Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>017157
MATLAGNVGLKISPRLEFRGLLIPWISKNNAISCVKGRDYSSSFPVRYVPKKSVKIKESE
NSVPVKGLERNELRKQPDASGLRTEVSNSGRDVKKPLKIYEPKNSVPVNGLQRNELQKQS
DASELRTEVSNSGRDVKTSFASHKKFQNHNRMTNNNILLDAAKQEFGEEISCEHGLFEES
EVFEEPQEVAEEMKILQQKDFYLQAAKARQDAENLAVKLLATRAFTAVEMRKKLNGKKFP
SHVIEAVITDFQSRGLINDSLYAESYSRSRWSSASWGPRRIKQALFKKGISQTDAKKAVN
LVFRDGESDEDQESKLGMSKHSIDRLFVQASKQWLRSQGAPKETRKSRIIHWLQYRGFNW
CVTSFILKKLESQYPS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017157
        (376 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006340 - symbol:AT3G13226 "AT3G13226" speci...   518  9.5e-50   1


>TAIR|locus:505006340 [details] [associations]
            symbol:AT3G13226 "AT3G13226" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0006282 "regulation of DNA repair"
            evidence=IEA;ISS] [GO:0007126 "meiosis" evidence=RCA]
            InterPro:IPR003783 Pfam:PF02631 HAMAP:MF_01114 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006282 EMBL:AK227538 IPI:IPI00548441 RefSeq:NP_566448.1
            UniGene:At.39460 ProteinModelPortal:Q0WTL2 SMR:Q0WTL2
            EnsemblPlants:AT3G13226.1 GeneID:820518 KEGG:ath:AT3G13226
            TAIR:At3g13226 eggNOG:NOG324911 HOGENOM:HOG000090330
            InParanoid:Q0WTL2 OMA:KSSKEAC PhylomeDB:Q0WTL2
            ProtClustDB:CLSN2914982 Genevestigator:Q0WTL2 Uniprot:Q0WTL2
        Length = 382

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 132/386 (34%), Positives = 204/386 (52%)

Query:     8 VGLKISPRLEFRGLL-IPWISKNNA--ISCVKGRDYSSSFPVRYVPKKSVKIKESENSVP 64
             +G +++  ++   L  IPW  +++   I C + RDY SS   +YVPKKS KI E   S  
Sbjct:     4 LGFRLAIGIQHHRLFRIPWAKRHSVPRILCSEQRDYCSSGLTKYVPKKSRKITEDLTSQQ 63

Query:    65 ---------VKGLE-RNELRKQPDASGLRTEVSNSGRDVKKPLKIYEPKNSVPVN-GLQR 113
                      V G + +   ++  D S L  +  N              +  + ++ G+  
Sbjct:    64 FDVTRVDHSVLGFQVKGNSKEARDGSFLDLQEENDTGSYTNVSCDDSDEGFMSLDKGIDA 123

Query:   114 NELQKQSDASELRTEVSNSGRDVKTSFASHKKFQNHNRMTNNNILLDAAKQEFGEEISCX 173
             + L      S+++  +  +G D  T F  H + +N   M ++ +  D +  E   E+   
Sbjct:   124 SRLDHSVLGSKVKANIKETGED--TDF--HLRDKNDADMYSD-VSCDDSNDESSNEVR-S 177

Query:   174 XXXXXXXXXXXXXXXXXXXMKILQQKDFYLQAAKARQDAENLAVKLLATRAFTAVEMRKK 233
                                ++  Q K    +A K  QDAE++A++ L  RA++A +++KK
Sbjct:   178 TGYKSTRQHKQAYDKIKLHLEAEQAKSSK-EACKTTQDAEHMAIRYLGLRAYSAADLKKK 236

Query:   234 LNGKKFPSHVIEAVITDFQSRGLINDSLXXXXXXXXXXXXXXXGPRRIKQALFKKGISQT 293
             L GKK+P  V++ VI DFQ RG +NDSL               GPRRIKQALFKKGIS  
Sbjct:   237 LIGKKYPIEVVDKVIDDFQIRGFVNDSLYAESFTRSRWSSLSWGPRRIKQALFKKGISNK 296

Query:   294 DAKKAVNLVFRDGESDE-DQESKL--GMSKHSIDRLFVQASKQWLRSQGAPKETRKSRII 350
             D++ A+ LVF   + +E D+E++L  G+SK ++D+L+VQASK+WL+ +  P ETRK+R+I
Sbjct:   297 DSETAIKLVFEKRQCNEGDEEAELNHGLSKEAVDQLYVQASKRWLQGRDLPTETRKTRVI 356

Query:   351 HWLQYRGFNWCVTSFILKKLESQYPS 376
              WLQYRGFNW V + +LK+LES + S
Sbjct:   357 RWLQYRGFNWGVVTQLLKRLESTHES 382


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      376       341   0.00095  116 3  11 23  0.43    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  204 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.53u 0.16s 28.69t   Elapsed:  00:00:01
  Total cpu time:  28.53u 0.16s 28.69t   Elapsed:  00:00:01
  Start:  Fri May 10 18:10:56 2013   End:  Fri May 10 18:10:57 2013

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