Query 017155
Match_columns 376
No_of_seqs 238 out of 1811
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:50:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017155.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017155hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rpz_A ADP/ATP-dependent NAD(P 100.0 4.5E-53 1.5E-57 406.1 24.3 268 62-372 8-278 (279)
2 3rss_A Putative uncharacterize 100.0 9.5E-51 3.2E-55 418.2 24.7 279 61-373 221-501 (502)
3 2r3b_A YJEF-related protein; p 100.0 1.9E-50 6.5E-55 393.4 23.3 270 63-374 23-294 (310)
4 3bgk_A SMU.573, putative uncha 100.0 8.7E-51 3E-55 395.9 18.6 271 62-373 36-310 (311)
5 3k5w_A Carbohydrate kinase; 11 100.0 7.7E-45 2.6E-49 371.6 19.8 248 61-368 214-467 (475)
6 3hpd_A Hydroxyethylthiazole ki 100.0 2.2E-30 7.6E-35 246.1 16.1 225 103-367 5-248 (265)
7 1v8a_A Hydroxyethylthiazole ki 100.0 3.3E-30 1.1E-34 245.5 15.8 229 104-371 6-252 (265)
8 3dzv_A 4-methyl-5-(beta-hydrox 100.0 9.6E-30 3.3E-34 243.1 16.3 191 165-369 51-259 (273)
9 3nl6_A Thiamine biosynthetic b 100.0 9.2E-29 3.2E-33 256.5 19.3 236 100-371 251-527 (540)
10 1ekq_A Hydroxyethylthiazole ki 100.0 3.9E-28 1.3E-32 231.8 16.9 229 104-370 8-257 (272)
11 3rm5_A Hydroxymethylpyrimidine 99.9 6.7E-26 2.3E-30 236.1 21.4 231 78-348 15-276 (550)
12 2i5b_A Phosphomethylpyrimidine 99.9 5.2E-24 1.8E-28 201.3 19.9 225 86-350 4-252 (271)
13 1ub0_A THID, phosphomethylpyri 99.9 1.1E-22 3.6E-27 190.8 18.0 218 86-347 2-243 (258)
14 3h74_A Pyridoxal kinase; PSI-I 99.9 5.2E-22 1.8E-26 190.3 20.6 241 85-366 3-271 (282)
15 3mbh_A Putative phosphomethylp 99.9 1E-21 3.5E-26 188.9 17.7 245 85-364 7-278 (291)
16 1jxh_A Phosphomethylpyrimidine 99.9 1.6E-20 5.6E-25 179.5 18.9 219 85-347 25-268 (288)
17 3pzs_A PM kinase, pyridoxamine 99.8 1.1E-18 3.8E-23 167.2 21.2 227 85-348 4-260 (289)
18 3zs7_A Pyridoxal kinase; trans 99.7 8.3E-17 2.8E-21 155.4 20.7 223 85-348 3-262 (300)
19 2ddm_A Pyridoxine kinase; pyri 99.7 4.4E-16 1.5E-20 147.8 19.9 228 86-347 16-266 (283)
20 1rkd_A Ribokinase; carbohydrat 99.4 1.3E-11 4.5E-16 118.0 17.0 151 157-322 119-271 (309)
21 3umo_A 6-phosphofructokinase i 99.3 4.3E-11 1.5E-15 114.3 19.2 183 159-365 114-304 (309)
22 2qhp_A Fructokinase; NP_810670 99.3 1.3E-11 4.5E-16 117.1 15.2 176 168-364 110-294 (296)
23 2yxt_A Pyridoxal kinase; beta 99.3 9E-11 3.1E-15 112.7 18.7 205 86-322 5-252 (312)
24 2jg5_A Fructose 1-phosphate ki 99.3 3.6E-11 1.2E-15 114.6 15.7 151 159-322 109-265 (306)
25 3ry7_A Ribokinase; transferase 99.3 2.2E-11 7.4E-16 116.0 14.1 151 157-322 118-271 (304)
26 3kzh_A Probable sugar kinase; 99.3 1.1E-10 3.7E-15 112.8 18.7 150 158-322 122-273 (328)
27 2fv7_A Ribokinase; structural 99.2 8.5E-11 2.9E-15 113.8 14.6 150 157-322 139-296 (331)
28 2abq_A Fructose 1-phosphate ki 99.2 4.8E-10 1.6E-14 107.0 18.5 153 158-322 108-265 (306)
29 3cqd_A 6-phosphofructokinase i 99.2 7.2E-10 2.5E-14 105.8 18.0 142 168-322 127-272 (309)
30 4e84_A D-beta-D-heptose 7-phos 99.2 9.8E-10 3.3E-14 107.7 19.3 143 163-322 177-322 (352)
31 4e69_A 2-dehydro-3-deoxyglucon 99.2 7.4E-10 2.5E-14 107.3 16.9 142 168-322 141-295 (328)
32 3iq0_A Putative ribokinase II; 99.2 3.9E-10 1.3E-14 109.0 14.8 175 169-368 127-313 (330)
33 2nwh_A AGR_C_3442P, carbohydra 99.2 3.7E-10 1.3E-14 108.6 14.6 149 158-322 118-271 (317)
34 4du5_A PFKB; structural genomi 99.1 3.2E-10 1.1E-14 110.1 13.7 143 169-322 149-301 (336)
35 3ktn_A Carbohydrate kinase, PF 99.1 1.6E-10 5.4E-15 112.3 11.6 151 167-322 124-296 (346)
36 2f02_A Tagatose-6-phosphate ki 99.1 7.4E-10 2.5E-14 106.7 15.7 145 168-322 125-273 (323)
37 3lhx_A Ketodeoxygluconokinase; 99.1 3.3E-10 1.1E-14 108.9 12.5 153 158-322 115-282 (319)
38 1vm7_A Ribokinase; TM0960, str 99.1 1.4E-09 4.7E-14 104.5 16.3 144 158-322 128-274 (311)
39 4e3a_A Sugar kinase protein; s 99.1 5.1E-10 1.7E-14 109.6 12.9 172 168-363 167-347 (352)
40 3ljs_A Fructokinase; fructokia 99.1 3.7E-10 1.3E-14 109.4 11.5 140 169-314 126-273 (338)
41 2jg1_A Tagatose-6-phosphate ki 99.1 1.1E-09 3.7E-14 106.1 14.7 145 168-322 143-290 (330)
42 2rbc_A Sugar kinase, AGR_C_456 99.1 5.6E-09 1.9E-13 101.8 18.8 133 169-322 154-292 (343)
43 3vas_A Putative adenosine kina 99.1 6.5E-10 2.2E-14 109.6 12.0 146 167-322 173-336 (370)
44 2afb_A 2-keto-3-deoxygluconate 99.1 4.9E-10 1.7E-14 109.1 10.8 152 168-322 134-308 (351)
45 3ie7_A LIN2199 protein; phosph 99.1 6.2E-10 2.1E-14 106.9 11.1 141 166-322 127-269 (320)
46 2qcv_A Putative 5-dehydro-2-de 99.0 3.7E-09 1.3E-13 101.8 16.2 146 169-322 135-289 (332)
47 3kd6_A Carbohydrate kinase, PF 99.0 6.1E-09 2.1E-13 99.9 15.7 177 168-371 115-301 (313)
48 3otx_A Adenosine kinase, putat 99.0 2.8E-09 9.4E-14 103.6 12.8 145 167-322 157-317 (347)
49 1bx4_A Protein (adenosine kina 99.0 2.7E-09 9.3E-14 103.5 12.6 144 166-322 155-316 (345)
50 2ajr_A Sugar kinase, PFKB fami 99.0 2.7E-09 9.2E-14 103.2 11.2 144 167-322 141-290 (331)
51 3loo_A Anopheles gambiae adeno 99.0 5.5E-09 1.9E-13 102.6 13.4 147 166-322 170-333 (365)
52 3pl2_A Sugar kinase, ribokinas 98.9 1.6E-08 5.6E-13 96.8 16.1 142 169-322 132-281 (319)
53 3hj6_A Fructokinase, FRK; fruc 98.9 1.7E-09 5.9E-14 104.3 8.2 144 168-322 140-291 (327)
54 1tyy_A Putative sugar kinase; 98.9 2.6E-09 8.8E-14 103.9 9.4 138 169-314 138-283 (339)
55 3ikh_A Carbohydrate kinase; tr 98.9 1.8E-08 6.3E-13 95.9 14.3 133 157-322 116-251 (299)
56 2pkf_A Adenosine kinase; trans 98.9 6.9E-08 2.4E-12 93.5 18.0 177 159-368 135-320 (334)
57 3h49_A Ribokinase; transferase 98.8 4.8E-08 1.6E-12 94.1 15.1 140 169-322 132-278 (325)
58 2abs_A Adenosine kinase, AK; r 98.8 2.1E-08 7.3E-13 98.9 12.5 146 167-322 175-354 (383)
59 2c4e_A Sugar kinase MJ0406; tr 98.8 4.3E-08 1.5E-12 93.3 13.5 129 171-322 129-263 (302)
60 1v1a_A 2-keto-3-deoxygluconate 98.8 4.9E-08 1.7E-12 93.1 13.7 136 169-322 122-267 (309)
61 2v78_A Fructokinase; transfera 98.7 8.9E-08 3.1E-12 91.5 13.8 138 169-322 125-274 (313)
62 2dcn_A Hypothetical fructokina 98.7 7.5E-08 2.6E-12 91.8 12.7 138 169-322 125-272 (311)
63 1vk4_A PFKB carbohydrate kinas 98.7 6.5E-08 2.2E-12 92.1 11.3 132 171-322 118-263 (298)
64 3b1n_A Ribokinase, putative; r 98.6 3.8E-07 1.3E-11 88.0 14.7 164 171-368 134-306 (326)
65 3go6_A Ribokinase RBSK; phosph 98.6 1.7E-07 5.7E-12 90.0 11.7 119 167-314 138-259 (310)
66 4gm6_A PFKB family carbohydrat 98.6 2.5E-07 8.4E-12 89.8 12.7 179 168-366 146-343 (351)
67 3uq6_A Adenosine kinase, putat 98.5 4.4E-07 1.5E-11 89.2 12.4 146 166-322 174-338 (372)
68 2hlz_A Ketohexokinase; non-pro 98.5 1.7E-06 5.7E-11 82.8 14.0 131 170-322 144-288 (312)
69 3ewm_A Uncharacterized sugar k 98.4 3.2E-06 1.1E-10 80.6 13.7 166 169-366 121-299 (313)
70 3bf5_A Ribokinase related prot 98.3 2.6E-06 8.9E-11 81.4 10.2 120 171-322 139-262 (306)
71 3sbx_A Putative uncharacterize 70.7 53 0.0018 28.8 11.7 101 86-213 44-149 (189)
72 3qua_A Putative uncharacterize 68.3 59 0.002 28.7 11.6 101 86-213 53-158 (199)
73 3e48_A Putative nucleoside-dip 58.5 70 0.0024 28.5 10.5 45 164-208 57-102 (289)
74 1jw9_B Molybdopterin biosynthe 57.2 48 0.0016 29.9 9.1 34 86-123 32-65 (249)
75 1t35_A Hypothetical protein YV 53.8 81 0.0028 27.4 9.7 35 86-123 33-67 (191)
76 3hl2_A O-phosphoseryl-tRNA(SEC 50.9 14 0.00049 37.4 4.7 159 23-211 80-254 (501)
77 3rcm_A TATD family hydrolase; 49.7 19 0.00065 33.6 5.2 51 161-211 78-135 (287)
78 2iz6_A Molybdenum cofactor car 45.9 1.4E+02 0.0049 25.5 11.2 121 86-242 45-168 (176)
79 4fxs_A Inosine-5'-monophosphat 44.7 50 0.0017 33.2 7.7 117 78-212 210-343 (496)
80 3gh1_A Predicted nucleotide-bi 40.4 2.3E+02 0.0078 28.3 11.3 14 229-242 315-328 (462)
81 4avf_A Inosine-5'-monophosphat 40.2 1.5E+02 0.0052 29.5 10.4 117 78-212 208-341 (490)
82 1zud_1 Adenylyltransferase THI 40.2 98 0.0034 27.8 8.3 33 86-122 29-61 (251)
83 4af0_A Inosine-5'-monophosphat 35.3 1.1E+02 0.0038 31.4 8.4 116 78-211 259-392 (556)
84 3ipw_A Hydrolase TATD family p 34.8 38 0.0013 32.2 4.7 51 162-212 116-177 (325)
85 1xwy_A DNAse TATD, deoxyribonu 34.5 50 0.0017 29.3 5.3 50 162-211 77-133 (264)
86 2y5s_A DHPS, dihydropteroate s 32.1 81 0.0028 29.6 6.4 26 186-211 167-195 (294)
87 3usb_A Inosine-5'-monophosphat 31.0 3E+02 0.01 27.5 10.9 114 79-212 236-368 (511)
88 3h8v_A Ubiquitin-like modifier 30.1 2.4E+02 0.0082 26.1 9.4 36 84-123 35-70 (292)
89 3guw_A Uncharacterized protein 29.2 29 0.00098 31.8 2.7 44 168-211 86-131 (261)
90 3e2v_A 3'-5'-exonuclease; stru 29.0 59 0.002 31.9 5.1 51 162-212 137-205 (401)
91 3bc8_A O-phosphoseryl-tRNA(SEC 28.5 63 0.0021 32.2 5.2 20 192-211 217-236 (450)
92 1ydh_A AT5G11950; structural g 27.1 3.3E+02 0.011 24.0 10.9 34 86-122 41-74 (216)
93 1y8q_A Ubiquitin-like 1 activa 26.3 1.2E+02 0.004 28.8 6.6 31 86-120 37-67 (346)
94 3bq9_A Predicted rossmann fold 26.1 4.4E+02 0.015 26.2 10.8 14 229-242 313-326 (460)
95 3gg7_A Uncharacterized metallo 24.8 59 0.002 29.6 4.0 50 161-212 69-127 (254)
96 1zzm_A Putative deoxyribonucle 24.6 81 0.0028 27.8 4.9 50 162-211 77-135 (259)
97 2zcu_A Uncharacterized oxidore 24.1 1.2E+02 0.004 26.7 5.9 41 164-205 57-97 (286)
98 4b79_A PA4098, probable short- 22.7 3.4E+02 0.012 24.3 8.7 81 85-184 10-90 (242)
99 3e8x_A Putative NAD-dependent 22.2 2.7E+02 0.0091 23.7 7.8 18 167-184 79-96 (236)
100 3r6d_A NAD-dependent epimerase 22.0 3.5E+02 0.012 22.6 9.5 43 164-211 65-107 (221)
101 2jl1_A Triphenylmethane reduct 21.7 2.1E+02 0.0071 25.1 7.1 45 164-208 58-103 (287)
102 2xio_A Putative deoxyribonucle 21.5 62 0.0021 29.7 3.5 50 162-211 89-148 (301)
103 3q3v_A Phosphoglycerate kinase 21.0 68 0.0023 31.6 3.7 49 163-211 209-272 (403)
104 3rui_A Ubiquitin-like modifier 20.9 2.6E+02 0.009 26.6 7.9 36 82-121 31-66 (340)
105 1j6o_A TATD-related deoxyribon 20.4 1.2E+02 0.0041 27.0 5.2 50 162-211 85-141 (268)
106 3h2s_A Putative NADH-flavin re 20.4 3.7E+02 0.013 22.3 8.8 42 169-210 59-104 (224)
107 3k5i_A Phosphoribosyl-aminoimi 20.3 4.6E+02 0.016 24.9 9.7 31 85-119 24-54 (403)
108 1pjq_A CYSG, siroheme synthase 20.3 2.2E+02 0.0075 27.9 7.4 34 86-124 13-46 (457)
109 2a33_A Hypothetical protein; s 20.0 4.5E+02 0.015 23.1 12.0 36 86-124 45-80 (215)
No 1
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=100.00 E-value=4.5e-53 Score=406.06 Aligned_cols=268 Identities=21% Similarity=0.306 Sum_probs=222.8
Q ss_pred cCChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcccccccCCceeeeccc
Q 017155 62 EADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPIL 141 (376)
Q Consensus 62 ~~~~~~~~~~~lp~r~~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~ 141 (376)
.++.++ ++..+|+|++++|||++|+|+|||||.+|+||++||+.+|+|+|+|+||+++|++....+..+.||+|+.+-
T Consensus 8 ~~~~~~-~~~~lp~r~~~~hKg~~G~vlvigGs~~~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~~~~~~Pe~m~~~~- 85 (279)
T 3rpz_A 8 FWTEEH-VRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRD- 85 (279)
T ss_dssp BCCHHH-HHHHCCCCCSSCCGGGGCEEEEECCBTTBCHHHHHHHHHHHTTTCSEEEEEECTTTHHHHTTTCTTCEEEET-
T ss_pred cCCHHH-HHhhCCCCCCcCCCcCCCEEEEEeCCCCCCcHHHHHHHHHHHhCCCeEEEEecHHHHHHHHhcCCeeEEccc-
Confidence 345444 678899999999999999999999999999999999999999999999999999999999999999998521
Q ss_pred ccccccCCCchhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchh
Q 017155 142 EESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSID 221 (376)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ 221 (376)
. .++ ....++++++|+++||||++++++..+++..++ +.+.|+|||+|++++ .
T Consensus 86 -~-------------~~~----~~~~~~l~~~davviGPGlg~~~~~~~~~~~~l----~~~~p~VlDAdal~~-~---- 138 (279)
T 3rpz_A 86 -G-------------WKK----AADAQLEETYRAIAIGPGLPQTESVQQAVDHVL----TADCPVILDAGALAK-R---- 138 (279)
T ss_dssp -H-------------HHH----TTTSCCSSCCSEEEECTTCCCCHHHHHHHHHHT----TSSSCEEECGGGCCS-C----
T ss_pred -c-------------ccc----hhhHhhccCCCEEEECCCCCCCHHHHHHHHHHH----hhCCCEEEECCccch-h----
Confidence 0 000 012234678999999999999887666555544 467899999999987 2
Q ss_pred hhcc-CCCeeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCC-CCC
Q 017155 222 LVSG-YPLAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RCG 299 (376)
Q Consensus 222 ll~~-~~~~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~-~t~ 299 (376)
.+.. .+++|||||.+|+++|+|.+... .++|+.+++++++++++ ++|++||.+|+|+++++.++++..|++. .++
T Consensus 139 ~l~~~~~~~vlTPN~~E~~~L~g~~~~~--~~~d~~~aa~~la~~~~-~~VvlKG~~~vi~~~~g~~~~~~~g~~~~at~ 215 (279)
T 3rpz_A 139 TYPKREGPVILTPHPGEFFRMTGVPVNE--LQKKRAEYAKEWAAQLQ-TVIVLKGNQTVIAFPDGDCWLNPTGNGALAKG 215 (279)
T ss_dssp CCCCCSSCEEECCCHHHHHHHHCCCHHH--HTTSHHHHHHHHHHHHT-SEEEECSTTCEEECTTSCEEECCCCCGGGCST
T ss_pred hhhhccCCEEEecCHHHHHHHhCCCccc--hHHHHHHHHHHHHHHcC-eEEEEeCCCcEEECCCceEEEeCCCCCCCCCC
Confidence 1222 34899999999999999875321 12578899999999987 5788999999999887555677778876 599
Q ss_pred CchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHhh
Q 017155 300 GQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKK-RSTLTTDIIECLGRSLEDI 372 (376)
Q Consensus 300 GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~-~~~~a~dii~~l~~~~~~l 372 (376)
||||+|+|+|++|++ +|.++ .+|+..|+|+|+.||+.+.++.+ ++++|+||++.||++|+++
T Consensus 216 GtGD~Lag~iaa~lA---~g~~~--------~~A~~~a~~lh~~Ag~~a~~~~g~~~~~a~dl~~~lp~~~~~~ 278 (279)
T 3rpz_A 216 GTGDTLTGMILGMLC---CHEDP--------KHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRF 278 (279)
T ss_dssp THHHHHHHHHHHHHH---HCSSH--------HHHHHHHHHHHHHHHHHHHHHSCTTSCCHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHH---CCCCH--------HHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHc
Confidence 999999999999999 88765 57888899999999999988765 8999999999999999986
No 2
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=100.00 E-value=9.5e-51 Score=418.16 Aligned_cols=279 Identities=28% Similarity=0.440 Sum_probs=236.5
Q ss_pred ccCChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcccccccCCceeeecc
Q 017155 61 FEADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPI 140 (376)
Q Consensus 61 ~~~~~~~~~~~~lp~r~~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~~~pe~~~~~~ 140 (376)
+.+++++ ++.++|+|++++|||++|+|+|||||.+|+||++||+.+|+|+|+|+||+++|++...++..+.||+|++++
T Consensus 221 ~~~~~~~-~~~~lp~r~~~~hKg~~G~vlvigGs~~~~GA~~Laa~aAlr~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~ 299 (502)
T 3rss_A 221 YVITREM-VRSLLPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPI 299 (502)
T ss_dssp EECCHHH-HHHHSCCCCSSCCGGGGCEEEEECCCSSCCSHHHHHHHHHHHTTCSEEEEEEETTTHHHHHHHCTTSEEEEE
T ss_pred hhcCHHH-HHHhcCCCCCCCCCCCCceEEEEECCCCCCCHHHHHHHHHHHhCcCeEEEEEcHHHHHHHhhcCCeEEEecc
Confidence 3455555 678899999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCchhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccch
Q 017155 141 LEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI 220 (376)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~ 220 (376)
+++ .+.++.++++++.++++++|+++||||++++++..+.+..+++ +.++|+|||||+++++. .
T Consensus 300 ~~~-----------~~~~~~~~~~~~~~~~~~~davviGpGlg~~~~~~~~~~~~l~---~~~~pvVlDadgl~~l~--~ 363 (502)
T 3rss_A 300 DTE-----------KGFFSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFLK---TLEKPAVIDADAINVLD--T 363 (502)
T ss_dssp CCS-----------SSSCCGGGHHHHHHHHTTCSEEEECTTCCCSHHHHHHHHHHHH---HCCSCEEECHHHHHTCC--H
T ss_pred ccc-----------ccccchhhHHHHHHHhccCCEEEEeCCCCCCHHHHHHHHHHHH---hcCCCEEEeCcccchhc--H
Confidence 532 1234555677888888999999999999999877777766654 46899999999998876 4
Q ss_pred hhhccC-CCeeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCC-CC
Q 017155 221 DLVSGY-PLAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RC 298 (376)
Q Consensus 221 ~ll~~~-~~~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~-~t 298 (376)
++++.+ +++|||||.+|+++|+|.+.. + .+++ .+++++++++++ ++|++||.+|+|++++..+ ++..|++. .+
T Consensus 364 ~ll~~~~~~~vlTPN~~E~~~L~g~~~~-~-~~~d-~~aa~~la~~~~-~~VvlKG~~~vi~~~~~~~-~~~~g~~~~at 438 (502)
T 3rss_A 364 SVLKERKSPAVLTPHPGEMARLVKKTVG-D-VKYN-YELAEEFAKEND-CVLVLKSATTIVTDGEKTL-FNITGNTGLSK 438 (502)
T ss_dssp HHHHHCSSCEEECCCHHHHHHHHTCCHH-H-HTTC-HHHHHHHHHHHT-SEEEECSSSEEEECSSCEE-EECCCCGGGSS
T ss_pred HHHhccCCCEEEeCCHHHHHHHhCCCcc-c-hHHH-HHHHHHHHHHcC-CEEEEeCCCeEEEcCCEEE-EECCCCCcccc
Confidence 455443 389999999999999987532 1 1246 889999999987 5788999999999888554 66678876 59
Q ss_pred CCchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHhhc
Q 017155 299 GGQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKKRSTLTTDIIECLGRSLEDIC 373 (376)
Q Consensus 299 ~GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~~~~a~dii~~l~~~~~~l~ 373 (376)
+||||+|+|+|++++| +|.++ ..|+..|+|+|+.||+.+++ .+++++|+||++.||++|+++.
T Consensus 439 ~GsGD~Lag~iaa~lA---~g~~~--------~~Aa~~A~~~hg~Ag~~aa~-g~~~~~a~dl~~~lp~~~~~l~ 501 (502)
T 3rss_A 439 GGSGDVLTGMIAGFIA---QGLSP--------LEASTVSVYLHGFAAELFEQ-DERGLTASELLRLIPEAIRRLK 501 (502)
T ss_dssp TTHHHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHHHHTCSS-CGGGCCHHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHh---CCCCH--------HHHHHHHHHHHHHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHh
Confidence 9999999999999999 88765 58888999999999999887 6689999999999999999874
No 3
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=100.00 E-value=1.9e-50 Score=393.38 Aligned_cols=270 Identities=22% Similarity=0.306 Sum_probs=223.0
Q ss_pred CChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcccccccCCceeeecccc
Q 017155 63 ADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILE 142 (376)
Q Consensus 63 ~~~~~~~~~~lp~r~~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~~ 142 (376)
++.+ .++.++|+|++++|||++|+||+||||++|+||++|||++|+++|+|+||++|+++....+....||+|+.++.+
T Consensus 23 ~~~~-~~~~~lp~r~~~~hKg~~G~vlvIaGsd~~~GA~ilA~~aal~~Gaglvt~~t~~~~~~~v~~~~pe~~~~~~~~ 101 (310)
T 2r3b_A 23 LSKD-ILEEVITQRPSDSYKSNFGRVVLIGGNRQYGGAIIMSTEACINSGAGLTTVITDVKNHGPLHARCPEAMVVGFEE 101 (310)
T ss_dssp CCHH-HHHHHCBCCCTTCCGGGGCEEEEECCCSSSHHHHHHHHHHHHHHTCSEEEEECCGGGHHHHHHHCTTCEEECTTC
T ss_pred cCHH-HHHhhCCCCCCCCCCCcCCEEEEEECCCCCCcHHHHHHHHHHHhCcCcEEEEEChhhHhHHhhCChhheEecCCc
Confidence 4444 467789999999999999999999999999999999999999999999999999999888999999999987531
Q ss_pred cccccCCCchhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhh
Q 017155 143 ESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDL 222 (376)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~l 222 (376)
.+++.++++++|+++||||++++++..+.+.++++.++ .++|+|||||++.++..+.++
T Consensus 102 --------------------~~ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~~ 160 (310)
T 2r3b_A 102 --------------------TVLLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQGNFS 160 (310)
T ss_dssp --------------------HHHHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHTTCC
T ss_pred --------------------HHHHHHHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccchhh
Confidence 13455566789999999999998888899999887654 578999999999887754444
Q ss_pred hccCCCeeEcCCHHHHHHHhcccccCCCCCCcH-HHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCC-CCCC
Q 017155 223 VSGYPLAVLTPNVNEYKRLVQKVLNCEVNDRDA-PELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RCGG 300 (376)
Q Consensus 223 l~~~~~~vITPN~~E~~~L~g~~~~~~v~~~d~-~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~-~t~G 300 (376)
++...++|||||.+|+++|+|.+.. ++ +.++ .++++++ + ++|++||++++|++++.. +++..+++. +++|
T Consensus 161 l~~~~~~viTPN~~E~~~L~g~~~~-~~-~~~~a~~aA~~l----g-~~VvlKG~~~vi~~~~~~-~~~~~g~~~~~t~G 232 (310)
T 2r3b_A 161 LTYPEKVVFTPHQMEWQRLSHLPIE-QQ-TLANNQRQQAKL----G-STIVLKSHRTTIFHAGEP-FQNTGGNPGMATGG 232 (310)
T ss_dssp CSSGGGEEEECCHHHHHHHHCCCGG-GC-CHHHHHHHHHHH----T-SEEEECSTTCEEECSSSC-EECCCCCGGGCSTT
T ss_pred hcCCCCEEEcCCHHHHHHHhCCCCC-cc-cchHHHHHHHHh----C-cEEEEeCCceEEEECCEE-EEECCCCCCCCCCC
Confidence 4322378999999999999987542 11 1134 4445544 5 578999999999984434 466667765 5999
Q ss_pred chHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHhhcc
Q 017155 301 QGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKKRSTLTTDIIECLGRSLEDICP 374 (376)
Q Consensus 301 sGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~~~~a~dii~~l~~~~~~l~~ 374 (376)
|||+|+|+|++++| +|+++ .+|+..|+|+|+.++++++++ +++++++||+|.||++|+++..
T Consensus 233 tGD~Lag~Iaa~lA---~g~~~--------~eA~~~A~~~~~~ag~~a~~~-g~~~~a~dl~~~l~~~~~~~~~ 294 (310)
T 2r3b_A 233 TGDTLAGIIAGFLA---QFKPT--------IETIAGAVYLHSLIGDDLAKT-DYVVLPTKISQALPTYMKKYAQ 294 (310)
T ss_dssp HHHHHHHHHHHHHH---HSCSS--------HHHHHHHHHHHHHHHHHHTTT-CSSCCHHHHHHHHHHHHHHHSB
T ss_pred hHHHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHHHHHHHHhh-CCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999 88876 578888999999999999877 7999999999999999998753
No 4
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=100.00 E-value=8.7e-51 Score=395.91 Aligned_cols=271 Identities=24% Similarity=0.336 Sum_probs=225.6
Q ss_pred cCChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcccccccCCceeeeccc
Q 017155 62 EADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPIL 141 (376)
Q Consensus 62 ~~~~~~~~~~~lp~r~~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~ 141 (376)
.++.++ ++.++|+|++++|||++|+||+|||||+|+||++|||++|+++|+|+||++|+|+....+....||+|+.++.
T Consensus 36 ~~~~~~-~~~~lp~r~~~~hKg~~G~vlvIaGsd~~~GAgilA~~aal~~Gaglvt~~t~q~~~~~v~~~~pe~~~~~~~ 114 (311)
T 3bgk_A 36 IIDDLL-TKKIIKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNSGAGLVTVATHKDNITALHSHLPEAMAFDMV 114 (311)
T ss_dssp EECHHH-HHHHSCCCCSSCCSSTTCEEEEECCCTTCHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHHCTTSEEEETT
T ss_pred ccCHHH-HHhhCCCCCCCCCCccCCEEEEEECCCCCCCHHHHHHHHHHHhCcCeEEEEEChhhHhHHhhCChhHheeccc
Confidence 445444 5778999999999999999999999999999999999999999999999999999988889999999998753
Q ss_pred ccccccCCCchhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchh
Q 017155 142 EESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSID 221 (376)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ 221 (376)
+ .+++.++++++|+++||||++++++..+.+.++++.++ .++|+|||||++.++..+.+
T Consensus 115 ~--------------------~~ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~~~ 173 (311)
T 3bgk_A 115 E--------------------KDRLSEQITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKRKP 173 (311)
T ss_dssp C--------------------HHHHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHCC-
T ss_pred c--------------------HHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccChh
Confidence 1 13455566789999999999998888899999987654 57899999999988775443
Q ss_pred h-hccCCCeeEcCCHHHHHHHhcccccCCCCCCcH-HHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCC-CC
Q 017155 222 L-VSGYPLAVLTPNVNEYKRLVQKVLNCEVNDRDA-PELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR-RC 298 (376)
Q Consensus 222 l-l~~~~~~vITPN~~E~~~L~g~~~~~~v~~~d~-~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~-~t 298 (376)
+ ++ ..++|||||..|+++|+|.+.. + .++++ .++++++++ + ++|++||.++++++++.. +++..+++. ++
T Consensus 174 l~L~-~~~~viTPN~~E~~~L~g~~~~-~-~~~d~~~~aa~~l~~--g-~~VvlkG~~~~i~~~~~~-~~~~~~~~~~~t 246 (311)
T 3bgk_A 174 AIWP-TKQIILTPHQKEWERLSGLTIP-E-QIEAATQTALAHFPK--E-TILVAKSHQTKIYQGQKI-GHIQVGGPYQAT 246 (311)
T ss_dssp CCCS-CSCEEEECCSCC-CTTTCCCST-T-CCHHHHHHHHTTSCT--T-CEEEECSSSCEEEETTEE-EEECCCCGGGCS
T ss_pred hcCC-CCCEEECCcHHHHHHHhCCCCC-c-chhhHHHHHHHHHhc--C-CEEEEeCCCeEEEECCEE-EEECCCCCCCCC
Confidence 3 32 3479999999999999987532 1 11356 778888876 5 678899999999984444 466667665 59
Q ss_pred CCchHHHHHHHHHHHhhhhc-cCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHhhc
Q 017155 299 GGQGDILSGSVAVFLSWARA-KGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKKRSTLTTDIIECLGRSLEDIC 373 (376)
Q Consensus 299 ~GsGDvLaG~Iaa~LA~~~~-g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~~~~a~dii~~l~~~~~~l~ 373 (376)
+|+||+|+|+|++++| + |+++ .+|+..|+|+|+.++++++++ +++++++||+|.||++|++++
T Consensus 247 ~GtGD~Lag~iaa~lA---~~g~~~--------~eA~~~A~~~~~~ag~~a~~~-g~~~~a~dl~~~l~~~~~~~~ 310 (311)
T 3bgk_A 247 GGMGDTLAGMIAGFVA---QFHTDR--------FEVAAAAVFLHSYIADQLSKE-AYVVLPTRISAEITRVMKEMS 310 (311)
T ss_dssp TTHHHHHHHHHHHHHH---HCCSCH--------HHHHHHHHHHHHHHHHHHHTT-CSSCCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHH---ccCCCH--------HHHHHHHHHHHHHHHHHHHhh-CCCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999 8 8775 578888999999999999877 799999999999999999875
No 5
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=100.00 E-value=7.7e-45 Score=371.56 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=196.6
Q ss_pred ccCChhhHHHhhCCCC-CCCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcccccccCCceeeec
Q 017155 61 FEADAENVMREITPVL-DPSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHP 139 (376)
Q Consensus 61 ~~~~~~~~~~~~lp~r-~~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~~~pe~~~~~ 139 (376)
+.++.+++ .+|+| ++++|||++|+|+||||| |+||++||+.+|+|+|+|+||+++|++.... ..++||+|+++
T Consensus 214 ~~~~~~~~---~lp~r~~~~~hKg~~G~vlvigGs--~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~-~~~~pe~m~~~ 287 (475)
T 3k5w_A 214 FLLEKSDL---KLPLRDKKNAHKGDYGHAHVLLGK--HSGAGLLSALSALSFGSGVVSVQALECEITS-NNKPLELVFCE 287 (475)
T ss_dssp EECCGGGC---CCCCCCCSSCCGGGGCEEEEEECS--SHHHHHHHHHHHHHTTCSEEEEEESSSCCSS-SSSCTTSEEES
T ss_pred eecCHHHh---cccCCCCCCCCCCCCCeEEEEeCC--CCcHHHHHHHHHHHhCCCeEEEeccHHHhhc-ccCChhheeeh
Confidence 34555553 37777 799999999999999999 9999999999999999999999999983222 45678999864
Q ss_pred ccccccccCCCchhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc
Q 017155 140 ILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS 219 (376)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~ 219 (376)
. +.+++|+++|||||++++. + +.++++ .+ |+|||+|+++...
T Consensus 288 ~----------------------------~~~~~~a~~iGPGlG~~~~--~-l~~~l~----~~-p~VlDADaL~~~~-- 329 (475)
T 3k5w_A 288 N----------------------------FPNLLSAFALGMGLENIPK--D-FNRWLE----LA-PCVLDAGVFYHKE-- 329 (475)
T ss_dssp S----------------------------CCSSCSEEEECTTCSSCCT--T-HHHHHH----HS-CEEEEGGGGGSGG--
T ss_pred h----------------------------hccCCCEEEEcCCCCCCHH--H-HHHHHh----cC-CEEEECcccCCch--
Confidence 2 1357899999999998854 4 666664 24 9999999997532
Q ss_pred hhhhccC-CCeeEcCCHHHHHHHhcccc-cCCCC--CCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCC
Q 017155 220 IDLVSGY-PLAVLTPNVNEYKRLVQKVL-NCEVN--DRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSP 295 (376)
Q Consensus 220 ~~ll~~~-~~~vITPN~~E~~~L~g~~~-~~~v~--~~d~~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~ 295 (376)
+++.. +++|||||.+|+++|+|... +.++. ..|+.++++++++++++++|++||.+|+|++++..+ ++.+|++
T Consensus 330 --~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~~vI~~~~~~~-~~~~g~~ 406 (475)
T 3k5w_A 330 --ILQALEKEAVLTPHPKEFLSLLNLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVF-INILGSV 406 (475)
T ss_dssp --GGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSSEEEEETTEEE-EECCCCG
T ss_pred --hhhccCCCEEECCCHHHHHHHhCCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCCCEEECCCEEE-EECCCCC
Confidence 22222 36999999999999998610 00112 246778899999998337899999999999876654 6778888
Q ss_pred CC-CCCchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHH
Q 017155 296 RR-CGGQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKKRSTLTTDIIECLGRS 368 (376)
Q Consensus 296 ~~-t~GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~~~~a~dii~~l~~~ 368 (376)
.+ ++||||+|||+|++|+| ||.++ +.|+..|+|+|+.||+.+ +.+++++|+||+++||++
T Consensus 407 ~mat~GtGdvLsg~Iaa~lA---~g~~~--------~~Aa~~a~~lhg~ag~~a--~~~~~~~a~dl~~~l~~~ 467 (475)
T 3k5w_A 407 ALAKAGSGDVLAGLILSLLS---QNYTP--------LDAAINASLAHALASLEF--KNNYALTPLDLIEKIKQL 467 (475)
T ss_dssp GGCSTTHHHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHGGGGC--SSTTCCCHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHHHHHHh--ccCCCcCHHHHHHHhhhh
Confidence 74 99999999999999999 88765 578888999999999998 456899999999999974
No 6
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.97 E-value=2.2e-30 Score=246.11 Aligned_cols=225 Identities=18% Similarity=0.244 Sum_probs=176.1
Q ss_pred HHHHHHHhcccCeeEEecccCCccc----c--cccCCceeeecccccccccCCCchhhhhhhhhhhHHHHHHhhccCCEE
Q 017155 103 FAAISALKIGADLSHVFCTKDAAPV----I--KSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCL 176 (376)
Q Consensus 103 lAa~aAlr~Gaglvt~~t~~~~~~~----i--~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~dav 176 (376)
.-++..+|.-..||+++|..-+.+. + ...+| +|.+.. +++.++.+.+|++
T Consensus 5 ~~~l~~vr~~~PLvh~iTN~V~~n~~AN~lLA~GasP-iMa~~~-----------------------~E~~e~~~~a~al 60 (265)
T 3hpd_A 5 IEALKRVRERRPLVHNITNFVVMNTTANALLALGASP-VMAHAE-----------------------EELEEMIRLADAV 60 (265)
T ss_dssp HHHHHHHHHHCCEEEEECCTTTHHHHHHHHHHHTCEE-EECCCT-----------------------TTHHHHHHHCSEE
T ss_pred HHHHHHHHhcCCcEEeccchhhHHHHHHHHHHhCCch-hhcCCH-----------------------HHHHHHHHHCCeE
Confidence 3467788889999999997655443 2 12344 665431 2345556679999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccch----hhhccCCCeeEcCCHHHHHHHhccccc---CC
Q 017155 177 VVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKVLN---CE 249 (376)
Q Consensus 177 vIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~----~ll~~~~~~vITPN~~E~~~L~g~~~~---~~ 249 (376)
+||+|++++ +..+.+....+.+++.++|+||||||+.....+. +++.. +++|||||.+|+.+|+|.... .+
T Consensus 61 ~iNiGtl~~-~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~-~~~vIrgN~sEi~~L~g~~~~~~gvd 138 (265)
T 3hpd_A 61 VINIGTLDS-GWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSR-GVDVLKGNFGEISALLGEEGKTRGVD 138 (265)
T ss_dssp EEECTTCCH-HHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHH-CCSEEEEEHHHHHHHHHHHC------
T ss_pred EEECCCCCh-HHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhc-CCcEEcCCHHHHHHHhcccCCCCCcc
Confidence 999999855 4567777888889999999999999998877654 34433 589999999999999986431 11
Q ss_pred C---CCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCCC--CCCchHHHHHHHHHHHhhhhccCCccc
Q 017155 250 V---NDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPRR--CGGQGDILSGSVAVFLSWARAKGKATT 324 (376)
Q Consensus 250 v---~~~d~~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~~--t~GsGDvLaG~Iaa~LA~~~~g~~~~~ 324 (376)
. .+++..+.+++++++++ ++|++||+.|+|+++++.+.+ .+|+|.+ ++||||+|+|+|++|+| ++ ++
T Consensus 139 s~~~~~~d~~~~a~~lA~~~~-~vVvlkG~~d~I~dg~~~~~~-~~G~~~m~~vtGtGc~Lsg~iaa~lA---~~-~~-- 210 (265)
T 3hpd_A 139 SLEYGEEEAKKLTMNAAREFN-TTVAVTGAVDYVSDGRRTFAV-YNGHELLGRVTGTGCMVAALTGAFVA---VT-EP-- 210 (265)
T ss_dssp ----CHHHHHHHHHHHHHHTT-SEEEEESSSEEEECSSCEEEE-CCCCGGGGGSTTHHHHHHHHHHHHHT---TS-CH--
T ss_pred CccccHHHHHHHHHHHHHHhC-CEEEEeCCCeEEEcCCEEEEE-CCCChHhhcCCccchHHHHHHHHHHh---cC-Ch--
Confidence 1 12467889999999998 578889999999999987754 5888874 59999999999999999 76 33
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHhhcC-CCCCcHHHHHHHHHH
Q 017155 325 SQMNPTVLGCIAGSALLRKAASLAFKDK-KRSTLTTDIIECLGR 367 (376)
Q Consensus 325 ~~~~~~~~aa~~a~~l~~~ag~~a~~~~-~~~~~a~dii~~l~~ 367 (376)
+.|+..|+++|+.|||+|+++. ++|.|..+++|.|+.
T Consensus 211 ------~~Aa~~a~~~~g~Age~Aa~~~~GpGsf~~~llD~L~~ 248 (265)
T 3hpd_A 211 ------LKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYR 248 (265)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHc
Confidence 5888999999999999998775 899999999999974
No 7
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.97 E-value=3.3e-30 Score=245.52 Aligned_cols=229 Identities=19% Similarity=0.227 Sum_probs=174.0
Q ss_pred HHHHHHhcccCeeEEecccCCcccc-----cccCCceeeecccccccccCCCchhhhhhhhhhhHHHHHHhhccCCEEEE
Q 017155 104 AAISALKIGADLSHVFCTKDAAPVI-----KSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLVV 178 (376)
Q Consensus 104 Aa~aAlr~Gaglvt~~t~~~~~~~i-----~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~davvI 178 (376)
..+..+|.-..+|+++|..-+.+.. ..--..+|.... +++.++++++|+++|
T Consensus 6 ~~~~~~r~~~plvh~itn~v~~~~~an~~la~gasp~M~~~~-----------------------~e~~~~~~~~dalvi 62 (265)
T 1v8a_A 6 EALKRVRERRPLVHNITNFVVMNTTANALLALGASPVMAHAE-----------------------EELEEMIRLADAVVI 62 (265)
T ss_dssp HHHHHHHHHCCEEEEECCTTTHHHHHHHHHHHTCEEEECCCT-----------------------TTHHHHHHHCSEEEE
T ss_pred HHHHHHHhcCCeEEEEccceeecchHHHHHhcCCCccccCCH-----------------------HHHHHHHHHCCEEEE
Confidence 3467788888999999977555432 223334555331 235556678999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccch----hhhccCCCeeEcCCHHHHHHHhccccc---CCC-
Q 017155 179 GPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKVLN---CEV- 250 (376)
Q Consensus 179 GpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~----~ll~~~~~~vITPN~~E~~~L~g~~~~---~~v- 250 (376)
|+|++ +++..+.+..+++.+++.++|+|||||++.....+. ++++.. ++|||||.+|+++|+|.... .+.
T Consensus 63 ~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~-~~vITPN~~E~~~L~g~~~~~~gvd~~ 140 (265)
T 1v8a_A 63 NIGTL-DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRG-VDVLKGNFGEISALLGEEGKTRGVDSL 140 (265)
T ss_dssp ECTTC-CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHC-CSEEEEEHHHHHHHHHHHC--------
T ss_pred EECCC-CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhC-CcEEcCCHHHHHHHhCCcccccCcCcc
Confidence 99999 556667777777777778999999999987655432 233323 89999999999999987521 111
Q ss_pred -CC-CcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCC--CCCCchHHHHHHHHHHHhhhhccCCcccCC
Q 017155 251 -ND-RDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR--RCGGQGDILSGSVAVFLSWARAKGKATTSQ 326 (376)
Q Consensus 251 -~~-~d~~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~--~t~GsGDvLaG~Iaa~LA~~~~g~~~~~~~ 326 (376)
+. +++.+.+++++++++ ++|++||.+|+|+++++.+.+ ..|++. .++||||+|+|+|++++| +|.+
T Consensus 141 ~~~~~~~~~aa~~la~~~~-~~VvlkG~~d~i~~~~~~~~~-~~g~~~~~~~~GtGD~Lsg~iaa~lA---~g~~----- 210 (265)
T 1v8a_A 141 EYGEEEAKKLTMNAAREFN-TTVAVTGAVDYVSDGRRTFAV-YNGHELLGRVTGTGCMVAALTGAFVA---VTEP----- 210 (265)
T ss_dssp --CHHHHHHHHHHHHHHTT-SEEEEESSSEEEECSSCEEEE-CCCCGGGGGSTTHHHHHHHHHHHHHT---TSCH-----
T ss_pred cccHHHHHHHHHHHHHHhC-cEEEEcCCCcEEEcCCEEEEE-cCCCcCcCCccChhHHHHHHHHHHHh---cCCC-----
Confidence 12 467889999999987 568899999999988776654 466664 599999999999999999 8753
Q ss_pred CChhHHHHHHHHHHHHHHHHHHhhc-CCCCCcHHHHHHHHHHHHHh
Q 017155 327 MNPTVLGCIAGSALLRKAASLAFKD-KKRSTLTTDIIECLGRSLED 371 (376)
Q Consensus 327 ~~~~~~aa~~a~~l~~~ag~~a~~~-~~~~~~a~dii~~l~~~~~~ 371 (376)
+.|+..|+++|+.||++|+++ .++|++++||+|.|+....+
T Consensus 211 ----~~Aa~~a~~~~~~Ag~~a~~~~~g~g~~~~~l~d~l~~l~~~ 252 (265)
T 1v8a_A 211 ----LKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINEN 252 (265)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHCCHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhcCHH
Confidence 488999999999999999887 57999999999999865443
No 8
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.96 E-value=9.6e-30 Score=243.08 Aligned_cols=191 Identities=18% Similarity=0.202 Sum_probs=153.9
Q ss_pred HHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccch----hhhccCCCeeEcCCHHHHHH
Q 017155 165 EVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKR 240 (376)
Q Consensus 165 ~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~----~ll~~~~~~vITPN~~E~~~ 240 (376)
++.++++.+|+++||+|++++ +..+.+...++.+++.++|+|||||++.....+. +++ ...++|||||.+|+++
T Consensus 51 e~~e~~~~a~alvIn~G~l~~-~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll-~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLGHLSQ-EREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLV-HNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECCSCCH-HHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHH-HTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecCCCCh-HHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHH-hcCCcEECCCHHHHHH
Confidence 456667889999999999854 4567788888888889999999999998766543 334 3468999999999999
Q ss_pred Hhccccc---CCCC--C---C---cHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCC--CCCCchHHHHH
Q 017155 241 LVQKVLN---CEVN--D---R---DAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR--RCGGQGDILSG 307 (376)
Q Consensus 241 L~g~~~~---~~v~--~---~---d~~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~--~t~GsGDvLaG 307 (376)
|+|.... .+.. + + |+.+++++++++++.++|++||+.|+|+++++.+.+ .+|++. .++||||+|+|
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~D~i~dg~~~~~~-~~G~~~~~~v~GtGc~Ls~ 207 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIVL-QNGVPELDCFTGTGDLVGA 207 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSSEEEECSSCEEEE-CCCCGGGGSSTTHHHHHHH
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCeeEEEcCCEEEEe-CCCCcccCCcCCchHHHHH
Confidence 9996531 1110 1 2 567889999999873578899999999998876654 467775 37999999999
Q ss_pred HHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcC-CCCCcHHHHHHHHHHHH
Q 017155 308 SVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDK-KRSTLTTDIIECLGRSL 369 (376)
Q Consensus 308 ~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~-~~~~~a~dii~~l~~~~ 369 (376)
+|++|+| +|.++ +.|+..|+++|+.|||+|+++. ++|++..+++|+|+..-
T Consensus 208 ~Iaa~lA---~g~~~--------~~Aa~~A~~~~~~Age~A~~~~~g~Gsf~~~llD~L~~l~ 259 (273)
T 3dzv_A 208 LVAALLG---EGNAP--------MTAAVAAVSYFNLCGEKAKTKSQGLADFRQNTLNQLSLLM 259 (273)
T ss_dssp HHHHHHH---HTCCH--------HHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHGG
T ss_pred HHHHHHh---CCCCH--------HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHcCC
Confidence 9999999 88765 5889999999999999998775 79999999999998643
No 9
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.96 E-value=9.2e-29 Score=256.47 Aligned_cols=236 Identities=16% Similarity=0.152 Sum_probs=182.5
Q ss_pred HHHHHHHHHHhcccCeeEEecccCCcccccc-----cCCceeeecccccccccCCCchhhhhhhhhhhHHHHHHhhcc-C
Q 017155 100 APYFAAISALKIGADLSHVFCTKDAAPVIKS-----YSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMER-F 173 (376)
Q Consensus 100 A~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~-----~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~ 173 (376)
.-+-..+..+|....||+++|..-+.+...+ -...+|... .+++.++.+. +
T Consensus 251 ~~~~~~~~~vr~~~PLvh~iTN~V~~n~~AN~~La~GasPiM~~~-----------------------~~E~~e~~~~~~ 307 (540)
T 3nl6_A 251 DEIQSIISNTLKARPLVQHITNKVHQNFGANVTLALGSSPIMSEI-----------------------QSEVNDLAAIPH 307 (540)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHTTSEEECCCC-----------------------HHHHHHHTTSTT
T ss_pred HHHHHHHHHHHhcCCeEEEccccchHHHHHHHHHHcCCChhhcCC-----------------------HHHHHHHHhccC
Confidence 5566677889999999999998655543322 223455532 3567778888 9
Q ss_pred CEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccch----hhhccCCCeeEcCCHHHHHHHhcccc---
Q 017155 174 DCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKVL--- 246 (376)
Q Consensus 174 davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~----~ll~~~~~~vITPN~~E~~~L~g~~~--- 246 (376)
|+++||+|++++ .+.+..+++.+++.++|+|||||++.....+. ++++..+++|||||.+|+++|+|...
T Consensus 308 ~alvin~G~l~~---~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g~~~~~~ 384 (540)
T 3nl6_A 308 ATLLLNTGSVAP---PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERM 384 (540)
T ss_dssp CEEEEESSCSCC---HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHTTC-----
T ss_pred CeEEEeCCCCCH---HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHhCCCcccc
Confidence 999999999977 56777888888889999999999998766553 34443468999999999999998642
Q ss_pred -cCCC----CCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcC-------------------CeEEEEeeCCC-CCC--CC
Q 017155 247 -NCEV----NDRDAPELLQSLAKQIGGVTILQKGKSDLISDG-------------------EIAKSVSIYGS-PRR--CG 299 (376)
Q Consensus 247 -~~~v----~~~d~~~~a~~la~~~~~~vVllKG~~~vi~~~-------------------~~~~~i~~~g~-~~~--t~ 299 (376)
+.+. +.+++.+++++++++++ ++|++||+.|+|+++ +..+ ++.+|+ +.+ ++
T Consensus 385 ~GVds~~~~~~~d~~~aA~~lA~~~~-~vVvlkG~~D~I~dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~m~~vt 462 (540)
T 3nl6_A 385 KGVDASSGISNELLIQATKIVAFKYK-TVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCV-AVEAGPIEIMGDIT 462 (540)
T ss_dssp ---------CCHHHHHHHHHHHHHTT-SEEEECSSSEEEEECCGGGBCCSSSCCSSCCTTSSCEE-EEECSCCGGGGSST
T ss_pred cccccccccCHHHHHHHHHHHHHHhC-CEEEEcCCCeEEECCCccccccccccccccccCCccEE-EECCCChhhccCcc
Confidence 1111 12567889999999998 678899999999988 4555 455888 863 79
Q ss_pred CchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcC-CCCCcHHHHHHHHHHHHHh
Q 017155 300 GQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDK-KRSTLTTDIIECLGRSLED 371 (376)
Q Consensus 300 GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~-~~~~~a~dii~~l~~~~~~ 371 (376)
||||+|+|+|++|+| ++.+. +..+.|++.|+++|+.||++|+++. ++|+++.+|+|+|+..-.+
T Consensus 463 GtGc~Lsg~Iaa~la---~~~~~-----~~~~~Aa~~a~~~~~~Ag~~A~~~~~g~Gsf~~~llD~L~~l~~~ 527 (540)
T 3nl6_A 463 ASGCSLGSTIACMIG---GQPSE-----GNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQVELIDALYRLTRE 527 (540)
T ss_dssp THHHHHHHHHHHHHH---TCCTT-----CBHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHS
T ss_pred CchHHHHHHHHHHHh---cCcCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHhhccc
Confidence 999999999999999 76520 0126889999999999999998765 7999999999999987665
No 10
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.95 E-value=3.9e-28 Score=231.80 Aligned_cols=229 Identities=21% Similarity=0.257 Sum_probs=170.6
Q ss_pred HHHHHHhcccCeeEEecccCCccc-----cc-ccCCceeeecccccccccCCCchhhhhhhhhhhHHHHHHhhccCCEEE
Q 017155 104 AAISALKIGADLSHVFCTKDAAPV-----IK-SYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWMERFDCLV 177 (376)
Q Consensus 104 Aa~aAlr~Gaglvt~~t~~~~~~~-----i~-~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~davv 177 (376)
..+.++|.++++|+++|..-+.+. +. ..+| .|.... +++.++++.+|+++
T Consensus 8 ~~~~~~r~~~plv~~itn~v~~~~~an~~l~~Ga~p-~m~~~~-----------------------~e~~~~~~~a~~lv 63 (272)
T 1ekq_A 8 KCLTAVRRHSPLVHSITNNVVTNFTANGLLALGASP-VMAYAK-----------------------EEVADMAKIAGALV 63 (272)
T ss_dssp HHHHHHHHHCCEEEEECCTTTHHHHHHHHHHHTCEE-ECCCCT-----------------------TTHHHHHHHSSEEE
T ss_pred HHHHHHHhcCCEEEEecccchhhhhHHHHHHcCCch-hhcCCH-----------------------HHHHHHHHhCCEEE
Confidence 457899999999999997743332 21 2333 444221 12334456799999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccch----hhhccCCCeeEcCCHHHHHHHhccc-cc---CC
Q 017155 178 VGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRLVQKV-LN---CE 249 (376)
Q Consensus 178 IGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~----~ll~~~~~~vITPN~~E~~~L~g~~-~~---~~ 249 (376)
|++|++ +.+..+.+.++++.+++.++|+||||++......+. ++++...++|||||..|+++|+|.. .. .+
T Consensus 64 i~~G~~-~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~~~~~~~gvd 142 (272)
T 1ekq_A 64 LNIGTL-SKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVD 142 (272)
T ss_dssp EECTTC-CHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC----------
T ss_pred EECCCC-CHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhCCCcccccCcc
Confidence 999996 456778888899888888999999999886544321 4454235899999999999999864 31 00
Q ss_pred --CCCCcHHHHHHHHHHhhCCeEEEEcCCceEEEcCCeEEEEeeCCCCC--CCCCchHHHHHHHHHHHhhhhccCCcccC
Q 017155 250 --VNDRDAPELLQSLAKQIGGVTILQKGKSDLISDGEIAKSVSIYGSPR--RCGGQGDILSGSVAVFLSWARAKGKATTS 325 (376)
Q Consensus 250 --v~~~d~~~~a~~la~~~~~~vVllKG~~~vi~~~~~~~~i~~~g~~~--~t~GsGDvLaG~Iaa~LA~~~~g~~~~~~ 325 (376)
.+.++..+.+++|+++++ ++|++||..++++++++.+++. .+++. .++|+||+|+|+|+++++ +|.++
T Consensus 143 ~~~~~~~~~~aa~~l~~~~~-~vVv~~G~~~~i~~~~~~~~~~-~~~~~~~~ttGaGD~lag~iaa~la---~g~~~--- 214 (272)
T 1ekq_A 143 AGEGGGDIIRLAQQAAQKLN-TVIAITGEVDVIADTSHVYTLH-NGHKLLTKVTGAGCLLTSVVGAFCA---VEENP--- 214 (272)
T ss_dssp -----HHHHHHHHHHHHHHT-SEEEECSSSEEEECSSCEEEEC-CCCGGGGGSTTHHHHHHHHHHHHHT---TCSSH---
T ss_pred CCCCHHHHHHHHHHHHHHcC-CEEEEECCCCEEEeCCEEEEEc-CCCccccCccCchHHHHHHHHHHHh---cCCCH---
Confidence 122467788999998887 4678899999988877766554 45554 499999999999999999 88765
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhhc---CCCCCcHHHHHHHHHHHHH
Q 017155 326 QMNPTVLGCIAGSALLRKAASLAFKD---KKRSTLTTDIIECLGRSLE 370 (376)
Q Consensus 326 ~~~~~~~aa~~a~~l~~~ag~~a~~~---~~~~~~a~dii~~l~~~~~ 370 (376)
..|+..|+++|+.||+.+.++ .++|+++.+++|.|+....
T Consensus 215 -----~~A~~~A~~~~~~A~~~a~~~~~~~g~g~~~~~~id~l~~~~~ 257 (272)
T 1ekq_A 215 -----LFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTE 257 (272)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCCH
T ss_pred -----HHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHhcCH
Confidence 588899999999999998875 5789999999999997654
No 11
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.7e-26 Score=236.06 Aligned_cols=231 Identities=17% Similarity=0.153 Sum_probs=161.1
Q ss_pred CCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhc----ccCeeEEecccCCcccc--cccCCceeeecccccccccCCCc
Q 017155 78 PSKHKGQAGKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPVI--KSYSPELIVHPILEESYNISGLE 151 (376)
Q Consensus 78 ~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~----Gaglvt~~t~~~~~~~i--~~~~pe~~~~~~~~~~~~~~~~~ 151 (376)
..+||+++|+||+|+|||+++|||++||+.++.+ |++.+|++|.|+...+. ... |+.++.
T Consensus 15 ~~~~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~~~~~~-p~~~v~------------- 80 (550)
T 3rm5_A 15 TLACNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSINNT-PKEVVF------------- 80 (550)
T ss_dssp GGGTTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEEEEEEC-CHHHHH-------------
T ss_pred ccccCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcceEEEC-CHHHHH-------------
Confidence 5679999999999999999999999999988876 55778888888765542 222 333221
Q ss_pred hhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcc-----cccccc-hhhhc-
Q 017155 152 DEERRCISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGL-----FLVTNS-IDLVS- 224 (376)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl-----~ll~~~-~~ll~- 224 (376)
++++.+.+. .++|+|++|++ +.+..+.+.++++.+++.+.|+|+||+.. .++... .+.++
T Consensus 81 ---------~ql~~~~~d-~~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~ 147 (550)
T 3rm5_A 81 ---------QTLESNLKD-MKCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITE 147 (550)
T ss_dssp ---------HHHHHHHHH-BCCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHH
T ss_pred ---------HHHHHHHhC-CCCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHH
Confidence 122333333 37999999975 77888999999988766688999999864 222221 11122
Q ss_pred c-CC-CeeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCce------------EEE--cCCeEEE
Q 017155 225 G-YP-LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKSD------------LIS--DGEIAKS 288 (376)
Q Consensus 225 ~-~~-~~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~~------------vi~--~~~~~~~ 288 (376)
. .+ ++|||||..|+++|+|..... .+.++..+++++|.+++++..|++||++. +++ ++++.+.
T Consensus 148 ~Ll~~a~iitPN~~Ea~~L~g~~~~i-~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~ 226 (550)
T 3rm5_A 148 KVAPFADILTPNIPECYKLLGEERKV-NGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFII 226 (550)
T ss_dssp HTGGGCSEECCBHHHHHHHHSCCCCC-CSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEE
T ss_pred HhhCcceEEecCHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEE
Confidence 2 33 799999999999999864111 12357788999999887632567787542 566 4566665
Q ss_pred EeeCCCC-CCCCCchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHH-HHHHHHHHHH
Q 017155 289 VSIYGSP-RRCGGQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGS-ALLRKAASLA 348 (376)
Q Consensus 289 i~~~g~~-~~t~GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~-~l~~~ag~~a 348 (376)
++....+ ..++|+||+|+|+|+++++ +|.++ ..|+..|. |+|+ +-+.+
T Consensus 227 ~~~~~v~~~~t~GtGD~fsaaiaa~La---~G~~l--------~eAv~~A~~~v~~-ai~~~ 276 (550)
T 3rm5_A 227 FKGNFVNTTHTHGTGCTLASAIASNLA---RGYSL--------PQSVYGGIEYVQN-AVAIG 276 (550)
T ss_dssp EEEECCCCSCCBTHHHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHH-HHHHC
T ss_pred EEecCcCCCCCcChhHHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHH-HHHHH
Confidence 6544444 3699999999999999999 99875 47777777 4444 43443
No 12
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.92 E-value=5.2e-24 Score=201.31 Aligned_cols=225 Identities=20% Similarity=0.210 Sum_probs=154.9
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhc----ccCeeEEecccCCcccccccCCceeeecccccccccCCCchhhhhhhhhh
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSK 161 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~----Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (376)
.+||+|+|+|+|+||+++|+++++++ |+|++|++++++.... ..+++.. +.. + .+ .+
T Consensus 4 ~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~---~~~~~~~--~~~----------~---~~-~~ 64 (271)
T 2i5b_A 4 HKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNS---WNHQVFP--IDT----------D---TI-RA 64 (271)
T ss_dssp CEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTT---TEEEEEE--CCH----------H---HH-HH
T ss_pred CEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCC---ceeEEEe--CCH----------H---HH-HH
Confidence 58999999999999999999999998 9999999998776541 1223321 110 0 01 12
Q ss_pred hHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCC-CEEEeCCccc-----ccccc-hhhhc-c-CC-CeeE
Q 017155 162 ILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNV-PIVIDGDGLF-----LVTNS-IDLVS-G-YP-LAVL 231 (376)
Q Consensus 162 ~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~-pvVLDpdgl~-----ll~~~-~~ll~-~-~~-~~vI 231 (376)
+++.+.+.+ ++|++++|+ ++. .+ .+..+++.+++.+. |+|+||+... ++... .+.+. . .+ .+||
T Consensus 65 ~~~~l~~~~-~~d~v~~G~-l~~-~~---~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~dil 138 (271)
T 2i5b_A 65 QLATITDGI-GVDAMKTGM-LPT-VD---IIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVI 138 (271)
T ss_dssp HHHHHHHHS-CCSEEEECC-CCS-HH---HHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEE
T ss_pred HHHHHHhCC-CCCEEEECC-CCC-HH---HHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEE
Confidence 234444433 789999997 654 43 34455555556677 7999986432 22211 01121 2 23 6899
Q ss_pred cCCHHHHHHHhccc-ccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc--------eEEEcCCeEEEEeeCCCCC-CCCCc
Q 017155 232 TPNVNEYKRLVQKV-LNCEVNDRDAPELLQSLAKQIGGVTILQKGKS--------DLISDGEIAKSVSIYGSPR-RCGGQ 301 (376)
Q Consensus 232 TPN~~E~~~L~g~~-~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~--------~vi~~~~~~~~i~~~g~~~-~t~Gs 301 (376)
|||..|+++|+|.. .. +.++..+.++++.+.. ...|++|+++ ++++++++.++++....+. .++|+
T Consensus 139 tpN~~E~~~L~g~~~~~---~~~~~~~~a~~l~~~g-~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~Ga 214 (271)
T 2i5b_A 139 TPNLFEASQLSGMDELK---TVDDMIEAAKKIHALG-AQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGA 214 (271)
T ss_dssp CCBHHHHHHHHTCCCCC---SHHHHHHHHHHHHTTT-CSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTH
T ss_pred cCCHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhC-CCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCCh
Confidence 99999999999864 21 2246677888888754 4567777765 5777776666676555554 59999
Q ss_pred hHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhh
Q 017155 302 GDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFK 350 (376)
Q Consensus 302 GDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~ 350 (376)
||+|+|.++++++ +|.++ ..|+..|.++++.+.+.+.+
T Consensus 215 GD~f~a~~~~~l~---~g~~~--------~~A~~~A~~~~~~~~~~~~~ 252 (271)
T 2i5b_A 215 GCTFSAAVTAELA---KGAEV--------KEAIYAAKEFITAAIKESFP 252 (271)
T ss_dssp HHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999 88765 57788888888888876543
No 13
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.90 E-value=1.1e-22 Score=190.79 Aligned_cols=218 Identities=21% Similarity=0.268 Sum_probs=143.2
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhc----ccCeeEEecccCCccc--ccccCCceeeecccccccccCCCchhhhhhhh
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPV--IKSYSPELIVHPILEESYNISGLEDEERRCIS 159 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~----Gaglvt~~t~~~~~~~--i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (376)
++|++|+|+|+|+||+++|+++++++ |++++|++++++...+ +....||.+.
T Consensus 2 ~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~~~~~~~~~~~~---------------------- 59 (258)
T 1ub0_A 2 RVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRVHLLPPEVVY---------------------- 59 (258)
T ss_dssp CEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEEEECCHHHHH----------------------
T ss_pred CEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCceeEEEeCCHHHHH----------------------
Confidence 68999999999999999999999998 9999999998876543 2222333321
Q ss_pred hhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCC-CCEEEeCCc-----ccccccc-hhhh-cc-CC-Ce
Q 017155 160 SKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSN-VPIVIDGDG-----LFLVTNS-IDLV-SG-YP-LA 229 (376)
Q Consensus 160 ~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~-~pvVLDpdg-----l~ll~~~-~~ll-~~-~~-~~ 229 (376)
++++.+.+.+ ++|++++|+ ++ +++. +..+++.+++.+ +|+|+||+. ..+.... .+.+ .. .+ .+
T Consensus 60 -~~~~~~~~~~-~~~~v~~G~-l~-~~~~---~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~d 132 (258)
T 1ub0_A 60 -AQIESVAQDF-PLHAAKTGA-LG-DAAI---VEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLAD 132 (258)
T ss_dssp -HHHHHHHHHS-CCSEEEECC-CC-SHHH---HHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCS
T ss_pred -HHHHHHHcCC-CCCEEEECC-cC-CHHH---HHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCe
Confidence 1223333322 578999986 54 5443 444555555667 899999954 3233311 0111 11 23 68
Q ss_pred eEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC---c----eEEEcCCeEEEEeeCCCCC-CCCCc
Q 017155 230 VLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK---S----DLISDGEIAKSVSIYGSPR-RCGGQ 301 (376)
Q Consensus 230 vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~---~----~vi~~~~~~~~i~~~g~~~-~t~Gs 301 (376)
|||||..|+++|+|.... +.++..+.++++.+ ++...|++|++ + ++++++++.++++....+. .++|+
T Consensus 133 il~pN~~E~~~L~g~~~~---~~~~~~~~a~~l~~-~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~Ga 208 (258)
T 1ub0_A 133 LVTPNRLEAEALLGRPIR---TLKEAEEAAKALLA-LGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGT 208 (258)
T ss_dssp EECCBHHHHHHHHCSCCC---SHHHHHHHHHHHHT-TSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTH
T ss_pred EEeCCHHHHHHHhCCCCC---CHHHHHHHHHHHHH-cCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCCh
Confidence 999999999999986431 22456777888877 44434555654 3 5777777766666544444 59999
Q ss_pred hHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHH
Q 017155 302 GDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASL 347 (376)
Q Consensus 302 GDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~ 347 (376)
||+|+|.+++.++ +|.++ ..|+..|..+...+.+.
T Consensus 209 GD~f~a~~~~~l~---~g~~~--------~~a~~~a~~~~~~~~~~ 243 (258)
T 1ub0_A 209 GCTLSAAIAALLA---KGRPL--------AEAVAEAKAYLTRALKT 243 (258)
T ss_dssp HHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHHHHHH
Confidence 9999999999999 88765 46666664444444443
No 14
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.89 E-value=5.2e-22 Score=190.27 Aligned_cols=241 Identities=14% Similarity=0.109 Sum_probs=163.3
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHHhc----ccCeeEEecccCCccc--ccccCC-ceeeecccccccccCCCchhhhhh
Q 017155 85 AGKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPV--IKSYSP-ELIVHPILEESYNISGLEDEERRC 157 (376)
Q Consensus 85 ~G~vliIgGs~~~~GA~ilAa~aAlr~----Gaglvt~~t~~~~~~~--i~~~~p-e~~~~~~~~~~~~~~~~~~~~~~~ 157 (376)
..+||+|+|+++++||+++||+.++.+ |+.++|+++.|+...+ +....+ +.+.
T Consensus 3 ~~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~~~~~-------------------- 62 (282)
T 3h74_A 3 LSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLSTWLP-------------------- 62 (282)
T ss_dssp CEEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCTTTHH--------------------
T ss_pred CCeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecChHHHH--------------------
Confidence 358999999999999999999999988 8899999999987654 221111 2111
Q ss_pred hhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc------ccccc-hhhhcc-CC-C
Q 017155 158 ISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF------LVTNS-IDLVSG-YP-L 228 (376)
Q Consensus 158 ~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~------ll~~~-~~ll~~-~~-~ 228 (376)
+.++.+...--++|+|++|+ ..+.+..+.+.++++.+ .+.|+|+||+... ++... .+.+++ .+ .
T Consensus 63 ---~~~~~~~~~d~~~daik~G~--l~s~~~i~~v~~~l~~~--~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~a 135 (282)
T 3h74_A 63 ---QVFAHWTRAQLHFDQALIGY--VGSVALCQQITTYLEQQ--TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQA 135 (282)
T ss_dssp ---HHHHHHHHTTCCCSEEEECC--CCSHHHHHHHHHHHHHS--CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGC
T ss_pred ---HHHHHHHHcCCccCEEEECC--CCCHHHHHHHHHHHHHC--CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccC
Confidence 11233321112789999985 45777888888888765 4678999998652 11211 111112 33 7
Q ss_pred eeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCC-eEEEEcCC------ceEEEc-CCeEEEEeeCCCCCCCCC
Q 017155 229 AVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGG-VTILQKGK------SDLISD-GEIAKSVSIYGSPRRCGG 300 (376)
Q Consensus 229 ~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~-~vVllKG~------~~vi~~-~~~~~~i~~~g~~~~t~G 300 (376)
+|||||..|++.|+|.+.. +.++..+++++|.++++. ..|++||. +.++++ +++.+++.....+..++|
T Consensus 136 diitpN~~Ea~~L~g~~~~---~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~~dt~G 212 (282)
T 3h74_A 136 DVILPNTTEAALLTGAPYQ---VTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLPGHYNG 212 (282)
T ss_dssp SEECCCHHHHHHHHTCCCC---SSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCSSCCTT
T ss_pred CEECCCHHHHHHHhCCCCC---CHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCCCCCcC
Confidence 9999999999999987542 235788889999875665 46777874 334564 555555553333446999
Q ss_pred chHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcC----CCCCcHHHHHHHHH
Q 017155 301 QGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDK----KRSTLTTDIIECLG 366 (376)
Q Consensus 301 sGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~----~~~~~a~dii~~l~ 366 (376)
+||+|+|.+++.++ +|.++ ..|+..|..+...+-+.+.+.. .+|+.-++.+..|-
T Consensus 213 aGD~fsaai~a~l~---~g~~l--------~~A~~~A~~~~~~ai~~~~~~~~g~~~~Gv~~e~~L~~l~ 271 (282)
T 3h74_A 213 TGDTLAAVIAGLLG---RGYPL--------APTLARANQWLNMAVAETIAQNRTDDRQGVALGDLLQAIL 271 (282)
T ss_dssp HHHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHHHHHHHHTTCSCTTSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---CCCCH--------HHHHHHHHHHHHHHHHHHhhCCCCchhcCCcHHHHHHHHH
Confidence 99999999999999 88775 4666666666555555544321 36666666655553
No 15
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.88 E-value=1e-21 Score=188.93 Aligned_cols=245 Identities=17% Similarity=0.169 Sum_probs=159.5
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHHhc----ccCeeEEecccCCcccccccCCceeeecccccccccCCCchhhhhhhhh
Q 017155 85 AGKIAVIGGCREYTGAPYFAAISALKI----GADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISS 160 (376)
Q Consensus 85 ~G~vliIgGs~~~~GA~ilAa~aAlr~----Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (376)
..+||+|+|+++++||+++||+.++.+ |+.++|+++.|+. .+ ....+..+..++ .
T Consensus 7 m~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~t-g~-~~~~~~~~~~~~------------------~- 65 (291)
T 3mbh_A 7 VKKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHT-QY-PGFSFLDLTDEM------------------P- 65 (291)
T ss_dssp CCEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECT-TS-SCCCEEECTTTH------------------H-
T ss_pred cCcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCC-CC-CCeeecCcHHHH------------------H-
Confidence 478999999999999999999998887 7789999999987 42 221111111000 0
Q ss_pred hhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccc------cccc-hhhhcc-CC-CeeE
Q 017155 161 KILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFL------VTNS-IDLVSG-YP-LAVL 231 (376)
Q Consensus 161 ~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~l------l~~~-~~ll~~-~~-~~vI 231 (376)
..++.+.+.=-++|+|++|+ ..+.+..+.+.++++.+++.++|+|+||+.... +... .+.+++ .+ .+||
T Consensus 66 ~~~~~~~~~d~~~~aik~G~--l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adii 143 (291)
T 3mbh_A 66 KIIAEWKKLEVQFDAIYTGY--LGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVI 143 (291)
T ss_dssp HHHHHHHHTTCCCSEEEECC--CSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEE
T ss_pred HHHHHHHhcCCccCEEEECC--CCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEE
Confidence 11122221112789999984 446667888999998886677899999987531 1111 011112 33 7999
Q ss_pred cCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc---------eEEEcC--CeEEEEeeCCCCCCCCC
Q 017155 232 TPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS---------DLISDG--EIAKSVSIYGSPRRCGG 300 (376)
Q Consensus 232 TPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~---------~vi~~~--~~~~~i~~~g~~~~t~G 300 (376)
|||..|++.|+|.+.....+.++..+++++|.+.. ...|++||.+ .+++++ ++.+++.....+..++|
T Consensus 144 tpN~~Ea~~L~g~~~~~~~~~~~~~~aa~~L~~~g-~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~dt~G 222 (291)
T 3mbh_A 144 TPNLTELFYLLDEPYKADSTDEELKEYLRLLSDKG-PQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLPAHYPG 222 (291)
T ss_dssp CCBHHHHHHHHTCCCCSCCCHHHHHHHHHHHHHTS-CSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCGGGSTT
T ss_pred eCCHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhC-CCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccCCCCCC
Confidence 99999999999875320012246777888888754 4567778653 256654 34545553333335999
Q ss_pred chHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcC---CCCCcHHHHHHH
Q 017155 301 QGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDK---KRSTLTTDIIEC 364 (376)
Q Consensus 301 sGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~---~~~~~a~dii~~ 364 (376)
+||+|+|.+++.++ +|.++ ..|+..|..+...+-+.+.+.. ..|+.-++.+..
T Consensus 223 aGD~f~aai~a~l~---~g~~l--------~~A~~~A~~~~~~ai~~~~~~~~~~~~gv~~e~~L~~ 278 (291)
T 3mbh_A 223 TGDTFTSVITGSLM---QGDSL--------PMALDRATQFILQGIRATFGYEYDNREGILLEKVLHN 278 (291)
T ss_dssp HHHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHHHHTTTTSCCCGGGCSCHHHHGGG
T ss_pred hHHHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHHHHHHHHhcCCCcccCCcHHHHHHH
Confidence 99999999999999 88775 4667667665555555544322 366665554443
No 16
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.85 E-value=1.6e-20 Score=179.55 Aligned_cols=219 Identities=20% Similarity=0.203 Sum_probs=141.9
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHHh----cccCeeEEecccCCccccc--ccCCceeeecccccccccCCCchhhhhhh
Q 017155 85 AGKIAVIGGCREYTGAPYFAAISALK----IGADLSHVFCTKDAAPVIK--SYSPELIVHPILEESYNISGLEDEERRCI 158 (376)
Q Consensus 85 ~G~vliIgGs~~~~GA~ilAa~aAlr----~Gaglvt~~t~~~~~~~i~--~~~pe~~~~~~~~~~~~~~~~~~~~~~~~ 158 (376)
.+++++|+|+|+|+||+++++..+++ .|++++|++++++...+.. ...||.+
T Consensus 25 ~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~~~~~~~~~~~~---------------------- 82 (288)
T 1jxh_A 25 RINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQSVYRIEPDFV---------------------- 82 (288)
T ss_dssp CCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEEEECCHHHH----------------------
T ss_pred CCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCeeeeeeCCHHHH----------------------
Confidence 47999999999999999999999998 6999999998776543211 1111111
Q ss_pred hhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCC-EEEeCCcc-----cccccc--hhhhc-cCC-C
Q 017155 159 SSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVP-IVIDGDGL-----FLVTNS--IDLVS-GYP-L 228 (376)
Q Consensus 159 ~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~p-vVLDpdgl-----~ll~~~--~~ll~-~~~-~ 228 (376)
.++++.+.+.+ ++|++++|+ ++ +.+ .+..+++.+++.+++ +|+||+.. .+.... ..+.+ -++ .
T Consensus 83 -~~~~~~l~~~~-~~~~v~~G~-l~-~~~---~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~ 155 (288)
T 1jxh_A 83 -AAQLDSVFSDV-RIDTTKIGM-LA-ETD---IVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQV 155 (288)
T ss_dssp -HHHHHHHHTTS-CCSEEEECC-CC-SHH---HHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGC
T ss_pred -HHHHHHHHhCC-CCCEEEECC-CC-CHH---HHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhC
Confidence 01122332222 479999986 54 433 455556666667775 99998754 233211 01111 123 6
Q ss_pred eeEcCCHHHHHHHhcc-cccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc-------eEEEcCCeEEEEeeCCCCC-CCC
Q 017155 229 AVLTPNVNEYKRLVQK-VLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS-------DLISDGEIAKSVSIYGSPR-RCG 299 (376)
Q Consensus 229 ~vITPN~~E~~~L~g~-~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~-------~vi~~~~~~~~i~~~g~~~-~t~ 299 (376)
+|||||..|+++|+|. ... +.++..+.++++.+.. ...|++|++. ++++++++.++++....+. .++
T Consensus 156 dil~pN~~Ea~~L~g~~~~~---~~~~~~~~a~~l~~~g-~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdtt 231 (288)
T 1jxh_A 156 SLITPNLPEAAALLDAPHAR---TEQEMLAQGRALLAMG-CEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTH 231 (288)
T ss_dssp SEEECBHHHHHHHHTCCCCC---SHHHHHHHHHHHHHTT-CSEEEEBC---------CEEECSSCEEEC---CCCCSCCB
T ss_pred cEEcCCHHHHHHHcCCCCCC---CHHHHHHHHHHHHHhC-CCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCC
Confidence 8999999999999986 421 2246677888888754 4567778764 7888776666565444443 599
Q ss_pred CchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHH
Q 017155 300 GQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASL 347 (376)
Q Consensus 300 GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~ 347 (376)
|+||+|+|.+++.++ +|.++ ..|+..|......+-+.
T Consensus 232 GAGD~f~a~~~a~l~---~g~~~--------~~A~~~A~a~a~~~v~~ 268 (288)
T 1jxh_A 232 GTGCTLSAALAALRP---RHRSW--------GETVNEAKAWLSAALAQ 268 (288)
T ss_dssp THHHHHHHHHHHHGG---GSSSH--------HHHHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHHHHHh
Confidence 999999999999999 88765 46666665544444433
No 17
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.81 E-value=1.1e-18 Score=167.25 Aligned_cols=227 Identities=17% Similarity=0.125 Sum_probs=145.5
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHHhc-cc---CeeEEecccCCcccccccCCceeeecccccccccCCCchhhhhhhhh
Q 017155 85 AGKIAVIGGCREYTGAPYFAAISALKI-GA---DLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISS 160 (376)
Q Consensus 85 ~G~vliIgGs~~~~GA~ilAa~aAlr~-Ga---glvt~~t~~~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (376)
..+||+|+|+++++||++.||...+.+ |+ .+.|+++.++. . + ++.....+. +++. .
T Consensus 4 m~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t-~-~----~~~~g~~~~----------~~~~----~ 63 (289)
T 3pzs_A 4 MKNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHT-Q-Y----GHWTGCVMP----------ASHL----T 63 (289)
T ss_dssp -CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCG-G-G----SCCCEEECC----------HHHH----H
T ss_pred CCeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCC-C-C----CCcccccCC----------HHHH----H
Confidence 368999999999999999999988877 54 55566655433 1 1 111111111 0110 1
Q ss_pred hhHHHHHHh--hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCC--CCEEEeCCccc-----ccccc-hhhhc-c-CC-
Q 017155 161 KILAEVDKW--MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSN--VPIVIDGDGLF-----LVTNS-IDLVS-G-YP- 227 (376)
Q Consensus 161 ~~~~~l~~~--l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~--~pvVLDpdgl~-----ll~~~-~~ll~-~-~~- 227 (376)
+.++.+.++ +.++|+|++|+ + .+.+..+.+.++++.+++.+ .++|+||+... ++... .+.++ . .+
T Consensus 64 ~~~~~~~~~~~l~~~d~v~~G~-l-~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~ 141 (289)
T 3pzs_A 64 DIVQGIADIDRLKDCDAVLSGY-I-GSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPA 141 (289)
T ss_dssp HHHHHHHHTTCGGGCCEEEECC-C-SSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHH
T ss_pred HHHHHHHhcCCccCCCEEEECC-C-CCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhcc
Confidence 123333332 35899998885 4 46677889999998887644 78999997542 22211 11121 1 22
Q ss_pred CeeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc-e---------EEEcCCeEEEEeeCCCC--
Q 017155 228 LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS-D---------LISDGEIAKSVSIYGSP-- 295 (376)
Q Consensus 228 ~~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~-~---------vi~~~~~~~~i~~~g~~-- 295 (376)
++|||||..|++.|+|.+.. +.++..+++++|.+.. ...|++||.+ . +++++++.+++.....+
T Consensus 142 ~diitpN~~E~~~L~g~~~~---~~~~~~~aa~~l~~~g-~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (289)
T 3pzs_A 142 SDMIAPNLLELEQLSGERVE---NVEQAVQVARSLCARG-PKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFG 217 (289)
T ss_dssp CSEECCCHHHHHHHHTSCCC---SHHHHHHHHHHHHTTS-CSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCT
T ss_pred CCEEeCCHHHHHHHhCCCCC---CHHHHHHHHHHHHHHC-CCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCC
Confidence 79999999999999997532 2346777888887654 4567788643 2 66677666656533333
Q ss_pred -CCCCCchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHH
Q 017155 296 -RRCGGQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLA 348 (376)
Q Consensus 296 -~~t~GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a 348 (376)
..++|+||+|+|.+++.++ +|.++ ..|+..|..+...+-+..
T Consensus 218 v~dt~GaGD~f~a~~~~~l~---~g~~~--------~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 218 KRQPVGVGDLTSGLLLVNLL---KGEPL--------DKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp TSCCTTHHHHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHH---CCCCH--------HHHHHHHHHHHHHHHHHH
Confidence 3499999999999999999 88775 355555655444444443
No 18
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.75 E-value=8.3e-17 Score=155.44 Aligned_cols=223 Identities=13% Similarity=0.084 Sum_probs=140.3
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHHhc-ccCeeEEeccc--CCcccccccCCceeeecccccccccCCCchhhhhhhhhh
Q 017155 85 AGKIAVIGGCREYTGAPYFAAISALKI-GADLSHVFCTK--DAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSK 161 (376)
Q Consensus 85 ~G~vliIgGs~~~~GA~ilAa~aAlr~-Gaglvt~~t~~--~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (376)
..+||+|.|++.++|+|..||...+.+ |+....+.|.+ +... +....... ++.+
T Consensus 3 ~~~VLsI~~~~~~G~~G~~aa~~~l~~~G~~v~~~~T~~~Snhtg-~~~~~g~~----------------------~~~~ 59 (300)
T 3zs7_A 3 EKTVLSIQSFVTHGYVGNKAATFPLQLHGFDVDGINTVCLSNHSG-YPVIRGHR----------------------MSLQ 59 (300)
T ss_dssp CCEEEEEEEEESSSSCHHHHHHHHHHHTTCEEEEEEEEEESSCTT-SSCCCEEE----------------------CCHH
T ss_pred CCeEEEEeCccCCCcchHHHHHHHHHHcCCeeEEeeeEEecCCCC-CCCcCCCc----------------------CCHH
Confidence 468999999999999999999988877 88777776666 4332 22111111 1112
Q ss_pred hHHHHHHhh------ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCC------CCEEEeCCccc---cc-ccc-hhhhc
Q 017155 162 ILAEVDKWM------ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSN------VPIVIDGDGLF---LV-TNS-IDLVS 224 (376)
Q Consensus 162 ~~~~l~~~l------~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~------~pvVLDpdgl~---ll-~~~-~~ll~ 224 (376)
+++.+.+.+ .++|+|++| +..+.+..+.+.++++.+++.+ .++|+||+... ++ ... .+.++
T Consensus 60 ql~~~~~~~~~~~~~~~~daV~tG--~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~ 137 (300)
T 3zs7_A 60 EYDELMEGVRANNFLSNYRYILTG--YINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYR 137 (300)
T ss_dssp HHHHHHHHHHHTTCGGGCSEEEEC--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHH
T ss_pred HHHHHHHHHHhcCCcccCCEEEEC--CCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHH
Confidence 233333322 368999997 4457788899999998876544 78999998553 22 111 11111
Q ss_pred c-CC-CeeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc--------eEEEc-C------CeEE
Q 017155 225 G-YP-LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS--------DLISD-G------EIAK 287 (376)
Q Consensus 225 ~-~~-~~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~--------~vi~~-~------~~~~ 287 (376)
. .+ .+|||||..|++.|+|.+.. +.++..+++++|.+.. ...|++||.+ ++++. + ++.+
T Consensus 138 ~Ll~~adiitPN~~Ea~~L~g~~~~---~~~~~~~aa~~L~~~G-~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~ 213 (300)
T 3zs7_A 138 ELVPLADIVTPNYFEASLLSGVTVN---DLSSAILAADWFHNCG-VAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRF 213 (300)
T ss_dssp HHGGGCSEECCCHHHHHHHHSSCCC---SHHHHHHHHHHHHHHT-CSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEE
T ss_pred HHhhhCCEecCCHHHHHHHhCCCCC---CHHHHHHHHHHHHHhC-CCEEEEecCcCCCCCceEEEEEeccccccCCCeEE
Confidence 1 23 79999999999999997542 2346778888888764 4566667642 13433 3 4555
Q ss_pred EEeeCCCCCCCCCchHHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHH
Q 017155 288 SVSIYGSPRRCGGQGDILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLA 348 (376)
Q Consensus 288 ~i~~~g~~~~t~GsGDvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a 348 (376)
++...-.+..++|+||+|++.+++.+. |.++ ..|+..|..+...+=+..
T Consensus 214 ~~~~~~v~~~~~GtGD~fsaal~a~l~----g~~~--------~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 214 SGVVPYHEGRYTGTGDVFAACLLAFSH----SHPM--------DVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp EEEEECCSSCBTTHHHHHHHHHHHHHT----TSCH--------HHHHHHHHHHHHHHHHHT
T ss_pred EEEeccCCCCCcCHHHHHHHHHHHHHc----CCCH--------HHHHHHHHHHHHHHHHHH
Confidence 554322333589999999999988874 4443 355555555444444433
No 19
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.71 E-value=4.4e-16 Score=147.82 Aligned_cols=228 Identities=15% Similarity=0.114 Sum_probs=140.1
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhc-ccCeeEEecccCCcccccccCCceeeecccccccccCCCchhhhhhhhhhhHH
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKI-GADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILA 164 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~-Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (376)
++||+|+|++.++|+|..+++.+++. |.....+.+. ++. ..++....... . +.+++. .+.++
T Consensus 16 ~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~-----i~~-~~~g~~~~~g~----~---~~~~~~----~~~~~ 78 (283)
T 2ddm_A 16 ADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTV-----LLS-NTPHYDTFYGG----A---IPDEWF----SGYLR 78 (283)
T ss_dssp CSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEE-----EES-SCTTSSCCCEE----E---CCHHHH----HHHHH
T ss_pred CeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEE-----Eec-cCCCcCceeee----e---CCHHHH----HHHHH
Confidence 79999999999999999999999998 5543333221 111 11111100000 0 001111 01223
Q ss_pred HHHH--hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhc--CCCCEEEeCCccc-----ccccc-h-hhhcc-CC-CeeE
Q 017155 165 EVDK--WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQ--SNVPIVIDGDGLF-----LVTNS-I-DLVSG-YP-LAVL 231 (376)
Q Consensus 165 ~l~~--~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~--~~~pvVLDpdgl~-----ll~~~-~-~ll~~-~~-~~vI 231 (376)
.+.+ ++++++++++|+ ++. .+..+.+.++++.+++ .++++|+||+... .+... . .+... .+ ++||
T Consensus 79 ~l~~~~~~~~~~~v~~G~-l~~-~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil 156 (283)
T 2ddm_A 79 ALQERDALRQLRAVTTGY-MGT-ASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGI 156 (283)
T ss_dssp HHHHTTCCTTCCEEEECC-CSC-HHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEE
T ss_pred HHHhcCCcccCCEEEECC-cCC-HHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEe
Confidence 3333 355789999985 544 4566788888888877 6889999987432 11111 1 11111 23 7899
Q ss_pred cCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCCc---------eEEEcCCeEEEEeeCCCCCCCCCch
Q 017155 232 TPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGKS---------DLISDGEIAKSVSIYGSPRRCGGQG 302 (376)
Q Consensus 232 TPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~~---------~vi~~~~~~~~i~~~g~~~~t~GsG 302 (376)
|||..|++.|+|.... +.++..+.++++.+.. ...|++|++. ++++++++.+++.....+..++|+|
T Consensus 157 ~pN~~E~~~L~g~~~~---~~~~~~~~a~~l~~~g-~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~vdt~GAG 232 (283)
T 2ddm_A 157 TPNIFELEILTGKNCR---DLDSAIAAAKSLLSDT-LKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVKTDLKGTG 232 (283)
T ss_dssp CCBHHHHHHHHTSCCS---SHHHHHHHHHHHCCSS-CCEEEEEC-------CEEEEEEEETTEEEEEEEECCCCCCCCHH
T ss_pred cCCHHHHHHHhCCCCC---CHHHHHHHHHHHHHcC-CCEEEEccccCccCCCceeEEEEeCCceEEEeeceeCCCCCChH
Confidence 9999999999986421 2245667777777643 3456667643 4677777666665444444599999
Q ss_pred HHHHHHHHHHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHH
Q 017155 303 DILSGSVAVFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASL 347 (376)
Q Consensus 303 DvLaG~Iaa~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~ 347 (376)
|+|+|.+++.++ +|.++ ..|+..|......+...
T Consensus 233 Daf~a~~~~~l~---~g~~~--------~~A~~~A~a~a~~~v~~ 266 (283)
T 2ddm_A 233 DLFCAQLISGLL---KGKAL--------TDAVHRAGLRVLEVMRY 266 (283)
T ss_dssp HHHHHHHHHHHH---TTCCH--------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---cCCCH--------HHHHHHHHHHHHHHHHH
Confidence 999999999999 88765 35565565544444443
No 20
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.37 E-value=1.3e-11 Score=117.95 Aligned_cols=151 Identities=17% Similarity=0.179 Sum_probs=101.0
Q ss_pred hhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCHH
Q 017155 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVN 236 (376)
Q Consensus 157 ~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~ 236 (376)
.+++++++.+.+.++.+|+++++..++ . +.+..+++.+++.++++++||.....+. .++++ .+++||||..
T Consensus 119 ~l~~~~~~~~~~~~~~~~~v~~~~~~~--~---~~~~~~~~~a~~~g~~v~~D~~~~~~~~--~~ll~--~~dil~~N~~ 189 (309)
T 1rkd_A 119 ALSPALVEAQRERIANASALLMQLESP--L---ESVMAAAKIAHQNKTIVALNPAPARELP--DELLA--LVDIITPNET 189 (309)
T ss_dssp GCCHHHHHTTHHHHHHCSEEEECSSSC--H---HHHHHHHHHHHHTTCEEEECCCSCCCCC--HHHHT--TCSEECCCHH
T ss_pred cCCHHHHHHHHHhcccCCEEEEeCCCC--H---HHHHHHHHHHHHcCCEEEEECCccccch--HHHHh--hCCEEEcCHH
Confidence 455566655545567899999974332 2 3566677777888999999998763221 23442 3789999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHh
Q 017155 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLS 314 (376)
Q Consensus 237 E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA 314 (376)
|++.|+|.... +.++..+.++++.+.....+|+..|+ +.+++++++.+++.....+. .++|+||+|+|.+.+.++
T Consensus 190 E~~~l~g~~~~---~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~ 266 (309)
T 1rkd_A 190 EAEKLTGIRVE---NDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALL 266 (309)
T ss_dssp HHHHHHSCCCS---SHHHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCC---CHHHHHHHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHH
Confidence 99999986421 22456677888877533334444454 56667777766665322222 599999988888888787
Q ss_pred hhhccCCc
Q 017155 315 WARAKGKA 322 (376)
Q Consensus 315 ~~~~g~~~ 322 (376)
+|.++
T Consensus 267 ---~g~~~ 271 (309)
T 1rkd_A 267 ---EEKPL 271 (309)
T ss_dssp ---TTCCH
T ss_pred ---cCCCH
Confidence 78765
No 21
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.35 E-value=4.3e-11 Score=114.33 Aligned_cols=183 Identities=18% Similarity=0.201 Sum_probs=113.7
Q ss_pred hhhhHHHHHHh---hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCC-CeeEcCC
Q 017155 159 SSKILAEVDKW---MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYP-LAVLTPN 234 (376)
Q Consensus 159 ~~~~~~~l~~~---l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~-~~vITPN 234 (376)
++++++.+.+. +...|++++...++.. ...+.+.++++.+++.++++++||....+ .+++. .. +++||||
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~~~~v~~D~~~~~l----~~~l~-~~~~dil~~N 187 (309)
T 3umo_A 114 NEDEFRQLEEQVLEIESGAILVISGSLPPG-VKLEKLTQLISAAQKQGIRCIVDSSGEAL----SAALA-IGNIELVKPN 187 (309)
T ss_dssp CHHHHHHHHHHHTTSCTTCEEEEESCCCTT-CCHHHHHHHHHHHHHTTCEEEEECCHHHH----HHHTS-SCCBSEECCB
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEEccCCCC-CCHHHHHHHHHHHHhcCCEEEEECCcHHH----HHHhc-cCCCeEEEeC
Confidence 44444444433 2467888886444322 12356778888888889999999964321 12232 22 5899999
Q ss_pred HHHHHHHhcccccCCCCCCcHHHHHHHHHHhhC-CeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHH
Q 017155 235 VNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIG-GVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAV 311 (376)
Q Consensus 235 ~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~-~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa 311 (376)
..|++.|+|.... +.++..+.++++.+++. ..+|+..|+ +.+++++++.+++.....+. .++|+||+|+|.+.+
T Consensus 188 ~~E~~~l~g~~~~---~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~ 264 (309)
T 3umo_A 188 QKELSALVNRELT---QPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTL 264 (309)
T ss_dssp HHHHHHHHTSCCC---STTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCC---CHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHH
Confidence 9999999987532 23467788888988753 244555555 66777777666665333222 599999988887777
Q ss_pred HHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCCC-CCcHHHHHHHH
Q 017155 312 FLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKKR-STLTTDIIECL 365 (376)
Q Consensus 312 ~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~-~~~a~dii~~l 365 (376)
.++ +|+++ ..|+..|. .+|..+..+.|. .....++-+.+
T Consensus 265 ~l~---~g~~~--------~~a~~~A~----~~aa~~v~~~G~~~~~~~ev~~~l 304 (309)
T 3umo_A 265 KLA---ENASL--------EEMVRFGV----AAGSAATLNQGTRLCSHDDTQKIY 304 (309)
T ss_dssp HHH---TTCCH--------HHHHHHHH----HHHHHHTTSSTTCCCCHHHHHHHH
T ss_pred HHH---cCCCH--------HHHHHHHH----HHHHHHhcCCCCCCCCHHHHHHHH
Confidence 777 78765 34444443 355555555543 23344444433
No 22
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.34 E-value=1.3e-11 Score=117.13 Aligned_cols=176 Identities=10% Similarity=0.036 Sum_probs=111.3
Q ss_pred HhhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhc-CCCCEEEeCCccccc-ccc--hhhhccCCCeeEcCCHHHHHHHh
Q 017155 168 KWMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQ-SNVPIVIDGDGLFLV-TNS--IDLVSGYPLAVLTPNVNEYKRLV 242 (376)
Q Consensus 168 ~~l~~~davvIGpGl~-~~~~~~~~~~~il~~a~~-~~~pvVLDpdgl~ll-~~~--~~ll~~~~~~vITPN~~E~~~L~ 242 (376)
+.++.+|++.+|. +. ..+...+.+.++++.+++ .++++++||...... ... .++++ .+++||||..|++.|+
T Consensus 110 ~~~~~~~~v~~g~-~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~ 186 (296)
T 2qhp_A 110 RLALNTRAVCFGS-LAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYTKEVLRESFK--RCNILKINDEELVTIS 186 (296)
T ss_dssp HHHHTEEEEEECS-GGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCCHHHHHHHHH--HCSEEEEEHHHHHHHH
T ss_pred hhhcCCCEEEECC-hHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccCHHHHHHHHH--HCCEEECCHHHHHHHh
Confidence 4456889999984 43 244556778888888876 588999999754211 110 12332 2789999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCC-eEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhcc
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQIGG-VTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAK 319 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~~~~-~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~g 319 (376)
|.... +..+..+.++++.++++. .+|+..|+ +.+++++++.+++.....+. .++|+||+|+|.+.+.++ +|
T Consensus 187 g~~~~---~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~---~g 260 (296)
T 2qhp_A 187 RMFGY---PGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASIL---NG 260 (296)
T ss_dssp HHTTC---TTSCHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHH---HT
T ss_pred cccCC---CCCCHHHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHH---cC
Confidence 86421 224667778888876443 34444454 66777777766665332222 599999988877777777 78
Q ss_pred CCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCC-CCCcHHHHHHH
Q 017155 320 GKATTSQMNPTVLGCIAGSALLRKAASLAFKDKK-RSTLTTDIIEC 364 (376)
Q Consensus 320 ~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~-~~~~a~dii~~ 364 (376)
.++ ..|+..|.. ++..+..+.| ....++++++.
T Consensus 261 ~~~--------~~a~~~a~~----~aa~~v~~~G~~~~~~~~l~~~ 294 (296)
T 2qhp_A 261 KSV--------PEAHKLAVE----VSAYVCTQSGAMPELPVILKDR 294 (296)
T ss_dssp CCH--------HHHHHHHHH----HHHHHHTSSSSSCCCCHHHHGG
T ss_pred CCH--------HHHHHHHHH----HHHHHHcCCCCCCCCcHHHHhh
Confidence 765 354544443 4444444433 33456666553
No 23
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.30 E-value=9e-11 Score=112.74 Aligned_cols=205 Identities=18% Similarity=0.202 Sum_probs=117.9
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhc-ccCeeEEecc--cCCcccccccCCceeeecccccccccCCCchhhhhhhhhhh
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKI-GADLSHVFCT--KDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKI 162 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~-Gaglvt~~t~--~~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (376)
.+||.|.++...+..|--++...++. |.....+.+. .+... +... +. + .+++++
T Consensus 5 ~~vl~i~~~~~~g~vG~D~g~~iL~~~GV~~~~v~~~~~~~~t~-~~~~-~g----~-----------------~l~~~~ 61 (312)
T 2yxt_A 5 CRVLSIQSHVIRGYVGNRAATFPLQVLGFEIDAVNSVQFSNHTG-YAHW-KG----Q-----------------VLNSDE 61 (312)
T ss_dssp CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCTT-SSCC-CE----E-----------------ECCHHH
T ss_pred CeEEEEecccCCCccchHhhHHHHHHcCCeEEEEEEEEecCCCC-cCCc-cC----c-----------------cCCHHH
Confidence 58999998887777666544333443 6654443332 11111 1100 00 0 112223
Q ss_pred HHHHHHh-----hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCC--CEEEeCCcccc-------c-ccc-hhhhc-c
Q 017155 163 LAEVDKW-----MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNV--PIVIDGDGLFL-------V-TNS-IDLVS-G 225 (376)
Q Consensus 163 ~~~l~~~-----l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~--pvVLDpdgl~l-------l-~~~-~~ll~-~ 225 (376)
++++.+. ++.+|++++|. ..+++..+.+.++++.+++.+. ++|+||+.... . ... .+.++ .
T Consensus 62 i~~~~~~~~~~~~~~~~~v~~G~--~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ 139 (312)
T 2yxt_A 62 LQELYEGLRLNNMNKYDYVLTGY--TRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEK 139 (312)
T ss_dssp HHHHHHHHHHTTCCCCSEEEECC--CCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHT
T ss_pred HHHHHHHHHhcCCccCCEEEECC--CCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHH
Confidence 3333222 56789988874 3355566777788888777664 48999874321 1 111 11121 1
Q ss_pred -CC-CeeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC--------ceEEE-------cCC----
Q 017155 226 -YP-LAVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK--------SDLIS-------DGE---- 284 (376)
Q Consensus 226 -~~-~~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~--------~~vi~-------~~~---- 284 (376)
.+ .++||||..|++.|+|.... +..+..++++++.+. +...|++|++ +++++ +++
T Consensus 140 ll~~~dil~pN~~Ea~~L~g~~~~---~~~~~~~~~~~l~~~-g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~ 215 (312)
T 2yxt_A 140 VVPLADIITPNQFEAELLSGRKIH---SQEEALRVMDMLHSM-GPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVV 215 (312)
T ss_dssp TGGGCSEECCCHHHHHHHHSCCCC---SHHHHHHHHHHHHHH-SCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCC
T ss_pred hhhhCCEEcCCHHHHHHHhCCCCC---CHHHHHHHHHHHHHc-CCCEEEEecccCCCCCCCceEEEEEeccccccccccc
Confidence 23 68999999999999986431 224566778888774 4345666643 24654 432
Q ss_pred -eEEEEeeCCCCCCCCCchHHHHHHHHHHHhhhhc-cCCc
Q 017155 285 -IAKSVSIYGSPRRCGGQGDILSGSVAVFLSWARA-KGKA 322 (376)
Q Consensus 285 -~~~~i~~~g~~~~t~GsGDvLaG~Iaa~LA~~~~-g~~~ 322 (376)
+.+++.....+..++|+||+|+|.+++.++ + |.++
T Consensus 216 ~~~~~~~~~~v~vdttGAGDaf~a~~~~~l~---~~g~~l 252 (312)
T 2yxt_A 216 MERIRMDIRKVDAVFVGTGDLFAAMLLAWTH---KHPNNL 252 (312)
T ss_dssp EEEEEEEEECCSSCCSSHHHHHHHHHHHHHH---HSTTCH
T ss_pred cceEEEeecccCCCCCCchHHHHHHHHHHHH---hcCCCH
Confidence 455554322222699999999988888888 7 7765
No 24
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.30 E-value=3.6e-11 Score=114.60 Aligned_cols=151 Identities=15% Similarity=0.189 Sum_probs=95.0
Q ss_pred hhhhHHHHHHh---hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCH
Q 017155 159 SSKILAEVDKW---MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNV 235 (376)
Q Consensus 159 ~~~~~~~l~~~---l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~ 235 (376)
++++++.+.+. ++.+|++++...++.. ...+.+.++++.+++.++++++||.+..+ .++++ ..+++||||.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~l~-~~~dil~~N~ 182 (306)
T 2jg5_A 109 TSTQFEQLLQQIKNTTSEDIVIVAGSVPSS-IPSDAYAQIAQITAQTGAKLVVDAEKELA----ESVLP-YHPLFIKPNK 182 (306)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEEESCCCTT-SCTTHHHHHHHHHHHHCCEEEEECCHHHH----HHHGG-GCCSEECCBH
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCCCCCC-CChHHHHHHHHHHHHCCCEEEEECChHHH----HHHHh-cCCeEEecCH
Confidence 44445544332 4678988885333321 01134566677777778999999986422 12332 1378999999
Q ss_pred HHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHH
Q 017155 236 NEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVF 312 (376)
Q Consensus 236 ~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllK-G~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~ 312 (376)
.|++.|+|.... +.++..+.++++.+.. ...|++| |+ +.+++++++.+++.....+. .++|+||+|+|.+.+.
T Consensus 183 ~E~~~l~g~~~~---~~~~~~~~~~~l~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~ 258 (306)
T 2jg5_A 183 DELEVMFNTTVN---SDADVIKYGRLLVDKG-AQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAG 258 (306)
T ss_dssp HHHHHHTTSCCC---SHHHHHHHHHHHHHTT-CSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCC---CHHHHHHHHHHHHHcC-CCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHH
Confidence 999999986421 2235566778887643 2334444 54 67777777666665333333 5999999887777777
Q ss_pred HhhhhccCCc
Q 017155 313 LSWARAKGKA 322 (376)
Q Consensus 313 LA~~~~g~~~ 322 (376)
++ +|+++
T Consensus 259 l~---~g~~~ 265 (306)
T 2jg5_A 259 IA---SGLSI 265 (306)
T ss_dssp HH---TTCCH
T ss_pred HH---cCCCH
Confidence 77 77765
No 25
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.30 E-value=2.2e-11 Score=116.04 Aligned_cols=151 Identities=13% Similarity=0.161 Sum_probs=102.4
Q ss_pred hhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCHH
Q 017155 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVN 236 (376)
Q Consensus 157 ~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~ 236 (376)
.+++++++.+.+.++.+|+++++... . .+.+.++++.+++.++++++||..... ...++++ .+++|+||..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~---~~~~~~~~~~a~~~~~~v~~D~~~~~~--~~~~ll~--~~dil~~N~~ 188 (304)
T 3ry7_A 118 TMTPEDVINAKDAIINADFVVAQLEV--P---IPAIISAFEIAKAHGVTTVLNPAPAKA--LPNELLS--LIDIIVPNET 188 (304)
T ss_dssp GCCHHHHHTTHHHHHTCSEEEEETTS--C---HHHHHHHHHHHHHTTCEEEEECCSCCC--CCHHHHT--TCSEECCBHH
T ss_pred cCCHHHHHHHHHHhccCCEEEEcCCC--C---HHHHHHHHHHHHHcCCEEEEeCCcccc--ccHHHHH--hCCEEecCHH
Confidence 45666666666667899999998543 2 245677778888889999999986421 1123442 3799999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHh
Q 017155 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLS 314 (376)
Q Consensus 237 E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA 314 (376)
|+..|+|.... +.++..+.++++.+.....+|+..|+ +.+++++++.+++.....+. .++|+||+|+|.+.+.+.
T Consensus 189 E~~~l~g~~~~---~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~ 265 (304)
T 3ry7_A 189 EAELLSGIKVT---NEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLN 265 (304)
T ss_dssp HHHHHHSCCCC---SHHHHHHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCC
T ss_pred HHHHHhCCCCC---ChhHHHHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHH
Confidence 99999986531 22456677888886543334444444 56777777666665332222 599999988777777777
Q ss_pred hhhcc-CCc
Q 017155 315 WARAK-GKA 322 (376)
Q Consensus 315 ~~~~g-~~~ 322 (376)
+| .++
T Consensus 266 ---~g~~~~ 271 (304)
T 3ry7_A 266 ---KSQDNL 271 (304)
T ss_dssp ---TTCTTH
T ss_pred ---cCCCCH
Confidence 77 765
No 26
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.29 E-value=1.1e-10 Score=112.82 Aligned_cols=150 Identities=11% Similarity=0.086 Sum_probs=97.4
Q ss_pred hhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCHHH
Q 017155 158 ISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNE 237 (376)
Q Consensus 158 ~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~E 237 (376)
++++.++...+.+..+|+++++..++ +.+..+++ +++.++++++||..........++++ .+++|+||..|
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~-a~~~~~~v~~D~~~~~~~~~~~~~l~--~~dil~~N~~E 192 (328)
T 3kzh_A 122 MNTDFIDSKREIFENAEYTVLDSDNP------EIMEYLLK-NFKDKTNFILDPVSAEKASWVKHLIK--DFHTIKPNRHE 192 (328)
T ss_dssp CCHHHHHHTHHHHHTCSEEEEESSCH------HHHHHHHH-HHTTTSEEEEECCSHHHHHTSTTTGG--GCSEECCBHHH
T ss_pred CCHHHHHHHHHhhccCCEEEEeCCcH------HHHHHHHH-HhhcCCcEEEEeCCHHHHHHHHHHhc--CCcEEeCCHHH
Confidence 45555666566778999999985432 34555565 66789999999985432111112222 27999999999
Q ss_pred HHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhh
Q 017155 238 YKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSW 315 (376)
Q Consensus 238 ~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~ 315 (376)
+..|+|.... +.++..+.++.+.+.....+|+..|+ +.+++++++.+++....... .++|+||+|+|.+.+.+.
T Consensus 193 ~~~l~g~~~~---~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~- 268 (328)
T 3kzh_A 193 AEILAGFPIT---DTDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYM- 268 (328)
T ss_dssp HHHHHTSCCC---SHHHHHHHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHH-
T ss_pred HHHHHCCCCC---CHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHH-
Confidence 9999986531 22456677788877532234444454 66777776666665433333 599999977766666666
Q ss_pred hhccCCc
Q 017155 316 ARAKGKA 322 (376)
Q Consensus 316 ~~~g~~~ 322 (376)
+|.++
T Consensus 269 --~g~~~ 273 (328)
T 3kzh_A 269 --NKMPI 273 (328)
T ss_dssp --TTCCH
T ss_pred --cCCCH
Confidence 77765
No 27
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.24 E-value=8.5e-11 Score=113.82 Aligned_cols=150 Identities=17% Similarity=0.168 Sum_probs=98.7
Q ss_pred hhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-ccccchhhhccCCCeeEcCCH
Q 017155 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNSIDLVSGYPLAVLTPNV 235 (376)
Q Consensus 157 ~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~~~~ll~~~~~~vITPN~ 235 (376)
.+++++++...+.++.+|+++++... .. +.+..+++.+++.++++++||.... .+. .+++. .+++||||.
T Consensus 139 ~l~~~~~~~~~~~l~~~~~v~~~~~~--~~---~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~--~~ll~--~~dil~~N~ 209 (331)
T 2fv7_A 139 LLNTEDLRAAANVISRAKVMVCQLEI--TP---ATSLEALTMARRSGVKTLFNPAPAIADLD--PQFYT--LSDVFCCNE 209 (331)
T ss_dssp GCCHHHHHHTHHHHHHCSEEEECSSS--CH---HHHHHHHHHHHHTTCEEEECCCSCCTTCC--THHHH--TCSEEEEEH
T ss_pred cCCHHHHHHHHHhhccCCEEEEecCC--CH---HHHHHHHHHHHHcCCEEEEeCCcccccch--HHHHh--cCCEEEeCH
Confidence 45666666555556789999997432 22 3566677777788999999998652 111 13443 378999999
Q ss_pred HHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCC--eEEEEeeCCCC-CCCCCchHHHHHHHH
Q 017155 236 NEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGE--IAKSVSIYGSP-RRCGGQGDILSGSVA 310 (376)
Q Consensus 236 ~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllK-G~-~~vi~~~~--~~~~i~~~g~~-~~t~GsGDvLaG~Ia 310 (376)
.|++.|+|.... +..+..+.++++.++. ...|++| |. +.++++++ +.+++...... ..++|+||+|+|.+.
T Consensus 210 ~Ea~~l~g~~~~---~~~~~~~~~~~l~~~g-~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~ 285 (331)
T 2fv7_A 210 SEAEILTGLTVG---SAADAGEAALVLLKRG-CQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALA 285 (331)
T ss_dssp HHHHHHHSSCCC---SHHHHHHHHHHHHTTT-CSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHH
T ss_pred HHHHHHhCCCCC---ChhHHHHHHHHHHHcC-CCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHH
Confidence 999999986421 2235666778887653 3345555 54 56666655 55555432222 259999998888887
Q ss_pred HHHhhhhcc--CCc
Q 017155 311 VFLSWARAK--GKA 322 (376)
Q Consensus 311 a~LA~~~~g--~~~ 322 (376)
+.++ +| .++
T Consensus 286 ~~l~---~g~~~~~ 296 (331)
T 2fv7_A 286 FYLA---YYPNLSL 296 (331)
T ss_dssp HHHH---HCTTSCH
T ss_pred HHHH---hCCCCCH
Confidence 7777 77 765
No 28
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.22 E-value=4.8e-10 Score=107.01 Aligned_cols=153 Identities=17% Similarity=0.178 Sum_probs=96.0
Q ss_pred hhhhhHHHHHHh---hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCC
Q 017155 158 ISSKILAEVDKW---MERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPN 234 (376)
Q Consensus 158 ~~~~~~~~l~~~---l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN 234 (376)
+++++++.+.+. ++.+|++++...++.. ...+.+.++++.+++.++++++||.+..+ .++++. .+++++||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~l~~-~~dil~~N 181 (306)
T 2abq_A 108 IKKEHVQALLEQLTELEKGDVLVLAGSVPQA-MPQTIYRSMTQIAKERGAFVAVDTSGEAL----HEVLAA-KPSFIKPN 181 (306)
T ss_dssp CCHHHHHHHHHHHTTCCTTCEEEEESCCCTT-SCTTHHHHHHHHHHTTTCEEEEECCHHHH----HHHGGG-CCSEECCB
T ss_pred CCHHHHHHHHHHHHhccCCCEEEEecCCCCC-CCHHHHHHHHHHHHhcCCEEEEECChHHH----HHHHhc-CCcEEecC
Confidence 344444444322 4689999885333321 11235667778888889999999985321 233431 47899999
Q ss_pred HHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHH
Q 017155 235 VNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVF 312 (376)
Q Consensus 235 ~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~ 312 (376)
..|+..|+|.... +.++..+.++++.+.....+|+..|+ +.+++++++.+++.....+. .++|+||+|+|.+.+.
T Consensus 182 ~~E~~~l~g~~~~---~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~ 258 (306)
T 2abq_A 182 HHELSELVSKPIA---SIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAA 258 (306)
T ss_dssp HHHHHHHHTSCCC---SHHHHHHHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCC---CHHHHHHHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHH
Confidence 9999999986421 22355667788877532234444454 66667777666664322222 5999999877777666
Q ss_pred HhhhhccCCc
Q 017155 313 LSWARAKGKA 322 (376)
Q Consensus 313 LA~~~~g~~~ 322 (376)
+. +|+++
T Consensus 259 l~---~g~~~ 265 (306)
T 2abq_A 259 LQ---EGKSL 265 (306)
T ss_dssp HH---TTCCH
T ss_pred HH---cCCCH
Confidence 76 77765
No 29
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.18 E-value=7.2e-10 Score=105.80 Aligned_cols=142 Identities=19% Similarity=0.246 Sum_probs=92.1
Q ss_pred HhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCC-eeEcCCHHHHHHHhcccc
Q 017155 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPL-AVLTPNVNEYKRLVQKVL 246 (376)
Q Consensus 168 ~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~-~vITPN~~E~~~L~g~~~ 246 (376)
+.++. |++++...++.. ...+.+.++++.+++.++++++||.+..+ .+.+. ..+ ++|+||..|++.|+|...
T Consensus 127 ~~~~~-~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~l~-~~~~dil~~N~~E~~~l~g~~~ 199 (309)
T 3cqd_A 127 EIESG-AILVISGSLPPG-VKLEKLTQLISAAQKQGIRCIVDSSGEAL----SAALA-IGNIELVKPNQKELSALVNREL 199 (309)
T ss_dssp TSCTT-CEEEEESCCCTT-CCHHHHHHHHHHHHTTTCEEEEECCHHHH----HHHTT-TCCBSEECCBHHHHHHHHTSCC
T ss_pred HhhcC-CEEEEECCCCCC-CCHHHHHHHHHHHHHcCCeEEEECChHHH----HHHHH-hCCCEEEeeCHHHHHHHhCCCC
Confidence 34567 998886434322 12346777888888889999999985421 12221 236 899999999999998642
Q ss_pred cCCCCCCcHHHHHHHHHHhh-CCeEEEEcCC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 247 NCEVNDRDAPELLQSLAKQI-GGVTILQKGK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 247 ~~~v~~~d~~~~a~~la~~~-~~~vVllKG~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
. +.++..+.++++.+.. ...+|+..|+ +.+++++++.+++...... ..++|+||+|+|.+.+.+. +|.++
T Consensus 200 ~---~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~---~g~~~ 272 (309)
T 3cqd_A 200 T---QPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLA---ENASL 272 (309)
T ss_dssp C---STTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred C---CHHHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHH---cCCCH
Confidence 1 2346667788887753 2234444454 6677766666656432222 2599999988777776676 77765
No 30
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.18 E-value=9.8e-10 Score=107.74 Aligned_cols=143 Identities=17% Similarity=0.247 Sum_probs=93.9
Q ss_pred HHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCHHHHHHHh
Q 017155 163 LAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNEYKRLV 242 (376)
Q Consensus 163 ~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~E~~~L~ 242 (376)
.+.+.+.++.+|+++++ |+.... .+.+.++++.+++.++++++||.+.. . +++ ..+++|+||..|++.|+
T Consensus 177 ~~~~~~~l~~~~~v~~~-g~~~~~--~~~~~~~~~~a~~~g~~v~~D~~~~~-~----~~l--~~~dil~pN~~Ea~~l~ 246 (352)
T 4e84_A 177 LARFDVLLPQHDVVLMS-DYAKGG--LTHVTTMIEKARAAGKAVLVDPKGDD-W----ARY--RGASLITPNRAELREVV 246 (352)
T ss_dssp HHHHHHHGGGCSEEEEE-CCSSSS--CSSHHHHHHHHHHTTCEEEEECCSSC-C----STT--TTCSEECCBHHHHHHHH
T ss_pred HHHHHHhcccCCEEEEe-CCCCCC--HHHHHHHHHHHHhcCCEEEEECCCcc-h----hhc--cCCcEEcCCHHHHHHHh
Confidence 44555667899999996 121100 01255667777888999999997631 1 122 13799999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCC-eEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhcc
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQIGG-VTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAK 319 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~~~~-~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~g 319 (376)
| ... +.++..+.++++.++.+. .+|+..|+ +.+++++++.+++....... .++|+||+|.|.+.+.++ +|
T Consensus 247 g-~~~---~~~~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~---~g 319 (352)
T 4e84_A 247 G-QWK---SEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLG---AG 319 (352)
T ss_dssp C-CCS---SHHHHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHH---TT
T ss_pred C-CCC---CHHHHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHH---cC
Confidence 8 221 234667788888765443 34444454 67777777777665432222 599999977776666666 77
Q ss_pred CCc
Q 017155 320 GKA 322 (376)
Q Consensus 320 ~~~ 322 (376)
.++
T Consensus 320 ~~l 322 (352)
T 4e84_A 320 VPL 322 (352)
T ss_dssp CCH
T ss_pred CCH
Confidence 765
No 31
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.16 E-value=7.4e-10 Score=107.26 Aligned_cols=142 Identities=12% Similarity=0.053 Sum_probs=95.3
Q ss_pred HhhccCCEEEEc---CCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-ccccc---hhhhcc-C-CCeeEcCCHHHH
Q 017155 168 KWMERFDCLVVG---PGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-Y-PLAVLTPNVNEY 238 (376)
Q Consensus 168 ~~l~~~davvIG---pGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~~---~~ll~~-~-~~~vITPN~~E~ 238 (376)
+.++.+|+++++ +++. ++...+.+.++++.+++.++++++||+.-. +.... .+.++. . ..++||||..|+
T Consensus 141 ~~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~ 219 (328)
T 4e69_A 141 AAMARADVVYFSGITLAIL-DQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDE 219 (328)
T ss_dssp HHHTTCSEEEEEHHHHHTS-CHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHH
T ss_pred HHhcCCCEEEECCchhhcc-CchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHH
Confidence 557889999997 3332 345567788888888888999999997432 21110 111111 2 379999999999
Q ss_pred HHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEeeCC-C-CCCCCCchHHHHHHHHHHHh
Q 017155 239 KRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIYG-S-PRRCGGQGDILSGSVAVFLS 314 (376)
Q Consensus 239 ~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllK-G~-~~vi~~~~~~~~i~~~g-~-~~~t~GsGDvLaG~Iaa~LA 314 (376)
+.|+|.+ +..+.++.|.+.. ...|++| |+ +.+++++++.+++.... . ...++|+||+|+|.+.+.++
T Consensus 220 ~~l~g~~--------~~~~~~~~l~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~ 290 (328)
T 4e69_A 220 AAWFGDA--------GPDATADRYARAG-VRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVL 290 (328)
T ss_dssp HHHHTCS--------SHHHHHHHHHTTT-CSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHH
T ss_pred HHHcCCC--------CHHHHHHHHHhcC-CCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHH
Confidence 9998742 4566777777643 3344445 44 56777777766665322 2 23599999988887777777
Q ss_pred hhhccCCc
Q 017155 315 WARAKGKA 322 (376)
Q Consensus 315 ~~~~g~~~ 322 (376)
+|.++
T Consensus 291 ---~g~~l 295 (328)
T 4e69_A 291 ---AGQPL 295 (328)
T ss_dssp ---TTCCH
T ss_pred ---CCCCH
Confidence 78765
No 32
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.16 E-value=3.9e-10 Score=109.01 Aligned_cols=175 Identities=11% Similarity=0.045 Sum_probs=111.4
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccc-cccc------hhhhccCCCeeEcCCHHHHHHH
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFL-VTNS------IDLVSGYPLAVLTPNVNEYKRL 241 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~l-l~~~------~~ll~~~~~~vITPN~~E~~~L 241 (376)
.++.+|+++++.-+..++...+.+.++++.+++.++++++||..... .... .++++ .+++|+||..|+..|
T Consensus 127 ~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l 204 (330)
T 3iq0_A 127 ILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLE--LTDIYMPSEGEVLLL 204 (330)
T ss_dssp GGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHH--TCSEECCBGGGTTTT
T ss_pred HhccCCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHh--hCCEEecCHHHHHHH
Confidence 46788999997333345556677888898888899999999986531 1110 12222 379999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhcc
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAK 319 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~g 319 (376)
+|. .+..+.++.|.+.....+|+..|+ +.+++++++.+++....... .++|+||+|+|.+.+.+. +|
T Consensus 205 ~g~--------~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~---~g 273 (330)
T 3iq0_A 205 SPH--------STPERAIAGFLEEGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQ---LG 273 (330)
T ss_dssp CSC--------SSHHHHHHHHHHHTCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHH---TT
T ss_pred hCC--------CCHHHHHHHHHHcCCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHH---cC
Confidence 864 245667788877543344444454 67777777666665332222 599999977777766677 78
Q ss_pred CCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCCC--C-CcHHHHHHHHHHH
Q 017155 320 GKATTSQMNPTVLGCIAGSALLRKAASLAFKDKKR--S-TLTTDIIECLGRS 368 (376)
Q Consensus 320 ~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~--~-~~a~dii~~l~~~ 368 (376)
.++ ..|+..|. .+|.....+.|. + ....++.+.+.+.
T Consensus 274 ~~~--------~~a~~~A~----~~aa~~v~~~G~~~~~p~~~ev~~~~~~~ 313 (330)
T 3iq0_A 274 FDA--------HRALQYAN----ACGALAVTRRGPMEGTSRLMEIETFIQRH 313 (330)
T ss_dssp CCH--------HHHHHHHH----HHHHHHTTSCSSSTTCCCHHHHHHHHHHC
T ss_pred CCH--------HHHHHHHH----HHHHHHHcCcCCCCCCCCHHHHHHHHHhc
Confidence 765 34444443 344454444432 3 3456666655543
No 33
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.16 E-value=3.7e-10 Score=108.56 Aligned_cols=149 Identities=13% Similarity=0.088 Sum_probs=91.1
Q ss_pred hhhhhHHHHH--HhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCH
Q 017155 158 ISSKILAEVD--KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNV 235 (376)
Q Consensus 158 ~~~~~~~~l~--~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~ 235 (376)
++++.++... +.+..+|+++++..+. .+.+..+++.+++.++++++||..........++++ .+++||||.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~ll~--~~dil~~N~ 190 (317)
T 2nwh_A 118 FTPRRLKVRAVREAIIASDFLLCDANLP-----EDTLTALGLIARACEKPLAAIAISPAKAVKLKAALG--DIDILFMNE 190 (317)
T ss_dssp CCHHHHTSHHHHHHHHHCSEEEEETTSC-----HHHHHHHHHHHHHTTCCEEEECCSHHHHGGGTTTGG--GCSEEEEEH
T ss_pred CCHHHhhhhhhhhHhccCCEEEEeCCCC-----HHHHHHHHHHHHhcCCeEEEeCCCHHHHHHHHHHhh--hCeEecCCH
Confidence 4444444333 5567899999974332 235667777788889999999986422111112221 278999999
Q ss_pred HHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCC-eEEEEeeCCCC-CCCCCchHHHHHHHHHH
Q 017155 236 NEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGE-IAKSVSIYGSP-RRCGGQGDILSGSVAVF 312 (376)
Q Consensus 236 ~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~-~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~ 312 (376)
.|+..|+|.+ ..+..+.++.+.+.....+|+..|. +.++++++ ..+++...... ..++|+||+|+|.+.+.
T Consensus 191 ~E~~~l~g~~------~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~ 264 (317)
T 2nwh_A 191 AEARALTGET------AENVRDWPNILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAA 264 (317)
T ss_dssp HHHHHHHC-----------CTTHHHHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHH
T ss_pred HHHHHHhCCC------hhHHHHHHHHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHH
Confidence 9999999852 1223345667766532234444454 66666655 34545422222 25999999888777777
Q ss_pred HhhhhccCCc
Q 017155 313 LSWARAKGKA 322 (376)
Q Consensus 313 LA~~~~g~~~ 322 (376)
+. +|.++
T Consensus 265 l~---~g~~~ 271 (317)
T 2nwh_A 265 IA---EGKTI 271 (317)
T ss_dssp HH---TTCCH
T ss_pred HH---cCCCH
Confidence 77 78765
No 34
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.15 E-value=3.2e-10 Score=110.14 Aligned_cols=143 Identities=12% Similarity=0.054 Sum_probs=90.0
Q ss_pred hhccCCEEEEcC-CCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccc-cccc---hhhhcc-C-CCeeEcCCHHHHHHH
Q 017155 169 WMERFDCLVVGP-GLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFL-VTNS---IDLVSG-Y-PLAVLTPNVNEYKRL 241 (376)
Q Consensus 169 ~l~~~davvIGp-Gl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~l-l~~~---~~ll~~-~-~~~vITPN~~E~~~L 241 (376)
.++.+|++.++. ....++...+.+.++++.+++.++++++||..... .... .+.+.. . .+++||||..|++.|
T Consensus 149 ~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l 228 (336)
T 4du5_A 149 WLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFL 228 (336)
T ss_dssp HHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHH
T ss_pred HhccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHH
Confidence 456788888652 11124445667788888888889999999973211 1110 111111 2 379999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC--CCCCCchHHHHHHHHHHHhhhhc
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP--RRCGGQGDILSGSVAVFLSWARA 318 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~--~~t~GsGDvLaG~Iaa~LA~~~~ 318 (376)
+|.. +..+.++.+.+.....+|+..|. +.+++++++.+++.....+ ..++|+||+|+|.+.+.++ +
T Consensus 229 ~g~~--------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~---~ 297 (336)
T 4du5_A 229 TGET--------TPEGVARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALL---D 297 (336)
T ss_dssp HCCC--------SHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHH---T
T ss_pred hCCC--------CHHHHHHHHHhcCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHH---c
Confidence 9742 45667788877543234443343 5677777777666543333 3599999988877777777 7
Q ss_pred cCCc
Q 017155 319 KGKA 322 (376)
Q Consensus 319 g~~~ 322 (376)
|+++
T Consensus 298 g~~l 301 (336)
T 4du5_A 298 GLGV 301 (336)
T ss_dssp TCCH
T ss_pred CCCH
Confidence 8765
No 35
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.15 E-value=1.6e-10 Score=112.26 Aligned_cols=151 Identities=10% Similarity=-0.025 Sum_probs=95.9
Q ss_pred HHhhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-cccc---------chhhhccCCCeeEcCCH
Q 017155 167 DKWMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTN---------SIDLVSGYPLAVLTPNV 235 (376)
Q Consensus 167 ~~~l~~~davvIGpGl~-~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~---------~~~ll~~~~~~vITPN~ 235 (376)
.+.++.+|+++++.-++ .++...+.+.++++.+++.++++++||..-. +... ..++++ .++||+||.
T Consensus 124 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~--~~dil~~N~ 201 (346)
T 3ktn_A 124 EAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILP--YCDIVFGSR 201 (346)
T ss_dssp HHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGG--GCSEEECCH
T ss_pred HHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHH--hCCEEEccH
Confidence 34567899999962111 2455567788889988889999999996322 1111 012232 279999999
Q ss_pred HHHHHHhccc-ccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-c-------eEEEcCCeEEEEeeCCCC-CCCCCchHH
Q 017155 236 NEYKRLVQKV-LNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-S-------DLISDGEIAKSVSIYGSP-RRCGGQGDI 304 (376)
Q Consensus 236 ~E~~~L~g~~-~~~~v~~~d~~~~a~~la~~~~~~vVllK-G~-~-------~vi~~~~~~~~i~~~g~~-~~t~GsGDv 304 (376)
.|++.|+|.. .....+.++..+.+++|.++++...|+++ |. + .+++++++.+++.....+ ..++|+||+
T Consensus 202 ~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDa 281 (346)
T 3ktn_A 202 RDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDA 281 (346)
T ss_dssp HHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHH
T ss_pred HHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHH
Confidence 9999999864 11000113567778888876443344444 54 3 677776665555422222 359999997
Q ss_pred HHHHHHHHHhhhhccCCc
Q 017155 305 LSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 305 LaG~Iaa~LA~~~~g~~~ 322 (376)
|+|.+.+.+. +|.++
T Consensus 282 F~ag~~~~l~---~g~~l 296 (346)
T 3ktn_A 282 YAAGILYGYS---QNWSL 296 (346)
T ss_dssp HHHHHHHHHH---TTCCH
T ss_pred HHHHHHHHHH---cCCCH
Confidence 7777666666 77765
No 36
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.14 E-value=7.4e-10 Score=106.74 Aligned_cols=145 Identities=17% Similarity=0.209 Sum_probs=91.8
Q ss_pred HhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhcc-CCCeeEcCCHHHHHHHhcccc
Q 017155 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-YPLAVLTPNVNEYKRLVQKVL 246 (376)
Q Consensus 168 ~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~-~~~~vITPN~~E~~~L~g~~~ 246 (376)
+.++.+|++++...++... ..+.+.++++.+++.++++++||++..+ .+++.. ..+++|+||..|++.|+|...
T Consensus 125 ~~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~a~~~g~~v~~Dp~~~~~----~~~l~~~~~~dil~~N~~E~~~l~g~~~ 199 (323)
T 2f02_A 125 QLIKQAEIVTISGSLAKGL-PSDFYQELVQKAHAQEVKVLLDTSGDSL----RQVLQGPWKPYLIKPNLEELEGLLGQDF 199 (323)
T ss_dssp HHHTTCSEEEEESCCCBTS-CTTHHHHHHHHHHHTTCEEEEECCTHHH----HHHHHSSCCCSEECCBHHHHHHHHTCCC
T ss_pred HhccCCCEEEEECCCCCCC-ChHHHHHHHHHHHHCCCEEEEECChHHH----HHHHhccCCCeEEecCHHHHHHHhCCCC
Confidence 4567899999853343211 1235667777788889999999986321 223321 137899999999999998642
Q ss_pred cCCCCC-CcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 247 NCEVND-RDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 247 ~~~v~~-~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
. .+. ++..+.++++.+.....+|+..|+ +.+++++++.+++....... .++|+||+|+|.+.+.++ +|.++
T Consensus 200 ~--~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~---~g~~~ 273 (323)
T 2f02_A 200 S--ENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLA---KDAPA 273 (323)
T ss_dssp C--SSCHHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred C--CCcHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHH---cCCCH
Confidence 1 011 245566677766432234444454 66777777666665322222 599999988777777777 77765
No 37
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.12 E-value=3.3e-10 Score=108.89 Aligned_cols=153 Identities=14% Similarity=0.142 Sum_probs=99.1
Q ss_pred hhhhhHHHHHHhhccCCEEEEcC---CCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-ccccc---hhhhcc-C-CC
Q 017155 158 ISSKILAEVDKWMERFDCLVVGP---GLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-Y-PL 228 (376)
Q Consensus 158 ~~~~~~~~l~~~l~~~davvIGp---Gl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~~---~~ll~~-~-~~ 228 (376)
+++++++++.+.++.+|+++++. +. .++...+.+.++++.+++.++++++||.... +.... .+.++. . ..
T Consensus 115 ~~~~~~~~~~~~l~~~~~v~~~g~~~~~-l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~ 193 (319)
T 3lhx_A 115 LASEQSAAICEELANFDYLYLSGISLAI-LSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECT 193 (319)
T ss_dssp TSSSSHHHHHHHHTTCSEEEEEHHHHHT-SCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTC
T ss_pred cCccchhhHHHHhcCCCEEEEcCchhhh-cCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhC
Confidence 44455666667788999999972 11 1344567788888888888999999997532 21111 111111 2 27
Q ss_pred eeEcCCHHHHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEE-EEeeC---C-CCCCCCCch
Q 017155 229 AVLTPNVNEYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAK-SVSIY---G-SPRRCGGQG 302 (376)
Q Consensus 229 ~vITPN~~E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~-~i~~~---g-~~~~t~GsG 302 (376)
++++||..|++.|+|. .+..+.++++.+.....+|+..|. +.+++++++.+ ++... . ....++|+|
T Consensus 194 di~~~n~~E~~~l~g~--------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAG 265 (319)
T 3lhx_A 194 DIAFLTLDDEDALWGQ--------QPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAG 265 (319)
T ss_dssp SEEEEEHHHHHHHHCC--------CCHHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHH
T ss_pred CcccCCHHHHHHHhCC--------CCHHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCcc
Confidence 9999999999999874 245667788876533234444454 56666655433 45422 1 123599999
Q ss_pred HHHHHHHHHHHhhhhccCCc
Q 017155 303 DILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 303 DvLaG~Iaa~LA~~~~g~~~ 322 (376)
|+|+|.+.+.++ +|.++
T Consensus 266 Daf~a~~~~~l~---~g~~~ 282 (319)
T 3lhx_A 266 DSFSAGYLAVRL---TGGSA 282 (319)
T ss_dssp HHHHHHHHHHHT---TTCCH
T ss_pred HHHHHHHHHHHH---cCCCH
Confidence 988877777777 78765
No 38
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.11 E-value=1.4e-09 Score=104.46 Aligned_cols=144 Identities=17% Similarity=0.200 Sum_probs=91.6
Q ss_pred hhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCHHH
Q 017155 158 ISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNE 237 (376)
Q Consensus 158 ~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~E 237 (376)
+++++++ .+.++.+|+++++...+ . +.+.++ +++.++++++||.....+. .++++ .+++||||..|
T Consensus 128 l~~~~~~--~~~~~~~~~v~~~~~~~--~---~~~~~~---a~~~~~~v~~Dp~~~~~~~--~~ll~--~~dil~~N~~E 193 (311)
T 1vm7_A 128 LKKELID--WNTLSESDILLLQNEIP--F---ETTLEC---AKRFNGIVIFDPAPAQGIN--EEIFQ--YLDYLTPNEKE 193 (311)
T ss_dssp CCGGGCC--HHHHTTCSEEEECSSSC--H---HHHHHH---HHHCCSEEEECCCSCTTCC--GGGGG--GCSEECCBHHH
T ss_pred CCHHHhC--hhhcccCCEEEEeCCCC--H---HHHHHH---HHHcCCEEEEeCcchhhhh--HHHHh--hCCEEeCCHHH
Confidence 4444433 23457899999974332 2 222222 5567899999998632111 12332 27899999999
Q ss_pred HHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHHHHHHHHHh
Q 017155 238 YKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILSGSVAVFLS 314 (376)
Q Consensus 238 ~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllK-G~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA 314 (376)
++.|+|.+.. +.++..+.++++.+... ..|++| |. +.+++++++.+++...... ..++|+||+|+|.+.+.++
T Consensus 194 ~~~l~g~~~~---~~~~~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~ 269 (311)
T 1vm7_A 194 IEALSKDFFG---EFLTVEKAAEKFLELGV-KNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALS 269 (311)
T ss_dssp HHHHHHHHHS---CCCCHHHHHHHHHHTTC-SEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCC---ChhHHHHHHHHHHHcCC-CEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHH
Confidence 9999986431 23467778888887643 344445 54 5666677766656532222 2599999988887777777
Q ss_pred hhhccCCc
Q 017155 315 WARAKGKA 322 (376)
Q Consensus 315 ~~~~g~~~ 322 (376)
+|.++
T Consensus 270 ---~g~~~ 274 (311)
T 1vm7_A 270 ---EGKNP 274 (311)
T ss_dssp ---TTCCH
T ss_pred ---CCCCH
Confidence 78765
No 39
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.10 E-value=5.1e-10 Score=109.60 Aligned_cols=172 Identities=16% Similarity=0.109 Sum_probs=108.3
Q ss_pred HhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc----hhhhccCCCeeEcCCHHHHHHHhc
Q 017155 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSGYPLAVLTPNVNEYKRLVQ 243 (376)
Q Consensus 168 ~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~----~~ll~~~~~~vITPN~~E~~~L~g 243 (376)
+.++.+|++++..-+...+...+.+.++++.+++.++++++|+......... .++++....++|+||..|++.|+|
T Consensus 167 ~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g 246 (352)
T 4e3a_A 167 DVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ 246 (352)
T ss_dssp HHHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT
T ss_pred HHHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC
Confidence 3467899999863222223345678888888888999999999754322111 123321137999999999999987
Q ss_pred ccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC--CCCCCchHHHHHHHHHHHhhhhccC
Q 017155 244 KVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP--RRCGGQGDILSGSVAVFLSWARAKG 320 (376)
Q Consensus 244 ~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~--~~t~GsGDvLaG~Iaa~LA~~~~g~ 320 (376)
.. +..++++.+.+... .+|+..|+ +.+++++++.+++...... ..++|+||+|+|.+.+.++ +|+
T Consensus 247 ~~--------~~~~a~~~l~~~~~-~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~---~g~ 314 (352)
T 4e3a_A 247 TD--------DFEEALNRIAADCK-IAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYT---QGR 314 (352)
T ss_dssp CS--------CHHHHHHHHHHHSS-EEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHH---TTC
T ss_pred CC--------CHHHHHHHHhcCCC-EEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHH---cCC
Confidence 42 44566777776544 44554554 6777787777777643332 2599999988777777777 787
Q ss_pred CcccCCCChhHHHHHHHHHHHHHHHHHHhhcCC--CCCcHHHHHH
Q 017155 321 KATTSQMNPTVLGCIAGSALLRKAASLAFKDKK--RSTLTTDIIE 363 (376)
Q Consensus 321 ~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~--~~~~a~dii~ 363 (376)
++ ..|+..|. .+|.....+.| +..-..++++
T Consensus 315 ~l--------~~a~~~A~----~aAa~~v~~~G~~~~~~~~~~~~ 347 (352)
T 4e3a_A 315 SL--------EDCGKLGC----LAAGIVIQQIGPRPMTSLSEAAK 347 (352)
T ss_dssp CH--------HHHHHHHH----HHHHHHTTSSSSSCSSCHHHHHH
T ss_pred CH--------HHHHHHHH----HHHHHHHcCCCCCCCcCHHHHHH
Confidence 65 34444443 34444444443 4444555544
No 40
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.10 E-value=3.7e-10 Score=109.44 Aligned_cols=140 Identities=13% Similarity=0.073 Sum_probs=84.3
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccc-cc---cchhhhcc-C-CCeeEcCCHHHHHHHh
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFL-VT---NSIDLVSG-Y-PLAVLTPNVNEYKRLV 242 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~l-l~---~~~~ll~~-~-~~~vITPN~~E~~~L~ 242 (376)
.++.+|++.++.+...++...+.+.++++.+++.++++++||..... .. ...+.+.. . .++|||||..|++.|+
T Consensus 126 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~ 205 (338)
T 3ljs_A 126 SFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLA 205 (338)
T ss_dssp HHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHH
T ss_pred HhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHh
Confidence 45678999987544456666788889999998899999999964321 10 00111111 1 3799999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHh
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLS 314 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA 314 (376)
|... . +..+.+++|.+.....+|+..|. +.+++++++.+++.....+. .++|+||+|+|.+.+.++
T Consensus 206 g~~~---~---~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~ 273 (338)
T 3ljs_A 206 NTLA---A---DANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFA 273 (338)
T ss_dssp HHHT---S---CHHHHHHHHTTTTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHH
T ss_pred CCCC---h---hHHHHHHHHHhcCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHH
Confidence 8641 1 11236677766432234444454 66777776666665322222 499999977776666666
No 41
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.09 E-value=1.1e-09 Score=106.07 Aligned_cols=145 Identities=16% Similarity=0.247 Sum_probs=90.9
Q ss_pred HhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhcc-CCCeeEcCCHHHHHHHhcccc
Q 017155 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-YPLAVLTPNVNEYKRLVQKVL 246 (376)
Q Consensus 168 ~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~-~~~~vITPN~~E~~~L~g~~~ 246 (376)
+.++.+|++++...++.. ...+.+.++++.+++.++++++||.+..+ .+++.. ..+++|+||..|+..|+|...
T Consensus 143 ~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~l----~~~l~~~~~~dil~~N~~E~~~l~g~~~ 217 (330)
T 2jg1_A 143 QMMEKVEAVAISGSLPKG-LNQDYYAQIIERCQNKGVPVILDCSGATL----QTVLENPYKPTVIKPNISELYQLLNQPL 217 (330)
T ss_dssp HHGGGCSEEEEESCCCBT-SCTTHHHHHHHHHHTTTCCEEEECCHHHH----HHHHTSSSCCSEECCBHHHHHHHTTSCC
T ss_pred HhcCCCCEEEEECCCCCC-CCHHHHHHHHHHHHHCCCEEEEECCcHHH----HHHHhccCCceEEEeCHHHHHHHhCCCC
Confidence 446789999985333321 11235667788888889999999985321 233321 147899999999999998642
Q ss_pred cCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 247 NCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 247 ~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
. .+.++..+.++++.++....+|+..|+ +.+++++++.+++...... ..++|+||+|+|.+.+.+. +|.++
T Consensus 218 ~--~~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~---~g~~l 290 (330)
T 2jg1_A 218 D--ESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAIL---NHEND 290 (330)
T ss_dssp C--CCHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred C--CCHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHH---cCCCH
Confidence 1 011345566677766432234443354 6677777766666532222 2599999977766666666 77765
No 42
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.07 E-value=5.6e-09 Score=101.79 Aligned_cols=133 Identities=17% Similarity=0.234 Sum_probs=88.6
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchh-hhccCCCeeEcCCHHHHHHHhccccc
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSID-LVSGYPLAVLTPNVNEYKRLVQKVLN 247 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~-ll~~~~~~vITPN~~E~~~L~g~~~~ 247 (376)
.++.+|+++++.-+ . +.+.++++.+++.++++++||.... ....+ +++ .+++|+||..|+..|+|..
T Consensus 154 ~l~~~~~v~~~~~~---~---~~~~~~~~~a~~~g~~v~~Dp~~~~--~~~~~~ll~--~~dil~~N~~Ea~~l~g~~-- 221 (343)
T 2rbc_A 154 DIALFDAVLVDVRW---P---ELALDVLTVARALGKPAILDGDVAP--VETLEGLAP--AATHIVFSEPAATRLTGLE-- 221 (343)
T ss_dssp HHTTCSEEEECSSS---H---HHHHHHHHHHHHTTCCEEEEECSCC--HHHHHHHGG--GCSEEEEEHHHHHHHHCCS--
T ss_pred hhCCCCEEEEcCCC---H---HHHHHHHHHHHHCCCEEEEECCccc--cccHHHHHh--cCCEEEeCHHHHHHHcCCC--
Confidence 45789999997432 2 2466777777888999999997532 11112 332 2789999999999998742
Q ss_pred CCCCCCcHHHHHHHHHHhhC-CeEEEEcCC-ceEEEcCC--eEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 248 CEVNDRDAPELLQSLAKQIG-GVTILQKGK-SDLISDGE--IAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 248 ~~v~~~d~~~~a~~la~~~~-~~vVllKG~-~~vi~~~~--~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
+..+.++.+.+... ..+|+..|. +.++++++ +.+++....... .++|+||+|+|.+.+.++ +|.++
T Consensus 222 ------~~~~~~~~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~---~g~~~ 292 (343)
T 2rbc_A 222 ------TVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMA---EGMQS 292 (343)
T ss_dssp ------SHHHHHHHHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred ------CHHHHHHHHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHH---cCCCH
Confidence 45667778877532 244444454 66777665 566665322222 599999988777777777 77765
No 43
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.07 E-value=6.5e-10 Score=109.60 Aligned_cols=146 Identities=13% Similarity=0.077 Sum_probs=96.2
Q ss_pred HHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc----hhhhccCCCeeEcCCHHHHHHHh
Q 017155 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSGYPLAVLTPNVNEYKRLV 242 (376)
Q Consensus 167 ~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~----~~ll~~~~~~vITPN~~E~~~L~ 242 (376)
.+.++.+|+++++. .... ...+.+.++++.+++.++++++|+.+....... .++++ ..++|+||..|++.|+
T Consensus 173 ~~~~~~~~~v~~~g-~~~~-~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~--~~dil~~N~~Ea~~l~ 248 (370)
T 3vas_A 173 WSLVEKAQVYYIAG-FVIN-TCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS--YSNIVFGNESEAEAYG 248 (370)
T ss_dssp HHHHHHCSEEEEEG-GGHH-HHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT--TCSEEEEEHHHHHHHH
T ss_pred HHHHhhCCEEEEEe-eecc-CCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh--hCCEEEcCHHHHHHHh
Confidence 45567899999962 2111 234677888888888999999999753221111 12332 3789999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHh-------hCCeEEEEcCC-ceEEEc--CCeEEEEeeCCC---C-CCCCCchHHHHHH
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQ-------IGGVTILQKGK-SDLISD--GEIAKSVSIYGS---P-RRCGGQGDILSGS 308 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~-------~~~~vVllKG~-~~vi~~--~~~~~~i~~~g~---~-~~t~GsGDvLaG~ 308 (376)
|.... +..+..+.++++.+. ....+|+..|. +.++++ +++.+++..... . ..++|+||+|+|.
T Consensus 249 g~~~~---~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag 325 (370)
T 3vas_A 249 EVHGL---LEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAG 325 (370)
T ss_dssp HHTTC---CSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHH
T ss_pred cccCC---CccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHH
Confidence 86421 235677888888873 22234444455 677777 666666653332 2 2599999987777
Q ss_pred HHHHHhhhhccCCc
Q 017155 309 VAVFLSWARAKGKA 322 (376)
Q Consensus 309 Iaa~LA~~~~g~~~ 322 (376)
+.+.++ +|+++
T Consensus 326 ~l~~l~---~g~~l 336 (370)
T 3vas_A 326 FIADYI---RGKPM 336 (370)
T ss_dssp HHHHHT---TTCCH
T ss_pred HHHHHH---CCCCH
Confidence 777677 78765
No 44
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.06 E-value=4.9e-10 Score=109.09 Aligned_cols=152 Identities=12% Similarity=0.067 Sum_probs=93.1
Q ss_pred HhhccCCEEEEcCCCCC-CHHHHHHHHHHHHHhhcCCCCEEEeCCccc-cccc--chhhhcc-CC-CeeEcCCHHHHHHH
Q 017155 168 KWMERFDCLVVGPGLGR-DPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTN--SIDLVSG-YP-LAVLTPNVNEYKRL 241 (376)
Q Consensus 168 ~~l~~~davvIGpGl~~-~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~--~~~ll~~-~~-~~vITPN~~E~~~L 241 (376)
.+++.+|++.++..++. ++...+.+.++++.+++.++++++||.... +... ..+.+.. .+ .++|+||..|+..|
T Consensus 134 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l 213 (351)
T 2afb_A 134 KILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKV 213 (351)
T ss_dssp HHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHH
T ss_pred HhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHH
Confidence 34578999999743321 333456777888888888999999998532 1110 0111111 22 78999999999999
Q ss_pred hcccccC---C---CCCCcHHHHHHHHHHhhCCeEEEEc-CC-c--------eEEEcCCeEEEEeeCCC-CCCCCCchHH
Q 017155 242 VQKVLNC---E---VNDRDAPELLQSLAKQIGGVTILQK-GK-S--------DLISDGEIAKSVSIYGS-PRRCGGQGDI 304 (376)
Q Consensus 242 ~g~~~~~---~---v~~~d~~~~a~~la~~~~~~vVllK-G~-~--------~vi~~~~~~~~i~~~g~-~~~t~GsGDv 304 (376)
+|..... + .+.++..+.++++.++++...|++| |. + .+++++++.+++..... ...++|+||+
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDa 293 (351)
T 2afb_A 214 LGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDS 293 (351)
T ss_dssp HCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHH
T ss_pred hCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHH
Confidence 9864210 0 0112456677888776454345555 54 2 36666666554432111 2359999998
Q ss_pred HHHHHHHHHhhhhccCCc
Q 017155 305 LSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 305 LaG~Iaa~LA~~~~g~~~ 322 (376)
|+|.+.+.+. +|+++
T Consensus 294 F~ag~~~~l~---~g~~l 308 (351)
T 2afb_A 294 FAGALIYGSL---MGFDS 308 (351)
T ss_dssp HHHHHHHHHH---HTCCH
T ss_pred HHHHHHHHHH---cCCCH
Confidence 7777777777 77765
No 45
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.06 E-value=6.2e-10 Score=106.90 Aligned_cols=141 Identities=18% Similarity=0.252 Sum_probs=90.5
Q ss_pred HHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCHHHHHHHhccc
Q 017155 166 VDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNEYKRLVQKV 245 (376)
Q Consensus 166 l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~E~~~L~g~~ 245 (376)
+.+.++.+|++++..-++.. ...+.+.++++.+++.++++++||....+ .+.+. ..+++|+||..|++.|+|..
T Consensus 127 ~~~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~l----~~~l~-~~~dil~~N~~E~~~l~g~~ 200 (320)
T 3ie7_A 127 IAKKVKKEDMVVIAGSPPPH-YTLSDFKELLRTVKATGAFLGCDNSGEYL----NLAVE-MGVDFIKPNEDEVIAILDEK 200 (320)
T ss_dssp HHHHCCTTCEEEEESCCCTT-CCHHHHHHHHHHHHHHTCEEEEECCHHHH----HHHHH-HCCSEECCBTTGGGGGSCTT
T ss_pred HHHHhcCCCEEEEeCCCCCC-CCHHHHHHHHHHHHhcCCEEEEECChHHH----HHHHh-cCCeEEeeCHHHHHHHhCCC
Confidence 44567889999994223321 12356777888888889999999975321 12222 14799999999999998864
Q ss_pred ccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 246 LNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 246 ~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
. . +..+.+++++++.. .+|+..|+ +.+++++++.+++...... ..++|+||+|+|.+.+.+. +|+++
T Consensus 201 ~----~--~~~~~~~~~~~~~~-~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~---~g~~~ 269 (320)
T 3ie7_A 201 T----N--SLEENIRTLAEKIP-YLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLA---MNMPI 269 (320)
T ss_dssp C----C--CHHHHHHHHTTTCS-EEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred c----C--CCHHHHHHHHhhCC-EEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHH---cCCCH
Confidence 2 1 02333444544433 44444454 6677777777766533332 2599999977777766676 77765
No 46
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.05 E-value=3.7e-09 Score=101.84 Aligned_cols=146 Identities=16% Similarity=0.121 Sum_probs=90.8
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc----hhhhcc-C-CCeeEcCCHHHHHHHh
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSG-Y-PLAVLTPNVNEYKRLV 242 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~----~~ll~~-~-~~~vITPN~~E~~~L~ 242 (376)
.++.+|+++++.-+...+...+.+.++++.+++.++++++||.....+-.. .+.++. . .+++|+||..|+..|+
T Consensus 135 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~ 214 (332)
T 2qcv_A 135 YIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLE 214 (332)
T ss_dssp HHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHT
T ss_pred HHccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHh
Confidence 356789998863222222234567778888888899999999863221100 111111 2 2789999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcC-CeEEEEeeCCCC-CCCCCchHHHHHHHHHHHhhhhcc
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDG-EIAKSVSIYGSP-RRCGGQGDILSGSVAVFLSWARAK 319 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~-~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA~~~~g 319 (376)
|... ..+..+.++++.++....+|+..|+ +.+++++ +..+++...... ..++|+||+|+|.+.+.++ +|
T Consensus 215 g~~~-----~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~---~g 286 (332)
T 2qcv_A 215 NRTE-----KGDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALI---SG 286 (332)
T ss_dssp TCSS-----CCCHHHHHHHHTTSSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHH---TT
T ss_pred CCCc-----CCCHHHHHHHHHHcCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHH---cC
Confidence 8532 1345667777776532234443444 6676665 445555432222 2599999988777777777 78
Q ss_pred CCc
Q 017155 320 GKA 322 (376)
Q Consensus 320 ~~~ 322 (376)
.++
T Consensus 287 ~~~ 289 (332)
T 2qcv_A 287 KGI 289 (332)
T ss_dssp CCH
T ss_pred CCH
Confidence 765
No 47
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.00 E-value=6.1e-09 Score=99.93 Aligned_cols=177 Identities=14% Similarity=0.154 Sum_probs=104.7
Q ss_pred HhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc---hhhhccCCCeeEcCCHHHHHHHhcc
Q 017155 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS---IDLVSGYPLAVLTPNVNEYKRLVQK 244 (376)
Q Consensus 168 ~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~---~~ll~~~~~~vITPN~~E~~~L~g~ 244 (376)
+.++++|++++|. +. ++ ...++++.+ +.+.++++||..+..-... .++++ .++|||||..|++.|+|.
T Consensus 115 ~~~~~~~~v~~~~-~~--~~---~~~~~~~~~-~~~~~v~~Dp~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~ 185 (313)
T 3kd6_A 115 QYYRDSKFVCLGN-ID--PE---LQLKVLDQI-DDPKLVVCDTMNFWIEGKPEELKKVLA--RVDVFIVNDSEARLLSGD 185 (313)
T ss_dssp GGGTTCSEEEECS-SC--HH---HHHHHHTTC-SSCSEEEEECCHHHHHHCHHHHHHHHT--TCSEEEEEHHHHHHHHSC
T ss_pred HHHccCCEEEEcC-CC--HH---HHHHHHHHH-hhCCEEEEcChhhhhhhhHHHHHHHHh--cCCEEEeCHHHHHHHhCC
Confidence 3467899999973 42 22 234555555 4678899999432110000 12332 389999999999999874
Q ss_pred cccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCC--CCCCCCchHHHHHHHHHHHhhhhccCC
Q 017155 245 VLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGS--PRRCGGQGDILSGSVAVFLSWARAKGK 321 (376)
Q Consensus 245 ~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~--~~~t~GsGDvLaG~Iaa~LA~~~~g~~ 321 (376)
.+..+.++.+.+.....+|+..|+ +.+++++++.+++..... ...++|+||+|+|.+.+.++ +|.+
T Consensus 186 --------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~---~g~~ 254 (313)
T 3kd6_A 186 --------PNLVKTARIIREMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLA---RCGN 254 (313)
T ss_dssp --------SCHHHHHHHHHTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHH---HHCC
T ss_pred --------CCHHHHHHHHHHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHH---cCCC
Confidence 245677888876432234444454 677777777776654332 23599999988777777777 6652
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhcCCC----CCcHHHHHHHHHHHHHh
Q 017155 322 ATTSQMNPTVLGCIAGSALLRKAASLAFKDKKR----STLTTDIIECLGRSLED 371 (376)
Q Consensus 322 ~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~----~~~a~dii~~l~~~~~~ 371 (376)
+.. .+...|+..|. .+|.....+.|. .....++.+.+.+..++
T Consensus 255 ~~~---~~l~~a~~~a~----~~aa~~v~~~G~~~~~~~~~~ev~~~l~~~~~~ 301 (313)
T 3kd6_A 255 TSE---AEMRKAVLYGS----AMASFCVEQFGPYRYNDLDLLEVDDRYQSFLEL 301 (313)
T ss_dssp CCH---HHHHHHHHHHH----HHHHHHTTSSTTGGGGTCCHHHHHHHHHHHHHH
T ss_pred ccc---cCHHHHHHHHH----HHHHHHHeecCCCCCCCCCHHHHHHHHHHHHHh
Confidence 100 01123443332 355555455432 24677777777665543
No 48
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=98.99 E-value=2.8e-09 Score=103.62 Aligned_cols=145 Identities=13% Similarity=0.129 Sum_probs=93.6
Q ss_pred HHhhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc----hhhhccCCCeeEcCCHHHHHHH
Q 017155 167 DKWMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSGYPLAVLTPNVNEYKRL 241 (376)
Q Consensus 167 ~~~l~~~davvIGpGl~-~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~----~~ll~~~~~~vITPN~~E~~~L 241 (376)
.+.++.+|+++++.-.. .+. +.+.++++.+++.++++++|+......... .++++ .+++|+||..|++.|
T Consensus 157 ~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l 231 (347)
T 3otx_A 157 VRAMDESRIFYFSGFTLTVDV---NHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLP--YTDIIVANRHEAKEF 231 (347)
T ss_dssp HHHHHHCSEEEEEGGGGGTCH---HHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHH
T ss_pred HHHHhhCCEEEEeeeecccCH---HHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHh--hCCEEecCHHHHHHH
Confidence 34567899999962111 122 467778888888899999999753221111 12332 279999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHH------hhCCeEEEEcCC-ceEEEcCCeEEEEeeCCC---C-CCCCCchHHHHHHHH
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAK------QIGGVTILQKGK-SDLISDGEIAKSVSIYGS---P-RRCGGQGDILSGSVA 310 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~------~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~---~-~~t~GsGDvLaG~Ia 310 (376)
++.... +..+..+.++++.+ .....+|+..|+ +.+++++++.+.+..... . ..++|+||+|.|.+.
T Consensus 232 ~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l 308 (347)
T 3otx_A 232 ANMMKW---DTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFL 308 (347)
T ss_dssp HHHHTC---CCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHH
T ss_pred hcccCC---CcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHH
Confidence 986421 23467778888874 222244554565 677777777666653322 1 359999997766666
Q ss_pred HHHhhhhccCCc
Q 017155 311 VFLSWARAKGKA 322 (376)
Q Consensus 311 a~LA~~~~g~~~ 322 (376)
+.+. +|+++
T Consensus 309 ~~l~---~g~~l 317 (347)
T 3otx_A 309 SAYA---VGKDL 317 (347)
T ss_dssp HHHT---TTCCH
T ss_pred HHHH---cCCCH
Confidence 6666 77765
No 49
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=98.99 E-value=2.7e-09 Score=103.47 Aligned_cols=144 Identities=14% Similarity=0.208 Sum_probs=92.9
Q ss_pred HHHhhccCCEEEEc---CCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc----hhhhccCCCeeEcCCHHHH
Q 017155 166 VDKWMERFDCLVVG---PGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSGYPLAVLTPNVNEY 238 (376)
Q Consensus 166 l~~~l~~~davvIG---pGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~----~~ll~~~~~~vITPN~~E~ 238 (376)
+.+.++.+|+++++ +++ .. +.+.++++.+++.++++++|+.+....... .++++ ..++|+||..|+
T Consensus 155 ~~~~~~~~~~v~~~g~~~~~--~~---~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~ 227 (345)
T 1bx4_A 155 NWMLVEKARVCYIAGFFLTV--SP---ESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMP--YVDILFGNETEA 227 (345)
T ss_dssp HHHHHHHCSEEEEEGGGGGT--CH---HHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGG--GCSEEEEEHHHH
T ss_pred HHHHHhhCCEEEEEEEeccC--CH---HHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhc--cCCEEeCCHHHH
Confidence 34456789999995 232 22 456777888888899999999854221100 12232 278999999999
Q ss_pred HHHhcccccCCCCCCcHHHHHHHHHHh------hCCeEEEEcCC-ceEEEcCCeEEEEeeCCC----CCCCCCchHHHHH
Q 017155 239 KRLVQKVLNCEVNDRDAPELLQSLAKQ------IGGVTILQKGK-SDLISDGEIAKSVSIYGS----PRRCGGQGDILSG 307 (376)
Q Consensus 239 ~~L~g~~~~~~v~~~d~~~~a~~la~~------~~~~vVllKG~-~~vi~~~~~~~~i~~~g~----~~~t~GsGDvLaG 307 (376)
+.|+|... .+..+..+.++++.+. ....+|+..|+ +.+++++++.+++..... ...++|+||+|+|
T Consensus 228 ~~l~g~~~---~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~a 304 (345)
T 1bx4_A 228 ATFAREQG---FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG 304 (345)
T ss_dssp HHHHHHTT---CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHhcccC---CCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHH
Confidence 99998642 1235677788888762 22234444454 667776666666653222 2359999998777
Q ss_pred HHHHHHhhhhccCCc
Q 017155 308 SVAVFLSWARAKGKA 322 (376)
Q Consensus 308 ~Iaa~LA~~~~g~~~ 322 (376)
.+.+.++ +|.++
T Consensus 305 g~~~~l~---~g~~~ 316 (345)
T 1bx4_A 305 GFLSQLV---SDKPL 316 (345)
T ss_dssp HHHHHHT---TTCCH
T ss_pred HHHHHHH---cCCCH
Confidence 7777777 78765
No 50
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=98.96 E-value=2.7e-09 Score=103.24 Aligned_cols=144 Identities=17% Similarity=0.234 Sum_probs=90.4
Q ss_pred HHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccC-CCeeEcCCHHH-HHHHhcc
Q 017155 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGY-PLAVLTPNVNE-YKRLVQK 244 (376)
Q Consensus 167 ~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~-~~~vITPN~~E-~~~L~g~ 244 (376)
.+.++.+|++++...++.. ...+.+.++++.+++.++++++||.+..+ .++++.. .+++|+||..| +..|+|.
T Consensus 141 ~~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~l~~~~~~dil~~N~~E~~~~l~g~ 215 (331)
T 2ajr_A 141 KMTLSKVDCVVISGSIPPG-VNEGICNELVRLARERGVFVFVEQTPRLL----ERIYEGPEFPNVVKPDLRGNHASFLGV 215 (331)
T ss_dssp HHHHTTCSEEEEESCCCTT-SCTTHHHHHHHHHHHTTCEEEEECCHHHH----HHHHHSSCCCSEECCCCTTCCSCBTTB
T ss_pred HHhcccCCEEEEECCCCCC-CCHHHHHHHHHHHHHcCCEEEEECChHHH----HHHHhcCCCCeEEEeCccchHHHHhCC
Confidence 3456789999996334321 01235667777788889999999985321 2233321 27899999999 9999886
Q ss_pred cccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEe-eCCCCC-CCCCchHH-HHHHHHHHHhhhhccC
Q 017155 245 VLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVS-IYGSPR-RCGGQGDI-LSGSVAVFLSWARAKG 320 (376)
Q Consensus 245 ~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~-~~g~~~-~t~GsGDv-LaG~Iaa~LA~~~~g~ 320 (376)
... +.++..+.++++.++ ...+|+..|+ +.+++++++.+++. ...... .++|+||+ .||++++++. +|.
T Consensus 216 ~~~---~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~---~g~ 288 (331)
T 2ajr_A 216 DLK---TFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIK---HGA 288 (331)
T ss_dssp CCC---SHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHH---HCS
T ss_pred CCC---CHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHH---cCC
Confidence 421 123556677777776 3344444454 67777766666554 322222 49999995 5566666652 465
Q ss_pred Cc
Q 017155 321 KA 322 (376)
Q Consensus 321 ~~ 322 (376)
++
T Consensus 289 ~~ 290 (331)
T 2ajr_A 289 NF 290 (331)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 51
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=98.95 E-value=5.5e-09 Score=102.57 Aligned_cols=147 Identities=14% Similarity=0.147 Sum_probs=93.1
Q ss_pred HHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc----hhhhccCCCeeEcCCHHHHHHH
Q 017155 166 VDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSGYPLAVLTPNVNEYKRL 241 (376)
Q Consensus 166 l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~----~~ll~~~~~~vITPN~~E~~~L 241 (376)
..+.++.+|+++++. .... ...+.+.++++.+++.++++++|+.+-...... .+++. .+++|+||..|++.|
T Consensus 170 ~~~~~~~~~~v~i~G-~~~~-~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~--~~dil~~N~~Ea~~l 245 (365)
T 3loo_A 170 NRAYLQGAQFFYVSG-FFFT-VSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFP--YVDVLFGNETEAIAL 245 (365)
T ss_dssp HHHHHHHCSEEEEEG-GGHH-HHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGG--GCSEEEEEHHHHHHH
T ss_pred hHHHHhhCCEEEEee-eecc-CCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHH--hCCEEecCHHHHHHH
Confidence 344567899999962 1111 123567788888888899999999643221111 12332 379999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHh------hCCeEEEEcCC-ceEEE--cCCeEEEEeeCCC---C-CCCCCchHHHHHH
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQ------IGGVTILQKGK-SDLIS--DGEIAKSVSIYGS---P-RRCGGQGDILSGS 308 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~------~~~~vVllKG~-~~vi~--~~~~~~~i~~~g~---~-~~t~GsGDvLaG~ 308 (376)
+|... .+..+..+.++++.+. ....+|+..|+ +.+++ ++++.+.+..... . ..++|+||.|.|.
T Consensus 246 ~g~~~---~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag 322 (365)
T 3loo_A 246 AKEFN---YGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGG 322 (365)
T ss_dssp HHHTT---CCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHH
T ss_pred hcccC---CCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHH
Confidence 98642 1235677788888763 22244555555 67777 6666666654332 2 2499999966655
Q ss_pred HHHHHhhhhccCCc
Q 017155 309 VAVFLSWARAKGKA 322 (376)
Q Consensus 309 Iaa~LA~~~~g~~~ 322 (376)
+.+.+. +|+++
T Consensus 323 fl~~l~---~g~~l 333 (365)
T 3loo_A 323 FLAQLL---QSRTV 333 (365)
T ss_dssp HHHHHH---TTCCH
T ss_pred HHHHHH---CCCCH
Confidence 555555 77765
No 52
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=98.94 E-value=1.6e-08 Score=96.78 Aligned_cols=142 Identities=14% Similarity=0.018 Sum_probs=86.9
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc----hhhhcc-C-CCeeEcCCHHHHHHHh
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS----IDLVSG-Y-PLAVLTPNVNEYKRLV 242 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~----~~ll~~-~-~~~vITPN~~E~~~L~ 242 (376)
.++.+|++.++.-....+...+.+..+++.+++ +.++++||..-..+-.. .+.+.. . ..++|+||..|+..|+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 210 (319)
T 3pl2_A 132 DVREADILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAV 210 (319)
T ss_dssp HHHHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred HhccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHc
Confidence 456789999872111222223455566665554 67899999643211100 111111 2 3799999999999998
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhccC
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAKG 320 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~g~ 320 (376)
|.. +..+.+++|.+.....+|+..|. +.+++++++.+++....... .++|+||+|+|.+.+.+. +|+
T Consensus 211 g~~--------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~---~g~ 279 (319)
T 3pl2_A 211 GET--------EPERAGRALLERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLL---SEW 279 (319)
T ss_dssp SCC--------SHHHHHHHHHHTTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHH---TTC
T ss_pred CCC--------CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHH---cCC
Confidence 742 45667788877533234444454 67777777666665332222 599999977777666666 787
Q ss_pred Cc
Q 017155 321 KA 322 (376)
Q Consensus 321 ~~ 322 (376)
++
T Consensus 280 ~~ 281 (319)
T 3pl2_A 280 PL 281 (319)
T ss_dssp CH
T ss_pred CH
Confidence 65
No 53
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=98.92 E-value=1.7e-09 Score=104.32 Aligned_cols=144 Identities=13% Similarity=0.119 Sum_probs=85.3
Q ss_pred HhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccccc-ccc---hhhhcc-C-CCeeEcCCHHHHHHH
Q 017155 168 KWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLV-TNS---IDLVSG-Y-PLAVLTPNVNEYKRL 241 (376)
Q Consensus 168 ~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll-~~~---~~ll~~-~-~~~vITPN~~E~~~L 241 (376)
++++.+|++.++.-....+...+.+.++++.+++.++++++||.....+ ... .+.+.. . .+++|+||..|++.|
T Consensus 140 ~~~~~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l 219 (327)
T 3hj6_A 140 ELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHL 219 (327)
T ss_dssp HHHC--CEEEEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHH
T ss_pred hHhccCCEEEECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHH
Confidence 3567899999973111123345678888888888999999999854321 110 111111 2 379999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhcc
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARAK 319 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~g 319 (376)
+|.. + ..+.++.+.+.....+|+..|+ +.+++++++.+++....... .++|+||+|+|.+.+.+. +|
T Consensus 220 ~g~~-----~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~---~g 288 (327)
T 3hj6_A 220 FGPD-----S---PENYVKRYLELGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLL---DG 288 (327)
T ss_dssp HTTS-----C---SSGGGGGGTTTTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTS---SC
T ss_pred hCCC-----C---HHHHHHHHHhCCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHH---cC
Confidence 9852 1 1223445554332234444454 67777777666554322222 599999988777776666 77
Q ss_pred CCc
Q 017155 320 GKA 322 (376)
Q Consensus 320 ~~~ 322 (376)
+++
T Consensus 289 ~~~ 291 (327)
T 3hj6_A 289 YTV 291 (327)
T ss_dssp STT
T ss_pred CCH
Confidence 765
No 54
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=98.92 E-value=2.6e-09 Score=103.87 Aligned_cols=138 Identities=15% Similarity=0.081 Sum_probs=85.8
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-cccc--c-hhhhcc-CC-CeeEcCCHHHHHHHh
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTN--S-IDLVSG-YP-LAVLTPNVNEYKRLV 242 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~--~-~~ll~~-~~-~~vITPN~~E~~~L~ 242 (376)
.++.+|+++++.....++...+.+.++++.+++.++++++||.... +... . .+.+.. ++ +++|+||..|+..|+
T Consensus 138 ~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~ 217 (339)
T 1tyy_A 138 PFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLS 217 (339)
T ss_dssp CCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHH
T ss_pred HhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHh
Confidence 3567899999643223444557788888888888999999997532 1111 0 111111 22 789999999999999
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHHHHHHHHHh
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILSGSVAVFLS 314 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA 314 (376)
|.. +..+.++++.+.....+|+..|+ +.+++++++.+++...... ..++|+||+|+|.+.+.++
T Consensus 218 g~~--------~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~ 283 (339)
T 1tyy_A 218 GAS--------HWQDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLS 283 (339)
T ss_dssp CCS--------SGGGGSSTTGGGTCSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHT
T ss_pred CCC--------CHHHHHHHHHHcCCCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHH
Confidence 753 12233445544322233443444 6677776666666532222 2599999977776666666
No 55
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=98.89 E-value=1.8e-08 Score=95.94 Aligned_cols=133 Identities=13% Similarity=0.064 Sum_probs=87.1
Q ss_pred hhhhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhccCCCeeEcCCHH
Q 017155 157 CISSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVN 236 (376)
Q Consensus 157 ~~~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~ 236 (376)
.+++++++.+.+.++.+|+++++.-+ . .+.+.++++.+++.++++++||...... ..+++. .+++|+||..
T Consensus 116 ~l~~~~~~~~~~~~~~~~~v~~~g~~--~---~~~~~~~~~~a~~~g~~v~~D~~~~~~~--~~~ll~--~~dil~~N~~ 186 (299)
T 3ikh_A 116 TFSLDEMIPHMADAVAGDILLQQGNF--S---LDKTRALFQYARSRGMTTVFNPSPVNPD--FCHLWP--LIDIAVVNES 186 (299)
T ss_dssp HCCHHHHGGGGTTCCTTCEEEECSCS--C---HHHHHHHHHHHHHTTCEEEECCCSCCGG--GGGCGG--GCSEEEEEHH
T ss_pred cCCHHHHHHHHhhhccCCEEEECCCC--C---HHHHHHHHHHHHHcCCEEEEccccchhh--HHHHHh--hCCEEEecHH
Confidence 45555555544556789999997422 2 2456777788888899999999765311 112222 2799999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHH-HHHHHH
Q 017155 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSG-SVAVFL 313 (376)
Q Consensus 237 E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG-~Iaa~L 313 (376)
|++.|+|. + .. .+|+..|+ +.+++++++.+++....... .++|+||+|+| .+.+.+
T Consensus 187 E~~~l~g~--g------------------~~-~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l 245 (299)
T 3ikh_A 187 EAELLQPY--G------------------VK-TLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASAL 245 (299)
T ss_dssp HHHHHCCC--S------------------CS-EEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHhcC--C------------------CC-EEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHH
Confidence 99999751 1 12 34444454 66777776666665332222 59999998777 666666
Q ss_pred hhhhccCCc
Q 017155 314 SWARAKGKA 322 (376)
Q Consensus 314 A~~~~g~~~ 322 (376)
. +|+++
T Consensus 246 ~---~g~~~ 251 (299)
T 3ikh_A 246 L---RGVAP 251 (299)
T ss_dssp H---TTSSS
T ss_pred H---cCCCH
Confidence 6 78776
No 56
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=98.88 E-value=6.9e-08 Score=93.47 Aligned_cols=177 Identities=16% Similarity=0.093 Sum_probs=102.1
Q ss_pred hhhhHHHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhcc-CC-CeeEcCCHH
Q 017155 159 SSKILAEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG-YP-LAVLTPNVN 236 (376)
Q Consensus 159 ~~~~~~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~-~~-~~vITPN~~ 236 (376)
+.+++......++.+|+++++... . +.+.++++.+++.++++++||.....+-. .+.+.. .+ .++|+||..
T Consensus 135 ~~~~~~~~~~~l~~~~~v~~~~~~---~---~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~l~~~l~~~dil~~N~~ 207 (334)
T 2pkf_A 135 RNIKLADVVSAIGKPELVIIGAND---P---EAMFLHTEECRKLGLAFAADPSQQLARLS-GEEIRRLVNGAAYLFTNDY 207 (334)
T ss_dssp GGCCHHHHHHHHCSCSEEEEESCC---H---HHHHHHHHHHHHHTCCEEEECGGGGGTSC-HHHHHTTTTTCSEEEEEHH
T ss_pred CHhhcChhhhhhcCCCEEEEcCCC---h---HHHHHHHHHHHhcCCeEEEeccchhhhhh-HHHHHHHHhcCCEEecCHH
Confidence 334444433335789999997422 2 34566677777788999999976421111 111222 33 799999999
Q ss_pred HHHHHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCe-EEEEeeCCCC--CCCCCchHHHHHHHHHH
Q 017155 237 EYKRLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEI-AKSVSIYGSP--RRCGGQGDILSGSVAVF 312 (376)
Q Consensus 237 E~~~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~-~~~i~~~g~~--~~t~GsGDvLaG~Iaa~ 312 (376)
|+..|+|... . +. +++.+... .+|+..|. +.+++++++ .+++...... ..++|+||+|+|.+.+.
T Consensus 208 E~~~l~g~~~----~--~~----~~l~~~~~-~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~ 276 (334)
T 2pkf_A 208 EWDLLLSKTG----W--SE----ADVMAQID-LRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTG 276 (334)
T ss_dssp HHHHHHHHHC----C--CH----HHHHTTCS-CEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHhccCC----C--CH----HHHHhcCC-EEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHH
Confidence 9999998541 1 11 12333333 34444454 667776655 6666533322 25999999777766666
Q ss_pred HhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCC--C-CCcHHHHHHHHHHH
Q 017155 313 LSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKK--R-STLTTDIIECLGRS 368 (376)
Q Consensus 313 LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~--~-~~~a~dii~~l~~~ 368 (376)
+. +|+++ ..|+..|. .++..+..+.| . .....++.+.+.+.
T Consensus 277 l~---~g~~~--------~~a~~~A~----~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 320 (334)
T 2pkf_A 277 RS---AGLGL--------ERSAQLGS----LVAVLVLESTGTQEWQWDYEAAASRLAGA 320 (334)
T ss_dssp HH---TTCCH--------HHHHHHHH----HHHHHHHTSSSSSCCCCCHHHHHHHHHHH
T ss_pred HH---cCCCH--------HHHHHHHH----HHHHHHHhCCCCCcCCCCHHHHHHHHHHH
Confidence 66 77765 34444443 34444444443 2 23455666555543
No 57
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=98.83 E-value=4.8e-08 Score=94.07 Aligned_cols=140 Identities=17% Similarity=0.138 Sum_probs=84.4
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcc-cccccch---hhhccCCCeeEcCCHHHHHHHhcc
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGL-FLVTNSI---DLVSGYPLAVLTPNVNEYKRLVQK 244 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl-~ll~~~~---~ll~~~~~~vITPN~~E~~~L~g~ 244 (376)
.+..++++.++.-+.......+.+.++++.+++.+ .+++|+..- .+..... ++++ ..++|+||..|+..|+|.
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~ 208 (325)
T 3h49_A 132 RFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNETLDDICEALS--YVDYLFPNFAEAKLLTGK 208 (325)
T ss_dssp GGGGCSEEEEEEETTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHT--TCSEEECBHHHHHHHHTC
T ss_pred hhccCCEEEEecccCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHh--hCCEEecCHHHHHHHhCC
Confidence 45678999887311111001235677777777777 577775322 2211111 2232 379999999999999974
Q ss_pred cccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCC--CCCCCCCchHHHHHHHHHHHhhhhccCC
Q 017155 245 VLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYG--SPRRCGGQGDILSGSVAVFLSWARAKGK 321 (376)
Q Consensus 245 ~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g--~~~~t~GsGDvLaG~Iaa~LA~~~~g~~ 321 (376)
. +..+.++.+.+.....+|+..|+ +.+++++++.+.+.... ....++|+||+|+|.+.+.+. +|.+
T Consensus 209 ~--------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~---~g~~ 277 (325)
T 3h49_A 209 E--------TLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALL---EGKN 277 (325)
T ss_dssp S--------SHHHHHHHHHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHH---TTCC
T ss_pred C--------CHHHHHHHHHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHH---cCCC
Confidence 2 34556677765432244444454 67777777766665322 223599999977766666666 7776
Q ss_pred c
Q 017155 322 A 322 (376)
Q Consensus 322 ~ 322 (376)
+
T Consensus 278 ~ 278 (325)
T 3h49_A 278 L 278 (325)
T ss_dssp H
T ss_pred H
Confidence 5
No 58
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=98.82 E-value=2.1e-08 Score=98.88 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=90.0
Q ss_pred HHhhccCCEEEEc---CCCCCCHHHHHHHHHHHHHhhc-CCCCEEEeCCcccccccc----hhhhccCCCeeEcCCHHHH
Q 017155 167 DKWMERFDCLVVG---PGLGRDPYLLECVSEIMKHARQ-SNVPIVIDGDGLFLVTNS----IDLVSGYPLAVLTPNVNEY 238 (376)
Q Consensus 167 ~~~l~~~davvIG---pGl~~~~~~~~~~~~il~~a~~-~~~pvVLDpdgl~ll~~~----~~ll~~~~~~vITPN~~E~ 238 (376)
.+.++.+|+++++ +++ .. +.+..+++.+++ .++++++|+.+....... .++++ ..+||+||..|+
T Consensus 175 ~~~l~~~~~v~~~g~~~~~--~~---~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~--~~dil~pN~~Ea 247 (383)
T 2abs_A 175 TTFASGALIFYATAYTLTA--TP---KNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLL--HTNILFGNEEEF 247 (383)
T ss_dssp HHHTTTCCEEEEEGGGGTT--CH---HHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHH--TCSEEEEEHHHH
T ss_pred HHHhhcCCEEEEeeecccC--CH---HHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHh--hCCEEeCCHHHH
Confidence 3456789999996 222 22 457778888888 889999999854221110 12332 278999999999
Q ss_pred HHHhccc-ccCCCC--------CCcHHHHHHHHHHh-----h-CC-eEEEEcCC-ceEEE-----cCCeEEEEeeCCC--
Q 017155 239 KRLVQKV-LNCEVN--------DRDAPELLQSLAKQ-----I-GG-VTILQKGK-SDLIS-----DGEIAKSVSIYGS-- 294 (376)
Q Consensus 239 ~~L~g~~-~~~~v~--------~~d~~~~a~~la~~-----~-~~-~vVllKG~-~~vi~-----~~~~~~~i~~~g~-- 294 (376)
+.|+|.. .....+ .++..+.++++.+. . +. .+|+..|. +.+++ +++..+++.....
T Consensus 248 ~~L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~ 327 (383)
T 2abs_A 248 AHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAA 327 (383)
T ss_dssp HHHHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCG
T ss_pred HHHhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCc
Confidence 9998753 110000 23456677777763 1 33 33443454 66776 5555555543222
Q ss_pred --CCCCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 295 --PRRCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 295 --~~~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
...++|+||+|+|.+.+.++ +|.++
T Consensus 328 ~~vvDttGAGDaF~ag~~~~l~---~g~~l 354 (383)
T 2abs_A 328 EKIVDTNGAGDAFVGGFLYALS---QGKTV 354 (383)
T ss_dssp GGCCCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred CCcCcCCChHHHHHHHHHHHHH---cCCCH
Confidence 23599999977777777777 77765
No 59
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=98.80 E-value=4.3e-08 Score=93.34 Aligned_cols=129 Identities=14% Similarity=0.118 Sum_probs=82.1
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc---hhhhccCCCeeEcCCHHHHHHHhccccc
Q 017155 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS---IDLVSGYPLAVLTPNVNEYKRLVQKVLN 247 (376)
Q Consensus 171 ~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~---~~ll~~~~~~vITPN~~E~~~L~g~~~~ 247 (376)
+.+|++.++... . +.+.++++.+++.+ ++++||......... .++++ ..++|+||..|+..|+|...
T Consensus 129 ~~~~~v~~~~~~---~---~~~~~~~~~a~~~g-~v~~D~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~~- 198 (302)
T 2c4e_A 129 FNTEIVHIATGD---P---EFNLKCAKKAYGNN-LVSFDPGQDLPQYSKEMLLEIIE--HTNFLFMNKHEFERASNLLN- 198 (302)
T ss_dssp CCEEEEEECSSC---H---HHHHHHHHHHBTTB-EEEECCGGGGGGCCHHHHHHHHH--TCSEEEEEHHHHHHHHHHHT-
T ss_pred ccCCEEEEeCCC---c---HHHHHHHHHHHhcC-CEEEeCchhhhhhhHHHHHHHHh--cCCEEEcCHHHHHHHhCCCC-
Confidence 468899997532 2 45677788888888 999999852111001 12332 37899999999999998541
Q ss_pred CCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC--CCCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 248 CEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP--RRCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 248 ~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~--~~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
. +.. ++.++ ...+|+..|+ +.+++++++.+++.....+ ..++|+||+|+|.+.+.++ +|.++
T Consensus 199 ---~--~~~----~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~---~g~~~ 263 (302)
T 2c4e_A 199 ---F--EID----DYLER-VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYV---KGYDL 263 (302)
T ss_dssp ---C--CHH----HHHTT-CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred ---c--cHH----HHHhc-CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHH---cCCCH
Confidence 1 111 44444 3244444454 6677766666666543333 3599999988777777777 78765
No 60
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=98.80 E-value=4.9e-08 Score=93.10 Aligned_cols=136 Identities=15% Similarity=0.087 Sum_probs=83.7
Q ss_pred hhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-ccccc--hhhhcc-CC-CeeEcCCHHHHHHHh
Q 017155 169 WMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS--IDLVSG-YP-LAVLTPNVNEYKRLV 242 (376)
Q Consensus 169 ~l~~~davvIGpGl~-~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~~--~~ll~~-~~-~~vITPN~~E~~~L~ 242 (376)
.++.+|++.++.-.. .++...+.+.++++.+++.++++++||.... +.... .+.+.. .+ +++|+||..|+..|+
T Consensus 122 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~ 201 (309)
T 1v1a_A 122 YLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLF 201 (309)
T ss_dssp GGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHH
T ss_pred HhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHh
Confidence 457899999863222 1345567788888888888999999998632 21100 111111 23 789999999999998
Q ss_pred cccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcC-CeEEEEeeCCCC-CCCCCchHHHHHHHHHHHhhhhc
Q 017155 243 QKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDG-EIAKSVSIYGSP-RRCGGQGDILSGSVAVFLSWARA 318 (376)
Q Consensus 243 g~~~~~~v~~~d~~~~a~~la~~~~~~vVllK-G~-~~vi~~~-~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA~~~~ 318 (376)
|.+ .+.++ +.+...|++| |+ +.++ ++ ++.+++.....+ ..++|+||+|+|.+.+.+. +
T Consensus 202 g~~----------~~~~~----~~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~---~ 263 (309)
T 1v1a_A 202 GRV----------EEALR----ALSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAV---W 263 (309)
T ss_dssp SSH----------HHHHH----HTCCSEEEEECGGGCEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHH---T
T ss_pred CCH----------HHHHH----hcCCCEEEEEecCCCeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHH---c
Confidence 631 12222 3333334444 44 5555 44 555555432222 2599999977776666666 7
Q ss_pred cCCc
Q 017155 319 KGKA 322 (376)
Q Consensus 319 g~~~ 322 (376)
|+++
T Consensus 264 g~~~ 267 (309)
T 1v1a_A 264 GLPV 267 (309)
T ss_dssp TCCH
T ss_pred CCCH
Confidence 7765
No 61
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=98.75 E-value=8.9e-08 Score=91.45 Aligned_cols=138 Identities=15% Similarity=0.159 Sum_probs=84.2
Q ss_pred hhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-ccccc---hhhhcc-CC-Ce--eEcCCHHHHH
Q 017155 169 WMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS---IDLVSG-YP-LA--VLTPNVNEYK 239 (376)
Q Consensus 169 ~l~~~davvIGpGl~-~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~~---~~ll~~-~~-~~--vITPN~~E~~ 239 (376)
.++.+|++.++.-.. .++...+.+.++++.+++. ++||.... +.... .+.+.. .+ ++ +|+||..|++
T Consensus 125 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~ 200 (313)
T 2v78_A 125 YVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTK 200 (313)
T ss_dssp HHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHH
T ss_pred HhcCCCEEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHH
Confidence 356899999862111 1233456677777766443 89997532 21100 011111 22 78 9999999999
Q ss_pred HHhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEc-CC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHHHHHHHHHhhh
Q 017155 240 RLVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQK-GK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILSGSVAVFLSWA 316 (376)
Q Consensus 240 ~L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllK-G~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA~~ 316 (376)
.|+|. .+..+.++++.+. +...|++| |. +.+++++++.+++.....+ ..++|+||+|+|.+.+.+.
T Consensus 201 ~l~g~--------~~~~~~~~~l~~~-g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~-- 269 (313)
T 2v78_A 201 ILLDV--------TDPDEAYRKYKEL-GVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYL-- 269 (313)
T ss_dssp HHHSC--------CCHHHHHHHHHHT-TEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHH--
T ss_pred HHhCC--------CCHHHHHHHHHhC-CCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHH--
Confidence 99874 2455677777764 33344444 44 6677776766666532222 2599999977776666666
Q ss_pred hccCCc
Q 017155 317 RAKGKA 322 (376)
Q Consensus 317 ~~g~~~ 322 (376)
+|.++
T Consensus 270 -~g~~~ 274 (313)
T 2v78_A 270 -QGKDI 274 (313)
T ss_dssp -TTCCH
T ss_pred -cCCCH
Confidence 77765
No 62
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=98.73 E-value=7.5e-08 Score=91.80 Aligned_cols=138 Identities=15% Similarity=0.180 Sum_probs=85.2
Q ss_pred hhccCCEEEEcCCCC-CCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-cccc------chhhhccCCCeeEcCCHHHHHH
Q 017155 169 WMERFDCLVVGPGLG-RDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTN------SIDLVSGYPLAVLTPNVNEYKR 240 (376)
Q Consensus 169 ~l~~~davvIGpGl~-~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~------~~~ll~~~~~~vITPN~~E~~~ 240 (376)
.++.+|++.++.-.. .++...+.+.++++.+++. ++||.... +... ..++++...+++|+||..|+..
T Consensus 125 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~ 200 (311)
T 2dcn_A 125 YVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKI 200 (311)
T ss_dssp HHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHH
T ss_pred HHcCCCEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHH
Confidence 457899999862111 1334456777777776543 89998632 2110 0123330137999999999999
Q ss_pred HhcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhhc
Q 017155 241 LVQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWARA 318 (376)
Q Consensus 241 L~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~~ 318 (376)
|+|.. +..+.++++.+. ...+|+..|. +.+++++++.+++.....+. .++|+||+|+|.+.+.+. +
T Consensus 201 l~g~~--------~~~~~~~~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~---~ 268 (311)
T 2dcn_A 201 ILGES--------DPDKAAKAFSDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYY---K 268 (311)
T ss_dssp HHSCC--------CHHHHHHHHTTT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHT---T
T ss_pred HhCCC--------CHHHHHHHHHHh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHH---c
Confidence 98742 345667777664 2233333344 67777777766665332222 599999977777666666 7
Q ss_pred cCCc
Q 017155 319 KGKA 322 (376)
Q Consensus 319 g~~~ 322 (376)
|.++
T Consensus 269 g~~~ 272 (311)
T 2dcn_A 269 GFEM 272 (311)
T ss_dssp TCCH
T ss_pred CCCH
Confidence 7765
No 63
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=98.71 E-value=6.5e-08 Score=92.07 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=81.7
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-c-----c-----ccchhhhccCCCeeEcCCHHHHH
Q 017155 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-L-----V-----TNSIDLVSGYPLAVLTPNVNEYK 239 (376)
Q Consensus 171 ~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-l-----l-----~~~~~ll~~~~~~vITPN~~E~~ 239 (376)
..++++.+|. +...+ ...++++.+++.++++++||.+.. . . ....++++ .+++|+||..|+.
T Consensus 118 ~~~~~v~~~~-~~~~~----~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~ 190 (298)
T 1vk4_A 118 IEGEAVHINP-LWYGE----FPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK--YLDLFKVDSREAE 190 (298)
T ss_dssp CCSSEEEECC-SSTTS----SCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG--GCSEEEEEHHHHH
T ss_pred CCCCEEEECC-ccccc----ccHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcc--cCCEEecCHHHHH
Confidence 4789999974 32211 122344555556889999998521 0 0 00012332 2789999999999
Q ss_pred HHhcccccCCCCCCcHHHHHHHHHHhh-CCeEEEEcCCceEEEcCCeEEEEeeCCCCC-CCCCchHHHHHHHHHHHhhhh
Q 017155 240 RLVQKVLNCEVNDRDAPELLQSLAKQI-GGVTILQKGKSDLISDGEIAKSVSIYGSPR-RCGGQGDILSGSVAVFLSWAR 317 (376)
Q Consensus 240 ~L~g~~~~~~v~~~d~~~~a~~la~~~-~~~vVllKG~~~vi~~~~~~~~i~~~g~~~-~t~GsGDvLaG~Iaa~LA~~~ 317 (376)
.|+|.. +..+.++.+.+.. ..++|-+ ..+.+++++ +.+++.....+. .++|+||+|+|.+.+.+.
T Consensus 191 ~l~g~~--------~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~--- 257 (298)
T 1vk4_A 191 TLTGTN--------DLRESCRIIRSFGAKIILATH-ASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFV--- 257 (298)
T ss_dssp HHHSCS--------CHHHHHHHHHHTTCSSEEEEE-TTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHH---
T ss_pred HHhCCC--------CHHHHHHHHHhcCCCEEEEEc-CCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHH---
Confidence 998742 4566777777642 3333434 556777766 555565322222 499999988777777777
Q ss_pred c-cCCc
Q 017155 318 A-KGKA 322 (376)
Q Consensus 318 ~-g~~~ 322 (376)
+ |.++
T Consensus 258 ~~g~~~ 263 (298)
T 1vk4_A 258 FKKMSI 263 (298)
T ss_dssp TSCCCH
T ss_pred HcCCCH
Confidence 7 8765
No 64
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=98.64 E-value=3.8e-07 Score=88.04 Aligned_cols=164 Identities=13% Similarity=0.141 Sum_probs=96.1
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccc-cccc--hhhhccCCCeeEcCCHHHHHHHhccccc
Q 017155 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFL-VTNS--IDLVSGYPLAVLTPNVNEYKRLVQKVLN 247 (376)
Q Consensus 171 ~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~l-l~~~--~~ll~~~~~~vITPN~~E~~~L~g~~~~ 247 (376)
+.+|++.++.. .. +.+.++++.+++.++++++||..... .... .++++. .++|+||..|+..|+|...
T Consensus 134 ~~~~~v~~~~~---~~---~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~l~~--~dil~~N~~Ea~~l~g~~~- 204 (326)
T 3b1n_A 134 KDIKLAIVGPD---GF---QGMVQHTEELAQAGVPFIFDPGQGLPLFDGATLRRSIEL--ATYIAVNDYEAKLVCDKTG- 204 (326)
T ss_dssp CSCSEEEECSC---CH---HHHHHHHHHHHHHTCCEEECCGGGGGGCCHHHHHHHHHH--CSEEEEEHHHHHHHHHHHC-
T ss_pred cCCCEEEECCc---cH---HHHHHHHHHHHHCCCEEEEeCchhhhhccHHHHHHHHHh--CCEEecCHHHHHHHhCCCC-
Confidence 67899999742 22 34566777777789999999975321 1110 123322 7899999999999987531
Q ss_pred CCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC-C-CCCCchHHHHHHHHHHHhhhhccCCccc
Q 017155 248 CEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP-R-RCGGQGDILSGSVAVFLSWARAKGKATT 324 (376)
Q Consensus 248 ~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~-~-~t~GsGDvLaG~Iaa~LA~~~~g~~~~~ 324 (376)
.+. +++.+... .+|+..|+ +.+++++++.+++...... . .++|+||+|+|.+.+.+. +|.++
T Consensus 205 -----~~~----~~l~~~~~-~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~---~g~~~-- 269 (326)
T 3b1n_A 205 -----WSE----DEIASRVQ-ALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIE---HGFDW-- 269 (326)
T ss_dssp -----CCH----HHHHTTSS-EEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHH---TTCCH--
T ss_pred -----CCH----HHHHhcCC-EEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHH---cCCCH--
Confidence 111 12333333 34444454 6777777766666533332 3 599999977766666666 77765
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHhhcCC--C-CCcHHHHHHHHHHH
Q 017155 325 SQMNPTVLGCIAGSALLRKAASLAFKDKK--R-STLTTDIIECLGRS 368 (376)
Q Consensus 325 ~~~~~~~~aa~~a~~l~~~ag~~a~~~~~--~-~~~a~dii~~l~~~ 368 (376)
..|+..|. .+|..+..+.| . .....++.+.+.+.
T Consensus 270 ------~~a~~~A~----~~aa~~v~~~G~~~~~~~~~ev~~~l~~~ 306 (326)
T 3b1n_A 270 ------ATAGRLAS----LMGALKIAHQGPQTYAPTRAEIDARFETA 306 (326)
T ss_dssp ------HHHHHHHH----HHHHHHHTSSSTTCCCCCHHHHHHHHHHH
T ss_pred ------HHHHHHHH----HHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence 34444443 34444444443 2 23455665555443
No 65
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=98.63 E-value=1.7e-07 Score=90.01 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=78.6
Q ss_pred HHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc-hhhhccCCCeeEcCCHHHHHHHhccc
Q 017155 167 DKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS-IDLVSGYPLAVLTPNVNEYKRLVQKV 245 (376)
Q Consensus 167 ~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~-~~ll~~~~~~vITPN~~E~~~L~g~~ 245 (376)
.+.++.+|+++++..+ . .+.+.++++.+++.++++++||.....+... .+++. .+++|+||..|++.|+|.
T Consensus 138 ~~~l~~~~~v~~~~~~--~---~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~ll~--~~dil~~N~~Ea~~l~g~- 209 (310)
T 3go6_A 138 PSAVANCDVLLTQLEI--P---VATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAA--IADVVIANEHEANDWPSP- 209 (310)
T ss_dssp TTTTTTCSEEEECSSS--C---HHHHHHHHHHHHHTTCEEEEECCSSSCCHHHHHHHHH--HCSEEEEEHHHHHHSSSC-
T ss_pred HHHhhcCCEEEECCCC--C---HHHHHHHHHHHHHcCCEEEEcCCccccchHHHHHHHh--hCCEEEeCHHHHHHHhCC-
Confidence 4456789999997432 2 2356677777888899999999854322110 12332 278999999999999752
Q ss_pred ccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHHHHHHHHHh
Q 017155 246 LNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILSGSVAVFLS 314 (376)
Q Consensus 246 ~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLaG~Iaa~LA 314 (376)
.. .+|+..|+ +.+++++++.+++...... ..++|+||.|+|.+.+.+.
T Consensus 210 --------------------~~-~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~ 259 (310)
T 3go6_A 210 --------------------PT-HFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWP 259 (310)
T ss_dssp --------------------CS-EEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCC
T ss_pred --------------------CC-EEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHH
Confidence 22 34444454 6677777777766533222 2599999977766666666
No 66
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=98.62 E-value=2.5e-07 Score=89.81 Aligned_cols=179 Identities=13% Similarity=0.096 Sum_probs=96.7
Q ss_pred HhhccCCEEEEcC-CCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-ccccc--hhhhcc-CC-CeeEcCCHHHHHHH
Q 017155 168 KWMERFDCLVVGP-GLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS--IDLVSG-YP-LAVLTPNVNEYKRL 241 (376)
Q Consensus 168 ~~l~~~davvIGp-Gl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~~--~~ll~~-~~-~~vITPN~~E~~~L 241 (376)
++++.++++.++. -+..++...+.+.++++.+++.++++++||..-. +.... .+.+.. ++ .++++||..|+..|
T Consensus 146 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l 225 (351)
T 4gm6_A 146 ELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAF 225 (351)
T ss_dssp HHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHT
T ss_pred HHHhhcccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHH
Confidence 4467788888862 1112445567788899999999999999996322 11111 111111 23 78999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCC-----eEEEEcCC---ceEEEcCCeEEEEeeCC-CCC-CCCCchHH-HHHHHH
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQIGG-----VTILQKGK---SDLISDGEIAKSVSIYG-SPR-RCGGQGDI-LSGSVA 310 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~~~~-----~vVllKG~---~~vi~~~~~~~~i~~~g-~~~-~t~GsGDv-LaG~Ia 310 (376)
+|... +..+..+...+....... ..++.-+. ...++..++.++..+.. .+. .|+|+||. .||+++
T Consensus 226 ~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~ 301 (351)
T 4gm6_A 226 FEISS----ETTDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLH 301 (351)
T ss_dssp SCCCT----TCSCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHH
T ss_pred hCCCC----chhHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHH
Confidence 98642 223444333332221110 01122221 22344444444443221 233 59999995 455666
Q ss_pred HHHhhhhccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCC--CCCcHHHHHHHHH
Q 017155 311 VFLSWARAKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKK--RSTLTTDIIECLG 366 (376)
Q Consensus 311 a~LA~~~~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~--~~~~a~dii~~l~ 366 (376)
+++ +|.++ ..++..|. .||-++..+.| .++...++.+.+.
T Consensus 302 ~l~----~g~~~--------~~al~~A~----aaaal~v~~~Ga~~~~~~~ev~~~l~ 343 (351)
T 4gm6_A 302 GIL----SEWRP--------DETVKFAT----AAAGLKHSIHGDINPFDEKTIADFAA 343 (351)
T ss_dssp HHH----TTCCH--------HHHHHHHH----HHHHHHTTSSSSSCCCCHHHHHHHHH
T ss_pred HHH----CCCCH--------HHHHHHHH----HHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence 654 57665 34444443 35555555544 4444555555443
No 67
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=98.55 E-value=4.4e-07 Score=89.23 Aligned_cols=146 Identities=15% Similarity=0.129 Sum_probs=88.9
Q ss_pred HHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccch----hhhccCCCeeEcCCHHHHHHH
Q 017155 166 VDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSI----DLVSGYPLAVLTPNVNEYKRL 241 (376)
Q Consensus 166 l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~----~ll~~~~~~vITPN~~E~~~L 241 (376)
..+.++.++++.+.. ... +...+.+.++++.+++.++++++|+.......... ++++ ..++|+||..|+..|
T Consensus 174 ~~~~i~~a~~~~~~g-~~~-~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~--~~Dil~~Ne~Ea~~l 249 (372)
T 3uq6_A 174 VWSLVEKAQVYYIAG-FVI-NTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS--YSNIVFGNESEAEAY 249 (372)
T ss_dssp HHHHHHHCSEEEEEG-GGH-HHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT--TCSEEEEEHHHHHHH
T ss_pred HHHHhhcccEEEEec-ccc-cccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhh--cCCcccCCHHHHHHH
Confidence 345567889998863 322 23356677788888899999999997654332222 2332 279999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHh-------hCCeEEEEcCC-ceEEEcCCe--EEEEeeCCCC----CCCCCchHHHH-
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQ-------IGGVTILQKGK-SDLISDGEI--AKSVSIYGSP----RRCGGQGDILS- 306 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~-------~~~~vVllKG~-~~vi~~~~~--~~~i~~~g~~----~~t~GsGDvLa- 306 (376)
++... ..+++..+.++.+.+. ....+|+..|+ +.++++++. ...+.....+ .-|+|+||+|+
T Consensus 250 ~~~~~---~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~a 326 (372)
T 3uq6_A 250 GEVHG---LLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAA 326 (372)
T ss_dssp HHHTT---CCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHH
T ss_pred hCCCC---CchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHH
Confidence 98642 1234556666776652 11245555666 556655432 1222211211 24999999665
Q ss_pred HHHHHHHhhhhccCCc
Q 017155 307 GSVAVFLSWARAKGKA 322 (376)
Q Consensus 307 G~Iaa~LA~~~~g~~~ 322 (376)
|+++++ . +|+++
T Consensus 327 gfl~~l-~---~g~~l 338 (372)
T 3uq6_A 327 GFIADY-I---RGKPM 338 (372)
T ss_dssp HHHHHH-T---TTCCH
T ss_pred HHHHHH-H---cCCCH
Confidence 555554 4 67765
No 68
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=98.48 E-value=1.7e-06 Score=82.80 Aligned_cols=131 Identities=13% Similarity=0.108 Sum_probs=77.8
Q ss_pred hccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcC--------CCCEEEeCCcccccccchhhhccCCCeeEcCCHHHHHHH
Q 017155 170 MERFDCLVVGPGLGRDPYLLECVSEIMKHARQS--------NVPIVIDGDGLFLVTNSIDLVSGYPLAVLTPNVNEYKRL 241 (376)
Q Consensus 170 l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~--------~~pvVLDpdgl~ll~~~~~ll~~~~~~vITPN~~E~~~L 241 (376)
++.+|++.++. . .. +.+.++++.+++. ++++++|+.... ....++++ ..++|+||..|+..|
T Consensus 144 l~~~~~v~~~~-~--~~---~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~--~~~~~~l~--~~dil~~n~~ea~~l 213 (312)
T 2hlz_A 144 LTQFKWIHIEG-R--NA---SEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKPR--EELFQLFG--YGDVVFVSKDVAKHL 213 (312)
T ss_dssp GGGEEEEEEEC-S--SH---HHHHHHHHHHHHHHTTSCGGGCCEEEEEECSCC--GGGGGGGG--SSSEEEECHHHHHHT
T ss_pred hccCCEEEEec-c--CH---HHHHHHHHHHHHhcccccCCCCeEEEEEcccch--HHHHHHHh--cCCEEEEcHHHHHHc
Confidence 56789999974 2 22 2344445544443 678999986431 11112332 268999999999987
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhC--CeEEEEcCC-ceEEEcC-CeEEEEeeCC-C-CCCCCCchHHHHHHHHHHHhh
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQIG--GVTILQKGK-SDLISDG-EIAKSVSIYG-S-PRRCGGQGDILSGSVAVFLSW 315 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~~~--~~vVllKG~-~~vi~~~-~~~~~i~~~g-~-~~~t~GsGDvLaG~Iaa~LA~ 315 (376)
|. .+..+.++.+.+..+ ..+|+..|. +.++++. +..+++.... . ...++|+||+|+|.+.+.+.
T Consensus 214 -g~--------~~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~- 283 (312)
T 2hlz_A 214 -GF--------QSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLS- 283 (312)
T ss_dssp -TC--------CSHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHH-
T ss_pred -CC--------CCHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHH-
Confidence 52 134455666665443 244554454 6676653 4455554311 1 23599999977776666666
Q ss_pred hhccCCc
Q 017155 316 ARAKGKA 322 (376)
Q Consensus 316 ~~~g~~~ 322 (376)
+|.++
T Consensus 284 --~g~~~ 288 (312)
T 2hlz_A 284 --QGRSV 288 (312)
T ss_dssp --TTCCH
T ss_pred --cCCCH
Confidence 77764
No 69
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=98.40 E-value=3.2e-06 Score=80.64 Aligned_cols=166 Identities=14% Similarity=0.100 Sum_probs=93.1
Q ss_pred hhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCccc-ccccc----hhhhcc-CC-CeeEcCCHHHHHHH
Q 017155 169 WMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLF-LVTNS----IDLVSG-YP-LAVLTPNVNEYKRL 241 (376)
Q Consensus 169 ~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~-ll~~~----~~ll~~-~~-~~vITPN~~E~~~L 241 (376)
.++.++++.++.-+...+...+.+.++++.++ .++++++||.... +.... .+.++. .+ .++++||..|++.|
T Consensus 121 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l 199 (313)
T 3ewm_A 121 IVEEAKIVNFGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYL 199 (313)
T ss_dssp HHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHH
T ss_pred HhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHH
Confidence 35678999887422223334567788888877 4689999997532 11100 011111 12 78999999999999
Q ss_pred hcccccCCCCCCcHHHHHHHHHHhhCCeEEEEcCC-ceEEEcCCeEEEEeeCCCC-CCCCCchHHHH-HHHHHHH-hhhh
Q 017155 242 VQKVLNCEVNDRDAPELLQSLAKQIGGVTILQKGK-SDLISDGEIAKSVSIYGSP-RRCGGQGDILS-GSVAVFL-SWAR 317 (376)
Q Consensus 242 ~g~~~~~~v~~~d~~~~a~~la~~~~~~vVllKG~-~~vi~~~~~~~~i~~~g~~-~~t~GsGDvLa-G~Iaa~L-A~~~ 317 (376)
.+... .. .....+|+..|+ +.+++++++.+++...... ..++|+||+|+ |++++++ .
T Consensus 200 ~~~~~----~~------------~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~--- 260 (313)
T 3ewm_A 200 ENQGV----EV------------KGSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKL--- 260 (313)
T ss_dssp HTTTC----CC------------CCSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHS---
T ss_pred hccCc----cc------------cCceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhc---
Confidence 87531 10 012233444454 6777777776666533222 25999999555 4555554 2
Q ss_pred ccCCcccCCCChhHHHHHHHHHHHHHHHHHHhhcCCC-CC-cHHHHHHHHH
Q 017155 318 AKGKATTSQMNPTVLGCIAGSALLRKAASLAFKDKKR-ST-LTTDIIECLG 366 (376)
Q Consensus 318 ~g~~~~~~~~~~~~~aa~~a~~l~~~ag~~a~~~~~~-~~-~a~dii~~l~ 366 (376)
+|.++ ..|+..|. .+|..+..+.|. ++ ...++.+.+.
T Consensus 261 ~g~~l--------~~a~~~A~----~~aa~~v~~~G~~~~p~~~ev~~~l~ 299 (313)
T 3ewm_A 261 KGLDL--------LKLGKFAN----LVAALSTQKRGAWSTPRKDELLKYKE 299 (313)
T ss_dssp SSCCH--------HHHHHHHH----HHHHHHTTSCSSCCCCCHHHHTTSHH
T ss_pred CCCCH--------HHHHHHHH----HHHHHHHccCCCCCCCCHHHHHHHHH
Confidence 46554 34444443 345555455442 32 3455544443
No 70
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=98.29 E-value=2.6e-06 Score=81.44 Aligned_cols=120 Identities=13% Similarity=0.137 Sum_probs=73.6
Q ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccc---hhhhccCCCeeEcCCHHHHHHHhccccc
Q 017155 171 ERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNS---IDLVSGYPLAVLTPNVNEYKRLVQKVLN 247 (376)
Q Consensus 171 ~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~---~~ll~~~~~~vITPN~~E~~~L~g~~~~ 247 (376)
+.+|++.++... .+.++++.+++ ++++||......... .++++ .+++|+||..|+..|+|....
T Consensus 139 ~~~~~v~~~~~~--------~~~~~~~~a~~---~v~~D~~~~~~~~~~~~~~~~l~--~~dil~~N~~E~~~l~g~~~~ 205 (306)
T 3bf5_A 139 DEYEYVHFSTGP--------NYLDMAKSIRS---KIIFDPSQEIHKYSKDELKKFHE--ISYMSIFNDHEYRVFREMTGL 205 (306)
T ss_dssp SCEEEEEECSSS--------SHHHHHHHCCS---EEEECCGGGGGGSCHHHHHHHHH--HCSEEEEEHHHHHHHHHHHCC
T ss_pred CCCCEEEECChH--------HHHHHHHHhCC---cEEEcCchhhhhccHHHHHHHHh--cCCEEEcCHHHHHHHhCCCCc
Confidence 568899998543 24556666654 899999852111001 12232 278999999999999986421
Q ss_pred CCCCCCcHHHHHHHHHHhhCCeEEEEcC-CceEEEcCCeEEEEeeCCCCCCCCCchHHHHHHHHHHHhhhhccCCc
Q 017155 248 CEVNDRDAPELLQSLAKQIGGVTILQKG-KSDLISDGEIAKSVSIYGSPRRCGGQGDILSGSVAVFLSWARAKGKA 322 (376)
Q Consensus 248 ~~v~~~d~~~~a~~la~~~~~~vVllKG-~~~vi~~~~~~~~i~~~g~~~~t~GsGDvLaG~Iaa~LA~~~~g~~~ 322 (376)
++ . +.- +|+..| .+.+++++++.+.+........++|+||+|+|.+.+.+. +|.++
T Consensus 206 ---~~-~----------~l~--vvvT~G~~Ga~~~~~~~~~~~~~~~v~vDttGAGDaF~ag~~~~l~---~g~~~ 262 (306)
T 3bf5_A 206 ---SS-P----------KVT--TIVTNGERGSSLFMDGKKYDFPAIPSSGDTVGAGDSFRAGLYLALY---NRRSI 262 (306)
T ss_dssp ---SS-C----------SSC--EEEEEGGGEEEEEETTEEEEEECCCCCSCCTTHHHHHHHHHHHHHH---TTCCH
T ss_pred ---Cc-c----------cEE--EEEeecccCeEEEeCCcEEEecCCcCCCCCCCccHHHHHHHHHHHH---cCCCH
Confidence 11 1 111 344444 467777777666665333234599999977766666666 77765
No 71
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=70.65 E-value=53 Score=28.78 Aligned_cols=101 Identities=19% Similarity=0.157 Sum_probs=49.5
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCC--cccccccCCceeeecccccccccCCCchhhhhhhhhhhH
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDA--APVIKSYSPELIVHPILEESYNISGLEDEERRCISSKIL 163 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~--~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (376)
|..+|-||.. .|--=-++.+|+..| |.|.-+.|+.. .+....+..+.+..... .
T Consensus 44 g~~lv~GGG~--~GlM~a~~~ga~~~G-G~viGv~p~~l~~~e~~~~~~~~~i~~~~~---------------------~ 99 (189)
T 3sbx_A 44 GWTLVWGGGH--VSAMGAVSSAARAHG-GWTVGVIPKMLVHRELADHDADELVVTETM---------------------W 99 (189)
T ss_dssp TCEEEECCBC--SHHHHHHHHHHHTTT-CCEEEEEETTTTTTTTBCTTCSEEEEESSH---------------------H
T ss_pred CCEEEECCCc--cCHHHHHHHHHHHcC-CcEEEEcCchhhhcccCCCCCCeeEEcCCH---------------------H
Confidence 7788888733 233333445566655 56666666642 22333444454443210 1
Q ss_pred HHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHH--HhhcCCCCE-EEeCCcc
Q 017155 164 AEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMK--HARQSNVPI-VIDGDGL 213 (376)
Q Consensus 164 ~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~--~a~~~~~pv-VLDpdgl 213 (376)
+.-..+++.+|++++=|| ..-+++.+.+++. +....++|+ ++|.++.
T Consensus 100 ~Rk~~m~~~sda~IalPG---G~GTLdElfe~lt~~qlg~~~kPvvlln~~gf 149 (189)
T 3sbx_A 100 ERKQVMEDRANAFITLPG---GVGTLDELLDVWTEGYLGMHDKSIVVLDPWGH 149 (189)
T ss_dssp HHHHHHHHHCSEEEECSC---CHHHHHHHHHHHHHHHTTSCCCCEEEECTTCT
T ss_pred HHHHHHHHHCCEEEEeCC---CcchHHHHHHHHHHHHhcccCCCEEEecCCcc
Confidence 122234567888877443 2333333444332 223356786 4566553
No 72
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=68.28 E-value=59 Score=28.69 Aligned_cols=101 Identities=23% Similarity=0.166 Sum_probs=46.6
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCC--cccccccCCceeeecccccccccCCCchhhhhhhhhhhH
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDA--APVIKSYSPELIVHPILEESYNISGLEDEERRCISSKIL 163 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~--~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (376)
|..+|-||. ..|----++.+|+..| |.+.-+.|+.. .+.-..+..+.++.... .
T Consensus 53 g~~lV~GGG--~~GlM~a~~~gA~~~G-G~viGv~p~~l~~~e~~~~~~~~~i~~~~~---------------------~ 108 (199)
T 3qua_A 53 GWTLVSGGG--NVSAMGAVAQAARAKG-GHTVGVIPKALVHRELADVDAAELIVTDTM---------------------R 108 (199)
T ss_dssp TCEEEECCB--CSHHHHHHHHHHHHTT-CCEEEEEEGGGTTTTTBCTTSSEEEEESSH---------------------H
T ss_pred CCEEEECCC--ccCHHHHHHHHHHHcC-CcEEEEeCchhhhccccCCCCCeeEEcCCH---------------------H
Confidence 566777763 2233333445566655 45555666532 22223344444433210 1
Q ss_pred HHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHH--HhhcCCCCEE-EeCCcc
Q 017155 164 AEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMK--HARQSNVPIV-IDGDGL 213 (376)
Q Consensus 164 ~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~--~a~~~~~pvV-LDpdgl 213 (376)
+.-.-+++.+|++++=|| ..-+++.+.+++. +....++|+| ++.++.
T Consensus 109 ~Rk~~m~~~sda~IalPG---G~GTldEl~e~lt~~qlg~~~kPvvlln~~gf 158 (199)
T 3qua_A 109 ERKREMEHRSDAFIALPG---GIGTLEEFFEAWTAGYLGMHDKPLILLDPFGH 158 (199)
T ss_dssp HHHHHHHHHCSEEEECSC---CHHHHHHHHHHHHHHHTTSCCCCEEEECTTST
T ss_pred HHHHHHHHhcCccEEeCC---CccHHHHHHHHHHHHHhccCCCCEEEEcCCcc
Confidence 122234556788777443 2333333444332 2233567864 566553
No 73
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=58.45 E-value=70 Score=28.48 Aligned_cols=45 Identities=20% Similarity=0.235 Sum_probs=29.2
Q ss_pred HHHHHhhccCCEEEEcCCCCCCH-HHHHHHHHHHHHhhcCCCCEEE
Q 017155 164 AEVDKWMERFDCLVVGPGLGRDP-YLLECVSEIMKHARQSNVPIVI 208 (376)
Q Consensus 164 ~~l~~~l~~~davvIGpGl~~~~-~~~~~~~~il~~a~~~~~pvVL 208 (376)
+.+.+.++.+|+|+...|..... ........+++.+++.+++-|+
T Consensus 57 ~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv 102 (289)
T 3e48_A 57 ESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHII 102 (289)
T ss_dssp HHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEE
Confidence 45666678899999987765432 2344556677777777765333
No 74
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=57.21 E-value=48 Score=29.86 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=27.2
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccC
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~ 123 (376)
-+|+|||. +|.|-..+..-.++|+|-++++-...
T Consensus 32 ~~VlVvG~----Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGL----GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECC----SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEee----CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 47999875 67888888888889999999876654
No 75
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=53.84 E-value=81 Score=27.42 Aligned_cols=35 Identities=20% Similarity=0.094 Sum_probs=20.8
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccC
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~ 123 (376)
|..+|-||. ..|----++.+|+..| |.+.-+.|+.
T Consensus 33 g~~lV~GGg--~~GiM~aa~~gA~~~g-G~~iGv~p~~ 67 (191)
T 1t35_A 33 GIGLVYGGS--RVGLMGTIADAIMENG-GTAIGVMPSG 67 (191)
T ss_dssp TCEEEECCC--CSHHHHHHHHHHHTTT-CCEEEEEETT
T ss_pred CCEEEECCC--cccHHHHHHHHHHHcC-CeEEEEeCch
Confidence 777888873 3343334456666666 4566666654
No 76
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=50.85 E-value=14 Score=37.39 Aligned_cols=159 Identities=13% Similarity=0.131 Sum_probs=78.8
Q ss_pred cchhHhhhhHHhHhhhCCCCCccCcccccccccccCccccCChhhHHHhhCCCCCCCCCCCCCCeEEEEecCCCCCCHHH
Q 017155 23 ASSAVFRRQQFLIRSLGGYSDHIEPRRMQDIRSMSGTTFEADAENVMREITPVLDPSKHKGQAGKIAVIGGCREYTGAPY 102 (376)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~r~~~~hKg~~G~vliIgGs~~~~GA~i 102 (376)
.|+-|-||.--+.-.+|-|.+-.++.|--.=-|+..+.- +.++.+++... .-+ ..+...+|.|+- |+.+
T Consensus 80 ~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssll~~lt----n~l~ld~L~~~---G~~-~~~~~flVnGsT---gg~l 148 (501)
T 3hl2_A 80 ASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKIT----NSLVLDIIKLA---GVH-TVANCFVVPMAT---GMSL 148 (501)
T ss_dssp SCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHHHHHHH----HHHHHHHHHHT---TCT-TCCEEEEESSCH---HHHH
T ss_pred HHHHHHhhccCcccCCCCccccccCCCCccchHHHHHHH----HHHHHHHHHHc---CCC-CCCcEEEECcHH---HHHH
Confidence 446777888778888888877666544443334444322 23333333322 111 234578888864 4444
Q ss_pred HHHHHHHhc---ccCeeEEecccCCcc-cc-----cccCCceeeecccccccccCCCchhhhhhhhhhhHHHHHHhhc-c
Q 017155 103 FAAISALKI---GADLSHVFCTKDAAP-VI-----KSYSPELIVHPILEESYNISGLEDEERRCISSKILAEVDKWME-R 172 (376)
Q Consensus 103 lAa~aAlr~---Gaglvt~~t~~~~~~-~i-----~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~ 172 (376)
...+++.+- |+..| +.|.+... ++ ....|..+...+.++. ..++.+.+++..+... +
T Consensus 149 amilaa~r~~rpg~d~V--IvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~-----------~~id~e~le~aI~e~ga~ 215 (501)
T 3hl2_A 149 TLCFLTLRHKRPKAKYI--IWPRIDQKSCFKSMITAGFEPVVIENVLEGDE-----------LRTDLKAVEAKVQELGPD 215 (501)
T ss_dssp HHHHHHHHHHCTTCCEE--EEECCCCHHHHHHHHHTTCEEEEECEEEETTE-----------EEECHHHHHHHHHHHCGG
T ss_pred HHHHHHcCcccCCCCEE--EEecchHHHHHHHHHHcCCeEEEEeeeecccc-----------cCCCHHHHHHHHHhcCCC
Confidence 445555554 44543 34665543 32 2334443332211111 1233344444433221 1
Q ss_pred CCEEEEc------CCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 173 FDCLVVG------PGLGRDPYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 173 ~davvIG------pGl~~~~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
.-++++. |+...+ ++++.+.++++++|+++|..
T Consensus 216 ~i~~V~~Ttt~y~p~~~dd------I~eIaeIch~~gIpllVDeA 254 (501)
T 3hl2_A 216 CILCIHSTTSCFAPRVPDR------LEELAVICANYDIPHIVNNA 254 (501)
T ss_dssp GEEEEEEECSCCTTBCCCC------HHHHHHHHHHHTCCEEEECT
T ss_pred cEEEEEecCCCCCCccccc------HHHHHHHHHHcCCeEEEeCc
Confidence 2233322 223333 45556667778999999964
No 77
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=49.70 E-value=19 Score=33.55 Aligned_cols=51 Identities=16% Similarity=0.217 Sum_probs=38.6
Q ss_pred hhHHHHHHhhccCCEEEEc-CCCCCC------HHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 161 KILAEVDKWMERFDCLVVG-PGLGRD------PYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 161 ~~~~~l~~~l~~~davvIG-pGl~~~------~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
+.++++.++++...++.|| .||... +...+++...++.|++.+.||+|=..
T Consensus 78 ~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r 135 (287)
T 3rcm_A 78 DSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHER 135 (287)
T ss_dssp THHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3456777777788899999 666431 34567888888999999999999654
No 78
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=45.85 E-value=1.4e+02 Score=25.54 Aligned_cols=121 Identities=17% Similarity=0.064 Sum_probs=57.3
Q ss_pred CeEEEEecC-CCCCCHHHHHHHHHHhcccCeeEEecccCCcccccccCCceeeecccccccccCCCchhhhhhhhhhhHH
Q 017155 86 GKIAVIGGC-REYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILA 164 (376)
Q Consensus 86 G~vliIgGs-~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (376)
|..+|-||. .+-.|| ++.+|+..| |.+..+.|+...........+.++...-.+ . +
T Consensus 45 g~~lVsGGg~~Gim~a---a~~gAl~~g-G~tigVlP~~~~~~~~~~~~~~i~~~~~~~----------R---------k 101 (176)
T 2iz6_A 45 GWILLTGGRSLGVMHE---AMKGAKEAG-GTTIGVLPGPDTSEISDAVDIPIVTGLGSA----------R---------D 101 (176)
T ss_dssp TCEEEEECSSSSHHHH---HHHHHHHTT-CCEEEEECC-----CCTTCSEEEECCCCSS----------S---------C
T ss_pred CCEEEECCCccCHhHH---HHHHHHHcC-CEEEEEeCchhhhhhccCCceeEEcCCHHH----------H---------H
Confidence 888999985 444444 455666666 455556676533333333334433221100 0 0
Q ss_pred HHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCCcccccccchhhhcc--CCCeeEcCCHHHHHHHh
Q 017155 165 EVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGDGLFLVTNSIDLVSG--YPLAVLTPNVNEYKRLV 242 (376)
Q Consensus 165 ~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpdgl~ll~~~~~ll~~--~~~~vITPN~~E~~~L~ 242 (376)
.-+...+|++++=|| ..-+++.+.+.+ +.++|+++=+. .-.. ..+++. ....++..++.|+-..+
T Consensus 102 --~~m~~~sda~IvlpG---g~GTL~E~~~al----~~~kpV~~l~~--~~~~--~gfi~~~~~~~i~~~~~~~e~~~~l 168 (176)
T 2iz6_A 102 --NINALSSNVLVAVGM---GPGTAAEVALAL----KAKKPVVLLGT--QPEA--EKFFTSLDAGLVHVAADVAGAIAAV 168 (176)
T ss_dssp --CCCGGGCSEEEEESC---CHHHHHHHHHHH----HTTCCEEEESC--CHHH--HHHHHHHCTTTEEEESSHHHHHHHH
T ss_pred --HHHHHhCCEEEEecC---CccHHHHHHHHH----HhCCcEEEEcC--cccc--cccCChhhcCeEEEcCCHHHHHHHH
Confidence 112345787777554 234444444444 36788876554 1111 112211 22455666666655443
No 79
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=44.65 E-value=50 Score=33.20 Aligned_cols=117 Identities=15% Similarity=0.197 Sum_probs=64.5
Q ss_pred CCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcc----c---ccccCCceeeecccccccccCCC
Q 017155 78 PSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAP----V---IKSYSPELIVHPILEESYNISGL 150 (376)
Q Consensus 78 ~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~----~---i~~~~pe~~~~~~~~~~~~~~~~ 150 (376)
+.+.|-..|++.+.++. +.....+-.+.+.+.+|+..+.+-+...... . +....|++.+.. . ++
T Consensus 210 p~a~~d~~grL~v~aav-G~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~---g--~v--- 280 (496)
T 4fxs_A 210 PNACKDEQGRLRVGAAV-GAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG---G--NV--- 280 (496)
T ss_dssp TTCCBCTTSCBCCEEEC-CSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEE---E--EE---
T ss_pred cchhhhcccceeeeeee-ccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEE---c--cc---
Confidence 45566667776665543 3344446667777888999988876654321 1 223335432211 0 00
Q ss_pred chhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCC----------HHHHHHHHHHHHHhhcCCCCEEEeCCc
Q 017155 151 EDEERRCISSKILAEVDKWMERFDCLVVGPGLGRD----------PYLLECVSEIMKHARQSNVPIVIDGDG 212 (376)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~----------~~~~~~~~~il~~a~~~~~pvVLDpdg 212 (376)
.+.+....+.+ ..+|+|++|.|-+.. ......+.++.+.+++.++|+|-|...
T Consensus 281 -------~t~e~a~~l~~--aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI 343 (496)
T 4fxs_A 281 -------ATAEGARALIE--AGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGI 343 (496)
T ss_dssp -------CSHHHHHHHHH--HTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCC
T ss_pred -------CcHHHHHHHHH--hCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCC
Confidence 11222334433 268999996332221 123456677776666678999988753
No 80
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=40.39 E-value=2.3e+02 Score=28.30 Aligned_cols=14 Identities=21% Similarity=0.323 Sum_probs=10.3
Q ss_pred eeEcCCHHHHHHHh
Q 017155 229 AVLTPNVNEYKRLV 242 (376)
Q Consensus 229 ~vITPN~~E~~~L~ 242 (376)
.+++.++.|+...+
T Consensus 315 ~iv~DdpeEvl~~i 328 (462)
T 3gh1_A 315 SIAIDNPAEAARIM 328 (462)
T ss_dssp EEEESCHHHHHHHH
T ss_pred EEEcCCHHHHHHHH
Confidence 46788888877765
No 81
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=40.22 E-value=1.5e+02 Score=29.55 Aligned_cols=117 Identities=17% Similarity=0.208 Sum_probs=62.2
Q ss_pred CCCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcc----c---ccccCCceeeecccccccccCCC
Q 017155 78 PSKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAP----V---IKSYSPELIVHPILEESYNISGL 150 (376)
Q Consensus 78 ~~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~----~---i~~~~pe~~~~~~~~~~~~~~~~ 150 (376)
+.+.|-..|++.+-++. +...-.+-.+.+.+.+|+..+.+-+...... . +....|++.+.. . +
T Consensus 208 p~a~kd~~grl~v~aav-G~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~-g----~---- 277 (490)
T 4avf_A 208 PLASKDEQGRLRVGAAV-GTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIG-G----N---- 277 (490)
T ss_dssp TTCCBCTTSCBCCEEEE-CSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEE-E----E----
T ss_pred cchhhhccCcceeeeee-ccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEE-e----e----
Confidence 45556666766554432 2233345556677778999888765543321 1 233345522211 0 0
Q ss_pred chhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCCC----------HHHHHHHHHHHHHhhcCCCCEEEeCCc
Q 017155 151 EDEERRCISSKILAEVDKWMERFDCLVVGPGLGRD----------PYLLECVSEIMKHARQSNVPIVIDGDG 212 (376)
Q Consensus 151 ~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~~----------~~~~~~~~~il~~a~~~~~pvVLDpdg 212 (376)
..+.+....+.+ ..+|+|++|.|-+.. ......+.++.+.+++.++|+|-|..-
T Consensus 278 ------v~t~e~a~~l~~--aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI 341 (490)
T 4avf_A 278 ------IATAEAAKALAE--AGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGI 341 (490)
T ss_dssp ------ECSHHHHHHHHH--TTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCC
T ss_pred ------eCcHHHHHHHHH--cCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCC
Confidence 012223334433 268999996332221 123556677776666678999988753
No 82
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=40.19 E-value=98 Score=27.79 Aligned_cols=33 Identities=18% Similarity=0.100 Sum_probs=24.9
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEeccc
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTK 122 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~ 122 (376)
-+|+|||- +|.|-..+..-.++|.|-++++=..
T Consensus 29 ~~VlvvG~----GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGL----GGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp CEEEEECC----STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred CcEEEEcc----CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 58888864 6667677777788899999987443
No 83
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=35.34 E-value=1.1e+02 Score=31.35 Aligned_cols=116 Identities=17% Similarity=0.173 Sum_probs=68.7
Q ss_pred CCCCC-CCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCccc-------ccccCCceeeecccccccccCC
Q 017155 78 PSKHK-GQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPV-------IKSYSPELIVHPILEESYNISG 149 (376)
Q Consensus 78 ~~~hK-g~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~-------i~~~~pe~~~~~~~~~~~~~~~ 149 (376)
|++.| -..|+.+ +|..-+..+-..--+.+-..+|++++.+=+.+..... ++...|++.+.. .+
T Consensus 259 p~A~k~d~~grL~-VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~via---GN----- 329 (556)
T 4af0_A 259 PYASKVPESKQLY-CGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIA---GN----- 329 (556)
T ss_dssp TTCCBCTTTCCBC-CEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEE---EE-----
T ss_pred Ccchhcchhhcee-eEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEe---cc-----
Confidence 45556 3345443 4444455555666666777889999988877665432 334456643321 00
Q ss_pred CchhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCC----------CHHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 150 LEDEERRCISSKILAEVDKWMERFDCLVVGPGLGR----------DPYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~----------~~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
-.+.+..+.+.+ .-+|+|++|.|-|. ...+...+.+..+.+++.++|+|-|..
T Consensus 330 -------VaT~e~a~~Li~--aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGG 392 (556)
T 4af0_A 330 -------VVTREQAAQLIA--AGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGG 392 (556)
T ss_dssp -------ECSHHHHHHHHH--HTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESC
T ss_pred -------ccCHHHHHHHHH--cCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCC
Confidence 012233344433 26899999955431 113456677777778889999999985
No 84
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=34.78 E-value=38 Score=32.20 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=37.6
Q ss_pred hHHHHHHhhcc--CCEEEEc-CCCCCC-------HHHHHHHHHHHHHhhc-CCCCEEEeCCc
Q 017155 162 ILAEVDKWMER--FDCLVVG-PGLGRD-------PYLLECVSEIMKHARQ-SNVPIVIDGDG 212 (376)
Q Consensus 162 ~~~~l~~~l~~--~davvIG-pGl~~~-------~~~~~~~~~il~~a~~-~~~pvVLDpdg 212 (376)
.++++.++++. ..++.|| .||... +...+++...++.|++ .+.||||=...
T Consensus 116 ~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~ 177 (325)
T 3ipw_A 116 YLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRK 177 (325)
T ss_dssp HHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEES
T ss_pred HHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCc
Confidence 45667776654 4799999 666421 3567788888999999 99999998753
No 85
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=34.54 E-value=50 Score=29.29 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=34.9
Q ss_pred hHHHHHHhhccCCEEEEc-CCCCC------CHHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 162 ILAEVDKWMERFDCLVVG-PGLGR------DPYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 162 ~~~~l~~~l~~~davvIG-pGl~~------~~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
.++++.++++...++.|| .|+.. .+...+.+...++.+++.+.||++=..
T Consensus 77 ~~~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~ 133 (264)
T 1xwy_A 77 TEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCR 133 (264)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcC
Confidence 456777777777788887 44432 133345677888888889999999864
No 86
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=32.06 E-value=81 Score=29.56 Aligned_cols=26 Identities=15% Similarity=0.248 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHhhcCCCC---EEEeCC
Q 017155 186 PYLLECVSEIMKHARQSNVP---IVIDGD 211 (376)
Q Consensus 186 ~~~~~~~~~il~~a~~~~~p---vVLDpd 211 (376)
++..+.+.+.++.+.+.|++ +||||-
T Consensus 167 ~ev~~~l~~~i~~a~~~Gi~~~~IilDPG 195 (294)
T 2y5s_A 167 TDVRDFLAARAQALRDAGVAAERICVDPG 195 (294)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCChhhEEEeCC
Confidence 34567777888888888987 999994
No 87
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=31.00 E-value=3e+02 Score=27.54 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=59.2
Q ss_pred CCCCCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcc----c---ccccCCc--eeeecccccccccCC
Q 017155 79 SKHKGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAP----V---IKSYSPE--LIVHPILEESYNISG 149 (376)
Q Consensus 79 ~~hKg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~----~---i~~~~pe--~~~~~~~~~~~~~~~ 149 (376)
++.|-..|++.+.++.... .-.+-.+.+.+.+|+..+.+-+...... . +....|+ ++...+.
T Consensus 236 ~a~~D~~~rl~V~aavg~~-~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~-------- 306 (511)
T 3usb_A 236 NSAKDKQGRLLVGAAVGVT-ADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA-------- 306 (511)
T ss_dssp TCCBCTTSCBCCEEEECSS-TTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC--------
T ss_pred cchhhhccceeeeeeeeec-cchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeec--------
Confidence 3445555555444433222 2234445566777999988876654211 1 2233354 2222211
Q ss_pred CchhhhhhhhhhhHHHHHHhhccCCEEEEcCCCCC----------CHHHHHHHHHHHHHhhcCCCCEEEeCCc
Q 017155 150 LEDEERRCISSKILAEVDKWMERFDCLVVGPGLGR----------DPYLLECVSEIMKHARQSNVPIVIDGDG 212 (376)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~l~~~davvIGpGl~~----------~~~~~~~~~~il~~a~~~~~pvVLDpdg 212 (376)
+.+....+.+ ..+|+|++|.|-+. .......+.++.+.+++.++|+|.|...
T Consensus 307 ---------t~e~a~~~~~--aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI 368 (511)
T 3usb_A 307 ---------TAEATKALIE--AGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGI 368 (511)
T ss_dssp ---------SHHHHHHHHH--HTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCC
T ss_pred ---------cHHHHHHHHH--hCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCC
Confidence 1222333333 26899999754332 0123456666666666678999998863
No 88
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=30.12 E-value=2.4e+02 Score=26.15 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=26.1
Q ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccC
Q 017155 84 QAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKD 123 (376)
Q Consensus 84 ~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~ 123 (376)
..-+|+|||- +|-|--.+..-.++|.|-++++=...
T Consensus 35 ~~~~VlVvGa----GGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGV----GGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECC----SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECc----CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3468999964 56666677777788999998875443
No 89
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=29.20 E-value=29 Score=31.83 Aligned_cols=44 Identities=20% Similarity=0.323 Sum_probs=33.6
Q ss_pred HhhccCCEEEEc-CCCCCC-HHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 168 KWMERFDCLVVG-PGLGRD-PYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 168 ~~l~~~davvIG-pGl~~~-~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
+.++...++.|| .|+... +...+++...++.+++.+.||+|=..
T Consensus 86 ~~l~~~~vvaIGEiGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r 131 (261)
T 3guw_A 86 GYLEEGEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTP 131 (261)
T ss_dssp HHHTTSCCSCEEEEECSSCCHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHhCcCCeEEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEEEcC
Confidence 344456788888 777643 55677888889999999999999775
No 90
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=28.96 E-value=59 Score=31.93 Aligned_cols=51 Identities=20% Similarity=0.200 Sum_probs=37.8
Q ss_pred hHHHHHHhh------ccCCEEEEc-CCCCCC-------HHHHHHHHHHHHHhhcC----CCCEEEeCCc
Q 017155 162 ILAEVDKWM------ERFDCLVVG-PGLGRD-------PYLLECVSEIMKHARQS----NVPIVIDGDG 212 (376)
Q Consensus 162 ~~~~l~~~l------~~~davvIG-pGl~~~-------~~~~~~~~~il~~a~~~----~~pvVLDpdg 212 (376)
.++++.+++ ....++.|| .||... +.+.+++..-++.|++. +.||||=...
T Consensus 137 ~l~~L~~l~~~~~~~~~~~vvAIGEiGLDy~~~~~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~ 205 (401)
T 3e2v_A 137 KLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRS 205 (401)
T ss_dssp HHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCTTTSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEES
T ss_pred HHHHHHHHHHhhhhccCCcEEEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEecc
Confidence 456666665 356899999 777531 45677888888999999 9999997653
No 91
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=28.47 E-value=63 Score=32.19 Aligned_cols=20 Identities=15% Similarity=0.368 Sum_probs=15.2
Q ss_pred HHHHHHHhhcCCCCEEEeCC
Q 017155 192 VSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 192 ~~~il~~a~~~~~pvVLDpd 211 (376)
+.++.+.++++++|+++|..
T Consensus 217 l~~Ia~ia~~~gi~l~VD~A 236 (450)
T 3bc8_A 217 LEELAVICANYDIPHVVNNA 236 (450)
T ss_dssp HHHHHHHHHHHTCCEEEECT
T ss_pred HHHHHHHHHHCCCeEEEECC
Confidence 45556667778999999964
No 92
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=27.06 E-value=3.3e+02 Score=24.04 Aligned_cols=34 Identities=18% Similarity=-0.010 Sum_probs=18.7
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEeccc
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTK 122 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~ 122 (376)
|..+|-||.. .|--=-++.+|+..| |.+.-+.|+
T Consensus 41 g~~lV~GGg~--~GlM~aa~~gA~~~G-G~~iGv~p~ 74 (216)
T 1ydh_A 41 KIDLVYGGGS--VGLMGLISRRVYEGG-LHVLGIIPK 74 (216)
T ss_dssp TCEEEECCCS--SHHHHHHHHHHHHTT-CCEEEEEEG
T ss_pred CCEEEECCCc--ccHhHHHHHHHHHcC-CcEEEEech
Confidence 6778888742 122222345666665 455556564
No 93
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=26.28 E-value=1.2e+02 Score=28.82 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=26.0
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEec
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFC 120 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t 120 (376)
-+|+||| .+|.|--.+..-.++|.|-+|++=
T Consensus 37 ~~VlivG----~GGlG~~ia~~La~~Gvg~itlvD 67 (346)
T 1y8q_A 37 SRVLLVG----LKGLGAEIAKNLILAGVKGLTMLD 67 (346)
T ss_dssp CEEEEEC----CSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEEEC----CCHHHHHHHHHHHHcCCCEEEEEE
Confidence 5889886 468888888888899999999983
No 94
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=26.13 E-value=4.4e+02 Score=26.21 Aligned_cols=14 Identities=0% Similarity=0.097 Sum_probs=9.9
Q ss_pred eeEcCCHHHHHHHh
Q 017155 229 AVLTPNVNEYKRLV 242 (376)
Q Consensus 229 ~vITPN~~E~~~L~ 242 (376)
.+++-++.|+.+.+
T Consensus 313 iiv~ddpeEal~~l 326 (460)
T 3bq9_A 313 KIIIDDPAAVAQHM 326 (460)
T ss_dssp EEEESCHHHHHHHH
T ss_pred EEEeCCHHHHHHHH
Confidence 35678888877665
No 95
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=24.81 E-value=59 Score=29.61 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=35.9
Q ss_pred hhHHHHHHhhccCCEEEEc-CCCCCC-------HHHHHHHHHHHHHhhcCCCCEE-EeCCc
Q 017155 161 KILAEVDKWMERFDCLVVG-PGLGRD-------PYLLECVSEIMKHARQSNVPIV-IDGDG 212 (376)
Q Consensus 161 ~~~~~l~~~l~~~davvIG-pGl~~~-------~~~~~~~~~il~~a~~~~~pvV-LDpdg 212 (376)
++++++.+++.+ ++.|| .||... +...+++...++.|++.+.||| |=...
T Consensus 69 ~~l~~l~~~~~~--~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~ 127 (254)
T 3gg7_A 69 ADLPWFDRYLPE--TRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRR 127 (254)
T ss_dssp GGTHHHHHHGGG--CSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHhhh--ccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 345677777754 57788 777642 2466778888899999999999 86653
No 96
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=24.62 E-value=81 Score=27.77 Aligned_cols=50 Identities=22% Similarity=0.333 Sum_probs=33.3
Q ss_pred hHHHHHHhhcc--CCEEEEc-CCCCC------CHHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 162 ILAEVDKWMER--FDCLVVG-PGLGR------DPYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 162 ~~~~l~~~l~~--~davvIG-pGl~~------~~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
.++++.+++.. ..++.|| .|+.. .+...+.+...++.+.+.++||++=..
T Consensus 77 ~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~ 135 (259)
T 1zzm_A 77 SLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSR 135 (259)
T ss_dssp HHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 35566665544 5667776 34431 133456788888888899999999874
No 97
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=24.15 E-value=1.2e+02 Score=26.71 Aligned_cols=41 Identities=10% Similarity=0.074 Sum_probs=20.9
Q ss_pred HHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCC
Q 017155 164 AEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVP 205 (376)
Q Consensus 164 ~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~p 205 (376)
+.+.+.++.+|+|+-..|...+ ........+++.+++.+++
T Consensus 57 ~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~l~~a~~~~~~~ 97 (286)
T 2zcu_A 57 AALTSALQGVEKLLLISSSEVG-QRAPQHRNVINAAKAAGVK 97 (286)
T ss_dssp HHHHHHTTTCSEEEECC---------CHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCCEEEEeCCCCch-HHHHHHHHHHHHHHHcCCC
Confidence 3455667789999887654321 1233445556655555554
No 98
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=22.70 E-value=3.4e+02 Score=24.26 Aligned_cols=81 Identities=23% Similarity=0.314 Sum_probs=44.7
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCCcccccccCCceeeecccccccccCCCchhhhhhhhhhhHH
Q 017155 85 AGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDAAPVIKSYSPELIVHPILEESYNISGLEDEERRCISSKILA 164 (376)
Q Consensus 85 ~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~~~~i~~~~pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (376)
.||+.+|.|. ..|=|.-.++.-.+.|+-++-+--.++. .-....+++...+.. + + .+++++
T Consensus 10 ~GK~alVTGa--s~GIG~aia~~la~~Ga~Vv~~~~~~~~--~~~~~~~~~~~~~~D-----v---~-------~~~~v~ 70 (242)
T 4b79_A 10 AGQQVLVTGG--SSGIGAAIAMQFAELGAEVVALGLDADG--VHAPRHPRIRREELD-----I---T-------DSQRLQ 70 (242)
T ss_dssp TTCEEEEETT--TSHHHHHHHHHHHHTTCEEEEEESSTTS--TTSCCCTTEEEEECC-----T---T-------CHHHHH
T ss_pred CCCEEEEeCC--CCHHHHHHHHHHHHCCCEEEEEeCCHHH--HhhhhcCCeEEEEec-----C---C-------CHHHHH
Confidence 3899988884 4455555566777778876544433222 112222333332221 0 0 123455
Q ss_pred HHHHhhccCCEEEEcCCCCC
Q 017155 165 EVDKWMERFDCLVVGPGLGR 184 (376)
Q Consensus 165 ~l~~~l~~~davvIGpGl~~ 184 (376)
++.+.+.+.|++|=+-|+..
T Consensus 71 ~~~~~~g~iDiLVNNAGi~~ 90 (242)
T 4b79_A 71 RLFEALPRLDVLVNNAGISR 90 (242)
T ss_dssp HHHHHCSCCSEEEECCCCCC
T ss_pred HHHHhcCCCCEEEECCCCCC
Confidence 66666678898888877653
No 99
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=22.18 E-value=2.7e+02 Score=23.67 Aligned_cols=18 Identities=22% Similarity=0.398 Sum_probs=13.2
Q ss_pred HHhhccCCEEEEcCCCCC
Q 017155 167 DKWMERFDCLVVGPGLGR 184 (376)
Q Consensus 167 ~~~l~~~davvIGpGl~~ 184 (376)
.+.++..|+|+-..|...
T Consensus 79 ~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 79 SHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp GGGGTTCSEEEECCCCCT
T ss_pred HHHHcCCCEEEECCCCCC
Confidence 344668999999877654
No 100
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=21.97 E-value=3.5e+02 Score=22.60 Aligned_cols=43 Identities=16% Similarity=0.273 Sum_probs=26.8
Q ss_pred HHHHHhhccCCEEEEcCCCCCCHHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 164 AEVDKWMERFDCLVVGPGLGRDPYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 164 ~~l~~~l~~~davvIGpGl~~~~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
+.+.+.++.+|+|+...|.. +. + .+.+++.+++.+.+-|+-..
T Consensus 65 ~~~~~~~~~~d~vv~~ag~~-n~---~-~~~~~~~~~~~~~~~iv~iS 107 (221)
T 3r6d_A 65 GXLEQAVTNAEVVFVGAMES-GS---D-MASIVKALSRXNIRRVIGVS 107 (221)
T ss_dssp HHHHHHHTTCSEEEESCCCC-HH---H-HHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHcCCCEEEEcCCCC-Ch---h-HHHHHHHHHhcCCCeEEEEe
Confidence 45555667899999987753 22 2 55566666666665555443
No 101
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=21.74 E-value=2.1e+02 Score=25.06 Aligned_cols=45 Identities=20% Similarity=0.221 Sum_probs=26.7
Q ss_pred HHHHHhhccCCEEEEcCCCCCCH-HHHHHHHHHHHHhhcCCCCEEE
Q 017155 164 AEVDKWMERFDCLVVGPGLGRDP-YLLECVSEIMKHARQSNVPIVI 208 (376)
Q Consensus 164 ~~l~~~l~~~davvIGpGl~~~~-~~~~~~~~il~~a~~~~~pvVL 208 (376)
+.+.+.++.+|+|+-..|...+. ........+++.+++.+++-++
T Consensus 58 ~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v 103 (287)
T 2jl1_A 58 ESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIA 103 (287)
T ss_dssp HHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 34556677899998876653322 1234455666766666664444
No 102
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=21.53 E-value=62 Score=29.70 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=35.2
Q ss_pred hHHHHHHhhcc--CCEEEEc-CCCCC-----C--HHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 162 ILAEVDKWMER--FDCLVVG-PGLGR-----D--PYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 162 ~~~~l~~~l~~--~davvIG-pGl~~-----~--~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
.++++.++++. ..++.|| .|+.. . +...+.+...++.+++.+.||+|=..
T Consensus 89 ~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r 148 (301)
T 2xio_A 89 YLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCR 148 (301)
T ss_dssp HHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 45677776654 3688888 45531 1 34456788888888889999999764
No 103
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=20.97 E-value=68 Score=31.55 Aligned_cols=49 Identities=24% Similarity=0.435 Sum_probs=35.3
Q ss_pred HHHHHHhhccCCEEEEcCCCCC---------------CHHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 163 LAEVDKWMERFDCLVVGPGLGR---------------DPYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 163 ~~~l~~~l~~~davvIGpGl~~---------------~~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
+.-++.+++++|.++||.||.. +++..+..+++++++++++++++|=-|
T Consensus 209 i~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~e~d~~~~a~~ll~~a~~~g~~i~LPvD 272 (403)
T 3q3v_A 209 LQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVD 272 (403)
T ss_dssp HHHHHHHTTTCSEEEECSTTHHHHHHHTTCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEECCSE
T ss_pred HHHHHHHHHhcCEEEECcHHHHHHHHHcCCCcCccccchhhHHHHHHHHHHHHHcCCEEECCce
Confidence 5667788899999999966531 234567778888888778877766443
No 104
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=20.94 E-value=2.6e+02 Score=26.57 Aligned_cols=36 Identities=8% Similarity=0.085 Sum_probs=28.6
Q ss_pred CCCCCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecc
Q 017155 82 KGQAGKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCT 121 (376)
Q Consensus 82 Kg~~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~ 121 (376)
|-..-+|+|||- +|.|--.+..-.++|+|-++++=.
T Consensus 31 kL~~~~VlIvGa----GGlGs~va~~La~aGVg~ItlvD~ 66 (340)
T 3rui_A 31 IIKNTKVLLLGA----GTLGCYVSRALIAWGVRKITFVDN 66 (340)
T ss_dssp HHHTCEEEEECC----SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHhCCEEEEECC----CHHHHHHHHHHHHcCCCEEEEecC
Confidence 445678999964 788888888888899999998744
No 105
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=20.38 E-value=1.2e+02 Score=27.03 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=34.6
Q ss_pred hHHHHHHhhccCCEEEEc-CCCCC------CHHHHHHHHHHHHHhhcCCCCEEEeCC
Q 017155 162 ILAEVDKWMERFDCLVVG-PGLGR------DPYLLECVSEIMKHARQSNVPIVIDGD 211 (376)
Q Consensus 162 ~~~~l~~~l~~~davvIG-pGl~~------~~~~~~~~~~il~~a~~~~~pvVLDpd 211 (376)
.++++.++++...++.|| .|+.. .....+.+...++.+.+.+.||++=+.
T Consensus 85 ~~~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~ 141 (268)
T 1j6o_A 85 FIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIR 141 (268)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 456777777666677776 33321 133456778888888889999999875
No 106
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=20.38 E-value=3.7e+02 Score=22.28 Aligned_cols=42 Identities=17% Similarity=0.149 Sum_probs=26.4
Q ss_pred hhccCCEEEEcCCCC----CCHHHHHHHHHHHHHhhcCCCCEEEeC
Q 017155 169 WMERFDCLVVGPGLG----RDPYLLECVSEIMKHARQSNVPIVIDG 210 (376)
Q Consensus 169 ~l~~~davvIGpGl~----~~~~~~~~~~~il~~a~~~~~pvVLDp 210 (376)
.++.+|+|+-.-|.. ...........+++.+++.+.++|+=.
T Consensus 59 ~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 59 DLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp HHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred hcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 356889999887763 122345556677777776665555543
No 107
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=20.34 E-value=4.6e+02 Score=24.85 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=20.8
Q ss_pred CCeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEe
Q 017155 85 AGKIAVIGGCREYTGAPYFAAISALKIGADLSHVF 119 (376)
Q Consensus 85 ~G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~ 119 (376)
.-+|+|+||. .-+.+-+.++.+.|.-.+.+-
T Consensus 24 ~~~I~ilGgG----~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGG----QLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCEEEEECCS----HHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCC----HHHHHHHHHHHHCCCEEEEEE
Confidence 3589999985 355666777778786544443
No 108
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=20.31 E-value=2.2e+02 Score=27.95 Aligned_cols=34 Identities=21% Similarity=0.083 Sum_probs=21.8
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCC
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDA 124 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~ 124 (376)
-+|+||||-. .+.-.+..-++.|+ -|+++.++..
T Consensus 13 ~~vlVvGgG~----va~~k~~~L~~~ga-~V~vi~~~~~ 46 (457)
T 1pjq_A 13 RDCLIVGGGD----VAERKARLLLEAGA-RLTVNALTFI 46 (457)
T ss_dssp CEEEEECCSH----HHHHHHHHHHHTTB-EEEEEESSCC
T ss_pred CEEEEECCCH----HHHHHHHHHHhCcC-EEEEEcCCCC
Confidence 4799999842 44444555566687 4777777543
No 109
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.02 E-value=4.5e+02 Score=23.08 Aligned_cols=36 Identities=17% Similarity=0.020 Sum_probs=18.9
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHHhcccCeeEEecccCC
Q 017155 86 GKIAVIGGCREYTGAPYFAAISALKIGADLSHVFCTKDA 124 (376)
Q Consensus 86 G~vliIgGs~~~~GA~ilAa~aAlr~Gaglvt~~t~~~~ 124 (376)
|..+|-||.. .|----++.+|+..| |.+..+.|...
T Consensus 45 G~~vVsGGg~--~GiM~aa~~gAl~~G-G~tiGVlP~~~ 80 (215)
T 2a33_A 45 NIDLVYGGGS--IGLMGLVSQAVHDGG-RHVIGIIPKTL 80 (215)
T ss_dssp TCEEEECCCS--SHHHHHHHHHHHHTT-CCEEEEEESSC
T ss_pred CCEEEECCCh--hhHhHHHHHHHHHcC-CcEEEEcchHh
Confidence 6777777732 232223445566665 34555556654
Done!