Your job contains 1 sequence.
>017159
MFDGSISMSLQTPNCPPFFLSTVYINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRK
FPGSAAASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVC
NDPALNEELFHASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAW
HGDVSEGCSIPFLHVGECVAKELKEAKLKPLEAGSGVRIGVLATDATLSAGFYQEKLQNQ
GFEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGV
LPKDDPLLKKCIDPMDALARSTVTWARSNKKLTLLLDSQSSAKQCPREQSSALLQFKQLW
KILFSVVVERIIPTQR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017159
(376 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2037743 - symbol:AT1G15410 species:3702 "Arabi... 779 2.1e-77 1
TIGR_CMR|SPO_2662 - symbol:SPO_2662 "aspartate racemase, ... 160 9.5e-09 1
UNIPROTKB|Q81Q00 - symbol:BAS2459 "Aspartate racemase fam... 126 1.0e-05 1
TIGR_CMR|BA_2639 - symbol:BA_2639 "aspartate racemase fam... 126 1.0e-05 1
UNIPROTKB|Q5LLG5 - symbol:Q5LLG5 "Aspartate racemase" spe... 123 2.6e-05 1
TIGR_CMR|SPO_A0062 - symbol:SPO_A0062 "aspartate racemase... 123 2.6e-05 1
TIGR_CMR|CJE_0080 - symbol:CJE_0080 "aspartate racemase, ... 112 0.00050 1
>TAIR|locus:2037743 [details] [associations]
symbol:AT1G15410 species:3702 "Arabidopsis thaliana"
[GO:0006520 "cellular amino acid metabolic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016855 "racemase and epimerase
activity, acting on amino acids and derivatives" evidence=IEA;ISS]
InterPro:IPR015942 InterPro:IPR001920 Pfam:PF01177 EMBL:CP002684
GO:GO:0009507 EMBL:AC007591 GO:GO:0006807 GO:GO:0036361
Gene3D:3.40.50.1860 SUPFAM:SSF53681 UniGene:At.41934
UniGene:At.71257 EMBL:BT002350 IPI:IPI00546030 RefSeq:NP_172993.1
ProteinModelPortal:Q9XI28 SMR:Q9XI28 PRIDE:Q9XI28
EnsemblPlants:AT1G15410.1 GeneID:838111 KEGG:ath:AT1G15410
TAIR:At1g15410 InParanoid:Q9XI28 OMA:IIIPCNT PhylomeDB:Q9XI28
ProtClustDB:CLSN2679471 ArrayExpress:Q9XI28 Genevestigator:Q9XI28
Uniprot:Q9XI28
Length = 330
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 166/327 (50%), Positives = 217/327 (66%)
Query: 8 MSLQTPNCPPFFLSTV-YINKTLSRTRPILSAVVQSSSLLGQSHESGSLHESRK-FPGSA 65
M LQ N P L+ + Y ++ R R + SS+L ES L + +K F S
Sbjct: 1 MYLQIFNNPSHGLAHLCYSSRVSCRVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSE 60
Query: 66 -AASLLRSKSPDSLLNQANTIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPA 124
+ + L S DSLL QANT+GIIGGVS STL F+ KLV +S+ D + PFV+C+DPA
Sbjct: 61 DSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPA 120
Query: 125 LNEELF---HASVHSLKSKTVQLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWH 181
LN+EL S SL + + +NLR+KR +LE+ GA+ I+MPCHI+H W+
Sbjct: 121 LNKELLLYEENSYPSLYHREESTPVDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWY 180
Query: 182 GDVSEGCSIPFLHVGECVXXXXXXXXXXXXXXGSGVRIGVLATDATLSAGFYQEKLQNQG 241
+V EG +P LH+GEC+ G+ +R+GV+AT ATLSAGFYQEKLQ+ G
Sbjct: 181 EEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNG 240
Query: 242 FEVVLPDKATMEHVIIPTIEALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVL 301
FE VLPDKATMEH +IP+IEA+ +DMEGARNLLRI +Q+LLV+AVN V++GSDEM+ +L
Sbjct: 241 FEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLL 300
Query: 302 PKDDPLLKKCIDPMDALARSTVTWARS 328
P DDPLLKKC+DPMDALARS + WA +
Sbjct: 301 PGDDPLLKKCVDPMDALARSAIKWAEN 327
>TIGR_CMR|SPO_2662 [details] [associations]
symbol:SPO_2662 "aspartate racemase, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009066 "aspartate
family amino acid metabolic process" evidence=ISS] [GO:0047689
"aspartate racemase activity" evidence=ISS] InterPro:IPR015942
InterPro:IPR001920 InterPro:IPR004380 InterPro:IPR018187
Pfam:PF01177 PROSITE:PS00923 GO:GO:0006520 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0036361 Gene3D:3.40.50.1860
SUPFAM:SSF53681 TIGRFAMs:TIGR00035 RefSeq:YP_167872.1
ProteinModelPortal:Q5LQ34 GeneID:3194173 KEGG:sil:SPO2662
PATRIC:23378735 HOGENOM:HOG000055550 KO:K01779 OMA:HAFVERI
ProtClustDB:CLSK767352 Uniprot:Q5LQ34
Length = 485
Score = 160 (61.4 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 52/173 (30%), Positives = 84/173 (48%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVXXXXXXXXXXXXXXGSGVRIGV 221
LE+AGA+ I +PC+ +HA+ + + IP + + + G ++ V
Sbjct: 312 LERAGAQAIAIPCNTAHAFVDRIQKNLDIPIISI---LTETARFIGALHPEIG---KVAV 365
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTI---EALNHRDMEG--ARNLLR 276
LAT T+ +G YQ L++QG + VLPD A M+ +++ I + G A L +
Sbjct: 366 LATSGTIQSGLYQSALRDQGLDPVLPD-AGMQEMVMEVIYGPSGVKAGFTTGRCAAQLAQ 424
Query: 277 IGIQLLLVRAVNAVIIGSDEMQGV-LPKDDPLLKKCIDPMDALARSTVTWARS 328
+ I + + A I+G E+ V LP P + IDP + LAR+ V A S
Sbjct: 425 V-IAAMTGQGAQAAILGCTELPLVHLPA--PAAIRLIDPTEVLARACVQAAIS 474
>UNIPROTKB|Q81Q00 [details] [associations]
symbol:BAS2459 "Aspartate racemase family protein"
species:1392 "Bacillus anthracis" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR015942 InterPro:IPR001920
InterPro:IPR004380 InterPro:IPR018187 Pfam:PF01177 PROSITE:PS00924
GO:GO:0006520 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0036361 Gene3D:3.40.50.1860
SUPFAM:SSF53681 HOGENOM:HOG000262146 TIGRFAMs:TIGR00035 KO:K01779
HSSP:O58403 RefSeq:NP_845001.1 RefSeq:YP_019280.1
RefSeq:YP_028719.1 ProteinModelPortal:Q81Q00 DNASU:1088392
EnsemblBacteria:EBBACT00000012788 EnsemblBacteria:EBBACT00000015019
EnsemblBacteria:EBBACT00000022997 GeneID:1088392 GeneID:2816398
GeneID:2849314 KEGG:ban:BA_2639 KEGG:bar:GBAA_2639 KEGG:bat:BAS2459
OMA:IHMRKLI ProtClustDB:CLSK916733
BioCyc:BANT260799:GJAJ-2524-MONOMER
BioCyc:BANT261594:GJ7F-2614-MONOMER Uniprot:Q81Q00
Length = 226
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/147 (24%), Positives = 70/147 (47%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVXXXXXXXXXXXXXXGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L N E ++P D+ + HVI+ + ++ + LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEISKEK-LLQI- 178
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ L+ +++G E+ ++ ++D
Sbjct: 179 TKSLIQNGAEGILLGCTEIPLLISQND 205
>TIGR_CMR|BA_2639 [details] [associations]
symbol:BA_2639 "aspartate racemase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008150
"biological_process" evidence=ND] [GO:0016855 "racemase and
epimerase activity, acting on amino acids and derivatives"
evidence=ISS] InterPro:IPR015942 InterPro:IPR001920
InterPro:IPR004380 InterPro:IPR018187 Pfam:PF01177 PROSITE:PS00924
GO:GO:0006520 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0036361 Gene3D:3.40.50.1860
SUPFAM:SSF53681 HOGENOM:HOG000262146 TIGRFAMs:TIGR00035 KO:K01779
HSSP:O58403 RefSeq:NP_845001.1 RefSeq:YP_019280.1
RefSeq:YP_028719.1 ProteinModelPortal:Q81Q00 DNASU:1088392
EnsemblBacteria:EBBACT00000012788 EnsemblBacteria:EBBACT00000015019
EnsemblBacteria:EBBACT00000022997 GeneID:1088392 GeneID:2816398
GeneID:2849314 KEGG:ban:BA_2639 KEGG:bar:GBAA_2639 KEGG:bat:BAS2459
OMA:IHMRKLI ProtClustDB:CLSK916733
BioCyc:BANT260799:GJAJ-2524-MONOMER
BioCyc:BANT261594:GJ7F-2614-MONOMER Uniprot:Q81Q00
Length = 226
Score = 126 (49.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/147 (24%), Positives = 70/147 (47%)
Query: 162 LEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVXXXXXXXXXXXXXXGSGVRIGV 221
+E++GA C++M + H + +V SIP LH+G+ RIG+
Sbjct: 69 VEKSGADCLLMCSNTVHLFAEEVESAISIPLLHIGDVSAKEMVEQNIK--------RIGL 120
Query: 222 LATDATLSAGFYQEKLQNQGFEVVLP---DKATMEHVIIPTIEALNHRDMEGARNLLRIG 278
L T T+ FY+ +L N E ++P D+ + HVI+ + ++ + LL+I
Sbjct: 121 LGTKQTMEQDFYKSRLANYNIETIIPNEEDRNFIHHVILNELSKGIISEISKEK-LLQI- 178
Query: 279 IQLLLVRAVNAVIIGSDEMQGVLPKDD 305
+ L+ +++G E+ ++ ++D
Sbjct: 179 TKSLIQNGAEGILLGCTEIPLLISQND 205
>UNIPROTKB|Q5LLG5 [details] [associations]
symbol:Q5LLG5 "Aspartate racemase" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0009066 "aspartate family amino acid metabolic
process" evidence=ISS] [GO:0047689 "aspartate racemase activity"
evidence=ISS] InterPro:IPR015942 InterPro:IPR001920
InterPro:IPR004380 Pfam:PF01177 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.50.1860 SUPFAM:SSF53681
TIGRFAMs:TIGR00035 RefSeq:YP_164893.1 ProteinModelPortal:Q5LLG5
GeneID:3196691 KEGG:sil:SPOA0062 PATRIC:23381428
HOGENOM:HOG000262147 OMA:CNVILLG ProtClustDB:CLSK759359
GO:GO:0047689 GO:GO:0009066 Uniprot:Q5LLG5
Length = 232
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 57/242 (23%), Positives = 97/242 (40%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWY--SAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+GI+GG+ +T+ +L+ +A DA+ P + N P + + H + +
Sbjct: 6 VGILGGMGPEATILLQQRLLATVRAADDADHLPLLIDMN-PQVPSRIAHL-IQGTGTDPG 63
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVXXX 202
++Q R LEQAGA + MPC+ +H + + SIP L++
Sbjct: 64 P------TLAQMARG----LEQAGATALGMPCNTAHHYAPAIEAAVSIPLLNM------V 107
Query: 203 XXXXXXXXXXXGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
G R+G+LA+ A AG + L + P+ A I TI+A
Sbjct: 108 SLSVARARALVAPGARVGLLASPAVRMAGVFDAALAEAQLTPLWPEDADRMLTAIRTIKA 167
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGV---LPKDDPLLKKCIDPMDALA 319
+ AR +L + L + + + E + LP P+ ID +D LA
Sbjct: 168 --EGPVPAARAILTAAAEELADKGAALIFVACSEFSLIADSLPSSPPV----IDTVDVLA 221
Query: 320 RS 321
+
Sbjct: 222 EA 223
>TIGR_CMR|SPO_A0062 [details] [associations]
symbol:SPO_A0062 "aspartate racemase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0009066 "aspartate family amino acid
metabolic process" evidence=ISS] [GO:0047689 "aspartate racemase
activity" evidence=ISS] InterPro:IPR015942 InterPro:IPR001920
InterPro:IPR004380 Pfam:PF01177 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.50.1860 SUPFAM:SSF53681
TIGRFAMs:TIGR00035 RefSeq:YP_164893.1 ProteinModelPortal:Q5LLG5
GeneID:3196691 KEGG:sil:SPOA0062 PATRIC:23381428
HOGENOM:HOG000262147 OMA:CNVILLG ProtClustDB:CLSK759359
GO:GO:0047689 GO:GO:0009066 Uniprot:Q5LLG5
Length = 232
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 57/242 (23%), Positives = 97/242 (40%)
Query: 85 IGIIGGVSVSSTLNFLGKLVWY--SAKDAEECPPFVVCNDPALNEELFHASVHSLKSKTV 142
+GI+GG+ +T+ +L+ +A DA+ P + N P + + H + +
Sbjct: 6 VGILGGMGPEATILLQQRLLATVRAADDADHLPLLIDMN-PQVPSRIAHL-IQGTGTDPG 63
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVXXX 202
++Q R LEQAGA + MPC+ +H + + SIP L++
Sbjct: 64 P------TLAQMARG----LEQAGATALGMPCNTAHHYAPAIEAAVSIPLLNM------V 107
Query: 203 XXXXXXXXXXXGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHVIIPTIEA 262
G R+G+LA+ A AG + L + P+ A I TI+A
Sbjct: 108 SLSVARARALVAPGARVGLLASPAVRMAGVFDAALAEAQLTPLWPEDADRMLTAIRTIKA 167
Query: 263 LNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGV---LPKDDPLLKKCIDPMDALA 319
+ AR +L + L + + + E + LP P+ ID +D LA
Sbjct: 168 --EGPVPAARAILTAAAEELADKGAALIFVACSEFSLIADSLPSSPPV----IDTVDVLA 221
Query: 320 RS 321
+
Sbjct: 222 EA 223
>TIGR_CMR|CJE_0080 [details] [associations]
symbol:CJE_0080 "aspartate racemase, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR015942 InterPro:IPR001920
InterPro:IPR004380 Pfam:PF01177 GO:GO:0006520 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0036361 Gene3D:3.40.50.1860
SUPFAM:SSF53681 eggNOG:COG1794 HOGENOM:HOG000262146 OMA:ATRYTME
TIGRFAMs:TIGR00035 RefSeq:YP_178104.1 ProteinModelPortal:Q5HX81
STRING:Q5HX81 GeneID:3230843 KEGG:cjr:CJE0080 PATRIC:20041867
ProtClustDB:CLSK878636 BioCyc:CJEJ195099:GJC0-84-MONOMER
Uniprot:Q5HX81
Length = 231
Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
Identities = 53/229 (23%), Positives = 96/229 (41%)
Query: 84 TIGIIGGVSVSSTLNFLGKLVWYSAKDAEECPPFVVCNDPALNE-ELFHASVHSLKSKTV 142
TIGIIGG+S ST+ + K + + D + +LN ++ SV+ + + +
Sbjct: 3 TIGIIGGMSFESTITYY-KTINQAINDKLK----------SLNSAKILLYSVNFEEIENL 51
Query: 143 QLDHIRGAVSQNLRHKRAFLEQAGARCIVMPCHISHAWHGDVSEGCSIPFLHVGECVXXX 202
Q +Q L LE AGA I++ + H ++ + +IP LH+ +
Sbjct: 52 QSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHIAKSSAKA 111
Query: 203 XXXXXXXXXXXGSGVRIGVLATDATLSAGFYQEKLQNQGFEVVLPDKATMEHV--IIPTI 260
+IG+L T T++ FY++ L + V++P ++ V II
Sbjct: 112 LKQENIQ--------KIGLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDIIFNE 163
Query: 261 EALNHRDMEGARNLLRIGIQLLLVRAVNAVIIGSDEMQGVLPKDDPLLK 309
E L I I+ L + V++ E+ ++ K+D +K
Sbjct: 164 LCKGEIKQESKEKYLNI-IKKLQEKGAKGVLLACTEIGLLISKNDTNIK 211
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 376 362 0.00082 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 615 (65 KB)
Total size of DFA: 231 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.40u 0.14s 26.54t Elapsed: 00:00:01
Total cpu time: 26.40u 0.15s 26.55t Elapsed: 00:00:01
Start: Fri May 10 18:12:21 2013 End: Fri May 10 18:12:22 2013