BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017149
(376 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
+++ ++ PP+ GGFR+ ++D ++ + P+GW + + S TH D ++P+P KFDP F
Sbjct: 309 QEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFT 368
Query: 303 NQASI---PPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNF-FSRNP 358
S PP+ +VPFG G R C G EFAR+E + +I F W LL N P
Sbjct: 369 PDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTP 428
Query: 359 TSFPSKGLPVQI 370
+ P L V++
Sbjct: 429 SPRPKDNLRVKL 440
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 28 LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIFIHGQAANK 87
+PPG G+P +G++L FL+ + + R +++ PI K LFGK IFI G AN+
Sbjct: 13 IPPGDFGLPWLGETLNFLND------GDFGKKRQQQFGPIFKTRLFGKNVIFISGALANR 66
Query: 88 LVFSSDSNSISNQQTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESLKKYVGKIDG 147
+F+ + + + ++LG +L G+ HR R L P +L Y+ K+DG
Sbjct: 67 FLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDG 126
Query: 148 EIRQHIEFHRQGKEQVTVLPLMKTLTFNIICSFLFGLERGKQRDQFLGGLQDMIKGAWAV 207
++ ++E + E V P ++ +TF++ + G E+ Q Q + I+G +++
Sbjct: 127 IVQGYLEQWGKANE-VIWYPQLRRMTFDVAATLFMG-EKVSQNPQLFPWFETYIQGLFSL 184
Query: 208 PVNLP 212
P+ LP
Sbjct: 185 PIPLP 189
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQ 304
++FP R KD+E IP+G + + H D + EP KF P F +N+
Sbjct: 344 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 403
Query: 305 ASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
+I PY Y PFG+GPR C G FA + +A+ ++ +F +K
Sbjct: 404 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQ 304
++FP R KD+E IP+G + + H D + EP KF P F +N+
Sbjct: 343 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 402
Query: 305 ASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
+I PY Y PFG+GPR C G FA + +A+ ++ +F +K
Sbjct: 403 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQ 304
++FP R KD+E IP+G + + H D + EP KF P F +N+
Sbjct: 345 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 404
Query: 305 ASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
+I PY Y PFG+GPR C G FA + +A+ ++ +F +K
Sbjct: 405 DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 143/346 (41%), Gaps = 59/346 (17%)
Query: 41 SLAFLHAIRSNTAEQWLELRARKYD---PISKLNLFGKPTIFIHGQAANKLVFSSDSNSI 97
SL L + AEQ +E+ K D P+S ++ + I +AA F +++ +
Sbjct: 101 SLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAA----FGMETSML 156
Query: 98 SNQQ---TQAITLILGDRSLLNLTGQDHRRVRDALLSFL--KPESLKKYVGKIDGEIRQH 152
Q +QA+ L+L +T R+ L FL K + L+ E+R+
Sbjct: 157 LGAQKPLSQAVKLMLE-----GITAS-----RNTLAKFLPGKRKQLR--------EVRES 198
Query: 153 IEFHRQ-GKEQV----TVLPLMKTLTFNIICSFLFGLERGKQRDQFLGGLQD-----MIK 202
I F RQ G++ V L + + +I+ L E G Q D+ GL D I
Sbjct: 199 IRFLRQVGRDWVQRRREALKRGEEVPADILTQILKA-EEGAQDDE---GLLDNFVTFFIA 254
Query: 203 GAWAVPVNLPFKTRRMNL--TIRSFKQEEIAKGKQRGEFLTWEDLAKM------------ 248
G +L F ++ I + Q E+ + +L +EDL ++
Sbjct: 255 GHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLR 314
Query: 249 -FPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASI 307
+PP +G FR ++ +P + + V DT F +P F+P F A
Sbjct: 315 LYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPK 374
Query: 308 PPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNF 353
P + Y PF G R C G +FA++E V + ++ +++L+ F
Sbjct: 375 PRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRF 420
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 61 ARKYDPISKLNLFGKPTIFIHG-QAANKLVFSSDSNSISNQQTQAITLILGDRSLLNLTG 119
A+KY P+ ++N+F K ++ + ++ K + S+ N S + +A+ + G+R L G
Sbjct: 20 AKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDS-KMYRALQTVFGER----LFG 74
Query: 120 Q------------DHRRVRDALLSFLKPESLKKYVGKIDGEIRQHIEFHRQGKEQVTVLP 167
Q RRV D S SL + + ++ + +E G+ V++
Sbjct: 75 QGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQD 134
Query: 168 LMKTLTFNIICSFLFGLE 185
++ +I+ FG+E
Sbjct: 135 MLTYTAMDILAKAAFGME 152
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R CPG
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACPG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 454
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ RK LK ++ G+YV+PEG I ++H D+ FP P +++P E +
Sbjct: 326 PPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNP---ERNMKLVD 382
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
+ FGAG C G +F ++ + ++ + ++LL
Sbjct: 383 GAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFELL 421
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G +I + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 349 GEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 408
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 409 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 459
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACEG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ RK + D++ G YV+P+G I ++H D+ FPEP ++DP E
Sbjct: 327 PPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--- 383
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +F ++ + + ++LL
Sbjct: 384 -AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 421
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ RK + D++ G YV+P+G I ++H D+ FPEP ++DP E
Sbjct: 327 PPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--- 383
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +F ++ + + ++LL
Sbjct: 384 -AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 421
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ RK + D++ G YV+P+G I ++H D+ FPEP ++DP E
Sbjct: 328 PPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--- 384
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +F ++ + + ++LL
Sbjct: 385 -AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 422
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ RK + D++ G YV+P+G I ++H D+ FPEP ++DP E
Sbjct: 326 PPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--- 382
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +F ++ + + ++LL
Sbjct: 383 -AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 420
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 405
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 406 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 456
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 405
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 406 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 456
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 405
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 406 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 456
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ RK + D++ G YV+P+G I ++H D+ FPEP ++DP E
Sbjct: 340 PPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--- 396
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +F ++ + + ++LL
Sbjct: 397 -AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 434
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ RK + D++ G YV+P+G I ++H D+ FPEP ++DP E
Sbjct: 340 PPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEG--- 396
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +F ++ + + ++LL
Sbjct: 397 -AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 434
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 454
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 454
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 454
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 KQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D T++ + +F P FEN ++IP + + PFG G R C G
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + KG ++ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTLKPKGFVIKAKSKKI 454
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D T++ + +F P FEN ++IP + + PFG G R C G
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 454
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 262 DIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVPFGAGP 319
D+++ Y+IP+G I + D+ FP P FDP F ++ ++PF AG
Sbjct: 356 DVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGK 415
Query: 320 RICPGYEFARIETLVAIHYIITHFKWKLL 348
RIC G AR+E + + +I+ +F K L
Sbjct: 416 RICVGEGLARMELFLFLTFILQNFNLKSL 444
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + P+G G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPYGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 262 DIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQASIPPYCYVPFGAGP 319
D ++ Y+IP+G I + + DD FP P+ FDP F +N ++PF AG
Sbjct: 355 DTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGK 414
Query: 320 RICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGL 366
RIC G AR+E + + I+ +F K + D+ + N T+ +KG+
Sbjct: 415 RICAGEGLARMELFLFLTTILQNFNLKSV--DDLKNLNTTAV-TKGI 458
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 24/184 (13%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG +PIIG L I + ++ Y P+ + P +
Sbjct: 3 KKTSSKGKLPPGPTPLPIIGNML----QIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVV 58
Query: 80 IHGQAANKLVFSSDSNSISNQQ----TQAITLILGDRSLLNLTGQDHRRVRDALLSFLKP 135
HG A K + S + +Q IT LG +++ G+ + +R L+ L+
Sbjct: 59 FHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLG---IISSNGKRWKEIRRFSLTTLRN 115
Query: 136 ESLKKYVGKIDGEIRQHIEFHRQGKE--QVTVLPLMKTLTF-----NIICSFLFGLERGK 188
+ GK E R E H +E + P T N+ICS +F +R
Sbjct: 116 FGM----GKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQ-KRFD 170
Query: 189 QRDQ 192
+DQ
Sbjct: 171 YKDQ 174
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E+ + PP+ R A D+ G + +P+G + + + H D TI P +FDP
Sbjct: 294 EETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP---- 349
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPT 359
++A I ++ FG G C G AR+E VA+ + F L + + RN T
Sbjct: 350 DRAQI---RHLGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEPEYKRNLT 403
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + +G V+ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPEGFVVKAKSKKI 454
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPEGFVVKAKSKKI 453
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 228 EEIAKGKQRGEFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDD 287
E++ K + G + + ++ P ++ R+A+ + E G Y IP G I + D
Sbjct: 316 EDVRKLRHTGNVIV--EAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 288 TIFPEPSKFDPS--IFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKW 345
+ + +FDP + E A++P Y PF AG R CP F+ + + + T +++
Sbjct: 374 KSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
Query: 346 KLLCSDNFFSR 356
+ + N R
Sbjct: 434 EQVAGSNDAVR 444
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETQLLKPEGFVVKAKSKKI 453
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPEGFVVKAKSKKI 453
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + PFG G R C G
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIG 403
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + +G V+ KKI
Sbjct: 404 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPEGFVVKAKSKKI 454
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEP-SKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + P+G G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPWGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYC--YVP 314
+A +D + Y+IP+G + D+ FP+P KF P F N+ Y + P
Sbjct: 349 HEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKP 408
Query: 315 FGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCS 350
F G R+C G AR+E + + I+ HF K L
Sbjct: 409 FSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVD 444
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG +PIIG L + + A+++ P+ L + + +
Sbjct: 3 KKTSSKGKLPPGPFPLPIIGN----LFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVV 58
Query: 80 IHGQAANKLVFSSDSNSISNQQTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESLK 139
+HG A K + S + DR ++ G + +R L+ +L+
Sbjct: 59 MHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLT-----TLR 113
Query: 140 KY-VGKIDGEIRQHIEFH 156
Y +GK E R E H
Sbjct: 114 NYGMGKQGNESRIQREAH 131
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + P G G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPHGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
Query: 238 EFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFD 297
E L +E++ ++ G R A +D+EY I +G +F + D T+F P FD
Sbjct: 293 EVLRFENILRI-----GTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFD 347
Query: 298 PSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRN 357
+ AS+ +G GP +CPG AR+E +A+ I F L F +
Sbjct: 348 VR-RDTSASLA------YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPVFGYH 400
Query: 358 PTSFPSKGLPVQITPKK 374
P + L V + P K
Sbjct: 401 PAFRNIESLNVILKPSK 417
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPYCYVPFGAGPRICPG 324
G Y + +G ++ + H D TI+ + +F P FEN ++IP + + P G G R C G
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPAGNGQRACIG 402
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPKKI 375
+FA E + + ++ HF ++ + + + +G V+ KKI
Sbjct: 403 QQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKI 453
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 261 KDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVPFGAG 318
+D+ + Y IP+G I + D+ FP P FDP F +++ ++PF AG
Sbjct: 351 RDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAG 410
Query: 319 PRICPGYEFARIETLVAIHYIITHFKWKLL 348
R+C G AR+E + + I+ +FK + L
Sbjct: 411 KRMCVGEGLARMELFLFLTSILQNFKLQSL 440
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG PIIG L I + + L + Y P+ + L KPT+
Sbjct: 3 KKTSSKGKLPPGPTPFPIIGNIL----QIDAKDISKSLTKFSECYGPVFTVYLGMKPTVV 58
Query: 80 IHGQAANK 87
+HG A K
Sbjct: 59 LHGYEAVK 66
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 254 GGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYV 313
G R A +D+EY I +G +F + D T+F P FD + AS+
Sbjct: 304 GTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVR-RDTSASLA----- 357
Query: 314 PFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFPSKGLPVQITPK 373
+G GP +CPG AR+E +A+ I F L F +P + L V + P
Sbjct: 358 -YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPVFGYHPAFRNIESLNVILKPS 416
Query: 374 K 374
K
Sbjct: 417 K 417
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 262 DIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVPFGAGP 319
DI++ Y+IP+G I + D+ FP P FDP F ++ ++PF AG
Sbjct: 356 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 415
Query: 320 RICPGYEFARIETLVAIHYIITHFKWKLL 348
RIC G A +E + + I+ +F K L
Sbjct: 416 RICVGEALAGMELFLFLTSILQNFNLKSL 444
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 19 TRRRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPT 77
++ SS +G LPPG +P+IG L I + L ++ Y P+ L KP
Sbjct: 2 AKKTSSGRGKLPPGPTPLPVIGNIL----QIGIKDISKSLTNLSKVYGPVFTLYFGLKPI 57
Query: 78 IFIHGQAANK 87
+ +HG A K
Sbjct: 58 VVLHGYEAVK 67
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 262 DIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVPFGAGP 319
DI++ Y+IP+G I + D+ FP P FDP F ++ ++PF AG
Sbjct: 354 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 413
Query: 320 RICPGYEFARIETLVAIHYIITHFKWKLL 348
RIC G A +E + + I+ +F K L
Sbjct: 414 RICVGEALAGMELFLFLTSILQNFNLKSL 442
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 21 RRSSAKGLPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIFI 80
+++S+KG PPG +P+IG L I + L ++ Y P+ L KP + +
Sbjct: 3 KKTSSKGRPPGPTPLPVIGNIL----QIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVL 58
Query: 81 HGQAANK 87
HG A K
Sbjct: 59 HGYEAVK 65
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 238 EFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFD 297
E L +A M P KA D G + + +G ++ H ++ + +P +F
Sbjct: 341 EVLRLRPVAPMLIP-----HKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFM 395
Query: 298 PSIFENQASI----PPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKL 347
P F N A P Y+PFGAGPR C G AR E + + +++ F ++
Sbjct: 396 PERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 266 GRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPS-IFENQASIPPYCYVPFGAGPRICPG 324
G Y +P+G + V + F + KF P + + I P+ ++PFG G R+C G
Sbjct: 373 GEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGKRMCIG 432
Query: 325 YEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSF-------PSKGLPVQITPK 373
A ++ +A+ +II K+ ++ +DN P PS+ LP+ P+
Sbjct: 433 RRLAELQLHLALCWIIQ--KYDIVATDN----EPVEMLHLGILVPSRELPIAFRPR 482
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A +D E IP G +F A V H D +F + +FD ++ SI FG
Sbjct: 296 RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKREAPSI------AFG 349
Query: 317 AGPRICPGYEFARIETLVAIHYIITHFK 344
GP C G AR+E A+ + T
Sbjct: 350 GGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A +D E IP G +F A V H D +F + +FD ++ SI FG
Sbjct: 306 RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKREAPSI------AFG 359
Query: 317 AGPRICPGYEFARIETLVAIHYIITHFK 344
GP C G AR+E A+ + T
Sbjct: 360 GGPHFCLGTALARLELTEAVAALATRLD 387
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQASIPPY 310
FG KD ++ YVIP+ ++F V S D F P+ F+P F N A
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 311 CYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
++PF G RIC G AR E + I+ +F
Sbjct: 406 GFMPFSLGKRICAGEGIARTELFLFFTTILQNF 438
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG +P++G L R +L LR KY + + L +P +
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGN---LLQMDRKGLLRSFLRLR-EKYGDVFTVYLGSRPVVV 58
Query: 80 IHGQAANKLVFSSDSNSISNQ-QTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESL 138
+ G A + + + S + + + I ++ G+ R +R L+ ++ +
Sbjct: 59 LCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGM 118
Query: 139 KK--YVGKIDGEIRQHIEFHRQGKEQVTVLPLM-KTLTFNIICSFLFG 183
K +I E R +E R+ K + L+ ++T NIICS +FG
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFG 166
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ R +++ G YV+P+G I ++H D+ FP P +DP E
Sbjct: 331 PPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDG--- 387
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +FA ++ + + ++LL
Sbjct: 388 -AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLL 425
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQASIPPY 310
FG KD ++ YVIP+ ++F V S D F P+ F+P F N A
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 311 CYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
++PF G RIC G AR E + I+ +F
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG +P++G L R +L LR KY + + L +P +
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGN---LLQMDRKGLLRSFLRLR-EKYGDVFTVYLGSRPVVV 58
Query: 80 IHGQAANKLVFSSDSNSISNQ-QTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESL 138
+ G A + + + S + + + I ++ G+ R +R L+ ++ +
Sbjct: 59 LCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGM 118
Query: 139 KK--YVGKIDGEIRQHIEFHRQGKEQVTVLPLM-KTLTFNIICSFLFG 183
K +I E R +E R+ K + L+ ++T NIICS +FG
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFG 166
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQASIPPY 310
FG KD ++ YVIP+ ++F V S D F P+ F+P F N A
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 311 CYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
++PF G RIC G AR E + I+ +F
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG +P++G L R +L LR KY + + L +P +
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGN---LLQMDRKGLLRSFLRLR-EKYGDVFTVYLGSRPVVV 58
Query: 80 IHGQAANKLVFSSDSNSISNQ-QTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESL 138
+ G A + + + S + + + I ++ G+ R +R L+ ++ +
Sbjct: 59 LCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGM 118
Query: 139 KK--YVGKIDGEIRQHIEFHRQGKEQVTVLPLM-KTLTFNIICSFLFG 183
K +I E R +E R+ K + L+ ++T NIICS +FG
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFG 166
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQASIPPY 310
FG KD ++ YVIP+ ++F V S D F P+ F+P F N A
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 311 CYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
++PF G RIC G AR E + I+ +F
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG +P++G L R +L LR KY + + L +P +
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGN---LLQMDRKGLLRSFLRLR-EKYGDVFTVYLGSRPVVV 58
Query: 80 IHGQAANKLVFSSDSNSISNQ-QTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESL 138
+ G A + + + S + + + I ++ G+ R +R L+ ++ +
Sbjct: 59 LCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGM 118
Query: 139 KK--YVGKIDGEIRQHIEFHRQGKEQVTVLPLM-KTLTFNIICSFLFG 183
K +I E R +E R+ K + L+ ++T NIICS +FG
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFG 166
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ R +++ G YV+P+G I ++H D+ FP P +DP E
Sbjct: 325 PPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDG--- 381
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +FA ++ + + ++LL
Sbjct: 382 -AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLL 419
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 250 PPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
PP+ R +++ G YV+P+G I ++H D+ FP P +DP E
Sbjct: 340 PPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVDG--- 396
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
++ FGAG C G +FA ++ + + ++LL
Sbjct: 397 -AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLL 434
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQASIPPY 310
FG KD ++ YVIP+ ++F V S D F P+ F+P F N A
Sbjct: 346 FGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE 405
Query: 311 CYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
++PF G RIC G AR E + I+ +F
Sbjct: 406 GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIF 79
+++S+KG LPPG +P++G L R +L LR KY + + L +P +
Sbjct: 3 KKTSSKGKLPPGPSPLPVLGN---LLQMDRKGLLRSFLRLR-EKYGDVFTVYLGSRPVVV 58
Query: 80 IHGQAANKLVFSSDSNSISNQ-QTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESL 138
+ G A + + + S + + + I ++ G+ R +R L+ ++ +
Sbjct: 59 LCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGM 118
Query: 139 KK--YVGKIDGEIRQHIEFHRQGKEQVTVLPLM-KTLTFNIICSFLFG 183
K +I E R +E R+ K + L+ ++T NIICS +FG
Sbjct: 119 GKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFG 166
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 261 KDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVPFGAG 318
+DIE + IP+G + S D+ ++ +P +F P F + + P ++PF AG
Sbjct: 358 RDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAG 417
Query: 319 PRICPGYEFARIETLVAIHYIITHFKWKL 347
R C G AR+E + ++ HF + +
Sbjct: 418 RRACLGEPLARMELFLFFTSLLQHFSFSV 446
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
++ +++PP + R+ + + G +P+G + VT FPE F P F
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQ--RLYFPEGEAFQPERFL 316
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFP 362
+ P Y PFG G R+C G +FA +E + + F+ L ++ T P
Sbjct: 317 AERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQV-TLRP 375
Query: 363 SKGLPVQ 369
GLP +
Sbjct: 376 EGGLPAR 382
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 261 KDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVPFGAG 318
+DIE + IP+G + S D+ ++ +P +F P F + + P ++PF AG
Sbjct: 358 RDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAG 417
Query: 319 PRICPGYEFARIETLVAIHYIITHFKWKL 347
R C G AR+E + ++ HF + +
Sbjct: 418 RRACLGEPLARMELFLFFTSLLQHFSFSV 446
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 268 YVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFGAGPRICPGYEF 327
Y IPEG + H+D+T++ +P +F P F + P + FG G R+C G
Sbjct: 375 YDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANP--SALAFGCGARVCLGESL 432
Query: 328 ARIETLVAIHYIITHF 343
AR+E V + ++ F
Sbjct: 433 ARLELFVVLARLLQAF 448
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 43 AFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIFIHGQAANKLVFSSD--------- 93
FLH ++ N L L +K P+ +L L + + ++ + +
Sbjct: 36 GFLHLLQPNLPIHLLSL-TQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ 94
Query: 94 --SNSISNQQTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESLKKYVGKIDGEIRQ 151
S + +Q+ Q I+L GD SLL + H+++ + L S++ +V ++ E +
Sbjct: 95 IPSYKLVSQRCQDISL--GDYSLL---WKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCE 149
Query: 152 HIEFHRQGKEQVTVLPLMKTLTFNIICSFLFGLERGKQRDQFLGGLQDMIK 202
+ Q VT+ LT +IIC FG + F +QD++K
Sbjct: 150 RMRV--QAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMK 198
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P+ R D E+ + G ++ + + D+ +F EP KFD +
Sbjct: 268 EEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFD--VQR 325
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF-KWKLLCSDNFFSRNPTSF 361
N P ++ FG G C G + AR+E + ++ +L+ D+ P +F
Sbjct: 326 N-----PNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPANF 380
Query: 362 PS--KGLPVQITPK 373
S + +PV TP
Sbjct: 381 VSGLESMPVVFTPS 394
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVP 314
R+ KD ++ + +P+G +++ + D + F P F+P F N+ +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 315 FGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
F G R C G AR+E + ++ +F+ K
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELR--ARKYDPISKLNLFGKPT 77
+++S+KG LPPG +P IG L NT + + L + +Y P+ ++L +
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQL------NTEQMYNSLMKISERYGPVFTIHLGPRRV 56
Query: 78 IFIHGQAANKLVFSSDSNSISNQQTQA-ITLILGDRSLLNLTGQDHRRVRDALLSFLKPE 136
+ + G A + + S + QA + ++ G+ +++R ++ L+
Sbjct: 57 VVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 137 SLKKYVGKIDGEIRQHIEF---HRQGKEQVTVLP---LMKTLTFNIICSFLFGLERGKQR 190
+ K I+ I++ F +G + P L +T++ N+I S +FG +
Sbjct: 117 GVGKR--GIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVS-NVISSIVFGDRFDYKD 173
Query: 191 DQFLGGLQDMI 201
+FL L+ M+
Sbjct: 174 KEFLSLLRMML 184
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVP 314
R+ KD ++ + +P+G +++ + D + F P F+P F N+ +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 315 FGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
F G R C G AR+E + ++ +F+ K
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELR--ARKYDPISKLNLFGKPT 77
+++S+KG LPPG +P IG L NT + + L + +Y P+ ++L +
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQL------NTEQMYNSLMKISERYGPVFTIHLGPRRV 56
Query: 78 IFIHGQAANKLVFSSDSNSISNQQTQA-ITLILGDRSLLNLTGQDHRRVRDALLSFLKPE 136
+ + G A + + S + QA + ++ G+ +++R ++ L+
Sbjct: 57 VVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 137 SLKKYVGKIDGEIRQHIEF---HRQGKEQVTVLP---LMKTLTFNIICSFLFGLERGKQR 190
+ K I+ I++ F +G + P L +T++ N+I S +FG +R +
Sbjct: 117 GVGKR--GIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVS-NVISSIVFG-DRFDYK 172
Query: 191 DQFLGGLQDMIKGAW 205
D+ L M+ G++
Sbjct: 173 DKEFLSLLRMMLGSF 187
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVP 314
R+ KD ++ + +P+G +++ + D + F P F+P F N+ +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 315 FGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
F G R C G AR+E + ++ +F+ K
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELR--ARKYDPISKLNLFGKPT 77
+++S+KG LPPG +P IG L NT + + L + +Y P+ ++L +
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQL------NTEQMYNSLMKISERYGPVFTIHLGPRRV 56
Query: 78 IFIHGQAANKLVFSSDSNSISNQQTQA-ITLILGDRSLLNLTGQDHRRVRDALLSFLKPE 136
+ + G A + + S + QA + ++ G+ +++R ++ L+
Sbjct: 57 VVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 137 SLKKYVGKIDGEIRQHIEF---HRQGKEQVTVLP---LMKTLTFNIICSFLFGLERGKQR 190
+ K I+ I++ F +G + P L +T++ N+I S +FG +
Sbjct: 117 GVGKR--GIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVS-NVISSIVFGDRFDYKD 173
Query: 191 DQFLGGLQDMI 201
+FL L+ M+
Sbjct: 174 KEFLSLLRMML 184
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVP 314
R+ KD ++ + +P+G +++ + D + F P F+P F N+ +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 315 FGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
F G R C G AR+E + ++ +F+ K
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELR--ARKYDPISKLNLFGKPT 77
+++S+KG LPPG +P IG L NT + + L + +Y P+ ++L +
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQL------NTEQMYNSLMKISERYGPVFTIHLGPRRV 56
Query: 78 IFIHGQAANKLVFSSDSNSISNQQTQA-ITLILGDRSLLNLTGQDHRRVRDALLSFLKPE 136
+ + G A + + S + QA + ++ G+ +++R ++ L+
Sbjct: 57 VVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 137 SLKKYVGKIDGEIRQHIEF---HRQGKEQVTVLP---LMKTLTFNIICSFLFGLERGKQR 190
+ K I+ I++ F +G + P L +T++ N+I S +FG +
Sbjct: 117 GVGKR--GIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVS-NVISSIVFGDRFDYKD 173
Query: 191 DQFLGGLQDMI 201
+FL L+ M+
Sbjct: 174 KEFLSLLRMML 184
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVP 314
R+ KD ++ + +P+G +++ + D + F P F+P F N+ +VP
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVP 409
Query: 315 FGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
F G R C G AR+E + ++ +F+ K
Sbjct: 410 FSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELR--ARKYDPISKLNLFGKPT 77
+++S+KG LPPG +P IG L NT + + L + +Y P+ ++L +
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQL------NTEQMYNSLMKISERYGPVFTIHLGPRRV 56
Query: 78 IFIHGQAANKLVFSSDSNSISNQQTQA-ITLILGDRSLLNLTGQDHRRVRDALLSFLKPE 136
+ + G A + + S + QA + ++ G+ +++R ++ L+
Sbjct: 57 VVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 137 SLKKYVGKIDGEIRQHIEF---HRQGKEQVTVLP---LMKTLTFNIICSFLFGLERGKQR 190
+ K I+ I++ F +G + P L +T++ N+I S +FG +
Sbjct: 117 GVGKR--GIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVS-NVISSIVFGDRFDYKD 173
Query: 191 DQFLGGLQDMI 201
+FL L+ M+
Sbjct: 174 KEFLSLLRMML 184
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 234 KQRGEFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQI-FWVASVTHMDDTIFPE 292
+++G E+ + PP+ R + ++ VI EG + W+AS D+ +F +
Sbjct: 236 REKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANR-DEEVFKD 294
Query: 293 PSKFDPSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWK 346
P F P P ++ FG+G +C G AR+E +A+ F+ K
Sbjct: 295 PDSFIPDR-------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVK 341
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQI-FWVASVTHMDDTIFPEPSKFDPSIF 301
E+ + PP+ RK + ++ G I EG + W+AS D+ +F + KF P
Sbjct: 245 EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR-DEEVFHDGEKFIPDR- 302
Query: 302 ENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFK 344
P ++ FG+G +C G AR+E +AI F+
Sbjct: 303 ------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQI-FWVASVTHMDDTIFPEPSKFDPSIF 301
E+ + PP+ RK + ++ G I EG + W+AS D+ +F + KF P
Sbjct: 245 EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANR-DEEVFHDGEKFIPDR- 302
Query: 302 ENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFK 344
P ++ FG+G +C G AR+E +AI F+
Sbjct: 303 ------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 268 YVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQASIPPYCYVPFGAGPRICPGY 325
Y+IP+ ++F + S D F +P F+P F N A ++PF G RIC G
Sbjct: 361 YIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGE 420
Query: 326 EFARIETLVAIHYIITHF 343
AR E + I+ +F
Sbjct: 421 GIARAELFLFFTTILQNF 438
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R AL+D+E I G ++ + D +FP+P + D FE P +
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERS----PNPH 343
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
V FG GP CPG AR+E+ + + ++
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R AL+D+E I G ++ + D +FP+P + D FE P +
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERS----PNPH 343
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
V FG GP CPG AR+E+ + + ++
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R AL+D+E I G ++ + D +FP+P + D FE P +
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERS----PNPH 343
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
V FG GP CPG AR+E+ + + ++
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R AL+D+E I G ++ + D +FP+P + D FE P +
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERS----PNPH 343
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
V FG GP CPG AR+E+ + + ++
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R AL+D+E I G ++ + D +FP+P + D FE P +
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERS----PNPH 343
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
V FG GP CPG AR+E+ + + ++
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R AL+D+E I G ++ + D +FP+P + D FE P +
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERS----PNPH 343
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
V FG GP CPG AR+E+ + + ++
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R AL+D+E I G ++ + D +FP+P + D FE P +
Sbjct: 291 VGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERS----PNPH 343
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
V FG GP CPG AR+E+ + + ++
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVL 371
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 263 IEYGRYVIPEGWQIFWVASVTHMDDTIFPEPS--KFDPSIFEN-QASIPPYC-------- 311
+E G Y I + I + H+D I+P+P K+D + EN + YC
Sbjct: 357 LEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYY 416
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
Y+PFG+G ICPG FA E + ++++F+ +L+
Sbjct: 417 YMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELI 453
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 263 IEYGRYVIPEGWQIFWVASVTHMDDTIFPEPS--KFDPSIFEN-QASIPPYC-------- 311
+E G Y I + I + H+D I+P+P K+D + EN + YC
Sbjct: 357 LEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYY 416
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLL 348
Y+PFG+G ICPG FA E + ++++F+ +L+
Sbjct: 417 YMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELI 453
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 261 KDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQAS--IPPYCYVPFGAG 318
KD ++ + +P+G ++F + D F P F+P F ++ +VPF G
Sbjct: 354 KDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIG 413
Query: 319 PRICPGYEFARIETLVAIHYIITHFKWK 346
R C G AR+E + I+ +F++K
Sbjct: 414 KRYCFGEGLARMELFLFFTTIMQNFRFK 441
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 21 RRSSAKG-LPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELR--ARKYDPISKLNLFGKPT 77
+++S+KG LPPG +P IG L NT + + L + +Y P+ ++L +
Sbjct: 3 KKTSSKGKLPPGPTPLPFIGNYLQL------NTEQMYNSLMKISERYGPVFTIHLGPRRV 56
Query: 78 IFIHGQAANKLVFSSDSNSISNQQTQA 104
+ + G A K + S + QA
Sbjct: 57 VVLCGHDAVKEALVDQAEEFSGRGEQA 83
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
++ +++PP + R+ + + G +P G + VT FP+ F P F
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFL 316
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFP 362
+ P Y PFG G R+C G +FA +E + + F+ L ++ T P
Sbjct: 317 EERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPRVLAQV-TLRP 375
Query: 363 SKGLPVQ 369
GLP +
Sbjct: 376 EGGLPAR 382
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 14/228 (6%)
Query: 24 SAKGLPPGSLGIPIIGQSLAFL-HAIR-SNTAEQWLELRARKYDPISKLNLFGKPTIFIH 81
+ K LP G P I + FL HAI + ++LE KY P+ + GK ++
Sbjct: 2 AKKTLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLL 61
Query: 82 GQAANKLVFSSDSNSISNQQ--TQAITLILGDRSLLNLTGQDHRRVRDALLSFLKPESLK 139
G A L+F+S + ++ + ++ T + G ++ + L S L K
Sbjct: 62 GSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFK 121
Query: 140 KYVGKIDGEIRQHIEFHRQGKEQVTVLPLMKTLTFNIICSFLFGLERGKQRDQFLGGLQD 199
++V I+ E +++ E + E+ V + L L G E Q ++ + L
Sbjct: 122 QHVSIIEKETKEYFESWGESGEK-NVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYA 180
Query: 200 MIKG-----AWAVPVNLPFKT-RRMNLTIRSFKQ---EEIAKGKQRGE 238
+ G AW +P LP + RR + R K + I K +Q E
Sbjct: 181 DLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQE 228
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIF--ENQ 304
++ PPI R A Y IP G Q+ +V + E F+P + +N
Sbjct: 324 RLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNP 383
Query: 305 ASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFF 354
AS + YVPFGAG C G FA ++ ++ +++ L+ D +F
Sbjct: 384 ASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLI--DGYF 431
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 15/112 (13%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E+ + P R A +DI+ I +G Q++ + + D +IF P FD
Sbjct: 272 EECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD----- 326
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYI--------ITHFKWK 346
+ P ++ FG G +C G AR+E +AI+ + + F+W+
Sbjct: 327 --ITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFEWR 376
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 234 KQRGEFLTWEDLAKMFPPI-FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPE 292
K R F+ E+ + + PI F R A +D I +G Q+ + D+T F E
Sbjct: 216 KNRSGFV--EETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDE 273
Query: 293 PSKFDPSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFK 344
P F E ++ FG G +C G AR+E +A++ I+ HFK
Sbjct: 274 PDLFKIGRRE--------MHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
FGG R A +D+E G I +G Q+ D EP +FD + P +
Sbjct: 286 FGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD-------ITRRPAPH 338
Query: 313 VPFGAGPRICPGYEFARIE 331
+ FG G C G + ARIE
Sbjct: 339 LAFGFGAHQCIGQQLARIE 357
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
FGG R A +D+E G I +G Q+ D EP +FD + P +
Sbjct: 286 FGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD-------ITRRPAPH 338
Query: 313 VPFGAGPRICPGYEFARIE 331
+ FG G C G + ARIE
Sbjct: 339 LAFGFGAHQCIGQQLARIE 357
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
FGG R A +D+E G I +G Q+ D EP +FD + P +
Sbjct: 286 FGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFD-------ITRRPAPH 338
Query: 313 VPFGAGPRICPGYEFARIE 331
+ FG G C G + ARIE
Sbjct: 339 LAFGFGAHQCIGQQLARIE 357
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 251 PIFGGFRKALKDIEY-GRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPP 309
P+ R A D E G+ + W + + H D FPEP KFDP+ N+
Sbjct: 335 PVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANH-DPAQFPEPRKFDPTRPANR----- 388
Query: 310 YCYVPFGAGPRICPGYEFARIETLVAIHYII 340
++ FGAG C G AR+E V + ++
Sbjct: 389 --HLAFGAGSHQCLGLHLARLEMRVLLDVLL 417
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + FP + R KD EY + G I ++ +DD PEP K D S
Sbjct: 328 EEMFRRFP-VVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFS--- 383
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAI 336
+ SI + FG GP C G AR+E +V +
Sbjct: 384 -RRSI---SHSTFGGGPHRCAGMHLARMEVIVTL 413
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 21 RRSSAKGLPPGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDPISKLNLFGKPTIFI 80
+++S+KG PPG P+IG + A A + A AR+Y + ++ L P + +
Sbjct: 3 KKTSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARL-----ARRYGDVFQIRLGSCPIVVL 57
Query: 81 HGQAANKLVFSSDSNSISNQQTQA-ITLILGDRSLLNLTGQDHRRV-RDALLSFLK---- 134
+G+ A ++ +++ + A ++ G RS+ +H +V R A S ++
Sbjct: 58 NGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFT 117
Query: 135 --PESLKKYVGKIDGEIRQHIEFHRQGKEQVTVL---PLMKTLTFNIICSFLFGLERGKQ 189
P S + G + E R+ + +G L PL N++ + FG
Sbjct: 118 RQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHD 177
Query: 190 RDQF 193
+F
Sbjct: 178 DPEF 181
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + FP + R KD EY + G I ++ +DD PEP K D S
Sbjct: 293 EEMFRRFP-VVSEARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFS--- 348
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAI 336
+ SI + FG GP C G AR+E +V +
Sbjct: 349 -RRSI---SHSTFGGGPHRCAGMHLARMEVIVTL 378
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 224 SFKQEEIAKGKQRGEFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVT 283
+F+ +E A+ E + +M PP R +D+E G +I G I ++
Sbjct: 258 AFRNDESARAAIINE------MVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAA 311
Query: 284 HMDDTIFPEPSKFDPSIFENQASIPPYCY--VPFGAGPRICPGYEFARIETLVAIHYIIT 341
+ D +F +P FD + PP + FG GP C G +R E +
Sbjct: 312 NRDPEVFDDPDVFD-------HTRPPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAE 364
Query: 342 HFKWKLLCSDNFFSRNPTSFPSKGLPVQIT 371
++ L + + N + + LP+ ++
Sbjct: 365 RYERIELAEEPTVAHNDFARRYRKLPIVLS 394
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 60/150 (40%), Gaps = 15/150 (10%)
Query: 224 SFKQEEIAKGKQRGEFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVT 283
+F+ +E A+ E + +M PP R +D+E G +I G I ++
Sbjct: 256 AFRNDESARAAIINE------MVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAA 309
Query: 284 HMDDTIFPEPSKFDPSIFENQASIPPYCY--VPFGAGPRICPGYEFARIETLVAIHYIIT 341
+ D +F +P FD + PP + FG GP C G +R E +
Sbjct: 310 NRDPEVFDDPDVFD-------HTRPPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAE 362
Query: 342 HFKWKLLCSDNFFSRNPTSFPSKGLPVQIT 371
++ L + + N + + LP+ ++
Sbjct: 363 RYERIELAEEPTVAHNDFARRYRKLPIVLS 392
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Query: 223 RSFKQEEIAKGKQRGEFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASV 282
R K ++I K K F+ +E + + P + RKAL+D Y + +G I
Sbjct: 343 RDIKIDDIQKLKVMENFI-YESM-RYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGR 400
Query: 283 THMDDTIFPEPSKFDPSIFENQASIPPYCYV-PFGAGPRICPGYEFARIETLVAIHYIIT 341
H + FP+P++F EN A PY Y PFG GPR C G A + + ++
Sbjct: 401 MHRLE-FFPKPNEFT---LENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLR 456
Query: 342 HFKWKLL 348
F K L
Sbjct: 457 RFHVKTL 463
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFD-PSIF 301
E+L + PP+ R A +DI G + IP G ++ + + D FP+P D
Sbjct: 292 EELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA 351
Query: 302 ENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYII 340
E Q V FG G C G AR E + + ++
Sbjct: 352 ERQ--------VGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 9/133 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P+ R D + + G +I + + D+++F +P F I
Sbjct: 271 EEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNF--RIDR 328
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTSFP 362
N P +V FG G C G + AR+E + ++ L D P +F
Sbjct: 329 N-----PNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRLPDLRLADDAPVPLRPANFV 383
Query: 363 S--KGLPVQITPK 373
S + +PV TP
Sbjct: 384 SGPESMPVVFTPS 396
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 8/153 (5%)
Query: 192 QFLGGLQDMIKGAWAVPVNLPFKTRRMNLTIRSFKQEEIAKGKQRGEFLTWEDLAKMFPP 251
+ + LQ M+ ++L +NL+ ++ + G+ + E L P
Sbjct: 231 EIVSTLQLMVAAGHETTISL-IVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPT 289
Query: 252 IFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIF-PEPSKFDPSIFENQASIPPY 310
R A +D+ G VIP G + D+ P +FD +
Sbjct: 290 SHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSGNR----- 344
Query: 311 CYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
++ FG GP +CPG +R+E VA+ + F
Sbjct: 345 -HISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQI-FWVASVTHMDDTIFPEPSKFDPSIF 301
E++ + PP R K E IP + WV S D +P +FDPS
Sbjct: 299 EEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANR-DSDAHDDPDRFDPSRK 357
Query: 302 ENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
A+ + FG G C G AR+E VA+ II F
Sbjct: 358 SGGAA-----QLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQI-FWVASVTHMDDTIFPEPSKFDPSIF 301
E++ + PP R K E IP + WV S D +P +FDPS
Sbjct: 279 EEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANR-DSDAHDDPDRFDPSRK 337
Query: 302 ENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
A+ + FG G C G AR+E VA+ II F
Sbjct: 338 SGGAA-----QLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFEN--- 303
++ PP+ R A + E + I EG + ++++ FP+P F P+ +E
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 304 QASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKL 347
+ + + ++PFGAG C G FA ++ ++ +++++
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFEN--- 303
++ PP+ R A + E + I EG + ++++ FP+P F P+ +E
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 304 QASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKL 347
+ + + ++PFGAG C G FA ++ ++ +++++
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFEN--- 303
++ PP+ R A + E + I EG + ++++ FP+P F P+ +E
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 304 QASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKL 347
+ + + ++PFGAG C G FA ++ ++ +++++
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 247 KMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFEN--- 303
++ PP+ R A + E + I EG + ++++ FP+P F P+ +E
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 304 QASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKL 347
+ + + ++PFGAG C G FA ++ ++ +++++
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 256 FRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPF 315
+R ++ ++ VIP G + V + H FP+P +FD I + A ++ F
Sbjct: 315 YRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD--IRRDTAG-----HLAF 367
Query: 316 GAGPRICPGYEFARIETLVAIHYII 340
G G C G AR+E +A+ ++
Sbjct: 368 GHGIHFCIGAPLARLEARIAVRALL 392
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 256 FRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPF 315
+R ++ ++ VIP G + V + H FP+P +FD I + A ++ F
Sbjct: 315 YRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD--IRRDTAG-----HLAF 367
Query: 316 GAGPRICPGYEFARIETLVAIHYII 340
G G C G AR+E +A+ ++
Sbjct: 368 GHGIHFCIGAPLARLEARIAVRALL 392
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 256 FRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPF 315
+R ++ ++ VIP G + V + H FP+P +FD I + A ++ F
Sbjct: 315 YRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD--IRRDTAG-----HLAF 367
Query: 316 GAGPRICPGYEFARIETLVAIHYII 340
G G C G AR+E +A+ ++
Sbjct: 368 GHGIHFCIGAPLARLEARIAVRALL 392
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E+L ++ P+ G R +D+ G IP G ++ + + D+ ++ P E
Sbjct: 288 EELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDE------RQYGPDAAE 341
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF------KWKLLCSDNFFSR 356
+ P + F G C G AR++ VA+ ++ + +++ S + R
Sbjct: 342 LDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSYVR 401
Query: 357 NPTSFP 362
P S P
Sbjct: 402 RPLSVP 407
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E+L ++ P+ G R +D+ G IP G ++ + + D+ ++ P E
Sbjct: 287 EELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDE------RQYGPDAAE 340
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF------KWKLLCSDNFFSR 356
+ P + F G C G AR++ VA+ ++ + +++ S + R
Sbjct: 341 LDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSYVR 400
Query: 357 NPTSFP 362
P S P
Sbjct: 401 RPLSVP 406
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E+L ++ P+ G R +D+ G IP G ++ + + D+ ++ P E
Sbjct: 287 EELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDE------RQYGPDAAE 340
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF------KWKLLCSDNFFSR 356
+ P + F G C G AR++ VA+ ++ + +++ S + R
Sbjct: 341 LDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSYVR 400
Query: 357 NPTSFP 362
P S P
Sbjct: 401 RPLSVP 406
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P R A +++E G IP+ + + D + FP+P +FD
Sbjct: 278 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD----- 332
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
+ ++ FG G C G A++E VA+ + F
Sbjct: 333 --VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P R A +++E G IP+ + + D FP+P +FD
Sbjct: 278 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD----- 332
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
+ ++ FG G C G A++E VA+ + F
Sbjct: 333 --VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P R A +++E G IP+ + + D FP+P +FD
Sbjct: 279 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD----- 333
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
+ ++ FG G C G A++E VA+ + F
Sbjct: 334 --VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P R A +++E G IP+ + + D FP+P +FD
Sbjct: 279 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD----- 333
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
+ ++ FG G C G A++E VA+ + F
Sbjct: 334 --VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P R A +++E G IP+ + + D FP+P +FD
Sbjct: 278 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD----- 332
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
+ ++ FG G C G A++E VA+ + F
Sbjct: 333 --VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P R A +++E G IP+ + + D FP+P +FD
Sbjct: 279 EEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD----- 333
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
+ ++ FG G C G A++E VA+ + F
Sbjct: 334 --VTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 251 PIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPY 310
P+ R AL D E I G +I + D+ +F P +FD + F N+
Sbjct: 313 PVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPNR------ 366
Query: 311 CYVPFGAGPRICPGYEFARIETLVAIHYIITHFK 344
++ FG G +C G A++E + ++ K
Sbjct: 367 -HLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLK 399
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 254 GGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASI--PPYC 311
G F +D Y IP+G + H D+ + +P F P F + +
Sbjct: 352 GIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEA 411
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
VPF G R C G AR+E + ++ F
Sbjct: 412 LVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 254 GGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASI--PPYC 311
G F +D Y IP+G + H D+ + +P F P F + +
Sbjct: 352 GIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEA 411
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
VPF G R C G AR+E + ++ F
Sbjct: 412 LVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 238 EFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFD 297
EFL ++ P R +D+ Y IP G + + + D PEP + D
Sbjct: 275 EFLRFDSPVSQAP-----IRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD 329
Query: 298 PSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAI 336
AS V FG G C G + AR+E VAI
Sbjct: 330 ---ITRDAS----GGVFFGHGIHFCLGAQLARLEGRVAI 361
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 25/134 (18%)
Query: 243 EDLAKMFPPIFGGF--RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSI 300
E+L + P G R A++D+ I G + + D FP+ + D
Sbjct: 292 EELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR 351
Query: 301 FENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYII------------THFKWKLL 348
NQ ++ FG G C G AR+E VA+ ++ T +W
Sbjct: 352 TPNQ-------HLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW--- 401
Query: 349 CSDNFFSRNPTSFP 362
S+ R P P
Sbjct: 402 -SEGMLLRGPLELP 414
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 25/134 (18%)
Query: 243 EDLAKMFPPIFGGF--RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSI 300
E+L + P G R A++D+ I G + + D FP+ + D
Sbjct: 292 EELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR 351
Query: 301 FENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYII------------THFKWKLL 348
NQ ++ FG G C G AR+E VA+ ++ T +W
Sbjct: 352 TPNQ-------HLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW--- 401
Query: 349 CSDNFFSRNPTSFP 362
S+ R P P
Sbjct: 402 -SEGMLLRGPLELP 414
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 238 EFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFD 297
EFL ++ P R +D+ Y IP G + + + D PEP + D
Sbjct: 275 EFLRFDSPVSQAP-----IRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD 329
Query: 298 PSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAI 336
AS V FG G C G + AR+E VAI
Sbjct: 330 ---ITRDAS----GGVFFGHGIHFCLGAQLARLEGRVAI 361
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R A DIE +I G + V S+ + D T++ +P D +
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSARH-------H 345
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
+ FG G C G AR+E V ++ ++
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 241 TWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSI 300
+E+ + P+ FR +D+E I EG ++ + D + +P ++D I
Sbjct: 287 AFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYD--I 344
Query: 301 FENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSRNPTS 360
+ +V FG+G +C G AR+E V + + + N T
Sbjct: 345 TRKTSG-----HVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGPLKRRFNNTL 399
Query: 361 FPSKGLPVQITP 372
+ LP+Q+TP
Sbjct: 400 RGLESLPIQLTP 411
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R A DIE +I G + V S+ + D T++ +P D +
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSARH-------H 345
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
+ FG G C G AR+E V ++ ++
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R A DIE +I G + V S+ + D T++ +P D +
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSARH-------H 345
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
+ FG G C G AR+E V ++ ++
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP-----PYC 311
R A DI+ G ++ +G + + E + FDP F N SI P
Sbjct: 286 RLATADIQVGDVLVRKGELVL-----------VLLEGANFDPEHFPNPGSIELDRPNPTS 334
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYII 340
++ FG G CPG R + I ++
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 48/134 (35%), Gaps = 25/134 (18%)
Query: 243 EDLAKMFPPIFGGF--RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSI 300
E+L + P G R A++D+ I G + + D FP+ + D
Sbjct: 292 EELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR 351
Query: 301 FENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYII------------THFKWKLL 348
NQ ++ FG G C G AR+E VA+ ++ T +W
Sbjct: 352 TPNQ-------HLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW--- 401
Query: 349 CSDNFFSRNPTSFP 362
S+ R P P
Sbjct: 402 -SEGMLLRGPLELP 414
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 253 FGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCY 312
G R A DIE +I G + V S+ + D T++ +P D +
Sbjct: 293 IAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSARH-------H 345
Query: 313 VPFGAGPRICPGYEFARIETLVAIHYII 340
+ FG G C G AR+E V ++ ++
Sbjct: 346 LAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP-----PYC 311
R A DI+ G ++ +G + + E + FDP F N SI P
Sbjct: 286 RLATADIQVGDVLVRKGELVL-----------VLLEGANFDPEHFPNPGSIELDRPNPTS 334
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYII 340
++ FG G CPG R + I ++
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP-----PYC 311
R A DI+ G ++ +G + + E + FDP F N SI P
Sbjct: 286 RLATADIQVGDVLVRKGELVL-----------VLLEGANFDPEHFPNPGSIELDRPNPTS 334
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYII 340
++ FG G CPG R + I ++
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP-----PYC 311
R A DI+ G ++ +G + + E + FDP F N SI P
Sbjct: 285 RLATADIQVGDVLVRKGELVL-----------VLLEGANFDPEHFPNPGSIELDRPNPTS 333
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYII 340
++ FG G CPG R + I ++
Sbjct: 334 HLAFGRGQHFCPGSALGRRHAQIGIEALL 362
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP-----PYC 311
R A DI+ G ++ +G + + E + FDP F N SI P
Sbjct: 286 RLATADIQVGDVLVRKGELVL-----------VLLEGANFDPEHFPNPGSIELDRPNPTS 334
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYII 340
++ FG G CPG R + I ++
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP-----PYC 311
R A DI+ G ++ +G + + E + FDP F N SI P
Sbjct: 286 RLATADIQVGDVLVRKGELVL-----------VLLEGANFDPEHFPNPGSIELDRPNPTS 334
Query: 312 YVPFGAGPRICPGYEFARIETLVAIHYII 340
++ FG G CPG R + I ++
Sbjct: 335 HLAFGRGQHFCPGSALGRRHAQIGIEALL 363
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 241 TWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSI 300
+E+ + P+ FR +++E G VI EG ++ + D + +P +D I
Sbjct: 285 AFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYD--I 342
Query: 301 FENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCSDNFFSR--NP 358
+ +V FG+G +C G AR+E V + + K + D R N
Sbjct: 343 TRKTSG-----HVGFGSGVHMCVGQLVARLEGEVMLSALAR--KVAAIDIDGPVKRRFNN 395
Query: 359 TSFPSKGLPVQITP 372
T + LPV++TP
Sbjct: 396 TLRGLESLPVKLTP 409
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 11/119 (9%)
Query: 225 FKQEEIAKGKQRGEFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTH 284
++ A+G E L W G R AL+D+E I G ++ +
Sbjct: 270 MRERPGARGTALDELLRWISHRTSV----GLARIALEDVEVHGTRIAAGEPVYVSYLAAN 325
Query: 285 MDDTIFPEPSKFDPSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHF 343
D +FP+P + D P ++ +G G C G AR++T + + ++
Sbjct: 326 RDPDVFPDPDRID-------LDRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 11/116 (9%)
Query: 225 FKQEEIAKGKQRGEFLTWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTH 284
++ A+G E L W G R AL+D+E I G ++ +
Sbjct: 270 MRERPGARGTALDELLRWISHRTSV----GLARIALEDVEVHGTRIAAGEPVYVSYLAAN 325
Query: 285 MDDTIFPEPSKFDPSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYII 340
D +FP+P + D P ++ +G G C G AR++T + + ++
Sbjct: 326 RDPDVFPDPDRID-------LDRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTLL 374
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 256 FRKALKDIEY-GRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVP 314
R A +DIE GR V + I +A H D F +P + D +N +V
Sbjct: 301 LRVAAEDIELSGRTVPADDGVIALLAGANH-DPEQFDDPERVDFHRTDNH-------HVA 352
Query: 315 FGAGPRICPGYEFARIETLVAIHYII 340
FG G C G AR+E VA+ ++
Sbjct: 353 FGYGVHQCVGQHLARLELEVALETLL 378
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 219 NLTIRSFKQEEIAKGKQRGEFLTWEDLAKMF---PPIFGGFRKALK-------------- 261
+L ++ +EE+ +++ E D++KM P + ++ L+
Sbjct: 306 SLNVQEMLREEVLNARRQAE----GDISKMLQMVPLLKASIKETLRLHPISVTLQRYPES 361
Query: 262 DIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPS-IFENQASIPPYCYVPFGAGPR 320
D+ Y+IP + D F P KFDP+ + + + FG G R
Sbjct: 362 DLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLGFGWGVR 421
Query: 321 ICPGYEFARIETLVAIHYIITHFK 344
C G A +E + + +I+ +FK
Sbjct: 422 QCVGRRIAELEMTLFLIHILENFK 445
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A +D+E+G I G + + + + D+ F P +FD A+ P ++ FG
Sbjct: 295 RYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFD-------AARTPNPHLTFG 347
Query: 317 AGPRICPGYEFARIE 331
G C G AR+E
Sbjct: 348 HGIWHCIGAPLARLE 362
>pdb|2K6X|A Chain A, Autoregulation Of A Group 1 Bacterial Sigma Factor
Involves The Formation Of A Region 1.1- Induced
Compacted Structure
Length = 72
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 230 IAKGKQRGEFLTWEDLAKMFPPIFGGFRKAL 260
I+ GK++G ++T+ED+ K FPP F GF L
Sbjct: 15 ISLGKKKG-YITYEDIDKAFPPDFEGFDTNL 44
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 249 FPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP 308
FP + +A +D E+ PEG Q+ ++ D + +P +F P F
Sbjct: 280 FPAVVA---RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE-D 335
Query: 309 PYCYVPFGAGPRI----CPGYEFARIETLVAIHYIITHFKWKLLCSDNF--FSRNPTSFP 362
+ ++P G G CPG VA H ++ ++ + D F+R P + P
Sbjct: 336 SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLP-ALP 394
Query: 363 SKGL 366
G
Sbjct: 395 KSGF 398
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 249 FPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP 308
FP + +A +D E+ PEG Q+ ++ D + +P +F P F
Sbjct: 280 FPAVVA---RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE-D 335
Query: 309 PYCYVPFGAGPRI----CPGYEFARIETLVAIHYIITHFKWKLLCSDNF--FSRNPTSFP 362
+ ++P G G CPG VA H ++ ++ + D F+R P + P
Sbjct: 336 SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLP-ALP 394
Query: 363 SKGL 366
G
Sbjct: 395 KSGF 398
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 249 FPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP 308
FP + +A +D E+ PEG Q+ ++ D + +P +F P F
Sbjct: 280 FPAVVA---RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE-D 335
Query: 309 PYCYVPFGAGPRI----CPGYEFARIETLVAIHYIITHFKWKLLCSDNF--FSRNPTSFP 362
+ ++P G G CPG VA H ++ ++ + D F+R P + P
Sbjct: 336 SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLP-ALP 394
Query: 363 SKGL 366
G
Sbjct: 395 KSGF 398
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 249 FPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP 308
FP + +A +D E+ PEG Q+ ++ D + +P +F P F
Sbjct: 288 FPAVVA---RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE-D 343
Query: 309 PYCYVPFGAGPRI----CPGYEFARIETLVAIHYIITHFKWKLLCSDNF--FSRNPTSFP 362
+ ++P G G CPG VA H ++ ++ + D F+R P + P
Sbjct: 344 SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLP-ALP 402
Query: 363 SKGL 366
G
Sbjct: 403 KSGF 406
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 11/124 (8%)
Query: 249 FPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIP 308
FP + +A +D E+ PEG Q+ ++ D + +P +F P F
Sbjct: 288 FPAVVA---RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE-D 343
Query: 309 PYCYVPFGAGPRI----CPGYEFARIETLVAIHYIITHFKWKLLCSDNF--FSRNPTSFP 362
+ ++P G G CPG VA H ++ ++ + D F+R P + P
Sbjct: 344 SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLP-ALP 402
Query: 363 SKGL 366
G
Sbjct: 403 KSGF 406
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A +D+E G I G + + D +F +P+ D E A ++ FG
Sbjct: 298 RLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLD---VERGAR----HHLAFG 350
Query: 317 AGPRICPGYEFARIE 331
GP C G AR+E
Sbjct: 351 FGPHQCLGQNLARME 365
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 8/115 (6%)
Query: 258 KALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFGA 317
+A +D E+ PEG Q+ ++ D + +P +F P F + ++P G
Sbjct: 294 RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE-DSFNFIPQGG 352
Query: 318 GPRI----CPGYEFARIETLVAIHYIITHFKWKLLCSDNF--FSRNPTSFPSKGL 366
G CPG VA H ++ ++ + D F+R P + P G
Sbjct: 353 GDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLP-ALPKSGF 406
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 224 SFKQEEIAKG-KQRGEFL--------TWEDLAKMFPPIFGGFRKALKDIEYGRYVIPEGW 274
SF E +AK + R E + E+L + F + G R D E+ + +G
Sbjct: 258 SFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADG-RILTSDYEFHGVQLKKGD 316
Query: 275 QIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLV 334
QI ++ +D+ P D F Q + FG G +CPG AR E +V
Sbjct: 317 QILLPQMLSGLDERENAAPMHVD---FSRQK----VSHTTFGHGSHLCPGQHLARREIIV 369
Query: 335 AIHYIIT 341
+ +T
Sbjct: 370 TLKEWLT 376
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E+L + F + R + D+E+ ++ EG I ++ +DD +P D S +
Sbjct: 294 EELFRRFA-VVSDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRRD 352
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAI 336
S F GP C G AR+E V +
Sbjct: 353 VTHST-------FAQGPHRCAGMHLARLEVTVML 379
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A +DIE G I G + ++ + D + P FD A +V FG
Sbjct: 295 RMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD-------ARRNARHHVGFG 347
Query: 317 AGPRICPGYEFARIETLVAI 336
G C G AR E +A+
Sbjct: 348 HGIHQCLGQNLARAELEIAL 367
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A DI+ G ++ +G + + + D FP P SI ++ + P ++ G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPG----SIELDRPN--PTSHLAHG 339
Query: 317 AGPRICPGYEFARIETLVAIHYII 340
G CPG R + I ++
Sbjct: 340 RGQHFCPGSALGRRHAQIGIEALL 363
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIF--PEPSKFDPSI 300
++L + +P + R A+ D++ I +G ++ + + ++D F PE +FD
Sbjct: 272 DELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFD--- 327
Query: 301 FENQASIPPYCYVPFGAGPRICPGYEFARIETLV 334
+ P + G G C G AR+E +V
Sbjct: 328 ----RGLAPIRHTTMGVGAHRCVGAGLARMEVIV 357
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFEN-QASIPPYCYVPF 315
R D+ Y IP G + + +FP P +++P + + + S + +VPF
Sbjct: 358 RVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFHHVPF 417
Query: 316 GAGPRICPG 324
G G R C G
Sbjct: 418 GFGMRQCLG 426
>pdb|1TJF|A Chain A, The Crystal Structure Of The N-Terminal Domain Of Cap
Indicates Variable Oligomerisation
pdb|1TJF|B Chain B, The Crystal Structure Of The N-Terminal Domain Of Cap
Indicates Variable Oligomerisation
Length = 186
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 97 ISNQQTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKP-ESLKKYVGKI 145
+ NQ Q + I +++L+N Q + ++ LL +KP + VGKI
Sbjct: 36 VGNQVEQLVKAIDAEKALINTASQSKKPSQETLLELIKPLNNFAAEVGKI 85
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 14/81 (17%)
Query: 284 HMDDTIFPEPSKFD------------PSIFENQASIPPYCYVPFGAGPRICPGYEFARIE 331
MD I +P F F+N A + Y VP+G +CPG FA
Sbjct: 363 QMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVK-YPSVPWGTEDNLCPGRHFAVHA 421
Query: 332 TLVAIHYIITHFKWKLLCSDN 352
+ I+T F + LC N
Sbjct: 422 IKELVFTILTRFDVE-LCDKN 441
>pdb|1S0P|A Chain A, Structure Of The N-Terminal Domain Of The Adenylyl
Cyclase- Associated Protein (Cap) From Dictyostelium
Discoideum.
pdb|1S0P|B Chain B, Structure Of The N-Terminal Domain Of The Adenylyl
Cyclase- Associated Protein (Cap) From Dictyostelium
Discoideum
Length = 176
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 97 ISNQQTQAITLILGDRSLLNLTGQDHRRVRDALLSFLKP-ESLKKYVGKI 145
+ NQ Q + I +++L+N Q + ++ LL +KP + VGKI
Sbjct: 27 VGNQVEQLVKAIDAEKALINTASQSKKPSQETLLELIKPLNNFAAEVGKI 76
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A+KD+ +I G + + + D+ + P+P D N+A++ V FG
Sbjct: 298 RLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDA----NRAAVSD---VGFG 350
Query: 317 AGPRICPGYEFAR 329
G C G AR
Sbjct: 351 HGIHYCVGAALAR 363
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 7/97 (7%)
Query: 243 EDLAKMFPPIFGGFRKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFE 302
E++ + P R D+ +P G + + D F +P F P
Sbjct: 292 EEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP 351
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYI 339
N+ ++ FG G C G ARIE V + +
Sbjct: 352 NR-------HITFGHGMHHCLGSALARIELSVVLRVL 381
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 292 EPSKFD-PSIFENQASIPPYCYVPFGAGPRICPGYEFARIETLVAIHYIITHFKWKLLCS 350
+P ++D P F+ + P + FGAG R C G AR + A+ + +L C+
Sbjct: 314 DPRRYDRPDDFDIERD--PVPSMSFGAGMRYCLGSYLARTQLRAAVAALARLPGLRLGCA 371
Query: 351 DNFFSRNPTSF--PSKGLPVQITP 372
+ + P + LP+ TP
Sbjct: 372 SDALAYQPRTMFRGLASLPIAFTP 395
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 22 RSSAKGLP----PGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDP-ISKLNLFGKP 76
R+ +K LP PG+ G+PI+G AE++ + R RKY+ + ++N+ P
Sbjct: 19 RTGSKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNM--PP 76
Query: 77 TIFI 80
FI
Sbjct: 77 GAFI 80
>pdb|4E5T|A Chain A, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
pdb|4E5T|B Chain B, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
pdb|4E5T|C Chain C, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
pdb|4E5T|D Chain D, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
pdb|4E5T|E Chain E, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
pdb|4E5T|F Chain F, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
pdb|4E5T|G Chain G, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
pdb|4E5T|H Chain H, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200750) From Labrenzia
Alexandrii Dfl- 11
Length = 404
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 303 NQASIPPYCYVPFGAGPRICPGYEFARI 330
+ A + Y +P G R+C YEF+R+
Sbjct: 250 DMAEVARYTSIPVATGERLCTKYEFSRV 277
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome
P450 74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome
P450 74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome
P450 74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome
P450 74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome
P450 74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid
At 1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome
P450 74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid
At 1.55 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 22 RSSAKGLP----PGSLGIPIIGQSLAFLHAIRSNTAEQWLELRARKYDP-ISKLNLFGKP 76
R+ +K LP PG+ G+PI+G AE++ + R RKY+ + ++N+ P
Sbjct: 19 RTGSKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNM--PP 76
Query: 77 TIFI 80
FI
Sbjct: 77 GAFI 80
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 257 RKALKDIEYGRYVIPEGWQIFWVASVTHMDDTIFPEPSKFDPSIFENQASIPPYCYVPFG 316
R A+ D E G I +G ++ + DD + P +F I + P ++ FG
Sbjct: 317 RTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEF---IIDRPR---PRQHLSFG 370
Query: 317 AGPRICPGYEFARIETLVAIHYIITHF 343
G C G A ++ + I+T F
Sbjct: 371 FGIHRCVGNRLAEMQLRILWEEILTRF 397
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,994,491
Number of Sequences: 62578
Number of extensions: 456410
Number of successful extensions: 1178
Number of sequences better than 100.0: 191
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 928
Number of HSP's gapped (non-prelim): 235
length of query: 376
length of database: 14,973,337
effective HSP length: 100
effective length of query: 276
effective length of database: 8,715,537
effective search space: 2405488212
effective search space used: 2405488212
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)