPETDLSPPREKRGKEPKDRRDSVDSKSSASSS 117
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---NDSSRD 210
K+ M+R + K + E + PS P T A P + L C DS RD
Sbjct: 118 PKRPP-----MERSNSSKSK---AETPKTPS--SPLTPTFA-PSVCLLAPCYLTGDSVRD 166
Query: 211 KIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM 270
K E+L+ AL +A+++ D CD ++A +E ++++L + + + RS +
Sbjct: 167 KCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRI 219
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEAT 330
N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 220 SNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGG 279
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKF
Sbjct: 280 TTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKF 324
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 178/365 (48%), Gaps = 31/365 (8%)
Query: 18 SAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVAS 76
S ++ V + P +D LKRL S +T +L +T++G + + KH R E++ +A
Sbjct: 5 SHGMNDVCAVAPGAEGALDLLKRLNSCTMTIQLLQTTRIGIAVNTIRKHSRDEEVIALAK 64
Query: 77 NLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAET 136
L+ WK+++ ++ K +K S + G K ++ + E + E
Sbjct: 65 VLIKNWKRLLESSESQKGKEEKKREKGSPSPG---------PKAEEAFSRHTELCKSPEG 115
Query: 137 VKVEKTGSVSRSETVQVEKKETNGDSVM----DRGEAVKVEKIIEEEKQAPSVRKPSQGT 192
E+ S + ++ S DR + K E ++P+ P+ T
Sbjct: 116 KHKERRDSEDSLSSTVASSSSSSSSSPRRLSGDRSDG----KAKPEGPKSPT--SPTTPT 169
Query: 193 IATPKLTQLIKC---NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVES 249
A+ + L C DS RDK E+++ AL + D++ + CD ++A +E
Sbjct: 170 FAS-SVCFLPPCYLTGDSVRDKCIEMISAAL-----KMDDDYKEFGVNCD--KMAAEIED 221
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
++++L + + + RS + N++D KNP LR+ VL G ++ R+ M+ EEMASDE +
Sbjct: 222 HIYQELKGTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAISAGRIAKMTAEEMASDELK 281
Query: 310 RQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ ++A+ E Q TD F+C +C ++ CTY Q+QTRSADEPMTT+V C C
Sbjct: 282 ELRNAMTQEAIREHQMAKTGGTATDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNEC 341
Query: 370 SKRWK 374
RWK
Sbjct: 342 GNRWK 346
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 158/344 (45%), Gaps = 64/344 (18%)
Query: 34 CVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKH-PREKIQIVASNLLDIWKKIVIEETTR 92
C+ L L F +T +++ T +G ++ + K P E + N++ WK IV
Sbjct: 28 CIKLLDDLAKFQMTVEIIQQTSIGIKVNMMRKKVPDESLAKRTKNIIKEWKNIV------ 81
Query: 93 NKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQ 152
+ K+ S D + A K ++ + E KVEK +
Sbjct: 82 DSKSKSQDDSDA-------------------PAPKKQRKESVEEPKVEK-----KKIEAP 117
Query: 153 VEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKI 212
+++E+N +R E V Q S P PK + ND +R K
Sbjct: 118 YKRQESN-----NRPEIVA---------QFASASFP-------PKHLE----NDETRLKS 152
Query: 213 RELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFN 272
+LL +AL E + +D P +AV +E ++ + RS +FN
Sbjct: 153 AQLLLSALR--FGEMPQGTLD------PEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFN 204
Query: 273 IRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATAT 332
+RD+KN LR+ VL G V E+ TM+ EEMAS E + + ++A+ E Q +
Sbjct: 205 LRDKKNLALRENVLTGVVRAEKFATMTSEEMASPEIRNMRDKFTKEAILEHQMSVQQGTP 264
Query: 333 TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+D FKC +CG++ CTY Q+QTRS+DEPMTT+V C+ C RWKFC
Sbjct: 265 SDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWKFC 308
>gi|294883920|ref|XP_002771106.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
gi|239874344|gb|EER02922.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
Length = 308
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 17/193 (8%)
Query: 189 SQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVE 248
S G + ++ +C D RDKIR LL AL + + E P AV +E
Sbjct: 128 SSGNTDLTSVMEVARCGDPKRDKIRNLLFKALRPRRNPEEAE---------PAVRAVEIE 178
Query: 249 SVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDER 308
KL ++ RSI +N+ D NPD + +VL+G ++ T++ E+MAS+ +
Sbjct: 179 EECHSKLSEREYLSQI--RSIKYNLTDSSNPDFQWKVLVGLFPRDKYSTLTSEDMASEAK 236
Query: 309 QRQIENIKEKALFECQ-----RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTY 363
+ N + AL ECQ R G A + F+C +C + + TY+QMQTRS+DEPMTT+
Sbjct: 237 NQHRANAAKAALEECQSDWAMRHG-AIQKSGMFQCGKCRKSQTTYFQMQTRSSDEPMTTF 295
Query: 364 VTCVNCSKRWKFC 376
VTC+NC +WKFC
Sbjct: 296 VTCLNCGNKWKFC 308
>gi|238589160|ref|XP_002391938.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
gi|215457296|gb|EEB92868.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
Length = 125
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 78/124 (62%)
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
F G ++ + + RS+ N++D+ NP LR+ V+ G + ++L MS EMAS+ERQ
Sbjct: 1 FNSHGGASTEYRARIRSLFVNLKDKNNPGLRESVVSGLIAADKLAKMSSAEMASEERQAA 60
Query: 312 IENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
+ IK++ F E A TD F+C RC QRKC Y Q QTRSADEPMTT+VTC NC
Sbjct: 61 DQKIKQENFFASLGAEEQQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGN 120
Query: 372 RWKF 375
RWKF
Sbjct: 121 RWKF 124
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 27/363 (7%)
Query: 31 VSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEET 90
V +D L L + D+L T++G + TK ++IQ +A +L+D WK I I+E
Sbjct: 54 VKEIIDDLILLNDVEINKDILKQTKIGVTVNKFTKIKNDEIQSIAKDLVDKWKNIAIKEK 113
Query: 91 TRN-----------KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKV 139
+ K+ ++S T + KI KV+ ++ K E+ +T ++
Sbjct: 114 HSSSSGSKSAESLKKRKSELVERSDSHTCSEDYELKKI-KVKNSNEYKSEQ-ATIQSSNA 171
Query: 140 EKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLT 199
+++ + + K N D++ + E++K E K + K K
Sbjct: 172 NHNEPNNKTHDILLHTKHDNSDNIQIK-ESIKNSYQFSELKHMNTDLKALSEWNYNGKFH 230
Query: 200 QLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPI-RVAVSVESVMFEKLGRS 258
ND RDK ++ L A + + +ID D I + + + EK +S
Sbjct: 231 -----NDVLRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDIIYNIENELHKIFIEK-KQS 284
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
++ +SI FN+ D+KNP +++ ++P+ + TM+ +EMASDE++++ ++
Sbjct: 285 QKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMASDEKKKERNKCLQE 344
Query: 319 ALFECQRGGEATATT------DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKR 372
+L CQ + +F+C +C + Y+Q+QTRS+DEPMTT+VTC+ C+ R
Sbjct: 345 SLQACQSDWDVKNILLKKNRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNR 404
Query: 373 WKF 375
WKF
Sbjct: 405 WKF 407
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 7/172 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEKL 264
DS R K RELLA A+ T D+V+ C P +A +E +F + + K
Sbjct: 124 DSVRIKCRELLAAAIKGNTES------DQVDGCGSPEDLAEELEEAIFNEFRNTDIKYKN 177
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP+LR L+G + RL M+ EE+ASDE ++ + K++A+ + Q
Sbjct: 178 RIRSRVANLKDPKNPNLRMNYLIGALPASRLAVMTAEELASDEMKQIRDKFKKEAINDAQ 237
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 238 LATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 289
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
ND +R K +LL +AL + E + +D P +AV +E + +
Sbjct: 146 NDETRLKSAQLLLSALR--SGEMPQGTLD------PEELAVQIEEKLHSVHRGTNKNYSA 197
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
RS +FN+RD+KN LR+ VL G V E+ TM+ EEMAS E + + ++A+ E Q
Sbjct: 198 AVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASPEIRNMRDKFTKEAILEHQ 257
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ +D FKC +CG++ CTY Q+QTRS+DEPMTT+V C+ C RWKFC
Sbjct: 258 MSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWKFC 309
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 170/358 (47%), Gaps = 49/358 (13%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S+ ++ +L +T++G + + KH K + +A L+ WK+++ T
Sbjct: 4 LDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLLDSPATPK 63
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+ G ++ A K EK K E + S R + +V
Sbjct: 64 GEKGE----------------------ERVKAKKKEKGLDCSDWKPETSLSPPREK--RV 99
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKP--------SQGTIATPKLTQLIKC- 204
E+ + DSV + A K E+ S K TP + L C
Sbjct: 100 EEPKDRRDSVDSKSSATSSPKRPSMERSNSSKSKAETPRTPSSPSSPTFTPSVCLLAPCY 159
Query: 205 --NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
DS RDK E+L+ AL +AD++ D CD ++A +E + E LG +
Sbjct: 160 LTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHILE-LGELKSTD 211
Query: 263 KLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
+KYR S + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++
Sbjct: 212 -MKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE 270
Query: 319 ALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK C
Sbjct: 271 AIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKVC 328
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 172/364 (47%), Gaps = 31/364 (8%)
Query: 31 VSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEET 90
+ ++ L LK + D+L T++G + TK E+IQ VA +L+D WK I I+E
Sbjct: 84 IKEIIEDLISLKDVEINKDILKQTKIGVTVNKFTKIKNEEIQNVAKDLVDKWKNIAIKE- 142
Query: 91 TRNKKNGSTGDKSSVTTG------VVKPDSGKIDKVQKTSAVKVEKVS--TAETVKVEKT 142
K+ STG +S+ + V D+ + + VKV+ VS +A+ ++ +
Sbjct: 143 ----KHSSTGSRSAESLKKRKSELVEGSDNNTCSEDYELKKVKVKNVSEHSAKQGTIQ-S 197
Query: 143 GSVSRSETVQ-----VEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPK 197
GS + E + K N D + +G +V+ E K + K K
Sbjct: 198 GSPNHGEPNNKADHLLFSKHHNSDHLPIKG-SVQNSYHFSELKHVNTDLKALTEWNYNGK 256
Query: 198 LTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGR 257
ND RDK ++ L A + + +ID D I + F + +
Sbjct: 257 FH-----NDVLRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDIIYNIENELHKFFIEKKQ 311
Query: 258 STGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKE 317
S ++ +SI FN+ D+KNP +++ + P + TM+ +EMASDE++++ +
Sbjct: 312 SQKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQ 371
Query: 318 KALFECQRGGEATATT------DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
++L CQ + +F+C +C + Y+Q+QTRS+DEPMTT+VTC+ C+
Sbjct: 372 ESLQACQSDWDVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNN 431
Query: 372 RWKF 375
RWKF
Sbjct: 432 RWKF 435
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 85/138 (61%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +AV +E ++ + + RS +FN+RD+KN LR+ VL G V E+ TM
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+ EEMAS E + + ++A+ E Q + +D FKC +CG++ CTY Q+QTRS+DE
Sbjct: 231 TSEEMASAEIREMRDKFTKEAILEHQMSVQQGTPSDMFKCGKCGKKNCTYTQLQTRSSDE 290
Query: 359 PMTTYVTCVNCSKRWKFC 376
PMTT+V C+ C RWKFC
Sbjct: 291 PMTTFVFCLECGNRWKFC 308
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 101/174 (58%), Gaps = 13/174 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKL---GRSTGA 261
ND RD + + +AL+K + + I+ +A+ +E M+ KL +
Sbjct: 142 NDKLRDMVIKAFYDALAKQSEHPPQSIL---------AIAIDIEKHMY-KLKIPAENDKG 191
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K KYR I N+ + NPDL+ ++ G+++P+ LV P+E+A + ++++E I ++ LF
Sbjct: 192 YKDKYRVIYSNVISKNNPDLKHKITNGDISPDYLVNCDPKELAPEHLKKKLEEIAKQNLF 251
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + TD+F+C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 252 NAQGATLERSVTDRFQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 305
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS R K RE+L+NAL + ++ I + CD + +E +F + + K +
Sbjct: 146 DSVRIKCREMLSNAL-----QTGDDYITIGSDCD--ELGAQIEECIFLEFKNTDMKYKNR 198
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP+LR+ VL G V+P+R+ M+ EEMASDE + +N+ ++A+ + Q
Sbjct: 199 VRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDELKEMRKNLTKEAIRDHQV 258
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++KCTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 259 ATSGGTQTDLFTCGKCKKKKCTYTQVQTRSADEPMTTFVFCNECGNRWKFC 309
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
+RD L+ + L+ ++ E + DE+ + VA VE+ + G A K K R
Sbjct: 147 ARDACVRLMYDGLAYMS----EAMPDEI-----LLVAKQVEAAAYTNAGSVNDAYKAKMR 197
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++ + NP LRKRVL+GEV +R V M+ +EM SDER+ E +K + + E
Sbjct: 198 SLFQNLKSKSNPALRKRVLIGEVPAKRFVVMTHDEMKSDERRALDEKLKAENMNEAMVAQ 257
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A + +F+CS+C ++ +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 258 VEKAISKEFQCSKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRWKF 305
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 98/176 (55%), Gaps = 15/176 (8%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 154 SDSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDM 202
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + +D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 203 KYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 262
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 263 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 318
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 171/345 (49%), Gaps = 25/345 (7%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEE-TTR 92
+D LK+L S P++ +L +T++G + + K +K + +A L+ WK+++ +++
Sbjct: 27 LDLLKKLNSCPMSIQLLQTTRIGVAVNGVRKRCSDKEVVALAKVLIKNWKRLLDSPGSSK 86
Query: 93 NKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQ 152
++ K + D + +A+ + E K + + SRS
Sbjct: 87 RQEREKAKKKKKKKEKEKRLD---CSNWKSEAALSPPRKKREEEPKNRRDSADSRSSATS 143
Query: 153 VEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---NDSSR 209
K+ M+R + K E + PS P T A P + L C DS R
Sbjct: 144 SPKRPP-----MERSNSSSKSKA--ETPKTPS--SPLTPTFA-PSVCLLAPCYLTGDSVR 193
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
DK E+LA AL +A+++ D CD ++A +E ++++L + + + RS
Sbjct: 194 DKCVEMLAAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSR 246
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 247 ISNLKDPRNPGLRRNVLSGAISSGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTG 306
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TTD +CS+C ++ CTY QMQTRSADEPMTT+V C C RWK
Sbjct: 307 GTTTDLLQCSKCKKKNCTYNQMQTRSADEPMTTFVLCNECGHRWK 351
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
Query: 196 PKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKL 255
PK T I D R + RE+++NAL T + + P +E +F
Sbjct: 124 PKSTN-IGTTDDVRLRCREMISNALKGTTDAG----LPDGTVKPPEEFGDLIEEAIFSNF 178
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI 315
++ K + RS +FN+RD+KNP LR+ VL G + P + M+ +EMASDE + Q
Sbjct: 179 KSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIDPPKFAVMTADEMASDEIKNQRAAF 238
Query: 316 KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
++ + Q TD KC +C Q CTY Q+QTRSADEPM T+V C C RWKF
Sbjct: 239 VKQGIDASQLAHIQGTKTDLLKCGKCKQSNCTYNQIQTRSADEPMATFVLCNECGNRWKF 298
Query: 376 C 376
C
Sbjct: 299 C 299
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 97/171 (56%), Gaps = 9/171 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
++ R K RELL++AL + D C+ +A +E ++ + G + K +
Sbjct: 131 NAVRLKCRELLSSAL---------KCEDMPEGCNTDSLAAKIEESIYNEFGDTNNKYKNR 181
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP LR VL G + PER+ M+ EEMASD+ ++ + + ++A+ + Q
Sbjct: 182 VRSRVSNLKDSKNPALRINVLHGAIEPERIARMTAEEMASDDMKQLRQRLTKEAINDHQM 241
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C + CTY Q+QTRSADEPMTT+ C C RWKFC
Sbjct: 242 ATTGGTKTDLLKCGKCRKNNCTYNQVQTRSADEPMTTFCFCNECGHRWKFC 292
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 104/191 (54%), Gaps = 14/191 (7%)
Query: 187 KPSQ-GTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
+P Q T P++T + R+K R++L +L + E++ R+A
Sbjct: 170 RPFQKNTTFPPQMTDV-------REKCRQMLLKSLEPDLNSP------EISVLTRERLAA 216
Query: 246 SVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
+E ++ + RS +FN+RD+KNPDL++ VL GE+T RL TM+ EEMAS
Sbjct: 217 EIEQEIYSLFNNTGDRYCACVRSRVFNLRDKKNPDLKRSVLSGEITAIRLATMTSEEMAS 276
Query: 306 DERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVT 365
+ + ++A+ E Q E TD FKC +C ++ CTY Q QTRSADEPMTT+V
Sbjct: 277 EALKAARRKFTKEAIEEHQVAQEVGTPTDMFKCGKCHKKNCTYTQAQTRSADEPMTTFVY 336
Query: 366 CVNCSKRWKFC 376
C C RWKFC
Sbjct: 337 CRECGNRWKFC 347
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 21 IDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLL 79
+D V +G +D LK L++ P+T ++L T++G + L K ++ +Q+ A NL+
Sbjct: 48 LDKVVNGEKSEQSAMDILKILRATPMTVELLQKTRIGMTVNELRKKTTDRSLQVEAKNLI 107
Query: 80 DIWKKIV 86
WKK++
Sbjct: 108 RHWKKLI 114
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 13/170 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL---K 265
RD + L +AL+K + I+ V S+ES MF KL T EK K
Sbjct: 148 RDSVIRALYDALAKGSEHPPNSILHTVK---------SIESEMF-KLNNCTENEKAYKEK 197
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
YR I NI + N DL+ ++ +++PE LVT P+E+A + ++++E IK++ LF Q
Sbjct: 198 YRIIYSNIISKNNADLKNKIANNDISPEYLVTCDPKELAPEHLKQKLEEIKKQNLFNAQG 257
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 258 ATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 307
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 99/170 (58%), Gaps = 7/170 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R K RELL AL ++ D + I D +A +E +F++ + K +
Sbjct: 140 DCVRSKCRELLVVALQ---TDDDHKAI----RVDCEHLAAQIEEQIFQEFKSTDMKYKTR 192
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D+KNP+LR+ VL G ++P R+ M+ EEMAS E ++ E + ++++ E Q
Sbjct: 193 LRSRISNLKDQKNPELRRNVLCGNISPHRIACMTAEEMASAELKQMREALTKESIREHQL 252
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
TD F CS+C + CTY Q+QTRSADEPMTT+V C +C RWK
Sbjct: 253 SKVGGTETDMFICSKCHGKSCTYTQVQTRSADEPMTTFVLCNDCGNRWKL 302
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTG 260
I D R + RE++ NAL D C P +A +E +F ++
Sbjct: 128 INTTDDVRLRCREMITNALKGAGDLPD-------GICKSPEELADLIEESIFSSNKSTSA 180
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS +FN+RD+KNP LR+ VL G + P + M+ +EMASDE ++Q ++ +
Sbjct: 181 KYKNQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVMTADEMASDEVKKQRAAFVKQGI 240
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC +CG+ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 241 DASQLAQIQGTKTDLLKCGKCGKSDCTYNQIQTRSADEPMTTFVLCNACGNRWKFC 296
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 9/172 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDP-IRVAVSVESVMFEKLGRSTGAEKL 264
D+ R K RE+LA+AL +V E E C P + +E +F ++ + K
Sbjct: 129 DTVRLKCREMLAHAL-QVEGEQPE-------GCQPPEELGEELEEAIFAEIKNTDFRYKN 180
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP LR + G +T ERL M+PEEMASDE + + ++A+ + Q
Sbjct: 181 RVRSRVANLKDPKNPSLRANFVSGAITAERLAKMTPEEMASDEMKNLRDRFVKEAINDAQ 240
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 241 LATNQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVLCNECGNRWKFC 292
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 234 SDSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDM 282
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 283 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 342
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 343 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 396
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 108/201 (53%), Gaps = 22/201 (10%)
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV-- 235
EEK+A S SQ + + +T D+ R K RE+L AL + EV
Sbjct: 135 EEKRASS----SQTSFPSGGMT------DAVRLKCREMLTTALK----------MGEVPE 174
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
+P +A +E ++ + + K + RS + N++D KNP LR + G V+ ++L
Sbjct: 175 GCAEPEEMAAELEDAIYAEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQL 234
Query: 296 VTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRS 355
M+PEEMASDE ++ E ++A+ + Q TD KC +C +R CTY Q+QTRS
Sbjct: 235 AKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRS 294
Query: 356 ADEPMTTYVTCVNCSKRWKFC 376
ADEPMTT+V C C RWKFC
Sbjct: 295 ADEPMTTFVMCNECGNRWKFC 315
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R K RE+L AL E E +P +A +E ++ + + K +
Sbjct: 151 DAVRLKCREMLTTALK--MGEVPE------GCAEPEEMAAELEDAIYSEFKNTDMKYKNR 202
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP LR + G V+ ++L M+PEEMASDE ++ E ++A+ + Q
Sbjct: 203 IRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQL 262
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 263 ATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 104/174 (59%), Gaps = 13/174 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N+ RD++ L +AL+K + + I+ + ++++E M KL S+ EK
Sbjct: 142 NNKLRDQVIRALYDALAKDSEHPPKSIL---------QTSIAIEEEM-HKLNDSSIKEKE 191
Query: 265 ---KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
KYR I NI NPDL+ ++ G+++PE+LV P+++A + ++++E IK++ LF
Sbjct: 192 YKDKYRVIYSNIISRNNPDLKVKIANGDLSPEQLVNSDPKDLAPEHLKKKMEEIKKQNLF 251
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 252 NAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 305
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS RDK E+LA A+ KV + E ++ C+ ++A +E ++++L + + +
Sbjct: 118 DSVRDKCVEMLA-AVLKVDGDYKEFGVN----CE--QLASEIEDHIYQELKSTDMKYRNR 170
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N+RD +NP LR+ VL G + R+ M+ EEMASDE + + +A+ E Q
Sbjct: 171 VRSRISNLRDPRNPALRRSVLCGGIAASRIARMTAEEMASDELKELRNAMTLEAIREHQM 230
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 231 AKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 281
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 15/173 (8%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 299
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
+RD L+ + L+ ++ E + DE+ + VA VE+ + G K K R
Sbjct: 147 ARDACVRLMYDGLAYMS----EAMPDEI-----LLVAKQVEAAAYTNAGSVNDGYKAKMR 197
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++ + NP LRKRVL GEV +R VTM+ +EM SDER+ E +K + + E
Sbjct: 198 SLFQNLKSKSNPALRKRVLTGEVPAKRFVTMTHDEMKSDERRALDEKLKAENMNEAMVAQ 257
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A + +F+CS+C ++ +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 258 VEKAISKEFQCSKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRWKF 305
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 15/175 (8%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE+LA AL V ADEE + +E +++++ +
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEE-----------ELGSQIEEAIYQEIRNTDM 185
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 186 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 245
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 246 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKM 300
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 8/174 (4%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
I C D+ R K RE+L +AL + D + + C+ + A +E +++ + +
Sbjct: 133 ITC-DTVRSKCREMLTSAL-----QTDNDYVAIGVDCEEM--AAQIEEFIYQDVKNTDLK 184
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNPDLRK VL G +TPE++ M+ EEMAS+E + + + ++A+
Sbjct: 185 YKNRVRSRISNLKDSKNPDLRKNVLCGVITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 244
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C RWK
Sbjct: 245 EHQMAKTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKL 298
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV--IEETT 91
+D LK LKS P+T +L ST++G + L K E + +A +L+ WKK++ E+
Sbjct: 27 MDLLKELKSMPITLHLLQSTRIGMSVNALRKQSTDEDVIALAKSLIKAWKKLLDASEDKG 86
Query: 92 RNKKNGSTGDKSSVTTGVVKPDS 114
KK S SS +G K S
Sbjct: 87 NEKKRNSLPTSSSRESGDSKDQS 109
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 104/171 (60%), Gaps = 10/171 (5%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-K 263
N+ +RD L+ + LS +++E+ + ++ + A++VE+ F G T + K
Sbjct: 134 NNKTRDSCLGLMYDGLSFMSTESTKIVLTK---------AIAVEAAAFTSFGPETKEQYK 184
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
K RS+ N++++ NP LR+RVL G+VTP++ V M+ +E+ SDER+ + I+++ + +
Sbjct: 185 TKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNMTHDELKSDERRALDQKIQKENMDKA 244
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +C +CGQRK TY + QTRSADEPMT + TC+NC K WK
Sbjct: 245 MVAQAERSISSSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLNCGKSWK 295
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 171/399 (42%), Gaps = 83/399 (20%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVS---------RCVDALKRLKSFPVTYDVLVST 54
EL ++ D AK A + DG G P + ++AL L ++ ++L T
Sbjct: 76 ELKKVIDHAKAALE----DGQQGGAPGAAVTPLLGVRDDVLEALTVLDRVDMSRELLAKT 131
Query: 55 QVGKRLRPLTKHPREKIQIVASNLLDIWKKIVI-------EETTRNKKNGSTGDKSSVTT 107
++G + L HP +I+ + L+ WK + T+R NG
Sbjct: 132 RIGVSVGKLRTHPDSQIRSRCTQLVHKWKAGISGGGLAKENATSRPGPNGR--------- 182
Query: 108 GVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRG 167
G KP +G + T+ K +S+ N D G
Sbjct: 183 GQGKPPTGTLG--NDTANEKAHGLSS-------------------------NSSPRADEG 215
Query: 168 -EAVKVEKIIEEEKQA-PSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTS 225
V V++ E+ A P+ G D+ RD+ R L AL V
Sbjct: 216 LHGVPVDRAPEKASTAVEDYPGPASG--------------DAVRDRARGFLWRAL--VDG 259
Query: 226 EADEEIIDEVNACDPIRVAVSVESVMFEKL---GRSTGAEKLKYRSIMFNIRDEKNPDLR 282
+ + + RVA +E ++++ +ST ++ +++ +N D+KNPDL
Sbjct: 260 MQSRRDLGADRSGETARVAAEIEKALWQEYCVRRKSTKEYNMQLKTLKWNFADQKNPDLN 319
Query: 283 KRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE------ATATTDQF 336
+VL G TPE+L MS ++ASDE++R E K++++ CQ E + QF
Sbjct: 320 LKVLCGVYTPEQLAIMSSADLASDEKKRMRELQKKESMEACQSDWEMKKLMEGASEGGQF 379
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
C +C K Y+QMQTRS+DEPMTT+VTC+ C RWKF
Sbjct: 380 PCFKCRTTKTVYFQMQTRSSDEPMTTFVTCLECGNRWKF 418
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 169/350 (48%), Gaps = 43/350 (12%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S+ ++ +L +T++G + + KH +K + +A L+ WK+++ +
Sbjct: 27 LDLLKKLDSYQMSIQLLQTTRIGVAVNGIRKHCSDKEVVALAKILIKNWKQLLDSPGSPK 86
Query: 94 KKNGSTGDKSSVTTGVV-----KPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRS 148
K G +K V+ KP++G + + E K ++ S+S
Sbjct: 87 GKKGEKREKGKKKEKVLDCSDWKPEAG----------LSSPRRKGKEEPKNKRDSVNSKS 136
Query: 149 ETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---N 205
K+ +M R VK + R P I P + L C
Sbjct: 137 SITSSLKR-----PLMKRSNKVK------------TPRTPRSPLIFAPSICLLSPCYLTG 179
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS RDK E+L+ AL +A+++ + CD ++A +E ++++L + + +
Sbjct: 180 DSVRDKCVEMLSVAL-----KAEDDYKNYGVNCD--KMASEIEDHIYQELKSTDMKYRNR 232
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNP LR+ VL G ++ E + M EEMASDE + + ++A+ E Q
Sbjct: 233 VRSRISNLKDSKNPGLRRNVLSGAISTELIAKMMAEEMASDELRELRNAMTQEAIREHQM 292
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD +C +C ++ CTY Q+QT SADEPMTT+V C C RWKF
Sbjct: 293 AKTSGTNTDLLQCGKCKKKNCTYNQVQTLSADEPMTTFVLCNECGHRWKF 342
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 15/174 (8%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 202 SDSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDM 250
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 251 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 310
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 311 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 364
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
I C D+ R+K RE+L AL + D + I C+ ++ +E +++ + +
Sbjct: 199 ITC-DAVRNKCREMLTAAL-----QTDNDHIAIGTDCE--HLSAQIEEYIYQDVKNTDMK 250
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNPDLRK VL G +TPE++ M+ EEMAS+E + + + ++A+
Sbjct: 251 YKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 310
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C RWK
Sbjct: 311 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 363
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 24 VSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIW 82
+ +G P VD LK LKS P+T D+L ST++G + L K +++ +A +L+ W
Sbjct: 81 LKNGKPFQDGAVDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSW 140
Query: 83 KKIVIEETTRN--KKNGSTGDKSS 104
KK++ RN KK S KSS
Sbjct: 141 KKLLDASEERNDEKKKNSYLPKSS 164
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 13/174 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N RD + + +AL+K + + I+ + A +VE M KL G+EK
Sbjct: 131 NHKLRDMVIRAMYDALAKDSEHPPKSIL---------QTAKAVEEEM-HKLNNCDGSEKA 180
Query: 265 ---KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
KYR I NI + NPDL+ ++ G+V+P LV P+E+A + +R++E I ++ LF
Sbjct: 181 YKDKYRIIYSNIISKNNPDLKHKITSGDVSPFYLVNCDPKELAPEHLRRKLEEIAKQNLF 240
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 241 NAQGATVERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRWKF 294
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE--KLGRSTGAEKLKYR 267
DK+R+++ A ++ E + A +A+ +E M++ G + A K KYR
Sbjct: 141 DKLRDMVIRAFYDALAKESEHPPQSILA-----IAIDIEKHMWQLNDPGENEKAYKDKYR 195
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
I N+ + N DL+ ++ G++TPE LV P+E+A + ++++E I ++ LF Q
Sbjct: 196 VIYSNVISKNNRDLKHKITNGDITPEYLVNCDPKELAPEHLRKKLEEIAKQNLFNAQGAT 255
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F+C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 256 LERSVTDRFQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRWKF 303
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 9/171 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
++ R K RELL++AL + D + C+ +A +E ++ + G + K +
Sbjct: 152 NAVRLKCRELLSSAL---------KCEDMPDGCNVDGLAAKIEESIYNEFGDTNMKYKNR 202
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D +NP LR VL G + PER+ MS EEMASDE + + ++++ + Q
Sbjct: 203 VRSRVSNLKDSRNPALRLNVLHGAIDPERIARMSAEEMASDEMKELRQRFTKESINDHQM 262
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C + CTY Q+QTRSADEPMTT+ C C RWKFC
Sbjct: 263 AVTGGTKTDLLKCGKCRKNNCTYNQVQTRSADEPMTTFCYCNECGHRWKFC 313
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 98/175 (56%), Gaps = 15/175 (8%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE++A AL + ADEE + +E +++++ +
Sbjct: 151 SDSVRLKCREMIAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDM 199
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 200 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 259
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 260 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKM 314
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 97/172 (56%), Gaps = 9/172 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACD-PIRVAVSVESVMFEKLGRSTGAEKL 264
D+ R K RE+LA+A+ +V E E C P + +E +F + + K
Sbjct: 138 DAVRLKCREMLASAI-RVDGEPPE-------GCQTPEELGDELEEAIFSEFRNTDMKYKN 189
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP LR + G +T +RL M+PEEMASDE + + ++A+ + Q
Sbjct: 190 RVRSRVANLKDLKNPSLRSNYINGAITAQRLAKMTPEEMASDEMKNLRDRFVKEAINDAQ 249
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 250 LATNQGTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 301
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS R K RE+L A+ D P +A +E ++++ + K +
Sbjct: 136 DSVRLKCREMLCAAIKGDGVAVDGGGD-------PEYLAQMLEECIYKEFRNTDMKYKNR 188
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D +NP+LR L G+V+P RL M+ EEMASDE + + ++++ + Q
Sbjct: 189 VRSRVSNLKDARNPNLRLNFLCGQVSPARLSNMTSEEMASDEMKNIRQKFTKESINDAQL 248
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +CG+R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 249 ATVQGTQTDLLKCGKCGKRNCTYNQVQTRSADEPMTTFVLCNACGNRWKFC 299
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 104/182 (57%), Gaps = 13/182 (7%)
Query: 189 SQGTIATPKLTQLIKCN---DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
S+G + T K T IK N D RDK EL+ +AL+ + E+I+ A
Sbjct: 130 SKGELRTAK-TDGIKMNITGDKIRDKCVELIYDALASDSGAPSEQIMSR---------AK 179
Query: 246 SVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
S+ES + + +TG + K R+ N++D+ NP LR+ V+ GE+ ++ MS +EMAS
Sbjct: 180 SIESTVLAEFSGTTGEYRSKIRTFFVNLKDKNNPGLRESVISGELPVQKFCRMSSQEMAS 239
Query: 306 DERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVT 365
+ER+ I ++ LF+ E A TD F+C RC QRKC Y Q QTRSADEPMTT+VT
Sbjct: 240 EERKAADNRIIQENLFKALGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVT 299
Query: 366 CV 367
V
Sbjct: 300 YV 301
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 98/171 (57%), Gaps = 4/171 (2%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R++ +++L NAL + D D DP +A +E ++ + G S K +
Sbjct: 140 DVVRERCKQMLVNALKVAIPDLD----DGEELQDPEELAGIIEDCIYTEFGNSDLRYKNR 195
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D KNPDLR+ VL G + E++ +M+ EEMAS+ ++ + ++A+ + Q
Sbjct: 196 VRSRVSNLQDSKNPDLRRMVLRGTIPAEKIASMAAEEMASEAMKQMRQKFTKEAINDHQL 255
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ C +C ++ CTY QMQTRSADEPMTT+V C +C RWKFC
Sbjct: 256 AHTEGTRSALLTCGKCRKKNCTYNQMQTRSADEPMTTFVFCNDCGHRWKFC 306
>gi|452819596|gb|EME26652.1| transcription elongation factor S-II [Galdieria sulphuraria]
Length = 204
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 9/168 (5%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS-VESVMFEKLGRSTGAE-KLKY 266
RDK+R L L+ T E +E PI V V +E +F+ + TG + + ++
Sbjct: 43 RDKVRTLFYQVLT-TTEERKQE------KQKPIHVTVEEIEEELFKSCDKETGKDYQERF 95
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS+ N++D KN LR+ VL + P+ V M+P E+A+ E +++ E ++++++ E ++
Sbjct: 96 RSLYRNLKDAKNASLREAVLSRTILPKDFVVMTPHELANPELKKEREQLRKESIRESKKS 155
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ +++F+C +CG RKC+++QMQTRSADEPMTT+VTC +C RWK
Sbjct: 156 VDTQTFSEEFQCRKCGLRKCSFFQMQTRSADEPMTTFVTCHHCGNRWK 203
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 12/208 (5%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC---NDSSRDKIRELLANALSKVTSE 226
VE+ + +A S + PS T + L C DS RDK E+L+ AL +
Sbjct: 146 VERSNSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----K 200
Query: 227 ADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVL 286
AD++ D CD ++A +E ++++L + + + RS + N++D +NP LR+ VL
Sbjct: 201 ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVL 258
Query: 287 LGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKC 346
G ++ + M+ EEMASDE + + ++A+ E Q TTD F+CS+C ++ C
Sbjct: 259 SGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNC 318
Query: 347 TYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TY Q+QTRSADEPMTT+V C C RWK
Sbjct: 319 TYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|19074096|ref|NP_584702.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|19068738|emb|CAD25206.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|449329004|gb|AGE95279.1| transcription elongation factor sII [Encephalitozoon cuniculi]
Length = 257
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++ C+ A+ + E GR+ RS N++D+ NP L +RV G+++P R
Sbjct: 118 ISDCNNASAALLARQITIEIFGRNPSDIAKLIRSKCLNLKDKNNPALCRRVYNGDISPSR 177
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTR 354
V MS EEM S+ + + + E +L+ECQ + A TD FKCS+CG+RKC+Y Q+QTR
Sbjct: 178 YVDMSSEEMKSESLKNEEVKMIEVSLYECQIPTQ-KAETDIFKCSKCGERKCSYRQLQTR 236
Query: 355 SADEPMTTYVTCVNCSKRWKFC 376
S DEPMTT+VTC C +W+FC
Sbjct: 237 SGDEPMTTFVTC-ECGNKWRFC 257
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 75/113 (66%)
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
++ RS + N+RD KNP+LR L+G +TP RL M+ EEMASDE ++ E K++A+ +
Sbjct: 1 MQVRSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDA 60
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 61 QLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 113
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 79/111 (71%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS++ N+R++ NP+LR R+L E+ + VTM+ +E+A + ++++ ++ +K LF+ Q
Sbjct: 183 KMRSLIMNLRNKNNPELRARLLSREIKSSKFVTMTNQELAPEALKKELADLHQKNLFDAQ 242
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ A TD+F C +C +R+ +YYQMQTRSADEP+TT+ TC +C RWKF
Sbjct: 243 GAVQKRAITDRFVCGKCNKREVSYYQMQTRSADEPLTTFCTCESCGNRWKF 293
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 111/208 (53%), Gaps = 13/208 (6%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIATP-----KLTQLIKCNDSSRDKIRELLANALSKVTSE 226
+K+ E K P K S T +P L + DS RDK E+LA AL
Sbjct: 285 AKKLTAERKAKPDTPK-SPTTPTSPMSPGGALPPHLNTGDSVRDKCIEMLAAAL-----R 338
Query: 227 ADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVL 286
D + + CD + A +E +++++ + K + RS + N++D KNP LRK VL
Sbjct: 339 TDNDYKEFGTNCDSM--AAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVL 396
Query: 287 LGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKC 346
G + R+ +MS EEMASDE ++ + ++A+ E Q +TD +C +C ++ C
Sbjct: 397 AGTLALSRIASMSAEEMASDELKQLRNTLTQEAIREHQMAKTGGTSTDLLQCGKCKKKNC 456
Query: 347 TYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TY Q+QTRSADEPMTT+V C C RWK
Sbjct: 457 TYNQVQTRSADEPMTTFVLCNECGNRWK 484
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 186 RKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEA-DEEIIDEVNACDPIRVA 244
R + + P + K DS RDK+RE+L +L+KV SE D E+ V ACDP VA
Sbjct: 95 RDNREAAVKIPTHATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVA 154
Query: 245 VSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
VSVE+ MFE LG G +K KYRSI+FN+ D NPDLR++VLLGE++ ERLV M EEM
Sbjct: 155 VSVETAMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMG 214
Query: 305 S 305
S
Sbjct: 215 S 215
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFP--VTYDVLVSTQVGKR 59
++E +ELF+AA +AA S D PEVSR VDA+ RLK P + DV+ T +G+
Sbjct: 3 KREFMELFEAALRAAKSVKGD---ENSPEVSRFVDAMNRLKEAPKSLVCDVVCKTSMGQG 59
Query: 60 LRPLTKHPREKIQIVASNLLDIWKKIVI---EETTRNKKNGSTGDKSSVT---TGVVKPD 113
L H KI+ L D+W K E +R+ + + + T TG K D
Sbjct: 60 LEFFIDHKNPKIRSEGRILRDLWMKFFYASGREKSRDNREAAVKIPTHATMKKTGDSKRD 119
Query: 114 SGKIDKVQKTSAVKV 128
K+ ++ +TS KV
Sbjct: 120 --KVREILQTSLAKV 132
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 80/355 (22%)
Query: 24 VSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPRE-KIQIVASNLLDIW 82
S G + +D LK+L++ + +VL T++G + L K ++ ++ ++ L+ W
Sbjct: 18 TSEDGSGQEQALDLLKQLQTLNINLEVLTKTRIGMTVNALRKSSKDDEVISLSKTLIKNW 77
Query: 83 KKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKT 142
KK + +GS ++S +T KP K DK +K+S
Sbjct: 78 KKFL---------SGSNAKETS-STSTSKP---KRDKEEKSS------------------ 106
Query: 143 GSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLI 202
+ +K ++EK+ P+ PS
Sbjct: 107 ----------------------------REDKDRDKEKKLPNQFPPSSSNTT-------- 130
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGA 261
D+ R K RE+LA A+ T +E C P +A +E +F++ +
Sbjct: 131 ---DAVRLKCREMLAAAIRCDT--------EEFEGCASPEDLAEELEEAIFQEFKNTDMR 179
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LR +G + RL M+ EEMA+DE ++ E ++A+
Sbjct: 180 YKNRVRSRIANLKDVKNPNLRTNFRIGAIPASRLAVMTAEEMANDEIKQLRERFTKEAIN 239
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ Q TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 240 DAQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 294
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 9/172 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEKL 264
D+ R K RE+L NAL +V E E C P +A +E ++ + + K
Sbjct: 140 DAVRLKCREMLTNAL-RVDGEQPE-------GCQSPEELADELEEAIYVEFKNTDMKYKN 191
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP LR + G +T +RL M+PEEMASDE + + ++A+ + Q
Sbjct: 192 RVRSRVANLKDPKNPSLRSNFVSGAITAQRLAKMTPEEMASDEMKNLRDRFVKEAINDAQ 251
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 252 LATNQGTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTFVLCNECGHRWKFC 303
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 74/103 (71%)
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
+ K K RS++FN++D+ NP LR+ V+ GE++ +L +M P +MAS+ER+ Q + E+
Sbjct: 144 SNGYKNKMRSLIFNLKDKNNPGLREAVVSGEISSMKLCSMGPADMASEERKAQDRKLAEE 203
Query: 319 ALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
LF+ + G A TD F+C RCGQRKCTYYQMQTRSADEPMT
Sbjct: 204 NLFKARGAGPQQAETDAFRCGRCGQRKCTYYQMQTRSADEPMT 246
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 96/172 (55%), Gaps = 9/172 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACD-PIRVAVSVESVMFEKLGRSTGAEKL 264
D+ R K RE+LANAL +V E E C P + +E +F + + K
Sbjct: 152 DAVRLKCREMLANAL-RVDGEPPE-------GCQTPEELGEELEEAIFVEFKNTDMRYKN 203
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP LR + G +T +RL M+ EEMASDE + + ++A+ + Q
Sbjct: 204 RVRSRVANLKDPKNPSLRANFVSGAITAQRLAKMTSEEMASDEMKHLRDRFVKEAINDAQ 263
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 264 LATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGHRWKFC 315
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 9/173 (5%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + I + + +++++ +
Sbjct: 117 DSVRLKCREMLAAALRTGDDYVAIGADEEELGS-----QIEEDILFQVPIYQEIRNTDMK 171
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ +A+
Sbjct: 172 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTREAIR 231
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 232 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 284
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 12/174 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE---KLGRSTGAE 262
+S R K REL+++AL + D + CD +A +E + + G +
Sbjct: 91 NSVRLKCRELISSAL---------KCDDMPDGCDLDGLAAKIEEYILSWHCEFGDTNMKY 141
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D KNP+LR VL G + P+R+ M+ +EMASDE ++ + ++A+ +
Sbjct: 142 KNRVRSRVSNLKDSKNPNLRLNVLHGAIDPDRIARMTADEMASDEMKQMRQKFTKEAIND 201
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC +C + CTY Q+QTRSADEPMTT+ C C RWKFC
Sbjct: 202 HQMAVTGGTKTDLLKCGKCRKSNCTYNQVQTRSADEPMTTFCYCNECGHRWKFC 255
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 45/358 (12%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 4 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPK 63
Query: 94 KKNGSTGDKSSVTTGV----------VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTG 143
+ G DK+ G+ + P K + K V S+A + +
Sbjct: 64 GEKGEERDKAKKEKGLDCSDWKAETGLSPPRKKRGEEPKDRRDSVGSKSSASSSPKRPSM 123
Query: 144 SVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIK 203
S S T + E +T G + P+ PS +A LT
Sbjct: 124 ERSNSSTSKAESPKTPGSPL------------------TPTF-APSVCLLAPCYLT---- 160
Query: 204 CNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV-----SVESVMFEKLGRS 258
DS RDK E+L+ AL +A+++ D CD + + + S ++++L +
Sbjct: 161 -GDSVRDKCVEMLSAAL-----KAEDDYKDYGVNCDKMASEIEDHILELRSHIYQELKST 214
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
+ + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++
Sbjct: 215 DMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQE 274
Query: 319 ALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK C
Sbjct: 275 AIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKVC 332
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAE 262
N RD + + L +AL K ++E+ I+ ++A VE M F +
Sbjct: 144 NHKLRDMVVKALYDALVKDSTESSSLIL---------KLATEVELEMKKFSDPDVNEKQY 194
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ KYR + N+ + NP+L+ R++ G+V+P RLVT P+E+A + ++++E I +K L+
Sbjct: 195 RDKYRVVYSNLISKNNPELKFRIVGGDVSPARLVTCDPKELAPESLKKELEEIAKKNLYN 254
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 255 AQGATVQRSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 307
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 23/342 (6%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S+ ++ +L +T++G + + KH +K + +A L+ WK+++ + +
Sbjct: 27 LDLLKKLGSYQMSIRLLQTTKIGVAVNGVRKHCSDKEVVAMAKVLIKNWKQLL--DCPGS 84
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
K G ++ V V D + +A+ + E K K S+S
Sbjct: 85 PKKGKAKERRKVKKKVKVLDCSAW---KPEAALSSPRRKGREEPKKRKESVDSKSSATSS 141
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K+ + R + K + + PS+ PS ++ LT D RDK
Sbjct: 142 LKRPST-----KRSNSSKSKAKTPKTPSGPSMLAPSPCLLSPRYLT-----GDCIRDKCV 191
Query: 214 ELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNI 273
E+L+ AL +A+++ D CD ++A +E ++ +L + + + RS + N+
Sbjct: 192 EMLSVAL-----KAEDDYKDYGVNCD--KMASEIEDHIYRELKSTDMKYRNRVRSRISNL 244
Query: 274 RDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATT 333
+D KNP LR+ VL G ++ + M EEMASDE + + ++A+ E Q + T
Sbjct: 245 KDPKNPGLRRNVLSGAISTGLIAKMMAEEMASDELKELRNAMTQEAIREHQMAKTSGTNT 304
Query: 334 DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
D +CS+C ++ CTY Q+QT SADEPMTT+V C C RWKF
Sbjct: 305 DLLQCSKCKKKNCTYNQVQTLSADEPMTTFVLCNECGHRWKF 346
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
DS RDK E+L+ AL K+ + E ++ CD ++A +E ++++L + +
Sbjct: 198 GDSVRDKCVEMLSAAL-KMDGDYKEYGVN----CD--KMASEIEDHIYQELKGTDMKYRN 250
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + +A+ E Q
Sbjct: 251 RVRSRISNLKDPRNPSLRRNVLCGAISTSLIARMTAEEMASDELKELRSAMTLEAIREHQ 310
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK C
Sbjct: 311 MAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKVC 362
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 161/332 (48%), Gaps = 25/332 (7%)
Query: 35 VDALKRLKSFPV-TYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRN 93
+ LK+L++ V T D+L S++ G + L H + +A ++ W+ V E T+
Sbjct: 26 ISLLKKLQAEVVPTEDLLRSSKAGVAVGKLRTHATPSVSSLAKEIVKKWRDAV--EETKK 83
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
K+ + GD+ + +GK K + A+ S ++T GS++ + +
Sbjct: 84 KRKRAEGDEGKDVKKEKEEGNGKRVKAESMCALSPAAESGSDTHIHFAAGSLAATPSAST 143
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
+ D VK +P VR+P TI + + T +D D +R
Sbjct: 144 PASASTPD--------VKA--------TSPPVRQP-LSTIDSSRTTPRTAKSDGVADSLR 186
Query: 214 ELLANALSKVTSEADEEII---DEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSI 269
+ S V S D+ +I D + A+ +E + + STG + + K RS+
Sbjct: 187 ADSSEGGS-VDSVRDKCVIMIYDALALDSTAERAIGIERAANKAMNFSTGNDYRAKMRSL 245
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
N++D+ NP LR ++LG V+ E++ +MS +EMAS+ + E I LF+ + G
Sbjct: 246 FLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESVRMLKEKIASDNLFKAKAVGVT 305
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
A TD FKC RC QRKCTYYQMQTRSADEPMT
Sbjct: 306 QAETDAFKCGRCHQRKCTYYQMQTRSADEPMT 337
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEV-NACDPIRVAVSVESV-MFEKLGRSTGAEK 263
D+ R K RE+LANAL I EV + C + ++ + + K
Sbjct: 162 DAVRLKCREMLANALK----------IGEVPDGCAEPEEMAAELEEAIYMEFKNTDMKYK 211
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N++D KNP LR + G V+ ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 212 NRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDA 271
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 272 QLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 324
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEV-NACDPIRVAVSVESV-MFEKLGRSTGAEK 263
D+ R K RE+LANAL I EV + C + ++ + + K
Sbjct: 162 DAVRLKCREMLANALK----------IGEVPDGCAEPEEMAAELEEAIYMEFKNTDMKYK 211
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N++D KNP LR + G V+ ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 212 NRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDA 271
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 272 QLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 324
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL V ADEE + ++ + +++++ +
Sbjct: 98 DSVRLKCREMLAAALRTGDDYVAIGADEEELGS-------QIEEDILLPIYQEIRNTDMK 150
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 151 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 210
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 211 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 263
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 7/170 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
DS RDK E+L+ AL +A+++ D CD ++A +E ++++L + +
Sbjct: 389 GDSVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRN 441
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 442 RVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQ 501
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 502 MAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 551
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 14/176 (7%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEK-- 263
D+ R+K RE+L AL +AD++ + C+ I A +E + S K
Sbjct: 114 DAVRNKCREMLTAAL-----QADDDYVAIGADCEHI--AAQIEEYILTNGASSRAYVKNT 166
Query: 264 -LKY----RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
+KY RS + N++D KNP+L+K VL G +TPE++ M+ EEMAS+E + + + ++
Sbjct: 167 DMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE 226
Query: 319 ALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
A+ E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C RWK
Sbjct: 227 AIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 282
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D LK LKS P+T D+L ST++G + L K E++ +A +L+ WKK++
Sbjct: 4 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLL 56
>gi|303388862|ref|XP_003072664.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
gi|303301806|gb|ADM11304.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
Length = 256
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++ C A+ + + E GRS RS N++D+ NP L +RV G+++P R
Sbjct: 117 ISDCCNRSAALLAKQITVEIFGRSPSDIAKLVRSKCLNLKDKNNPVLCRRVYDGDISPSR 176
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTR 354
V M+ EEM S+ + + + E +L+ECQ + A TD FKCS+CG+RKC+Y Q+QTR
Sbjct: 177 YVDMTSEEMKSENLKNEEVKMIEDSLYECQIPTQK-AETDMFKCSKCGERKCSYRQLQTR 235
Query: 355 SADEPMTTYVTCVNCSKRWKFC 376
S DEPMTT+VTC C +W+FC
Sbjct: 236 SGDEPMTTFVTC-ECGNKWRFC 256
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 195 TPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEK 254
T K+ + NDS RD +L+ + L+ ++ +EI+ +A VE+ +
Sbjct: 133 TDKVKYQVTGNDS-RDACVKLMYDGLAFMSEAMPDEIL---------VIAKQVEAAAYTN 182
Query: 255 LGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIEN 314
G A K K RS+ N++++ NP LRKRV G+++ +R V M+ +EM SDER+ + +
Sbjct: 183 AGSINDAYKAKMRSLFQNLKNKTNPQLRKRVFSGDISAKRFVVMTHDEMKSDERRAEDKI 242
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
++++ + + A + +F+C +C Q+ +Y Q QTRSADEPMTT+ C+NC RWK
Sbjct: 243 LEQENINQAMVAQVEKAISKEFQCGKCKQKMVSYSQAQTRSADEPMTTFCECMNCGNRWK 302
Query: 375 F 375
F
Sbjct: 303 F 303
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KL 264
+ +RD +++ NAL+ + ++ + ++ VA VE + K T A K
Sbjct: 140 NQTRDNCLKMMYNALALMVEDSPKSVMA---------VAREVELAAYNKYQPETSAPYKE 190
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS+ N++++ NP LRKRVL GE+ PE+ VTMS EE+ S ER+ + E ++++ + +
Sbjct: 191 RMRSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMSSEELMSAERRAEAERLEKENMNKAM 250
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + C +CGQ+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 251 VAQAERSISTSLTCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 301
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 8/173 (4%)
Query: 202 IKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
I C D+ R K RE+L ++L + D + + C+ +A +E +++ + +
Sbjct: 39 ITC-DTVRSKCREMLTSSL-----QTDNDYVAIGADCE--EMAAQIEEFIYQDVKNTDLK 90
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNPDLRK VL G +TPE + M+ EEMAS+E + + + ++A+
Sbjct: 91 YKNRVRSHISNLKDSKNPDLRKNVLCGVITPEEIAVMTSEEMASNELKEIWKAMTKEAIR 150
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C WK
Sbjct: 151 EHQMAKTGGTQTDLFTCRKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNHWK 203
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 173/385 (44%), Gaps = 61/385 (15%)
Query: 12 AKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKI 71
+K D+ + + EV + + L LK + D+L T++G + TK E I
Sbjct: 22 SKLECDNEGVKEIDDATIEVIK--NDLILLKDVEINKDILKQTKIGVTVNKFTKINNESI 79
Query: 72 QIVASNLLDIWKKIVIEETTRN-------KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTS 124
+ ++ L+D WK I I+E N K+ S + S+ +P+
Sbjct: 80 KNISKELVDKWKNIAIKEKNSNRNSENIKKRKHSETENSNNNVNEKEPE----------- 128
Query: 125 AVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDS-----VMDRGEAVKVEKIIEEE 179
++K ST+ ++ + ++ E KE NG + + E K+ + EE
Sbjct: 129 ---LKKKSTSCSLNNNNSTHIN-------EDKENNGKNNTKSYAYNSNENRKINIVDIEE 178
Query: 180 KQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACD 239
Q + D RDK ++ L A + + IID+ N D
Sbjct: 179 IQKWNYSGKYHH--------------DVLRDKAKQFLFKAFIAGSHDNLLHIIDQ-NKLD 223
Query: 240 PIRVAVSVESVMFEKLGRSTGAEK---LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLV 296
I ++E+ +F+ ++K ++ +SI FN+ D+KNP+ +++ ++ L
Sbjct: 224 NI--IYNIENELFKIFIERKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLA 281
Query: 297 TMSPEEMASDERQRQIENIKEKALFECQRGGEATATT------DQFKCSRCGQRKCTYYQ 350
TM+ ++MASDE++ + + +++L CQ + +F+C +C Y Q
Sbjct: 282 TMNSQDMASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQ 341
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKF 375
+QTRS+DEPMTT+VTC+ C+ RWKF
Sbjct: 342 LQTRSSDEPMTTFVTCLKCNNRWKF 366
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 81/126 (64%)
Query: 251 MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR 310
+F +G + K + RS + N++D KNPDLR+ VL G +TP+++ M+ EEMASDE +
Sbjct: 5 IFRDVGNTDMKYKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASDELKE 64
Query: 311 QIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCS 370
+ + ++A+ E Q TD F CS+C ++ CTY Q+QTRS+DEPMTT+V C C
Sbjct: 65 IRKAMTKEAIREHQMARTGGTQTDLFTCSKCRKKNCTYTQVQTRSSDEPMTTFVVCNECG 124
Query: 371 KRWKFC 376
RWK C
Sbjct: 125 NRWKVC 130
>gi|401825902|ref|XP_003887045.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
gi|392998203|gb|AFM98064.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
Length = 253
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++ C A + + E GR+ RS N++D+ NP L +RV GE++P R
Sbjct: 114 ISDCSNRHAAFLAKQITTEIFGRNPSDIAKLIRSKCLNLKDKNNPVLCRRVYDGEISPSR 173
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTR 354
V M+ EEM S+ + + + E +L+ECQ + A TD FKC++CG+RKC+Y Q+QTR
Sbjct: 174 YVDMTSEEMKSESLRNEEVKMIEVSLYECQIPTQK-AETDMFKCNKCGERKCSYRQLQTR 232
Query: 355 SADEPMTTYVTCVNCSKRWKFC 376
S DEPMTT+VTC C +W+FC
Sbjct: 233 SGDEPMTTFVTC-ECGNKWRFC 253
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 96/174 (55%), Gaps = 17/174 (9%)
Query: 205 NDSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+DS R K RE+LA AL + ADEE + D + V ++
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEDILCVNTDMKY----------- 185
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP+LRK VL G ++P+ M+ EEMASDE + +N+ ++A+
Sbjct: 186 --KNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAI 243
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 244 REHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 297
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 198 LTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGR 257
++ L+ D+ RD + LA AL + DE I E + +A S+E+ ++ KL
Sbjct: 135 ISTLVHTGDAHRDSCIKALAKALDPTVT--DETQISEYF----VSLAQSIEASIY-KLHN 187
Query: 258 STGAEKLK--YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI 315
S + K K RS MFN++ +N D RK VL G + PE++ M+ EEMA+ E + + +
Sbjct: 188 SEVSPKYKTAVRSKMFNLK--QNEDFRKAVLNGSIPPEKVAVMTSEEMATKELNAERKKL 245
Query: 316 KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+A+ + Q + TDQ +C +CG+R +Y+Q+QTRS+DEPMTT+VTC C WK
Sbjct: 246 TTEAMNDAQMPAPKMSKTDQLRCGKCGKRDASYFQLQTRSSDEPMTTFVTCNVCGHNWK 304
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 159/344 (46%), Gaps = 45/344 (13%)
Query: 23 GVSSGGPEVSRCVDALKRLK-SFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDI 81
++G PE V LK+LK S T ++L T+ G + L HPR++I +A L+
Sbjct: 16 ATTTGKPE--DGVTILKQLKQSVVATEELLRETKAGLAIGKLRSHPRKEIADLAKELVKK 73
Query: 82 WKKIVIEETTRNKKNGSTGDKSSVTT--GVVKPDSGKIDKVQKTSAVKVEKVSTAETVKV 139
WK+ V E + K G T S T G P + K ++ S ++V
Sbjct: 74 WKEAV-EAGKKVKAAGGTPSTPSTATPSGKPTPPPAATSQPTKPQPSPIDPPSRKQSVST 132
Query: 140 EKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLT 199
+ + S+ K+ + + +AVK+E S+G
Sbjct: 133 TAASTPTSSKPTPTLKQPQSNVVRTVKNDAVKIE---------------SKG-------- 169
Query: 200 QLIKCNDSSRDKIRELLANALSKVTS--EADEEIIDEVNACDPIRVAVSVESVMFEKLGR 257
D +RDK ELL +A++ + E+ II ++ ++E ++++
Sbjct: 170 ------DKTRDKCMELLYDAMASDSGARESTHLII--------LKRVYAIEYQVYKEFDG 215
Query: 258 STGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKE 317
T K R + N++D+KNP LR+ V+ G+++ E+ V M+PEEMAS+ER++Q + E
Sbjct: 216 VTKEYSTKMRRLFNNLKDKKNPGLREAVVSGDISAEKFVKMTPEEMASEERKQQNSALNE 275
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
+ GE A TD F+C RC K Y Q QTRSADEPMT
Sbjct: 276 ANVHAALGAGEPEAETDAFQCGRCKNFKTRYRQAQTRSADEPMT 319
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Query: 235 VNACDPIRVAVS----VESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+N+ +P R +S VE+ F LG T + + K RS+ N++++ NP LR RVL G+
Sbjct: 158 LNSVEPPRTVLSKASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPSLRVRVLNGD 217
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYY 349
VTPER V MS +E+ S+E+Q + I+++ + + + + +C +CGQRK TY
Sbjct: 218 VTPERFVRMSHDELRSEEQQERDRRIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 277
Query: 350 QMQTRSADEPMTTYVTCVNCSKRWK 374
+ QTRSADEPMT + TC+NC K WK
Sbjct: 278 EAQTRSADEPMTLFCTCMNCGKSWK 302
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 13/170 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL---K 265
RD + L +AL+K + I+ ++++ +E+ M K S EK K
Sbjct: 163 RDSVIRALYDALAKESQHPPNSIL---------KLSIEIEAEM-NKSYDSIANEKQYKEK 212
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
YR I N+ + N DL+ ++ G++TP LV P+E+A + +++IE I+EK LF Q
Sbjct: 213 YRIIYSNLISKNNSDLKFKITNGDITPVHLVNCDPKELAPEPLRKKIEEIREKNLFNAQG 272
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 273 ATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRWKF 322
>gi|403220912|dbj|BAM39045.1| transcription elongation factor [Theileria orientalis strain
Shintoku]
Length = 319
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 155/352 (44%), Gaps = 77/352 (21%)
Query: 34 CVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRN 93
C++AL+ LK V +VL +T++G L L+K +
Sbjct: 35 CLEALESLK---VDREVLQTTRIGTSLTKLSKSLENHCK--------------------- 70
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
D SS T +++ ++ V T+A K +K + + S +R E V
Sbjct: 71 -------DSSSKITCIIERWKSQLRSVNATNATKRQKTA-------DGADSTTRKEKASV 116
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPK-LTQLIKCNDSSRDKI 212
E+N S D E K EEE P+ P + K L L +C +D
Sbjct: 117 S--ESNIPSFSDTREDSK-----EEELDLPAYSGPVHSEVVRDKALRYLFRCFLVGQDFG 169
Query: 213 RELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEK---LKYRSI 269
EL +++NA + +E+ +++ + A+K L+ + I
Sbjct: 170 PEL-----------------NKLNA-----LVYEIENALYDHYVVNKNAQKEYNLQLKCI 207
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
FN +D KN +V G + LVTMS +MASDE++ Q I E++L CQ
Sbjct: 208 SFNFKDIKNTFFNYKVYSGAIPVSELVTMSSLQMASDEKKMQRSVILEQSLEACQSDWAI 267
Query: 330 ------TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ QFKC +C R+ TYYQ+QTRS+DEPMTT+VTC+NC RW+F
Sbjct: 268 KNIFLNQKSKGQFKCGKCNSRQTTYYQLQTRSSDEPMTTFVTCLNCKNRWRF 319
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 118/242 (48%), Gaps = 37/242 (15%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC---NDSSRDKIRELLANAL------ 220
VE+ + +A S R PS T P L L C DS RDK E+L+ AL
Sbjct: 34 VERSNSSKSKAESPRTPSSPLTPTFAPSLCLLAPCYLTGDSVRDKCVEMLSAALKAEDDY 93
Query: 221 -------SKVTSEADEEIIDEVNACD-------PIRV--------AVSVESVMFEKLGRS 258
K+ SE ++ I++ + P V A S+ + R
Sbjct: 94 KDYGVNCDKMASEIEDHILEPLETSSSPASLSRPANVERSLRPDTAQCARSLAQRRYSRE 153
Query: 259 TGAEKLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIEN 314
+ +KYR S + N++D +NP LR++VL G + + M+ EEMASDE +
Sbjct: 154 LSSTDMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAGLIAKMTAEEMASDELRELRNA 213
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 214 MTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 273
Query: 375 FC 376
C
Sbjct: 274 RC 275
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E
Sbjct: 4 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIRE 63
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 64 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 117
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 170/379 (44%), Gaps = 60/379 (15%)
Query: 17 DSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVAS 76
D+ I+ + + EV + + L LK + D+L T++G + TK E I+ ++
Sbjct: 27 DNEGIEEIDNATIEVIK--NDLILLKDVEINKDILKQTKIGVTVNKFTKINNESIKNISK 84
Query: 77 NLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAET 136
L+D WK I I+E NK D I K + +
Sbjct: 85 ELVDKWKNIAIKEKNTNK------------------DLENIKKRKHNETENSNNNVNEKG 126
Query: 137 VKVEKTGSVSRSE----TVQVEKKETNGDS-----VMDRGEAVKVEKIIEEEKQAPSVRK 187
+++K G+ + T E KE NG + + E K+ + EE Q +
Sbjct: 127 PELKKKGTSNSLNNSNSTHINEDKENNGKNSTKSYAYNSNENRKINIVDIEEMQKWNYNG 186
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADE--EIIDEVNACDPIRVAV 245
K +D+ RDK ++ L A +T D +ID N D I
Sbjct: 187 ---------------KYHDALRDKAKQFLFKAF--ITGSHDNLLHLIDR-NKLDNI--IY 226
Query: 246 SVESVMFEKLGRSTGAEK---LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
++E+ +++ ++K ++ +SI FN+ D+KNP+ +++ ++ L TM+ ++
Sbjct: 227 NIENELYKIFIEKKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQD 286
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATT------DQFKCSRCGQRKCTYYQMQTRSA 356
MASDE++ + + +++L CQ + +F+C +C Y Q+QTRS+
Sbjct: 287 MASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSS 346
Query: 357 DEPMTTYVTCVNCSKRWKF 375
DEPMTT+VTC+ C+ RWKF
Sbjct: 347 DEPMTTFVTCLKCNNRWKF 365
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N RD + +AL+K + + I+ +A+ E + A K
Sbjct: 129 NHKLRDMVIRAFYDALAKESEHPPQSILTTA-------IAIEKELNKVNNCELNEKAYKD 181
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
KYR + N+ + NPDL+ R+ G+V+PE LV P+E+A + +++ E I + LF Q
Sbjct: 182 KYRVVYANVISKNNPDLKHRITGGDVSPEYLVNCDPKELAPEHLKKKNEEIARQNLFNAQ 241
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 242 GATLERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRWKF 292
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAE 262
N RD + L +AL+K + ++D A S+E M + A
Sbjct: 134 NHKLRDMVIRALYDALAKESEHPPSSVLDS---------AKSIEEEMNKLNNCDENEKAY 184
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K KYR I NI + NPDL+ ++ G+VT + LV+ P+E+A + ++++E I ++ L
Sbjct: 185 KDKYRIIYSNIISKNNPDLKHKITNGDVTSQYLVSCDPKELAPEHLKKKLEEIAKQNLHN 244
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 245 AQGATIQRSITDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 297
>gi|399215957|emb|CCF72645.1| unnamed protein product [Babesia microti strain RI]
Length = 300
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 104/178 (58%), Gaps = 13/178 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG-RSTGAEK 263
ND SR+K +L A K + + ++V + + ++E +FE + A++
Sbjct: 129 NDPSRNKALSILYKAFLKGFPQNSPQPSNKVAS----ELIYNLEQHVFESFHEKRLYAQQ 184
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+K SI FN++D N L + +GE+TP++L TM+P++MAS++ +R+ E + ++++ C
Sbjct: 185 IK--SIRFNLQDNNNTQLNYNLHVGEITPQQLATMAPQDMASEKLKRKREMVLKESMLAC 242
Query: 324 QRGGE------ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q ++ T QF C +C Q K Y Q+QTRS+DEPMTT+VTC+ C RWKF
Sbjct: 243 QSDWAVKNILLSSKTPGQFTCFKCKQSKTVYTQVQTRSSDEPMTTFVTCLVCQNRWKF 300
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 29/207 (14%)
Query: 188 PSQGTIATPKL----------------TQLIKCNDSSRDKIRELLANALSKVTSEADEEI 231
PS T+++PK + ND RD + + L +AL+K + I
Sbjct: 110 PSDATVSSPKKQTKFTSTKPRNSKNDGVNTVVYNDKLRDSVVKALYDALAKESEHPPASI 169
Query: 232 IDEVNACDPIRVAVSVESVMFEKLGRSTGAE---KLKYRSIMFNIRDEKNPDLRKRVLLG 288
+ V S+E+ M+ KL + E K KYR I NI + NPDL+ ++
Sbjct: 170 LHTVK---------SIENEMY-KLNNPSINERQYKEKYRIIYSNIISKNNPDLKNKITNN 219
Query: 289 EVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTY 348
++TP+ LV P+E+A + ++++E IK++ LF Q + TD+F C +C ++K +Y
Sbjct: 220 DITPDYLVNCDPKELAPEHLKKKLEEIKKQNLFNAQGATIERSVTDRFTCGKCKEKKVSY 279
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWKF 375
YQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 280 YQLQTRSADEPLTTFCTCEACGNRWKF 306
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 171/385 (44%), Gaps = 57/385 (14%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASN--LLDIWKKIVIEETTR 92
+D LK L + +T +L +T++G + + KH ++ ++VAS L+ WK+++
Sbjct: 27 LDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDE-EVVASAKILIKNWKRLLESSAPP 85
Query: 93 NKKNGSTGDKSSVTTG----VVKPDSG--------------------KIDKVQKTSAVKV 128
K+ + G+K V P+ G K K K+S+
Sbjct: 86 KKEKDTDGEKEKKEKEKRLDVPSPNEGANPHPAKHPKNPTEKHREKHKERKPSKSSSHAA 145
Query: 129 EKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVR-- 186
E+ S RS T +K +G +R ++ +P R
Sbjct: 146 PTKGQPTDPNPEREPSAGRSPTAASKKSPLDGKK--ERRDSADSRSSATSSSSSPQKRPS 203
Query: 187 ----KPSQGTIATPK----------LTQLIKC---NDSSRDKIRELLANALSKVTSEADE 229
S+G TP+ + L C DS RDK E+L AL ++ E D
Sbjct: 204 GERANSSKGKAETPRTPSSPSFSPSICLLPPCYLTGDSVRDKCVEMLTAAL-RMDGEWDG 262
Query: 230 EIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGE 289
++ E+ + +F++L + + + RS + N++D KNP+LR+ VL G
Sbjct: 263 -MVREI-------XFPXLAPHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGA 314
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYY 349
+ P + M+ EEMASDE + + ++A+ E Q TD F+C +C ++ CTY
Sbjct: 315 IAPALIARMTAEEMASDELKELRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYN 374
Query: 350 QMQTRSADEPMTTYVTCVNCSKRWK 374
Q+QTRSADEPMTT+V C C RWK
Sbjct: 375 QVQTRSADEPMTTFVLCNECGNRWK 399
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 10/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG-AEKLKY 266
+RD L+ + L ++E+ + ++ R A VE+ F+ G T A + K
Sbjct: 138 ARDSCVGLMYDGLCLGSTESSQAVL---------RKATDVEAAAFKAFGPETKEAYRTKI 188
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS+ N++++ N LR RVL EVTPER V M+ EE+ SDER+ + I+++ + + G
Sbjct: 189 RSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAMVG 248
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +C +CGQRK TY + QTRSADEPMT + TC+ C K W+
Sbjct: 249 QPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 73/114 (64%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D KNP LR + G V+ ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 206 KNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAIND 265
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 266 AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 319
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 67/103 (65%)
Query: 274 RDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATT 333
+D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q T
Sbjct: 176 KDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQT 235
Query: 334 DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
D F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 236 DLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 278
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK--Y 266
RD + L +AL+K + ++ + AV +E M T ++ K Y
Sbjct: 149 RDSVVRALYDALAKDSEHPPSSVL---------QTAVDIEKEMNALYDHVTSEKQYKEKY 199
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R + NI NPDL+ ++ G++TP+ +V P+E+A + +++IE I ++ LF Q
Sbjct: 200 RIVYSNIISRNNPDLKFKITNGDLTPQFVVQCDPKELAPEHLRQKIEEITKQNLFNAQGA 259
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F+C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 260 TIERSVTDRFQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 156/354 (44%), Gaps = 60/354 (16%)
Query: 23 GVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIW 82
V SG P S + L+ L++F T D+L +++G + L ++ K+ ++S L++ W
Sbjct: 16 AVDSGDPP-STLLQLLQPLRTFTATEDLLRHSKIGIAVNRLRQNKDPKVAQLSSQLINKW 74
Query: 83 KKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKT 142
K V ++ K GS + GV KT VK E +T+
Sbjct: 75 KADVKTKS----KTGSPAPAAKGINGVANGRDATSSPAPKTDGVKKEPSATS-------- 122
Query: 143 GSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLI 202
+ +R V EK+ D V T L
Sbjct: 123 -NPARKSKVPPEKRTFTADEVN----------------------------------TDLT 147
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG-A 261
D++R+ L+ N L+ ++ E+ +E++ A SVE+ F T A
Sbjct: 148 --GDTTRNGCIGLIYNGLAYMSEESPDEVL---------VAARSVEAAAFSVHNNETSSA 196
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K+K RS+ N++ + N LR+ V G++ P+R VTM+ +E+ + E++ Q ++++ +
Sbjct: 197 YKMKMRSLFQNLKMKGNATLRRDVFNGKIEPKRFVTMTSDELKNAEKRAQDAALEKENMK 256
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A + C++C Q + Y Q QTRSADEPMTT+ C NC RWKF
Sbjct: 257 ASMTAQEEKAISTTMTCNKCKQSRVAYTQAQTRSADEPMTTFCECTNCGNRWKF 310
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAEKLKY 266
RD++ + L + L+K + + I+ A ++ES M + A K +Y
Sbjct: 149 RDQVLKALYDVLAKESEHPPQSIL---------HTAKAIESEMNKVNNCDTNEAAYKARY 199
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R I N+ + NPDL+ ++ G++TPE L T +++A +++IE I ++ L+ Q
Sbjct: 200 RIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGA 259
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 260 TIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP+LRK VL G VTP+ + TM+ EEMASDE + + ++A+ E Q
Sbjct: 10 RIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQ 69
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD +C +C ++ C+Y Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 70 MAKTGGTQTDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNECGNRWKFC 121
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAEKLKY 266
RD++ + L + L+K + + I+ A ++ES M + A K +Y
Sbjct: 149 RDQVLKALYDVLAKESEHPPQSIL---------HTAKAIESEMNKVNNCDTNEAAYKARY 199
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R I N+ + NPDL+ ++ G++TPE L T +++A +++IE I ++ L+ Q
Sbjct: 200 RIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGA 259
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 260 TIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
+RD L+ + L+ ++ E + D++ I VA VE+ + G A K K R
Sbjct: 142 ARDGCVRLMYDGLAFMS----EALPDDI-----ITVAKHVEAAAYGNAGSVNDAYKQKMR 192
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++++ NP LRK VL G++ P++ V MS +EM SD R+ + E ++++ + +
Sbjct: 193 SLFQNLKNKSNPALRKDVLSGKIQPKKFVVMSHDEMKSDSRRAEDEKLEKENMNQAMVAQ 252
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + +F+C +C ++ +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 253 VEKSISKEFQCGKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRWKF 300
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS RDK E+L+ AL +AD++ D CD ++A +E + ++L + + +
Sbjct: 187 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIHQELKSTDMKYRNR 239
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 240 VRSRISNLKDPRNPGLRRNVLSGAISTGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 299
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TTD F+C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 300 AKTGGTTTDLFQCKKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC 350
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 27/177 (15%)
Query: 209 RDKIRELLANALSK----------VTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRS 258
RD++ + L + L+K T++A E+ ++++N CD S
Sbjct: 149 RDQVLKALYDVLAKDSEHPPQSILHTAKAIEDEMNKINNCD-----------------SS 191
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
K +YR I NI + NPDL+ ++ G++TPE L T +++A +++IE I ++
Sbjct: 192 EALYKARYRIIYSNIISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEISKQ 251
Query: 319 ALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
L+ Q + TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 252 NLYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAEKLKY 266
RD++ + L + L+K + + I+ A ++ES M + A K +Y
Sbjct: 82 RDQVLKALYDVLAKESEHPPQSIL---------HTAKAIESEMNKVNNCDTNEAAYKARY 132
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R I N+ + NPDL+ ++ G++TPE L T +++A +++IE I ++ L+ Q
Sbjct: 133 RIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGA 192
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 193 TIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 241
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 73/112 (65%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D KNP+LRK VL G ++P+ M+ EEMASDE + +N+ ++A+ E
Sbjct: 250 KNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAIRE 309
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
Q TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 310 HQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 361
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 157/350 (44%), Gaps = 74/350 (21%)
Query: 35 VDALKRLKSFPV-TYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEETTRN 93
V LK+L++ V T D+L S++ G + L H + +A ++ W+ V E ++
Sbjct: 26 VSLLKKLQAEVVPTEDLLRSSKAGVAIGKLRTHTTPSVSNLAKEIVKKWRDAV--EESKK 83
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
K+ + GD+ GK V+
Sbjct: 84 KRKRAEGDE------------GK---------------------------------DVKK 98
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLT-------QLIKCND 206
EK+E NG V + E++ V PS P+ +++TP + Q + D
Sbjct: 99 EKEEGNGKRV--KAESIHVYFAAGSSAVTPSASTPA--SVSTPDVKATSPPARQPLSTID 154
Query: 207 SSRDKIR----ELLANALSKVTSEADE----------EIIDEVNACDPIRVAVSVESVMF 252
SSR R + + ++L +SE I D + A+ +E
Sbjct: 155 SSRTTPRTAKSDGMTDSLKADSSEGGSVDSVRDKCVVMIYDALALDSTAERAIGIERAAN 214
Query: 253 EKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
+ + STG + + K RS+ N++D+ NP LR ++LG ++ E++ +MS +EMAS+ +
Sbjct: 215 KSMNFSTGNDYRAKMRSLFLNLKDKGNPALRNEIVLGYISTEKVASMSKDEMASESVRML 274
Query: 312 IENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
E I LF+ + G A TD FKC RC QRKCTYYQMQTRSADEPMT
Sbjct: 275 KEKIASDNLFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMT 324
>gi|453082690|gb|EMF10737.1| transcription elongation factor S-II [Mycosphaerella populorum
SO2202]
Length = 312
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 172/374 (45%), Gaps = 71/374 (18%)
Query: 3 QELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRP 62
QEL+ L KA + SG P S ++ LK L S+ T D+L +++G +
Sbjct: 8 QELMHLQKQIGKA--------LESGDPP-STLLELLKPLDSWRATEDLLRVSRIGIAVTK 58
Query: 63 LTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQK 122
L ++ +K+ AS L++ WK+ E + + KK G GD + VK +G
Sbjct: 59 LRQNKDQKVAETASKLVNRWKQ---EVSAKKKKAG--GDSPAPPAAGVKSGTG------- 106
Query: 123 TSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQA 182
TGS + + V+ E K+ S +D
Sbjct: 107 ----------------ASATGSPA-TPPVKTELKKEQRKSTVD----------------- 132
Query: 183 PSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIR 242
PS+ T T K+ + D RD +L+ + ++ ++ E+ + + D
Sbjct: 133 -----PSKRTTITDKIDHSV-TGDKVRDGCLKLMYDGIAFMSEESPDAVFD--------- 177
Query: 243 VAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
VA VE FE + T + K K RS+ N++ + N LR+ V ++ +RLVTM+ E
Sbjct: 178 VARRVEVAAFEHYRQETSNDYKTKMRSLFQNLKMKDNKLLRRDVFSQKIDAKRLVTMTSE 237
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
++ S++R+++ E +KE+ + EA A + F C++C + K +Y Q QTRSADEP+T
Sbjct: 238 DLKSEDRRKEDEAMKEENMRVAMTPQEAKAISTTFTCAKCKESKVSYSQAQTRSADEPLT 297
Query: 362 TYVTCVNCSKRWKF 375
T+ C C RWKF
Sbjct: 298 TFCECTVCGHRWKF 311
>gi|396081166|gb|AFN82784.1| transcription elongation factor S-II [Encephalitozoon romaleae
SJ-2008]
Length = 252
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS N++D+ NP L + V GE++P R V M+ EEM S+ + + + E +L+ECQ
Sbjct: 145 RSKCLNLKDKNNPVLCRMVYDGEISPSRYVDMTSEEMKSESLRNEEVKMIEVSLYECQIP 204
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ A TD FKC+RCG+RKC+Y Q+QTRS DEPMTT+VTC C +W+FC
Sbjct: 205 TQK-AETDMFKCNRCGERKCSYRQLQTRSGDEPMTTFVTC-ECGNKWRFC 252
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Query: 235 VNACDPIRVAVS----VESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+N+ +P R +S VE+ F LG T + + K RS+ N++++ NP LR RVL G+
Sbjct: 158 LNSVEPPRTVLSKASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLNGD 217
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYY 349
VTPE+ V MS +E+ S E+Q + I+++ + + + + +C +CGQRK TY
Sbjct: 218 VTPEQFVRMSHDELRSAEQQERDRKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYT 277
Query: 350 QMQTRSADEPMTTYVTCVNCSKRWK 374
+ QTRSADEPMT + TC+NC K WK
Sbjct: 278 EAQTRSADEPMTLFCTCMNCGKSWK 302
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 153/342 (44%), Gaps = 82/342 (23%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQI-VASNLLDIWKKIVIEETTRN 93
+D L LK +T ++L T+VG + + K +++ I +A +L+ WK+++
Sbjct: 29 LDLLTNLKDLKMTLEILQKTRVGYHVNNVRKKADKEVVINLAKSLIKDWKRLL------- 81
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
PDS K + KT + +++K S +
Sbjct: 82 ------------------PDSKKNEAKDKTDSRQMDKDSQD-----------------LI 106
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
++ E N ++ EEK +V + K Q++ + +RD R
Sbjct: 107 QQSEIN-------------PSLMVEEKDNTTVHQSHNN----DKDMQVLSSGNPTRDLSR 149
Query: 214 ELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNI 273
+LL ALS+ D + A+ F++L K + RS + N+
Sbjct: 150 KLLIGALSR----------------DGLNKAI------FKELKGPNMKYKNRVRSRISNL 187
Query: 274 RDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATT 333
+D KNP+L ++VL G +TPE++ M+ EEMASDE ++ + ++ + + Q T
Sbjct: 188 KDSKNPNLCQKVLSGIITPEQIAKMTAEEMASDEMKKLRQGYAKEGIRDAQMAVTQGTKT 247
Query: 334 DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
D C +C ++ C+Y QMQTRSADEPMTT+V C C RWK
Sbjct: 248 DLLTCGKCHKKNCSYNQMQTRSADEPMTTFVFCHECGHRWKL 289
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D KNP LR + G VT ++L M+PEEMASDE ++ E ++A+ +
Sbjct: 33 KNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAIND 92
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q TD KC++C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 93 AQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 146
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAEKLKY 266
RD++ + L + L+K + + I+ A ++ES M + A K +Y
Sbjct: 19 RDQVLKALYDVLAKESEHPPQSIL---------HTAKAIESEMNKVNNCDTNEAAYKARY 69
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R I N+ + NPDL+ ++ G++TPE L T +++A +++IE I ++ L+ Q
Sbjct: 70 RIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGA 129
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 130 TIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 178
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 107/175 (61%), Gaps = 16/175 (9%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF--EKLGRSTG--- 260
+ +R+ + + L N L + SE ++ +++A +E+ +F EK S+
Sbjct: 76 NRTRNGVIQALYNGLC-IDSEHPPNVL--------LKLAKEIEAEVFHAEKFDTSSNTKY 126
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
A++L RS+ N+R + NP+LR ++ G++ P+ + MSP EMA + ++++E IK+K L
Sbjct: 127 AQRL--RSLTSNLRQKNNPELRNKINNGDLLPKVFINMSPREMAPESLKKELEEIKKKNL 184
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
F Q + A TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC NC RWKF
Sbjct: 185 FNAQGATQERAVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCENCGNRWKF 239
>gi|406865033|gb|EKD18076.1| transcription elongation factor S-II [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 301
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
SRD LL N L+ +++E I+ +R A+ VE F+ T + K R
Sbjct: 142 SRDACIGLLYNGLAFMSTEPSSTIM--------VR-AIEVEKAAFDAFKGDTPEYRSKLR 192
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++ N +L V+ GE+ PE+ V MS EE+ S ER+++ E +++ + + Q
Sbjct: 193 SLFQNLKAISNRELAPAVMSGEIPPEKFVVMSHEELKSSERRKEDEKLQKDNMKKAQVPM 252
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D KC +CGQ+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 253 AEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 300
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 15/202 (7%)
Query: 177 EEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVN 236
E KQ + K ++ TI T + ND RD++ + L +AL+K + + I++ V
Sbjct: 113 EANKQDKYITKKTRNTINDCVDTAIY--NDDLRDRVIKALYDALAKESEHPPQAILNTVK 170
Query: 237 ACDPIRVAVSVESVMFEKLGRSTGAEKL---KYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
+ + L S EK +YR I N+ + NPDL+ ++ GEVT E
Sbjct: 171 DIE----------LQMHNLHNSETDEKAYRERYRIIYSNVISKNNPDLKHKITNGEVTAE 220
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
L S +++A + +++++ I ++ LF Q + TD+F C +C ++K +YYQ+QT
Sbjct: 221 FLSKCSSKDLAPEYLKQKMDEISKQNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQT 280
Query: 354 RSADEPMTTYVTCVNCSKRWKF 375
RSADEP+TT+ TC C RWKF
Sbjct: 281 RSADEPLTTFCTCEACGNRWKF 302
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 244 AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
A +VE+ F LG T + + K RS+ N++++ NP LR RVL EVTPE+ V MS +E
Sbjct: 172 ASAVEAAAFNALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKMSHDE 231
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
+ SDE++ Q I+++ + + + + +C +CGQRK TY + QTRSADEPMT
Sbjct: 232 LKSDEQREQERRIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTL 291
Query: 363 YVTCVNCSKRWK 374
+ TC+NC K W+
Sbjct: 292 FCTCMNCGKSWR 303
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 161/368 (43%), Gaps = 75/368 (20%)
Query: 9 FDAAKKAADSAAIDGVSSGGPEVSRCVDALKRL-KSFPVTYDVLVSTQVGKRLRPLTKHP 67
DA + + A+ ++ + ++ LK L K T D+L ST++G + L +H
Sbjct: 1 MDAKEIEFKAKALTKAATSSEPPANIINILKELQKGVRPTEDLLRSTRIGIVVNKLKQHK 60
Query: 68 REKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVK 127
+ + ++S ++ W+ E + K NGS S T P +G
Sbjct: 61 AQDVARLSSEIVSKWR----SEVNKQKSNGSPNPHRSST-----PRTG------------ 99
Query: 128 VEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRK 187
TA G R TV EK+ D V
Sbjct: 100 -----TASPAPASTPGD--RKSTVPPEKRSWKADGV------------------------ 128
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
T T N+ RD L+ + LS +++E + ++ + A++V
Sbjct: 129 ---DTNVT---------NNKVRDSCLGLMYDGLSFMSTELPKVVLAK---------AIAV 167
Query: 248 ESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
E+ F G T + K K RS+ N++++ NP LR+RVL EVTPE+ V M+ EE+ SD
Sbjct: 168 EAAAFTSFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEELKSD 227
Query: 307 ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTC 366
ER+ E I ++ + + + + +C +CGQRK TY + QTRSADEPMT + TC
Sbjct: 228 ERRALDEKIHKENMDKAMVAQAERSISSSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTC 287
Query: 367 VNCSKRWK 374
+NC K WK
Sbjct: 288 LNCGKSWK 295
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG-RSTGAEKLKY 266
+RD L+ + L ++E+ + ++ R A VE+ F+ G S + K
Sbjct: 138 ARDSCIGLMYDGLCLGSTESSQAVL---------RKAAEVEAAAFKAFGPESKEVYRTKM 188
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS+ N+++ N LR RVL EVTPER V M+ EE+ SDER+ + I+++ + + G
Sbjct: 189 RSLFQNLKNTSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAMVG 248
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +C +CGQRK TY + QTRSADEPMT + TC+ C K W+
Sbjct: 249 QPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG-AEKLKY 266
+RD L+ + L ++E+ + ++ R A VE+ F+ G T + K
Sbjct: 138 ARDSCLGLMYDGLCLGSTESPQAVL---------RKATEVEAAAFKAFGPETKEVYRSKM 188
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS+ N++++ N LR RVL EVTPER V M+ EE+ SDER+ + I+++ + + G
Sbjct: 189 RSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAMVG 248
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +C +CGQRK TY + QTRSADEPMT + TC+ C K W+
Sbjct: 249 QPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 19/179 (10%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R K+REL A + E+D D ++ +ES M+E G +
Sbjct: 126 DGKRLKVRELFEKAFADWKGESD---------VDRKDLSARIESAMYEHFGGANEQYLNH 176
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
+S+ FN+ D KNPD R +V+ G++ E + +S +MA ++ Q + KE +F+ +
Sbjct: 177 AKSVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQMAGKDKIEQKKANKEDKIFQDKM 236
Query: 326 ---GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT-------YVTCVNCSKRWK 374
G A +D F+C +C Q++ T+YQ QTRSADEPMT ++TC NC W+
Sbjct: 237 FITAGNLGAESDMFQCRKCKQKRTTFYQKQTRSADEPMTAELPLLQVFITCKNCGHEWR 295
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 97/175 (55%), Gaps = 9/175 (5%)
Query: 201 LIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
L + +RD +L N L+ +E+ EE++ R+A+ VE+ F T
Sbjct: 129 LKRTGHQARDGCIGVLYNGLAYRATESVEEVV---------RLAMEVEAAAFRVFKGDTP 179
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
+ K R +M +++ + NP L KRV G +TP+ V M+ E+ASD ++ + E ++++ +
Sbjct: 180 EYRQKIRGLMTSLKRKDNPALGKRVRSGAITPDTFVKMTDVELASDAQRAEDEKLQQENM 239
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ Q + +D KC +CGQ+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 240 KKAQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 294
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 87/152 (57%), Gaps = 17/152 (11%)
Query: 224 TSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRK 283
T++A E +++VN CD + A K +YR I N+ + NPDL+
Sbjct: 174 TAKAIESEMNKVNNCD-----------------TNEAAYKARYRIIYSNVISKNNPDLKH 216
Query: 284 RVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQ 343
++ G++TPE L T +++A +++IE I ++ L+ Q + TD+F C +C +
Sbjct: 217 KIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGATIERSVTDRFTCGKCKE 276
Query: 344 RKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 277 KKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 308
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG-RSTGAEK 263
N +RD L+ + L ++E+ + ++ R A VE+ F+ G + +
Sbjct: 135 NVKARDSCIGLMYDGLCLGSTESPQAVL---------RKATEVEAAAFKAFGPENKEVYR 185
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
K RS+ N++++ N LR RVL EVTPER V M+ EE+ SDER+ + I+++ + +
Sbjct: 186 TKMRSLFQNLKNKSNLSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKA 245
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
G + + +C +CGQRK TY + QTRSADEPMT + TC+ C K W+
Sbjct: 246 MVGQPERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 296
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 166/372 (44%), Gaps = 47/372 (12%)
Query: 17 DSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVAS 76
D+ I+ EV + + L LK + D+L T++G + TK E I+ ++
Sbjct: 27 DNEVIEEFDDATLEVIK--NDLILLKDVEINKDILKQTKIGVTVNKFTKINNESIKNISK 84
Query: 77 NLLDIWKKIVIEETTRNKK----NGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVS 132
L+D WK I I+E NK D++ V ++ K K + ++ S
Sbjct: 85 ELVDKWKTIAIKEKNSNKNLENIKKRKHDEAENANDNVNEKGPELKK--KIAPTNLDNNS 142
Query: 133 TAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGT 192
T E +++S + E K+ + EE Q + G
Sbjct: 143 THINEDKENNTIITKS-------------YAQNSNENKKINIVNIEEMQHWNY----SGK 185
Query: 193 IATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMF 252
I +D RDK ++ L A + + +ID N D I ++E+ ++
Sbjct: 186 IH----------HDVLRDKAKQFLFKAFIVGSHDNLLHLIDR-NKLDNI--IYNIENELY 232
Query: 253 EKLGRSTGAEK---LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
+ ++K ++ +SI FN+ D+KNP+ +++ ++ L TM+ ++MASDE++
Sbjct: 233 KIFIEKKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKK 292
Query: 310 RQIENIKEKALFECQRGGEATATT------DQFKCSRCGQRKCTYYQMQTRSADEPMTTY 363
+ + +++L CQ + +F+C +C Y Q+QTRS+DEPMTT+
Sbjct: 293 NERQKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSDEPMTTF 352
Query: 364 VTCVNCSKRWKF 375
VTC+ C+ RWKF
Sbjct: 353 VTCLKCNNRWKF 364
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 37/233 (15%)
Query: 171 KVEKIIEEEKQ-------APSVRKPSQGTIATPK----LTQLIKCN-------------- 205
K +K++E EKQ +P+ P+Q + P + Q K N
Sbjct: 78 KWKKLVEAEKQGKIKKQSSPAAPSPTQASAPKPSSSNAMNQPFKGNPELRRAKTDGCDTK 137
Query: 206 ---DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
D +RD EL+ N L+ ++ +++ + AV+VE + T
Sbjct: 138 RTGDETRDSCIELIYNGLAYRSTAPINDVLTK---------AVAVEYAAYIHFKGVTKEY 188
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++ + N L V+ G++TPER V M+ EE+ SDE++++ + ++++ + +
Sbjct: 189 REKLRSLFSNLKVKSNRQLGINVMEGKITPERFVVMTHEELKSDEQRKKEDALQQENMKK 248
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + +D KC +CGQ+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 249 AQVPMAEKSISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 301
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 89/167 (53%), Gaps = 12/167 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
R K RE+LA AL C DP +A +E ++ L K + R
Sbjct: 6 RIKCREMLATALKSGNMPP---------GCGDPDDMAAKLEDAIYGDLNGCKVKYKNRIR 56
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S + N+RD KNP+LR++ LLG++TPE L M+PEEMASD+ ++ + + ++ Q
Sbjct: 57 SRLANLRDPKNPELRQKFLLGQITPEELSKMTPEEMASDDMKQMRQKYVQDSINAAQMAK 116
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TDQFKC RC +R C+ Q+ R DEP+ T+V C C RWK
Sbjct: 117 VQGTKTDQFKCERCDKRNCS--QLHIRDGDEPIITFVICDECGNRWK 161
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Query: 241 IRVAVSVESVMFEKLGRSTG-AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
++ A VE+ F G T + + K RS+ N++ + N LR RVL GEVTP+R V+M+
Sbjct: 162 LQKATEVEAAAFNTYGPETKESYRTKIRSLYQNLKQKSNLSLRTRVLTGEVTPDRFVSMT 221
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
EE+ SDER+ + I+++ + + G + + +C +CGQRK TY + QTRSADEP
Sbjct: 222 HEELKSDERREEDRKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYTEAQTRSADEP 281
Query: 360 MTTYVTCVNCSKRWK 374
MT + TC+ C K W+
Sbjct: 282 MTLFCTCLACGKSWR 296
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 12/178 (6%)
Query: 200 QLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRST 259
+L + + RD+ L+ N L+ ++E+ +++I AV+VE +F +
Sbjct: 132 ELKRTSSGVRDRCIGLIYNGLAYRSTESPDDVIAR---------AVAVEHAVFIEFKEDE 182
Query: 260 G-AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS-DERQRQIENIKE 317
G K K RS+ N++ + N DL KRV+ G+++PE+ M+ EE+ S D+R+++IE KE
Sbjct: 183 GEGYKKKIRSLFANLKTKSNKDLGKRVMSGDISPEKFAKMTDEELKSEDQRKKEIELEKE 242
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ Q + +D +C RC +K +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 243 N-MKRAQVPMAEKSISDSLECGRCKMKKVSYTQAQTRSADEPMTTFCECMNCGHRWKF 299
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAEKLKY 266
RD++ + L + L+K + + I+ A ++ES M + A K +Y
Sbjct: 13 RDQVLKALYDVLAKESEHPPQSIL---------HTAKAIESEMNKVNNCDTNEAAYKARY 63
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R I N+ + NPDL+ ++ G++TPE L T +++A +++IE I ++ L+ Q
Sbjct: 64 RIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGA 123
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSAD P+TT+ TC C RWKF
Sbjct: 124 TIERSVTDRFTCGKCKEKKVSYYQLQTRSADHPLTTFCTCEACGNRWKF 172
>gi|169780530|ref|XP_001824729.1| transcription elongation factor S-II [Aspergillus oryzae RIB40]
gi|238505302|ref|XP_002383880.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|83773469|dbj|BAE63596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689994|gb|EED46344.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|391872022|gb|EIT81165.1| transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein [Aspergillus oryzae 3.042]
Length = 304
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 97/167 (58%), Gaps = 10/167 (5%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYR 267
RD L+ + L ++EA ++ + +A VE+ ++ LG T + + K R
Sbjct: 146 RDSCIGLMYDGLCLNSTEAPRNVLSKASA---------VEAAAYKSLGPETKEQYRTKIR 196
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++++ NP LR RVL +VTP++ V MS +E+ SDE++ + I+++ + +
Sbjct: 197 SLFQNLKNKSNPSLRIRVLSNDVTPDQFVRMSHDELRSDEQREKDAKIQKENMDKAMVAQ 256
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +C +CGQRK TY + QTRSADEPMT + TC+NC K WK
Sbjct: 257 AERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLNCGKSWK 303
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 107/189 (56%), Gaps = 13/189 (6%)
Query: 179 EKQAPSVRKPSQGTI-ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIID 233
E Q PS ++P + +TP++T + C D+ R K RE+L AL ++ D I
Sbjct: 106 EAQDPSRKRPELPRMPSTPRITTFPPVPVTC-DAVRTKCREMLTAALQ---TDHDHVAIG 161
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
C +A +E +F +G + K + RS + N++D KNP LR++VL G +TP+
Sbjct: 162 ADCEC----LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQ 217
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
++ M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+QT
Sbjct: 218 QIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQT 277
Query: 354 RSADEPMTT 362
RS+DEPMTT
Sbjct: 278 RSSDEPMTT 286
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D L+ LK+ PVT +L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 28 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLL 80
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 244 AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
A +VE+ F LG T + + K RS+ N++++ NP LR RVL EVTPE+ V MS +E
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKMSHDE 231
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
+ S E++ Q I+++ + + + + +C +CGQRK TY + QTRSADEPMT
Sbjct: 232 LKSAEQREQERKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTL 291
Query: 363 YVTCVNCSKRWK 374
+ TC+NC K W+
Sbjct: 292 FCTCMNCGKSWR 303
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 75/112 (66%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D KNP+LR+ VL G ++P+R+ +MS EEMAS E ++ E + ++++ E
Sbjct: 13 KTRLRSRISNLKDHKNPELRRNVLCGNISPQRIASMSAEEMASAELKQIREALTKESIRE 72
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
Q A TD F C+ C + CTY Q+Q RSADEPMTT+V C +C RWK
Sbjct: 73 HQLSKVGGAETDMFICNNCHGKNCTYTQVQIRSADEPMTTFVLCNSCGNRWK 124
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 12/177 (6%)
Query: 200 QLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRST 259
+L + + RD+ L+ N L+ ++E+ +++I AV+VE +F +
Sbjct: 132 ELKRTSSGVRDRCIGLIYNGLAYRSTESSDDVIAR---------AVAVEHAVFVEFKEDE 182
Query: 260 G-AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS-DERQRQIENIKE 317
G K K RS+ N++ + N DL KRV+ G++ PE+ M+ EE+ S D+R+++IE KE
Sbjct: 183 GEGYKKKIRSLFANLKTKSNKDLGKRVMSGDILPEKFAKMTDEELKSEDQRKKEIELEKE 242
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ Q + +D +CSRC +K +Y Q QTRSADEPMTT+ C+NC RWK
Sbjct: 243 N-MKRAQVPMAEKSISDSLECSRCKMKKVSYTQAQTRSADEPMTTFCECMNCGHRWK 298
>gi|358387656|gb|EHK25250.1| hypothetical protein TRIVIDRAFT_81951 [Trichoderma virens Gv29-8]
Length = 304
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 104/168 (61%), Gaps = 11/168 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYR 267
R++ L+ N L+ ++E++ ++I + AV+VE+ F L GAE K K R
Sbjct: 146 RNQCIGLIYNGLAYRSTESETDVIAK---------AVAVENAAFT-LFNGEGAEYKKKIR 195
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++ + N DL KRV+ G++TP R VTM+ E++ S+++++ + ++++ + + Q
Sbjct: 196 SLFSNLKSKTNRDLGKRVMSGDITPSRFVTMTDEDLKSEDQKKMEKELEKENMKKAQVPM 255
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D +C +C ++K +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 256 AEKSISDSLECGKCKKKKVSYTQAQTRSADEPMTTFCECMNCGNRWKF 303
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 72/114 (63%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D +NP LR++VL G + PE++ M+ EEMASD + + ++A+ E
Sbjct: 25 KTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRLKELRRELTKEAIRE 84
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
Q T KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 85 AQMSTTGGTKTSLLKCGKCKKRNCTYNQVQTRSADEPMTTFVFCNECGNRWKFC 138
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 47/238 (19%)
Query: 171 KVEKIIEEEKQ-------APSVRKPSQGTIATPK----LTQLIKCN-------------- 205
K +K++E EKQ +P+ P+Q P + Q K N
Sbjct: 78 KWKKLVEAEKQGKIKKQSSPAAPSPTQAPAPKPSSSNAMNQPFKGNPELRRAKSDGCDTK 137
Query: 206 ---DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
D +RD EL+ N L+ ++ + D + AV+VE F T
Sbjct: 138 RTGDETRDSCIELIYNGLAYRST---------ASVTDVLAKAVAVEHAAFSHYKGVTKEY 188
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR-----QIENIKE 317
+ K RS+ N++ + N L V+ G++ PER V M+ EE+ S+E+++ Q+EN+K+
Sbjct: 189 REKLRSLFSNLKVKSNRQLGVNVMEGKIAPERFVVMTHEELKSEEQRKKEDALQLENMKK 248
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ ++ + +D KC +CGQ+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 249 AQVPMAEK-----SISDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 301
>gi|440635961|gb|ELR05880.1| transcription elongation factor S-II [Geomyces destructans
20631-21]
Length = 301
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
+RD LL N L+ ++ + ++I + A+ VE F K T + K R
Sbjct: 142 TRDNCVGLLYNGLAFMSKTSPTKVILK---------AMEVEKAAFTKYKGDTPEYRAKMR 192
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N+++++N +L RVL GE+ ++ V M+ +E+ S ER+++ + +++ + Q
Sbjct: 193 SLFQNLKNKQNKELGPRVLSGEIPADKFVIMTHDELKSAERKKEDDELQKDNMKRAQVPM 252
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D KC RCGQ+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 253 AERSISDALKCGRCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 300
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
+RD L+ N L+ E +I + A++VE F+ G T K K R
Sbjct: 142 TRDACIGLMYNGLAFKCEEPPTHVIIK---------AMAVEQAAFDHFGGETKEYKEKLR 192
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++ N LRKRV+ G++ P R V M+ EE+ S+E +++ + ++ + + + Q
Sbjct: 193 SLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHEELKSEEMKKKDDALELENMKKAQVPM 252
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D C +CGQ+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 253 AEKSISDALTCGKCGQKKVSYSQAQTRSADEPMTTFCECQVCGHRWKF 300
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
Query: 244 AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
A +VE+ F LG T + + K RS+ N++++ NP LR RVL +VTPE+ V M+ +E
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRTRVLANDVTPEQFVKMTYDE 231
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
+ S E++ Q I+++ + + + + +C +CGQRK TY + QTRSADEPMT
Sbjct: 232 LKSAEQREQDRKIQKENMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTL 291
Query: 363 YVTCVNCSKRWK 374
+ TC+NC K W+
Sbjct: 292 FCTCMNCGKSWR 303
>gi|402469030|gb|EJW04098.1| transcription elongation factor S-II [Edhazardia aedis USNM 41457]
Length = 305
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 9/147 (6%)
Query: 233 DEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM----FNIRDEKNPDLRKRVLLG 288
+ + CD + A+ + ++ ++L R+ +K+K R ++ N+ ++ NP+L + V G
Sbjct: 164 NHIKECDFEQAAIVAKKIV-DELVRT---DKIKDRELVASKKLNLSNKANPELCQNVYNG 219
Query: 289 EVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTY 348
++PER + M+ EEM S++ +++ E +K+ L + Q + A T FKCSRC Q K TY
Sbjct: 220 TISPERYIAMTIEEMKSEDLKKREEKMKQDQLMDSQLP-KLQADTTMFKCSRCKQSKTTY 278
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWKF 375
YQ+QTRSADEPMT Y+TC C +WKF
Sbjct: 279 YQLQTRSADEPMTNYITCCVCGHKWKF 305
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 101/175 (57%), Gaps = 10/175 (5%)
Query: 201 LIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+ + + +RD +L N L+ +E+ EE++ A+ VE+ F + + T
Sbjct: 128 IARTGNKARDGSIGVLYNGLAYRATESIEEVLQR---------AMEVEAAAF-AVYKDTP 177
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
+ K R +M +++ + NP+L +RVL GE+TPE+ V M+ +E+AS+ ++ + ++ + +
Sbjct: 178 EYRSKIRGLMTSLKRKDNPELGRRVLGGEITPEKFVVMTDDELASEAQRARDRELERENM 237
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ Q + +D +C++C Q+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 238 LKAQVPMAQKSISDSLQCNKCKQKKVSYSQAQTRSADEPMTTFCECTVCGHRWKF 292
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAEKLKY 266
RD++ + L + L+K + + I+ A ++ES M + A K +Y
Sbjct: 18 RDQVLKALYDVLAKESEHPPQSIL---------HTAKAIESEMNKVNNCDTNEAAYKARY 68
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R I N+ + NPDL+ ++ G++TPE L T +++A +++IE I ++ L+ Q
Sbjct: 69 RIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGA 128
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD+F C +C ++K +YYQ+QTRSA P+TT+ TC C RWKF
Sbjct: 129 TIERSVTDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRWKF 177
>gi|300708584|ref|XP_002996468.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
gi|239605773|gb|EEQ82797.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
Length = 166
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS FN++D+ NP + K V G + P+ + MS E+M S + + Q E++L++ Q
Sbjct: 59 RSKCFNLKDKNNPRICKEVYEGTIKPDEYILMSNEDMKSKDLKEQERKAYEESLYDIQMP 118
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
E A TD FKCS CGQRK +Y Q+QTRSADEPMTT+VTCV C +WKFC
Sbjct: 119 -EIQAETDMFKCSTCGQRKSSYRQLQTRSADEPMTTFVTCV-CGHKWKFC 166
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 30/174 (17%)
Query: 201 LIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+ K +DS R+K RE+LANAL + DE E+
Sbjct: 107 VTKTHDSVREKCREMLANAL-----KTDEFKNTEMKY----------------------- 138
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP LR++VL G+V+ E++ M+ EEMAS E + +++ ++A+
Sbjct: 139 --KTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAI 196
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ Q TD KC +C +R TY Q+QTRSADEPMTT+ C C RWK
Sbjct: 197 RDAQMATTGGTQTDLLKCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGNRWK 250
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 30/174 (17%)
Query: 201 LIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+ K +DS R+K RE+LANAL + DE E+
Sbjct: 356 VTKTHDSVREKCREMLANAL-----KTDEFKNTEMKY----------------------- 387
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K + RS + N++D KNP LR++VL G+V+ E++ M+ EEMAS E + +++ ++A+
Sbjct: 388 --KTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAI 445
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ Q TD KC +C +R TY Q+QTRSADEPMTT+ C C RWK
Sbjct: 446 RDAQMATTGGTQTDLLKCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGNRWK 499
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D LK LK P+T D+L T++G + L K E++ +A +L+ WKK++
Sbjct: 5 LDILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLL 57
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
+D LK LK P+T D+L T++G + L K E++ +A +L+ WKK++
Sbjct: 254 LDILKSLKELPMTLDILQKTRIGMSVNNLRKSSNSEEVNSLAKSLIKSWKKLL 306
>gi|4217|emb|CAA24928.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 128
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 74/116 (63%)
Query: 260 GAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
A K +YR I N+ + NPDL+ ++ G++TPE L T +++A +++IE I ++
Sbjct: 12 AAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN 71
Query: 320 LFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
L+ Q + TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 72 LYNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 127
>gi|378733301|gb|EHY59760.1| transcription elongation factor S-II [Exophiala dermatitidis
NIH/UT8656]
Length = 306
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 13/175 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE----KLGRSTG 260
ND++R+ L+ + L + ++I+D +A +ES K S+
Sbjct: 140 NDTARNNCIGLMYDGLCLGSDLPMKQILD---------LAKEIESAALNLPEAKGSSSSP 190
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K K RS+ N++++ NP LRKR+L GEVT R V+M+ EEM S +++ + I ++ +
Sbjct: 191 VYKDKIRSLYQNLKNKSNPGLRKRILSGEVTAVRFVSMTHEEMKSKQQREEEIKIAKENM 250
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E + + +C +C Q+K +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 251 NNAMVAQEEKSVSTSLECGKCHQKKVSYSQAQTRSADEPMTTFCECLNCGNRWKF 305
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
D I AV+VE F L T K K RS+ N++++ N DL K+V+ G+++PE+ V M
Sbjct: 168 DVIARAVAVEHAAFTTLKGETPEYKKKIRSLFTNLKNKSNRDLGKQVMAGDISPEKFVNM 227
Query: 299 SPEEMAS-DERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSAD 357
+ EE+ S D+R+ ++E KE + + Q + +D +C +C +++ +Y Q QTRSAD
Sbjct: 228 TDEELKSEDQRKMELELEKEN-MKKAQVPMAEKSISDSLECGKCKKKRVSYTQAQTRSAD 286
Query: 358 EPMTTYVTCVNCSKRWKF 375
EPMTT+ C+NC RWKF
Sbjct: 287 EPMTTFCECMNCGNRWKF 304
>gi|429329053|gb|AFZ80812.1| transcription elongation factor S-II, putative [Babesia equi]
Length = 294
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 18/181 (9%)
Query: 205 NDSSRDK-IRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEK 263
ND R+K +R L + +S + D +++ ++ +E ++ A+K
Sbjct: 122 NDEMRNKALRYLFKSFVSGHSCNPDIAVLN--------KLVYDIEGELYTHYITRLNAQK 173
Query: 264 ---LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
L+ +SI FN++D N R+ GE+ LVTM +MASDE++ Q NI +++L
Sbjct: 174 EYNLQLKSIGFNLKDPNNKSFNDRIYKGEINSLDLVTMKSIDMASDEKKLQRNNILQESL 233
Query: 321 FECQRGGEA------TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
CQ + QF+C +C Y+QMQTRS+DEPMTT+VTC+ C RWK
Sbjct: 234 QACQSDWAVKNIFLNNKSKGQFRCFKCKSSDTVYHQMQTRSSDEPMTTFVTCLKCQNRWK 293
Query: 375 F 375
F
Sbjct: 294 F 294
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 20/183 (10%)
Query: 205 NDSSRDK-IRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEK 263
ND RDK I L + L+ E + D A R+A +E+ +F + + +K
Sbjct: 128 NDDIRDKAIIYLFKSLLA-----GKENVYDHKKAG---RLAYDMEAGLFSRYLYNQNNQK 179
Query: 264 ---LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
LK +SI FN++D KN ++ G++ P + M EMAS+E++ + NI +++L
Sbjct: 180 DYTLKLKSIAFNLKDPKNSTFSDKIYNGDIEPRSVAIMEAAEMASEEKKMERINILQESL 239
Query: 321 FECQRGGEATATT--------DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKR 372
CQ QFKC +C + YYQ+QTRS+DEPMTT+VTC+ C+ R
Sbjct: 240 EACQSDWAVKNILLSKEGKKKGQFKCLKCHSMETVYYQLQTRSSDEPMTTFVTCLECNNR 299
Query: 373 WKF 375
WKF
Sbjct: 300 WKF 302
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
Query: 264 LKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
+KYR S + N++D +NP LR+ VL G ++ E + M+ EEMASDE + + ++A
Sbjct: 1 MKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDELRELRNAMTQEA 60
Query: 320 LFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK C
Sbjct: 61 IREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKRC 117
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 75/113 (66%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS + N++D KNP LR++VL G +TP+++ M+ EEMASDE + + + ++A+ E
Sbjct: 4 KNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDELKEIRKAMTKEAIRE 63
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q TD F C +C ++ CTY Q+QTRS+DEPMTT+V C C RWK+
Sbjct: 64 HQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKW 116
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 98/161 (60%), Gaps = 9/161 (5%)
Query: 215 LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIR 274
L+ N L+ ++ ++ E++++ A++VE+ F K T K K RS+ N++
Sbjct: 155 LIYNGLAYRSTASENEVVNK---------AITVENAAFVKFKGETADYKKKIRSLFTNLK 205
Query: 275 DEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD 334
++ N +L K VL GE++PE+ V MS +E+ S+E++++ ++++ + Q E + ++
Sbjct: 206 NKSNKELGKSVLSGEISPEKFVVMSDDELKSEEQRKKELELEKENMKMAQVPQEQKSISE 265
Query: 335 QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+C +C +++ +Y Q QTR+ADEPMTT+ C+ C RWKF
Sbjct: 266 SLECGKCKKKQVSYTQAQTRAADEPMTTFCECMACGNRWKF 306
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 98/161 (60%), Gaps = 9/161 (5%)
Query: 215 LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIR 274
L+ N L+ ++ ++ E++++ A++VE+ F K T K K RS+ N++
Sbjct: 156 LIYNGLAYRSTASENEVVNK---------AITVENAAFVKFKGETADYKKKIRSLFTNLK 206
Query: 275 DEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD 334
++ N +L K VL GE++PE+ V MS +E+ S+E++++ ++++ + Q E + ++
Sbjct: 207 NKSNKELGKSVLSGEISPEKFVVMSDDELKSEEQRKKELELEKENMKMAQVPQEQKSISE 266
Query: 335 QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+C +C +++ +Y Q QTR+ADEPMTT+ C+ C RWKF
Sbjct: 267 SLECGKCKKKQVSYTQAQTRAADEPMTTFCECMACGNRWKF 307
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
D + +E +F++ + K + RS + N++D KNP+LR+ VL G + +R M
Sbjct: 81 DDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNVLCGNIATDRFARM 140
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
S EEMASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADE
Sbjct: 141 SAEEMASDELKEMRKNLTKEAIREHQMARTGGTQTDLFSCGKCKKKNCTYTQVQTRSADE 200
Query: 359 PMTTYVTC 366
PMTT V C
Sbjct: 201 PMTTLVFC 208
>gi|84998998|ref|XP_954220.1| transcription elongation factor [Theileria annulata]
gi|65305218|emb|CAI73543.1| transcription elongation factor, putative [Theileria annulata]
Length = 418
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
+ I FN++D KN ++ ++ L+ MS +MASDE++ Q I E++L CQ
Sbjct: 304 KCIGFNLKDNKNTIFNYKLYNNIISINELIHMSSLQMASDEKKLQRNEILEQSLEACQSD 363
Query: 327 GE------ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E T QFKC++C + TYYQ+QTRS+DEPMTT+VTC+NC+ RWKF
Sbjct: 364 WEIKNIFLNNKTKGQFKCNKCNSKITTYYQLQTRSSDEPMTTFVTCLNCNNRWKF 418
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACD-PIRVAV 245
KPS ++ P +Q D+ R K RE+LANAL +V E E C P +
Sbjct: 152 KPSSTPVSIP--SQSSNTTDAVRLKCREMLANAL-RVDGEPPE-------GCQTPEELGE 201
Query: 246 SVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
+E +F + + K + RS + N++D KNP LR + G +T +RL M+ EEMAS
Sbjct: 202 ELEEAIFVEFKNTDMRYKNRIRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSEEMAS 261
Query: 306 DERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVT 365
DE + + ++A+ + Q TD KC +C +R CTY Q+QTRSADEPMTT+V
Sbjct: 262 DEMKLLRDRFVKEAINDAQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVM 321
Query: 366 C 366
C
Sbjct: 322 C 322
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 55/221 (24%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEV-NACDPIRVAVSVESVMFEKLGRSTGAEK 263
ND R K RELLA++L DEE+ + NA P +A +E + + + K
Sbjct: 130 NDPVRIKCRELLASSLV-----LDEEVKVRIPNAQCPKELAAKIEDSIHLEFKNTDQKYK 184
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
+ RS + N++D+KNP L++ V++G + PER+ MS EEMASDE ++ ++++ +
Sbjct: 185 ARIRSRVANLKDKKNPKLKEGVIMGLIPPERIANMSAEEMASDEMRQLRAKFTKESIDDH 244
Query: 324 QRGGEATATTDQFKCSRCGQ---------------------------------------- 343
Q + TD FKC +CG+
Sbjct: 245 QMSRQEGTVTDLFKCGKCGKKNCTYNQEMASDEMRQLRAKFTKESIDDHQMSRQEGTVTD 304
Query: 344 ---------RKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ CTY Q+QTRS+DEPMTT+V C+ C RWK
Sbjct: 305 LFKCGKCGKKNCTYNQLQTRSSDEPMTTFVFCMECGNRWKL 345
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Query: 241 IRVAVSVESVMFEKLGRSTG-AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
++ A VE+ F+ G T A + K RS+ N++++ N LR RVL E+ P+R V M+
Sbjct: 162 LQKATEVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEIAPDRFVNMT 221
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
+E+ SDER+ + I+++ + + G + + +C +CGQRK TY + QTR+ADEP
Sbjct: 222 HDELKSDERREEDLKIQKENMDKAMVGQPERSISKSLQCGKCGQRKVTYTEAQTRAADEP 281
Query: 360 MTTYVTCVNCSKRWK 374
MT + TC+ C K W+
Sbjct: 282 MTLFCTCLACGKSWR 296
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP A +E ++ +L K + RS + N+RD KNP LR++ L+G +TP+ L M
Sbjct: 7 DPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRM 66
Query: 299 SPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADE 358
+PEEMASD+ ++ + + ++ Q G T+QFKC RC +R CT Q+ R DE
Sbjct: 67 TPEEMASDDLKQMRQQYVQDSINAAQLGNVEGTKTNQFKCERCQKRNCT--QLHIRDGDE 124
Query: 359 PMTTYVTCVNCSKRWK 374
P+ T+V C +C RWK
Sbjct: 125 PIITFVMCDDCGNRWK 140
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 128/255 (50%), Gaps = 22/255 (8%)
Query: 137 VKVEKTGSVSR--SETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAP--SVRKPSQGT 192
+K K+ V+R SE V + E N V G ++ + KQ P + S G
Sbjct: 56 LKQHKSPDVARLSSEIVSKWRSEVNKQKVTVGGSPAASQRSSDSPKQTPNGTASPASTGA 115
Query: 193 IATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDE---VNACDPIRV----AV 245
A+ +L + D K +L + ++ +I + +++ +P RV A+
Sbjct: 116 AASDRLAKSTVPPDKRSWKTDQLTITHTQNKSRDSCIGLIYDGLCLHSTEPPRVVLQKAI 175
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
VE + G T + + K RS+ N++++ NPDLR RVL E+TP++ V M+ +E+
Sbjct: 176 QVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHDELK 235
Query: 305 SD-----ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
SD ER+ EN+ + + + +R + + +C +CGQ+K TY + QTRSADEP
Sbjct: 236 SDAQREEERRIHKENMDKAMVAKAER-----SISTSLQCGKCGQKKVTYTEAQTRSADEP 290
Query: 360 MTTYVTCVNCSKRWK 374
MT + TCV C K W+
Sbjct: 291 MTLFCTCVVCGKSWR 305
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 10/179 (5%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPI-RVAVSVESVMFEKLGRSTGAE- 262
ND RDK ++ L A +S+ I++ D I + + V EK RS+ E
Sbjct: 227 NDMHRDKAKQFLFKAFVVGSSDNLLYFIEKKKLNDIIYNIECELYKVYMEK--RSSQKEY 284
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
++ +SI FN+ D+KNP+ ++V ++ + L TM+ ++MASDE++ + + +++L
Sbjct: 285 NMQLKSIKFNLSDKKNPNFNEKVYSEFISSKALATMNSQDMASDEKKNERKKCLQESLLA 344
Query: 323 CQRGGEAT------ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
CQ + + +F+C +C Y+Q+QTRS+DEPMTT+VTC+ C+ RWKF
Sbjct: 345 CQSDWDVKNILLKKSRKGEFQCFKCKGYDTIYHQLQTRSSDEPMTTFVTCLKCNNRWKF 403
>gi|398398099|ref|XP_003852507.1| hypothetical protein MYCGRDRAFT_59339, partial [Zymoseptoria
tritici IPO323]
gi|339472388|gb|EGP87483.1| hypothetical protein MYCGRDRAFT_59339 [Zymoseptoria tritici IPO323]
Length = 314
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 164/378 (43%), Gaps = 81/378 (21%)
Query: 7 ELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKH 66
+L + AK+ A +A SG P S ++ L L++F T D+L +++G + L ++
Sbjct: 8 QLHEVAKQIAKAA-----DSGDPP-SSLLNILAPLETFKATEDLLRQSKIGVAVTKLRQN 61
Query: 67 PREKIQIVASNLLDIWKKIVIEETTR--------NKK-NGSTGDKSSVTTGVVKPDSGKI 117
K+ A+ L++ WK+ V + R NK NG+ +SS T+ P+ K
Sbjct: 62 KDPKVSETATRLVNRWKQEVQSKKKRPDSSPAPANKALNGAANGRSSGTSSPA-PNGSK- 119
Query: 118 DKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIE 177
S VK E SV R V EK+ T D V
Sbjct: 120 ------SEVKKE------------PASVPRQSKVDPEKRNTGADGVDH------------ 149
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNA 237
K+T D+ RD +L+ + ++ ++ E+ + ++
Sbjct: 150 -------------------KIT-----GDAVRDGCLKLMYDGIAFMSKESPDAVLT---- 181
Query: 238 CDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLV 296
VA VE FE R T AE K K RS+ N++ N LRK V E+ PE+ V
Sbjct: 182 -----VARKVEVAAFEHFKRETNAEYKTKMRSLFQNLKMRSNTLLRKNVFSEEIPPEKFV 236
Query: 297 TMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSA 356
M+ EE+ S E++ + I+++ + + EA A + C +C +Y Q QTRSA
Sbjct: 237 AMTSEELKSAEKRAEDALIEKENMNKSMTPKEAKAISTTMTCGKCKGSAVSYSQAQTRSA 296
Query: 357 DEPMTTYVTCVNCSKRWK 374
DEP+TT+ C C RWK
Sbjct: 297 DEPLTTFCECTLCGNRWK 314
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 15/150 (10%)
Query: 235 VNACDPIRV----AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+++ +P RV A+ VE + G T + + K RS+ N++++ NPDLR RVL E
Sbjct: 161 LHSTEPPRVVLQKAIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNE 220
Query: 290 VTPERLVTMSPEEMASD-----ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQR 344
+TP++ V M+ +E+ SD ER+ EN+ + + + +R + + +C +CGQ+
Sbjct: 221 ITPDKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAER-----SISTSLQCGKCGQK 275
Query: 345 KCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K TY + QTRSADEPMT + TCV C K W+
Sbjct: 276 KVTYTEAQTRSADEPMTLFCTCVVCGKSWR 305
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
+RD L+ N L+ E +I + A++VE F+ G T K K R
Sbjct: 142 TRDACIGLMYNGLAFKCEEPPTHVIIK---------AMAVEQAAFDHFGGETKDYKEKLR 192
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++ N LRKRV+ G++ P R V M+ EE+ S+E +++ + ++ + + + Q
Sbjct: 193 SLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHEELKSEEMKKKDDLLEMENMKKAQVPM 252
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D C +C Q+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 253 AEKSISDALTCGKCHQKKVSYSQAQTRSADEPMTTFCECQVCGHRWKF 300
>gi|340914730|gb|EGS18071.1| putative transcription elongation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 303
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 9/167 (5%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
RD +L N L+ +E+ EEI+ + A+ VE+ FE T + K R
Sbjct: 145 RDGCIGVLYNGLAYRRTESIEEILQK---------AMEVEAAAFEVYKGDTPEYRSKIRG 195
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+M +++ + N +L RV+ GE+TP + V M+ +E+AS+ ++ + ++ + + + Q
Sbjct: 196 LMTSLKRKDNAELGDRVMKGEITPHQFVKMTEKELASEAQRLRDAQLERENMLKAQVPMA 255
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D +CS+C Q+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 256 QKSISDSLQCSKCKQKKVSYSQAQTRSADEPMTTFCECTVCGHRWKF 302
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
R K RE+LA AL C DP A +E ++ +L K + R
Sbjct: 6 RMKCREMLAAALKSGPMPP---------GCGDPHDKAAQLEDAIYGELSSCQVKYKNRIR 56
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S + N+RD KNP LR++ L+G +TP+ L M+PEEMASD+ ++ + + ++ Q G
Sbjct: 57 SRLANLRDPKNPGLREKFLVGLITPQELSRMTPEEMASDDLKQMRQQYVQDSINAAQLGN 116
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T+ FKC RC +R CT Q+ R DEP+ T+V C +C RWK
Sbjct: 117 VEGTKTNLFKCERCQKRNCT--QLHIRDGDEPLITFVMCDDCGNRWK 161
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 245 VSVESVMFEKLGRSTGAE----KLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLV 296
VS+ V+ + R E +KYR S + N++D +NP LR+ VL G ++ +
Sbjct: 72 VSLAKVLIKNWKRLLAGELKGTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIA 131
Query: 297 TMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSA 356
M+ EEMASDE + + ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSA
Sbjct: 132 KMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSA 191
Query: 357 DEPMTTYVTCVNCSKRWK 374
DEPMTT+V C C RWK
Sbjct: 192 DEPMTTFVLCNECGNRWK 209
>gi|85119699|ref|XP_965694.1| hypothetical protein NCU02563 [Neurospora crassa OR74A]
gi|28927506|gb|EAA36458.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567143|emb|CAE76438.1| related to transcription elongation factor TFIIS [Neurospora
crassa]
gi|336464865|gb|EGO53105.1| hypothetical protein NEUTE1DRAFT_73389 [Neurospora tetrasperma FGSC
2508]
Length = 298
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 9/161 (5%)
Query: 215 LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIR 274
+L N L+ +E+ EE++ + AV VE+ +F+ + K R++ +++
Sbjct: 146 VLYNGLAYRRTESIEEVV---------KRAVEVENALFKACKGENQEYRSKGRTLFTSLK 196
Query: 275 DEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD 334
+ N L +RV+ GE+ ERLV +S +E+AS+E++ + E ++++ + + Q + +D
Sbjct: 197 RKDNAALGRRVMSGELPVERLVVLSDKELASEEQRARDEELEKENMKKAQVPMAEKSISD 256
Query: 335 QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
KC +CGQRK +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 257 ALKCGKCGQRKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 297
>gi|119195887|ref|XP_001248547.1| hypothetical protein CIMG_02318 [Coccidioides immitis RS]
Length = 324
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 10/171 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KL 264
+ +RD LL + L ++E+ ++ + ++ VE+ + G T + +
Sbjct: 142 NKTRDSCIGLLYDGLCLNSTESPRTVLQK---------SIEVEAAAYSVFGPETKEQYRT 192
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS+ N+R++ NP LR RVL E+ P++ V M+ +E+ SDER+ + I+++ + +
Sbjct: 193 KIRSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENMDKAM 252
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + +C +CGQRK TY + QTRSADEPMT + TC+ C K W+
Sbjct: 253 VAKAERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWRH 303
>gi|225683287|gb|EEH21571.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb03]
gi|226288233|gb|EEH43745.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 235 VNACDPIRV----AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+N+ +P RV A VE+ + G T + + K RS+ N++++ NP LR RVL E
Sbjct: 161 LNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNE 220
Query: 290 VTPERLVTMSPEEMASD-----ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQR 344
VT ER V M+ +E+ SD ER+ Q EN+ + + + +R + + +C +CGQ+
Sbjct: 221 VTAERFVRMTHDELKSDAQREEERRIQKENMDKAMVAKAER-----SISTSLQCGKCGQK 275
Query: 345 KCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K TY + QTRSADEPMT + TCV C K W+
Sbjct: 276 KVTYTEAQTRSADEPMTLFCTCVVCGKSWR 305
>gi|295672377|ref|XP_002796735.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283715|gb|EEH39281.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 306
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 235 VNACDPIRV----AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+N+ +P RV A VE+ + G T + + K RS+ N++++ NP LR RVL E
Sbjct: 161 LNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNE 220
Query: 290 VTPERLVTMSPEEMASD-----ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQR 344
VT ER V M+ +E+ SD ER+ Q EN+ + + + +R + + +C +CGQ+
Sbjct: 221 VTAERFVRMTHDELKSDAQREEERRIQKENMDKAMVAKAER-----SISTSLQCGKCGQK 275
Query: 345 KCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K TY + QTRSADEPMT + TCV C K W+
Sbjct: 276 KVTYTEAQTRSADEPMTLFCTCVVCGKSWR 305
>gi|350296969|gb|EGZ77946.1| transcription elongation factor [Neurospora tetrasperma FGSC 2509]
Length = 298
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 95/161 (59%), Gaps = 9/161 (5%)
Query: 215 LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIR 274
+L N L+ +E+ EE++ + A+ VE+ +F+ + K R++ +++
Sbjct: 146 VLYNGLAYRRTESIEEVV---------KRAIEVENALFKACKGENQEYRSKGRTLFTSLK 196
Query: 275 DEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD 334
+ N L +RV+ GE+ ERLV +S +E+AS+E++ + E ++++ + + Q + +D
Sbjct: 197 RKDNAALGRRVMSGELPVERLVVLSDKELASEEQRARDEELEKENMKKAQVPMAEKSISD 256
Query: 335 QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
KC +CGQRK +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 257 ALKCGKCGQRKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 297
>gi|430810870|emb|CCJ31590.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430814597|emb|CCJ28186.1| unnamed protein product [Pneumocystis jirovecii]
Length = 276
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 275 DEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD 334
D+ NP LR+ V+ GE++ R TM+P+EMAS ER+ + + I+E LF Q A TD
Sbjct: 153 DKNNPTLRQNVVSGELSIPRFCTMTPQEMASKERREEDKKIEEMNLFNAQGAKPIKAITD 212
Query: 335 QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTC 366
F+C +C QRK +YYQMQTRSADEPMTT+ C
Sbjct: 213 LFQCGKCKQRKVSYYQMQTRSADEPMTTFCEC 244
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 96/172 (55%), Gaps = 9/172 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEKL 264
D+ R K RELL AL K+ E NAC P +A +E ++ + + K
Sbjct: 129 DAVRLKCRELLTQAL-KIDGE-------NPNACATPEELAEDLEECIYAEFKNTDMRYKN 180
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP LR L G + RL M+PEEMASDE ++ E ++A+ + Q
Sbjct: 181 RVRSRVANLKDPKNPTLRTNFLNGVINAARLAKMTPEEMASDEMKKLREKFIKEAIDDAQ 240
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
T+ KC +C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 241 LATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 292
>gi|336262956|ref|XP_003346260.1| DST1 protein [Sordaria macrospora k-hell]
gi|380093589|emb|CCC08553.1| putative DST1 protein [Sordaria macrospora k-hell]
Length = 298
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 107/193 (55%), Gaps = 13/193 (6%)
Query: 187 KPSQGTIATPKL-TQLIKCNDSS---RDKIRELLANALSKVTSEADEEIIDEVNACDPIR 242
KP +G + T + N +S R+ +L N L+ +E+ EE++ +
Sbjct: 114 KPYEGDVEKRHFKTDKVDINRTSSQTRNNTIGVLYNGLAYRRTESIEEVV---------K 164
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
AV VE+ +F+ + K R++ +++ + N L +RV+ GE+ +RLV +S +E
Sbjct: 165 RAVEVENALFKACKGENQEYRSKARTLFTSLKRKDNAALGRRVMSGELPVDRLVVLSDKE 224
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
+AS+E++ + E ++++ + + Q + +D KC +CGQRK +Y Q QTRSADEPMTT
Sbjct: 225 LASEEQRARDEELEKENMKKAQVPMAEKSISDALKCGKCGQRKVSYSQAQTRSADEPMTT 284
Query: 363 YVTCVNCSKRWKF 375
+ C C RWKF
Sbjct: 285 FCECTVCGNRWKF 297
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 138 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 186
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF 321
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+
Sbjct: 187 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 246
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
E Q TD F C +C ++ CTY Q+QTRSADEPMT
Sbjct: 247 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 75/117 (64%), Gaps = 10/117 (8%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE-----RQRQIENIKE 317
+ K RS+ N++++ NP LR RVL EVTPER V M+ EE+ SDE R+ Q EN+ +
Sbjct: 192 RTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQREKDRKIQKENMDK 251
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +R + + +C +CGQRK TY + QTRSADEPMT + TC++C K W+
Sbjct: 252 AMVAQAER-----SISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMHCGKSWR 303
>gi|303321710|ref|XP_003070849.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110546|gb|EER28704.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320040335|gb|EFW22268.1| transcription elongation factor S-II [Coccidioides posadasii str.
Silveira]
gi|392862246|gb|EAS37125.2| transcription elongation factor S-II [Coccidioides immitis RS]
Length = 303
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 10/170 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KL 264
+ +RD LL + L ++E+ ++ + ++ VE+ + G T + +
Sbjct: 142 NKTRDSCIGLLYDGLCLNSTESPRTVLQK---------SIEVEAAAYSVFGPETKEQYRT 192
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS+ N+R++ NP LR RVL E+ P++ V M+ +E+ SDER+ + I+++ + +
Sbjct: 193 KIRSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENMDKAM 252
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +C +CGQRK TY + QTRSADEPMT + TC+ C K W+
Sbjct: 253 VAKAERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 302
>gi|115385046|ref|XP_001209070.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196762|gb|EAU38462.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 305
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++++ NP LR RVL EVTPE V MS +E+ S E++ Q I+++ + +
Sbjct: 193 RTKIRSLYQNLKNKSNPTLRVRVLSSEVTPEHFVKMSHDELRSAEQREQDAKIQKQNMDK 252
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + +C +CGQRK TY + QTRSADEPMT + TC+NC K WK
Sbjct: 253 AMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSWK 304
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 64/82 (78%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RSIMFN++D+ N D R+R+LLG + PE +V+M+ +MAS++R+++ E IK K++FEC+ G
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQRKKETEGIKAKSMFECELG 60
Query: 327 GEATATTDQFKCSRCGQRKCTY 348
A A+TDQFKC +C QRK TY
Sbjct: 61 ATAVASTDQFKCGKCLQRKTTY 82
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 96/166 (57%), Gaps = 9/166 (5%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R++ L+ N L+ + E + +I + AV+VE+ + K K RS
Sbjct: 151 RNQCIGLIYNGLAYRSVEPESSVIAK---------AVAVENAAYTVFNGEGAEYKKKIRS 201
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N++++ N DL KRV+ G++ PER V+M+ E++ S++++R ++++ + + Q
Sbjct: 202 LFANLKNKSNRDLGKRVMSGDIAPERFVSMTDEDLKSEDQRRMELELEKENMKKAQVPMA 261
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ +D +C +C +++ +Y Q QTRSADEPMTT+ C+NC RWK
Sbjct: 262 EKSISDSLECGKCKKKRVSYTQAQTRSADEPMTTFCECMNCGNRWK 307
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 10/173 (5%)
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
+ + +RD +L N L+ +E+ EE++ + VE+ + G T
Sbjct: 144 RTGNKTRDGSIGVLYNGLAYRATESIEEVLQRT---------MEVEAAAYAAYG-DTNEY 193
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K R +M +++ + NP+L +RVL G++ PE+ M+ EE+ASD ++ + ++ + + +
Sbjct: 194 RAKIRGLMTSLKRKDNPELGRRVLRGDIAPEKFAVMTDEELASDAQRERDAALERENMLK 253
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + +D +C +C Q+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 254 AQVPMAQRSISDSLQCGKCKQKKVSYSQAQTRSADEPMTTFCECTVCGHRWKF 306
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 7/170 (4%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
DS RDK E+L+ AL + D++ + CD ++A +E + +L + +
Sbjct: 189 GDSVRDKCVEMLSAAL-----KMDDDYKEYGVNCD--KMASEIEDHILSELKGTDMKYRN 241
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D +NP+LR+ VL G ++ + M+ EEMASDE + + +A+ E Q
Sbjct: 242 RVRSRISNLKDPRNPNLRRNVLCGAISTSLIARMTAEEMASDELKELRNAMTLEAIREHQ 301
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TTD F+C +C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 302 MAKTGGTTTDLFQCXKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 351
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 12/167 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
R K RE+LA AL + D C DP +A +E ++ +L K + R
Sbjct: 6 RIKCREMLAAAL---------QAGDLPEGCGDPEDMAAQLEEAIYVELKCCQVKYKNRIR 56
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S + N+RD KNP LR++ LLG + E++ M+PEEMASD+ ++ + + ++ + Q
Sbjct: 57 SRLANLRDPKNPGLREKFLLGLIGVEKMARMTPEEMASDDLKQMRQKFVQDSINKAQMAK 116
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TD FKC RC +R C Q+ TR DEPM T+V C C RWK
Sbjct: 117 FQGTKTDLFKCDRCHKRNCI--QLHTRDGDEPMVTFVMCDECGNRWK 161
>gi|66816447|ref|XP_642233.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
gi|74856708|sp|Q54YG9.1|TCEA1_DICDI RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor tf2s
gi|60470313|gb|EAL68293.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
Length = 319
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 108/208 (51%), Gaps = 20/208 (9%)
Query: 175 IIEEEKQAPSVRKPSQGTIATPKLTQLIK----CNDSSRDKIRELLANALSKVTSEADEE 230
+++E K+ + P+ ++P + LI N R+K +L AL T++ DE
Sbjct: 126 LLQENKK---ISPPTTPKTSSPPIASLIAPITGANADLRNKTIQLFVEAL---TTDNDET 179
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+ P +AV +E+ M++ + K K RS FN++ KN LR +L ++
Sbjct: 180 M------SPPEDIAVEIEAEMYDIYRGVSKEYKEKLRSFKFNLK--KNDILRLSLLNRQI 231
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ 350
+ + +M MASD+ + + + + + G ATTDQF+C +C QRKCTY Q
Sbjct: 232 SVAKFCSMDIYSMASDDLKEERKKLDKFNTEASMLGQNNEATTDQFQCGKCKQRKCTYTQ 291
Query: 351 MQTRSADEPMTTYVTCV--NCSKRWKFC 376
+QTRSADEP TT+V C C RW+FC
Sbjct: 292 LQTRSADEPPTTFVKCCVKGCGNRWRFC 319
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 10/171 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KL 264
D+ RD +L+ + ++ ++ E+ + ++D VA VE FE T + K
Sbjct: 151 DAVRDGCLKLMYDGIAFMSEESPDTVMD---------VARKVELAAFEHFKSETNQDYKA 201
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS+ N++ + N LRK V ++ P R VTM+ +E+ S+E++++ E ++++ + +
Sbjct: 202 KMRSLFQNLKMKNNTLLRKDVFTMKIEPTRFVTMTSDELKSEEKRKKDEELEKENMRQAM 261
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
E A + F C +C Q + Y Q QTRSADEP+TT+ C C RWKF
Sbjct: 262 TAVEEKAISTTFTCGKCKQSRVAYSQAQTRSADEPLTTFCECTMCGHRWKF 312
>gi|296421697|ref|XP_002840401.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636616|emb|CAZ84592.1| unnamed protein product [Tuber melanosporum]
Length = 110
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N++ + N +LR RV+ GE+TP RL TM EMAS +R++ E + E+ +
Sbjct: 4 LFLNLKSKDN-NLRNRVVSGEITPARLSTMESSEMASAQRRQADEKLMEENMRTAMMAKS 62
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +DQ C +CGQ+K +Y Q QTRSADEPMTT+ TC CS RWKF
Sbjct: 63 EKSISDQLTCGKCGQKKVSYTQAQTRSADEPMTTFCTCEICSHRWKF 109
>gi|320588310|gb|EFX00779.1| transcription elongation factor s 2 [Grosmannia clavigera kw1407]
Length = 332
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
SRD LL N L+ ++E E ++ + A+ VE F T + K R
Sbjct: 173 SRDNCIGLLYNGLAFRSTELPERVLAK---------AIEVEKAAFVVYKGETAEYRAKLR 223
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N+++ NP L +RV+ GE+ + V MS +E+ S ++ +++++ + + Q
Sbjct: 224 SLFQNLKNRSNPALGRRVVAGEIAADAFVVMSSDELKSAHLKQLESDLQKENMKKAQVPM 283
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D C +C QRK +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 284 TEKSISDALTCGKCKQRKVSYTQAQTRSADEPMTTFCECTVCGHRWKF 331
>gi|71032861|ref|XP_766072.1| transcription elongation factor SII [Theileria parva strain Muguga]
gi|68353029|gb|EAN33789.1| transcription elongation factor SII, putative [Theileria parva]
Length = 324
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
+ I FN++D KN L ++ +T + L M+ +MASDE++ Q I E++L CQ
Sbjct: 210 KCIAFNLKDVKNTILNYKLYNKMITVDELTRMTSLQMASDEKKLQRNEILEQSLEACQSD 269
Query: 327 GE------ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A + QFKC++C + TYYQ+QTRS+DEPMTT+VTC+NC RW+F
Sbjct: 270 WAIKNIFLAKKSAGQFKCNKCNSKVTTYYQLQTRSSDEPMTTFVTCLNCKNRWRF 324
>gi|425781061|gb|EKV19043.1| Transcription elongation factor S-II [Penicillium digitatum PHI26]
gi|425783194|gb|EKV21053.1| Transcription elongation factor S-II [Penicillium digitatum Pd1]
Length = 306
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Query: 235 VNACDPIRV----AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
V + +P +V A++VE ++ LG T E + K RS+ N++++ NP LR RV+ GE
Sbjct: 161 VGSTEPPKVILSRAIAVEISAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVVEGE 220
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYY 349
+T ++ V MS +E+ S E++ I+++ + + + + + +C +CGQRK TY
Sbjct: 221 ITSDQFVRMSHDELRSVEQREADAKIQKENMDKAMVAQQERSISKSLQCGKCGQRKVTYT 280
Query: 350 QMQTRSADEPMTTYVTCVNCSKRWK 374
+ QTR+ADEPMT + TC+NC K W+
Sbjct: 281 EAQTRAADEPMTLFCTCLNCGKSWR 305
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 156/380 (41%), Gaps = 87/380 (22%)
Query: 7 ELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKH 66
+L+D K+ S AI+ G + + L L+ F T D+L +++G + L ++
Sbjct: 8 QLYDTGKQI--SKAIES----GDTSATILQLLAPLEQFKATEDLLRQSKIGVAVTKLRQN 61
Query: 67 PREKIQIVASNLLDIWKKIVIEETTR----------NKKNGSTGDKSSVTTGVVKPDSGK 116
K+ A++L++ WK+ V + R K +T +SS T P +
Sbjct: 62 KDPKVASTATSLVNRWKQEVNAKKKRPDGTASPAPAGKGLNATNGRSSGTNSPAPPSKPE 121
Query: 117 IDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKII 176
I K Q R+ V EK+ T D I
Sbjct: 122 IKKEQ-------------------------RANKVDPEKRNTKTDG-------------I 143
Query: 177 EEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVN 236
E E D +RD +L+ + ++ ++ ++ + I D
Sbjct: 144 EHEV-----------------------TGDRARDGCLKLMYDGIAYMSDKSPDAIFD--- 177
Query: 237 ACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
VA VE FE T E K K RS+ N++ + N LRK V E+ P+R
Sbjct: 178 ------VARKVEVAAFEHFKHQTSPEYKAKMRSLYQNLKMKGNARLRKDVYSMEIMPKRF 231
Query: 296 VTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRS 355
V M+ +E+ S+E +++ I+ + + + E A + F C +C Q K Y Q QTRS
Sbjct: 232 VAMTSDELKSEEMRKEDAVIERENMNKAMTAQEEKAISTTFVCGKCKQAKVAYSQAQTRS 291
Query: 356 ADEPMTTYVTCVNCSKRWKF 375
ADEP+TT+ C C RWKF
Sbjct: 292 ADEPLTTFCECTVCGNRWKF 311
>gi|261203309|ref|XP_002628868.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239586653|gb|EEQ69296.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239608307|gb|EEQ85294.1| transcription elongation factor S-II [Ajellomyces dermatitidis
ER-3]
Length = 303
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 15/150 (10%)
Query: 235 VNACDPIRV----AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+N+ +P R+ A+ VE + LG T + + K RS+ N++++ NP LR RVL E
Sbjct: 158 LNSTEPPRIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNE 217
Query: 290 VTPERLVTMSPEEMASD-----ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQR 344
VT E+ V M+ +E+ SD ER+ EN+ + + + +R + + +C +CGQR
Sbjct: 218 VTAEKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAER-----SVSTSLQCGKCGQR 272
Query: 345 KCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K TY + QTRSADEPMT + TC C K W+
Sbjct: 273 KVTYTEAQTRSADEPMTLFCTCTVCGKSWR 302
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACD-PIRVAVSVESVMFEKLGRSTGAEKLKYR 267
R K RE+LA AL A CD P +A +E ++ +L K + R
Sbjct: 6 RIKCREMLAAALKAGDMPA---------GCDDPEDMAAQLEEAIYVELKSCQVKYKNRIR 56
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S + N+RD KNP LR++ LLG ++ E+L M+PEEMASD+ ++ + ++++ Q
Sbjct: 57 SRLANLRDPKNPALREKFLLGLISVEQLARMTPEEMASDDLKQMRQKFVQESINAAQMAE 116
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
TD FKC RC +R C Q+ TR DE M T+V C C RWK
Sbjct: 117 FQGTKTDLFKCDRCQKRNCI--QLHTRDGDESMITFVMCDECGNRWK 161
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 125/248 (50%), Gaps = 22/248 (8%)
Query: 137 VKVEKTGSVSR--SETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAP--SVRKPSQGT 192
+K K+ V+R SE V + E N V G ++ + KQ P + S G
Sbjct: 122 LKQHKSPDVARLSSEIVSKWRSEVNKQKVTVGGSPAASQRSSDSPKQTPNGTASPASTGA 181
Query: 193 IATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDE---VNACDPIRV----AV 245
AT +L + D K +L + ++ +I + +++ +P RV A+
Sbjct: 182 AATDRLAKSTVPPDKRSWKTDQLTITHTQNKSRDSCIGLIYDGLCLHSTEPPRVVLQKAI 241
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
VES + G T + + K RS+ N++++ NPDLR RVL E+TP++ V M+ +E+
Sbjct: 242 QVESAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHDELK 301
Query: 305 SD-----ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
SD ER+ EN+ + + + +R + + +C +CGQ+K TY + QTRSADEP
Sbjct: 302 SDAQREEERRIHKENMDKAMVAKAER-----SISTSLQCGKCGQKKVTYTEAQTRSADEP 356
Query: 360 MTTYVTCV 367
MT + TCV
Sbjct: 357 MTLFCTCV 364
>gi|255939243|ref|XP_002560391.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585013|emb|CAP83061.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 306
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 89/145 (61%), Gaps = 5/145 (3%)
Query: 235 VNACDPIRV----AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
V + +P +V A++VE ++ LG T E + K RS+ N++++ NP LR RV+ GE
Sbjct: 161 VGSTEPPKVVLSRAIAVEVSAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVIEGE 220
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYY 349
+T ++ V MS +E+ S E++ I+++ + + + + + +C +CGQRK TY
Sbjct: 221 ITADQFVRMSHDELRSVEQREADAKIQKENMDKAMVAQQERSISKSLQCGKCGQRKVTYT 280
Query: 350 QMQTRSADEPMTTYVTCVNCSKRWK 374
+ QTR+ADEPMT + TC++C K W+
Sbjct: 281 EAQTRAADEPMTLFCTCLHCGKSWR 305
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 74/139 (53%), Gaps = 25/139 (17%)
Query: 261 AEKLKY----RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE--------------- 301
A +KY RS + N++D KNP LRK VL G + R+ +MS E
Sbjct: 117 ATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEVGAARPDRSGAPPFH 176
Query: 302 ------EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRS 355
EMASDE ++ + ++A+ E Q TTD +C +C ++ CTY Q+QTRS
Sbjct: 177 VCVSTKEMASDELKQLRNTLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRS 236
Query: 356 ADEPMTTYVTCVNCSKRWK 374
ADEPMTT+V C C RWK
Sbjct: 237 ADEPMTTFVLCNECGNRWK 255
>gi|302927325|ref|XP_003054473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735414|gb|EEU48760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 303
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 104/176 (59%), Gaps = 12/176 (6%)
Query: 202 IKCNDSS-RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
IK DS+ R++ L+ N L+ ++ ++ ++I + AVSVE + + T
Sbjct: 137 IKRTDSTVRNQCIGLIYNGLAYRSTASESDVIAK---------AVSVEHAAYTRNKGETP 187
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS-DERQRQIENIKEKA 319
K K RS+ N++++ N DL +RV+ G+++ +R V M+ +E+ S D+R++++E KE
Sbjct: 188 EYKKKIRSLFTNLKNKSNKDLGRRVMSGDISADRFVVMTDDELKSEDQRKKEVELEKEN- 246
Query: 320 LFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + Q + ++ +C RC +++ +Y Q QTR+ADEPMTT+ C+ C RWKF
Sbjct: 247 MKKAQVPMAEKSISEDLQCGRCKKKQVSYTQAQTRAADEPMTTFCECMACGHRWKF 302
>gi|426222790|ref|XP_004005565.1| PREDICTED: transcription elongation factor A protein 3 [Ovis aries]
Length = 375
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 154/352 (43%), Gaps = 63/352 (17%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S+ ++ +L +T++G + + KH K + +A L+ WK+++ T
Sbjct: 27 LDLLKKLDSWQMSIQLLQTTRIGVAVNGVRKHCSNKEVVALAKVLIRNWKQLLDSPAT-- 84
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
G+K + ++ A K EK K E + S R + +V
Sbjct: 85 ----PKGEK----------------REERVKAKKKEKGLDCSDWKPETSLSPPRKK--RV 122
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKP--------SQGTIATPKLTQLIKC- 204
E+ + DSV + A K E+ S K P + L C
Sbjct: 123 EEPKDRRDSVDSKSSATSSPKRPSMERSNSSKSKAETPRTPSSPSSPTFAPSVCLLAPCY 182
Query: 205 --NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
DS RDK E+L+ AL +AD++ D CD ++A +E + E G S G
Sbjct: 183 LTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHILELWGYSLGQV 235
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
VL G ++ + M+ EEMASDE + + ++A+ E
Sbjct: 236 G--------------------HVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIRE 275
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT+V C C RWK
Sbjct: 276 HQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 327
>gi|429962884|gb|ELA42428.1| transcription elongation factor S-II [Vittaforma corneae ATCC
50505]
Length = 274
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE-RQRQIENIKEKALFECQR 325
RS N+R+ N L V ++ V M P +M S+E R R E IKE L +
Sbjct: 169 RSKSHNLRE--NSKLCLSVYTSKIDTSDFVKMLPAQMQSEELRSRDSEYIKESLL--ASQ 224
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
A A TD F+CS+C Q+KCTY Q+QTRS DEPMTT+VTC NC RWKF
Sbjct: 225 VASAAADTDMFQCSKCKQKKCTYSQLQTRSCDEPMTTFVTCTNCGHRWKF 274
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNAC-DPIRVAVSVESVMFEKLGRSTGAEKL 264
D+ R K RELL AL K E NAC P +A +E ++ + + K
Sbjct: 125 DAVRLKCRELLTQAL-KAAGETS-------NACGSPEELAEELEECIYAEFKNTDMRYKN 176
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+ RS + N++D KNP LR G ++ RL M+PEEMASDE ++ E ++A+ + Q
Sbjct: 177 RVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQ 236
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
T+ KC +C ++ CTY Q+QTRS+DEPMTT+V C C RWKFC
Sbjct: 237 LATVQGTKTEMLKCGKCKKKNCTYNQLQTRSSDEPMTTFVLCNECGNRWKFC 288
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 15/150 (10%)
Query: 235 VNACDPIRV----AVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
+N+ +P R+ A+ VE + LG T + + K RS+ N++++ NP LR RVL E
Sbjct: 228 LNSTEPPRIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNE 287
Query: 290 VTPERLVTMSPEEMASD-----ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQR 344
VT E+ V M+ +E+ SD ER+ EN+ + + + +R + + +C +CGQR
Sbjct: 288 VTAEKFVRMTHDELKSDAQREEERRIHKENMDKAMVAKAER-----SVSTSLQCGKCGQR 342
Query: 345 KCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K TY + QTRSADEPMT + TC C K W+
Sbjct: 343 KVTYTEAQTRSADEPMTLFCTCTVCGKSWR 372
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 20/148 (13%)
Query: 249 SVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDER 308
S ++++L + + + RS + N++D +NP LR+ VL G ++ + M+ EEMASDE
Sbjct: 303 SHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLNGAISAGLIAKMTAEEMASDEL 362
Query: 309 QRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ------------------ 350
++ + ++A+ E Q TTD +CS+C ++ CTY Q
Sbjct: 363 RKLRNAMTQEAIREHQMAKTGGTTTDLLQCSKCKKKNCTYNQVSLLASDKTVSHCVLLAD 422
Query: 351 --MQTRSADEPMTTYVTCVNCSKRWKFC 376
MQTRSADEPMTT+V C C RWK C
Sbjct: 423 CWMQTRSADEPMTTFVLCNECGHRWKVC 450
>gi|156841304|ref|XP_001644026.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114659|gb|EDO16168.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 323
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K +YR I NI + + DL+ ++ G++T L +E+A + ++++E I + LF
Sbjct: 210 KERYRVIYSNIISKNHQDLKHKINNGDITAVFLANCDTKELAPEHLKQKMEEITRQNLFN 269
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + TD+F C +C ++K +YYQ+QTRSADEP+TT+ TC C RWKF
Sbjct: 270 AQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRWKF 322
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 25/165 (15%)
Query: 230 EIIDEVNACDPIRVAVSVESVM--FEKLGRSTGAEK----LKYRSIMFNIRDEKNPDLRK 283
EI++ +P VA ++E M +G + G +K KYR + FN++ KN DLR+
Sbjct: 147 EILEASEGGNPGEVAAAIEVAMARIYHMG-APGEQKKDYMAKYRQLSFNLK--KNGDLRQ 203
Query: 284 RVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC--------------QRGGEA 329
+L V+ ++L+ MS EE+A++E++ QIE +++ A E Q G E
Sbjct: 204 NLLDDSVSGDQLIKMSAEELATEEKRAQIEKLRDDAFQEARLDWAEANHEKIQKQTGTEG 263
Query: 330 TATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T F C RC K + Q QTRSADEPMT +V C NC RWK
Sbjct: 264 TKGL--FTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCGNRWK 306
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 20/180 (11%)
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS-VESVMFEKLGRSTGAEKLKYRS 268
DK+R + + + AD + + + I +A++ + SV F G + K+R
Sbjct: 134 DKMRATVRTKMKENLELADADTSNAPDVATAIEIAMARMFSVGFP--GENKKDYTAKFRQ 191
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ FN++ KN LR+ +LL V+ E+L+ MSPEE+A+DE++ +IE +++ A F+ R
Sbjct: 192 LSFNLK--KNARLREDLLLDVVSAEQLINMSPEELATDEKRHEIEKLRDDA-FQRARLDW 248
Query: 329 ATATTDQ--------------FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
A A D+ F C RC K + Q QTRSADEPMT +V C NC RWK
Sbjct: 249 ADANEDKINKQCGIEKNSKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 308
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 30 EVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIV 86
++ +D L+ L+S P+T ++L T++G+ + L KH EKIQ + NL+ WK I+
Sbjct: 21 DIGEALDLLRALESKPITVNILKETKLGQTVAKLRKHDSEKIQNQSRNLIHSWKSIL 77
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
D + +V+VE+ F K K RS+ N++++ N L + V+ E+ PER V M
Sbjct: 172 DVLAKSVAVEAAAFAHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIPPERFVAM 231
Query: 299 SPEEMASD-ERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSAD 357
+ +++ SD +R+++IE KE + + Q + +D +C +C +++ +Y Q QTRSAD
Sbjct: 232 TDDDLKSDDQRKKEIELEKEN-MKKAQVPMAEKSISDSLECGKCKKKQVSYTQAQTRSAD 290
Query: 358 EPMTTYVTCVNCSKRWKF 375
EPMTT+ C+NC RWKF
Sbjct: 291 EPMTTFCECMNCGNRWKF 308
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 160/353 (45%), Gaps = 28/353 (7%)
Query: 31 VSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIVIEET 90
+ ++ L LK + D+L T++G + TK E+IQ VA +L+D WK I I+E
Sbjct: 50 IKEIIEDLILLKDVEINKDILKQTKIGVTVNKFTKIKNEEIQNVAKDLVDKWKNIAIKEK 109
Query: 91 TRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSV----- 145
+ + S + +V+ + +K KV K EK G++
Sbjct: 110 HSSTSSRSAESLKKRKSELVETSDNHT--CSEDYELKKVKVKNDNEHKSEK-GTIQSDNP 166
Query: 146 ------SRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLT 199
++++ + ++ K N D++ +G ++K E K + K K
Sbjct: 167 NLREPNNKTDDLLLKSKHHNSDNLPIKG-SIKNSYQFSELKHINTDLKALTEWNYNGKFH 225
Query: 200 QLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPI-RVAVSVESVMFEKLGRS 258
ND RDK ++ L A + + +ID D I + + EK +S
Sbjct: 226 -----NDVLRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDIIYNIENELHKFFIEK-KQS 279
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
++ +SI FN+ D+KNP +++ + P + TM+ +EMASDE++++ ++
Sbjct: 280 QKEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQE 339
Query: 319 ALFECQRGGEATATT------DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVT 365
+L CQ + +F+C +C + Y+Q+QTRS+DEPMTT+VT
Sbjct: 340 SLQACQSDWDVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVT 392
>gi|258575459|ref|XP_002541911.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
gi|237902177|gb|EEP76578.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
Length = 303
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 206 DSSRDKIRE----LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
D +++K R+ LL + L ++E+ ++ + ++ VE+ + G T
Sbjct: 138 DHTKNKTRDSCIGLLYDGLCLSSTESPRTVLQK---------SIEVEAAAYNAFGPETKD 188
Query: 262 E-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
+ + K RS+ N++++ N LR RVL E+T ++ V M+ +E+ SDER+ + I+++ +
Sbjct: 189 QYRTKIRSLYQNLKNKSNLSLRMRVLSNEITSDKFVRMTHDELKSDERREEDLKIQKENM 248
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + + +C +CGQRK TY + QTRSADEPMT + TC+ C K W+
Sbjct: 249 DKAMVAKAERSISKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSWR 302
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 7/171 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS R K RE+L AL + + E DE + E + + G + K +
Sbjct: 78 DSVRMKYREMLPAAL-RTGDDCIEMGTDEE------ELGSRTEEAIDPERGNTGMKYKNR 130
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
+S + N+ D KNPDLRK G + P+ L M+ EEMASDE + +N++++A+ E Q
Sbjct: 131 VQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDELKEMHKNLRKEAIREHQM 190
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
D C++C ++ CT Q+Q SA EPMTT+V C C + KFC
Sbjct: 191 AKTGGTQPDSLTCAKCKKKNCTSTQVQACSAGEPMTTFVDCNECGNQQKFC 241
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 29/151 (19%)
Query: 253 EKLGRSTGAEKLKY----RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDER 308
E L + + +KY RS + N++D KNP+LR+ VL G +TP+++ M+ EEMASDE
Sbjct: 144 EMLTTALQTDHMKYKNRVRSRISNLKDAKNPELRRNVLCGAITPQQIAVMTSEEMASDEL 203
Query: 309 QRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQ------------------ 350
+ + + ++A+ E Q TD F C +C ++ CTY Q
Sbjct: 204 KEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQASGPWSISSGCPHLCLAR 263
Query: 351 -------MQTRSADEPMTTYVTCVNCSKRWK 374
+QTRS+DEPMTT+V C C RWK
Sbjct: 264 SHPYTCKVQTRSSDEPMTTFVVCNECGNRWK 294
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D L+ LK+ P+T +L ST+VG + L K E++ +A +L+ WKK++ N
Sbjct: 27 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIGLAKSLIKSWKKLL---DVSN 83
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQK 122
K G + + T K S +D +K
Sbjct: 84 AKTRDPGRDTPLPTSSTKNASEAMDHSRK 112
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 6/138 (4%)
Query: 242 RVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
++ + +E +++ R + K RS+MFN++D KNPDLR ++ G + P +LV + +
Sbjct: 203 QLGLQIEDELYKSFPRLAEYQN-KARSLMFNLKDPKNPDLRMSLIEGVIEPNQLVRLDSK 261
Query: 302 EMAS----DERQR-QIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSA 356
+AS DER + Q N+ + F C +C + TY+QMQTR A
Sbjct: 262 SLASKALQDERNKTQQANLNARRSDWFIENAAKKGNKGFFTCKKCHSKNTTYFQMQTRGA 321
Query: 357 DEPMTTYVTCVNCSKRWK 374
DEPMT ++TC++C +WK
Sbjct: 322 DEPMTNFITCLDCKNQWK 339
>gi|367020002|ref|XP_003659286.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
gi|347006553|gb|AEO54041.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
Length = 309
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 157/358 (43%), Gaps = 70/358 (19%)
Query: 23 GVSSGGPEVSRCVDALKRLKSFPV-TYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDI 81
++S P V V L+ LKS P T + L ST+ G + L +P + I +AS ++
Sbjct: 16 AIASDPPSV--VVGLLEELKSVPAPTEEQLRSTKAGVLVGRLRHNPNKDIARLASEIVSK 73
Query: 82 WKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEK 141
W+K V D+ K K +K K+E+ K+E+
Sbjct: 74 WRKSV--------------------------DAAKEAKKRKLEQSKLEQS------KLEQ 101
Query: 142 TGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKL--- 198
+ S + K T+ DS +PS P +G
Sbjct: 102 SKSPT-------SKSPTSKDSPA--------------PAPSPSYSTPYEGDPEKRHFKTD 140
Query: 199 -TQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGR 257
+ + + +RD +L N L+ +E+ EE++ A + AV ++ +
Sbjct: 141 NVDISRTGNKARDGSIGVLYNGLAYRRTESIEEVLQHAMAIEAAAFAVYKDTPEYRN--- 197
Query: 258 STGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKE 317
K R +M +++ + N +L +RVL GE+ P++ V M+ EE+ASD ++ + ++
Sbjct: 198 -------KIRGLMTSLKRKDNAELGRRVLDGEIPPDKFVVMTDEELASDAQRERDRALER 250
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + + Q + + +C +CG++K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 251 ENMLKAQVPMAQKSISVDLQCGKCGKKKVSYSQAQTRSADEPMTTFCECTVCGHRWKF 308
>gi|429855994|gb|ELA30929.1| transcription elongation factor s-ii [Colletotrichum
gloeosporioides Nara gc5]
Length = 300
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 11/171 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS RD ELL N L+ ++ + D + AV+VE+ F K K
Sbjct: 139 DSVRDACIELLYNGLAYRST---------ASVADVLAKAVAVEAAAFSHFKGVGAPYKEK 189
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI-KEKALFECQ 324
RS+ N++ + N +L V+ G++TP+R V M+ EE+ S E QR+ EN+ +E+ + + Q
Sbjct: 190 VRSLFSNLKVKTNKELGVNVMEGKITPDRFVAMTQEELKSAE-QRKKENLLQEENMKKAQ 248
Query: 325 RGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D C +C Q+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 249 VPMAEKSISDALTCGKCKQKKVSYSQAQTRSADEPMTTFCECTVCGNRWKF 299
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 18/131 (13%)
Query: 193 IATPKLTQLIKCNDSSRDKIRELLANALSKVTSEA-DEEIIDEV-NACDPIRVAVSVESV 250
+ P + + K DS RDK+ E+L ++L+KV +E D E+ V CDP VAVSVES
Sbjct: 101 VKIPTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESA 160
Query: 251 MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR 310
M SI+FN+ D NPDLR++VL+GE++ ERLV M +EM S++ Q+
Sbjct: 161 M----------------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQK 204
Query: 311 QIENIKEKALF 321
+++ IKE+A F
Sbjct: 205 EVQRIKERARF 215
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 3 QELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFP--VTYDVLVSTQVGKRL 60
+E +ELF+AA +AA S + G S PEV R VDA+ RLK P + DV+ T +GK L
Sbjct: 4 REFLELFEAALRAAKS--VKGAESS-PEVLRFVDAMNRLKEAPKSLVCDVVCKTSMGKGL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
H KI+ L D+W KI ++ T K + + K K DKV
Sbjct: 61 GFFIDHKNPKIRSEGRILRDLWMKIHYASGREKSRDRETPVKIPTHSTMKKTGDSKRDKV 120
Query: 121 QKTSAVKVEKVST 133
+ + KV+T
Sbjct: 121 HEILQSSLAKVAT 133
>gi|342878267|gb|EGU79622.1| hypothetical protein FOXB_09905 [Fusarium oxysporum Fo5176]
Length = 315
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 10/174 (5%)
Query: 202 IKCNDSS-RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTG 260
+K DSS R+ L+ N L+ ++ + ++I AV+VE + K T
Sbjct: 141 VKRTDSSVRNSCIGLIYNGLAYRSTATENDVITR---------AVAVEHAAYTKFKGETP 191
Query: 261 AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
K K RS+ N++++ N +L + VL GE+T E+ V M+ +E+ S+E++++ ++++ +
Sbjct: 192 DYKKKIRSLFTNLKNKSNRELGRSVLSGEITAEKFVIMTDDELKSEEQRKKELELEKENM 251
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ Q + ++ +C RC +++ +Y Q QTR+ADEPMTT+ C+ C RWK
Sbjct: 252 KKAQVPMAEKSISESLECGRCKKKQVSYTQAQTRAADEPMTTFCECMACGHRWK 305
>gi|156564607|gb|ABU80627.1| transcription elongation factor TFIIS [Artemia franciscana]
Length = 108
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS + N++ N LR VL G V+ +L M+PEEMAS E + + ++ + + Q
Sbjct: 1 RSRIMNLKS--NNMLRLNVLTGAVSASKLSKMTPEEMASVEMKALRDKFVKEGIEDSQLA 58
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD KC +C +R CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 59 VVEGTQTDLLKCGKCHKRNCTYNQLQTRSADEPMTTFVLCNECGHRWKFC 108
>gi|402086070|gb|EJT80968.1| transcription elongation factor S-II [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 295
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 207 SSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
++RD I LL N L+ ++ ++I+ + A+ VES F++ T + +
Sbjct: 137 ATRDNIIGLLYNGLAYMSYAPIDDILVK---------AIEVESAAFKEYNGETADYRTQM 187
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS+ N++ N +L KRV G++ + V M+ +E+ SD +++ E ++++ + + Q
Sbjct: 188 RSLFSNLK--ANRELAKRVFAGDIATAKFVKMTSDELKSDHLKKKEEALEKENMKKAQVP 245
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ +D +C +C Q+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 246 MVERSISDALECGKCKQKKVSYTQAQTRSADEPMTTFCECTVCGNRWKF 294
>gi|361130396|gb|EHL02209.1| putative Transcription elongation factor S-II [Glarea lozoyensis
74030]
Length = 411
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 9/167 (5%)
Query: 208 SRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYR 267
+RD L+ N L+ ++ + ++I + A+ VE +E + K R
Sbjct: 141 TRDACIGLIYNGLAFMSDASPTQVIAK---------AMEVEKAAYESHKGDNSDYRAKLR 191
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ N++++ N +L +VL G++ P + V M+ +E+ S +R + + + + + Q
Sbjct: 192 SLFQNLKNKDNRELGIQVLSGDILPSKFVVMTHDELKSAKRIEEDKKLNYENMKMAQVPM 251
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ +D +C RCGQ+K +Y Q QTRSADEPMTT+ C C RWK
Sbjct: 252 AEKSISDALRCGRCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRWK 298
>gi|387593442|gb|EIJ88466.1| transcription elongation factor A [Nematocida parisii ERTm3]
gi|387597099|gb|EIJ94719.1| transcription elongation factor A [Nematocida parisii ERTm1]
Length = 164
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 258 STGAEK-LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIK 316
ST AE + +R+ N++D + L V G + E+ + M+ +EM S E + I
Sbjct: 46 STRAEYGMLFRTKYLNLKDASHKWLCTSVYNGVLAIEKFIAMTGDEMRSKELKELEAKIF 105
Query: 317 EKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
++AL + + A TD F C++C QRKCTY Q+QTRSADEPMTTYV CV C WKFC
Sbjct: 106 QRALLD-TTIAQQEAETDIFFCTKCKQRKCTYRQLQTRSADEPMTTYVHCVVCKNNWKFC 164
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 260 GAEKLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI 315
G +KY+ S + N+ D KNPDLRK G + P+ L M+ EEMASDE + +N+
Sbjct: 40 GNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDELKEMHKNL 99
Query: 316 KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+++A+ E Q D C++C ++ CT Q+Q SA EPMTT+V C C + KF
Sbjct: 100 RKEAIREHQMAKTGGTQPDSLTCAKCKKKNCTSTQVQACSAGEPMTTFVDCNECGNQQKF 159
Query: 376 C 376
C
Sbjct: 160 C 160
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 23/130 (17%)
Query: 193 IATPKLTQLIKCNDSSRDKIRELLANALSKVTSEA-DEEIIDEVNACDPIRVAVSVESVM 251
+ P + + K DS RDK+RE+L +L+KV +E D E+ V ACDP VA+SVES M
Sbjct: 101 VKIPTDSTIKKTGDSKRDKVREILQTSLAKVATEVVDTEMKTRVTACDPWVVAISVESAM 160
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQ 311
FE NPDLR++VL+GE+ ERLVTM +EM S++ Q++
Sbjct: 161 FE----------------------SNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKE 198
Query: 312 IENIKEKALF 321
++ IKE A F
Sbjct: 199 VQRIKENARF 208
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 3 QELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFP--VTYDVLVSTQVGKRL 60
QE +ELFDAA +AA S + GV + PEVSR VDA+ RLK P + DV+ +T +GK L
Sbjct: 4 QEFLELFDAALRAAKS--VKGVKNS-PEVSRFVDAMNRLKEAPESLACDVVCTTSMGKGL 60
Query: 61 RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGDKSSVTTGVVKPDSGKIDKV 120
R H +I+ L D+W KI+ ++ T K + + K K DKV
Sbjct: 61 RFFKDHKNPQIRSEGKLLWDLWTKIIHASGREKSRDRDTPVKIPTDSTIKKTGDSKRDKV 120
Query: 121 QKTSAVKVEKVST 133
++ + KV+T
Sbjct: 121 REILQTSLAKVAT 133
>gi|401422690|ref|XP_003875832.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492072|emb|CBZ27346.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 337
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 75/114 (65%), Gaps = 6/114 (5%)
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIE-NIKEKA----L 320
+++++FNI+D KN +LR++V+ GE+ ERLVTM E+A+ E +R IE I+E++ L
Sbjct: 223 FQTLLFNIKDTKNGELRRKVMEGELLVERLVTMDDLELANPELRRHIEEKIEERSKDTNL 282
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E ++ T+ + FKC CG R ++ Q QTRS DEPMT +TC C+ +W+
Sbjct: 283 SEIRKAMR-TSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 335
>gi|378755040|gb|EHY65067.1| transcription elongation factor A [Nematocida sp. 1 ERTm2]
Length = 164
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
+R+ N++D N L V G + ++ + M+ E+M S E + I ++AL +
Sbjct: 55 FRTKYLNLKDASNKWLCTSVYNGVLEIDKFIAMTGEDMKSKELKELEAKIFQRALLD-TT 113
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+ A TD F C++C QRKCTY Q+QTRSADEPMTTYV CV C WKFC
Sbjct: 114 IAQQEAETDIFFCTKCKQRKCTYRQLQTRSADEPMTTYVHCVVCKNNWKFC 164
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 19/126 (15%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K R+++FN++ KN LR RV+LG+VTPERLV M+ EE+ +DE+ + IE+ K+L E +
Sbjct: 271 KVRTLVFNLK--KNGPLRDRVILGQVTPERLVKMTSEELQTDEKAKAIEDTV-KSLQESR 327
Query: 325 RGGEATATTDQ----------------FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVN 368
R A D+ F C RC K T Q QTRSADEPMT +V C+N
Sbjct: 328 RLDWDQANEDKINDMCGIKGDLKNASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVLCLN 387
Query: 369 CSKRWK 374
C KRWK
Sbjct: 388 CGKRWK 393
>gi|389637312|ref|XP_003716294.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
gi|351642113|gb|EHA49975.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
Length = 304
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
+ +++RD I L+ N L+ + + I+ + +V +E F T
Sbjct: 142 RTGNTTRDNIIGLIYNGLAFKSYAPIDAILAK---------SVEIEQAAFVAYKGDTAEY 192
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++ N DL K V G + + V M+ +E+ S++ ++Q E + ++ + +
Sbjct: 193 RNKMRSLFSNLKS--NRDLAKGVFSGNIAASKFVVMTSDELKSNDLRKQEEELAKENMKK 250
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + +D +CS+C Q+K +Y Q QTRSADEPMTT+ C C RWKF
Sbjct: 251 AQVPMAERSISDALECSKCKQKKVSYTQAQTRSADEPMTTFCECTVCGNRWKF 303
>gi|346321715|gb|EGX91314.1| transcription elongation factor s-ii [Cordyceps militaris CM01]
Length = 303
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Query: 260 GAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD-ERQRQIENIKE 317
GA+ K K RS+ N++++ N L V+ E+ PER V M+ +++ SD +R+++IE KE
Sbjct: 186 GADYKKKIRSLFTNLKNKSNRALGVSVMGSEIPPERFVAMTDDDLKSDDQRKKEIELEKE 245
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + Q + +D +C +C Q+K +Y Q QTRSADEPMTT+ C+NC RWKF
Sbjct: 246 N-MKKAQVPMAEKSISDSLECGKCKQKKVSYTQAQTRSADEPMTTFCECMNCGNRWKF 302
>gi|154338127|ref|XP_001565288.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062337|emb|CAM42195.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 329
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 6/114 (5%)
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIEN-----IKEKAL 320
+++++F+I+D KN +LR++V+ GE+ ERLVTM E+A+ E ++QIE K+ L
Sbjct: 215 FQTLLFSIKDSKNGELRRKVVEGELLVERLVTMDDRELANPELRKQIEEKMEERSKDTNL 274
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E R T+ + FKC CG R ++ Q QTRS DEPMT +TC CS +W+
Sbjct: 275 SEI-RKAMRTSNSTLFKCHVCGARDSSWEQRQTRSGDEPMTVIITCNKCSTQWR 327
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 75/321 (23%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIVIEETTRN 93
+D LK LK+ P+T ++L ST++G + + K E++ +A +L+ WKK++
Sbjct: 4 LDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL------- 56
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
+G + +K +D+ +K A+ + A + E T S + V
Sbjct: 57 --DGPSTEKD-------------LDEKKKEPAITSQNSPEA---REESTSSGN----VSN 94
Query: 154 EKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIR 213
K ETN + + +APS +DS R K R
Sbjct: 95 RKDETNA-----------RDTYVSSFPRAPST-------------------SDSVRLKCR 124
Query: 214 ELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
E+LA AL + ADEE + +E +++++ + K + RS
Sbjct: 125 EMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSR 173
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N++D KNP+LRK VL G + P+ M+ EEMASDE + +N+ ++A+ E Q
Sbjct: 174 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTG 233
Query: 330 TATTDQFKCSRCGQRKCTYYQ 350
TD F C +C ++ CTY Q
Sbjct: 234 GTQTDLFTCGKCKKKNCTYTQ 254
>gi|300120315|emb|CBK19869.2| unnamed protein product [Blastocystis hominis]
Length = 214
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
+R I FN+ EKN L L GE+ ++L +M+ EEM SD+ +++ E IKE+ Q
Sbjct: 102 HFRDIRFNL--EKNRQLLGDWLFGELESKKLASMTAEEMMSDDVRKERETIKEEMFEAYQ 159
Query: 325 RGGEATATTDQ----FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T ++ FKC RCG K Y Q QTRSADEPMT + C+NC KRW+
Sbjct: 160 TDWYKTHMMNKLSGGFKCRRCGSDKTQYMQKQTRSADEPMTVFFECMNCGKRWR 213
>gi|398015843|ref|XP_003861110.1| transcription elongation factor, putative [Leishmania donovani]
gi|322499335|emb|CBZ34408.1| transcription elongation factor, putative [Leishmania donovani]
Length = 333
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIE-NIKEKA----L 320
+++++FNI+D KN +LR++V+ GE+ ERLVTM E+A+ E ++ IE I+E++ L
Sbjct: 219 FQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSKDTNL 278
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E R T+ + FKC CG R ++ Q QTRS DEPMT +TC C+ +W+
Sbjct: 279 SEI-RKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 331
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K + RS N++D +NP+LR+R++ GE+TP+++ TMS +EMASDE ++ + E+++
Sbjct: 13 KNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEVKKFRRQVSEESIQR 72
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT-YVTCVNCSKRWK 374
Q TD FKC CG+ C Y Q + SAD P+ + +V C++C RWK
Sbjct: 73 RQVPHADGTMTDMFKCENCGRENCCYNQYRGFSADGPIASPFVFCMDCGNRWK 125
>gi|339898310|ref|XP_003392533.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
gi|321399505|emb|CBZ08701.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
Length = 333
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIE-NIKEKA----L 320
+++++FNI+D KN +LR++V+ GE+ ERLVTM E+A+ E ++ IE I+E++ L
Sbjct: 219 FQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSKDTNL 278
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E R T+ + FKC CG R ++ Q QTRS DEPMT +TC C+ +W+
Sbjct: 279 SEI-RKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 331
>gi|157869975|ref|XP_001683538.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
gi|68126604|emb|CAJ04034.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
Length = 333
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIE-NIKEKA----L 320
+++++FNI+D KN +LR++V+ GE+ ERLVTM E+A+ E ++ IE I+E++ L
Sbjct: 219 FQTLLFNIKDSKNGELRRKVVEGELLVERLVTMDDLELANPELRKHIEEKIEERSKDTNL 278
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E R T+ + FKC CG R ++ Q QTRS DEPMT +TC C+ +W+
Sbjct: 279 SEI-RKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQWR 331
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 16/123 (13%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
KYR + FN++ KN +LR+ +L V+ ++LV M+ EE+A++E++ QIE +++ A F+
Sbjct: 185 KYRQLSFNLK--KNGELRQNLLDDNVSGDQLVKMTAEELATEEKRAQIEKLRDDA-FQEA 241
Query: 325 RGGEATATTDQ-------------FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
R A A D+ F C RC K + Q QTRSADEPMT +V C NC
Sbjct: 242 RLDWAEANHDKIQKQTGTEGTKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCGN 301
Query: 372 RWK 374
RWK
Sbjct: 302 RWK 304
>gi|440467322|gb|ELQ36551.1| transcription elongation factor S-II [Magnaporthe oryzae Y34]
Length = 306
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
+ +++RD I L+ N L+ + + I+ + +V +E F T
Sbjct: 142 RTGNTTRDNIIGLIYNGLAFKSYAPIDAILAK---------SVEIEQAAFVAYKGDTAEY 192
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++ N DL K V G + + V M+ +E+ S++ ++Q E + ++ + +
Sbjct: 193 RNKMRSLFSNLKS--NRDLAKGVFSGNIAASKFVVMTSDELKSNDLRKQEEELAKENMKK 250
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + +D +CS+C Q+K +Y Q QTRSADEPMTT+ C C RWK
Sbjct: 251 AQVPMAERSISDALECSKCKQKKVSYTQAQTRSADEPMTTFCECTVCGNRWKL 303
>gi|290994184|ref|XP_002679712.1| predicted protein [Naegleria gruberi]
gi|284093330|gb|EFC46968.1| predicted protein [Naegleria gruberi]
Length = 116
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
R++ N+ N D R V + E+L M ++MAS E+Q++ ++E+ L
Sbjct: 8 RTLSRNLNASNNDDFRSNVYHSIIPIEQLPIMKVQDMASKEKQKENALLQERKLHNSMVA 67
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
A + F+C +C + +CT+Y+MQTRSADEPMT ++TC++C RWK
Sbjct: 68 KPAAVESSMFRCGKCKKTQCTFYEMQTRSADEPMTAFITCLSCGNRWK 115
>gi|326436982|gb|EGD82552.1| hypothetical protein PTSG_03204 [Salpingoeca sp. ATCC 50818]
Length = 269
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 231 IIDEVNACDPIR-------VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRK 283
II + + +P R VA VE +F K K + RS +++E +
Sbjct: 122 IIRRIVSLNPGRSQKSVADVACKVEEAIFNKFRNDGDPYKKECRSRANYLKNE----ILD 177
Query: 284 RVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQ 343
+++ GE+TPE+ T + +++ S+E +R+ E E+AL + G + T+Q KC +CG+
Sbjct: 178 KLIAGELTPEQFATQAEQKLVSEEDRRETEQHLEQALRDKNPGQKMGNRTNQLKCGKCGK 237
Query: 344 RKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
YY++Q R+ADEPMT TC+ C RW+
Sbjct: 238 NDVEYYEVQLRAADEPMTVIATCIKCGHRWR 268
>gi|440479245|gb|ELQ60026.1| transcription elongation factor S-II [Magnaporthe oryzae P131]
Length = 275
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 203 KCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
+ +++RD I L+ N L+ + + I+ + +V +E F T
Sbjct: 111 RTGNTTRDNIIGLIYNGLAFKSYAPIDAILAK---------SVEIEQAAFVAYKGDTAEY 161
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
+ K RS+ N++ N DL K V G + + V M+ +E+ S++ ++Q E + ++ + +
Sbjct: 162 RNKMRSLFSNLKS--NRDLAKGVFSGNIAASKFVVMTSDELKSNDLRKQEEELAKENMKK 219
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
Q + +D +CS+C Q+K +Y Q QTRSADEPMTT+ C C RWK
Sbjct: 220 AQVPMAERSISDALECSKCKQKKVSYTQAQTRSADEPMTTFCECTVCGNRWKL 272
>gi|298711796|emb|CBJ32824.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 371
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 163/385 (42%), Gaps = 73/385 (18%)
Query: 30 EVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKIV--- 86
+V R D L L VT VL ++VG + L KH E++ A L+ WK++
Sbjct: 22 DVERIADVLGSLGKVEVTLAVLQESKVGATVSKLKKHADEEVSKSAKALVKKWKRVAEAS 81
Query: 87 -----------IEETTRNKKNGSTGDKSSVTTGVVKPDSGK--------IDKVQKTSAVK 127
T GS G S + V SG +K +A
Sbjct: 82 GVQGAPAAAAGAAGKTGKSPPGSAGKGSGASKQEVPSPSGGGGAGPSSGTNKAAAAAAAA 141
Query: 128 VEKVSTAETVK--VEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSV 185
+ +K V KT + S SE V + + +T+G S + ++V+ I+ +++ AP
Sbjct: 142 GGATAATSPLKGAVGKTATSSTSEAVPLSR-QTSGSSTSELCTTLEVDSILSDDEPAPL- 199
Query: 186 RKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
R K+R + + L +SE DE I RVA
Sbjct: 200 -----------------------RLKMRRKMFDTLLLGSSE-DERI-------PTARVAK 228
Query: 246 SVESVMFEKLGR-STGAEKL-KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM-SPEE 302
VE M E S A L K R ++FN++ KN LR+ V G V P+RLV M S E
Sbjct: 229 GVECAMNENNPYLSKKASYLDKARQLVFNLK--KNDQLRQDVREGLVEPQRLVAMTSTEL 286
Query: 303 MASDERQRQIENIKEKA---LFECQRGGE--------ATATTDQFKCSRCGQRKCTYYQM 351
MA D+R+ + + E+ + + E T F+C RC K TY Q
Sbjct: 287 MAKDKREAMDKAVSERTEARMLDWYDKNEDKINKQCGIKETDGMFECGRCKSTKTTYTQK 346
Query: 352 QTRSADEPMTTYVTCVNCSKRWKFC 376
QTRSADEPMTT+VTC NC RWKFC
Sbjct: 347 QTRSADEPMTTFVTCSNCKNRWKFC 371
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 13/178 (7%)
Query: 179 EKQAPSVRKPSQGTI-ATPKLTQL----IKCNDSSRDKIRELLANALSKVTSEADEEIID 233
E + PS ++P + + P++T + C D+ R+K RE+LA AL D + +
Sbjct: 80 EAKDPSRKRPELPRMPSAPRITTFPPAPVTC-DAVRNKCREMLAAAL-----RTDHDHMA 133
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
C+ + + +E +F +G + K + RS + N++D KNPDLR+ VL G +TP+
Sbjct: 134 VGADCEGL--SAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQ 191
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQM 351
++ M+ EEMASDE + + + ++A+ E Q TD F C +C ++ CTY Q+
Sbjct: 192 QIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRRKNCTYTQV 249
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPR-EKIQIVASNLLDIWKKIV 86
VD L+ LK+ PVT ++L ST+VG + L K E++ +A +L+ WKK++
Sbjct: 2 VDLLRELKAMPVTLNLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 54
>gi|169806152|ref|XP_001827821.1| transcription elongation factor S-II [Enterocytozoon bieneusi H348]
gi|161779269|gb|EDQ31292.1| transcription elongation factor S-II [Enterocytozoon bieneusi H348]
Length = 180
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 280 DLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCS 339
D+ ++ GE+T + V +S E+M S++++ + + I E ++ R A T FKC
Sbjct: 86 DICNKIYNGEITIKEFVELSSEDMKSEKQKLEEKKIVEDSI-NSSRQACTEAETTMFKCG 144
Query: 340 RCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
RC + +CTYYQ+QTRS DEPMTT+V C NC WKF
Sbjct: 145 RCQKNQCTYYQLQTRSCDEPMTTFVRCTNCGHNWKF 180
>gi|281207318|gb|EFA81501.1| hypothetical protein PPL_05490 [Polysphondylium pallidum PN500]
Length = 141
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 6/76 (7%)
Query: 298 MSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSAD 357
M+ +E+ +ER++ ++ KE A ATTDQF+C +C QRKCTY+Q+QTRSAD
Sbjct: 1 MANKEL-QEERKKMLKFSKEAATL-----SRDAATTDQFQCGKCKQRKCTYFQLQTRSAD 54
Query: 358 EPMTTYVTCVNCSKRW 373
EP+TT+VTCVNC+ RW
Sbjct: 55 EPLTTFVTCVNCNNRW 70
>gi|440494389|gb|ELQ76770.1| Transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein Sp1 [Trachipleistophora hominis]
Length = 181
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 181 QAPSVRKPSQGTIATPK-LTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACD 239
Q S + +G I+T + L+Q K D SRD+ L II++V+
Sbjct: 3 QIASDQNTKKGEISTQEALSQFAK-GDQSRDRTTSLFYEVFV--------SIINDVDKLR 53
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
R+A +E +++ S+ + RS N++D+ N DL + G + + MS
Sbjct: 54 AARLASDLEQEIYDNKIVSS-----QIRSKYLNLKDKSN-DLCVGIYEGRIGVHEFLLMS 107
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
+EM S R R +N K+ E + + TD F C +C QRKC Y Q+QTRSADEP
Sbjct: 108 MDEMKSKAR-RSSDNDLIKSSIEGSQIAQMEVETDIFFCFKCKQRKCRYRQIQTRSADEP 166
Query: 360 MTTYVTCVNCSKRWKF 375
MTTYV C C WKF
Sbjct: 167 MTTYVFC-KCGNTWKF 181
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 87/152 (57%), Gaps = 7/152 (4%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R+K RELL AL + D + D +A +E ++++ + K +
Sbjct: 138 DNVRNKCRELLVAALQ---TGGDHLTM----GVDCQHLAAQIEEEIYQEFKSTETKYKSR 190
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D+KNP+LR+ VL G ++P+R+ +MS EEMAS E ++ E + ++++ E Q
Sbjct: 191 LRSRISNLKDQKNPELRRNVLCGNISPQRIASMSAEEMASAELKQIREALTKESIREHQL 250
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSAD 357
TD F C+ C + C+Y Q++TR+++
Sbjct: 251 SKVGGTETDMFICNNCHGKSCSYTQVETRASE 282
>gi|332244802|ref|XP_003271560.1| PREDICTED: transcription elongation factor A protein 3 [Nomascus
leucogenys]
Length = 295
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
EMASDE + + ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMT
Sbjct: 221 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 280
Query: 362 TYVTCVNCSKRWKFC 376
T+V C C RWKFC
Sbjct: 281 TFVLCNECGNRWKFC 295
>gi|167535081|ref|XP_001749215.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772368|gb|EDQ86021.1| predicted protein [Monosiga brevicollis MX1]
Length = 286
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 189 SQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVE 248
S G A L +C+D R+K RELL LS A + D NA VA +E
Sbjct: 111 SDGKAAQTVLEPHHRCDDPVRNKFRELLCKKLS-----ASIKPEDTANAG---MVAADIE 162
Query: 249 SVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV-TPERLVTMSPEEMASDE 307
+ F K S + YR++ + R + D + L+ EV PE V +S + S E
Sbjct: 163 NACFIKHSDSASED---YRALTRS-RIQYCKDWIRGALMQEVMAPEEFVKLSGSALLSKE 218
Query: 308 RQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCV 367
+Q ++ EKA + A+TDQ C RC R +Y ++QTRSADEPMT + +C
Sbjct: 219 QQDVLQKDLEKASHDRALAVAEGASTDQLVCPRCKARDASYTEVQTRSADEPMTIFASCK 278
Query: 368 NCSKRWK 374
C KRW+
Sbjct: 279 KCGKRWR 285
>gi|313768224|ref|YP_004061904.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
gi|312598920|gb|ADQ90944.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
Length = 171
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 257 RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE-RQRQIENI 315
+ T K K+ SI +++D NP L+K ++ + ++ M PEE+ D +QIE
Sbjct: 54 KYTSIYKQKFLSIQKSLKD--NPKLKKSIIEKRLKSHDVINMRPEELCPDGLYAKQIETK 111
Query: 316 KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K + + E FKC RC K TYYQ+QTRSADEPMTT+V+C+NC + WK
Sbjct: 112 IHKEIRKEYLSREIKNQDGFFKCGRCKSMKTTYYQLQTRSADEPMTTFVSCLNCDRNWK 170
>gi|221041960|dbj|BAH12657.1| unnamed protein product [Homo sapiens]
Length = 117
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
+EMASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPM
Sbjct: 42 QEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPM 101
Query: 361 TTYVTCVNCSKRWKFC 376
TT+V C C RWKFC
Sbjct: 102 TTFVVCNECGNRWKFC 117
>gi|219120375|ref|XP_002180927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407643|gb|EEC47579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 75/147 (51%), Gaps = 20/147 (13%)
Query: 244 AVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEM 303
AV +E+ + EK G K RS+ FN++ KN L + V+LG+V+ LV+ + E++
Sbjct: 180 AVEIEASLTEKFRDRKGYTD-KARSLAFNLK--KNQSLCQEVILGQVSASELVSFTSEQL 236
Query: 304 ASDERQRQIENIKEKALFECQRGGEATATTDQ----------------FKCSRCGQRKCT 347
AS E RQ + K L + +R A D+ F C RC K T
Sbjct: 237 ASAE-TRQARATEAKKLIDSRRLDWDQANEDKINEMCGIKGDLLNASLFTCGRCKSVKTT 295
Query: 348 YYQMQTRSADEPMTTYVTCVNCSKRWK 374
Q QTRSADEPMT +V C+NC RWK
Sbjct: 296 STQKQTRSADEPMTVFVLCLNCGNRWK 322
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 146/350 (41%), Gaps = 85/350 (24%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++ T
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPRTTK 86
Query: 94 KKNGSTGDKSSVTTGV----VKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSE 149
+ + G+ KP++G +K K + SRS
Sbjct: 87 GEREAREKAKKKEKGLGSSGWKPEAGLSPPRKKEGG----------EPKTRRDSVDSRSS 136
Query: 150 TVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKC---ND 206
T K+ + S R + E + PS PS T A P + L C D
Sbjct: 137 TTSSPKRPSLERSNSSRSKV--------ETPKTPS--SPSTPTFA-PAVCLLASCYLTGD 185
Query: 207 SSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
S RDK E+L+ AL +A+++ D CD ++A +E+ ++++L + + +
Sbjct: 186 SVRDKCVEMLSAAL-----KAEDDFKDYGVNCD--KLASEIETHIYQELKSTDMKYRNRV 238
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS + N++D +NP LR+ VL G ++PE + M+ E
Sbjct: 239 RSRISNLKDPRNPGLRRNVLSGTISPELIAKMTAE------------------------- 273
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
+QTRSADEPMTT+V C C RWKFC
Sbjct: 274 ------------------------VQTRSADEPMTTFVLCNECGNRWKFC 299
>gi|297282476|ref|XP_001102747.2| PREDICTED: transcription elongation factor A protein 3-like isoform
2, partial [Macaca mulatta]
gi|402853350|ref|XP_003891359.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 105
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
EMASDE + + ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMT
Sbjct: 31 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 90
Query: 362 TYVTCVNCSKRWKFC 376
T+V C C RWKFC
Sbjct: 91 TFVLCNECGNRWKFC 105
>gi|378706130|gb|AFC34931.1| hypothetical protein OtV6_023c [Ostreococcus tauri virus RT-2011]
Length = 171
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 7/121 (5%)
Query: 257 RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIK 316
+ +G K K+ I N+++ +P L+ +L ++ + ++ M PE++ D ++ ++
Sbjct: 54 KYSGIYKQKFLQIQHNLKN--SPVLKGWILDKKIKTKDVIDMRPEDLWPDGPYAKM--ME 109
Query: 317 EKALFECQRGGEATATTDQ---FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
E+ + E ++ A +Q F C RC +K TYYQ+QTRSADEPMTT+VTC+NC + W
Sbjct: 110 ERIIKEMRKAYLAQEVKNQEGFFTCGRCKSKKTTYYQLQTRSADEPMTTFVTCLNCDRNW 169
Query: 374 K 374
K
Sbjct: 170 K 170
>gi|323450413|gb|EGB06294.1| hypothetical protein AURANDRAFT_29341 [Aureococcus anophagefferens]
Length = 275
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 14/118 (11%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K R + FN++ KNPDLR RV G VTP L +MS +E+A+ E Q + K + E Q
Sbjct: 165 KLRQLSFNLK--KNPDLRARVAGGGVTPAELCSMSVDELATQEVQAE-----RKKMAEFQ 217
Query: 325 RGGEATATTDQ-------FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + + C +C K + Y+ QTRS DEPMT + C +C RW+F
Sbjct: 218 HDARSLDWDKKNRDRKTMYPCGKCKSTKVSNYEKQTRSGDEPMTQFFECADCGNRWRF 275
>gi|357289731|gb|AET73044.1| transcription elongation factor A [Phaeocystis globosa virus 12T]
gi|357292531|gb|AET73867.1| transcription elongation factor A 1 [Phaeocystis globosa virus 14T]
Length = 173
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD--ERQRQIENIKEKALFE 322
K + I+ NI D P+L ++ + + M+ EE+ D E I+ +K++ F
Sbjct: 68 KLKMIINNITD---PELLDKITSKTIKAHLIAFMTHEELRPDLWEELIAIKKMKDENKF- 123
Query: 323 CQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ A+TD+F C +C + KCTYYQ+QTRSADE MTT+VTC+ C RWK
Sbjct: 124 ---SPKIEASTDEFTCFKCKENKCTYYQLQTRSADESMTTFVTCIPCGNRWK 172
>gi|296207010|ref|XP_002750408.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Callithrix jacchus]
gi|332807943|ref|XP_001165502.2| PREDICTED: transcription elongation factor A protein 3-like isoform
2, partial [Pan troglodytes]
Length = 75
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
EMASDE + + ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMT
Sbjct: 1 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 60
Query: 362 TYVTCVNCSKRWKFC 376
T+V C C RWKFC
Sbjct: 61 TFVLCNECGNRWKFC 75
>gi|9857927|gb|AAG00938.1|AF272555_1 transcription elongation factor TFIIS [Moneuplotes crassus]
Length = 328
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N+ + DK+R + L K+ +++E N +++ +E+ + +LG
Sbjct: 163 NNETEDKVRNGIRKGLEKLLCKSNE------NPKKCKALSIKIENSVVLRLGTHLKEYTN 216
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RSI+ N+ +++ + R +++ G TP+ L M+P + D +++ KE + + +
Sbjct: 217 KCRSIIANL--QRSDEFRSKIINGIFTPDDLAAMNPRDFLEDSLKKKRAK-KETRIIDSK 273
Query: 325 RGGEATATTD----QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
R A + + C +C +K T+Y+ QTRSADEPMTT+V C+ CS KF
Sbjct: 274 RSDYILANSKIKEGMYTCEKCKSKKTTFYEQQTRSADEPMTTFVQCLMCSHNMKF 328
>gi|9857929|gb|AAG00939.1|AF272556_1 transcription elongation factor TFIIS [Moneuplotes crassus]
Length = 324
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 13/175 (7%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N+ + DK+R + L K+ +++E N +++ +E+ + +LG
Sbjct: 159 NNETEDKVRNGIRKGLEKLLCKSNE------NPKKCKALSIKIENSVVLRLGTHLKEYTN 212
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RSI+ N+ +++ + R +++ G TP+ L M+P + D +++ KE + + +
Sbjct: 213 KCRSIIANL--QRSDEFRSKIINGIFTPDDLAAMNPRDFLEDSLKKKRAK-KETRIIDSK 269
Query: 325 RGGEATATTD----QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
R A + + C +C +K T+Y+ QTRSADEPMTT+V C+ CS KF
Sbjct: 270 RSDYILANSKIKEGMYTCEKCKSKKTTFYEQQTRSADEPMTTFVQCLMCSHNMKF 324
>gi|357542240|gb|AET85000.1| transcription elongation factor [Micromonas pusilla virus SP1]
Length = 169
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 23/146 (15%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
VN C P E++ F K+ +S K+ S+ NI+ +NP L+ ++ ++
Sbjct: 40 VNTCGP----TVWENINFTKMYKS------KFLSLQSNIK--QNPKLKSDLVEKKLKTFD 87
Query: 295 LVTMSPEEMASDERQRQI------ENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTY 348
V M PE++ D ++ E ++++ L + + E F C+RC +K TY
Sbjct: 88 FVNMRPEKLWPDGPYAKVMEVRIHEEMRKEYLTKEMKNQEGF-----FTCNRCKSKKTTY 142
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
YQ+QTRSADEPMTT+V+C+NC K WK
Sbjct: 143 YQLQTRSADEPMTTFVSCLNCDKNWK 168
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 64/349 (18%)
Query: 35 VDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREK-IQIVASNLLDIWKKIVIEETTRN 93
+D LK+L S ++ +L +T++G + + KH +K + +A L+ WK+++
Sbjct: 8 LDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL------- 60
Query: 94 KKNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQV 153
S G P G+ K ++ + K + + ++ K E S R +
Sbjct: 61 ---DSPG-----------PPKGEKGKEREKAKKKEKGLDCSD-WKPEAGLSPPRKKR--- 102
Query: 154 EKKETNGDSVMDRGEAVK------VEKIIEEEKQAPSVRKPSQGTIAT--PKLTQLIKC- 204
E +T DSV + A VE+ + +A S R PS T + L C
Sbjct: 103 EDPKTRRDSVDSKSSATSSPKRPSVERSNSSKSKAESPRTPSSPLTPTFASSICLLAPCY 162
Query: 205 --NDSSRDKIRELLANAL-------------SKVTSEADEEIIDEVNACDPI-RVAVSVE 248
DS RDK E+L+ AL K+ SE ++ I++ C + R+A ++
Sbjct: 163 LTGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHILELCQGCGCLDRLAAPLQ 222
Query: 249 SVMFEKLGRSTGAEKLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+ +ST +KYR S + N++D +NP LR+ VL G ++ + M+ EEMA
Sbjct: 223 EL------KST---DMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMA 273
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
SDE + + ++A+ E Q TTD F+CS+C ++ CTY Q+ T
Sbjct: 274 SDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVWT 322
>gi|388549029|gb|AFK66230.1| transcription elongation factor TFIIS [Ostreococcus lucimarinus
virus OlV3]
Length = 171
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD-ERQRQIEN 314
+ T K K+ + +NI++ +P L+ +L +V ++ M PE++ D ++IE
Sbjct: 53 HKYTNIYKHKFLQLQYNIKN--SPVLKNWILNRKVKSLDVIEMRPEDLWPDGPYAKKIEE 110
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K L + E T F C RC +K +YYQ+QTRSADEPMTT+VTC C + WK
Sbjct: 111 KIHKDLRKAYLTKEMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTFVTCHQCDRNWK 170
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
PS G++ +D R K+RE LA+AL + E E E DP VA V
Sbjct: 396 PSAGSVGN---------DDEVRSKVREQLASALQRALDELKAEGYTEALP-DPAAVAADV 445
Query: 248 ESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
E+ +++ S + K K+RS+ FN+RD NP+LR RVL GE+ P RLVT+ P E+A
Sbjct: 446 ETELYKLHDNSVSKDYKAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARK 505
Query: 307 E-----RQRQIENIKEKALFECQRGGEATA 331
E ++RQ E K L GG+AT
Sbjct: 506 ELSEWRQKRQEEAAKMVFLDAGFHGGDATG 535
>gi|314055114|ref|YP_004063452.1| putative transcription elongation factor TFIIS [Ostreococcus tauri
virus 2]
gi|313575005|emb|CBI70018.1| putative transcription elongation factor TFIIS [Ostreococcus tauri
virus 2]
Length = 171
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD-ERQRQIEN 314
+ T K K+ + +NI++ +P L+ +L +V ++ M PE++ D ++IE
Sbjct: 53 HKYTNIYKHKFLQLQYNIKN--SPVLKNWILNRKVKSLDVIEMRPEDLWPDGPYAKKIEE 110
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K L + E T F C RC +K +YYQ+QTRSADEPMTT+VTC C + WK
Sbjct: 111 KIHKDLRKAYLTREMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTFVTCHQCDRNWK 170
>gi|429965603|gb|ELA47600.1| transcription elongation factor S-II [Vavraia culicis
'floridensis']
Length = 181
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS N++D N DL + G + + MS +EM S R+ ++ E+++ E +
Sbjct: 76 RSKYLNLKDTSN-DLCTGIYEGRIGVHEFLLMSMDEMKSKARRSSDNDLIERSI-EGSQI 133
Query: 327 GEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ TD F C +C QRKC Y Q+QTRSADEPMTTYV C C WKF
Sbjct: 134 AQMEVETDIFFCFKCKQRKCRYRQIQTRSADEPMTTYVFC-KCGNTWKF 181
>gi|297666066|ref|XP_002811364.1| PREDICTED: transcription elongation factor A protein 3-like [Pongo
abelii]
Length = 74
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTT 362
MASDE + + ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSADEPMTT
Sbjct: 1 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMTT 60
Query: 363 YVTCVNCSKRWKFC 376
+V C C RWKFC
Sbjct: 61 FVLCNECGNRWKFC 74
>gi|322511107|gb|ADX06420.1| putative transcription elongation factor TFIIS_C domain-containing
protein [Organic Lake phycodnavirus 2]
Length = 168
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 25/120 (20%)
Query: 265 KYRSIMFNIRDE-------KNPDLRKRVLLG---EVTPERLVTMSPEEMASDERQRQIEN 314
K++ I ++D+ +NP+ K + E+ P+ +++ E++ ++N
Sbjct: 63 KFKQIWHYLKDDHILEKIKQNPNFCKEISFKTEQEIYPDYWNSITEEKIT------HLDN 116
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + A+TD+FKC +C ++CTYYQ+QTRSADEPMTT+VTC++C RWK
Sbjct: 117 ---------KYFPKIKASTDKFKCGKCKSKECTYYQLQTRSADEPMTTFVTCISCGNRWK 167
>gi|322510696|gb|ADX06010.1| putative transcription factor TFIIS_C family protein [Organic Lake
phycodnavirus 1]
Length = 168
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 18/100 (18%)
Query: 278 NPDLRKRVLLG---EVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD 334
+PD K + ++ PE +EM D++ R ++N + + A+TD
Sbjct: 83 DPDFCKNISFKSEQDLYPEYW-----KEMTEDKKTR-VDN---------KYFPKIKASTD 127
Query: 335 QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+FKC +C ++CTYYQ+QTRSADEPMTT+VTC++C RWK
Sbjct: 128 KFKCGKCKSKECTYYQLQTRSADEPMTTFVTCISCGNRWK 167
>gi|312599164|gb|ADQ91187.1| hypothetical protein BpV2_020c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 171
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
Query: 265 KYRSIMFNIRDE--KNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQI--ENIKEKAL 320
+Y+ I+ +P L+KR+L GE+ P+ ++ +S + + ++ ENI++
Sbjct: 56 RYKHTFLKIKHNLIHSPTLKKRILSGELKPKSVLDLSHQGLWPGGPYSKLLEENIRQNM- 114
Query: 321 FECQRGGEATATTD-----QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
++ D F+C+RC K T+YQMQTRSADEPMT +VTC NC+ RWK
Sbjct: 115 ---KKDWVTNMINDPEYKGMFRCNRCKSYKTTFYQMQTRSADEPMTVFVTCHNCNSRWK 170
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A+ +ES +++ + K + R+ + N+RD NP+LR VL+G V P++L +M+ EE
Sbjct: 11 LAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLASMTSEE 70
Query: 303 MASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQM 351
MAS E + E ++ + + Q TD KC +C Q KCTY Q+
Sbjct: 71 MASKEMKELREKYTKETIEDHQMAVTGGTETDLLKCGKCKQNKCTYNQL 119
>gi|163954997|ref|YP_001648101.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
gi|163638446|gb|ABY27805.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
Length = 167
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD-ERQRQIEN 314
R + K K+ + +N+R+ +P L + ++ +V + +V M PEE+ D IE+
Sbjct: 49 HRFSNMYKHKFLQLQYNLRN--SPALNRWIIEKKVKSKDVVDMRPEELWPDGPCATAIED 106
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K L + E T F C RC K +YYQ+QTRSADEPMTT+V+C NC + WK
Sbjct: 107 KIVKDLRKAYLAQEIKDTEGFFTCGRCKSNKTSYYQLQTRSADEPMTTFVSCHNCDRNWK 166
>gi|388548782|gb|AFK65984.1| hypothetical protein OLVG_00230 [Ostreococcus lucimarinus virus
OlV6]
Length = 171
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD-ERQRQIEN 314
+ T K K+ + +N+++ +P L+ +L +V ++ M PE++ D ++IE
Sbjct: 53 HKYTNIYKHKFLQLQYNLKN--SPVLKNWILNRKVKSLDVIEMRPEDLWPDGPYAKKIEE 110
Query: 315 IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K L + E T F C RC +K +YYQ+QTRSADEPMTT+VTC C + WK
Sbjct: 111 KIHKDLRKDYLTKEMNNTEGFFTCGRCKSKKTSYYQLQTRSADEPMTTFVTCHQCDRNWK 170
>gi|342185610|emb|CCC95094.1| putative transcription elongation factor [Trypanosoma congolense
IL3000]
Length = 207
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 22/201 (10%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
E+Q+P++ K +G + KL Q + D+ K + +L L++ DEE + V
Sbjct: 22 EEQSPALHK--EGAPTSSKLIQGRQ-GDARLIKWKTMLCRVLTQGRKVEDEERVSGVAQ- 77
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
RV ++ GRS A+ +R ++ ++ D KN LR+ ++ G ++ E LV M
Sbjct: 78 ---RVVEAIPG------GRSESADT--FRVLLVHMGDAKNEKLRESIIEGVLSVETLVRM 126
Query: 299 SPEEMAS-DERQRQ----IENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
E+ + +ER +Q +E K+ L E ++ T+T F C C R C++ Q QT
Sbjct: 127 KESELLNPEERMKQEAAFLERCKDTDLSEIRKATSTTSTL--FPCPSCKARNCSWSQKQT 184
Query: 354 RSADEPMTTYVTCVNCSKRWK 374
RSADEPMT + C C +W+
Sbjct: 185 RSADEPMTVFCICNVCDHKWR 205
>gi|157875290|ref|XP_001686044.1| transcription elongation factor-like protein [Leishmania major
strain Friedlin]
gi|68129117|emb|CAJ06790.1| transcription elongation factor-like protein [Leishmania major
strain Friedlin]
Length = 473
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 281 LRKRVLLGEVTPERLVTMSPEEMAS-DERQRQIENIKEKALFECQRGGEATATTDQFKCS 339
+R +L GE TP++ + E + E+ RQ + I+EK T FKC
Sbjct: 377 IRDHLLSGEWTPKKYLDQPSEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 436
Query: 340 RCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
RCG+R CT+Y+ QTRSADEP T Y+TC++C W
Sbjct: 437 RCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 470
>gi|313768016|ref|YP_004061447.1| hypothetical protein BpV1_017c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599623|gb|ADQ91644.1| hypothetical protein BpV1_017c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 171
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 13/119 (10%)
Query: 265 KYRSIMFNIRDE--KNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQI--ENIKEKAL 320
+Y+ I+ +P L++R+L GE+ P+ ++ +S + + ++ ENI++
Sbjct: 56 RYKHTFLKIKHNLIHSPTLKERILSGELKPKSVLELSHQGLWPGGPYSKLLEENIRQNM- 114
Query: 321 FECQRGGEATATTD-----QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
++ D F+C+RC K T+YQMQTRSADEPMT +VTC NC+ RWK
Sbjct: 115 ---KKDWVTNMINDPEYKGMFRCNRCKSYKTTFYQMQTRSADEPMTVFVTCHNCNSRWK 170
>gi|146098158|ref|XP_001468341.1| transcription elongation factor-like protein [Leishmania infantum
JPCM5]
gi|134072708|emb|CAM71425.1| transcription elongation factor-like protein [Leishmania infantum
JPCM5]
Length = 473
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 281 LRKRVLLGEVTPERLVTMSPEEMAS-DERQRQIENIKEKALFECQRGGEATATTDQFKCS 339
+R +L GE TP++ + E + E+ RQ + I+EK T FKC
Sbjct: 377 IRDHLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 436
Query: 340 RCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
RCG+R CT+Y+ QTRSADEP T Y+TC++C W
Sbjct: 437 RCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 470
>gi|294887906|ref|XP_002772275.1| DNA-directed RNA polymerase subunit M, putative [Perkinsus marinus
ATCC 50983]
gi|239876350|gb|EER04091.1| DNA-directed RNA polymerase subunit M, putative [Perkinsus marinus
ATCC 50983]
Length = 78
Score = 77.8 bits (190), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 6/79 (7%)
Query: 303 MASDERQRQIENIKEKALFECQ-----RGGEATATTDQFKCSRCGQRKCTYYQMQTRSAD 357
MAS+ + + N + AL ECQ R G A + F+C +C + + TY+QMQTRS+D
Sbjct: 1 MASEAKNQHRANAAKAALEECQSDWAMRHG-AIQKSGMFQCGKCRKSQTTYFQMQTRSSD 59
Query: 358 EPMTTYVTCVNCSKRWKFC 376
EPMTT+VTC+NC +WKFC
Sbjct: 60 EPMTTFVTCLNCGNKWKFC 78
>gi|260665894|ref|YP_003212848.1| hypothetical protein H665_p024 [Ostreococcus tauri virus 1]
gi|260160912|emb|CAY39612.1| hypothetical protein OTV1_024 [Ostreococcus tauri virus 1]
Length = 167
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD-ERQRQIENIKE 317
+ K K+ + +N+R+ +P L + ++ +V + +V M PEE+ D IE+
Sbjct: 52 SNMYKHKFLQLQYNLRN--SPALNRWIVEKKVKSKDVVDMRPEELWPDGPCATAIEDKIV 109
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
K L + E T F C RC K +YYQ+QTRSADEPMTT+V+C NC + WK
Sbjct: 110 KDLRKAYLAQEIKDTEGFFTCGRCKSNKTSYYQLQTRSADEPMTTFVSCHNCDRNWK 166
>gi|119615454|gb|EAW95048.1| transcription elongation factor A (SII), 3, isoform CRA_a [Homo
sapiens]
Length = 79
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 298 MSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSAD 357
M A DE + + ++A+ E Q TTD F+CS+C ++ CTY Q+QTRSAD
Sbjct: 1 MGSASTAHDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSAD 60
Query: 358 EPMTTYVTCVNCSKRWKFC 376
EPMTT+V C C RWKFC
Sbjct: 61 EPMTTFVLCNECGNRWKFC 79
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 17/125 (13%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS----DERQRQIENIKEKAL 320
K RS++FN++ KN LR++V+LG++ E+L M PEE+A+ ER Q E +
Sbjct: 163 KVRSLVFNLK--KNGPLREQVILGQIVTEQLPKMPPEELATAEMNKERNAQAEKLMASRQ 220
Query: 321 FECQRGGEATAT-----------TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ ++ E F C RC K T Q QTRSADEPMT +V C+NC
Sbjct: 221 LDWEKKNEGKINEICGIKGDLLKASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVLCLNC 280
Query: 370 SKRWK 374
RWK
Sbjct: 281 GNRWK 285
>gi|401428110|ref|XP_003878538.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494786|emb|CBZ30089.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 476
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 281 LRKRVLLGEVTPERLVTMSPEEMAS-DERQRQIENIKEKALFECQRGGEATATTDQFKCS 339
+R +L GE TP++ + E + E+ RQ + I+EK T FKC
Sbjct: 380 IRDNLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 439
Query: 340 RCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
RCG+R CT+Y+ QTRSADEP T Y+TC++C W
Sbjct: 440 RCGKRHCTFYEQQTRSADEPTTKYITCLDCKNIW 473
>gi|154344264|ref|XP_001568076.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065410|emb|CAM40841.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 474
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 281 LRKRVLLGEVTPERLVTMSPEEMAS--DERQRQIENIKEKALFECQRGGEATATTDQFKC 338
+R +L GE TP++ + P E+ + E+ RQ + I+EK T FKC
Sbjct: 378 IRDNLLSGEWTPKKYLDQ-PNEVFTTKSEKARQEQRIQEKIKAIEAADNARLNITALFKC 436
Query: 339 SRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
RCG+R CT+Y+ QTRSADEP T Y+TC++C W
Sbjct: 437 GRCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 471
>gi|340058665|emb|CCC53025.1| putative transcription elongation factor [Trypanosoma vivax Y486]
Length = 230
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS-DERQRQ----IENIKEKAL 320
+R ++ NIRD KN +LR ++ G + E LV M+ E+ + +ER+ Q +E K+ L
Sbjct: 117 FRVLLVNIRDTKNEELRSDIIEGRLPVEVLVRMNERELLNPEERKNQEAAFLERSKDTDL 176
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
E +R +T F+C C R C++ Q QTRSADEPMT + C C +W
Sbjct: 177 TEIRRAMATKSTL--FQCPSCKARDCSWTQKQTRSADEPMTVFCHCNVCDTKW 227
>gi|444731638|gb|ELW71990.1| Transcription elongation factor A protein 1, partial [Tupaia
chinensis]
Length = 151
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%)
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
EMASDE + +N+ ++A+ E Q TD F C +C ++ CTY Q+QTRSADEPMT
Sbjct: 43 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 102
Query: 362 TYVTCVNCSKRWK 374
T+V C C RWK
Sbjct: 103 TFVVCNECGNRWK 115
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P+ I P Q+ R +R L + L K ++++ +I +E +A
Sbjct: 889 EKGGPNVHPPAAAAIK-PSADQI-------RQSVRHSLKDILMKRLTDSNLKIPEEKSA- 939
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 940 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 996
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 997 SPEELASKE 1005
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEK-LKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
NA +P +AV +E +FE+ GR TG E + RS+MFN+RD +NP LR RVL V+ E
Sbjct: 140 NALNPSEIAVGIERALFERCGRDTGKEYGVHARSLMFNLRDPQNPTLRARVLHENVSAET 199
Query: 295 LVTMSPEEMASDE----RQRQIENIKEKALF 321
LV M+P E+A+ E R+++ E I E A
Sbjct: 200 LVKMTPAELANKELIEWRKKREEKIGEDAFL 230
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P+ T + P Q+ R +R L + L K +E++ ++ +E A
Sbjct: 1080 EKGVPNVHPPATST-SKPSADQI-------RQSVRHSLKDILMKRLTESNLKVPEEKAA- 1130
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 1131 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 1187
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 1188 SPEELASKE 1196
>gi|448932235|gb|AGE55795.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus MN0810.1]
Length = 184
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 29/194 (14%)
Query: 196 PKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEII---------DEVNACDPIRVAVS 246
PK+++ I S+ ++IR L A ++ T E DE+I V+ C +A++
Sbjct: 4 PKMSKSIYKPVSTPEEIR-LKARSMLLATVE-DEKIAVYLEKASWNHSVDFCKKREIALN 61
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
++ F R+ +K+ S+ +NIR+ PD+ +++ G+ + ++ V P E+ +
Sbjct: 62 WDNFAF----RNIYTQKV--LSVRYNIRNR--PDVLSQMIEGKASIKQFVDAKPHEICPE 113
Query: 307 ERQRQIENIKEKALFECQRGGEA------TATTDQFKCSRCGQRKCTYYQMQTRSADEPM 360
+ E+ ++AL R +A T +C +CG +K +YY++QTRSADEPM
Sbjct: 114 KWAEAFESAAKRAL----RFSDASCMDPETMPDGMLQCKKCGSKKTSYYELQTRSADEPM 169
Query: 361 TTYVTCVNCSKRWK 374
T + C NC RWK
Sbjct: 170 TVFARCHNCPNRWK 183
>gi|310831288|ref|YP_003969931.1| putative transcription elongation factor TFIIS [Cafeteria
roenbergensis virus BV-PW1]
gi|309386472|gb|ADO67332.1| putative transcription elongation factor TFIIS [Cafeteria
roenbergensis virus BV-PW1]
Length = 157
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Query: 250 VMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQ 309
MFE + ++ +K+ +I + NP L + + G++ PE + + PEE+ ++ +
Sbjct: 43 FMFENFYQDKFSDIIKHLNI------KNNPYLLEAIKTGKIKPENIAFLKPEEIYPEKFE 96
Query: 310 RQIENIK-EKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVN 368
+ K EKA+ + Q ATTD FKC RC +RK Q Q R+ DEPMTT+VTCV
Sbjct: 97 AILNKRKLEKAIKDNQ------ATTDAFKCPRCKKRKAKIDQKQIRAGDEPMTTFVTCVE 150
Query: 369 CSKRWKF 375
C KF
Sbjct: 151 CGNVQKF 157
>gi|313844000|ref|YP_004061663.1| hypothetical protein OlV1_030c [Ostreococcus lucimarinus virus
OlV1]
gi|312599385|gb|ADQ91407.1| hypothetical protein OlV1_030c [Ostreococcus lucimarinus virus
OlV1]
gi|357541718|gb|AET84480.1| hypothetical protein OLOG_00014 [Ostreococcus lucimarinus virus
OlV4]
Length = 178
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 256 GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI 315
+ T K K+ I N+++ + L+ ++ +V ++ M PE++ D +
Sbjct: 60 HKYTNIYKHKFLQIQHNLKN--SSVLKDWIITKKVKTREVIDMRPEDLWPD--GPYATKM 115
Query: 316 KEKALFECQRGGEATATTDQ---FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKR 372
+E+ E ++ A +Q F C+RC +K TYYQ+QTRSADEPMTT+V+C+NC +
Sbjct: 116 QERMYKEIRKAYLAQEVKNQEGFFTCARCKSKKTTYYQLQTRSADEPMTTFVSCLNCDRN 175
Query: 373 WK 374
WK
Sbjct: 176 WK 177
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 19/170 (11%)
Query: 138 KVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPK 197
K EKT S + T VEK +G + +K +KI EK P V P+ + P
Sbjct: 854 KGEKTHKESTANTCTVEKASKSG---THEKQEMKKKKI---EKGGPHVHPPA--AASKPS 905
Query: 198 LTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGR 257
Q+ R +R L + L + ++++ ++ +E A +VA +E +F
Sbjct: 906 ADQI-------RQSVRHSLKDILMRRLTDSNLKVPEEKAA----KVATKIEKELFSFFRD 954
Query: 258 STGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
+ K KYRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 955 TDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1004
>gi|407860299|gb|EKG07322.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 19/169 (11%)
Query: 211 KIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM 270
K L+ +AL + ++ +EE I+ + +R+ ++ RS A+ +R ++
Sbjct: 87 KWSALIGSALMQGRAKEEEEKINALA----LRIVTAIPG------DRSLAADG--FRVLL 134
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE-RQRQIENIKEKA----LFECQR 325
N+RD KN LR+ ++ G + E LV MS ++ + E R+ Q E +++ L E +R
Sbjct: 135 VNLRDAKNTKLREDIIEGRLPVEVLVHMSERDLLNPEARKNQEEEFLKRSRDTDLSEIRR 194
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+T F+C C R C++ Q QTRSADEPMT + C C +W+
Sbjct: 195 AMATKSTL--FQCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDHKWR 241
>gi|71657176|ref|XP_817107.1| transcription elongation factor [Trypanosoma cruzi strain CL
Brener]
gi|70882278|gb|EAN95256.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 19/169 (11%)
Query: 211 KIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM 270
K L+ AL + ++ +EE I+ + +R+ ++ RS A+ +R ++
Sbjct: 87 KWSALIGGALMQGRAKEEEERINALA----LRIVTAIPG------DRSLAADG--FRVLL 134
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE-RQRQIENI----KEKALFECQR 325
N+RD KN LR+ ++ G + E LV MS ++ + E R+ Q E K+ L E +R
Sbjct: 135 VNLRDSKNTKLREDIIEGRLPVEVLVHMSERDLLNPEARKNQEEEFLKRSKDTDLSEIRR 194
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+T F C C R C++ Q QTRSADEPMT + C C +W+
Sbjct: 195 AMATKSTL--FPCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDHKWR 241
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P+ AT K + D R +R L + L K ++++ +I +E A
Sbjct: 177 EKGGPNVHPPA----ATSKPSA-----DQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA- 226
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 227 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 283
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 284 SPEELASKE 292
>gi|398021913|ref|XP_003864119.1| transcription elongation factor-like protein [Leishmania donovani]
gi|322502353|emb|CBZ37437.1| transcription elongation factor-like protein [Leishmania donovani]
Length = 473
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 281 LRKRVLLGEVTPERLVTMSPEEMAS-DERQRQIENIKEKALFECQRGGEATATTDQFKCS 339
+R +L GE TP++ + E + E+ RQ + I+EK T FKC
Sbjct: 377 IRDHLLSGEWTPKKYLDQPNEVFTTKSEKARQEQRIQEKMKAIEAADNAMLNITSLFKCG 436
Query: 340 RCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
RC +R CT+Y+ QTRSADEP T Y+TC++C W
Sbjct: 437 RCSKRHCTFYEQQTRSADEPTTKYITCLDCKNTW 470
>gi|71414282|ref|XP_809248.1| transcription elongation factor [Trypanosoma cruzi strain CL
Brener]
gi|70873602|gb|EAN87397.1| transcription elongation factor, putative [Trypanosoma cruzi]
Length = 243
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 19/169 (11%)
Query: 211 KIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM 270
K L+ +AL + ++ +EE I+ + +R+ ++ RS A+ +R ++
Sbjct: 87 KWSALIGSALMQGRAKEEEEQINALA----LRIVTAIPG------DRSLAADG--FRVLL 134
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE-RQRQIENIKEKA----LFECQR 325
N+RD KN LR+ ++ G + E LV MS ++ + E R+ Q E +++ L E +R
Sbjct: 135 VNLRDAKNTKLREDIIEGRLPVEVLVHMSERDLLNPEARKNQEEEFLKRSRDTDLSEIRR 194
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+T F C C R C++ Q QTRSADEPMT + C C +W+
Sbjct: 195 AMATKSTL--FPCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDHKWR 241
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 178 EEKQAPSVRKPSQGTIAT-PKLTQLIKCN-DSSRDKIRELLANALSKVTSEADEEIIDEV 235
EKQ P +K +GT P K + D R +R L + L K ++++ ++ +E
Sbjct: 884 HEKQEPKKKKAEKGTPGVHPAAAPTSKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEK 943
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
A +VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L
Sbjct: 944 AA----KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHL 999
Query: 296 VTMSPEEMASDE 307
+ MSPEE+AS E
Sbjct: 1000 IKMSPEELASKE 1011
>gi|290973573|ref|XP_002669522.1| hypothetical protein NAEGRDRAFT_82114 [Naegleria gruberi]
gi|284083071|gb|EFC36778.1| hypothetical protein NAEGRDRAFT_82114 [Naegleria gruberi]
Length = 176
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
A + FKC++C +CTYYQ+QTRS+DEPMTT++TC+NC RWK
Sbjct: 132 AVSSTFKCTKCQSTQCTYYQLQTRSSDEPMTTFITCLNCGNRWK 175
>gi|281206908|gb|EFA81092.1| hypothetical protein PPL_05928 [Polysphondylium pallidum PN500]
Length = 79
Score = 74.3 bits (181), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 38/44 (86%)
Query: 332 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
++D F C +CG+RKCTY+Q+QTRSAD+P+TT+VTCV C+ RW +
Sbjct: 15 SSDLFTCPKCGKRKCTYFQLQTRSADDPLTTFVTCVTCNNRWIY 58
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 12/129 (9%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P+ T + P Q+ R +R L + L + +E++ ++ +E A
Sbjct: 908 EKGIPNVHVPTTST-SKPSADQI-------RQSVRHSLKDILMRRLTESNLKVPEEKAA- 958
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 959 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 1015
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 1016 SPEELASKE 1024
>gi|407425373|gb|EKF39382.1| transcription elongation factor, putative [Trypanosoma cruzi
marinkellei]
Length = 287
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 37/281 (13%)
Query: 100 GDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETN 159
G SVTT + + + V++ V +T V T VS + + +K
Sbjct: 36 GRLGSVTTNMSEEKRDEAVGVKRPRPVSFTPTTTPLEDSVHVTPRVSPRTPLPLARKSVM 95
Query: 160 GDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSR-DKIRELLAN 218
G V G + + I+ ++Q P G + SSR K L+++
Sbjct: 96 GSPVGSFGSSTQSITPIKPKEQ------PMIGGV-----------QGSSRVAKWSALISD 138
Query: 219 ALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKN 278
AL ++ +E D +NA +R+ ++ RS A+ +R ++ N+RD KN
Sbjct: 139 ALMHGRAKEEE---DRINALA-LRIVTAIPG------DRSVAADG--FRVLLVNLRDAKN 186
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDE-RQRQIENI----KEKALFECQRGGEATATT 333
LR+ ++ G + E LV MS ++ + E R+ Q E K+ L E +R +T
Sbjct: 187 TKLREDIIEGRLPVELLVHMSERDLLNPEARKSQEEEFLKRSKDTDLTEIRRAMATKSTL 246
Query: 334 DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
F C C R C++ Q QTRSADEPMT + C C +W+
Sbjct: 247 --FSCPSCKARDCSWTQKQTRSADEPMTVFCICNVCDYKWR 285
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P+ + P Q+ R +R L + L K ++++ +I +E A
Sbjct: 886 EKGGPNVHPPA--ATSKPSADQI-------RQSVRHSLKDILMKRLTDSNLKIPEEKAA- 935
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 936 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 992
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 993 SPEELASKE 1001
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P+ + P Q+ R +R L + L K ++++ +I +E A
Sbjct: 886 EKGGPNVHPPA--ATSKPSADQI-------RQSVRHSLKDILMKRLTDSNLKIPEEKAA- 935
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 936 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 992
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 993 SPEELASKE 1001
>gi|67906720|gb|AAY82793.1| hypothetical protein At2g13640 [Arabidopsis thaliana]
Length = 379
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E+V+LF+AAKKAAD A GV SG PEVSRC+DAL L +T ++ +L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGL 322
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEE 89
TKH KI VAS LL +W++ + E+
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|15225452|ref|NP_178987.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|4558668|gb|AAD22686.1| hypothetical protein [Arabidopsis thaliana]
gi|330251155|gb|AEC06249.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 384
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E+V+LF+AAKKAAD A GV SG PEVSRC+DAL L +T ++ +L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGL 322
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEE 89
TKH KI VAS LL +W++ + E+
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|29423670|gb|AAO73429.1| hypothetical protein [Arabidopsis thaliana]
Length = 384
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E+V+LF+AAKKAAD A GV SG PEVSRC+DAL L +T ++ +L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGL 322
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEE 89
TKH KI VAS LL +W++ + E+
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|159481668|ref|XP_001698900.1| hypothetical protein CHLREDRAFT_159323 [Chlamydomonas reinhardtii]
gi|158273392|gb|EDO99182.1| predicted protein [Chlamydomonas reinhardtii]
Length = 229
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 21/158 (13%)
Query: 233 DEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVT 291
DE + D +A +E+ +F G G E K R ++ +++ +N DLR +V+ G V
Sbjct: 73 DEGDTPDVTGLAEDIEAALFHHHGSKPGPEYKAAARLLVASLK--RNADLRGQVVSGAVD 130
Query: 292 PERLVTMSPEEMASDERQRQIENIKEKALFECQR----GGEATAT-TDQFKCSRCGQRKC 346
P LV M ++A+ ++Q++ ++K+KAL QR G A+ T T ++ C +CG C
Sbjct: 131 PAALVAMDSRQLATSQQQQEFAHLKDKAL---QRVTVVGSGASGTLTTEYACKKCGGNNC 187
Query: 347 TYYQ--------MQTRSADEPMTT--YVTCVNCSKRWK 374
Y + +T + E TT VTC+ C RW+
Sbjct: 188 NYIESGRRDIGKSETWGSKEGATTNRVVTCLGCGHRWE 225
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
DS RDK E+L+ AL +AD++ D CD ++A +E ++++L + + +
Sbjct: 26 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNR 78
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR 325
RS + N++D +NP LR+ VL G ++ + M+ EEMASDE + + ++A+ E Q
Sbjct: 79 VRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 138
Query: 326 GGEATATTDQFKCSRC 341
TTD F+CS+C
Sbjct: 139 AKTGGTTTDLFQCSKC 154
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P+ + P Q+ R +R L + L K ++++ +I +E A
Sbjct: 45 EKGGPNVHPPA--ATSKPSADQI-------RQSVRHSLKDILMKRLTDSNLKIPEEKAA- 94
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 95 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 151
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 152 SPEELASKE 160
>gi|403349966|gb|EJY74429.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS++FN+ D KN +LR ++L E++ ++LV +++AS+ +++ E + L +
Sbjct: 423 KARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASEWMKQKREESLLRTLSMKR 482
Query: 325 RGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ T Q F+C CG +K Y Q+Q ADEPMT +V C +C RWK
Sbjct: 483 TDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCYDCENRWK 537
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 127 KVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVR 186
K+ K ST T EK E +++KK KVEK + A S
Sbjct: 875 KIPKESTTVTCTGEKASKPGTHEKQEMKKK--------------KVEKGVLNVHPAASAS 920
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS 246
KPS I R +R L + L K ++++ +I +E A +VA
Sbjct: 921 KPSADQI---------------RQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATK 961
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
+E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS
Sbjct: 962 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1021
Query: 307 E 307
E
Sbjct: 1022 E 1022
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 127 KVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVR 186
K+ K ST T EK E +++KK KVEK + A S
Sbjct: 890 KIPKESTTVTCTGEKASKPGTHEKQEMKKK--------------KVEKGVLNVHPAASAS 935
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS 246
KPS I R +R L + L K ++++ +I +E A +VA
Sbjct: 936 KPSADQI---------------RQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATK 976
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
+E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS
Sbjct: 977 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1036
Query: 307 E 307
E
Sbjct: 1037 E 1037
>gi|403368207|gb|EJY83934.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K RS++FN+ D KN +LR ++L E++ ++LV +++AS+ +++ E + L +
Sbjct: 423 KARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASEWMKQKREESLLRTLSMKR 482
Query: 325 RGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ T Q F+C CG +K Y Q+Q ADEPMT +V C +C RWK
Sbjct: 483 TDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCYDCENRWK 537
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 171 KVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE 230
KVEK + A S KPS I R +R L + L K ++++ +
Sbjct: 817 KVEKGVLNVHPAASASKPSADQI---------------RQSVRHSLKDILMKRLTDSNLK 861
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
I +E A +VA +E +F + K KYRS+MFN++D KN L K+VL GEV
Sbjct: 862 IPEEKAA----KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEV 917
Query: 291 TPERLVTMSPEEMASDE 307
TP+ L+ MSPEE+AS E
Sbjct: 918 TPDHLIRMSPEELASKE 934
>gi|301791824|ref|XP_002930880.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Ailuropoda melanoleuca]
Length = 285
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 38/225 (16%)
Query: 160 GDSVMDR-GEAVKVEKIIEEEKQAPSVRKPSQ-GTIATPKLTQLIKC---NDSSRDKIRE 214
G+ V +R G+ +E+ + +A + + PS T P + L C +S DK E
Sbjct: 89 GERVEERKGKRPLIERSNSSKSKAETPKTPSSPSTPFAPSIFLLAPCYLTGNSVWDKCME 148
Query: 215 LLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMF--- 271
+L+ A S+A++ + D ++A +E ++E+L + +KY +++
Sbjct: 149 MLSAA-----SKANDGYXGLXSHXD--KMASVIEDNIYEELK----SMDMKYWNLVHSXI 197
Query: 272 -NIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEAT 330
N++D +NP LR+ VL G ++ + M+ EEMA DE RQI + GG
Sbjct: 198 RNLKDXRNPSLRRNVLSGTISAGLIAKMTAEEMACDE-LRQIT----------KAGG--- 243
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
TTD F+ S+C ++ C+ Q+Q+ SAD+PMT C C WKF
Sbjct: 244 TTTDFFQYSKC-KKNCSNNQVQSCSADKPMT---XCNECGNHWKF 284
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 127 KVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVR 186
K+ K ST T EK E +++KK KVEK + A S
Sbjct: 890 KIPKESTTVTCTGEKASKPGTHEKQEMKKK--------------KVEKGVLNVHPAASAS 935
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS 246
KPS I R +R L + L K ++++ ++ +E A +VA
Sbjct: 936 KPSADQI---------------RQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATK 976
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
+E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS
Sbjct: 977 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1036
Query: 307 E 307
E
Sbjct: 1037 E 1037
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
+K PSV P+ + P Q+ R +R L L K ++++ ++ +E A
Sbjct: 909 DKGVPSVHPPA-APASKPSTDQI-------RQSVRHSLKEILMKRLTDSNLKVPEEKAA- 959
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 960 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 1016
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 1017 SPEELASKE 1025
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 127 KVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVR 186
K+ K ST T EK E +++KK KVEK + A S
Sbjct: 875 KIPKESTTVTCTGEKASKPGTHEKQEMKKK--------------KVEKGVLNVHPAASAS 920
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS 246
KPS I R +R L + L K ++++ ++ +E A +VA
Sbjct: 921 KPSADQI---------------RQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATK 961
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
+E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS
Sbjct: 962 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1021
Query: 307 E 307
E
Sbjct: 1022 E 1022
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
+K PSV P+ + P Q+ R +R L L K ++++ ++ +E A
Sbjct: 821 DKGVPSVHPPA-APASKPSTDQI-------RQSVRHSLKEILMKRLTDSNLKVPEEKAA- 871
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 872 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 928
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 929 SPEELASKE 937
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 127 KVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVR 186
K+ K ST T EK E +++KK KVEK + A S
Sbjct: 880 KIPKESTTVTCTGEKASKPGTHEKQEMKKK--------------KVEKGVLNVHPAASAS 925
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS 246
KPS I R +R L + L K ++++ ++ +E A +VA
Sbjct: 926 KPSADQI---------------RQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATK 966
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
+E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS
Sbjct: 967 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1026
Query: 307 E 307
E
Sbjct: 1027 E 1027
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 109 VVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGE 168
++K +SG+ + +++K A K+ ++ RS + EK + +V+ GE
Sbjct: 833 ILKRESGEGKNSSDSRDSEMKKWQLAPLRKMGQSALPRRSSEEKSEKIPKDSTTVICTGE 892
Query: 169 AVKVEKIIEEEKQAPSVRKPSQG--TIATPKLTQLIKCNDSSRDKIRELLANALSKVTSE 226
K K+ EKQ +K +G + P D R +R L + L K ++
Sbjct: 893 --KASKLGAHEKQEVKKKKAEKGVANVHPPAAAAAKPSADQIRQSVRHSLKDILMKRLTD 950
Query: 227 ADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVL 286
++ ++ +E A +VA +E +F + K KYRS+MFN++D KN L K+VL
Sbjct: 951 SNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVL 1006
Query: 287 LGEVTPERLVTMSPEEMASDE 307
GEVTP+ L+ MSPEE+AS E
Sbjct: 1007 KGEVTPDHLIRMSPEELASKE 1027
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 928 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 983
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 984 YRSLMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPEELASKE 1025
>gi|334346763|ref|XP_003341849.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Monodelphis domestica]
Length = 366
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 147/355 (41%), Gaps = 54/355 (15%)
Query: 36 DALKRLKSFPVTYDVLVSTQVGKRLRPLTKH-PREKIQIVASNLLDIWKKIVIEETTRNK 94
D L L++ + + L T V + + + KH P + A LL WKK+
Sbjct: 41 DHLTELETIHMNVEHLQETDVVRAVYRVLKHCPIVIFKKKAKYLLCNWKKLY-------- 92
Query: 95 KNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETV--Q 152
KN + + G+ K I+ V ++ +T+ + + SVS ++ V
Sbjct: 93 KNHPVNNPNFFLNGIKK----NIEHVNLVQEENPPYLTQEQTLDIASSNSVSPAQDVAKD 148
Query: 153 VEK--KETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRD 210
VEK E N D+V + E E + + ++ + D R
Sbjct: 149 VEKIMPENNADAVEEHSE----EHFMNNDPKSIGNKSAWH--------------QDPMRS 190
Query: 211 KIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM 270
K ELL AL VT D++ D + ++A +E +F ++ K RS +
Sbjct: 191 KCVELLYGAL--VTCATDQQKTDHLQ-----KLAREIEEYIFVLYSKNLKKYKNCIRSKV 243
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE-CQRGGEA 329
N++++KNP L++ + G ++P+ M+ EMA++E ++ + E + E C
Sbjct: 244 SNLKNQKNPHLQQNLFSGTLSPKEFAEMTVMEMANEELKQLRASYTESCIQEHCLPQMVD 303
Query: 330 TATTDQFKCSRCGQRKC---------TYYQMQTRSA--DEPMTTYVTCVNCSKRW 373
TD+ KC RC + C + R+A DE M TYV C C ++W
Sbjct: 304 GTQTDKIKCRRCEKFNCKVTVIARGALFLPSWVRNANPDEQMMTYVICNECGEQW 358
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 836 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 891
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 933
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 829 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 884
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 885 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 926
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 19/137 (13%)
Query: 171 KVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEE 230
KVEK + A S KPS I R +R L + L K ++++ +
Sbjct: 817 KVEKGVLNVHPAASASKPSADQI---------------RQSVRHSLKDILMKRLTDSNLK 861
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+ +E A +VA +E +F + K KYRS+MFN++D KN L K+VL GEV
Sbjct: 862 VPEEKAA----KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEV 917
Query: 291 TPERLVTMSPEEMASDE 307
TP+ L+ MSPEE+AS E
Sbjct: 918 TPDHLIRMSPEELASKE 934
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 959 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1014
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 1015 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1056
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 918 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 973
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 974 YRSLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKE 1015
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 873 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 928
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 929 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 970
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 928 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 983
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 984 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1025
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1014
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 194 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 249
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 250 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 291
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 980
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1022
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1014
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1014
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 991 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1046
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 1047 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1088
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 13/142 (9%)
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVT----SEADEEIID 233
EKQ +K +G+I+ L + + S D+IR+ + +L ++ +++ +I +
Sbjct: 926 HEKQEIKKKKNEKGSISATHLP-AVPASKPSADQIRQSVKQSLKEILMKRLTDSSLKIPE 984
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
E A +VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+
Sbjct: 985 ERAA----KVATRIERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 1040
Query: 294 RLVTMSPEEMASDE----RQRQ 311
L+ MSPEE+AS E RQR+
Sbjct: 1041 HLIKMSPEELASKELAAWRQRE 1062
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 194 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 249
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 250 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 291
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 927 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 982
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 983 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1024
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 13/142 (9%)
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVT----SEADEEIID 233
EKQ +K +G+I+ L + + S D+IR+ + +L ++ +++ +I +
Sbjct: 821 HEKQEIKKKKNEKGSISATHLP-AVPASKPSADQIRQSVKQSLKEILMKRLTDSSLKIPE 879
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
E A +VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+
Sbjct: 880 ERAA----KVATRIERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 935
Query: 294 RLVTMSPEEMASDE----RQRQ 311
L+ MSPEE+AS E RQR+
Sbjct: 936 HLIKMSPEELASKELAAWRQRE 957
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 127 KVEKVSTAETVKVEKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVR 186
K+ K ST T EK E +++KK KVEK + A S
Sbjct: 641 KIPKESTTVTCTGEKASKPGTHEKQEMKKK--------------KVEKGMLNVHPAASAS 686
Query: 187 KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS 246
KPS I R +R L + L K ++++ ++ +E A +VA
Sbjct: 687 KPSADQI---------------RQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATK 727
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
+E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS
Sbjct: 728 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 787
Query: 307 E 307
E
Sbjct: 788 E 788
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 80/142 (56%), Gaps = 13/142 (9%)
Query: 178 EEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVT----SEADEEIID 233
EKQ +K +G+I+ L + + S D+IR+ + +L ++ +++ +I +
Sbjct: 909 HEKQEIKKKKNEKGSISATHLP-AVPASKPSADQIRQSVKQSLKEILMKRLTDSSLKIPE 967
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPE 293
E A +VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+
Sbjct: 968 ERAA----KVATRIERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 1023
Query: 294 RLVTMSPEEMASDE----RQRQ 311
L+ MSPEE+AS E RQR+
Sbjct: 1024 HLIKMSPEELASKELAAWRQRE 1045
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 1051 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 1106
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 1107 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1148
>gi|448927837|gb|AGE51409.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CviKI]
Length = 180
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL +++ GE + + V P E+
Sbjct: 50 KKLGHELKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLEKMKTGETSIKNFVNAKPWEIC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQTRSADE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQTRSADE 163
Query: 359 PMTTYVTCVNCSKRWK 374
PMT + C +C RWK
Sbjct: 164 PMTVFAKCHSCGSRWK 179
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 11/120 (9%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
P T + P Q+ R +R L + L K ++++ ++ +E A +VA +
Sbjct: 1068 PPAATTSKPSANQI-------RQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKI 1116
Query: 248 ESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M+PEE+AS E
Sbjct: 1117 EKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMNPEELASKE 1176
>gi|1085870|pir||S47663 transcription elongation factor TFIIS homolog - Chlorella virus
CV-K2
gi|565274|dbj|BAA04187.1| transcription elongation factor SII [Chlorella virus]
gi|448928857|gb|AGE52426.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CvsA1]
gi|448931619|gb|AGE55180.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus MA-1E]
Length = 180
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 20/136 (14%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE++ + V P E+
Sbjct: 50 KKLGHELKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLDKMKTGEMSIKNFVNAKPWEVC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQTRSADE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQTRSADE 163
Query: 359 PMTTYVTCVNCSKRWK 374
PMT + C +C RWK
Sbjct: 164 PMTVFAKCHSCGSRWK 179
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P + + P Q+ R +R L + L K ++++ ++ +E A
Sbjct: 824 EKGVPNV--PPPASTSKPSADQI-------RQSVRHSLKDILMKRLTDSNLKVPEEKAA- 873
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 874 ---KVATKIEKELFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 930
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 931 SPEELASKE 939
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK P+V P + + P Q+ R +R L + L K ++++ ++ +E A
Sbjct: 912 EKGVPNV--PPPASTSKPSADQI-------RQSVRHSLKDILMKRLTDSNLKVPEEKAA- 961
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 962 ---KVATKIEKELFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRM 1018
Query: 299 SPEEMASDE 307
SPEE+AS E
Sbjct: 1019 SPEELASKE 1027
>gi|448930913|gb|AGE54476.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus KS1B]
Length = 180
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 20/136 (14%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE + + V P E+
Sbjct: 50 KKLGHELKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLDKMKTGETSIKNFVNAKPWEVC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQTRSADE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQTRSADE 163
Query: 359 PMTTYVTCVNCSKRWK 374
PMT + C +C RWK
Sbjct: 164 PMTVFAKCHSCGSRWK 179
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E +F + K K
Sbjct: 10 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 65
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 66 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 107
>gi|410926740|ref|XP_003976831.1| PREDICTED: transcription elongation factor A protein 2-like,
partial [Takifugu rubripes]
Length = 167
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
+L S +EMAS E ++ E + ++++ E Q TD F C+ C + C+Y Q+Q
Sbjct: 87 KLFPASTQEMASAELKQIREALTKESIREHQLSKVGGTETDMFICNNCHGKSCSYTQVQI 146
Query: 354 RSADEPMTTYVTCVNCSKRWK 374
RSADEPMTT+V C +C RWK
Sbjct: 147 RSADEPMTTFVLCNSCGNRWK 167
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R ++ L + L K ++++ +I +E A +VA +E +F + K K
Sbjct: 924 DQIRQSVKHSLKDILMKRLTDSNLKIPEERAA----KVATKIEKELFSFFRDTDAKYKNK 979
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1021
>gi|9631693|ref|NP_048472.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|1131468|gb|AAC96492.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 180
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 20/136 (14%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE + + V P E+
Sbjct: 50 KKLGHDLKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLDKMKTGETSIKNFVNSKPWEVC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQTRSADE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQTRSADE 163
Query: 359 PMTTYVTCVNCSKRWK 374
PMT + C +C RWK
Sbjct: 164 PMTVFAKCHSCGSRWK 179
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 179 EKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNAC 238
EK PSV P+ + P Q+ R +R L + L K +E++ ++ +E A
Sbjct: 888 EKGVPSVH-PAAPRASKPSADQI-------RQSVRHSLKDILMKRLTESNLKVPEEKAA- 938
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+VA +E +F + K KYRS+MFN++D KN L K+VL GEVTP+ L+ M
Sbjct: 939 ---KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKM 995
Query: 299 SPEEMASDE 307
S EE+AS E
Sbjct: 996 SSEELASKE 1004
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E ++ + K K
Sbjct: 836 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 891
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 933
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E ++ + K K
Sbjct: 836 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 891
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 933
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E ++ + K K
Sbjct: 924 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 979
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1021
>gi|71755313|ref|XP_828571.1| transcription elongation factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70833957|gb|EAN79459.1| transcription elongation factor, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 213
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 19/174 (10%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ K + LL AL + E DE + ++ +R+ ++ GRS A+
Sbjct: 52 DTRLTKWKTLLCKALMQGRKEEDEGRVADM----ALRIVKAIPG------GRSESADT-- 99
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS-DERQRQ----IENIKEKAL 320
+R ++ ++ D KN +LR+ ++ + + E LV M ++ + +ER+RQ + ++ L
Sbjct: 100 FRMLLVHLGDAKNRELRESIIEEKFSVEVLVRMKERDLLNPEERERQEAAFLARSRDTDL 159
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E ++ T+T F C C + CT+ Q QTRSADEPMT + C C +W+
Sbjct: 160 TEIRKATSTTSTL--FPCPSCKAKNCTWTQKQTRSADEPMTIFCICNICEHKWR 211
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R+ L L K +++ +I +E A +VA +E +F + K K
Sbjct: 925 DQIRQSVRQSLKEILEKRLTDSTLKIPEERAA----KVATKIEKELFSFFRDTDSKYKNK 980
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS++FN++D KN L KRVL GEVTP+ L+ MSPEE+AS E
Sbjct: 981 YRSLIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEELASKE 1022
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +R L + L K ++++ ++ +E A +VA +E ++ + K K
Sbjct: 924 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSFFRDTDAKYKNK 979
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1021
>gi|261334448|emb|CBH17442.1| transcription elongation factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 213
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 19/174 (10%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ K + LL AL + E DE + ++ +R+ ++ GRS A+
Sbjct: 52 DTRLTKWKTLLCKALMQGRKEEDEGRVADM----ALRIVKAIPG------GRSESADT-- 99
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS-DERQRQ----IENIKEKAL 320
+R ++ ++ D KN +LR+ ++ + + E LV M ++ + +ER+RQ + ++ L
Sbjct: 100 FRMLLVHLGDAKNRELRESIIEEKFSVEVLVRMKERDLLNPEERERQEAAFLARSRDTDL 159
Query: 321 FECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E ++ T+T F C C + CT+ Q QTRSADEPMT + C C +W+
Sbjct: 160 TEIRKATSTTSTL--FPCPSCKAKNCTWTQKQTRSADEPMTIFCICNICEHKWR 211
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K L+ ALS + D ++++ A +A ++E + GR+ K RS
Sbjct: 216 RSKCVHLILQALS-TNQQTDPGHMNKLKA-----LAENIELHVHALHGRNQHKYKFHIRS 269
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N+++ NP LR+ ++ G++TP+ MS EEMA ++ +R E A+ E Q
Sbjct: 270 KVANLKNPNNPHLRQGLISGQLTPDAFAQMSVEEMAGEKLRRLRETYTSLAISEHQLPET 329
Query: 329 ATAT-TDQFKCSRCGQRKCTYYQM-----------QTRSADEPMTTYVTCVNCSKRW 373
T T++ +C +C C Q+ Q+ SAD T++TC NC ++W
Sbjct: 330 VKGTPTNKVRCRQCDSMDCRVTQISRGTLFLPSWVQSGSADNDSMTFMTCANCGEQW 386
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 248 ESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
++ ++++L + + + RS + N++D +NP LR+ VL G ++P + M+ EEMASDE
Sbjct: 8 QTHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDE 67
Query: 308 RQRQIEN-IKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMT 361
R++ N + ++A+ E Q TTD +CS+C ++ CTY Q+ EP T
Sbjct: 68 -LRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVGKVLLTEPPT 121
>gi|15240482|ref|NP_198083.1| Transcription factor IIS family protein [Arabidopsis thaliana]
gi|332006288|gb|AED93671.1| Transcription factor IIS family protein [Arabidopsis thaliana]
Length = 370
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E+V+LF+AAKKAAD A GV SG PE SRC++AL L +T + +L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEASRCINALSLLMKINITPKPKEPRSMMDKLEGL 322
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEE 89
TKH KI VAS LL +W++ + E+
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +++ L L K +++ +I +E A +VA +E +F + K K
Sbjct: 933 DQIRHSVKQSLKEILMKRLTDSSLKIPEERAA----KVATRIERELFSFFRDTDSKYKNK 988
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQ 311
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E RQR+
Sbjct: 989 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRE 1038
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R +++ L L K +++ +I +E A +VA +E +F + K K
Sbjct: 933 DQIRHSVKQSLKEILMKRLTDSSLKIPEERAA----KVATRIERELFSFFRDTDSKYKNK 988
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQ 311
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E RQR+
Sbjct: 989 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRE 1038
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R ++ L + L K ++++ +I +E + +VA +E +F + K K
Sbjct: 916 DQIRQSVKHSLKDILMKRLTDSNLKIPEERAS----KVATKIEKELFSFFRDTDAKYKNK 971
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 972 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1013
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 11/111 (9%)
Query: 209 RDKIRELLANALSKVTSEADEEII--DEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLK 265
R +R++L +AL EA + + DEV R+A+ +E +F K+ R TG K K
Sbjct: 1018 RLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELF-KVFRDTGTRYKSK 1071
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE--RQRQIEN 314
YRS++FNI+D +N L +++L G++ P+RLV M+PEE+AS E R R+ EN
Sbjct: 1072 YRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQEN 1122
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D R ++ L + L K ++++ +I +E + +VA+ +E +F + K K
Sbjct: 82 DQIRQSVKHSLKDILMKRLTDSNLKIPEERAS----KVAMKIEKELFSFFRDTDAKYKNK 137
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
YRS+MFN++D KN L K+VL GEVTP+ L+ MSPEE+AS E
Sbjct: 138 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 179
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 11/111 (9%)
Query: 209 RDKIRELLANALSKVTSEADEEII--DEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLK 265
R +R++L +AL EA + + DEV R+A+ +E +F K+ R TG K K
Sbjct: 986 RLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELF-KVFRDTGTRYKSK 1039
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE--RQRQIEN 314
YRS++FNI+D +N L +++L G++ P+RLV M+PEE+AS E R R+ EN
Sbjct: 1040 YRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQEN 1090
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 11/111 (9%)
Query: 209 RDKIRELLANALSKVTSEADEEII--DEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLK 265
R +R++L +AL EA + + DEV R+A+ +E +F K+ R TG K K
Sbjct: 974 RLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELF-KVFRDTGTRYKSK 1027
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE--RQRQIEN 314
YRS++FNI+D +N L +++L G++ P+RLV M+PEE+AS E R R+ EN
Sbjct: 1028 YRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQEN 1078
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 11/111 (9%)
Query: 209 RDKIRELLANALSKVTSEADEEII--DEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLK 265
R +R++L +AL EA + + DEV R+A+ +E +F K+ R TG K K
Sbjct: 986 RLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELF-KVFRDTGTRYKSK 1039
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE--RQRQIEN 314
YRS++FNI+D +N L +++L G++ P+RLV M+PEE+AS E R R+ EN
Sbjct: 1040 YRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQEN 1090
>gi|167386526|ref|XP_001737794.1| transcription elongation factor S-II [Entamoeba dispar SAW760]
gi|165899246|gb|EDR25885.1| transcription elongation factor S-II, putative [Entamoeba dispar
SAW760]
Length = 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 262 EKLKY--RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIEN--IKE 317
EK + R I+ +R KN L + ++TP L+ MSP++MA DE ++I+ IK+
Sbjct: 55 EKFNFHLRQILAGLR--KNKKLVDSLCSKKITPNELIEMSPDDMA-DETVKEIKERIIKD 111
Query: 318 KALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
+ + +++FKCS+CG RK QTRSADEPMT ++TC +C WK
Sbjct: 112 EEDKKKPIDISKIPDSNEFKCSKCGSRKIQETLAQTRSADEPMTRFLTCASCGFFWKM 169
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R+K RE+L AL ++ D I D R++ +E +F +G + K +
Sbjct: 10 DAVRNKCREMLTAALQ---TDHDHVAI----GADCERLSAQIEECIFRDVGNTDMKYKNR 62
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
RS + N++D KNPDLR+ VL G +TP+++ M+ EEMASDE
Sbjct: 63 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDE 104
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 10/104 (9%)
Query: 212 IRELLANALS-----KVTSEADEEIIDE---VNACDPIRVAVSVESVMFEKLGRSTGAEK 263
I ++A+ LS ++ S DEE ID+ + D +AV VE +F+ G K
Sbjct: 310 IDPVVADTLSESESKRMKSANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYK 367
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
K RS++FN++D+ NP+LR+RVL G++TP+RL +M+ EE+AS E
Sbjct: 368 EKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKE 411
>gi|448926845|gb|AGE50420.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVA-1]
gi|448928528|gb|AGE52098.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVR-1]
Length = 180
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL-FECQRGGEATATTD-QF 336
PDL ++ G+ + V P E+ SD+ E +AL F + D
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARRALRFSDASSMDPADMADGML 141
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
C +C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 142 SCGKCKSRKTSYYEMQTRSADEPMTVFAKCHTCGSRWK 179
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 72/118 (61%), Gaps = 11/118 (9%)
Query: 209 RDKIRELLANALSKVTSEADEEII--DEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
R +R++L ++LS +AD+ + DEV R+AV +E +F+ + K KY
Sbjct: 813 RINVRKVLRDSLSNRCKDADDISLSGDEVK-----RMAVRIEEELFKYFKDTGTKYKSKY 867
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQIENIKEKAL 320
RS++FNI+D +N L +++L G++ P++LV M+PEE+AS E R+R+ +++ L
Sbjct: 868 RSLVFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELASKELAKWRERENQHVAPPPL 925
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 10/104 (9%)
Query: 212 IRELLANALS-----KVTSEADEEIIDE---VNACDPIRVAVSVESVMFEKLGRSTGAEK 263
I ++A+ LS ++ S DEE ID+ + D +AV VE +F+ G K
Sbjct: 310 IDPVVADTLSESESKRMKSANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYK 367
Query: 264 LKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
K RS++FN++D+ NP+LR+RVL G++TP+RL +M+ EE+AS E
Sbjct: 368 EKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKE 411
>gi|298713146|emb|CBJ26902.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 437
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 234 EVNACDPIRVAVSVESVMFEKLGRS-TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTP 292
E +A P A VE +F G S T A K K R + FN+R KN LR+R+L G + P
Sbjct: 293 ETSATLPASKAKEVEDAIFALCGGSVTKAYKAKAREMSFNLRVGKNDPLRERLLSGSLLP 352
Query: 293 ERLVTMSPEEMASDERQRQIENIKEKALFEC--QRGGEATATTDQFKCSRCGQRKCTYYQ 350
LV MS ++A +R+ E K + E R TD+F C CG K Y
Sbjct: 353 SDLVRMSSNDLAPLSVRRERERFARKRIREVTSSRDSPFHTVTDRFACVECGHEKTQYRT 412
Query: 351 MQTRSADEPMTTYVTCVNCSKRWKF 375
+ ++ + + V C+ C W+
Sbjct: 413 WRRKAVVDRVRVIVQCLQCRHSWEL 437
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 42/226 (18%)
Query: 131 VSTAETVKVEKTGSVSRSETVQVEKK---ETNGDSVMDRGEAVKVEKI------------ 175
V AET EK G V +++ +K+ E V + G K +K+
Sbjct: 203 VPEAETPAPEKNGHVPETQSTSAQKRKFDEHQEVQVPEPGPKTKQQKMSPPAPATPVPAA 262
Query: 176 ------IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKV----TS 225
++EE APS RK S A +T K D R+ +A AL K+ +
Sbjct: 263 AAKPAQVKEEPSAPSSRKSSAAGTA---VTDSSKSADQLTHPSRKSVAKALVKLFVEQIT 319
Query: 226 EADEEIIDEVNACDPIR--------VAVSVESVMFEKLGRSTGAEKLKYRS----IMFNI 273
+A E ++ ++ +++S+ES M+E + TG YRS IMFN+
Sbjct: 320 QAQERGSFQLPEGSGVKSVEEFARQLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNV 379
Query: 274 RDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
+ KNP LR R+L+G ++P+ L MS ++MAS+E Q++ IK +A
Sbjct: 380 K--KNPSLRDRLLVGSLSPDALSKMSTQDMASEELQQKDAEIKREA 423
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 214 ELL-ANALSKVTSEADEEIIDEVNAC--DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIM 270
ELL N LS + D E+++E P +A +E+ +F+ G K K RS++
Sbjct: 359 ELLQGNGLSWAL-DLDTEVVNEGQKTVQSPQTLAFEIEAELFKLFGGVNKKYKEKGRSLL 417
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
FN++D NP+LR+RV+ GE++PERL +M+ EE+AS E
Sbjct: 418 FNLKDRNNPELRERVVAGEISPERLCSMTAEELASKE 454
>gi|325182938|emb|CCA17393.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189886|emb|CCA24366.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 12/143 (8%)
Query: 242 RVAVSVESVMFE------KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
++A+ VE+ +FE L ++ G K R ++FN+RD +N LR R++ GE++ L
Sbjct: 138 QIAMEVENQLFELYKECFTLPKAYGQ---KARQLLFNLRDSRNDLLRDRLMSGELSAAAL 194
Query: 296 VTMSPEEMASDERQRQIENIKEKALFECQRGG---EATATTDQFKCSRCGQRKCTYYQMQ 352
V MS EMA+ + +Q + +K +E R E+ +D F+C CG + Y Q +
Sbjct: 195 VRMSANEMANPQLVKQRKQWIKKRTYEVMRNAPDLESLTESDMFECRSCGCSRTRYRQWR 254
Query: 353 TRSADEPMTTYVTCVNCSKRWKF 375
++ + + C C RW+
Sbjct: 255 RKAIVDRTRIIIICTQCPYRWEL 277
>gi|183234876|ref|XP_648942.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169800868|gb|EAL43551.2| hypothetical protein EHI_055430 [Entamoeba histolytica HM-1:IMSS]
gi|407039077|gb|EKE39445.1| transcription factor S-II (TFIIS) domain containing protein
[Entamoeba nuttalli P19]
gi|449704587|gb|EMD44802.1| transcription elongation factor SII, putative [Entamoeba
histolytica KU27]
Length = 171
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 262 EKLKY--RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
EK + R I+ +R KN L + +VTP L+ MSP++MA + ++ IKE+
Sbjct: 55 EKFNFHLRQILAGLR--KNKKLVDNLCSKKVTPNELIEMSPDDMADE----AVKEIKERI 108
Query: 320 LFECQRGGEATATT-----DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+ + + + + ++FKC +CG RK QTRSADEPMT ++TC +C WK
Sbjct: 109 IKDEEDKKKPIDISKIPDNNEFKCGKCGSRKIQETLAQTRSADEPMTRFLTCASCGFFWK 168
Query: 375 F 375
Sbjct: 169 M 169
>gi|448928188|gb|AGE51759.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVM-1]
Length = 181
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL-FECQRGGEATATTD-QF 336
PDL ++ G+ + V P E+ SD+ E +AL F + D
Sbjct: 83 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARRALRFSDASSMDPADMADGML 142
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+C +C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 143 QCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 180
>gi|157953358|ref|YP_001498249.1| hypothetical protein AR158_C167L [Paramecium bursaria Chlorella
virus AR158]
gi|156068006|gb|ABU43713.1| hypothetical protein AR158_C167L [Paramecium bursaria Chlorella
virus AR158]
Length = 180
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE + + V P E+
Sbjct: 50 KKLGHDLKWDNFTFRNRYTQKILSVRYNIGLRR--DLLDKMKTGETSIKNFVNAKPWEIC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY++QTRS+DE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYELQTRSSDE 163
Query: 359 PMTTYVTCVNCSKRWK 374
PMT + C C RWK
Sbjct: 164 PMTVFAKCHACGARWK 179
>gi|448925723|gb|AGE49302.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus Br0604L]
Length = 185
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +NIR PD+ +++ G + ++
Sbjct: 51 VDFCKQREIALNWDNFAF----RNIYTQKI--LSVRYNIR--LRPDILEQMKAGNASIKQ 102
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ + +C +CG +K +Y
Sbjct: 103 FVYAKPYEICPEKWEEAFEQAAKRTL----RFSDASCMDPKDMPDGMLQCRKCGSKKTSY 158
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
Y++QTRSADEPMT + C C RWK
Sbjct: 159 YELQTRSADEPMTVFARCHECPNRWK 184
>gi|155371687|ref|YP_001427221.1| hypothetical protein ATCV1_Z740R [Acanthocystis turfacea Chlorella
virus 1]
gi|155125007|gb|ABT16874.1| hypothetical protein ATCV1_Z740R [Acanthocystis turfacea Chlorella
virus 1]
Length = 221
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +N+R PD+ +++ G + ++
Sbjct: 87 VDFCKQREIALNWDNFAF----RNIYTQKI--LSVRYNVR--LRPDILEQMKAGNASIKQ 138
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATAT------TDQFKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ +C +CG +K +Y
Sbjct: 139 FVYAKPYEICPEKWEEAFEQAAKRTL----RFSDASCIDPDSMPNGMLQCRKCGSKKTSY 194
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
Y++QTRSADEPMT + C +C RWK
Sbjct: 195 YELQTRSADEPMTVFARCHSCPNRWK 220
>gi|448926050|gb|AGE49628.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus Can0610SP]
Length = 221
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +NIR PD+ +++ G + ++
Sbjct: 87 VDFCKQREIALNWDNFAF----RNIYTQKI--LSVRYNIR--LRPDILEQMKAGTASIKQ 138
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ + +C +CG +K +Y
Sbjct: 139 FVYAKPYEICPEKWEEAFEQAAKRTL----RFSDASCMDPKDMPDGMLQCRKCGSKKTSY 194
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
Y++QTRSADEPMT + C C RWK
Sbjct: 195 YELQTRSADEPMTVFARCHECPNRWK 220
>gi|448936006|gb|AGE59555.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus OR0704.3]
Length = 180
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +NIR PD+ +++ G + ++
Sbjct: 46 VDFCKQREIALNWDNFAF----RNIYTQKI--LSVRYNIR--LRPDILEQMKAGTASIKQ 97
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD------QFKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ +C +CG +K +Y
Sbjct: 98 FVYAKPYEICPEKWEEAFEQAAKRTL----RFSDASCIDPDSMPDGMLQCRKCGSKKTSY 153
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
Y++QTRSADEPMT + C +C RWK
Sbjct: 154 YELQTRSADEPMTVFARCHSCPNRWK 179
>gi|448932545|gb|AGE56104.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus MO0605SPH]
gi|448933221|gb|AGE56778.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NE-JV-2]
gi|448936678|gb|AGE60225.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus WI0606]
Length = 221
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +N+R PD+ +++ G + ++
Sbjct: 87 VDFCKQREIALNWDNFAF----RNIYTQKI--LSVRYNVR--LRPDILEQMKAGNASIKQ 138
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTD------QFKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ +C +CG +K +Y
Sbjct: 139 FVYAKPYEICPEKWEEAFEQAAKRTL----RFSDASCIDPDSMPDGMLQCRKCGSKKTSY 194
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
Y++QTRSADEPMT + C +C RWK
Sbjct: 195 YELQTRSADEPMTVFARCHSCPNRWK 220
>gi|155370263|ref|YP_001425797.1| hypothetical protein FR483_N165L [Paramecium bursaria Chlorella
virus FR483]
gi|155123583|gb|ABT15450.1| hypothetical protein FR483_N165L [Paramecium bursaria Chlorella
virus FR483]
Length = 180
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ--- 335
PDL ++ G+ + V P E+ SD+ E K L R +A++ +
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARKTL----RFSDASSMDPENMP 137
Query: 336 ---FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
C +C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 138 DGMLTCGKCKSRKTSYYEMQTRSADEPMTVFAKCHTCGSRWK 179
>gi|297822507|ref|XP_002879136.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297826173|ref|XP_002880969.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324975|gb|EFH55395.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297326808|gb|EFH57228.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 324
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E+V+LF+AAKKAAD A GV SG E SRCVDAL L +T ++ +L L
Sbjct: 221 EMVKLFEAAKKAADVANAKGVLSGKAEASRCVDALSLLMEINITPKPKEPRRMMDKLEGL 280
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEE 89
TKH KI AS LL +W++ + E+
Sbjct: 281 TKHKDRKICHAASALLHLWRQRIREQ 306
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 225 SEADEEIIDE---VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDL 281
S DEE ID+ + D +AV +E +F+ G K K RS++FN++D+ NP+L
Sbjct: 3 SANDEEAIDKDSIIQKAD--DLAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPEL 60
Query: 282 RKRVLLGEVTPERLVTMSPEEMASDE 307
R+RVL G++TP+RL +M+ EE+AS E
Sbjct: 61 RERVLSGDITPDRLCSMTAEELASKE 86
>gi|157833931|pdb|1TFI|A Chain A, A Novel Zn Finger Motif In The Basal Transcriptional
Machinery: Three-Dimensional Nmr Studies Of The Nucleic-
Acid Binding Domain Of Transcriptional Elongation Factor
Tfiis
Length = 50
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 333 TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKFC 376
TD F C +C ++ CTY Q+QTRSADEPMTT+V C C RWKFC
Sbjct: 7 TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC 50
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ ++ E +VA+++E MF + K
Sbjct: 760 NSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVG---KVALNIEKEMFNLFHVTDNRYKS 816
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL GE++ +LV M PEE+ S E
Sbjct: 817 KYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSKE 859
>gi|448934703|gb|AGE58255.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NY-2B]
gi|448935075|gb|AGE58626.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NYs1]
Length = 180
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE + + V P E+
Sbjct: 50 KKLGHDLKWDNFTFRNRYTQKILSVRYNIGLRR--DLLDKMKTGETSIKNFVNAKPWEIC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY++QTRS+DE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYELQTRSSDE 163
Query: 359 PMTTYVTCVNCSKRWK 374
PM+ + C C RWK
Sbjct: 164 PMSVFAKCHACGARWK 179
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 242 RVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
+ A SVES M+ GR GA+ K KYRS+MFNI+D KN L +++ +V P++LV M+P
Sbjct: 1323 QFAKSVESEMYHSFGRDAGAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTP 1382
Query: 301 EEMAS--------DERQRQIENIKEKAL 320
E++AS +E + Q++ IK+ L
Sbjct: 1383 EQLASQELAKWREEENRHQLDMIKKSEL 1410
>gi|448934258|gb|AGE57812.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NTS-1]
Length = 185
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG 327
S+ +NIR PD+ +++ G + ++ V P E+ ++ + E ++ L R
Sbjct: 78 SVRYNIR--LRPDILEQMKAGTASIKQFVYAKPYEICPEKWEEAFEQAAKRTL----RFS 131
Query: 328 EATATTD------QFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+A+ +C +CG +K +YY+MQTRS DEPMT Y C C+ RWK
Sbjct: 132 DASCIDPDSMPDGMLQCRKCGSKKTSYYEMQTRSCDEPMTVYARCHACTNRWK 184
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 225 SEADEEIIDE---VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDL 281
S DEE ID+ + D +AV VE +F+ G K K RS++FN++D+ NP+L
Sbjct: 3 SANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPEL 60
Query: 282 RKRVLLGEVTPERLVTMSPEEMASDE 307
R+RVL G++TP+RL +M+ EE+AS E
Sbjct: 61 RERVLSGDITPDRLCSMTAEELASKE 86
>gi|171473978|gb|AAW27827.2| SJCHGC09118 protein [Schistosoma japonicum]
Length = 309
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 94/208 (45%), Gaps = 41/208 (19%)
Query: 188 PSQGTIATPKLTQLIKCNDSS----RDKIRELLANALSKVTS-EADEEIIDEVNACDPIR 242
P+ ++ TP L C DSS R K +LL AL TS EA+ + D
Sbjct: 113 PATTSLDTPPL-----CKDSSDLSLRTKCIQLLHGALDPETSKEAEGKTADLARV----- 162
Query: 243 VAVSVESVMFEKLGRSTGAEKLKY----RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ V + ++ A + KY RS + N+R+ KN LR +L G + PE M
Sbjct: 163 IEVHIHALHH--------ANQAKYKACIRSKVTNLRNPKNGHLRCGLLGGSLGPEVFARM 214
Query: 299 SPEEMASDERQRQIENIKEKALFECQ--RGGEATATTDQFKCSRCGQRKCTYYQ------ 350
S EEMA++E QR E + + E Q +G E T T + +C RC C Q
Sbjct: 215 SLEEMANEELQRLREEYSSQGVSERQLPQGVEGTP-TQKLRCRRCDGSDCRVTQVSRGTL 273
Query: 351 -----MQTRSADEPMTTYVTCVNCSKRW 373
++ +AD+ T+VTC C ++W
Sbjct: 274 FLPAWVRQATADQDAMTFVTCSRCGEQW 301
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N+ R IR L + L K S++D+ + E R+AV++E MF + K
Sbjct: 658 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVG---RLAVAIEKEMFNLCLSTDSKYKN 714
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRS+MFN++D KN L RV+ GEV+P RLV +S EE+ S E
Sbjct: 715 KYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKE 757
>gi|448930116|gb|AGE53682.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus GM0701.1]
Length = 186
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +N+R PD+ +++ G + ++
Sbjct: 51 VDFCKQREIALNWDNFAF----RNIYTQKI--LSVRYNVR--LRPDILEQMKAGNASIKQ 102
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ + +C +CG +K +Y
Sbjct: 103 FVYAKPYEICPEKWEEAFEQAAKRTL----RFSDASCMDPKDMPDGMLQCRQCGSKKTSY 158
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
YQ+QTRSADE +TTY C C+ RWK
Sbjct: 159 YQLQTRSADEGITTYARCHECNNRWK 184
>gi|7521741|pir||S47662 transcription elongation factor TFIIS homolog - Chlorella virus
CV-U1
Length = 180
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE + + V P E+
Sbjct: 50 KKLGHELKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLDKMKTGETSVKNFVNAKPWEVC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQ R++DE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQCRASDE 163
Query: 359 PMTTYVTCVNCSKRWK 374
PMT + C +C RWK
Sbjct: 164 PMTVFAKCHSCGSRWK 179
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ ++ E +VA+++E MF + K
Sbjct: 847 NSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVG---KVALNIEKEMFNLFQVTDNRYKS 903
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL GE++ +LV M PEE+ S E
Sbjct: 904 KYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSKE 946
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 194 ATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE 253
A+P +Q N R IR L L K S++D+ I+ E RVA+ +E MF
Sbjct: 665 ASPAPSQ---PNSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---RVALRIEKEMFS 718
Query: 254 KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
+ K KYRSIMFN++D KN L RVL E++ +LV M PEE+AS E
Sbjct: 719 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELASKE 772
>gi|302842544|ref|XP_002952815.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
gi|300261855|gb|EFJ46065.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
Length = 233
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 15/125 (12%)
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE 322
K R+++ +++ +N DLR+RVL G+V P+ LV M ++A+ ++Q + ++E+
Sbjct: 107 KAAARTLVASLK--RNADLRRRVLSGQVRPDELVGMGVRQLATPQQQEEYARLQERETRR 164
Query: 323 CQRGGEATA---TTDQFKCSRCGQRKCTYYQMQTR---------SADEPMTT-YVTCVNC 369
G +A +T + C RCG R C Y R S D P ++ VTC+ C
Sbjct: 165 VTLAGHGSAASISTSDYVCGRCGGRSCDYLDSGRRDIGKCETWGSKDGPGSSRLVTCLGC 224
Query: 370 SKRWK 374
RW+
Sbjct: 225 GHRWE 229
>gi|395526959|ref|XP_003765621.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sarcophilus harrisii]
Length = 352
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 37/254 (14%)
Query: 140 EKTGSVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQ-----GTIA 194
E + S S+ +T+ + N +SV+ + K K+ E A V + S+ G+ +
Sbjct: 112 ENSPSQSQEQTLDI----ANSNSVLLSQDVAKDNKLFVPENSAAPVEEHSEDPKSIGSKS 167
Query: 195 TPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEK 254
T D +R K ELL AL V+ D++ D ++A +E +F
Sbjct: 168 TWH-------QDPTRAKCVELLYGAL--VSYATDQQKTDHCQ-----KLAKEIEGHIFAL 213
Query: 255 LGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIEN 314
++ K RS + N++++KN L++ + G ++P+ M+ EMA+DE +Q+
Sbjct: 214 YSKNLKKYKNCIRSKLSNLKNQKNSHLQQNLFSGALSPKEFAEMTVMEMANDEL-KQLRA 272
Query: 315 IKEKALFECQRGGEAT--ATTDQFKCSRCGQRKC---------TYYQMQTRSA--DEPMT 361
K+ + +A T++ KC RC + C + RSA DE M
Sbjct: 273 SYTKSCIQEHYFPQAIDGTQTNKIKCRRCEKFNCKVTVIARGILFLPSWVRSANPDEQMM 332
Query: 362 TYVTCVNCSKRWKF 375
TYV C C ++W +
Sbjct: 333 TYVICNECGEQWYY 346
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
P +A +E+ +F+ G K K RS++FN++D NP+LR+RV+ GE++PERL +M+
Sbjct: 405 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 464
Query: 300 PEEMASDE 307
EE+AS E
Sbjct: 465 AEELASKE 472
>gi|15226245|ref|NP_180346.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|3860254|gb|AAC73022.1| hypothetical protein [Arabidopsis thaliana]
gi|330252949|gb|AEC08043.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 368
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E+V+LF+AAKKAAD A GV SG E SRC+DAL L +T ++ +L L
Sbjct: 261 EMVKLFEAAKKAADVANAKGVLSGKAEASRCIDALSVLMKINITPKPKEPRRMMDKLEGL 320
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEE 89
TKH I VAS LL +W++ + E+
Sbjct: 321 TKHKDRMICHVASALLHLWRQRIREQ 346
>gi|448933550|gb|AGE57106.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus NE-JV-3]
Length = 221
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +N+R PD+ +++ G + ++
Sbjct: 87 VDFCKQREIALNWDNFAF----RNIYTQKI--LSVRYNVR--LRPDILEQMKAGTASIKQ 138
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ + C +CG +K +Y
Sbjct: 139 FVYAKPYEICPEKWEEAFEQAAKRTL----RFSDASCMDPKDMPDGMLTCRKCGSKKTSY 194
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
Y++QTRSADEPMT + C C RWK
Sbjct: 195 YELQTRSADEPMTVFARCHECPNRWK 220
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
P +A +E+ +F+ G K K RS++FN++D NP+LR+RV+ GE++PERL +M+
Sbjct: 405 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 464
Query: 300 PEEMASDE 307
EE+AS E
Sbjct: 465 AEELASKE 472
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N+ R IR L + L K S++D+ + E R+A ++E MF + K
Sbjct: 639 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVG---RLAFAIEKEMFNLCLNTDSKYKN 695
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRS+MFN++D KN L RV+ G+VTP RLV +S EE+ S E
Sbjct: 696 KYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLSKE 738
>gi|448936359|gb|AGE59907.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus TN603.4.2]
Length = 185
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +N+R PD+ +++ G + ++
Sbjct: 51 VDFCKQREIALNWDNFAF----RNIYTQKV--LSVRYNVR--LRPDVLEQMKAGTASIKQ 102
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTY 348
V P E+ ++ + E ++ L R +A+ + +C +CG +K +Y
Sbjct: 103 FVYAKPYEICPEKWEEAFEKAAKRTL----RFSDASCMDPKDMPDGMLQCRKCGSKKTSY 158
Query: 349 YQMQTRSADEPMTTYVTCVNCSKRWK 374
Y++QTRSADEPMT + C C RWK
Sbjct: 159 YELQTRSADEPMTVFARCHECPNRWK 184
>gi|348680251|gb|EGZ20067.1| hypothetical protein PHYSODRAFT_495059 [Phytophthora sojae]
Length = 118
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
K R+++FN++D +N DLR R++ GE+ LV M+ +MA+ + RQ + K E
Sbjct: 6 KARTLLFNLKDSRNVDLRNRLVSGELPSHSLVRMNGRDMANPQLVRQRKEWIRKRTHEVM 65
Query: 325 RGGEATA--TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
R G +D F+C CG + Y Q + ++ + V C+ C RW+
Sbjct: 66 RDGREAEGFESDLFECRNCGSSRTRYRQWRRKAVVDRTRIIVICLRCPNRWEL 118
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
P + + P L+Q N R IR L L K +++D+ I+ E ++A+ +
Sbjct: 646 PGRLGTSNPALSQP---NSQIRQNIRRSLKEILWKRVNDSDDLIMTESEVG---KIALHI 699
Query: 248 ESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
E MF + K +YRSIMFN++D KN L RVL E++ +LV M PEE+AS E
Sbjct: 700 EKEMFNLFQVTDNRYKSRYRSIMFNLKDPKNQGLFHRVLREEISSAKLVRMKPEELASKE 759
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIR----VAVSVESVMFEKLGRSTGAEKLKYR 267
+ E LA + SK ADE +D V++ I+ +A+ +E +F+ G K + R
Sbjct: 316 VTESLAESGSKRMKSADEAAMD-VDSNSIIQKAESLALRIEEELFKLFGGVNKKYKERGR 374
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
S++FN++D+ NP+LR RVL G++ PERL +M+ EE+AS E
Sbjct: 375 SLLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEELASKE 414
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 213 RELLANALSKVTSEADEEIIDEVNACDPIR----VAVSVESVMFEKLGRSTGAEKLKYRS 268
+E+L + L K+ D I ++ P++ +A+ +E +F+ K K RS
Sbjct: 342 KEILTDELQKI----DVGIGNQNQVAKPVQTPESLALKIEEELFKLFSGVNKKYKEKGRS 397
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
++FN++D NP+LR+RV+ GE+TPERL +M+ EE+AS E
Sbjct: 398 LLFNLKDRNNPELRERVMSGEITPERLCSMTAEELASKE 436
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R +++E L AL ++ ++ E + P VA +E+ MF+ G + RS
Sbjct: 342 RREMKESLTRALEELKAKGHEGDLPA-----PDMVAQRIEATMFKHFGGVNKEYGARNRS 396
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIE 313
I FN+ D+ NPD R +VL G++ P +L+TM +EMAS+ +R +E
Sbjct: 397 IQFNLADKSNPDFRAKVLRGDLEPAKLMTMHTQEMASELERRTVE 441
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E+ +F+ G K K RS++FN++D NP+LR++V+ GE+TP RL +M
Sbjct: 390 DPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSM 449
Query: 299 SPEEMASDE 307
+ EE+AS E
Sbjct: 450 TAEELASKE 458
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 21/160 (13%)
Query: 176 IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKV----TSEADEEI 231
++EE APS RK S A +T K D R+ +A AL K+ ++A E
Sbjct: 321 VKEEPSAPSSRKSSAAGTA---VTDSSKSADQLTHPSRKSVAKALVKLFVEQITQAQERG 377
Query: 232 IDEVNACDPIR--------VAVSVESVMFEKLGRSTGAEKLKYRS----IMFNIRDEKNP 279
++ ++ +++S+ES M+E + TG YRS IMFN++ KNP
Sbjct: 378 SFQLPEGSGVKSVEEFARQLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNP 435
Query: 280 DLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
LR R+L+G ++P+ L MS ++MAS+E Q++ IK +A
Sbjct: 436 SLRDRLLVGSLSPDALSKMSTQDMASEELQQKDAEIKREA 475
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 21/160 (13%)
Query: 176 IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKV----TSEADEEI 231
++EE APS RK S A +T K D R+ +A AL K+ ++A E
Sbjct: 257 VKEEPSAPSSRKSSAAGTA---VTDSSKSADQLTHPSRKSVAKALVKLFVEQITQAQERG 313
Query: 232 IDEVNACDPIR--------VAVSVESVMFEKLGRSTGAEKLKYRS----IMFNIRDEKNP 279
++ ++ +++S+ES M+E + TG YRS IMFN++ KNP
Sbjct: 314 SFQLPEGSGVKSVEEFARQLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNP 371
Query: 280 DLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
LR R+L+G ++P+ L MS ++MAS+E Q++ IK +A
Sbjct: 372 SLRDRLLVGSLSPDALSKMSTQDMASEELQQKDAEIKREA 411
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 184 SVRKPSQGTIA--TPKLTQLIKCNDSS-------RDKIRELLANALSKVTSEADEEIIDE 234
+VRKP+ ++ +P +L+ N + R IR L L K +++D+ I+ E
Sbjct: 635 AVRKPAAASVPLTSPAPGRLVTSNPALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE 694
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++A+ +E MF+ + K KYRSIMFN++D KN L RVL E++ +
Sbjct: 695 SEVG---KIALHIEKEMFQLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAK 751
Query: 295 LVTMSPEEMASDE 307
LV M PEE+ S E
Sbjct: 752 LVRMKPEELVSKE 764
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 184 SVRKPSQGTIA--TPKLTQLIKCNDSS-------RDKIRELLANALSKVTSEADEEIIDE 234
+VRKP+ ++ +P +L+ N + R IR L L K +++D+ I+ E
Sbjct: 635 AVRKPAAASVPLTSPAPGRLVTSNPALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE 694
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++A+ +E MF+ + K KYRSIMFN++D KN L RVL E++ +
Sbjct: 695 SEVG---KIALHIEKEMFQLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAK 751
Query: 295 LVTMSPEEMASDE 307
LV M PEE+ S E
Sbjct: 752 LVRMKPEELVSKE 764
>gi|195500468|ref|XP_002097386.1| GE26190 [Drosophila yakuba]
gi|194183487|gb|EDW97098.1| GE26190 [Drosophila yakuba]
Length = 2001
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
SVE MF GR GA+ K KYRS+MFNI+D KN L +++ +V P++LV M+PE++A
Sbjct: 1311 SVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLA 1370
Query: 305 S--------DERQRQIENIKEKAL 320
S +E + Q++ IK+ L
Sbjct: 1371 SQELAKWREEENRHQLDMIKKSEL 1394
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
SVE MF GR GA+ K KYRS+MFNI+D KN L +++ +V P++LV M+PE++A
Sbjct: 1316 SVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLA 1375
Query: 305 S--------DERQRQIENIKEKAL 320
S +E + Q++ IK+ L
Sbjct: 1376 SQELAKWREEENRHQLDMIKKSEL 1399
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R +R+ L + L++ E+D I E + VA E +F + K KYRS
Sbjct: 628 RRSVRDSLKDILTQRLKESDLHISVERAS----EVAKKTERELFHLFKDTDHKYKNKYRS 683
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQ 311
++FN++D KN L KRVL GE++P L+ MSPEE+AS E RQR+
Sbjct: 684 LIFNLKDTKNNVLFKRVLKGEISPANLIRMSPEELASKELAAWRQRE 730
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 238 CDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
DP +A +E+ +F+ G K K RS++FN++D+ NP LR++V+ GE+ ERL +
Sbjct: 263 LDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCS 322
Query: 298 MSPEEMASDE----RQRQIENIKEKALFE 322
MS EE+AS E RQ + E + + + +
Sbjct: 323 MSAEELASKELAEWRQAKAEEMAQMVVLQ 351
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Query: 192 TIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM 251
T A+P +Q N R IR L L K +++D+ ++ E +VA+++E M
Sbjct: 675 TSASPAQSQ---PNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVG---KVALNIEKEM 728
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
F + K KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 729 FNLFQGTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLSKLVRMKPEELLSKE 784
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K+R + AL V +EA E +P A +VE+ +F+ G +T K K+R+
Sbjct: 368 RQKVRGGIQQALELVATEAAGE---AGRLPEPAPTAEAVEAALFKLYGGTTKDYKQKFRT 424
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
+ FN++D NPDLR VL G++ P+ V M+ E+A+ E + +E+AL
Sbjct: 425 LQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELANKELAAYRKAKEEEAL 476
>gi|440796699|gb|ELR17808.1| transcription factor SII (TFIIS) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 168
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 13/113 (11%)
Query: 267 RSIMFNIRDEK--NPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ 324
S+ N+ D K NP L K +L+ ++ E+L TM +M R ++ KE A +C
Sbjct: 65 HSMHTNLIDAKGHNPQLHKSMLISIMSLEQLATMRHTDMFPSLHTRTLKP-KEVAKPKCS 123
Query: 325 RGGEATATTDQFKCSR--CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWKF 375
G F+C++ C TYYQ+QTRSA++P+TT++ C C+ +++F
Sbjct: 124 HG--------MFQCNKRDCHSWFTTYYQLQTRSANKPLTTFMQCTQCNNQYRF 168
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSIM 270
+R + +A+ +V +E+ D V + + + +A +E+ +F+ ++ K KYRS++
Sbjct: 561 VRGTVVHAMQEVLWSRLQELPDLVLSEEAVEGIAAGIETALFDLTQATSCRYKTKYRSLL 620
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEAT 330
FN+RD +NPDL +V+ G+VTP LV MS ++A E R + +++ L ++ +
Sbjct: 621 FNLRDPRNPDLFLKVVQGDVTPHDLVRMSTAQLAPQELARWRDQEEKRGLEIIEQQQKEP 680
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCS 370
+ FK + G+ + QT + ++ + + V+ ++CS
Sbjct: 681 CSLPAFKLTHKGEVEILRDVDQTLTLEDLVGSMVS-IDCS 719
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E+ +F+ G K K RS++FN++D+ NP LR++V+ GE+ ERL +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 299 SPEEMASDE----RQRQIENIKEKALFE 322
S EE+AS E RQ + E + + + +
Sbjct: 375 SAEELASKELAEWRQAKAEEMAQMVVLQ 402
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E+ +F+ G K K RS++FN++D+ NP LR++V+ GE+ ERL +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 299 SPEEMASDE----RQRQIENIKEKALFE 322
S EE+AS E RQ + E + + + +
Sbjct: 375 SAEELASKELAEWRQAKAEEMAQMVVLQ 402
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 192 TIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVM 251
++A+ K L S RD ++E+L L ++D I E + +A +E +
Sbjct: 680 SLASKKPVSLEAIRRSVRDSLKEILIQRLK----DSDLNISVERAS----ELAKKIEREL 731
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE---- 307
F + K KYRS+MFN++D KN L KRVL GE++P L+ MSPEE+AS E
Sbjct: 732 FHLYKDTDNKYKNKYRSLMFNLKDTKNNILCKRVLKGEISPANLIRMSPEELASKELAAW 791
Query: 308 RQRQ 311
RQR+
Sbjct: 792 RQRE 795
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 238 CDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
DP +A +E+ +F+ G K K RS++FN +D+ NP LR++V+ GE+ ERL +
Sbjct: 295 LDPQVLAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCS 354
Query: 298 MSPEEMASDE----RQRQIENIKEKALFE 322
MS EE+AS E RQ + E + + + +
Sbjct: 355 MSAEELASKELAEWRQAKAEEMAQMVVLQ 383
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 69/116 (59%), Gaps = 9/116 (7%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSIM 270
+R + +A+ +V +E+ D V + + + +A +E+ +F ++ K KYRS++
Sbjct: 561 VRNTVVHAMQEVLRSRLQELPDLVLSEEAVEGIAAGIETALFNLTQTTSCRYKTKYRSLL 620
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMS-----PEEMA---SDERQRQIENIKEK 318
FN+RD +NPDL +V+ G+VTPE LV MS P+E+A E +R +E I+++
Sbjct: 621 FNLRDPRNPDLFLKVVRGDVTPEDLVQMSSIQLAPQELACWRDQEEKRGLEIIEQQ 676
>gi|261338797|gb|ACX70080.1| UT01587p [Drosophila melanogaster]
Length = 1144
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 117/256 (45%), Gaps = 48/256 (18%)
Query: 105 VTTGVVKPDSGKIDK-VQKTSAVKVEKVSTAETVKVEK---------TGSVSRSETVQVE 154
V TG + P + + K +Q+ + +V T ++ EK S S + V
Sbjct: 283 VITGHMAPSAHQFRKWLQENPSFEVLPSGTVQSADAEKRLLKGAPEAATSTSEPAVLGVA 342
Query: 155 KKETNGDSVMDRGEAVKVEKIIE-------------EEKQAPSVRKPSQGTIAT--PKLT 199
KK G + + + V+ + +EK P+V+ P+ IA P+
Sbjct: 343 KKPPEGPAKLSHPQNTTVQASHQLGISSVRPLAKKDKEKTTPTVQAPTPNRIAAGKPEPV 402
Query: 200 QLIKCNDSSRDKIRELLANALSKVT-SEADEEIIDEVNACDPIRVAV-----SVESVMFE 253
++ R +RE L L+++ ++A EE + P + V +VE MF
Sbjct: 403 RI-----GIRRSLREQL---LARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFN 454
Query: 254 KLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS------- 305
GR GA+ K KYRS+MFNI+D KN L +++ +V P +LV M+PE++AS
Sbjct: 455 SFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWR 514
Query: 306 -DERQRQIENIKEKAL 320
+E + Q++ IK+ L
Sbjct: 515 EEENRHQLDMIKKSEL 530
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E +F+ G K K RS++FN++D+ NP+LR+RVL G++ PERL +M+ EE
Sbjct: 344 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTAEE 403
Query: 303 MASDE 307
+AS E
Sbjct: 404 LASKE 408
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
P +A +E+ +F+ G K K RS++FN++D NP+LR+RV+ G++ PE+L +M+
Sbjct: 363 PKLLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPEQLCSMT 422
Query: 300 PEEMASDE 307
EE+AS E
Sbjct: 423 AEELASKE 430
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E +F+ G K K RS++FN++D+ NP+LR+RVL G++ PERL +M+ EE
Sbjct: 341 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 400
Query: 303 MASDE 307
+AS E
Sbjct: 401 LASKE 405
>gi|71424226|ref|XP_812723.1| transcription elongation factor-like protein [Trypanosoma cruzi
strain CL Brener]
gi|70877539|gb|EAN90872.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi]
Length = 477
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+ T FKC CG+ +C+YY+ QTRSADEP T +VTC+ C W
Sbjct: 432 SVTSLFKCPNCGKNRCSYYEQQTRSADEPTTKFVTCLECKYVW 474
>gi|71409051|ref|XP_806892.1| transcription elongation factor S-II [Trypanosoma cruzi strain CL
Brener]
gi|70870766|gb|EAN85041.1| transcription elongation factor S-II, putative [Trypanosoma cruzi]
Length = 477
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+ T FKC CG+ +C+YY+ QTRSADEP T +VTC+ C W
Sbjct: 432 SVTSLFKCPNCGKNRCSYYEQQTRSADEPTTKFVTCLECKYVW 474
>gi|195055893|ref|XP_001994847.1| GH13879 [Drosophila grimshawi]
gi|193892610|gb|EDV91476.1| GH13879 [Drosophila grimshawi]
Length = 2061
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 247 VESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
VES M+ GR GA+ K KYRS++FNIRD KN L +++ +V P++LV M+P E+AS
Sbjct: 1339 VESEMYHSFGRDVGAKYKSKYRSLIFNIRDRKNKTLFEKICAKQVEPKQLVRMTPSELAS 1398
Query: 306 DE--RQRQIEN 314
E + R+ EN
Sbjct: 1399 QELAKWREEEN 1409
>gi|407866945|gb|EKG08471.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi]
Length = 477
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+ T FKC CG+ +C+YY+ QTRSADEP T +VTC+ C W
Sbjct: 432 SVTSLFKCPNCGKNRCSYYEQQTRSADEPTTKFVTCLECKYVW 474
>gi|407393614|gb|EKF26679.1| transcription elongation factor-like protein, putative [Trypanosoma
cruzi marinkellei]
Length = 477
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+ T FKC CG+ +C+YY+ QTRSADEP T +VTC+ C W
Sbjct: 432 SVTSLFKCPNCGKNRCSYYEQQTRSADEPTTKFVTCLECKYVW 474
>gi|121699592|ref|XP_001268072.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119396214|gb|EAW06646.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 853
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++ +S+E M++ + G T A KL+ R+++FN++ KNP LR R+L+G + P++L
Sbjct: 293 QLGLSIEKAMYQNICGGSGEPTEAYKLQLRTVLFNVK--KNPSLRDRLLVGSLLPDKLSQ 350
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 351 MSSQDMASEELQQKDAEIKREA 372
>gi|225557325|gb|EEH05611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 892
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 29/181 (16%)
Query: 152 QVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDK 211
Q+E E +V R ++V + ++E+K S R P++GT L L + N
Sbjct: 237 QIESPEVKSPTVH-RKQSVSSVQYVQEQK---SGRSPTEGTGGPSDLQSLARRN------ 286
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPI---------RVAVSVESVMFEKL----GRS 258
+ANAL K+ E + + P + V++E M++ L G
Sbjct: 287 ----VANALVKLFVEQAASALQQGAYSMPAGKTKEAVGEALGVAIEHAMYKHLCGGSGEP 342
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
+ A K + R+I+FN+R KN LR +L+G ++P+ L TMS ++MAS E +++ + IK +
Sbjct: 343 SEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKRE 400
Query: 319 A 319
A
Sbjct: 401 A 401
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
P VA ++E+ ++ G K K RS++FN++D NP+LR RV+ GE+ PE+L +M+
Sbjct: 391 PQTVASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLCSMT 450
Query: 300 PEEMASDE 307
EE+AS E
Sbjct: 451 AEELASKE 458
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E +F LG K K RS++FN++D+ NP LR RVL G++TP+RL +M+ EE
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 382
Query: 303 MASDE 307
+AS E
Sbjct: 383 LASKE 387
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 228 DEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLL 287
DE + EV DP +A +E+ +F+ G K K RS++FN++D NP+LR++V+
Sbjct: 270 DEYVGKEV-VRDPRVLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELREKVMS 328
Query: 288 GEVTPERLVTMSPEEMASDE 307
GE+ P RL +M+ EE+AS E
Sbjct: 329 GEIPPGRLCSMTAEELASKE 348
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E +F+ G K K RS++FN++D+ NP+LR+ V+ G+++PERL M
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 299 SPEEMASDE----RQRQIENIKE 317
+ EE+AS E RQ + E + E
Sbjct: 419 TAEELASKELSQWRQAKAEEMAE 441
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N+ R IR L + L K ++D+ + E R+A ++E MF + K
Sbjct: 734 NNQMRQNIRRSLTDILYKRVCDSDDLKMTESEVG---RLAFAIEKEMFNLCLSTDSKYKN 790
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRS+MFN++D KN L RV+ GEV+P RLV +S EE+ S E
Sbjct: 791 KYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKE 833
>gi|386765657|ref|NP_001247075.1| protein partner of snf, isoform B [Drosophila melanogaster]
gi|383292673|gb|AFH06393.1| protein partner of snf, isoform B [Drosophila melanogaster]
Length = 2018
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+VE MF GR GA+ K KYRS+MFNI+D KN L +++ +V P +LV M+PE++A
Sbjct: 1321 NVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLA 1380
Query: 305 S--------DERQRQIENIKEKAL 320
S +E + Q++ IK+ L
Sbjct: 1381 SQELAKWREEENRHQLDMIKKSEL 1404
>gi|24646283|ref|NP_650193.1| protein partner of snf, isoform A [Drosophila melanogaster]
gi|7299622|gb|AAF54807.1| protein partner of snf, isoform A [Drosophila melanogaster]
Length = 2016
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+VE MF GR GA+ K KYRS+MFNI+D KN L +++ +V P +LV M+PE++A
Sbjct: 1319 NVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLA 1378
Query: 305 S--------DERQRQIENIKEKAL 320
S +E + Q++ IK+ L
Sbjct: 1379 SQELAKWREEENRHQLDMIKKSEL 1402
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E +F+ G K K RS++FN++D+ NP+LR+ V+ G+++PERL M
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 299 SPEEMASDE----RQRQIENIKE 317
+ EE+AS E RQ + E + E
Sbjct: 419 TAEELASKELSQWRQAKAEEMAE 441
>gi|195329544|ref|XP_002031470.1| GM24029 [Drosophila sechellia]
gi|194120413|gb|EDW42456.1| GM24029 [Drosophila sechellia]
Length = 2010
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+VE MF GR GA+ K KYRS+MFNI+D KN L +++ +V P +LV M+PE++A
Sbjct: 1317 NVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLA 1376
Query: 305 S--------DERQRQIENIKEKAL 320
S +E + Q++ IK+ L
Sbjct: 1377 SQELAKWREEENRHQLDMIKKSEL 1400
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Query: 242 RVAVSVESVMFEKL----GRSTG-AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLV 296
++ +SVE +++ L G +T A K++ R+I+FN++ KNP LR R+L+G +TP+ L
Sbjct: 323 QLGISVEEALYQNLMGGGGEATSEAYKIQLRAILFNVK--KNPSLRDRLLVGSLTPDALS 380
Query: 297 TMSPEEMASDERQRQIENIKEKA 319
MS +EMAS+E Q++ IK +A
Sbjct: 381 RMSSQEMASEELQQKDAEIKREA 403
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEI 231
K + ++KQ + PS AT K + S RD ++E+L L E++ I
Sbjct: 627 THKTVIQQKQETKSKPPSS---ATKKPVSVEAIRRSVRDSLKEILIQRLK----ESNLSI 679
Query: 232 IDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVT 291
E A D VA +E +F + K KYRS+MFN++D KN L K+VL GE++
Sbjct: 680 SVE-KASD---VAKKIERELFHLNKDTDNKYKNKYRSLMFNLKDTKNNVLYKKVLKGEIS 735
Query: 292 PERLVTMSPEEMASDE 307
P L+ MSPEE+AS E
Sbjct: 736 PGNLIRMSPEELASKE 751
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 194 ATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE 253
A+P +Q N R IR L L K +++D+ I+ E ++A+ +E MF
Sbjct: 697 ASPSQSQ---PNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 750
Query: 254 KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
+ K KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 751 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 804
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 194 ATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE 253
A+P +Q N R IR L L K +++D+ I+ E ++A+ +E MF
Sbjct: 695 ASPSQSQ---PNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 748
Query: 254 KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
+ K KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 749 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 802
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSIM 270
+R + +A+ +V +E+ D V + + + +A +E+ +F+ + K KYRS++
Sbjct: 570 VRGAVVHAMREVLWSRLQELPDLVLSEEAVGGIAADIEAALFDLTQATNCRYKTKYRSLL 629
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEAT 330
FN+RD +NPDL +VL G+VTP LV MS ++A E R + +++ L ++ +
Sbjct: 630 FNLRDPRNPDLFLKVLQGDVTPHGLVRMSSTQLAPQELARWRDQEEKRGLEIIEQQQKKP 689
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCS 370
+ FK + G+ + QT + ++ +T + ++ S
Sbjct: 690 CSLPAFKLTHKGEVEIPRDGDQTLTLEDLITGPMVSIDSS 729
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 682 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 738
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 739 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 781
>gi|186504949|ref|NP_180888.2| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|91805477|gb|ABE65467.1| hypothetical protein At2g33300 [Arabidopsis thaliana]
gi|330253717|gb|AEC08811.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 276
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
+++L+ELF+ AKK+AD A G+ + E S CVD L L FP++ + + ++ RL
Sbjct: 179 DKDLLELFEIAKKSADFANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRLE 238
Query: 62 PLTKHPREKIQIVASNLLDIWKKIVIEETTR 92
LTKH KI S LL W++ + ++ R
Sbjct: 239 NLTKHKNRKICNSVSKLLQCWRQSIRDQQLR 269
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 12/115 (10%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMF 271
+R L S+V D + +EV +A +E+ +F+ ++ K+KYRS++F
Sbjct: 523 VRALWEALWSRVQELPDLGLSEEVVE----GIAAGIEAALFDLTQGTSCRYKIKYRSLLF 578
Query: 272 NIRDEKNPDLRKRVLLGEVTPERLVTM-----SPEEMA---SDERQRQIENIKEK 318
N+RD +NPDL +V+ G+VTP LV M +P+E+A E +R +E I ++
Sbjct: 579 NLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQLAPQELARWRDQEEKRGLEIIAQQ 633
>gi|2459413|gb|AAB80648.1| hypothetical protein [Arabidopsis thaliana]
Length = 265
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 2 EQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLR 61
+++L+ELF+ AKK+AD A G+ + E S CVD L L FP++ + + ++ RL
Sbjct: 168 DKDLLELFEIAKKSADFANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRLE 227
Query: 62 PLTKHPREKIQIVASNLLDIWKKIVIEETTR 92
LTKH KI S LL W++ + ++ R
Sbjct: 228 NLTKHKNRKICNSVSKLLQCWRQSIRDQQLR 258
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E +F LG K K RS++FN++D+ NP LR RVL G++TP+RL +M+ EE
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
Query: 303 MASDE 307
+AS E
Sbjct: 140 LASKE 144
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
P +A +E+ +F+ G K K RS++FN++D NP+LR+RV+ G++ PE+L +M+
Sbjct: 393 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMT 452
Query: 300 PEEMASDE 307
EE+AS E
Sbjct: 453 AEELASKE 460
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ ++ E ++A+++E MF + K
Sbjct: 829 NSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVG---KIALNIEKEMFNLFHATDNRYKS 885
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL ++ RLV M PEE+ S E
Sbjct: 886 KYRSIMFNLKDPKNQGLFHRVLREDLPLSRLVRMKPEELLSKE 928
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K S++D+ I+ E ++A+ +E MF + K
Sbjct: 670 NSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---KIALHIEKEMFNLFRVTDNRYKS 726
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 727 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 769
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 213 RELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMF 271
R LL L++V D + V A D RV+ VE ++ KL TGA+ K KYR+++F
Sbjct: 301 RTLLDVLLTRVKKAPD---VKNVTADDVKRVSKQVEFELY-KLFNDTGAKYKAKYRTLIF 356
Query: 272 NIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
NI+D KN L + +L GE++P LV MS +++AS E
Sbjct: 357 NIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQE 392
>gi|448935448|gb|AGE58998.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus OR0704.2.2]
Length = 180
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 260 GAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
A K S+ +N++ PDL ++ G+ + V P E+ SD+ E +A
Sbjct: 65 NAYTQKILSVRYNLK--LRPDLMDKMKTGDCSIRWFVNAKPWEICSDKWTEAFEAAARRA 122
Query: 320 LF--ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
L + A CS+C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 123 LRFSDASSMDPADMPDGMLTCSKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 179
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 188 PSQGTIAT--PKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
P+ G + T P L+Q N R IR L L K +++D+ I+ E ++A+
Sbjct: 650 PAPGRLGTSSPALSQP---NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIAL 703
Query: 246 SVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
+E +F + K KYRSIMFN++D KN L RVL E++ +LV M PEE+ S
Sbjct: 704 HIEKELFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 763
Query: 306 DE 307
E
Sbjct: 764 KE 765
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 124 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 180
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 181 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 223
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 10/137 (7%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEI 231
E + E+K+ P KP G P L QL S +++R +A++L +V + +E
Sbjct: 737 AEPKVREQKKRPPKEKPLPGP--APPL-QL------SGEQVRSAVADSLREVLLKRLQEP 787
Query: 232 IDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+ + +R +A ++E+ +F+ + + K KYRS++FN+RD +N DL +V+ G++
Sbjct: 788 ANLTVGEEAVRGIAANIEAAIFDLMQCTDYRYKTKYRSLVFNLRDPRNKDLFLQVIRGDI 847
Query: 291 TPERLVTMSPEEMASDE 307
TP+ LV MS E+AS E
Sbjct: 848 TPQGLVRMSATELASQE 864
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++A+S+E+ M+E G +T K + R+I+FN++ KNP LR R+L+G + P+ L
Sbjct: 378 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 435
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 436 MSSQDMASEELQQKDAEIKREA 457
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 50/78 (64%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +F+ + +T K KYR+++FN+RD +NPDL +V+ G VTP LV MS +
Sbjct: 565 IAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSSVQ 624
Query: 303 MASDERQRQIENIKEKAL 320
+AS E R + ++K L
Sbjct: 625 LASQELARWRDQEEKKGL 642
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFHVTDNRYKS 722
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 723 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 765
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++A+S+E+ M+E G +T K + R+I+FN++ KNP LR R+L+G + P+ L
Sbjct: 357 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 414
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 415 MSSQDMASEELQQKDAEIKREA 436
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++A+S+E+ M+E G +T K + R+I+FN++ KNP LR R+L+G + P+ L
Sbjct: 350 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 407
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 408 MSSQDMASEELQQKDAEIKREA 429
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 188 PSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSV 247
P+ G + P + N R IR L L K S++D+ I+ E RVA+ +
Sbjct: 616 PAPGRLG-PSSPAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTESEVG---RVALRI 671
Query: 248 ESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
E +F + K KYRS+MFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 672 EKELFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 731
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++A+S+E+ M+E G +T K + R+I+FN++ KNP LR R+L+G + P+ L
Sbjct: 291 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 348
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 349 MSSQDMASEELQQKDAEIKREA 370
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 184 SVRKPSQGTIAT--PKLTQL-------IKCNDSSRDKIRELLANALSKVTSEADEEIIDE 234
S+RKP+ + T P +L + N R IR L L K +++D+ I+ E
Sbjct: 642 SIRKPAATSAPTTVPATGRLGGTGSAQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE 701
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++A+ +E MF + K KYRSIMFN++D KN L RVL E++ +
Sbjct: 702 NEVG---KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAK 758
Query: 295 LVTMSPEEMASDE 307
LV M PEE+ S E
Sbjct: 759 LVRMKPEELVSKE 771
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 722
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 723 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 765
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 507 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 563
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 564 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 606
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 507 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 563
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 564 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 606
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +F+ + K KYRS++FN+RD +NPDL +V+ G++TP LV MS +
Sbjct: 582 IAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDITPHGLVQMSSMQ 641
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 642 LAPQELARWRDQEEKRGL 659
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
SVES M+ G G++ K KYRS+MFNI+D KN L +++ +V P++LV M+PEE+A
Sbjct: 1484 SVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELA 1543
Query: 305 SDE 307
S E
Sbjct: 1544 SQE 1546
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
SVES M+ G G++ K KYRS+MFNI+D KN L +++ +V P++LV M+PEE+A
Sbjct: 1486 SVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELA 1545
Query: 305 SDE 307
S E
Sbjct: 1546 SQE 1548
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 213 RELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMF 271
R LL L++V D + V A D RV+ VE ++ KL TGA+ K KYR+++F
Sbjct: 1272 RTLLDVLLTRVKKAPD---VKNVTADDVKRVSKQVEFELY-KLFNDTGAKYKAKYRTLIF 1327
Query: 272 NIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
NI+D KN L + +L GE++P LV MS +++AS E
Sbjct: 1328 NIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQE 1363
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K S++D+ I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 766
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|303285732|ref|XP_003062156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456567|gb|EEH53868.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 243 VAVSVESVMFEKLGR--STGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
+ V +E +FE G S G + + RSI FN+ KN LR L G++ P + M+P
Sbjct: 104 LGVKIERALFEAHGEDASNGEYRARARSIAFNL--AKNESLRVGALAGDIAPATIARMTP 161
Query: 301 EEMASDERQRQIENIKEKALFECQRGGEATAT-TDQFKCSRCGQRKCTYYQM-------- 351
+E+A+++ + + ++E+ + R AT TD F C+ C +C Y ++
Sbjct: 162 DELATEDMRNARKKMEERLTRKRTRTNMDGATETDAFACAHCRSTRCQYLRVGQVRDLGK 221
Query: 352 ----QTRSADEPMTTYVTCVNCSKRW 373
+ A + V C+ C W
Sbjct: 222 SETWGNKDAADDAKVLVRCLECQAEW 247
>gi|116830493|gb|ABK28204.1| unknown [Arabidopsis thaliana]
Length = 249
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%)
Query: 6 VELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTK 65
+ELF+ AKK+AD A G+ + E S CVD L L FP++ + + ++ RL LTK
Sbjct: 155 LELFEIAKKSADFANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEHLTK 214
Query: 66 HPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTG 100
H KI AS LL W++ + E+ R + G
Sbjct: 215 HKNRKICNSASKLLQCWRESIREQQLRESRKTQGG 249
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 670 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 726
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 727 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 769
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 39 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 95
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 96 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 138
>gi|327268236|ref|XP_003218904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Anolis carolinensis]
Length = 350
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 19/177 (10%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K +LL AL+ +S ++EEI + A +E +F + K RS
Sbjct: 173 RGKCTQLLFEALTD-SSTSNEEIAKHH------QTAEEIEQHIFALHAGNDRKYKNSIRS 225
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N+++ KN L+ + +G ++P+ MS EMA DE ++ + + A+ E Q
Sbjct: 226 KVSNLKNPKNYHLKHSLHIGVLSPQTFAGMSAVEMAHDELKQLRASYTKSAVQEHQLPQR 285
Query: 329 ATAT-TDQFKCSRCGQRKCT---------YYQMQTRSAD--EPMTTYVTCVNCSKRW 373
+ T T++ KC RC + CT + RS D E M TYV C C ++W
Sbjct: 286 ISGTLTNKIKCRRCEKFNCTVTVIARGALFLPGWVRSTDPDEQMMTYVICNECGEQW 342
>gi|440295289|gb|ELP88202.1| transcription elongation factor S-II, putative [Entamoeba invadens
IP1]
Length = 169
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 251 MFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQR 310
+FE + + A R ++ N++ KN L+ + EVT + +V M+ E+A DE +
Sbjct: 45 LFEVHEKDSEAFNTHLRMLLSNLK--KNQKLKDSIEKDEVTVKEVVGMNSYELADDE-VK 101
Query: 311 QIENIKEKALFECQRGGEATATTDQ-FKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+++N K + ++ + + D F C +C RK Q+Q RSADEPMT +TC NC
Sbjct: 102 KLKNRVMKDEEDKKKPLDISKIPDHEFSCPKCSSRKIQETQVQLRSADEPMTRILTCANC 161
Query: 370 SKRWK 374
WK
Sbjct: 162 GFGWK 166
>gi|449017739|dbj|BAM81141.1| RNA polymerase III subunit [Cyanidioschyzon merolae strain 10D]
Length = 288
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 333 TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T Q +C RC RK ++YQ+QTRSADEPMTT+ C+ C +W+
Sbjct: 246 TSQVRCERCSARKASFYQLQTRSADEPMTTFYRCLECGAQWR 287
>gi|15225791|ref|NP_180868.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|2924782|gb|AAC04911.1| hypothetical protein [Arabidopsis thaliana]
gi|91805475|gb|ABE65466.1| unknown [Arabidopsis thaliana]
gi|330253690|gb|AEC08784.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 248
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%)
Query: 6 VELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTK 65
+ELF+ AKK+AD A G+ + E S CVD L L FP++ + + ++ RL LTK
Sbjct: 155 LELFEIAKKSADFANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEHLTK 214
Query: 66 HPREKIQIVASNLLDIWKKIVIEETTR 92
H KI AS LL W++ + E+ R
Sbjct: 215 HKNRKICNSASKLLQCWRESIREQQLR 241
>gi|339244687|ref|XP_003378269.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
gi|316972840|gb|EFV56486.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
Length = 2283
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVS-VESVMFEKLGRSTGAEKL--KY 266
D IR L N + + + D ++++ N I+ V +E ++E G K +
Sbjct: 135 DSIRSNLNNCRA-MFEDCDANLLNDNN----IKTIVQQIEESIYELNGSDETNSKYCSEI 189
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS N+ + KN L + +L G++ P M+ EEMA +E + + ++ +L E
Sbjct: 190 RSHAMNLCNSKNCQLLRDILTGKILPANFAKMTTEEMAPEEVKNMRKAVERDSLKEHMLS 249
Query: 327 GEATAT-TDQFKCSRCGQRKCTYYQMQTRSADEP-MTTYVTCVNCSKRWK 374
E + + F C +CGQR C Y + E TYV C C R K
Sbjct: 250 NEGSLLHSTTFHCRQCGQRDCNYTVSYEKDGHEAEAVTYVVCNQCGHRKK 299
>gi|315040700|ref|XP_003169727.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
gi|311345689|gb|EFR04892.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
Length = 849
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 31/210 (14%)
Query: 132 STAETVKVEKTGSVSRSET---VQVEKKETNGDSVMDRGEAVKVEKIIEEEKQ-APSVRK 187
S+A K E+ G + E +++K TN + + V+ ++ +Q A S R
Sbjct: 204 SSAHKRKHEEQGENTPQEPGSRQKLQKLSTNLPAPPQDARSSPVQSGVQSGRQSASSPRT 263
Query: 188 PSQGTI------ATPKLTQLIKCNDSSRDKIRELL--------ANALSKVTSEADEEIID 233
PSQG +T + LI S+ + +L+ A + S++ +E +
Sbjct: 264 PSQGPTLKSRSGSTAGIDHLIVARRSAATALSKLVIEIAGAAVAAGTFTIPSDSTKETVG 323
Query: 234 EVNACDPIRVAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGE 289
E R+ +E M+ L S+G A K + R+I+FN+R KNP LR +L+G
Sbjct: 324 E-------RLGAEIEDCMYRNLCGSSGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGR 374
Query: 290 VTPERLVTMSPEEMASDERQRQIENIKEKA 319
TP+ + TMS + MAS E + + E IK +A
Sbjct: 375 TTPDAISTMSTQNMASQELREKDEEIKREA 404
>gi|195391634|ref|XP_002054465.1| GJ24469 [Drosophila virilis]
gi|194152551|gb|EDW67985.1| GJ24469 [Drosophila virilis]
Length = 2055
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
Query: 247 VESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
VES M+ GR A+ K KYRS+MFNI+D KN L +++ +V P++LV M+P E+AS
Sbjct: 1349 VESEMYHSFGRDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1408
Query: 306 --------DERQRQIENIK--EKALFEC 323
+E + Q++ IK E L C
Sbjct: 1409 QELAKWREEENRHQLDMIKKSELDLLSC 1436
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 703 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 759
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 760 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 802
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 701 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 757
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 758 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 800
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 184 SVRKPSQGTI--ATPKLTQLIKCNDSS-------RDKIRELLANALSKVTSEADEEIIDE 234
+VRKP ++ A+P +L + +S R IR L L K +++D+ I+ E
Sbjct: 587 AVRKPGSTSVSLASPAPGRLGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE 646
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++A+ +E MF + K KYRS+MFN++D KN L RVL E++ +
Sbjct: 647 NEVG---KIALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAK 703
Query: 295 LVTMSPEEMASDE----RQRQIENIKE 317
LV M PEE+ S E R+R + + E
Sbjct: 704 LVRMKPEELVSKELSVWRERTTKPVME 730
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
+ IRE N L+++ E E+ +++ + ++A+ +E+ +FEK ++ E+L RS+
Sbjct: 183 ENIREKAKNVLNQILLENLEDTGVDIDKTNISKIAIDIENALFEKYFKADYLEQL--RSL 240
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
FN+R ++N DL++ +++ +++P RL M+ +E+AS
Sbjct: 241 TFNLRGKRNLDLKRAIVMSDISPTRLAEMTADELAS 276
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|154274572|ref|XP_001538137.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414577|gb|EDN09939.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 892
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 29/181 (16%)
Query: 152 QVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDK 211
Q+E E +V R ++V + + E+K S R P++GT L L + N
Sbjct: 237 QIESPEVKSPTVH-RKQSVSSVQSVREQK---SGRSPTEGTGGPSDLQSLARRN------ 286
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPI---------RVAVSVESVMFEKL----GRS 258
+ANAL K+ E + + P + V++E M++ L G
Sbjct: 287 ----VANALVKLFVEQAASALQQGAYSMPAGKTKEAVGEALGVAIEHSMYKHLCGGSGEP 342
Query: 259 TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEK 318
+ A K + R+I+FN+R KN LR +L+G ++P+ L TMS ++MAS E +++ + IK +
Sbjct: 343 SEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKRE 400
Query: 319 A 319
A
Sbjct: 401 A 401
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++ S+E M++ + G T KL+ R+I+FN++ KNP LR R+L+G + P+ L
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 383 MSSQDMASEELQQKDAEIKREA 404
>gi|261326497|emb|CBH09458.1| transcription elongation factor A protein 1,putative [Trypanosoma
brucei gambiense DAL972]
Length = 467
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 280 DLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI---KEKALFECQRGGEATATTDQF 336
++R+R+ +GE++ + + +S E+ + E + E K + L E +R TT F
Sbjct: 370 EIRRRLAMGELSGKDFLELSRWELMTQEEKEDAERRTTEKLRNLEETERS--LLHTTSLF 427
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+C C R+C + ++Q RSADEP T ++ C+ C W
Sbjct: 428 ECPECHGRECEWRELQIRSADEPTTKFIKCIKCKHNW 464
>gi|448929538|gb|AGE53105.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus Fr5L]
Length = 180
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALF--ECQR 325
S+ +N++ PDL ++ G+ + V P E+ SD+ E +AL +
Sbjct: 73 SVRYNLK--LRPDLMDKMKTGDCSIRWFVNAKPWEICSDKWTEAFEAAARRALRFSDASS 130
Query: 326 GGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
A C +C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 131 MDPADMPDGMLSCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 179
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVG---KIALHIEKEMFNLFQVTDNRFKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|194742650|ref|XP_001953814.1| GF17954 [Drosophila ananassae]
gi|190626851|gb|EDV42375.1| GF17954 [Drosophila ananassae]
Length = 1976
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+VES M+ GR GA+ K KYRS+MFNI+D KN L +++ +V P++LV M+ E++A
Sbjct: 1299 AVESEMYHSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTAEQLA 1358
Query: 305 S--------DERQRQIENIKEKAL 320
S +E + Q++ IK+ L
Sbjct: 1359 SQELAKWREEENRHQLDMIKKSEL 1382
>gi|115400495|ref|XP_001215836.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191502|gb|EAU33202.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++A+++E M++ + G T A KL+ R+I+FN++ KN LR R+L+G ++P+ L
Sbjct: 337 QIALAIEYAMYQNICGGAGEPTEAYKLQLRTILFNVK--KNTSLRDRLLVGSLSPDSLSK 394
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 395 MSSQDMASEELQQKDAEIKREA 416
>gi|84043614|ref|XP_951597.1| transcription elongation factor S-II [Trypanosoma brucei TREU927]
gi|33348490|gb|AAQ15815.1| transcription elongation factor S-II, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359168|gb|AAX79612.1| transcription elongation factor S-II, putative [Trypanosoma brucei]
Length = 467
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 280 DLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENI---KEKALFECQRGGEATATTDQF 336
++R+R+ +GE++ + + +S E+ + E + E K + L E +R TT F
Sbjct: 370 EIRRRLAMGELSGKDFLELSRWELMTQEEKEDAERRTTEKLRNLEETERS--LLHTTSLF 427
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+C C R+C + ++Q RSADEP T ++ C+ C W
Sbjct: 428 ECPECHGRECEWRELQIRSADEPTTKFIKCIKCKHNW 464
>gi|452821122|gb|EME28156.1| DNA-directed RNA polymerase III subunit C11 [Galdieria sulphuraria]
Length = 107
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 311 QIENIKEKALFECQRGGEA-----------TATTDQFKCSRCGQRKCTYYQMQTRSADEP 359
Q+E E+ +F Q+ EA TD C RC K ++QMQTRSADEP
Sbjct: 32 QVEGKMERKVFGLQKKQEADILGGDKQWELADQTDTL-CPRCSHGKAYFFQMQTRSADEP 90
Query: 360 MTTYVTCVNCSKRWK 374
M+T+ CV+C +WK
Sbjct: 91 MSTFYRCVHCGHQWK 105
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 194 ATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFE 253
A P +Q N R IR L L K +++D+ I+ E ++A+ +E +F
Sbjct: 907 ANPSQSQ---PNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKELFN 960
Query: 254 KLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
+ K KYRSIMFN++D KN L RVL E+ +LV M PEE+ S E
Sbjct: 961 LFHVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPEELLSKE 1014
>gi|311977721|ref|YP_003986841.1| transcription factor S-II-related protein [Acanthamoeba polyphaga
mimivirus]
gi|82000272|sp|Q5UQS8.1|TFS2_MIMIV RecName: Full=Transcription factor S-II-related protein
gi|55416958|gb|AAV50608.1| TFII-like transcription factor [Acanthamoeba polyphaga mimivirus]
gi|308204765|gb|ADO18566.1| transcription factor S-II-related protein [Acanthamoeba polyphaga
mimivirus]
gi|351737490|gb|AEQ60525.1| TFII-like transcription factor [Acanthamoeba castellanii mamavirus]
Length = 173
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 267 RSIMFNIRDEKNP---DLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
++IMFN++DE N ++K + + L ++PEE+ D I+ I K + E
Sbjct: 65 KNIMFNLKDENNHTIKKIKKLIDKNKYNAYNLAFLNPEELNKD---NWIKIIARKQMTE- 120
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
AT + C C +YQ+QTRSADEPMTT+ C NC K +K
Sbjct: 121 -ETLNQMATVEWKPCYACKNTSYHFYQLQTRSADEPMTTFYICKNCMKTYK 170
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 184 SVRKPSQGTI--ATPKLTQLIKCNDSS-------RDKIRELLANALSKVTSEADEEIIDE 234
+VRKP ++ A+P +L + +S R IR L L K +++D+ I+ E
Sbjct: 639 AVRKPGSTSVPLASPAPGRLGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE 698
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++A+ +E MF + K KYRS+MFN++D KN L RVL E++ +
Sbjct: 699 NEVG---KIALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAK 755
Query: 295 LVTMSPEEMASDE 307
LV M PEE+ S E
Sbjct: 756 LVRMKPEELVSKE 768
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 184 SVRKPSQGTI--ATPKLTQLIKCNDSS-------RDKIRELLANALSKVTSEADEEIIDE 234
+VRKP ++ A+P +L + +S R IR L L K +++D+ I+ E
Sbjct: 639 AVRKPGSTSVPLASPAPGRLGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE 698
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++A+ +E MF + K KYRS+MFN++D KN L RVL E++ +
Sbjct: 699 NEVG---KIALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAK 755
Query: 295 LVTMSPEEMASDE 307
LV M PEE+ S E
Sbjct: 756 LVRMKPEELVSKE 768
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 184 SVRKPSQGTI--ATPKLTQLIKCNDSS-------RDKIRELLANALSKVTSEADEEIIDE 234
+VRKP ++ A+P +L + +S R IR L L K +++D+ I+ E
Sbjct: 639 AVRKPGSTSVPLASPAPGRLGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE 698
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
++A+ +E MF + K KYRS+MFN++D KN L RVL E++ +
Sbjct: 699 NEVG---KIALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAK 755
Query: 295 LVTMSPEEMASDE 307
LV M PEE+ S E
Sbjct: 756 LVRMKPEELVSKE 768
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 241 IRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
+ A ++E +F + K KYRSI+FN++D N L +R++LGE+TP+ L ++S
Sbjct: 259 LNAAKNIEQEIFALFYHTDARYKKKYRSILFNLKDPNNKVLFRRLVLGEITPQHLASLSS 318
Query: 301 EEMASDE 307
EMA DE
Sbjct: 319 TEMAGDE 325
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ ++ E +VA+ +E MF + K
Sbjct: 663 NSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVG---KVALHIEKEMFNLFQVTDNRYKS 719
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 720 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 762
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSIM 270
+R + A+ +V +E+ D V + + +A +E+ +F+ + G + KYRS++
Sbjct: 593 VRSTVVRAMREVLWSRLQELPDLVLSEGAVEGLAAGIEAALFDLTHATNGHYRTKYRSLL 652
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
FN+RD +NPDL +V+ G+VTP+ LV M+ ++A E R + +++ L
Sbjct: 653 FNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQLAPQELARWRDQEEKRGL 702
>gi|326634546|pdb|3QT1|I Chain I, Rna Polymerase Ii Variant Containing A Chimeric Rpb9-C11
Subunit
Length = 133
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%)
Query: 308 RQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCV 367
R I NI E A G + T +C +C R+ ++Q+Q RSADEPMTT+ CV
Sbjct: 65 RHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQLQIRSADEPMTTFYKCV 124
Query: 368 NCSKRWK 374
NC RWK
Sbjct: 125 NCGHRWK 131
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMF 271
+RE + A + S+ E+I +++ +++ +E +F + K KYRS+ F
Sbjct: 503 VRENIYKAFRDILSKVAEKIAIQMSVVS--KLSKDIEEQLFNLFNDTGSRYKNKYRSLSF 560
Query: 272 NIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
N++DEKN L +R+L G+++P +LV M+ EE+A+ E
Sbjct: 561 NLKDEKNKALVERILHGDISPSKLVRMTSEELANKE 596
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 243 VAVSVESVMFEKLG---RSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+A+++E +++ G G+ + K+R++ FN+RD KN LR RV+ G+VTP+ LV M
Sbjct: 237 LALTIEQELYDAYGTVEPEIGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAM 296
Query: 299 SPEEMASDERQRQIENIKEKAL 320
S EEM + E Q+ E ++ +A+
Sbjct: 297 SSEEMMNPELQKLAEEVRAEAI 318
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 247 VESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD 306
+E +F +G + K + RS + N++D KNPDLR+ VL G +TP+++ M+ EEMASD
Sbjct: 3 IEECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 62
Query: 307 E 307
E
Sbjct: 63 E 63
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 207 SSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKY 266
S R K LL AL+ S +D+ +D+ ++A +E ++ ++ K
Sbjct: 180 SVRHKAVGLLHGALTD--SSSDQSKVDQGQ-----KLAREIEEHIYALYSKTIKKYKNCI 232
Query: 267 RSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRG 326
RS + N+R+ KN L++ + G +TPE M+ +MASDE +R + E + E
Sbjct: 233 RSKVSNLRNPKNVHLQQNLFSGSLTPEAFAEMTVMDMASDELKRLRASYTETCVQEHHLP 292
Query: 327 GEATAT-TDQFKCSRCGQRKC---------TYYQMQTRSA--DEPMTTYVTCVNCSKRW 373
T T++ KC RC + C + R A DE M TYV C C ++W
Sbjct: 293 QVPEGTQTNKVKCRRCEKSDCKVTMISRGTLFLPSWVRRANPDEQMMTYVICNECGEQW 351
>gi|409074516|gb|EKM74912.1| hypothetical protein AGABI1DRAFT_65164 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426193616|gb|EKV43549.1| hypothetical protein AGABI2DRAFT_227329 [Agaricus bisporus var.
bisporus H97]
Length = 106
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 300 PEEMASDERQRQIENIKEKALFECQRGGEATATTDQFK--CSRCGQRKCTYYQMQTRSAD 357
P E ++ +K K + + G EA A DQ + C +C + +YQ+Q RSAD
Sbjct: 28 PYEFPITKQMTTRTRLKRKEVDDVLGGDEAWAHADQTQASCDKCNHDRAYFYQLQIRSAD 87
Query: 358 EPMTTYVTCVNCSKRWK 374
EPMTT+ C NC+ +W+
Sbjct: 88 EPMTTFYRCTNCTHQWR 104
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 21/154 (13%)
Query: 177 EEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANAL--SKVTSEADEEIIDE 234
+E K +PS K ++ T T+ I+ N R + ELL++ + +K DEEI D
Sbjct: 1238 QESKSSPSQLKQTKLTPVKKPETEPIRVN--IRKSLTELLSSRIKETKDLKLTDEEIAD- 1294
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
+A ++E M++ + K KYRS++FNI+D KN L +++ +TP+
Sbjct: 1295 --------LAFNIEFEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADHSLTPDA 1346
Query: 295 LVTMSPEEMASD--------ERQRQIENIKEKAL 320
+V +SP+EMAS E + Q+E IK+ L
Sbjct: 1347 VVRLSPDEMASQELAEWREKETKHQLEMIKKNEL 1380
>gi|145349019|ref|XP_001418938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579168|gb|ABO97231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 528
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R +RE + A+ E DE N P VA +VES +++K G + + + RS
Sbjct: 12 RSTVREFILKAMEMAAEETKASGHDEANGT-PSEVAAAVESALYKKCGSADKEYRTRARS 70
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
+ N++D +NP LR RVL ++ +LV MSP ++A+ E
Sbjct: 71 LKSNLQDVRNPQLRARVLANDLKASQLVDMSPLQLANKE 109
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 703 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 759
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 760 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 802
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSIM 270
+R + A+ +V +E+ D V + + + +A +E+ +F+ + K KYRS++
Sbjct: 534 VRGTVVRAMQEVLWSRLQELPDLVLSEEAVEGIAAGIEAALFDLTQATNCRYKTKYRSLL 593
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMS-----PEEMA---SDERQRQIENIKEKALFE 322
FN+RD +NPDL +V+ G+VTP+ LV MS P+ +A E +R +E I+++
Sbjct: 594 FNLRDPRNPDLFLKVVHGDVTPQGLVQMSSIQLAPQRLAHWRDQEEKRGLEIIEQQQKEP 653
Query: 323 CQ 324
CQ
Sbjct: 654 CQ 655
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 763
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 722
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 723 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 765
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 676 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 732
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 733 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 775
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 243 VAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
+A +E +F KL R + K K RS++FN++D+ NP+LR+RVL G++ PERL +M+ E
Sbjct: 339 LAFRIEEELF-KLFRGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAE 397
Query: 302 EMASDE 307
E+AS E
Sbjct: 398 ELASKE 403
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|297826755|ref|XP_002881260.1| hypothetical protein ARALYDRAFT_902374 [Arabidopsis lyrata subsp.
lyrata]
gi|297327099|gb|EFH57519.1| hypothetical protein ARALYDRAFT_902374 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E +ELF+ AKK+AD A G+ + E S CVD L L FP++ + + ++ RL L
Sbjct: 155 ETLELFEIAKKSADVANTKGLLAAEVETSICVDTLSLLMEFPISATAIETRRIMVRLENL 214
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEETTR 92
TKH KI A+ LL W+ + ++ R
Sbjct: 215 TKHKNRKICNSAAALLQCWRHSIRDQELR 243
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D I+ E ++A+ +E MF + K
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVG---KIALHIEKEMFNLFQVTDNRFKS 720
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV M PEE+ S E
Sbjct: 721 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKE 763
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ I+ E ++A+ +E MF + K
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQVTDNRYKS 723
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 766
>gi|326475222|gb|EGD99231.1| PHD finger domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 833
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
R+ +E M+ L STG A K + R+I+FN+R KNP LR +L+G TP+ + T
Sbjct: 309 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS + MAS E + + E IK +A
Sbjct: 367 MSTQNMASQELREKDEEIKREA 388
>gi|326479708|gb|EGE03718.1| PHD finger domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 833
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
R+ +E M+ L STG A K + R+I+FN+R KNP LR +L+G TP+ + T
Sbjct: 309 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS + MAS E + + E IK +A
Sbjct: 367 MSTQNMASQELREKDEEIKREA 388
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 189 SQGTIATPKLTQLIK---CNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
SQ T +TP+ Q N R IR L L K ++D+ ++ E R+A
Sbjct: 680 SQPTSSTPQSAQSSSHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVA---RIAT 736
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
++E MF L R T + K KYR+IMFN++D KN L RVL E+ +LV + PEE+A
Sbjct: 737 NIEREMF-NLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELA 795
Query: 305 SDERQRQIENIKE 317
S R++ + KE
Sbjct: 796 S----RKLSSWKE 804
>gi|327302438|ref|XP_003235911.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
gi|326461253|gb|EGD86706.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
Length = 832
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
R+ +E M+ L STG A K + R+I+FN+R KNP LR +L+G TP+ + T
Sbjct: 310 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 367
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS + MAS E + + E IK +A
Sbjct: 368 MSTQNMASQELREKDEEIKREA 389
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 15/87 (17%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R +++EL ALS EE++ + A VE+ +F+ + G K KYRS
Sbjct: 114 RSRLQELPELALS-------EEVVGGI--------AAGVEAALFDLTQGTQGRYKAKYRS 158
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERL 295
++FN+RD +NPDL +VL G+VTP L
Sbjct: 159 LLFNLRDPRNPDLFLKVLHGDVTPHDL 185
>gi|297823073|ref|XP_002879419.1| hypothetical protein ARALYDRAFT_902347 [Arabidopsis lyrata subsp.
lyrata]
gi|297325258|gb|EFH55678.1| hypothetical protein ARALYDRAFT_902347 [Arabidopsis lyrata subsp.
lyrata]
Length = 336
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E++ELFD AKK+AD A G+ + E S CVD L L FP+ + Q+ +L L
Sbjct: 249 EMLELFDMAKKSADVANAKGILAAKEEASICVDTLSLLMEFPIISTATETRQIMVKLERL 308
Query: 64 TKHPREKIQIVASNLLDIWKKIV 86
TKH KI A LL W++ +
Sbjct: 309 TKHKDRKICNSALALLHHWRQNI 331
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 189 SQGTIATPKLTQLIK---CNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
SQ T +TP+ Q N R IR L L K ++D+ ++ E R+A
Sbjct: 608 SQPTSSTPQSAQSSSHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVA---RIAT 664
Query: 246 SVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
++E MF L R T + K KYR+IMFN++D KN L RVL E+ +LV + PEE+A
Sbjct: 665 NIEREMF-NLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELA 723
Query: 305 SDERQRQIENIKE 317
S R++ + KE
Sbjct: 724 S----RKLSSWKE 732
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 27/157 (17%)
Query: 180 KQAPSVRKPSQGTIATPKLTQLIKC-NDSSRDKIRELLANALSKVTSEA------DEEII 232
KQ P+ PSQ T KLT + + + R IR+ L LS E DEEI
Sbjct: 1287 KQEPAKSLPSQSKQQT-KLTPVKRPETEPIRLNIRKSLTELLSSRIKETEDLKLTDEEIA 1345
Query: 233 DEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVT 291
D +A ++E M+ K + TGA+ K KYRS++FNI+D KN L +++ +T
Sbjct: 1346 D---------LAFNIELEMY-KYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIADRSLT 1395
Query: 292 PERLVTMSPEEMASD--------ERQRQIENIKEKAL 320
P+ +V +SP+EMAS E + Q+E IK+ L
Sbjct: 1396 PDAVVRLSPDEMASQELAEWREKETKHQLEMIKKNEL 1432
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 10/132 (7%)
Query: 189 SQGTIATPKLTQLIK---CNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAV 245
SQ T +TP+ Q N R IR L L K ++D+ ++ E R+A
Sbjct: 595 SQPTSSTPQSAQSSSHPVPNMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVA---RIAT 651
Query: 246 SVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
++E MF + K KYR+IMFN++D KN L RVL E+ +LV + PEE+AS
Sbjct: 652 NIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELAS 711
Query: 306 DERQRQIENIKE 317
R++ + KE
Sbjct: 712 ----RKLSSWKE 719
>gi|392575324|gb|EIW68458.1| hypothetical protein TREMEDRAFT_24045, partial [Tremella
mesenterica DSM 1558]
Length = 108
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 314 NIKEKALFECQRGGEATATTDQF--KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSK 371
++K K + + G EA A D+ C +C RK Y Q+Q RSADEPMTT+ CV+CS
Sbjct: 45 HLKRKQVDDVLGGKEAWANVDKIDATCPKCDARKAYYRQLQIRSADEPMTTFYKCVDCSY 104
Query: 372 RWK 374
+W+
Sbjct: 105 QWR 107
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L L K +++D+ ++ E +VA+ +E MF + K
Sbjct: 663 NSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVG---KVALHIEKEMFNLFQVTDNRYKS 719
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYRSIMFN++D KN L RVL E++ +LV + PEE+ S E
Sbjct: 720 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKE 762
>gi|448934363|gb|AGE57916.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NW665.2]
Length = 181
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG--EATATTDQF 336
PDL ++ G+ + V P E+ S++ E +AL A
Sbjct: 83 PDLMDKMKTGDCSIRWFVNAKPWEICSEKWTTAFEAAARRALRFADASSIDPADMADGML 142
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+C +C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 143 QCGKCKSRKTSYYEMQTRSADEPMTVFAKCHTCGSRWK 180
>gi|343474640|emb|CCD13763.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 183
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 331 ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
A T FKC CG+ +C++Y+ Q RSADEP T ++ C+ C+ W
Sbjct: 138 AVTSLFKCPACGENRCSFYEQQIRSADEPTTKFLRCLECNNAW 180
>gi|255932231|ref|XP_002557672.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582291|emb|CAP80469.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 877
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%), Gaps = 32/204 (15%)
Query: 135 ETVKVEKTG-SVSRSETVQVEKKETNGDSVMDRGEAVKVEKIIEE-------EKQAPSVR 186
ETV+ E S+S + +Q N + + +G VK +++ + E AP ++
Sbjct: 261 ETVEAENVNTSISLTHHIQ------NANMFICQGPQVKQQRVTPQSTPAAVPEATAPQIK 314
Query: 187 -KPSQGTIATPKLTQLIKCNDSSRDKIRELLANALS------KVTSEADEEIIDEVNACD 239
P A L +L+ S + +L + ++ T A++ + D
Sbjct: 315 TDPIPEAPAIAALEELMPARKSVATHLVKLFVDQITAALKAGSFTLPANQSMEDMAQ--- 371
Query: 240 PIRVAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
++A+S+E M+E + TG A K + RSIMFN++ KN LR R+L+G ++P+ L
Sbjct: 372 --QLALSIEDAMYESICGRTGEPNEAYKAQLRSIMFNVK--KNASLRDRLLIGSLSPKLL 427
Query: 296 VTMSPEEMASDERQRQIENIKEKA 319
M+ EMAS E Q++ IK +A
Sbjct: 428 SQMTTAEMASKELQQKDAEIKREA 451
>gi|348541331|ref|XP_003458140.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oreochromis niloticus]
Length = 323
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 206 DSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLK 265
D+ R K +LL AL + D+ +A +E + E + K
Sbjct: 146 DNVRTKCVQLLLAALCPSAPDQDKAA----------ELARDIERHVHELHNHNQVKYKAC 195
Query: 266 YRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQ- 324
RS + N+R+ K+ L + +L G ++PE MS E+MAS E ++ E + + E Q
Sbjct: 196 VRSKVANLRNPKSGHLHQGLLSGSLSPEAFARMSAEDMASAELRQLREEYSSQGVSERQL 255
Query: 325 -RGGEATATTDQFKCSRCGQRKCTYYQ-----------MQTRSADEPMTTYVTCVNCSKR 372
+G E T T++ +C RCG C Q ++ DE T+VTC C ++
Sbjct: 256 PQGIEGT-RTEKIRCKRCGGSDCRVTQVSRGVLFLPAWVRQGGPDEDAMTFVTCSGCGQQ 314
Query: 373 W 373
W
Sbjct: 315 W 315
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 24/149 (16%)
Query: 187 KPSQGTIATPKLTQLIKC-NDSSRDKIRELLANALSKVTSEA------DEEIIDEVNACD 239
KPS + KLT + K + R IR+ L LS E DEEI D
Sbjct: 115 KPSPSQLKQTKLTPVKKPETEPIRVNIRKTLTELLSSRIKETEDLKLTDEEIAD------ 168
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
+A ++E M++ + K KYRS++FNI+D KN L +++ +TP+ +V +S
Sbjct: 169 ---LAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLS 225
Query: 300 PEEMASD--------ERQRQIENIKEKAL 320
P+EMAS E + Q+E IK+ L
Sbjct: 226 PDEMASQELAEWREKETKHQLEMIKKNEL 254
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 19/124 (15%)
Query: 184 SVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRV 243
S +KPS G I R +R+ L L K + E+D +I ++ P V
Sbjct: 793 SSKKPSTGHI---------------RRSVRDSLEEILLKRSKESDLKI----SSDRPAEV 833
Query: 244 AVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEM 303
A E +F K KYRS+ FN++D KN L KRVL GEV+P LV M+ EE+
Sbjct: 834 ARRTEKELFALFQGVDSKYKNKYRSLTFNLKDAKNNVLFKRVLKGEVSPADLVRMTAEEL 893
Query: 304 ASDE 307
AS E
Sbjct: 894 ASKE 897
>gi|169618205|ref|XP_001802516.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
gi|111058985|gb|EAT80105.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
Length = 896
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 23/152 (15%)
Query: 177 EEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEA------DEE 230
++K AP PS G I + TQ +K+R++L+ L K S+A D E
Sbjct: 289 HQDKSAPPT--PSVGDIDSLPATQ-----KPFAEKLRDVLS-PLIKTASDARGYRIPDGE 340
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAEK---LKYRSIMFNIRDEKNPDLRKRVLL 287
+ A R+A + + E G T + ++ R+IMFN + KNP L R+L
Sbjct: 341 TATSLGA----RLAFQLNTAAVEHYGEPTAGDSPSSIRLRAIMFNAK--KNPILVDRLLS 394
Query: 288 GEVTPERLVTMSPEEMASDERQRQIENIKEKA 319
G + P+ LV+M EEMAS+++Q++ I+E A
Sbjct: 395 GSLKPQELVSMPTEEMASEDKQKEFAAIREAA 426
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%), Gaps = 6/84 (7%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
DP +A +E +F KL R + K K RS++FN++D+ NP+LR+ V+ G+++PERL
Sbjct: 353 DPELLASKIELELF-KLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCN 411
Query: 298 MSPEEMASDE----RQRQIENIKE 317
M+ EE+AS E RQ + E + E
Sbjct: 412 MTAEELASKELSQWRQAKAEEMAE 435
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 9/123 (7%)
Query: 211 KIRELLANALSKVTSEADEEIIDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSI 269
KIR +A A+ +V +E+ D V + + VA S+E+ +F+ + K KYRS+
Sbjct: 676 KIRGTVARAMQEVLWSRLQELPDLVLHEEVVESVAASIEAALFDLTQGTNCRYKTKYRSL 735
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMS-----PEEMA---SDERQRQIENIKEKALF 321
+FN+RD +N DL +V+ G+V+P LV MS P+E+A E +R +E I+++
Sbjct: 736 LFNLRDPRNMDLFLKVVHGDVSPHDLVRMSSIQLAPQELARWRDQEEKRGLEIIEQQQKE 795
Query: 322 ECQ 324
C+
Sbjct: 796 PCR 798
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 240 PIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS 299
P +A +E+ +F+ K K RS++FN++D NP+LR+RV+ G++ PE+L +M+
Sbjct: 414 PELLASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMT 473
Query: 300 PEEMASDE 307
EE+AS E
Sbjct: 474 AEELASKE 481
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 38 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 97
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 98 LAPQELARWRDQEEKRGL 115
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 11/88 (12%)
Query: 247 VESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
VES M+ G+ A+ K KYRS+MFNI+D KN L +++ +V P++LV M+P E+AS
Sbjct: 1366 VESEMYNSFGQDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1425
Query: 306 --------DERQRQIENIK--EKALFEC 323
+E + Q++ IK E L C
Sbjct: 1426 QELAKWREEENRHQLDMIKKSELDLLSC 1453
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +F + G K KYRS++FN+RD +NP+L +V+ G++TP LV MS +
Sbjct: 581 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 640
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 641 LAPQELARWRDQEEKRGL 658
>gi|325096028|gb|EGC49338.1| PHD finger domain-containing protein [Ajellomyces capsulatus H88]
Length = 896
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 25/149 (16%)
Query: 184 SVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPI-- 241
S R P++GT L L + N +ANAL K+ E + + P
Sbjct: 265 SGRSPTEGTGGPSDLQSLARRN----------VANALVKLFVEQAASALQQGAYSMPAGK 314
Query: 242 -------RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+ V++E M++ L G + A K + R+I+FN+R KN LR +L+G +
Sbjct: 315 TKEAVGEALGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSI 372
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKA 319
+P+ L TMS ++MAS E +++ + IK +A
Sbjct: 373 SPDTLATMSTQDMASKELRQKDDEIKREA 401
>gi|240277967|gb|EER41474.1| PHD finger domain-containing protein [Ajellomyces capsulatus H143]
Length = 851
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 25/149 (16%)
Query: 184 SVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPI-- 241
S R P++GT L L + N +ANAL K+ E + + P
Sbjct: 265 SGRSPTEGTGGPSDLQSLARRN----------VANALVKLFVEQAASALQQGAYSMPAGK 314
Query: 242 -------RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEV 290
+ V++E M++ L G + A K + R+I+FN+R KN LR +L+G +
Sbjct: 315 TKEAVGEALGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSI 372
Query: 291 TPERLVTMSPEEMASDERQRQIENIKEKA 319
+P+ L TMS ++MAS E +++ + IK +A
Sbjct: 373 SPDTLATMSTQDMASKELRQKDDEIKREA 401
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 243 VAVSVESVMFEKLGRSTG-----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
+A +E ++ + ST + K R+I+FN+ D KNPDLR R+ GE+ PERL
Sbjct: 3 LACRIEQSIYNQFPFSTKFNLKESYNAKLRNILFNLSDPKNPDLRNRIFSGELEPERLPI 62
Query: 298 MSPEEMASDERQR 310
M+ +EMAS E ++
Sbjct: 63 MTNDEMASSEMRK 75
>gi|297852816|ref|XP_002894289.1| hypothetical protein ARALYDRAFT_474220 [Arabidopsis lyrata subsp.
lyrata]
gi|297340131|gb|EFH70548.1| hypothetical protein ARALYDRAFT_474220 [Arabidopsis lyrata subsp.
lyrata]
Length = 283
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E+V+ F AA KA D A GV SG EVSRC+DAL L +T ++ +L
Sbjct: 165 EMVKQFVAANKAVDVANTKGVLSGKREVSRCIDALLLLMKINITPKPKEPRRMMDKLEGF 224
Query: 64 TKHPREKIQIVASNLLDIWKKIVIEE 89
TKH KI VAS LL W++ + E+
Sbjct: 225 TKHKDRKICHVASALLHFWRQRIREQ 250
>gi|448926167|gb|AGE49744.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus Can18-4]
Length = 180
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG--EATATTDQF 336
PDL ++ G+ + V P E+ S++ E +AL A
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSEKWTTAFEAAARRALRFADASSIDPADMADGML 141
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+C +C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 142 QCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 179
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 58.2 bits (139), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +F + G K KYRS++FN+RD +NP+L +V+ G++TP LV MS +
Sbjct: 659 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 718
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 719 LAPQELARWRDQEEKRGL 736
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
K RS++FN++D+ NPDLR RV +GEV+PE+L +M+ E++AS E
Sbjct: 5 KARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLASKE 47
>gi|155121849|gb|ABT13717.1| hypothetical protein MT325_M163L [Paramecium bursaria chlorella
virus MT325]
Length = 180
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGG--EATATTDQF 336
PDL ++ G+ + V P E+ S++ + +AL A
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSEKWTTAFDAAARRALRFADASSMDPADMADGML 141
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
+C +C RK +YY+MQTRSADEPMT + C C RWK
Sbjct: 142 QCGKCKSRKTSYYEMQTRSADEPMTVFAKCHVCGSRWK 179
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 15/106 (14%)
Query: 206 DSSRDKIRELLANAL----SKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
DS R K RE+LA AL + ADEE + +E +++++ +
Sbjct: 14 DSVRLKCREMLAAALRTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMK 62
Query: 262 EKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
K + RS + N++D KNP+LRK VL G + P+ M+ EEMASDE
Sbjct: 63 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 108
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 22 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 81
Query: 303 MASDE--RQRQIENIKEKALF-ECQRGGEATATTD 334
+A E R R E + +F +C A+ D
Sbjct: 82 LAPQELARWRDQEEKRGPQMFMDCSPQALPIASED 116
>gi|302654552|ref|XP_003019080.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291182777|gb|EFE38435.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 833
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
R+ +E M+ L S G A K + R+I+FN+R KNP LR +L+G TP+ + T
Sbjct: 309 RLGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS + MAS E + + E IK +A
Sbjct: 367 MSTQNMASQELREKDEEIKREA 388
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 242 RVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
++A +E+ +F KL S K RS++FN++D+ NP+LR RV GE+ PE L MS E
Sbjct: 359 KLATDIEAELF-KLYGSKKMYNQKARSLLFNLKDKSNPELRARVFSGEIPPEDLCRMSGE 417
Query: 302 EMASDERQRQIENIKEKAL 320
++AS E N KE+AL
Sbjct: 418 QLASKELS-DWRNAKEQAL 435
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A+ +E +F+ G + K K RS++FN++D+ NP LR +VL GE+TP+ L +M+ EE
Sbjct: 338 LALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTTEE 397
Query: 303 MASDE 307
+AS E
Sbjct: 398 LASKE 402
>gi|302510146|ref|XP_003017033.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291180603|gb|EFE36388.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 833
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
R+ +E M+ L S G A K + R+I+FN+R KNP LR +L+G TP+ + T
Sbjct: 309 RLGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS + MAS E + + E IK +A
Sbjct: 367 MSTQNMASQELREKDEEIKREA 388
>gi|255072159|ref|XP_002499754.1| predicted protein [Micromonas sp. RCC299]
gi|226515016|gb|ACO61012.1| predicted protein [Micromonas sp. RCC299]
Length = 181
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 23/149 (15%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRS----IMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+A +VE +F + G + A+ YRS + NIR +N LR+RVL GE++PE L +
Sbjct: 33 LARAVEQALFVRKG--SDAKDPSYRSAARFLAANIR--RNGPLRRRVLDGELSPEALCEL 88
Query: 299 SPEEMASDERQRQIENIKEKAL-FECQRGGEATATTDQFKCSRCGQRKCTYYQMQ----- 352
SP+E+A+DE +R+ E ++E++ + + T ++ C C +C Y ++
Sbjct: 89 SPDELATDEMKRKREKMEERSYKRRTRTTTDTLTDTTKYHCKDCDSNECAYADLKGHRDI 148
Query: 353 --------TRSADEPMTTYVTCVNCSKRW 373
SAD+ V C C W
Sbjct: 149 RKNETWGSNESADDARVM-VVCKQCGAEW 176
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E +++ G + + RS++FN++D+ NPDLR+RV+ E++ ERL +M
Sbjct: 200 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPDLRERVMSEEISAERLCSM 259
Query: 299 SPEEMASDE 307
+ EE+AS E
Sbjct: 260 TAEELASKE 268
>gi|119627992|gb|EAX07587.1| SPOC domain containing 1, isoform CRA_b [Homo sapiens]
Length = 644
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 68 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 127
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 128 LAPQELARWRDQEEKRGL 145
>gi|296813901|ref|XP_002847288.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842544|gb|EEQ32206.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 867
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 247 VESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+E+ M++ L S+G A K + R+I+FN+R KNP LR +L+G TP+ + TMS +
Sbjct: 344 IENCMYKNLCGSSGEPNDAYKTQLRTILFNVR--KNPSLRDSLLVGRTTPDSISTMSTQN 401
Query: 303 MASDERQRQIENIKEKA 319
MAS E + + E IK +A
Sbjct: 402 MASQELREKDEEIKREA 418
>gi|119627993|gb|EAX07588.1| SPOC domain containing 1, isoform CRA_c [Homo sapiens]
Length = 626
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 63 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 122
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 123 LAPQELARWRDQEEKRGL 140
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 133 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 192
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 193 LAPQELARWRDQEEKRGL 210
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 243 VAVSVESVMFEKLG---RSTG-AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+A S+ES MF +LG R+ G K K+RS++ N++D+ N + R++ G+++P L+ M
Sbjct: 126 LAKSIESTMFSQLGDRGRTCGEVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELIKM 185
Query: 299 SPEEMASDERQRQIENIKEKAL 320
S E+MA+ E + + E +++K+L
Sbjct: 186 SSEDMANPELKSKAEVLRQKSL 207
>gi|294880257|ref|XP_002768947.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
gi|239871976|gb|EER01665.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 243 VAVSVESVMFEKLGRS--TGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSP 300
+A ++E +++K RS + A + YR + FN+ D +N LR+RVL GE++P+ LVT S
Sbjct: 349 LASNIEGALYDKHERSIKSKAYRAAYRMVNFNLSDPQNASLRRRVLTGEMSPQHLVTASH 408
Query: 301 EEMASDE----RQRQIEN-IKEKALFE 322
+E+ SD R RQ E K + L E
Sbjct: 409 DELGSDSLKKRRLRQQEKYYKSQVLLE 435
>gi|150865882|ref|XP_001385273.2| RNA polymerase III C11 subunit [Scheffersomyces stipitis CBS 6054]
gi|149387138|gb|ABN67244.2| RNA polymerase III C11 subunit [Scheffersomyces stipitis CBS 6054]
Length = 111
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 332 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T+ Q CG K ++Q+Q RSADEPMTT+ CVNC +WK
Sbjct: 67 TSAQCPVDSCGGNKAYFFQLQIRSADEPMTTFYKCVNCGHKWK 109
>gi|357618039|gb|EHJ71135.1| hypothetical protein KGM_08149 [Danaus plexippus]
Length = 1879
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 166 RGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTS 225
R + K + ++E + PSV + TP + D R+ +R+ L ++ +
Sbjct: 958 RATSSKTQPVVE---KTPSVSPSTSRRKDTPDRRSRMSSEDPIRENVRKALQEQIASRMA 1014
Query: 226 EAD-----EEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNP 279
E D EE I + A E + E R G + K KYRS+MFNI+D KN
Sbjct: 1015 EYDGPKFTEEEIQQF--------AYDTELELHELFNRDVGMKYKAKYRSLMFNIKDRKNL 1066
Query: 280 DLRKRVLLGEVTPERLVTMSPEEMASDE 307
L +++ +TP++LV SPEE+AS E
Sbjct: 1067 SLWEKICEKVITPKQLVRFSPEELASQE 1094
>gi|403352044|gb|EJY75527.1| DNA-directed RNA polymerase subunit [Oxytricha trifallax]
Length = 106
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 307 ERQRQIENIKEKALFECQRGGEATATTDQFK--CSRCGQRKCTYYQMQTRSADEPMTTYV 364
E++ Q+E K + + G EA DQ + C +CG R+ + Q+Q RSADEPMTT+
Sbjct: 38 EKKMQLE---RKEVDDVLGGKEAWENVDQIEAECHKCGNRRAYFMQIQIRSADEPMTTFY 94
Query: 365 TCVNCSKRWK 374
C CS +W+
Sbjct: 95 KCTKCSYQWR 104
>gi|255725610|ref|XP_002547734.1| DNA-directed RNA polymerases III 12.5 kDa polypeptide [Candida
tropicalis MYA-3404]
gi|240135625|gb|EER35179.1| DNA-directed RNA polymerases III 12.5 kDa polypeptide [Candida
tropicalis MYA-3404]
Length = 111
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T T Q CG K ++Q+Q RSADEPMTT+ CV C RWK
Sbjct: 56 GGEGTWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 109
>gi|367006795|ref|XP_003688128.1| hypothetical protein TPHA_0M01190 [Tetrapisispora phaffii CBS 4417]
gi|357526435|emb|CCE65694.1| hypothetical protein TPHA_0M01190 [Tetrapisispora phaffii CBS 4417]
Length = 110
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 313 ENIKEKALFECQRGGEATATTDQFKC---SRCGQRKCTYYQMQTRSADEPMTTYVTCVNC 369
+ ++ K + + GG + +C +CG ++Q+Q RSADEPMTT+ CVNC
Sbjct: 44 KKLERKEIDDVLGGGWDNVDQTKVQCPNYDKCGGESAYFFQLQIRSADEPMTTFYKCVNC 103
Query: 370 SKRWK 374
KRWK
Sbjct: 104 GKRWK 108
>gi|425778300|gb|EKV16434.1| hypothetical protein PDIP_35810 [Penicillium digitatum Pd1]
gi|425780677|gb|EKV18681.1| hypothetical protein PDIG_07750 [Penicillium digitatum PHI26]
Length = 880
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++A+S+E M+E + G + K + RSIMFN++ KN LR R+++G ++P+ L
Sbjct: 368 QLALSIEDAMYESICGRSGEPNESYKAQLRSIMFNVK--KNASLRDRLIIGSLSPKLLSQ 425
Query: 298 MSPEEMASDERQRQIENIKEKA 319
M+ EMAS+E Q++ IK +A
Sbjct: 426 MTTAEMASEELQQKDAEIKREA 447
>gi|340052391|emb|CCC46669.1| putative transcription elongation factor s-II [Trypanosoma vivax
Y486]
Length = 453
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 333 TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
T FKC CG+ +C++Y+ Q RSADEP T ++ C+ C W
Sbjct: 410 TSLFKCPNCGKNRCSFYEQQIRSADEPTTKFLRCLECKTSW 450
>gi|241952420|ref|XP_002418932.1| RNA polymerase III subunit C11, putative [Candida dubliniensis
CD36]
gi|223642271|emb|CAX44240.1| RNA polymerase III subunit C11, putative [Candida dubliniensis
CD36]
Length = 111
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T T Q CG K ++Q+Q RSADEPMTT+ CV C RWK
Sbjct: 56 GGEGTWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 109
>gi|448524457|ref|XP_003868992.1| Rpc11 RNA polymerase III subunit C11 [Candida orthopsilosis Co
90-125]
gi|380353332|emb|CCG26088.1| Rpc11 RNA polymerase III subunit C11 [Candida orthopsilosis]
Length = 111
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T T Q CG K ++Q+Q RSADEPMTT+ CV C RWK
Sbjct: 56 GGEGTWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 109
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 226 EADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKR 284
E +EE ID +++ +E +F+ + K KYRS++FNI+D KN L K+
Sbjct: 1145 EYNEEHID--------NLSIKIEEKLFKHFENKVDTKYKSKYRSLIFNIKDPKNETLYKK 1196
Query: 285 VLLGEVTPERLVTMSPEEMASD--------ERQRQIENIKEKALFECQRGG 327
++ ++P+ LV +SPEE+AS E Q Q+E IK+ L +G
Sbjct: 1197 IVDNLISPKDLVKLSPEELASQELARWREKENQHQLEMIKKTELELMTKGN 1247
>gi|238883920|gb|EEQ47558.1| DNA-directed RNA polymerases III 12.5 kDa polypeptide [Candida
albicans WO-1]
Length = 111
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T T Q CG K ++Q+Q RSADEPMTT+ CV C RWK
Sbjct: 56 GGEGTWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 109
>gi|354548243|emb|CCE44980.1| hypothetical protein CPAR2_407830 [Candida parapsilosis]
Length = 111
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T T Q CG K ++Q+Q RSADEPMTT+ CV C RWK
Sbjct: 56 GGEGTWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 109
>gi|68477699|ref|XP_717162.1| hypothetical protein CaO19.5360 [Candida albicans SC5314]
gi|68477862|ref|XP_717083.1| hypothetical protein CaO19.12820 [Candida albicans SC5314]
gi|46438781|gb|EAK98107.1| hypothetical protein CaO19.12820 [Candida albicans SC5314]
gi|46438863|gb|EAK98188.1| hypothetical protein CaO19.5360 [Candida albicans SC5314]
Length = 111
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T T Q CG K ++Q+Q RSADEPMTT+ CV C RWK
Sbjct: 56 GGEGTWDNVDQTAAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 109
>gi|242764560|ref|XP_002340799.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218723995|gb|EED23412.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 875
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ +SVE M+ L G A K + RSIMFN++ N LR R+L G + P L TM
Sbjct: 318 LGLSVEHAMYVNLCGGSGEPNDAYKNQLRSIMFNVK--ANSSLRDRLLSGSLAPSTLATM 375
Query: 299 SPEEMASDERQRQIENIKEKA 319
S ++MAS+E+Q++ IK A
Sbjct: 376 SSQDMASEEQQQKDAEIKRAA 396
>gi|390465645|ref|XP_003733445.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Callithrix jacchus]
Length = 1096
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+V P LV MS +
Sbjct: 539 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMSSRQ 598
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 599 LAPQELARWRDQEEKRGL 616
>gi|295658648|ref|XP_002789884.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282845|gb|EEH38411.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ +++E M++ L TG A K + R+I+FN+R KN LR +L+G ++P+ L TM
Sbjct: 324 LGLAIEHAMYKHLSGGTGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTM 381
Query: 299 SPEEMASDERQRQIENIKEKA 319
S +MAS E +++ + IK +A
Sbjct: 382 STHDMASKELRQKDDEIKREA 402
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++ S+E M++ + G T KL+ R+I+FN++ KNP LR R+L+G + P+ L
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E ++ I+ +A
Sbjct: 383 MSSQDMASEELLQKDAEIRREA 404
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYR 267
R +R+ LA L+ EA++ I E + +A+ +E MF K + TG + K KYR
Sbjct: 1299 RLTVRKTLAELLTSRVKEANDLAITEEEISE---LALQIELEMF-KFFKDTGQKYKSKYR 1354
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD--------ERQRQIENIKEKA 319
S++FNI+D KN L +++ ++P +V +SP+EMAS E + Q+E IK+
Sbjct: 1355 SLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENKHQLEMIKKNE 1414
Query: 320 L 320
L
Sbjct: 1415 L 1415
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 242 RVAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVT 297
++ S+E M++ + G T KL+ R+I+FN++ KNP LR R+L+G + P+ L
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 298 MSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E ++ I+ +A
Sbjct: 383 MSSQDMASEELLQKDAEIRREA 404
>gi|225682198|gb|EEH20482.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 897
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ +++E M++ L TG A K + R+I+FN+R KN LR +L+G ++P+ L TM
Sbjct: 325 LGLAIEHAMYKHLSGGTGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTM 382
Query: 299 SPEEMASDERQRQIENIKEKA 319
S +MAS E +++ + IK +A
Sbjct: 383 STHDMASKELRQKDDEIKREA 403
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYR 267
R +R+ LA L+ EA++ I E + +A+ +E MF K + TG + K KYR
Sbjct: 1306 RLTVRKTLAELLTSRVKEANDLAITEEEISE---LALQIELEMF-KFFKDTGQKYKSKYR 1361
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD--------ERQRQIENIKEKA 319
S++FNI+D KN L +++ ++P +V +SP+EMAS E + Q+E IK+
Sbjct: 1362 SLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENKHQLEMIKKNE 1421
Query: 320 L 320
L
Sbjct: 1422 L 1422
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 242 RVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
R+ +E + + G + K +YRSIMFN++DE+N L ++V++G+VT LV M+ E
Sbjct: 803 RLVDKIEDSLHKLFGETNVKYKNRYRSIMFNLKDERNHGLWRKVIIGDVTTSELVQMTAE 862
Query: 302 EMAS 305
+MAS
Sbjct: 863 QMAS 866
>gi|226290806|gb|EEH46271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 872
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKLGRSTG----AEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ +++E M++ L TG A K + R+I+FN+R KN LR +L+G ++P+ L TM
Sbjct: 300 LGLAIEHAMYKHLSGGTGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTM 357
Query: 299 SPEEMASDERQRQIENIKEKA 319
S +MAS E +++ + IK +A
Sbjct: 358 STHDMASKELRQKDDEIKREA 378
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 25/127 (19%)
Query: 209 RDKIRELLANALSKVTSEA------DEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
R IR+ L LS E DEEI D +A ++E ++ K + TGA+
Sbjct: 1270 RLNIRKTLTELLSSRIKETEDLKLTDEEIAD---------LAYNIELELY-KYFKDTGAK 1319
Query: 263 -KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD--------ERQRQIE 313
K KYRS++FNI+D KN L +++ +TP+ +V +SP+EMAS E + Q+E
Sbjct: 1320 YKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEWREKETKHQLE 1379
Query: 314 NIKEKAL 320
IK+ L
Sbjct: 1380 MIKKNEL 1386
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 172 VEKIIEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTS-EADEE 230
+E I EEE P++ + P+ T+ I SR ++E L + + E DE
Sbjct: 1688 IETINEEET-------PTKMAKSDPEATRSI-----SRSSLKEALWSRCKEANDVETDEA 1735
Query: 231 IIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGE 289
I+++V A +E +F G++ K KYRS++FNI+D KNP L + ++ +
Sbjct: 1736 IVEQV--------AKEIEESLFSLYKHDVGSKYKNKYRSLIFNIKDPKNPGLFREIITKQ 1787
Query: 290 VTPERLVTMSPEEMAS 305
+ P+ LV MS E++A+
Sbjct: 1788 LLPDELVKMSTEDLAN 1803
>gi|403217034|emb|CCK71529.1| hypothetical protein KNAG_0H01160 [Kazachstania naganishii CBS
8797]
Length = 110
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 326 GGEATATTDQFKC---SRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GG + +C +CG ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 57 GGWDNVDQTKVQCPNYDKCGGESAYFFQLQIRSADEPMTTFYKCVNCGNRWK 108
>gi|441636142|ref|XP_003276474.2| PREDICTED: SPOC domain-containing protein 1 [Nomascus leucogenys]
Length = 1522
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 183 PSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIR 242
P PS GT L + +REL LS EE+++ +
Sbjct: 900 PPTHLPSSGTKCLESLLGSVPLPCPGLHSLRELPDPVLS-------EEVVEGI------- 945
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 946 -AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 1004
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 1005 LAPQELARWRDQEEKRGL 1022
>gi|215274651|sp|P0C8F6.1|TFS2_ASFM2 RecName: Full=Transcription factor S-II-related protein
gi|450740|emb|CAA50848.1| transcription factor SII [African swine fever virus]
Length = 243
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 274 RDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATT 333
+++ D +++ GE+ PE+LV M+ E+ ++ I ++ + A T+
Sbjct: 147 HQQQDNDALNKLISGELKPEQLVGMTFAELCPSAALKEKTEITLRS-----QQKVAEKTS 201
Query: 334 DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+KC C QR CTY ++QTR+ DEP T + TC C +
Sbjct: 202 QLYKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEF 241
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 23/126 (18%)
Query: 209 RDKIRELLANALSKVTSEA------DEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE 262
R IR+ L LS E DEEI D +A ++E M++ +
Sbjct: 1306 RLNIRKTLTELLSSRIKETEDLKLTDEEIAD---------LAFNIELEMYKYFKDTGSKY 1356
Query: 263 KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASD--------ERQRQIEN 314
K KYRS++FNI+D KN L +++ +TP+ +V +SP+EMAS E + Q+E
Sbjct: 1357 KAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEWREKETKHQLEM 1416
Query: 315 IKEKAL 320
IK+ L
Sbjct: 1417 IKKNEL 1422
>gi|213404362|ref|XP_002172953.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
gi|212001000|gb|EEB06660.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
Length = 698
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 239 DPIRVAVSVESVMFEKLGR-------STGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVT 291
D + A+ +E MF +L A + K+R+I FN+ D++NP LR + GE+T
Sbjct: 203 DLVEFALQLERTMFIELSYKIDGNAIPNKAYRDKFRNIKFNLTDDRNPHLRASLFKGEIT 262
Query: 292 PERLVTMSPEEMASDERQRQIENIKEKA 319
P +LV M+ EEMA+ + + E I++++
Sbjct: 263 PVQLVHMTSEEMANPDLKVFAEQIRQQS 290
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 9/113 (7%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAE-KLKYR 267
R IR L L K ++D+ ++ E R+A ++E MF L R T + K KYR
Sbjct: 635 RQNIRRSLKEILWKRVIDSDDLVMVENEVA---RIASNIEREMF-NLYRDTDSRYKSKYR 690
Query: 268 SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
+IMFN++D KN L RVL E++ +LV + PE++AS +++ + KE L
Sbjct: 691 NIMFNLKDPKNQGLYHRVLKEEISLAKLVRLKPEDLAS----KKLSSWKETGL 739
>gi|449690494|ref|XP_002161127.2| PREDICTED: uncharacterized protein LOC100205379, partial [Hydra
magnipapillata]
Length = 1145
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R +R +L L + DE ++ +V + ++ +ES + + + K K RS
Sbjct: 18 RSSVRRVLRQVLVSRCKQ-DELLVIQVESIG--KLCKKIESELLKLFVETNNKYKAKSRS 74
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS--------DERQRQIENIKEKAL 320
++FN+RD +N L KRV+ GE+TP LV M+PE++A+ E + +E +K++ L
Sbjct: 75 LIFNLRDNQNKILYKRVVSGEITPYELVRMTPEQLATPALAQWREQESKHHLEMVKKREL 134
Query: 321 FECQ 324
E +
Sbjct: 135 EEAE 138
>gi|344302440|gb|EGW32714.1| hypothetical protein SPAPADRAFT_60072 [Spathaspora passalidarum
NRRL Y-27907]
Length = 101
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T T Q CG K ++Q+Q RSADEPMTT+ CV C RWK
Sbjct: 46 GGEGTWDDVDQTAAQCPIDSCGGMKAYFFQLQIRSADEPMTTFYKCVKCGHRWK 99
>gi|366988479|ref|XP_003674006.1| hypothetical protein NCAS_0A10670 [Naumovozyma castellii CBS 4309]
gi|342299869|emb|CCC67625.1| hypothetical protein NCAS_0A10670 [Naumovozyma castellii CBS 4309]
Length = 110
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 326 GGEATATTDQFKC---SRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GG + +C +CG ++Q+Q RSADEPMTT+ CVNC+ RWK
Sbjct: 57 GGWDNVDQTKVQCPNYEKCGGESAYFFQLQIRSADEPMTTFYKCVNCAHRWK 108
>gi|358369364|dbj|GAA85979.1| PHD finger domain protein [Aspergillus kawachii IFO 4308]
Length = 927
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 176 IEEEKQAPSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEV 235
++EE APS RK S A +T K D R+ +A AL K+ E + +
Sbjct: 309 VKEEPSAPSSRKSSAAGTA---VTDSSKSADQLTHPSRKSVAKALVKLFVEQITQAQERG 365
Query: 236 NACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERL 295
+ P V +L S + + R+IMFN++ KNP LR R+L+G ++P+ L
Sbjct: 366 SFQIPEGSGVKSVEEFARQLSLSLESAMSQLRTIMFNVK--KNPSLRDRLLVGSLSPDAL 423
Query: 296 VTMSPEEMASDERQRQIENIKEKA 319
MS ++MAS+E Q++ IK +A
Sbjct: 424 SKMSTQDMASEELQQKDAEIKREA 447
>gi|440790887|gb|ELR12150.1| RNA polymerase III, putative [Acanthamoeba castellanii str. Neff]
Length = 107
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Query: 285 VLLGEVTPER----LVTMSPEEMASDER--------QRQIENIKEKALFECQRGGEATAT 332
VLL E PE P D++ ++Q+++I +FE + EA
Sbjct: 11 VLLVEAGPENRLRFFCNTCPYVFGIDQKISKKAALERKQVDDILGDEVFENAQQTEA--- 67
Query: 333 TDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
KC CG + ++Q+QTRSADEP +T+ C+ C+ +WK
Sbjct: 68 ----KCPECGHDRANFFQLQTRSADEPSSTFYRCMKCASKWK 105
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +F + K KYRS++FN+RD +NP+L +V+ G++TP LV MS +
Sbjct: 696 IAAGIEAALFNLTQATNSRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 755
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 756 LAPQELARWRDREEKRGL 773
>gi|298714200|emb|CBJ27336.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 108
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTD--QFKCSRCGQRKCTYYQMQTRSADEPMTT 362
SD+ R+I +K+KA+ + G +A A D Q C C ++ + +Q RSADEPMT
Sbjct: 37 SDKITRKIA-LKKKAVDDIMGGDDAWANVDKTQTTCPFCNNKEAFFLMVQLRSADEPMTC 95
Query: 363 YVTCVNCSKRWK 374
+ C NC +RWK
Sbjct: 96 FYKCTNCKQRWK 107
>gi|449482931|ref|XP_004174984.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Taeniopygia
guttata]
Length = 381
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 152/356 (42%), Gaps = 49/356 (13%)
Query: 36 DALKRLKSFPVTYDVLVSTQVGKRL-RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNK 94
D LK L+ +T + L T+V K + R L P ++ A LL WK + +N
Sbjct: 49 DHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTLY-----KNN 103
Query: 95 KNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVSTAETVKVEKTGSVSRSETVQVE 154
S K SV+ V ++++ S V E++ + + E S + + +
Sbjct: 104 CAQSMPVKKSVSVYVK-------EEIEHLSVVPREQLLSEGPCQQEALDGTSSNSLIPSQ 156
Query: 155 KKE----TNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQ-LIKCNDSSR 209
+ +N + M+R + + + ++++ S+ + L Q L++ + R
Sbjct: 157 TVKNVVCSNAEGRMNRLSSFEAQHTVDDD---------SKFVVGEASLQQDLMR---ALR 204
Query: 210 DKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSI 269
K +LL AL + S DEE + + +A +E +F ++ K RS
Sbjct: 205 CKCVDLLYKAL--IDSAKDEEETGKW-----LELAKEIEEHIFALHAKNDKKYKNCIRSK 257
Query: 270 MFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEA 329
+ N+++ K+ L+ + G ++P+ M+ EMASDE ++ + ++ E Q
Sbjct: 258 ISNLKNPKSCHLKHNLFSGTLSPKAFAEMTVMEMASDELKQLRALYTKSSVQEHQLPQVI 317
Query: 330 TAT-TDQFKCSRCGQRKCTYYQM-----------QTRSADEPMTTYVTCVNCSKRW 373
T T++ KC RC + CT + + + DE M TYV C C ++W
Sbjct: 318 NGTQTNKIKCRRCEKFDCTVTMIARGTLFLPAWVRNTNPDEQMLTYVICNECGEQW 373
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+++ +ES +++ G + + KYRS++FNI+D KN L +R+ + P +LV +SP++
Sbjct: 853 ISLEIESQLYKCFGDTGQKYRNKYRSLIFNIKDIKNQTLWRRICEKTINPYQLVRLSPDD 912
Query: 303 MASDE----RQR----QIENIK--EKALFECQR 325
+AS E R+R Q++ IK E L +C R
Sbjct: 913 LASQELALWRERETKHQLDMIKKSELELLQCNR 945
>gi|296234921|ref|XP_002807916.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein
[Callithrix jacchus]
Length = 382
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 27/181 (14%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K ELL +AL+ TS D+ D A +E +F ++ K RS
Sbjct: 205 RTKCIELLYSALT--TSSTDQPRADLWQ-----NFAREIEEHVFTLYSKNIKKYKTCIRS 257
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQIEN-IKEKALFEC 323
+ N+++ KN L++ + G ++P MS EMA+ E R E+ I+E L +
Sbjct: 258 KVANLKNPKNSHLKQNLFSGTMSPREFAEMSVMEMANKELKQLRASYTESCIQEHYLPQV 317
Query: 324 QRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPMTTYVTCVNCSKR 372
G + T++ KC RC + C T + ++ +ADE M TYV C C ++
Sbjct: 318 IDGTQ----TNKIKCRRCEKYNCKVTTIARGTLFLPTWVRNSNADEQMMTYVICNECGEQ 373
Query: 373 W 373
W
Sbjct: 374 W 374
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|332004296|gb|AED91679.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 873
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E +++ G + + RS++FN++D+ NP+LR+RV+ E++ ERL +M
Sbjct: 260 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 319
Query: 299 SPEEMASDE 307
+ EE+AS E
Sbjct: 320 TAEELASKE 328
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%)
Query: 239 DPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
DP +A +E +++ G + + RS++FN++D+ NP+LR+RV+ E++ ERL +M
Sbjct: 258 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 317
Query: 299 SPEEMASDE 307
+ EE+AS E
Sbjct: 318 TAEELASKE 326
>gi|365982255|ref|XP_003667961.1| hypothetical protein NDAI_0A05630 [Naumovozyma dairenensis CBS 421]
gi|343766727|emb|CCD22718.1| hypothetical protein NDAI_0A05630 [Naumovozyma dairenensis CBS 421]
Length = 110
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 326 GGEATATTDQFKC---SRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GG + +C +CG ++Q+Q RSADEPMTT+ CVNC+ RWK
Sbjct: 57 GGWDNVDQTKVQCPNYEKCGGESAYFFQLQIRSADEPMTTFYKCVNCAHRWK 108
>gi|402909518|ref|XP_003917464.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Papio anubis]
Length = 350
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 197 KLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG 256
+L++L+ R K ELL AL+ +S AD+ D A +E +F
Sbjct: 161 RLSELLDPTTPMRTKCIELLYAALT--SSSADQPKADLWQ-----NFAREIEEHVFTLYS 213
Query: 257 RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQI 312
++ K RS + N+++ KN L++ +L G ++P M+ EMA+ E R
Sbjct: 214 KNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELKQLRASYT 273
Query: 313 EN-IKEKALFECQRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPM 360
E+ I+E L + G + T++ KC RC + C T + ++ + DE M
Sbjct: 274 ESCIQEHYLPQVIDGTQ----TNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQM 329
Query: 361 TTYVTCVNCSKRW 373
TYV C C ++W
Sbjct: 330 MTYVICNECGEQW 342
>gi|405121978|gb|AFR96746.1| RNA polymerase III smallest subunit [Cryptococcus neoformans var.
grubii H99]
Length = 118
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 309 QRQIE---NIKEKALFECQRGGEATATTDQFK--CSRCGQRKCTYYQMQTRSADEPMTTY 363
+RQI ++K K + + G EA A D+ C +C R+ + QMQ RSADEPMTT+
Sbjct: 36 ERQISMRTHLKRKEVDDVLGGKEAWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTF 95
Query: 364 VTCVNCSKRWK 374
C C +W+
Sbjct: 96 YKCCECGHQWR 106
>gi|303311679|ref|XP_003065851.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105513|gb|EER23706.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 848
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ ++E M++ L +G YR +I+FN+R KNP LR +L+G +TP+ M
Sbjct: 318 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 375
Query: 299 SPEEMASDERQRQIENIKEKA 319
S ++MAS+E +++ + IK +A
Sbjct: 376 STQDMASEELRQRDDEIKREA 396
>gi|320039752|gb|EFW21686.1| hypothetical protein CPSG_01843 [Coccidioides posadasii str.
Silveira]
Length = 848
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ ++E M++ L +G YR +I+FN+R KNP LR +L+G +TP+ M
Sbjct: 318 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 375
Query: 299 SPEEMASDERQRQIENIKEKA 319
S ++MAS+E +++ + IK +A
Sbjct: 376 STQDMASEELRQRDDEIKREA 396
>gi|224042778|ref|XP_002197835.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Taeniopygia
guttata]
Length = 360
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 155/357 (43%), Gaps = 51/357 (14%)
Query: 36 DALKRLKSFPVTYDVLVSTQVGKRL-RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNK 94
D LK L+ +T + L T+V K + R L P ++ A LL WK + +N
Sbjct: 28 DHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTLY-----KNN 82
Query: 95 KNGSTGDKSSVTTGVVKPDSGKIDKVQKTSAVKVEKVST-----AETVKVEKTGSVSRSE 149
S K SV+ V ++++ S V E++ + E + + S+ S+
Sbjct: 83 CAQSMPVKKSVSVYVK-------EEIEHLSVVPREQLLSEGPCQQEALDGTSSNSLIPSQ 135
Query: 150 TVQVEKKETNGDSVMDRGEAVKVEKIIEEEKQAPSVRKPSQGTIATPKLTQ-LIKCNDSS 208
TV+ +N + M+R + + + ++++ S+ + L Q L++ +
Sbjct: 136 TVK-NVVCSNAEGRMNRLSSFEAQHTVDDD---------SKFVVGEASLQQDLMR---AL 182
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K +LL AL + S DEE + + +A +E +F ++ K RS
Sbjct: 183 RCKCVDLLYKAL--IDSAKDEEETGKW-----LELAKEIEEHIFALHAKNDKKYKNCIRS 235
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N+++ K+ L+ + G ++P+ M+ EMASDE ++ + ++ E Q
Sbjct: 236 KISNLKNPKSCHLKHNLFSGTLSPKAFAEMTVMEMASDELKQLRALYTKSSVQEHQLPQV 295
Query: 329 ATAT-TDQFKCSRCGQRKCTYYQM-----------QTRSADEPMTTYVTCVNCSKRW 373
T T++ KC RC + CT + + + DE M TYV C C ++W
Sbjct: 296 INGTQTNKIKCRRCEKFDCTVTMIARGTLFLPAWVRNTNPDEQMLTYVICNECGEQW 352
>gi|79567610|ref|NP_180841.2| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|330253652|gb|AEC08746.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 249
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E++ELF+ AKK+AD A G + E S CVD L L F + + + ++ ++L L
Sbjct: 162 EMLELFEMAKKSADVANAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLERL 221
Query: 64 TKHPREKIQIVASNLLDIWKKIV 86
TKH KI A LL W++ +
Sbjct: 222 TKHKDRKICNAALALLHHWRQTI 244
>gi|119193931|ref|XP_001247569.1| hypothetical protein CIMG_01340 [Coccidioides immitis RS]
gi|392863190|gb|EAS36089.2| PHD finger domain-containing protein [Coccidioides immitis RS]
Length = 849
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYR----SIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ ++E M++ L +G YR +I+FN+R KNP LR +L+G +TP+ M
Sbjct: 319 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 376
Query: 299 SPEEMASDERQRQIENIKEKA 319
S ++MAS+E +++ + IK +A
Sbjct: 377 STQDMASEELRQRDDEIKREA 397
>gi|62184635|gb|AAR99369.2| hypothetical protein At2g32820 [Arabidopsis thaliana]
Length = 249
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E++ELF+ AKK+AD A G + E S CVD L L F + + + ++ ++L L
Sbjct: 162 EMLELFEMAKKSADVANAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLERL 221
Query: 64 TKHPREKIQIVASNLLDIWKKIV 86
TKH KI A LL W++ +
Sbjct: 222 TKHKDRKICNAALALLHHWRQTI 244
>gi|332223857|ref|XP_003261084.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Nomascus
leucogenys]
Length = 381
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 27/181 (14%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K ELL AL+ +S D+ D A +E +F + K RS
Sbjct: 204 RTKCIELLYAALT--SSSTDQPKADLWQ-----NFAREIEEHVFTLYSKDIKKYKTCIRS 256
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQIEN-IKEKALFEC 323
+ N+++ KN L++ +L G ++P M+ EMA+ E R E+ I+E L +
Sbjct: 257 KVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELKQLRASYTESCIQEHYLPQV 316
Query: 324 QRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPMTTYVTCVNCSKR 372
G + T++ KC RCG+ C T + ++ + DE M TYV C C ++
Sbjct: 317 IDGTQ----TNKIKCRRCGKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQ 372
Query: 373 W 373
W
Sbjct: 373 W 373
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 700 LAPQELARWRDQEEKRGL 717
>gi|20197064|gb|AAM14903.1| hypothetical protein [Arabidopsis thaliana]
Length = 333
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 4 ELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPL 63
E++ELF+ AKK+AD A G + E S CVD L L F + + + ++ ++L L
Sbjct: 246 EMLELFEMAKKSADVANAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLERL 305
Query: 64 TKHPREKIQIVASNLLDIWKKIV 86
TKH KI A LL W++ +
Sbjct: 306 TKHKDRKICNAALALLHHWRQTI 328
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 641 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 700
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 701 LAPQELARWRDQEEKRGL 718
>gi|261205282|ref|XP_002627378.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592437|gb|EEQ75018.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 873
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ +++E M++ L G + A K + R+I+FN+R KN LR +L+G ++P+ L TM
Sbjct: 300 LGLAIELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATM 357
Query: 299 SPEEMASDERQRQIENIKEKA 319
S ++MAS E +++ + IK +A
Sbjct: 358 STQDMASKELRQKDDEIKREA 378
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 700 LAPQELARWRDQEEKRGL 717
>gi|431909796|gb|ELK12942.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Pteropus alecto]
Length = 352
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K E+L AL+ +S D+ D ++ +A +E +F ++ K RS
Sbjct: 175 RTKCTEILREALT--SSSTDQPQADLWHS-----LAREIEGHIFTLYSKNLKKYKACIRS 227
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQIEN-IKEKALFEC 323
+ N+++ KN L++ +L G ++P M+ EMAS+E R E+ I+E L +
Sbjct: 228 KVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMASNELKQLRASYAESSIREHYLPQA 287
Query: 324 QRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPMTTYVTCVNCSKR 372
G + T + KC RC + C T + ++ + DE M TYV C C ++
Sbjct: 288 IEGTQ----TKKIKCRRCEKFNCKVTVIARGTLFLPSWVRNSNPDEEMMTYVICNECGEQ 343
Query: 373 W 373
W
Sbjct: 344 W 344
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 700 LAPQELARWRDQEEKRGL 717
>gi|403255274|ref|XP_003920366.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255276|ref|XP_003920367.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Saimiri boliviensis
boliviensis]
gi|403255278|ref|XP_003920368.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 27/181 (14%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K ELL +AL+ TS D+ D A +E +F ++ K RS
Sbjct: 173 RTKCIELLYSALT--TSSTDQPKADLWQ-----NFAREIEEHVFALYSKNIKKYKTCIRS 225
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQIEN-IKEKALFEC 323
+ N+++ KN L++ + G ++P+ M+ EMA+ E R E+ I+E L +
Sbjct: 226 KVANLKNPKNSHLKQNLFSGTMSPQEFAEMTVMEMANKELKQLRASYTESCIQEHYLPQV 285
Query: 324 QRGGEATATTDQFKCSRCGQRKCTYYQM-----------QTRSADEPMTTYVTCVNCSKR 372
G + T++ KC RC + C + + +ADE M TYV C C ++
Sbjct: 286 IDGTQ----TNKIKCRRCEKYNCKVTAIARGALFLPTWVRNSNADEQMMTYVICNECGEQ 341
Query: 373 W 373
W
Sbjct: 342 W 342
>gi|392300156|gb|EIW11247.1| Rpc11p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 110
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
CG ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 75 CGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWK 108
>gi|239611404|gb|EEQ88391.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 873
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ +++E M++ L G + A K + R+I+FN+R KN LR +L+G ++P+ L TM
Sbjct: 300 LGLAIELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATM 357
Query: 299 SPEEMASDERQRQIENIKEKA 319
S ++MAS E +++ + IK +A
Sbjct: 358 STQDMASKELRQKDDEIKREA 378
>gi|448925154|gb|AGE48734.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus AP110A]
Length = 194
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL-FECQRGGEATATTD-QF 336
PDL ++ G+ + V P E+ SD+ E +AL F + D
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARRALRFSDASSMDPADMADGML 141
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYV 364
+C +C RK +YY+MQTRSADEP ++V
Sbjct: 142 QCGKCKSRKTSYYEMQTRSADEPKMSWV 169
>gi|327285776|ref|XP_003227608.1| PREDICTED: transcription elongation factor B polypeptide 3-like
[Anolis carolinensis]
Length = 767
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 26 SGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRLRPLTKHPREKIQIVASNLLDIWKKI 85
SGG E + + LKRL P+T D+L+ T VGK + L KH E++ A NL+ WKK+
Sbjct: 17 SGGAEPKKLMKNLKRLSELPITVDILLETGVGKTVNGLRKH--EQVGDFAKNLVARWKKL 74
Query: 86 VIEETTRNKKNGSTGDKS 103
V + N D+S
Sbjct: 75 VPVPPEAERHNHEPADRS 92
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 205 NDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKL 264
N R IR L + L K S++D+ + E R+A ++E MF + K
Sbjct: 654 NTQMRQNIRRSLTDILFKRVSDSDDLKMTENEVG---RLAFAIEKEMFNLCLSTDSKYKN 710
Query: 265 KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE 307
KYR++M +++D KN L +V+ G+VTP RLV + EE+ S E
Sbjct: 711 KYRTLMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAEELVSRE 753
>gi|355559483|gb|EHH16211.1| TFIIS central domain-containing protein 1 [Macaca mulatta]
gi|355757190|gb|EHH60715.1| TFIIS central domain-containing protein 1 [Macaca fascicularis]
Length = 380
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 197 KLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG 256
+L++L+ R K ELL AL+ +S AD+ D A +E +F
Sbjct: 191 RLSELLDPITPMRTKCIELLYAALT--SSSADQPKADLWQ-----NFAREIEEHVFTLYS 243
Query: 257 RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQI 312
++ K RS + N+++ KN L++ +L G ++P M+ EMA+ E R
Sbjct: 244 KNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELKQLRASYT 303
Query: 313 EN-IKEKALFECQRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPM 360
E+ I+E L + G + T++ KC RC + C T + ++ + DE M
Sbjct: 304 ESCIQEHYLPQVIDGTQ----TNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQM 359
Query: 361 TTYVTCVNCSKRW 373
TYV C C ++W
Sbjct: 360 MTYVICNECGEQW 372
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G+VTP LV MS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 700 LAPQELARWRDQEEKRGL 717
>gi|6320250|ref|NP_010330.1| Rpc11p [Saccharomyces cerevisiae S288c]
gi|3334319|sp|Q04307.1|RPC10_YEAST RecName: Full=DNA-directed RNA polymerase III subunit RPC10;
Short=RNA polymerase III subunit C10; AltName:
Full=DNA-directed RNA polymerases III 12.5 kDa
polypeptide; AltName: Full=RNA polymerase III subunit
C11
gi|798898|emb|CAA89076.1| unknown [Saccharomyces cerevisiae]
gi|4210977|gb|AAD12060.1| RNA polymerase III C11 subunit [Saccharomyces cerevisiae]
gi|45269165|gb|AAS55962.1| YDR045C [Saccharomyces cerevisiae]
gi|151942036|gb|EDN60392.1| RNA polymerase C [Saccharomyces cerevisiae YJM789]
gi|190404984|gb|EDV08251.1| DNA-directed RNA polymerases III 12.5 kDa polypeptide
[Saccharomyces cerevisiae RM11-1a]
gi|256270826|gb|EEU05973.1| Rpc11p [Saccharomyces cerevisiae JAY291]
gi|259145290|emb|CAY78554.1| Rpc11p [Saccharomyces cerevisiae EC1118]
gi|285811069|tpg|DAA11893.1| TPA: Rpc11p [Saccharomyces cerevisiae S288c]
gi|349577114|dbj|GAA22283.1| K7_Rpc11p [Saccharomyces cerevisiae Kyokai no. 7]
gi|401626309|gb|EJS44261.1| rpc11p [Saccharomyces arboricola H-6]
Length = 110
Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
CG ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 75 CGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWK 108
>gi|327348586|gb|EGE77443.1| PHD finger domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 897
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 243 VAVSVESVMFEKL----GRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTM 298
+ +++E M++ L G + A K + R+I+FN+R KN LR +L+G ++P+ L TM
Sbjct: 324 LGLAIELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATM 381
Query: 299 SPEEMASDERQRQIENIKEKA 319
S ++MAS E +++ + IK +A
Sbjct: 382 STQDMASKELRQKDDEIKREA 402
>gi|313236269|emb|CBY11591.1| unnamed protein product [Oikopleura dioica]
Length = 109
Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 326 GGEAT---ATTDQFKCSR--CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GG+A A + + C+R C R+ ++Q+QTRSADEPMTT+ C +C+ +WK
Sbjct: 55 GGDAAWENADSMEEACTREGCTNRRAYFFQLQTRSADEPMTTFYRCTDCAHQWK 108
>gi|332223859|ref|XP_003261085.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Nomascus
leucogenys]
gi|441673101|ref|XP_004092410.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Nomascus leucogenys]
Length = 351
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 27/181 (14%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K ELL AL+ +S D+ D A +E +F + K RS
Sbjct: 174 RTKCIELLYAALT--SSSTDQPKADLWQ-----NFAREIEEHVFTLYSKDIKKYKTCIRS 226
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQIEN-IKEKALFEC 323
+ N+++ KN L++ +L G ++P M+ EMA+ E R E+ I+E L +
Sbjct: 227 KVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELKQLRASYTESCIQEHYLPQV 286
Query: 324 QRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPMTTYVTCVNCSKR 372
G + T++ KC RCG+ C T + ++ + DE M TYV C C ++
Sbjct: 287 IDGTQ----TNKIKCRRCGKYNCKVTVIDRGTLFLPSWVRNSNPDEQMMTYVICNECGEQ 342
Query: 373 W 373
W
Sbjct: 343 W 343
>gi|444323471|ref|XP_004182376.1| hypothetical protein TBLA_0I01990 [Tetrapisispora blattae CBS 6284]
gi|387515423|emb|CCH62857.1| hypothetical protein TBLA_0I01990 [Tetrapisispora blattae CBS 6284]
Length = 111
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
CG ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 76 CGGESAYFFQLQIRSADEPMTTFYKCVNCGNRWK 109
>gi|365761585|gb|EHN03230.1| Rpc11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 110
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
CG ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 75 CGGESAYFFQLQIRSADEPMTTFYKCVNCGNRWK 108
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 242 RVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
+V +E +F+ ++ K KYR++MFN++D N L +RVL G+++P +LV M+ E
Sbjct: 820 KVVNRIEHELFKLYQDTSSKYKAKYRTLMFNLKDVNNKGLFRRVLKGDISPSKLVGMTSE 879
Query: 302 EMASDE 307
+MA E
Sbjct: 880 QMACKE 885
>gi|50289467|ref|XP_447165.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526474|emb|CAG60098.1| unnamed protein product [Candida glabrata]
Length = 100
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
CG ++Q+Q RSADEPMTT+ CVNC+ RWK
Sbjct: 65 CGGESAYFFQLQIRSADEPMTTFYKCVNCAHRWK 98
>gi|109129943|ref|XP_001096593.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 1 [Macaca
mulatta]
gi|297303341|ref|XP_002806188.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 2 [Macaca
mulatta]
Length = 350
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 197 KLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG 256
+L++L+ R K ELL AL+ +S AD+ D A +E +F
Sbjct: 161 RLSELLDPITPMRTKCIELLYAALT--SSSADQPKADLWQ-----NFAREIEEHVFTLYS 213
Query: 257 RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQI 312
++ K RS + N+++ KN L++ +L G ++P M+ EMA+ E R
Sbjct: 214 KNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELKQLRASYT 273
Query: 313 EN-IKEKALFECQRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPM 360
E+ I+E L + G + T++ KC RC + C T + ++ + DE M
Sbjct: 274 ESCIQEHYLPQVIDGTQ----TNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQM 329
Query: 361 TTYVTCVNCSKRW 373
TYV C C ++W
Sbjct: 330 MTYVICNECGEQW 342
>gi|170097063|ref|XP_001879751.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645154|gb|EDR09402.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 106
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 329 ATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
A A Q C +C + +YQ+Q RSADEPMTT+ C +C+ +W+
Sbjct: 59 AHADQTQASCDKCNHDQAYFYQLQIRSADEPMTTFYRCTSCAHQWR 104
>gi|297665702|ref|XP_002811186.1| PREDICTED: SPOC domain-containing protein 1 [Pongo abelii]
Length = 1158
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL +V+ G VTP LV MS +
Sbjct: 595 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGAVTPYDLVRMSSMQ 654
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 655 LAPQELARWRDQEEKRGL 672
>gi|75057265|sp|Q9GMV6.1|TEANC_MACFA RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|9929973|dbj|BAB12143.1| hypothetical protein [Macaca fascicularis]
Length = 350
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 197 KLTQLIKCNDSSRDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLG 256
+L++L+ R K ELL AL+ +S AD+ D A +E +F
Sbjct: 161 RLSELLDPITPMRTKCIELLYAALT--SSSADQPKADLWQ-----NFAREIEEHVFTLYS 213
Query: 257 RSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE----RQRQI 312
++ K RS + N+++ KN L++ +L G ++P M+ EMA+ E R
Sbjct: 214 KNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELKQLRASYT 273
Query: 313 EN-IKEKALFECQRGGEATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPM 360
E+ I+E L + G + T++ KC RC + C T + ++ + DE M
Sbjct: 274 ESCIQEHYLPQVIDGTQ----TNKIKCRRCEKYNCKVTVIDRGTLFLPSWVRNSNPDEQM 329
Query: 361 TTYVTCVNCSKRW 373
TYV C C ++W
Sbjct: 330 MTYVICNECGEQW 342
>gi|448924785|gb|AGE48366.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus AN69C]
Length = 192
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 20/124 (16%)
Query: 250 VMFEKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPE 301
V+ +KLG + +R S+ +NI + DL ++ GE + + V P
Sbjct: 47 VICKKLGHDLKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLDKMKTGETSIKNFVNAKPW 104
Query: 302 EMASDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRS 355
E+ ++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQTRS
Sbjct: 105 EVCPEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQTRS 160
Query: 356 ADEP 359
ADEP
Sbjct: 161 ADEP 164
>gi|323305599|gb|EGA59340.1| Rpc11p [Saccharomyces cerevisiae FostersB]
gi|323309844|gb|EGA63047.1| Rpc11p [Saccharomyces cerevisiae FostersO]
gi|323334176|gb|EGA75559.1| Rpc11p [Saccharomyces cerevisiae AWRI796]
gi|323338304|gb|EGA79533.1| Rpc11p [Saccharomyces cerevisiae Vin13]
gi|323349328|gb|EGA83553.1| Rpc11p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355738|gb|EGA87553.1| Rpc11p [Saccharomyces cerevisiae VL3]
gi|365766551|gb|EHN08047.1| Rpc11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 100
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
CG ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 65 CGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWK 98
>gi|449266698|gb|EMC77719.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Columba livia]
Length = 360
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K +LL AL+ S D+E D+ + ++ +E +F ++ K RS
Sbjct: 183 RCKCTDLLYKALA--GSAKDKEETDKW-----LELSKEIEEHIFSLHAKNNKKYKNCIRS 235
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGE 328
+ N+++ K+ LR + G ++P+ M+ EMASDE ++ E ++ E Q
Sbjct: 236 KISNLKNPKSCHLRHNLFSGTLSPKAFAEMTVMEMASDELKQLRALYTESSVQEHQLPQV 295
Query: 329 ATAT-TDQFKCSRCGQRKCTYYQM-----------QTRSADEPMTTYVTCVNCSKRW 373
T T++ KC RC + CT + + + DE M TYV C C ++W
Sbjct: 296 INGTQTNKIKCRRCEKFDCTVTMIARGTLFLPGWVRNTNPDEQMLTYVICNECGEQW 352
>gi|19075622|ref|NP_588122.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59800464|sp|Q9Y7V2.3|BYE1_SCHPO RecName: Full=Transcription factor bye1
gi|4539285|emb|CAB39909.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe]
Length = 721
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 206 DSSRDKIRELLANA----LSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGA 261
D ++ +R+ +A A K+ +A E + + + +A+ +E +MF L +T
Sbjct: 211 DEIQNPVRKSVAKAWVSVFEKIIEKAKLEGVQGLEDLNSTSLALQLEHIMFMVLSYTTDH 270
Query: 262 E-------KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIEN 314
+ K+R++ FN+ D+KNP R RVL E++ LV +S EEMA+ + + E
Sbjct: 271 SLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEISFNDLVNLSSEEMANPDLKNLAEE 330
Query: 315 IKEKA 319
I++++
Sbjct: 331 IRQQS 335
>gi|403293239|ref|XP_003937628.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Saimiri boliviensis boliviensis]
Length = 1200
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 243 VAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEE 302
+A +E+ +++ + G K KYRS++FN+RD +N DL RV+ G+V P LV MS +
Sbjct: 637 IAAGIEAALWDLTQGTDGRYKAKYRSLLFNLRDPRNLDLFLRVVHGDVNPYDLVRMSSMQ 696
Query: 303 MASDERQRQIENIKEKAL 320
+A E R + +++ L
Sbjct: 697 LAPQELARWRDQEEKRGL 714
>gi|444509110|gb|ELV09184.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Tupaia chinensis]
Length = 351
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K ELL ALS + ID+ A +A +E ++ ++ K RS
Sbjct: 174 RTKCTELLYTALSNSS-------IDQPKASLWQNLAREIEEHVYTLHSKNLKKYKTCIRS 226
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE-CQRGG 327
+ N+++ KN L++ +L G ++P M+ EMAS E ++ + E + E C
Sbjct: 227 KVANLKNPKNSHLQQNLLSGTMSPREFAKMNVMEMASQELKQLRASYTESCIQEHCLPQT 286
Query: 328 EATATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPMTTYVTCVNCSKRW 373
T++ KC RC C T + ++ + DE M YV C C ++W
Sbjct: 287 IDGTPTNKIKCRRCENYNCKVTLITRGTLFLPSWVRNSNPDEQMMNYVICNECGEQW 343
>gi|170057596|ref|XP_001864553.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877015|gb|EDS40398.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 895
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 247 VESVMFEKLGRSTGAE-KLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMAS 305
VE MF + TG + + KYRS++FNI+D KN L +++ + +LV M+PEE+AS
Sbjct: 352 VEEEMFGMFNKDTGTKYRAKYRSLVFNIKDRKNLSLFQKICEKRIEARQLVRMTPEELAS 411
Query: 306 --------DERQRQIENIK--EKALFECQR 325
+E + Q+E IK E L C +
Sbjct: 412 QELAQWRENENKHQLEMIKKSELDLLACAK 441
>gi|194044760|ref|XP_001927509.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Sus scrofa]
gi|194044762|ref|XP_001927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Sus scrofa]
gi|194044764|ref|XP_001927522.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Sus scrofa]
gi|311275938|ref|XP_003134981.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275940|ref|XP_003134982.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275942|ref|XP_003134980.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
Length = 352
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K ELL AL+ ++E + R A +E +F ++ K RS
Sbjct: 175 RAKCTELLYEALAAFSTEQPRADLWH-------RFAQEIEECIFTLHAKNLKKYKTCIRS 227
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE--CQRG 326
+ N+++ +N LR+ +L G ++P M+ +MAS E ++ + E + E +G
Sbjct: 228 KIANLKNPRNSHLRENLLSGIMSPRAFAEMTVMDMASKELKQLRASYTESCIQEHSLPQG 287
Query: 327 GEATATTDQFKCSRCGQRKC---------TYYQMQTRSA--DEPMTTYVTCVNCSKRW 373
E T T + +C RC + C + R+A DE + TYV C C ++W
Sbjct: 288 VEGT-PTKKVRCRRCEKFNCQVTVIARGALFLPSWVRNAKPDEELMTYVICKECGEQW 344
>gi|410074205|ref|XP_003954685.1| hypothetical protein KAFR_0A01110 [Kazachstania africana CBS 2517]
gi|372461267|emb|CCF55550.1| hypothetical protein KAFR_0A01110 [Kazachstania africana CBS 2517]
Length = 110
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 326 GGEATATTDQFKC---SRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GG + +C +C ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 57 GGWDNVDQTKVQCPNYDKCAGESAYFFQLQIRSADEPMTTFYKCVNCGHRWK 108
>gi|448926725|gb|AGE50301.1| transcription elongation factor S-II [Acanthocystis turfacea
Chlorella virus Canal-1]
Length = 198
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 18/131 (13%)
Query: 235 VNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPER 294
V+ C +A++ ++ F R+ +K+ S+ +NIR PD+ ++++ G+ + +
Sbjct: 46 VDFCKKREIALNWDNFAF----RNIYTQKI--LSVRYNIR--LRPDILEQMIAGQASIRQ 97
Query: 295 LVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTY 348
V P E+ ++ E ++AL R +A+ + +C +CG +K +Y
Sbjct: 98 FVEAKPHEICPEKWAEAFEQSAKRAL----RFSDASCMDPKDMPDGMLQCRKCGSKKTSY 153
Query: 349 YQMQTRSADEP 359
Y++QTRSADEP
Sbjct: 154 YELQTRSADEP 164
>gi|187608701|ref|NP_001120586.1| transcription elongation factor A (SII) N-terminal and central
domain containing [Xenopus (Silurana) tropicalis]
gi|171846965|gb|AAI61589.1| LOC100145741 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 209 RDKIRELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRS 268
R K ELL AL + SE E++ + +A ++E +++ +T + RS
Sbjct: 175 RTKCTELLYQALRE-DSECQEKLQN---------LAKAIEENIYKIHAGNTKKYRNCIRS 224
Query: 269 IMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQR-GG 327
+ N+++ KN L+ ++L ++P+ M EMA DE + N E + E Q G
Sbjct: 225 KISNLKNPKNSHLKMQILSRALSPKVFAEMGVMEMACDELRNLRANYTETCVQEHQLPQG 284
Query: 328 EATATTDQFKCSRCGQRKCTYYQM-----------QTRSADEPMTTYVTCVNCSKRW 373
T++ +C RC + CT + +T + DE M T+V C C ++W
Sbjct: 285 VDGVHTNKIRCRRCDKFNCTVTMISRGTLFLPGWVRTGNPDEEMMTFVICNECGEQW 341
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 11/83 (13%)
Query: 242 RVAVSVESVMFEKLGRSTGAEKL-KYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMS- 299
++ +E+ MF+ + R+T ++ + KYR+IMFN++D KN L RV+ GE+ P RLV MS
Sbjct: 578 KLVACIETEMFD-IFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEIGPFRLVRMSQ 636
Query: 300 --------PEEMASDERQRQIEN 314
PE A+++ Q Q +N
Sbjct: 637 KDMQAITAPEPKAAEKSQDQKKN 659
>gi|395840531|ref|XP_003793109.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Otolemur garnettii]
Length = 352
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 159 NGDSVMDRGEAVKVEKIIEEEKQAPSVR-KPSQGTIATPKLT-----QLIKCNDSSRDKI 212
+ + V+ E K+ KII E A + K PK T +L+ R K
Sbjct: 119 SSNFVLSSQEVAKLSKIIVPENSAIQMECKEEHLGGGDPKSTGKRSVELLDPTTPMRTKC 178
Query: 213 RELLANALSKVTSEADEEIIDEVNACDPIRVAVSVESVMFEKLGRSTGAEKLKYRSIMFN 272
ELL AL+ ++ D+ A A +E +F + ++ K RS + N
Sbjct: 179 VELLYTALTGSST-------DQPKAPLWQNFAREIEEHIFTRYSKNIKKYKTCIRSKVAN 231
Query: 273 IRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFE--CQRGGEAT 330
+++ +N L++ +L G ++P M+ EMA++E ++ + E + E +G + T
Sbjct: 232 LKNPRNSHLQQNLLSGALSPREFAEMTVMEMANEELKQLRASYTESCIQEHYLPQGIDGT 291
Query: 331 ATTDQFKCSRCGQRKC--------TYY---QMQTRSADEPMTTYVTCVNCSKRW 373
T + +C RC + C T + ++ + DE M TYV C C ++W
Sbjct: 292 QT-KKIRCRRCEKYNCKVTVIARGTLFLPSWVRNSNPDEQMMTYVICNECGEQW 344
>gi|324544072|gb|ADY49673.1| DNA-directed RNA polymerase III subunit RPC10 [Ascaris suum]
Length = 108
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 328 EATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVN--CSKRWK 374
E TD+ +C RCG + + Q+QTRSADEPMT + C N C+ RWK
Sbjct: 60 ENAQITDE-RCPRCGGDRAYFMQLQTRSADEPMTVFYRCANSECAHRWK 107
>gi|256077126|ref|XP_002574859.1| DNA-directed RNA polymerase [Schistosoma mansoni]
gi|108861851|gb|ABG21827.1| RNA polymerase III subunit C11-like protein [Schistosoma mansoni]
gi|353229178|emb|CCD75349.1| putative DNA-directed RNA polymerase [Schistosoma mansoni]
Length = 115
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 294 RLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQT 353
R P + RQ ++E A+F + ++A TD+ KC +C + + QMQT
Sbjct: 34 RWFVTQPLVLEHKPRQDVRLRLEEDAVFSVEDEYSSSAQTDE-KCPKCSHTRAYFVQMQT 92
Query: 354 RSADEPMTTYVTCVNCSKRW 373
RSADEP T +C+ C W
Sbjct: 93 RSADEPSTIKYSCIKCHHIW 112
>gi|406604219|emb|CCH44305.1| DNA-directed RNA polymerase III subunit [Wickerhamomyces ciferrii]
Length = 111
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 332 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T Q CG K ++Q+Q RSADEPMTT++ CV C +W+
Sbjct: 67 TAAQCPIDSCGNDKAYFFQLQIRSADEPMTTFLKCVKCGHQWR 109
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 252 FEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDE---- 307
+ + + K KYRS++FNI+D KN + K+++ VTP +LV M+ +EMAS E
Sbjct: 1030 YNQFSKVDQKYKTKYRSLLFNIKDPKNLNFFKKIMFKWVTPYQLVRMTADEMASQELAEW 1089
Query: 308 RQR----QIENIKEKAL 320
R+R QIE I++ L
Sbjct: 1090 RERENKHQIEMIRKTEL 1106
>gi|307104138|gb|EFN52393.1| hypothetical protein CHLNCDRAFT_138851 [Chlorella variabilis]
Length = 92
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 302 EMASDERQRQIENIKEKALFECQRGGEA----TATTDQFKCSRCGQRKCTYYQMQTRSAD 357
E+ RQ + ++ E GGEA T+ +CS CG Y Q+Q RSAD
Sbjct: 14 ELEEGGRQSEFFMSQKTKKIEPVLGGEAEWRSAPRTEHTRCSECGHNVAFYQQVQNRSAD 73
Query: 358 EPMTTYVTCVNCSKRWK 374
EP TTY C C+K W+
Sbjct: 74 EPATTYFRCTRCAKVWQ 90
>gi|448927189|gb|AGE50763.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVB-1]
Length = 195
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ--- 335
PDL ++ G+ + V P E+ SD+ E +AL R +A++ +
Sbjct: 83 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARRAL----RFSDASSMDPENMP 138
Query: 336 ---FKCSRCGQRKCTYYQMQTRSADEPMTTYV 364
C +C RK +YY+MQTRSADEP ++V
Sbjct: 139 DGLLMCGKCKSRKTSYYEMQTRSADEPKMSWV 170
>gi|215274650|sp|P0C8F5.1|TFS2_ASFK5 RecName: Full=Transcription factor S-II-related protein
Length = 243
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 274 RDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATT 333
+++ D +++ GE+ PE + +M+ E+ ++ I ++ + A T+
Sbjct: 147 HQQQDNDALNKLISGELKPEAIGSMTFAELCPSAALKEKTEITLRS-----QQKVAEKTS 201
Query: 334 DQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRW 373
+KC C QR CTY ++QTR+ DEP T Y TC C +
Sbjct: 202 QLYKCPNCKQRMCTYREVQTRALDEPSTIYCTCKKCGHEF 241
>gi|393216306|gb|EJD01796.1| hypothetical protein FOMMEDRAFT_20569 [Fomitiporia mediterranea
MF3/22]
Length = 106
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 326 GGEAT---ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GG+A A + C +C + +YQ+Q RSADEPMTT+ C C+ +W+
Sbjct: 53 GGDAAWNDADSTTVACPKCDNDRAYFYQLQIRSADEPMTTFYRCTTCTYQWR 104
>gi|448933656|gb|AGE57211.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus NE-JV-4]
Length = 192
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE + + V P E+
Sbjct: 50 KKLGHDLKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLDKMKTGETSIKNFVNAKPWEVC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQTRSADE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQTRSADE 163
Query: 359 P 359
P
Sbjct: 164 P 164
>gi|254580487|ref|XP_002496229.1| ZYRO0C13574p [Zygosaccharomyces rouxii]
gi|238939120|emb|CAR27296.1| ZYRO0C13574p [Zygosaccharomyces rouxii]
Length = 110
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 326 GGEATATTDQFKC---SRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GG + +C +C ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 57 GGWDNVDQTKVQCPNYDKCAGESAYFFQLQIRSADEPMTTFFKCVNCGNRWK 108
>gi|294658313|ref|XP_460643.2| DEHA2F06556p [Debaryomyces hansenii CBS767]
gi|202953038|emb|CAG88975.2| DEHA2F06556p [Debaryomyces hansenii CBS767]
Length = 111
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T Q CG K ++Q+Q RSADEPMTT+ CV CS +W+
Sbjct: 56 GGEGAWDNVDQTLAQCPIDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCSHQWR 109
>gi|448930217|gb|AGE53782.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus IL-3A]
Length = 192
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 253 EKLGRSTGAEKLKYR--------SIMFNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMA 304
+KLG + +R S+ +NI + DL ++ GE + + V P E+
Sbjct: 50 KKLGHDLKWDNFTFRNRYTQKILSVRYNIGLRQ--DLLDKMKTGETSIKNFVNSKPWEVC 107
Query: 305 SDERQRQIENIKEKALFECQRGGEATATTDQ------FKCSRCGQRKCTYYQMQTRSADE 358
++ ++ E+ +KAL R +A+A + +C +C RK +YY+MQTRSADE
Sbjct: 108 PEKWEKAFEDAAKKAL----RFTDASAMDPKDMPDGMLQCGKCKSRKTSYYEMQTRSADE 163
Query: 359 P 359
P
Sbjct: 164 P 164
>gi|385305484|gb|EIF49450.1| rna polymerase iii c11 subunit [Dekkera bruxellensis AWRI1499]
Length = 112
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 326 GGEAT-----ATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE T Q CG K Y+Q+Q RSADEPMTT+ C C RW+
Sbjct: 57 GGEGAWDNVDQTNAQCPVETCGSNKAYYFQIQIRSADEPMTTFYKCCKCGHRWR 110
>gi|426328836|ref|XP_004025454.1| PREDICTED: SPOC domain-containing protein 1 [Gorilla gorilla
gorilla]
Length = 1173
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 212 IRELLANALSKVTSEADEEIIDEVNACDPIR-VAVSVESVMFEKLGRSTGAEKLKYRSIM 270
+R + ++ +V +E+ D V + + + +A +E+ +++ + G K KYRS++
Sbjct: 608 VRGTVVRSMQEVLWTRLQELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 271 FNIRDEKNPDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKAL 320
FN+RD +N DL +V+ G+V P LV MS ++A E R + +++ L
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVNPYDLVRMSSMQLAPQELARWRDQEEKRGL 717
>gi|449684343|ref|XP_004210603.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
[Hydra magnipapillata]
Length = 74
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 337 KCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
KC +C +K + Q+QTRSADEPMTT+ C +C RWK
Sbjct: 36 KCPKCEFKKAYFMQIQTRSADEPMTTFYKCCSCGHRWK 73
>gi|66362552|ref|XP_628242.1| RNA polymerase III subunit C11 [Cryptosporidium parvum Iowa II]
gi|46229854|gb|EAK90672.1| RNA polymerase III subunit C11 [Cryptosporidium parvum Iowa II]
Length = 62
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 338 CSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
C +C + ++Q+Q RSADEPMT++ TCV C +WK
Sbjct: 24 CPKCSFSEAYFFQLQIRSADEPMTSFYTCVKCDFKWK 60
>gi|401411477|ref|XP_003885186.1| hypothetical protein NCLIV_055830 [Neospora caninum Liverpool]
gi|325119605|emb|CBZ55158.1| hypothetical protein NCLIV_055830 [Neospora caninum Liverpool]
Length = 106
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 322 ECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
E RG +A A+ C +C + +Y++Q RSADEPMT + C NC RW+
Sbjct: 57 EASRGAKAPAS-----CPKCSHTEAYFYEIQIRSADEPMTAFYCCCNCRFRWR 104
>gi|58269278|ref|XP_571795.1| RNA polymerase III smallest subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228031|gb|AAW44488.1| RNA polymerase III smallest subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 132
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 309 QRQIE---NIKEKALFECQRGGEATATTDQF--KCSRCGQRKCTYYQMQTRSADEPMTTY 363
+RQI ++K K + + G EA A D+ C +C R+ + QMQ RSADEPMTT+
Sbjct: 34 ERQISMRTHLKRKEVDDVLGGKEAWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTF 93
Query: 364 VTCVNCSKRWK 374
C C +W+
Sbjct: 94 YKCCECGHQWR 104
>gi|134114353|ref|XP_774105.1| hypothetical protein CNBG4050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256738|gb|EAL19458.1| hypothetical protein CNBG4050 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 132
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 309 QRQIE---NIKEKALFECQRGGEATATTDQF--KCSRCGQRKCTYYQMQTRSADEPMTTY 363
+RQI ++K K + + G EA A D+ C +C R+ + QMQ RSADEPMTT+
Sbjct: 34 ERQISMRTHLKRKEVDDVLGGKEAWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTF 93
Query: 364 VTCVNCSKRWK 374
C C +W+
Sbjct: 94 YKCCECGHQWR 104
>gi|448927516|gb|AGE51089.1| transcription elongation factor S-II [Paramecium bursaria Chlorella
virus CVG-1]
Length = 194
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 279 PDLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFECQRGGEATATTDQ--- 335
PDL ++ G+ + V P E+ SD+ E K L R +A++ +
Sbjct: 82 PDLMDKMKTGDCSIRWFVNAKPWEICSDKWTDAFEAAARKTL----RFSDASSMDPENMP 137
Query: 336 ---FKCSRCGQRKCTYYQMQTRSADEPMTTYV 364
C +C RK +YY+MQTRSADEP ++V
Sbjct: 138 DGMLSCGKCKSRKTSYYEMQTRSADEPKMSWV 169
>gi|344228978|gb|EGV60864.1| zinc beta-ribbon protein [Candida tenuis ATCC 10573]
Length = 101
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 326 GGE-ATATTDQF--KCSR--CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
GGE A DQ +C R CG K ++Q+Q RSADEPMTT+ CV CS +W+
Sbjct: 46 GGEGAWDNVDQTPAQCPRDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCSHQWR 99
>gi|196010167|ref|XP_002114948.1| hypothetical protein TRIADDRAFT_28961 [Trichoplax adhaerens]
gi|190582331|gb|EDV22404.1| hypothetical protein TRIADDRAFT_28961 [Trichoplax adhaerens]
Length = 106
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 310 RQIENI-KEKALFECQRGGEATATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVN 368
+Q+++I KA +E EAT C +C + + Q+QTRSADEPMT + C +
Sbjct: 47 KQVDDILGGKAAWENVDSTEAT-------CPKCDHNQAFFMQIQTRSADEPMTVFYKCCS 99
Query: 369 CSKRWK 374
C RWK
Sbjct: 100 CGHRWK 105
>gi|451927375|gb|AGF85253.1| transcription factor [Moumouvirus goulette]
Length = 170
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 266 YRSIMFNIRDEKNP--DLRKRVLLGEVTPERLVTMSPEEMASDERQRQIENIKEKALFEC 323
YR+++FN+++ + ++++ +L + L + P+E+ D I+ I K E
Sbjct: 62 YRNLIFNLKENCDTIKEIKQLILENKYNAYNLAFLKPDELNKDN---WIKIISRKKTTE- 117
Query: 324 QRGGEATATTDQFK-CSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
++ + A ++K C C + Y Q+QTRSADEPMTT+ TC C+K +K
Sbjct: 118 EKLNDLPAV--EWKPCRACKNTEYFYRQLQTRSADEPMTTFYTCKKCNKTYK 167
>gi|260941386|ref|XP_002614859.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851282|gb|EEQ40746.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 111
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 332 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T Q CG K ++Q+Q RSADEPMTT+ C CS +W+
Sbjct: 67 TAAQCPIDSCGNDKAYFFQLQIRSADEPMTTFYKCTKCSHQWR 109
>gi|367013272|ref|XP_003681136.1| hypothetical protein TDEL_0D03410 [Torulaspora delbrueckii]
gi|359748796|emb|CCE91925.1| hypothetical protein TDEL_0D03410 [Torulaspora delbrueckii]
Length = 110
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 341 CGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
C ++Q+Q RSADEPMTT+ CVNC RWK
Sbjct: 75 CAGESAYFFQLQIRSADEPMTTFYKCVNCGNRWK 108
>gi|321261337|ref|XP_003195388.1| RNA polymerase III smallest subunit [Cryptococcus gattii WM276]
gi|317461861|gb|ADV23601.1| RNA polymerase III smallest subunit, putative [Cryptococcus gattii
WM276]
Length = 131
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 309 QRQIE---NIKEKALFECQRGGEATATTDQF--KCSRCGQRKCTYYQMQTRSADEPMTTY 363
+RQI ++K K + + G EA A D+ C +C R+ + QMQ RSADEPMTT+
Sbjct: 34 ERQISMRTHLKRKEVDDVLGGKEAWANVDKTDTACPKCDHRRAYFRQMQIRSADEPMTTF 93
Query: 364 VTCVNCSKRWK 374
C C +W+
Sbjct: 94 YKCCECGHQWR 104
>gi|146419525|ref|XP_001485724.1| hypothetical protein PGUG_01395 [Meyerozyma guilliermondii ATCC
6260]
Length = 111
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 332 TTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
T Q CG K ++Q+Q RSADEPMTT+ CV C+ +W+
Sbjct: 67 TAAQCPVDSCGGDKAYFFQLQIRSADEPMTTFYKCVKCNHQWR 109
>gi|225712014|gb|ACO11853.1| DNA-directed RNA polymerase III subunit RPC10 [Lepeophtheirus
salmonis]
Length = 108
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 338 CSRCGQRKCTYYQMQTRSADEPMTTYVTCVNCSKRWK 374
C C + + Q+QTRSADEPMTT+ CV+C RW+
Sbjct: 71 CPNCDHHRAYFMQIQTRSADEPMTTFYKCVSCGHRWR 107
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.127 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,200,930,240
Number of Sequences: 23463169
Number of extensions: 199039230
Number of successful extensions: 642234
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 1173
Number of HSP's that attempted gapping in prelim test: 637455
Number of HSP's gapped (non-prelim): 5070
length of query: 376
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 232
effective length of database: 8,980,499,031
effective search space: 2083475775192
effective search space used: 2083475775192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)